Citrus Sinensis ID: 025705

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
METTSSSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETKN
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHccccccccccHHHHHHHHHHHHHHHHHHHccccHHHcccccccccccccEEEEEccccccHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHHHHHcccccEEEEcccEEEcccccccccccHHHHHcHcHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHcccEccHHccccccccccccHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mettssssstsspsaAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILAShlqnplplppvndltcivtgstsgIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEewsgkglplniEAMELDLLSLDSVVRFseawngrlgplhVLINnagifsigepqkfskdgyeehMQVNHLAPALLSILLfpslirgspsriiNVNSVMHYVGfvdtedmnvvsGRRKYtslmgysgskLAQVKLETKN
Flexible Loop (DISEMBL)
mettssssstsspsaaeLISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYtslmgysgsklaqvkletkn
Low Complexity Region (SEG)
MEttssssstsspsAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETKN
Disordered region (IsUnstruct)
**************************ALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGY**************
Disordered Region (DISOPRED)
***********************RKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK*
Disordered Region (DISEMBL)
*********************SKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETKN
Disordered Region (DISPRO)
*********************SKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETKN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METTSSSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHxxxxxxxxxxxxxxxxxxxxxWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	249	2.2.26 [Sep-21-2011]
Q91WL8	414	WW domain-containing oxid	yes	no	0.670	0.403	0.406	6e-26
Q9NZC7	414	WW domain-containing oxid	yes	no	0.670	0.403	0.390	1e-25
Q5F389	414	WW domain-containing oxid	yes	no	0.678	0.408	0.388	3e-25
Q5R9W5	414	WW domain-containing oxid	yes	no	0.670	0.403	0.390	3e-25
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.686	0.541	0.391	1e-24
Q8N5I4	330	Dehydrogenase/reductase S	no	no	0.775	0.584	0.370	2e-22
A2RVM0	322	Short-chain dehydrogenase	no	no	0.690	0.534	0.371	5e-22
Q8VBZ0	335	Dehydrogenase/reductase S	no	no	0.702	0.522	0.382	2e-20
Q803A8	412	WW domain-containing oxid	no	no	0.702	0.424	0.370	4e-20
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.666	0.522	0.365	1e-19

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  117 bits (294), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 100/182 (54%), Gaps = 15/182 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+ SGIG E A+  A  GAHV++A RNL  A+E + +  EEW        +EAM LD
Sbjct: 128 LVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWHKA----KVEAMTLD 183

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L  L SV  F+EA+  +   LHVL+ NAG F++  P   +KDG E   QVNHL    L  
Sbjct: 184 LAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFAL--PWGLTKDGLETTFQVNHLGHFYLVQ 241

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN-------VVSGRRKYTSLMGYSGSKLA 241
           LL   L R SP+R+I V+S  H   F D  D +       +   R  Y +++ Y+ SKL 
Sbjct: 242 LLQDVLCRSSPARVIVVSSESHR--FTDINDSSGKLDLSRLSPPRSDYWAMLAYNRSKLC 299

Query: 242 QV 243
            +
Sbjct: 300 NI 301

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.
Mus musculus (taxid: 10090)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  116 bits (291), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 15/182 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+ SGIG E A+  A  GAHV++A RN+  A+E + +  EEW        +EAM LD
Sbjct: 128 VVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKA----KVEAMTLD 183

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L  L SV  F+EA+  +  PLHVL+ NA  F++  P   +KDG E   QVNHL    L  
Sbjct: 184 LALLRSVQHFAEAFKAKNVPLHVLVCNAATFAL--PWSLTKDGLETTFQVNHLGHFYLVQ 241

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTED-------MNVVSGRRKYTSLMGYSGSKLA 241
           LL   L R +P+R+I V+S  H   F D  D         +   +  Y +++ Y+ SKL 
Sbjct: 242 LLQDVLCRSAPARVIVVSSESHR--FTDINDSLGKLDFSRLSPTKNDYWAMLAYNRSKLC 299

Query: 242 QV 243
            +
Sbjct: 300 NI 301

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  115 bits (288), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 11/180 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           I+TG+ SGIG E A+  A  GA+V++A RN+   N+ +Q+  EEW        +EAM LD
Sbjct: 128 IITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQRILEEWH----KAKVEAMTLD 183

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L SL SV  F+EA+  +  PLH+L+ NA IF  G     ++DG E   QVNHL    L  
Sbjct: 184 LASLRSVQNFAEAFKSKNMPLHILVCNAAIF--GSSWCLTEDGLESTFQVNHLGHFYLVQ 241

Query: 189 LLFPSLIRGSPSRIINVNSVMH-YVGFVDTE---DMNVVS-GRRKYTSLMGYSGSKLAQV 243
           LL   L R SP+R++ V+S  H +    D+    D +++S  +++Y +++ Y+ SKL  +
Sbjct: 242 LLEDILRRSSPARVVVVSSESHRFTEIKDSSGKLDFSLLSPSKKEYWAMLAYNRSKLCNI 301

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  115 bits (287), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 15/182 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+ SGIG E A+  A  GAHV++A RN+  A+E + +  EEW        +EA+ LD
Sbjct: 128 VVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKA----KVEAVTLD 183

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L  L SV  F+EA+  +  PLHVL+ NA  F++  P   +KDG E   QVNHL    L  
Sbjct: 184 LALLRSVQHFAEAFKAKNVPLHVLVCNAATFAL--PWSLTKDGLETTFQVNHLGHFYLVQ 241

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTED-------MNVVSGRRKYTSLMGYSGSKLA 241
           LL   L R +P+R+I V+S  H   F D  D         +   +  Y +++ Y+ SKL 
Sbjct: 242 LLQDVLCRSAPARVIVVSSESHR--FTDINDSLGKLDFSRLSPTKNDYWAMLAYNRSKLC 299

Query: 242 QV 243
            V
Sbjct: 300 NV 301

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  113 bits (282), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 13/184 (7%)

Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP-LNIEA 124
           LT IVTG++SGIG E  R LA  GAHV+M VRN+ AA ++     ++   K +P   ++A
Sbjct: 31  LTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMVAAKDV-----KDTILKDIPSAKVDA 85

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +ELDL SLDSV +F+  +N    PL++LINNAGI +   P K SKD  E     NH+   
Sbjct: 86  IELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMAC--PFKLSKDNIELQFATNHIGHF 143

Query: 185 LLSILLFPSLIRGS-----PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
           LL+ LL  ++ + +       RI+NV S  H   + +    + ++ +  Y +   Y  SK
Sbjct: 144 LLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKINDQSSYNNWRAYGQSK 203

Query: 240 LAQV 243
           LA V
Sbjct: 204 LANV 207

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 15/208 (7%)

Query: 40  VIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL 99
           VI   L +R     L+ P+  PP  D   IVTG T GIG   A+ LA  G HV++A  N 
Sbjct: 20  VILAQLLRRCRGGFLE-PV-FPPRPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNND 77

Query: 100 KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF 159
             A +++ K +EE     L   +E +  DL S+ S+ +F + +  +  PLHVLINNAG+ 
Sbjct: 78  SKAKQVVSKIKEE----TLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVM 133

Query: 160 SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-GSP---SRIINVNSVMHYVGFV 215
            +  PQ+ ++DG+EEH  +N+L   LL+ LL  +L   GSP   +R++ V+S  HYV  +
Sbjct: 134 MV--PQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATHYVAEL 191

Query: 216 DTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           + +D+   +    Y+    Y+ SKLA V
Sbjct: 192 NMDDLQSSAC---YSPHAAYAQSKLALV 216

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  104 bits (260), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 99/183 (54%), Gaps = 11/183 (6%)

Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           LT IVTG++SGIG E AR L+  G HVVMAVRN  +  ++ +   ++  G  L    + M
Sbjct: 30  LTAIVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKL----DVM 85

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           ELDL S+ SV +F+  +     PL++LINNAGI +   P   SKD  E     NHL   L
Sbjct: 86  ELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMAC--PFMLSKDNIELQFATNHLGHFL 143

Query: 186 LSILLFPSLIRGS-----PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKL 240
           L+ LL  ++   S       RI+N++S  H   + +    + ++ +  Y+S+  Y  SKL
Sbjct: 144 LTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQSKL 203

Query: 241 AQV 243
             V
Sbjct: 204 CNV 206

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VBZ0|DHRSX_MOUSE Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=2 SV=2

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 98/188 (52%), Gaps = 13/188 (6%)

Query: 56  NPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSG 115
            P  LPP      IVTG+T+GIGR  ARQLA  G  VV+A  +     E++   + E   
Sbjct: 34  RPPVLPPQPGRVAIVTGATAGIGRSTARQLARLGMCVVVAGNDEHRGQEVVSSIRAEMGS 93

Query: 116 KGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH 175
                    + LDL SL SV  F+  +     PLH+L+NNAG+    EP+  ++DG+E H
Sbjct: 94  D----RAHFLPLDLASLASVRGFARDFQALGLPLHLLVNNAGVML--EPRAETEDGFERH 147

Query: 176 MQVNHLAPALLSILLF----PSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTS 231
           + VN L   LL++LL      S   G  SR++ V S  HYVG VD  D++   GR  Y+ 
Sbjct: 148 LGVNFLGHFLLTLLLLPALRASGAEGRGSRVVTVGSATHYVGTVDMADLH---GRHAYSP 204

Query: 232 LMGYSGSK 239
              Y+ SK
Sbjct: 205 YAAYAQSK 212

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 11/186 (5%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           ++D   IVTG+ SGIG E AR  A  GAHV++A RN   A++       EWS       +
Sbjct: 119 LSDKVIIVTGANSGIGFETARSFALHGAHVILACRNQSRASKAASLIMGEWSKA----RV 174

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
           E + LDL SL SV +F+E +     PLHVL+ NA + S  +P + ++DG+E   Q+ HL 
Sbjct: 175 EVLPLDLASLRSVRQFAELFKATKLPLHVLVCNAAVCS--QPWRLTEDGFESTFQICHLG 232

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMH-YVGFVDTE---DMNVVSGRRK-YTSLMGYSG 237
             LL  LL   L   +P+R++ V+S  H +   +D+    D++++S  +K Y SL+ Y+ 
Sbjct: 233 HFLLVQLLQDVLRLSAPARVVVVSSESHRFTDLLDSCGNLDLDLLSPPQKNYWSLLAYNR 292

Query: 238 SKLAQV 243
           +KL  +
Sbjct: 293 AKLCNL 298

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 9/175 (5%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+ +GIG+E A++LA+ GA V +A R+++   EL+ K  +  +G    L     +LD
Sbjct: 45  VVTGANTGIGKETAKELAQRGARVYLACRDVEKG-ELVAKEIQTTTGNQQVL---VRKLD 100

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L    S+  F++ +      LHVLINNAG+     P   + DG+E H+ VNHL   LL+ 
Sbjct: 101 LSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMC--PYSKTADGFEMHIGVNHLGHFLLTH 158

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           LL   L   +PSRI+NV+S+ H++G +   ++    G + Y + + Y  SKLA +
Sbjct: 159 LLLEKLKESAPSRIVNVSSLAHHLGRIHFHNLQ---GEKFYNAGLAYCHSKLANI 210

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
18138085	385	forever young oxidoreductase [Solanum bu	0.963	0.623	0.805	1e-108
18138083	385	forever young oxidoreductase [Solanum ly	0.967	0.625	0.797	1e-108
449439227	390	PREDICTED: WW domain-containing oxidored	0.887	0.566	0.873	1e-103
255557092	367	short-chain dehydrogenase, putative [Ric	0.879	0.596	0.844	1e-101
356531044	378	PREDICTED: retinol dehydrogenase 11-like	0.955	0.629	0.765	2e-99
225456449	371	PREDICTED: retinol dehydrogenase 11 [Vit	0.915	0.614	0.864	2e-99
356560045	377	PREDICTED: retinol dehydrogenase 11-like	0.943	0.623	0.762	1e-98
110741905	376	forever young gene [Arabidopsis thaliana	0.939	0.622	0.785	2e-97
79487049	376	Rossmann-fold NAD(P)-binding domain-cont	0.939	0.622	0.785	2e-97
12004621	376	forever young oxidoreductase [Arabidopsi	0.939	0.622	0.785	2e-97

>gi|18138085|gb|AAL60069.1|AF216836_1 forever young oxidoreductase [Solanum bulbocastanum]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/242 (80%), Positives = 217/242 (89%), Gaps = 2/242 (0%)

Query: 2   ETTSSSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLP 61
           E     ++TSS +   L  K+ +K+ALGWMEWLRGW Y++YEMLFQRILASHLQNP+PLP
Sbjct: 5   EAEKKKNTTSSEAKQPL--KTAKKKALGWMEWLRGWFYLVYEMLFQRILASHLQNPMPLP 62

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P+ND+TCIVTGSTSGIGREIARQLAE+GAHVVMAVR+   A ELI+KWQEEWSGKGLPLN
Sbjct: 63  PINDVTCIVTGSTSGIGREIARQLAEAGAHVVMAVRSTNRAQELIRKWQEEWSGKGLPLN 122

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           IE MELDLLSLDSV RF+EAWN R+ P+HVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL
Sbjct: 123 IEVMELDLLSLDSVARFAEAWNSRMAPVHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 182

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           APA+LSILL PSLIRGSPSRIINVNS MHYVGFVD EDMNVVSG+RKYTS++GY GSKLA
Sbjct: 183 APAMLSILLLPSLIRGSPSRIINVNSTMHYVGFVDPEDMNVVSGKRKYTSVVGYGGSKLA 242

Query: 242 QV 243
           Q+
Sbjct: 243 QI 244

Source: Solanum bulbocastanum

Species: Solanum bulbocastanum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18138083|gb|AAL60068.1|AF216835_1 forever young oxidoreductase [Solanum lycopersicum]

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/242 (79%), Positives = 216/242 (89%), Gaps = 1/242 (0%)

Query: 2   ETTSSSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLP 61
           E      +TSS  A + + K+ +K+ LGWMEWLRGW Y++YEMLFQRILASHLQNP+PLP
Sbjct: 4   EEAEKKKNTSSSEAKQPL-KTAKKKTLGWMEWLRGWFYLVYEMLFQRILASHLQNPMPLP 62

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P+ND+TCIVTGSTSGIGREIARQLAE+GAHVVMAVR+   A ELI+KWQEEWSGKGLPLN
Sbjct: 63  PINDVTCIVTGSTSGIGREIARQLAEAGAHVVMAVRSTNRAQELIRKWQEEWSGKGLPLN 122

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           IE MELDLLSLDSV RF+EAWN R+ P+HVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL
Sbjct: 123 IEVMELDLLSLDSVARFAEAWNARMAPVHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 182

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           APA+LSILL PSLIRGSPSRI+NVNS MHYVGFVD EDMNVVSG+RKYTS++GY GSKLA
Sbjct: 183 APAMLSILLLPSLIRGSPSRIVNVNSTMHYVGFVDPEDMNVVSGKRKYTSVVGYGGSKLA 242

Query: 242 QV 243
           Q+
Sbjct: 243 QI 244

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439227|ref|XP_004137388.1| PREDICTED: WW domain-containing oxidoreductase-like [Cucumis sativus] gi|449507149|ref|XP_004162946.1| PREDICTED: WW domain-containing oxidoreductase-like [Cucumis sativus]

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/221 (87%), Positives = 209/221 (94%)

Query: 27  ALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLA 86
           ALGW+EWLRGW+YVI+EMLFQRI+ASHLQNP+PLPPVNDLTCIVTGSTSGIGREIARQLA
Sbjct: 32  ALGWVEWLRGWMYVIHEMLFQRIMASHLQNPMPLPPVNDLTCIVTGSTSGIGREIARQLA 91

Query: 87  ESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL 146
           ESGAHVVMAVRN KAA +LIQKWQ EWSG GLPLNIE M+LDLLSLDSVVRF+EA+N R+
Sbjct: 92  ESGAHVVMAVRNPKAALDLIQKWQNEWSGMGLPLNIEVMQLDLLSLDSVVRFAEAYNARM 151

Query: 147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVN 206
           GPLHVLINNAGIFSIGEPQKFSKDGYEEH+QVNHLAPALLSILL PSLIRGSPSRIINVN
Sbjct: 152 GPLHVLINNAGIFSIGEPQKFSKDGYEEHLQVNHLAPALLSILLLPSLIRGSPSRIINVN 211

Query: 207 SVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLET 247
           SVMHYVGFVDTEDMN+VS +RK+TSL+GYS SKLAQV   +
Sbjct: 212 SVMHYVGFVDTEDMNLVSSKRKFTSLVGYSSSKLAQVMFSS 252

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557092|ref|XP_002519578.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223541236|gb|EEF42789.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/219 (84%), Positives = 206/219 (94%)

Query: 25  KEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQ 84
           K  LGW+EWLRGW+YV++EMLFQRI+ASHLQNPLPLPPVN LTCIVTGSTSGIG EIARQ
Sbjct: 8   KRGLGWIEWLRGWMYVVHEMLFQRIMASHLQNPLPLPPVNGLTCIVTGSTSGIGTEIARQ 67

Query: 85  LAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG 144
           LAE+GAHV+MAVRN K A+ELI+KWQ EWSG GLPLNIE MELDLLSL+SVV+F+EAWN 
Sbjct: 68  LAEAGAHVIMAVRNTKGAHELIRKWQNEWSGLGLPLNIEVMELDLLSLESVVKFAEAWNA 127

Query: 145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIIN 204
           R GPLHVLINNAGIFSIGEPQKFSKDGYE+HMQVNHLAPALLSILL PSL++GSPSRI+N
Sbjct: 128 RSGPLHVLINNAGIFSIGEPQKFSKDGYEQHMQVNHLAPALLSILLLPSLVKGSPSRIVN 187

Query: 205 VNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           VNSVMHYVGFVDTEDMNV++G+RKYTSL+GY+ SKLAQV
Sbjct: 188 VNSVMHYVGFVDTEDMNVITGKRKYTSLVGYASSKLAQV 226

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531044|ref|XP_003534088.1| PREDICTED: retinol dehydrogenase 11-like [Glycine max]

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 186/243 (76%), Positives = 214/243 (88%), Gaps = 5/243 (2%)

Query: 1   METTSSSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPL 60
           M TT+SSSS  +P+     +K  +KE LGW+EWLRGW Y++YEMLFQRI+ASHL NP+PL
Sbjct: 1   MATTTSSSSEEAPN-----TKKNKKERLGWIEWLRGWFYLVYEMLFQRIMASHLHNPMPL 55

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           PPVNDLTCIVTGSTSGIG EIARQLA+SGAHVVMAVRN KAA ELIQKWQ +  G  +PL
Sbjct: 56  PPVNDLTCIVTGSTSGIGLEIARQLAQSGAHVVMAVRNTKAAQELIQKWQVDSEGLSIPL 115

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
           N+E M++DLLSLDSV RF+EAWN R  PLHVLINNAGIFSIGEPQKFSKDGYE+H+QVNH
Sbjct: 116 NVEVMQVDLLSLDSVTRFAEAWNARSAPLHVLINNAGIFSIGEPQKFSKDGYEQHLQVNH 175

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKL 240
           LAPALLSILL PSLIRGSPSRI+NVNS+MH+VGFVDTEDMNV SG+RK++SL+GYS SKL
Sbjct: 176 LAPALLSILLLPSLIRGSPSRIVNVNSIMHHVGFVDTEDMNVTSGKRKFSSLVGYSSSKL 235

Query: 241 AQV 243
           A++
Sbjct: 236 AEI 238

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456449|ref|XP_002284398.1| PREDICTED: retinol dehydrogenase 11 [Vitis vinifera] gi|297734487|emb|CBI15734.3| unnamed protein product [Vitis vinifera]

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 197/228 (86%), Positives = 210/228 (92%)

Query: 20  SKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGR 79
           S S  K+ LGWMEWLRGWLYVIYEMLFQRI ASHLQNPLPLPP++DLTCI+TGSTSGIG 
Sbjct: 6   SSSGGKQGLGWMEWLRGWLYVIYEMLFQRISASHLQNPLPLPPLHDLTCIITGSTSGIGL 65

Query: 80  EIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS 139
           +IARQLAE+GAHVVMAVRN KAAN+LIQKWQ EWSGKGLPLNIE MELDLLSLDSV RF 
Sbjct: 66  QIARQLAEAGAHVVMAVRNSKAANDLIQKWQSEWSGKGLPLNIEVMELDLLSLDSVARFC 125

Query: 140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP 199
           EAWN R  PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILL PSLIRGSP
Sbjct: 126 EAWNARSAPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLLPSLIRGSP 185

Query: 200 SRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLET 247
           SRI+NVNSVMHY+GFVDTEDMNVVSG+RKYTSL+GYS SKLAQV+  +
Sbjct: 186 SRIVNVNSVMHYIGFVDTEDMNVVSGKRKYTSLVGYSSSKLAQVQFSS 233

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560045|ref|XP_003548306.1| PREDICTED: retinol dehydrogenase 11-like [Glycine max]

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 183/240 (76%), Positives = 212/240 (88%), Gaps = 5/240 (2%)

Query: 4   TSSSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPV 63
           T+SSSS  +P+     +K  +KE LGW+EWLRGW YV+YEMLFQRI+ASHL NP+PLPPV
Sbjct: 3   TTSSSSEEAPN-----TKKNKKECLGWIEWLRGWFYVVYEMLFQRIMASHLHNPMPLPPV 57

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           NDLTCIVTGSTSGIG EIARQLA+SGAHVVMAVRN KAA ELIQKWQ +  G  +PLN+E
Sbjct: 58  NDLTCIVTGSTSGIGLEIARQLAQSGAHVVMAVRNTKAAQELIQKWQVDSEGLSIPLNVE 117

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            M++DLLSLDSV RF+EAWN R  PLHVLINNAGIFSIGEPQKFSKDGYE+H+QVNHLAP
Sbjct: 118 VMQVDLLSLDSVTRFAEAWNARSAPLHVLINNAGIFSIGEPQKFSKDGYEQHLQVNHLAP 177

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           ALLSILL PSLIRGSPSRI+NVNS+MH+VGFVDTEDMN+ SG+RK++S++GYS SKLA++
Sbjct: 178 ALLSILLLPSLIRGSPSRIVNVNSIMHHVGFVDTEDMNLTSGKRKFSSMVGYSSSKLAEI 237

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110741905|dbj|BAE98894.1| forever young gene [Arabidopsis thaliana]

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 187/238 (78%), Positives = 211/238 (88%), Gaps = 4/238 (1%)

Query: 6   SSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVND 65
           S  +TSSPS A     +K+K+ LGWMEW+RGW  V  E+LFQRI ASHL+NPLPLP VND
Sbjct: 2   SDETTSSPSPA----PAKKKQNLGWMEWMRGWSSVFGEILFQRITASHLENPLPLPSVND 57

Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           LTC+VTGSTSGIGRE ARQLAE+GAHVVMAVRN KAA ELI +WQ EWSGKGLPLNIEAM
Sbjct: 58  LTCVVTGSTSGIGRETARQLAEAGAHVVMAVRNTKAAQELILQWQNEWSGKGLPLNIEAM 117

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           E+DLLSLDSV RF+EA+N RLGPLHVLINNAG+F++GE QKFS++GYE+HMQVNHLAPAL
Sbjct: 118 EIDLLSLDSVARFAEAFNARLGPLHVLINNAGMFAMGEEQKFSEEGYEQHMQVNHLAPAL 177

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           LS+LL PSLIRGSPSRIINVNSVMH VGFVD +DMNVVSGRRKY+SL+GYS SKLAQ+
Sbjct: 178 LSVLLLPSLIRGSPSRIINVNSVMHSVGFVDPDDMNVVSGRRKYSSLIGYSSSKLAQI 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79487049|ref|NP_194506.4| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332659990|gb|AEE85390.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 187/238 (78%), Positives = 211/238 (88%), Gaps = 4/238 (1%)

Query: 6   SSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVND 65
           S  +TSSPS A     +K+K+ LGWMEW+RGW  V  E+LFQRI ASHL+NPLPLP VND
Sbjct: 2   SDETTSSPSPA----PAKKKQNLGWMEWMRGWSSVFGEILFQRITASHLENPLPLPSVND 57

Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           LTC+VTGSTSGIGRE ARQLAE+GAHVVMAVRN KAA ELI +WQ EWSGKGLPLNIEAM
Sbjct: 58  LTCVVTGSTSGIGRETARQLAEAGAHVVMAVRNTKAAQELILQWQNEWSGKGLPLNIEAM 117

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           E+DLLSLDSV RF+EA+N RLGPLHVLINNAG+F++GE QKFS++GYE+HMQVNHLAPAL
Sbjct: 118 EIDLLSLDSVARFAEAFNARLGPLHVLINNAGMFAMGEAQKFSEEGYEQHMQVNHLAPAL 177

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           LS+LL PSLIRGSPSRIINVNSVMH VGFVD +DMNVVSGRRKY+SL+GYS SKLAQ+
Sbjct: 178 LSVLLLPSLIRGSPSRIINVNSVMHSVGFVDPDDMNVVSGRRKYSSLIGYSSSKLAQI 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12004621|gb|AAG44120.1|AF217275_1 forever young oxidoreductase [Arabidopsis thaliana]

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 187/238 (78%), Positives = 211/238 (88%), Gaps = 4/238 (1%)

Query: 6   SSSSTSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVND 65
           S  +TSSPS A     +K+K+ LGWMEW+RGW  V  E+LFQRI ASHL+NPLPLP VND
Sbjct: 2   SDETTSSPSPA----PAKKKQNLGWMEWMRGWSSVFGEILFQRITASHLENPLPLPSVND 57

Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           LTC+VTGSTSGIGRE ARQLAE+GAHVVMAVRN KAA ELI +WQ EWSGKGLPLNIEAM
Sbjct: 58  LTCVVTGSTSGIGRETARQLAEAGAHVVMAVRNTKAAQELILQWQNEWSGKGLPLNIEAM 117

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           E+DLLSLDSV RF+EA+N RLGPLHVLINNAG+F++GE QKFS++GYE+HMQVNHLAPAL
Sbjct: 118 EIDLLSLDSVARFAEAFNARLGPLHVLINNAGMFAMGEAQKFSEEGYEQHMQVNHLAPAL 177

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           LS+LL PSLIRGSPSRIINVNSVMH VGFVD +DMNVVSGRRKY+SL+GYS SKLAQ+
Sbjct: 178 LSVLLLPSLIRGSPSRIINVNSVMHSVGFVDPDDMNVVSGRRKYSSLIGYSSSKLAQI 235

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
TAIR|locus:2137772	376	FEY "FOREVER YOUNG" [Arabidops	0.891	0.590	0.810	7.6e-96
TAIR|locus:2163741	375	AT5G53090 [Arabidopsis thalian	0.887	0.589	0.814	3.3e-95
TAIR|locus:2163751	364	AT5G53100 [Arabidopsis thalian	0.887	0.607	0.757	1.2e-88
FB|FBgn0033204	300	CG2065 [Drosophila melanogaste	0.666	0.553	0.394	5.2e-26
ZFIN|ZDB-GENE-060825-39	336	zgc:153441 "zgc:153441" [Danio	0.678	0.502	0.389	8.4e-26
MGI|MGI:2181510	335	Dhrsx "dehydrogenase/reductase	0.702	0.522	0.405	1.1e-25
UNIPROTKB|Q5F389	414	WWOX "WW domain-containing oxi	0.678	0.408	0.394	1.4e-25
UNIPROTKB|Q8N5I4	330	DHRSX "Dehydrogenase/reductase	0.775	0.584	0.370	2.2e-25
MGI|MGI:1931237	414	Wwox "WW domain-containing oxi	0.678	0.408	0.416	2.2e-25
ZFIN|ZDB-GENE-070912-611	292	si:dkey-94e7.2 "si:dkey-94e7.2	0.690	0.589	0.386	4.6e-25

TAIR|locus:2137772 FEY "FOREVER YOUNG" [Arabidopsis thaliana (taxid:3702)]

 Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
 Identities = 180/222 (81%), Positives = 203/222 (91%)

Query:    22 SKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREI 81
             +K+K+ LGWMEW+RGW  V  E+LFQRI ASHL+NPLPLP VNDLTC+VTGSTSGIGRE 
Sbjct:    14 AKKKQNLGWMEWMRGWSSVFGEILFQRITASHLENPLPLPSVNDLTCVVTGSTSGIGRET 73

Query:    82 ARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA 141
             ARQLAE+GAHVVMAVRN KAA ELI +WQ EWSGKGLPLNIEAME+DLLSLDSV RF+EA
Sbjct:    74 ARQLAEAGAHVVMAVRNTKAAQELILQWQNEWSGKGLPLNIEAMEIDLLSLDSVARFAEA 133

Query:   142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSR 201
             +N RLGPLHVLINNAG+F++GE QKFS++GYE+HMQVNHLAPALLS+LL PSLIRGSPSR
Sbjct:   134 FNARLGPLHVLINNAGMFAMGEAQKFSEEGYEQHMQVNHLAPALLSVLLLPSLIRGSPSR 193

Query:   202 IINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
             IINVNSVMH VGFVD +DMNVVSGRRKY+SL+GYS SKLAQ+
Sbjct:   194 IINVNSVMHSVGFVDPDDMNVVSGRRKYSSLIGYSSSKLAQI 235

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0010073 "meristem maintenance" evidence=IMP

TAIR|locus:2163741 AT5G53090 [Arabidopsis thaliana (taxid:3702)]

 Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
 Identities = 180/221 (81%), Positives = 200/221 (90%)

Query:    23 KRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIA 82
             K+KE LGW+E ++GW  V +E LFQR +ASHLQNPLPLP +N LTCIVTGSTSGIGRE A
Sbjct:    14 KKKEGLGWIESIKGWSCVFHEFLFQRFMASHLQNPLPLPSLNHLTCIVTGSTSGIGRETA 73

Query:    83 RQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW 142
             RQLAE+GA VVMAVRN KAA+ELIQ+WQ+EWSGKG+PLN+EAMELDLLSLDSVV F   W
Sbjct:    74 RQLAEAGARVVMAVRNTKAAHELIQQWQKEWSGKGIPLNLEAMELDLLSLDSVVGFCNLW 133

Query:   143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRI 202
             N RL PLHVLINNAGIFS+GE QKFSKDGYE+HMQVNHLAPALLS+LL PSLIRGSPSRI
Sbjct:   134 NARLSPLHVLINNAGIFSMGEEQKFSKDGYEQHMQVNHLAPALLSLLLLPSLIRGSPSRI 193

Query:   203 INVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
             INVNSVMHYVGFVD +DMNVVSG+RK+TSL+GYSGSKLAQV
Sbjct:   194 INVNSVMHYVGFVDPDDMNVVSGKRKFTSLVGYSGSKLAQV 234

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2163751 AT5G53100 [Arabidopsis thaliana (taxid:3702)]

 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 169/223 (75%), Positives = 194/223 (86%)

Query:    23 KRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIA 82
             K+ + LGW++W+RGW  V+ E+L QRI+ASHLQ P  LPP+N LTCIVTGSTSGIG E A
Sbjct:     2 KKNDGLGWIQWMRGWFNVVQEILLQRIMASHLQIPFHLPPLNHLTCIVTGSTSGIGSETA 61

Query:    83 RQLAESGAHVVMAVRNLKAANELIQKWQEEWS--GKGLPLNIEAMELDLLSLDSVVRFSE 140
             RQLAE+GAHVVMAVRN+KAA+ELIQ+WQ +WS  G+GLPLNI+AMELDLLSLDSVVRFS 
Sbjct:    62 RQLAEAGAHVVMAVRNIKAAHELIQQWQTKWSASGEGLPLNIQAMELDLLSLDSVVRFSN 121

Query:   141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPS 200
             AWN RL PLHVLINNAG+F++G  QKFS+DGYE+HMQVNHLAPALLS+LL PSLIR S S
Sbjct:   122 AWNARLAPLHVLINNAGMFAMGGAQKFSEDGYEQHMQVNHLAPALLSLLLLPSLIRASRS 181

Query:   201 RIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
             RIINVNSVMHYVGFVD  DMN VSG+RK++SL  YS SKLAQV
Sbjct:   182 RIINVNSVMHYVGFVDPNDMNFVSGKRKFSSLSAYSSSKLAQV 224

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

FB|FBgn0033204 CG2065 [Drosophila melanogaster (taxid:7227)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 69/175 (39%), Positives = 104/175 (59%)

Query:    69 IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
             IVTG+ +GIG+E   ++A+ G  V MA R++    +  Q    E + +    NI + ELD
Sbjct:    18 IVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNNQ----NIFSRELD 73

Query:   129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
             L SL+S+ +F+  +      LHVLINNAG+     P+  +KDG+E  + VNH+   LL+ 
Sbjct:    74 LSSLESIRKFAAGFKKEQDKLHVLINNAGVMHC--PRTLTKDGFEMQLGVNHMGHFLLTH 131

Query:   189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
             LL   L + +PSRI+NV+S++H  GF+ T D+N     + Y+ +  YS SKLA V
Sbjct:   132 LLLDVLKKTAPSRIVNVSSLVHTQGFIKTADLN---SEKSYSRIGAYSQSKLANV 183

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

ZFIN|ZDB-GENE-060825-39 zgc:153441 "zgc:153441" [Danio rerio (taxid:7955)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 69/177 (38%), Positives = 102/177 (57%)

Query:    67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             T ++TG+ +GIG+E AR +A  GA VVMA R+L  A +   + +   +G     +I    
Sbjct:    54 TVVITGANTGIGKETARDMARRGARVVMACRDLSKAEKAAAEIRRS-TGNA---DIVVRH 109

Query:   127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
             L+L SL SV +F+  +      L +LINNAG+     P+  ++DGYE    VNHL   LL
Sbjct:   110 LNLASLHSVRQFAHQYTATEDRLDILINNAGVMMC--PKSLTEDGYETQFAVNHLGHFLL 167

Query:   187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
             ++LL   L + SPSR+INV+S+ H  G +  +D+N    +  Y SL+ Y  SKLA +
Sbjct:   168 TVLLLDMLKKSSPSRVINVSSITHKGGKIHFDDLNF--NKAPYDSLVSYRQSKLANL 222

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:2181510 Dhrsx "dehydrogenase/reductase (SDR family) X chromosome" [Mus musculus (taxid:10090)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 77/190 (40%), Positives = 104/190 (54%)

Query:    57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK 116
             P  LPP      IVTG+T+GIGR  ARQLA  G  VV+A  +     E++   + E    
Sbjct:    35 PPVLPPQPGRVAIVTGATAGIGRSTARQLARLGMCVVVAGNDEHRGQEVVSSIRAEMGSD 94

Query:   117 GLPLNIEAMELDLLSLDSVVRFSEAWNGRLG-PLHVLINNAGIFSIGEPQKFSKDGYEEH 175
                     + LDL SL SV  F+  +   LG PLH+L+NNAG+    EP+  ++DG+E H
Sbjct:    95 ----RAHFLPLDLASLASVRGFARDFQA-LGLPLHLLVNNAGVML--EPRAETEDGFERH 147

Query:   176 MQVNHLAPALLSILLFPSL----IRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTS 231
             + VN L   LL++LL P+L      G  SR++ V S  HYVG VD  D++   GR  Y+ 
Sbjct:   148 LGVNFLGHFLLTLLLLPALRASGAEGRGSRVVTVGSATHYVGTVDMADLH---GRHAYSP 204

Query:   232 LMGYSGSKLA 241
                Y+ SKLA
Sbjct:   205 YAAYAQSKLA 214

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q5F389 WWOX "WW domain-containing oxidoreductase" [Gallus gallus (taxid:9031)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 71/180 (39%), Positives = 106/180 (58%)

Query:    69 IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
             I+TG+ SGIG E A+  A  GA+V++A RN+   N+ +Q+  EEW  K     +EAM LD
Sbjct:   128 IITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQRILEEWH-KA---KVEAMTLD 183

Query:   129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
             L SL SV  F+EA+  +  PLH+L+ NA IF  G     ++DG E   QVNHL    L  
Sbjct:   184 LASLRSVQNFAEAFKSKNMPLHILVCNAAIF--GSSWCLTEDGLESTFQVNHLGHFYLVQ 241

Query:   189 LLFPSLIRGSPSRIINVNSVMH-YVGFVDTE---DMNVVS-GRRKYTSLMGYSGSKLAQV 243
             LL   L R SP+R++ V+S  H +    D+    D +++S  +++Y +++ Y+ SKL  +
Sbjct:   242 LLEDILRRSSPARVVVVSSESHRFTEIKDSSGKLDFSLLSPSKKEYWAMLAYNRSKLCNI 301

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q8N5I4 DHRSX "Dehydrogenase/reductase SDR family member on chromosome X" [Homo sapiens (taxid:9606)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 77/208 (37%), Positives = 115/208 (55%)

Query:    40 VIYEMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL 99
             VI   L +R     L+ P+  PP  D   IVTG T GIG   A+ LA  G HV++A  N 
Sbjct:    20 VILAQLLRRCRGGFLE-PV-FPPRPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNND 77

Query:   100 KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF 159
               A +++ K +EE     L   +E +  DL S+ S+ +F + +  +  PLHVLINNAG+ 
Sbjct:    78 SKAKQVVSKIKEET----LNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVM 133

Query:   160 SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-GSP---SRIINVNSVMHYVGFV 215
              +  PQ+ ++DG+EEH  +N+L   LL+ LL  +L   GSP   +R++ V+S  HYV  +
Sbjct:   134 MV--PQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATHYVAEL 191

Query:   216 DTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
             + +D+        Y+    Y+ SKLA V
Sbjct:   192 NMDDLQ---SSACYSPHAAYAQSKLALV 216

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

MGI|MGI:1931237 Wwox "WW domain-containing oxidoreductase" [Mus musculus (taxid:10090)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 75/180 (41%), Positives = 104/180 (57%)

Query:    69 IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
             +VTG+ SGIG E A+  A  GAHV++A RNL  A+E + +  EEW  K     +EAM LD
Sbjct:   128 LVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWH-KA---KVEAMTLD 183

Query:   129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
             L  L SV  F+EA+  +   LHVL+ NAG F++  P   +KDG E   QVNHL    L  
Sbjct:   184 LAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFAL--PWGLTKDGLETTFQVNHLGHFYLVQ 241

Query:   189 LLFPSLIRGSPSRIINVNSVMH-YVGFVDTE---DMNVVSGRRK-YTSLMGYSGSKLAQV 243
             LL   L R SP+R+I V+S  H +    D+    D++ +S  R  Y +++ Y+ SKL  +
Sbjct:   242 LLQDVLCRSSPARVIVVSSESHRFTDINDSSGKLDLSRLSPPRSDYWAMLAYNRSKLCNI 301

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=NAS

GO:0001649 "osteoblast differentiation" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0006915 "apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019899 "enzyme binding" evidence=ISO;IPI

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0048705 "skeletal system morphogenesis" evidence=IMP

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0071560 "cellular response to transforming growth factor beta stimulus" evidence=ISO;IDA

ZFIN|ZDB-GENE-070912-611 si:dkey-94e7.2 "si:dkey-94e7.2" [Danio rerio (taxid:7955)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 70/181 (38%), Positives = 101/181 (55%)

Query:    63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
             ++D T I+TG+ +GIG+E  + LA+ G  ++MA R+++ A    ++  EE SG     NI
Sbjct:    14 LDDKTIIITGANTGIGKETTKDLAKRGPRIIMACRDVEKAERAQREIMEE-SGNQ---NI 69

Query:   123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
                +LDL    S+  F+E  N     LH+LINNAG+     P   + DG+E    VNHL 
Sbjct:    70 VIRKLDLSDTRSIREFAEVINSEERSLHLLINNAGVMMC--PYSKTADGFEMQFGVNHLG 127

Query:   183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQ 242
               LL+ LL   L R +PSRIIN++S+ H  G +  +D+N     R Y S   Y  SKLA 
Sbjct:   128 HFLLTFLLIDLLKRSAPSRIINLSSMAHSWGTITLDDIN---SERNYHSRRAYGQSKLAN 184

Query:   243 V 243
             +
Sbjct:   185 I 185

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	249
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-56
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	1e-38
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-37
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-34
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-32
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-31
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	9e-28
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	5e-26
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-25
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	1e-24
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-23
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	7e-23
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-22
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	7e-22
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-21
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-21
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-21
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-21
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-20
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	2e-20
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-20
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	5e-20
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-19
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-19
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	8e-19
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-18
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-18
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-18
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-17
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-17
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-17
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	8e-17
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-16
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-16
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	5e-16
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	6e-16
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	9e-16
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	9e-16
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-15
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-15
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-15
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-15
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	6e-15
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-15
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-15
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-14
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-14
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-14
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-14
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	4e-14
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	5e-14
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-14
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	6e-14
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	7e-14
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	8e-14
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-13
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-13
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-13
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-13
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-13
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-13
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-13
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	6e-13
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-12
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-12
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-12
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	3e-12
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	5e-12
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	5e-12
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	8e-12
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	8e-12
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	9e-12
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-11
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-11
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-11
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-11
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-11
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-11
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-11
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-11
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-11
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	4e-11
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	5e-11
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	6e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	8e-11
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	8e-11
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	9e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-10
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-10
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-10
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-10
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-10
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-10
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-10
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-10
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	3e-10
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-10
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-10
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	5e-10
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-10
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	5e-10
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	7e-10
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	8e-10
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	8e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-10
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	9e-10
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	9e-10
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-09
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-09
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-09
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-09
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-09
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-09
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-09
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-09
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-09
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-09
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-09
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-09
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-09
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-09
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-09
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	4e-09
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-09
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-09
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	6e-09
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	6e-09
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	6e-09
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	8e-09
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	9e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	9e-09
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	9e-09
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-08
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-08
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-08
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-08
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-08
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-08
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-08
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-08
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-08
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-08
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-08
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	3e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-08
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-08
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	3e-08
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-08
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	4e-08
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-08
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	4e-08
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-08
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	6e-08
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	7e-08
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	8e-08
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	8e-08
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	8e-08
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	8e-08
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	9e-08
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	9e-08
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-07
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-07
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-07
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-07
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-07
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-07
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-07
pfam08659	181	pfam08659, KR, KR domain	3e-07
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-07
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	5e-07
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	7e-07
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	8e-07
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	9e-07
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	9e-07
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	9e-07
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-06
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-06
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-06
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-06
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	1e-06
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	2e-06
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-06
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-06
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	4e-06
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	4e-06
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	4e-06
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-06
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	5e-06
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	5e-06
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	5e-06
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	6e-06
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	6e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	6e-06
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	9e-06
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-05
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	1e-05
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-05
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	3e-05
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-05
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	3e-05
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-05
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-05
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	5e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-05
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	6e-05
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	7e-05
cd08952	480	cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup	9e-05
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-04
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-04
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-04
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-04
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-04
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-04
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-04
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-04
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	4e-04
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	4e-04
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	6e-04
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	9e-04
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	0.001
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	0.002
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	0.002
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	0.002
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	0.002
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	0.003
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	0.003
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	0.004
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  179 bits (456), Expect = 7e-56
 Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 15/179 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRN----LKAANELIQKWQEEWSGKGLPLNIEA 124
           ++TG+ SGIG+E AR+LA+ GAHV++A RN     +AA E+ ++             +E 
Sbjct: 5   VITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNA--------KVEV 56

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           ++LDL SL SV +F+E +  R   L +LINNAGI +   P++ +KDG+E    VN+L   
Sbjct: 57  IQLDLSSLASVRQFAEEFLARFPRLDILINNAGIMAP--PRRLTKDGFELQFAVNYLGHF 114

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           LL+ LL P L   +PSRI+NV+S+ H  G +D  D++ +   ++Y+    Y  SKLA +
Sbjct: 115 LLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLD-LENNKEYSPYKAYGQSKLANI 172

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  135 bits (341), Expect = 1e-38
 Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 17/181 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNL----KAANELIQKWQEEWSGKGLPLNI 122
           T I+TG+ +GIG+E AR+LA  GA V+MA R++    +AA E+ +              +
Sbjct: 3   TVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNH--------EV 54

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
               LDL SL S+  F+  +      L VLINNAG+     P   ++DG+E    VNHL 
Sbjct: 55  IVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRC--PYSKTEDGFEMQFGVNHLG 112

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQ 242
             LL+ LL   L + +PSRI+NV+S+ H  G ++ +D+N     + Y +   Y  SKLA 
Sbjct: 113 HFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLN---SEKSYNTGFAYCQSKLAN 169

Query: 243 V 243
           V
Sbjct: 170 V 170

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  129 bits (327), Expect = 7e-37
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 22/178 (12%)

Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++SGIGR IAR+LA  GA VV+A RN +A         E  + + L  N  A++ 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEAL-------AELAAIEALGGNAVAVQA 53

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D+   + V    E      G L +L+NNAGI   G  ++ + + ++  + VN     LL+
Sbjct: 54  DVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLT 113

Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
               P + +    RI+N++S               V+G R       Y+ SK A   L
Sbjct: 114 RAALPHMKKQGGGRIVNISS---------------VAGLRPLPGQAAYAASKAALEGL 156

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  125 bits (314), Expect = 1e-34
 Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 11/182 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG+ SGIG E AR  A  GAHV++A RN+  A+  + +  EEW        +EAM 
Sbjct: 3   VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKA----RVEAMT 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LDL SL SV RF+EA+  +  PLHVL+ NA +F++  P   ++DG E   QVNHL    L
Sbjct: 59  LDLASLRSVQRFAEAFKAKNSPLHVLVCNAAVFAL--PWTLTEDGLETTFQVNHLGHFYL 116

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTE----DMNVVS-GRRKYTSLMGYSGSKLA 241
             LL   L R +P+R+I V+S  H    +       D +++S  ++KY S++ Y+ +KL 
Sbjct: 117 VQLLEDVLRRSAPARVIVVSSESHRFTDLPDSCGNLDFSLLSPPKKKYWSMLAYNRAKLC 176

Query: 242 QV 243
            +
Sbjct: 177 NI 178

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 3e-32
 Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 10/176 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+ +G+G E A  LA  GAHVV+AVRNL        +      G     ++   E
Sbjct: 18  VAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGA----DVTLQE 73

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LDL SL SV   ++A       + +LINNAG+     P++ + DG+E     NHL    L
Sbjct: 74  LDLTSLASVRAAADALRAAYPRIDLLINNAGVMY--TPKQTTADGFELQFGTNHLGHFAL 131

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYV-GFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           + LL   L+    SR++ V+S  H +   +  +D+      R+Y  +  Y  SKLA
Sbjct: 132 TGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQ---WERRYNRVAAYGQSKLA 184

Length = 306

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  117 bits (294), Expect = 2e-31
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T IVTG  SG+G E  R LA++GAHV++  R    A E         +  G+   +E + 
Sbjct: 28  TAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVARE---------ALAGID-GVEVVM 77

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LDL  L+SV  F+E +      + +LINNAG+ +   P+    DG+E     NHL    L
Sbjct: 78  LDLADLESVRAFAERFLDSGRRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFAL 135

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
             LL+P+L  G+ +R++ ++S  H    +  +D +     R Y   + Y  SK A
Sbjct: 136 VNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHF---TRGYDKWLAYGQSKTA 187

Length = 315

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  106 bits (266), Expect = 9e-28
 Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 23/177 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++SGIGR IAR LA  GA VV+A R    + E   +       +       A+ 
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAARR---SEEEAAEALAAAIKEAGGGRAAAVA 63

Query: 127 LDLLS-LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPA 184
            D+    +SV     A     G + +L+NNAGI     P ++ +++ ++  + VN L   
Sbjct: 64  ADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAF 123

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           LL+    P + +    RI+N++SV    G                     Y+ SK A
Sbjct: 124 LLTRAALPLMKKQ---RIVNISSVAGLGGPPG---------------QAAYAASKAA 162

Length = 251

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 99.2 bits (248), Expect = 5e-26
 Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 13/145 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKA--ANELIQKWQEEWSGKGLPLNIE 123
           T ++TG T G+G  +AR LA  GA H+V+  R   A  A EL+ + +           + 
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALG------AEVT 55

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
               D+   D++     A    LGPL  +++NAG+   G  ++ + + +E  +       
Sbjct: 56  VAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGA 115

Query: 184 ALLSILLFPSLIRGSPSRIINVNSV 208
             L  L             +  +SV
Sbjct: 116 WNLHELTRDL----DLGAFVLFSSV 136

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  101 bits (253), Expect = 1e-25
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 20/173 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG++SGIG E+A+QLA  G ++++  R       L ++ +++   +     +E + 
Sbjct: 8   TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVE-----VEVIP 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL   +++ R  +    R GP+ VL+NNAG  + G   + S D  EE +Q+N LA   L
Sbjct: 63  ADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
           +  + P ++      IIN+ S     G + T  M V            YS +K
Sbjct: 123 TKAVLPGMVERGAGHIINIGSAA---GLIPTPYMAV------------YSATK 160

Length = 265

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 99.1 bits (247), Expect = 1e-24
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 12/149 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLN-IEA 124
           T ++TG++SG+G   A+ LA  G  HVVMA R+   A +  Q+        G+P +    
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQE-------VGMPKDSYSV 55

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQ-KFSKDGYEEHMQVNHLAP 183
           +  DL SLDSV +F + +     PL  L+ NA ++     + +F+ DG+E  + VNHL  
Sbjct: 56  LHCDLASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGH 115

Query: 184 ALLSILLFPSLIRGS--PSRIINVNSVMH 210
            LL+ LL   L R      RI+ V S+ H
Sbjct: 116 FLLTNLLLEDLQRSENASPRIVIVGSITH 144

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 94.0 bits (234), Expect = 2e-23
 Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 25/175 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIG EIAR LA  G  V + +RN +    L               ++EA+ 
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAAL----------SASGGDVEAVP 51

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D    +      +A   R G + VL++NAGI      ++ S    E H  +N +APA L
Sbjct: 52  YDARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAEL 111

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           +  L P+L      R++ +NS               +SG+R      GYS SK A
Sbjct: 112 TRALLPALREAGSGRVVFLNS---------------LSGKRVLAGNAGYSASKFA 151

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 94.4 bits (235), Expect = 7e-23
 Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 12/183 (6%)

Query: 63  VNDLT---CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP 119
           V DL+    +VTG++ G+G  +AR+LA +GA V++ VRN       +   +       L 
Sbjct: 9   VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLS 68

Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
           L      LDL SL SV    E       P+H+LINNAG+ +  E Q  + DG+E     N
Sbjct: 69  LR----ALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQT-TADGFELQFGTN 123

Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
           HL    L+  L P L+R   +R+ + +S+    G ++ +D+N     R Y  +  YS SK
Sbjct: 124 HLGHFALTAHLLP-LLRAGRARVTSQSSIAARRGAINWDDLNW---ERSYAGMRAYSQSK 179

Query: 240 LAQ 242
           +A 
Sbjct: 180 IAV 182

Length = 313

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 90.3 bits (225), Expect = 7e-22
 Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 23/184 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             IVTG++ GIGR IA  LA+ GA VV+A   N +AA EL     EE   +G   +  A+
Sbjct: 7   VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQEL----LEEIKEEG--GDAIAV 60

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           + D+ S + V    E    + G + +L+NNAGI + G     + + ++  + VN     L
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVML 120

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
           L+    P +I+     I+N++S+   +G                     YS SK A    
Sbjct: 121 LTRYALPYMIKRKSGVIVNISSIWGLIGASCEV---------------LYSASKGAVNAF 165

Query: 246 ETKN 249
            TK 
Sbjct: 166 -TKA 168

Length = 247

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 90.4 bits (225), Expect = 7e-22
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 25/154 (16%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGKGLPLNIEAM 125
           ++TG +SGIG  +A  LA  G  V+   RN   L++  EL            L  N+E +
Sbjct: 4   LITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGEL------------LNDNLEVL 51

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----H 180
           ELD+   +S+    +    R G + VL+NNAG    G  ++ S +   E  +VN      
Sbjct: 52  ELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLR 111

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +  A L     P + +    RI+NV+SV   V  
Sbjct: 112 VTRAFL-----PLMRKQGSGRIVNVSSVAGLVPT 140

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 89.8 bits (223), Expect = 1e-21
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 19/149 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG T GIG  I  +LA  GA V    RN K  +E + +W+E    KG    +E   
Sbjct: 8   TALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWRE----KG--FKVEGSV 61

Query: 127 LDLLS-------LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
            D+ S       +D+V           G L++L+NNAG     E + ++++ Y   M  N
Sbjct: 62  CDVSSRSERQELMDTVASHFG------GKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTN 115

Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSV 208
             A   LS L  P L       I+ ++SV
Sbjct: 116 FEAAYHLSRLAHPLLKASGNGNIVFISSV 144

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 89.2 bits (222), Expect = 1e-21
 Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 10/143 (6%)

Query: 70  VTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           VTG+  GIG EI RQLA+SG   V++  R+++     ++K + E       L++   +LD
Sbjct: 5   VTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE------GLSVRFHQLD 58

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           +    S+   ++    + G L +L+NNAGI F   +    +++   E M+ N      ++
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVT 118

Query: 188 ILLFPSLIRGSPS-RIINVNSVM 209
             L P L++ SP+ RI+NV+S +
Sbjct: 119 QALLP-LLKKSPAGRIVNVSSGL 140

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 88.4 bits (220), Expect = 4e-21
 Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIGR IA +LA  GA V +  R+ +AA E +++       K L  N  A+E
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEE------IKALGGNAAALE 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   ++V    E      GP+ +L+NNAGI       + S++ ++  + VN      +
Sbjct: 56  ADVSDREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNV 115

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           +  +  ++I+    RIIN++SV+  +G
Sbjct: 116 TQAVIRAMIKRRSGRIINISSVVGLIG 142

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 88.8 bits (221), Expect = 4e-21
 Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 5/141 (3%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           I+TG++SGIG E+A  LA  GA +V++ R  +   E+  +  E  +          + LD
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPS-----PHVVPLD 61

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +  L+   +  E      G L +LINNAGI         S D   + M+VN+  P  L+ 
Sbjct: 62  MSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTK 121

Query: 189 LLFPSLIRGSPSRIINVNSVM 209
              P LI  S   I+ V+S+ 
Sbjct: 122 AALPHLIERSQGSIVVVSSIA 142

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 17/147 (11%)

Query: 69  IVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           ++TG++ GIG E+ RQL   G   V+   R+  AA EL                +  +EL
Sbjct: 2   LITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAAL-------GASHSRLHILEL 54

Query: 128 DLLSL--DSVVRFSEAWNGRLG--PLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLA 182
           D+     +S     EA   RLG   L VLINNAGI     P  +   +   E  QVN L 
Sbjct: 55  DVTDEIAESA----EAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLG 110

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVM 209
           P LL+    P L++G+ ++IIN++S +
Sbjct: 111 PLLLTQAFLPLLLKGARAKIINISSRV 137

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 88.1 bits (219), Expect = 2e-20
 Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 15/150 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL-NIEAM 125
           T I+TG++SG+G   A+ LA+ G HV+MA RNLK A    Q+        G+P  +   +
Sbjct: 8   TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL-------GIPPDSYTII 60

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAP 183
            +DL  LDSV RF + +     PL  L+ NA ++   + EP + S  GYE  M  NHL  
Sbjct: 61  HIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLR-SPQGYELSMATNHLGH 119

Query: 184 ALLSILLFPSLIRGSPS---RIINVNSVMH 210
            LL  LL   L + SP+   R++ + +V  
Sbjct: 120 FLLCNLLLEDL-KKSPAPDPRLVILGTVTA 148

Length = 322

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 21/158 (13%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  G+GR IA +LA +GA VV+  R+ + A E   +  E     G     +A++ D
Sbjct: 10  LVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAE---ELVEAVEALG--RRAQAVQAD 64

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HLAP 183
           +    ++     A   R G + +L+NNAGIF        S D ++E + VN     HL  
Sbjct: 65  VTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLR 124

Query: 184 ALLSILLFPSLIRGSPSRIINVNSV------MHYVGFV 215
           A++     P + +    RI+N++SV           + 
Sbjct: 125 AVV-----PPMRKQRGGRIVNISSVAGLPGWPGRSNYA 157

Length = 249

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 86.7 bits (215), Expect = 5e-20
 Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 16/147 (10%)

Query: 69  IVTGSTSGIGREIARQLAESGA-HVVMAVRN-LKAANELIQKWQEEWSGKGLPL-NIEAM 125
           I+TG++SG+G   A+ LAE+G  HVVMA R+ LKA        +      G+P  +   M
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKA--------ERAAKSAGMPKDSYTVM 52

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF--SIGEPQKFSKDGYEEHMQVNHLAP 183
            LDL SLDSV +F + +     PL VL+ NA ++  +  EP  F+ DG+E  +  NHL  
Sbjct: 53  HLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEP-TFTADGFELSVGTNHLGH 111

Query: 184 ALLSILLFPSLIRGS-PS-RIINVNSV 208
            LLS LL   L +   PS R+I V S+
Sbjct: 112 FLLSRLLLDDLKKSDYPSKRLIIVGSI 138

Length = 308

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 83.8 bits (208), Expect = 3e-19
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 8/153 (5%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           +     +VTG+ SGIG EIA  LA+ GA VV+A  N +AA        E     G     
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAA----AAAAEALQKAGGKAIG 57

Query: 123 EAMEL-DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
            AM++ D  ++++ + ++       G + +L+NNAGI  +   + F  + +++ + +   
Sbjct: 58  VAMDVTDEEAINAGIDYAVE---TFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLD 114

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
              L +    P +      RIIN+ SV   VG 
Sbjct: 115 GAFLTTKAALPIMKAQGGGRIINMASVHGLVGS 147

Length = 258

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 82.7 bits (205), Expect = 5e-19
 Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 22/175 (12%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           VTG+  GIGR IA +LA  GA V++       A    +  +             A ++D+
Sbjct: 11  VTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG------GKARARQVDV 64

Query: 130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSIL 189
               ++     A     G L +L+ NAGIF +    +   + +E  + VN     LL+  
Sbjct: 65  RDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQA 124

Query: 190 LFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRK-YTSLMGYSGSKLAQV 243
             P+LIR    RI+  +S               V+G R  Y  L  Y+ SK   V
Sbjct: 125 ALPALIRAGGGRIVLTSS---------------VAGPRVGYPGLAHYAASKAGLV 164

Length = 251

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 81.6 bits (202), Expect = 8e-19
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 29/178 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG TSGIG  +AR+  E+G  V++  R      E + + ++E        NI  + 
Sbjct: 7   TVLITGGTSGIGLALARKFLEAGNTVIITGRR----EERLAEAKKELP------NIHTIV 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI---FSIGEPQKFSKDGYEEHMQVNHLAP 183
           LD+   +SV   +EA       L +LINNAGI     + +P     D  +  +  N + P
Sbjct: 57  LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDL-DKADTEIDTNLIGP 115

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
             L     P L +   + I+NV+S +    FV      V            Y  +K A
Sbjct: 116 IRLIKAFLPHLKKQPEATIVNVSSGL---AFVPMAANPV------------YCATKAA 158

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 81.6 bits (202), Expect = 1e-18
 Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 6/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIG  IA  LAE+GA++V+  RN + A E  Q  ++E       +   A  
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE------GVEATAFT 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   +++    EA     G + +L+NNAGI      ++F +  + + + VN      +
Sbjct: 61  CDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           S  +   +I+    +IIN+ S++  +G 
Sbjct: 121 SQAVARHMIKQGHGKIINICSLLSELGG 148

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 80.8 bits (200), Expect = 3e-18
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 35/185 (18%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           +     ++TG++SGIG   AR LAE+GA VV+A R  +    L  +      G  L L  
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALAL-- 58

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN-- 179
               LD+    +V    EA     G + +L+NNAG+ ++G+P  +   D ++  +  N  
Sbjct: 59  ---ALDVTDRAAVEAAIEALPEEFGRIDILVNNAGL-ALGDPLDEADLDDWDRMIDTNVK 114

Query: 180 ---HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYS 236
              +   A+L     P ++      IIN+ S               ++GR  Y     Y 
Sbjct: 115 GLLNGTRAVL-----PGMVERKSGHIINLGS---------------IAGRYPYPGGAVYG 154

Query: 237 GSKLA 241
            +K A
Sbjct: 155 ATKAA 159

Length = 246

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 79.8 bits (198), Expect = 5e-18
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 6/140 (4%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++ GIGR IA +LA  GA VV+   N +AA  L      E    G       +  D
Sbjct: 9   LVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEAL----AAELRAAG--GEARVLVFD 62

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +    +V    EA     G L +L+NNAGI       + S++ ++  + VN      +  
Sbjct: 63  VSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVR 122

Query: 189 LLFPSLIRGSPSRIINVNSV 208
              P +I+    RI+N++SV
Sbjct: 123 AALPPMIKARYGRIVNISSV 142

Length = 246

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 18/156 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG  SGIG  +A++  E G  V++  RN +   E   +             I    
Sbjct: 7   TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP----------EIHTEV 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-----FSIGEPQKFSKDGYEEHMQVNHL 181
            D+   DS     E        L+VLINNAGI      +  E      D  E+ +  N L
Sbjct: 57  CDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAED---LLDDAEQEIATNLL 113

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT 217
           AP  L+ LL P L+R   + IINV+S + +V    T
Sbjct: 114 APIRLTALLLPHLLRQPEATIINVSSGLAFVPMAST 149

Length = 245

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 78.5 bits (194), Expect = 2e-17
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 8/141 (5%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGL-PLNIEAMEL 127
           +VT ++SGIG  IAR LA  GA V +  RN     E +++   E    G   L + A   
Sbjct: 5   LVTAASSGIGLAIARALAREGARVAICARNR----ENLERAASELRAGGAGVLAVVA--- 57

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           DL   + + R  E      G + +L+NNAG    G   + + + + E   +  L+   + 
Sbjct: 58  DLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIV 117

Query: 188 ILLFPSLIRGSPSRIINVNSV 208
             + P +      RI+N++S+
Sbjct: 118 RAVLPGMKERGWGRIVNISSL 138

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 77.8 bits (192), Expect = 3e-17
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG+ SGIG  IAR LA +GA+VV+     + A    +    +  G      +  + 
Sbjct: 3   TALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKV-AGDAGGS-----VIYLP 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   D +     A     G L +L+NNAGI  +   ++F  + ++  + V   +    
Sbjct: 57  ADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHT 116

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
                P + +    RIIN+ S    V  
Sbjct: 117 IRAALPHMKKQGWGRIINIASAHGLVAS 144

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 77.6 bits (191), Expect = 8e-17
 Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 16/149 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPL-NIEA 124
           T I+TG++SG+G   A+ LA +G  HV+MA R+   A +  +         G+P  +   
Sbjct: 5   TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKS-------LGMPKDSYTI 57

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF--SIGEPQKFSKDGYEEHMQVNHLA 182
           M LDL SLDSV +F + +     PL  L+ NA ++  +  EP +F+ DG+E  +  NHL 
Sbjct: 58  MHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEP-RFTADGFELSVGTNHLG 116

Query: 183 PALLSILLFPSLIRGSPS---RIINVNSV 208
             LL  LL   L + SP+   R+I V S+
Sbjct: 117 HFLLCNLLLDDL-KNSPNKDKRLIIVGSI 144

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 76.0 bits (188), Expect = 1e-16
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++ GIGR IA +LA  GA+VV+   + +A  E +        GK L     A++ D
Sbjct: 9   LVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKAL-----AVQGD 63

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +   +SV R  +      G + +L+NNAGI       +  ++ ++  +  N      L+ 
Sbjct: 64  VSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTK 123

Query: 189 LLFPSLIRGSPSRIINVNSV 208
            +   +++    RIIN++SV
Sbjct: 124 AVARPMMKQRSGRIINISSV 143

Length = 248

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 74.9 bits (185), Expect = 4e-16
 Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 38/183 (20%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           +     +VTG+  GIGR    QL   GA  V  A R+ ++  +L  +             
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPR------------- 50

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYE---EHMQV 178
           +  ++LD+    SV   +EA       + +L+NNAGIF  G      +   +     M+ 
Sbjct: 51  VVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRTGSL--LLEGDEDALRAEMET 104

Query: 179 NHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGS 238
           N+  P  ++    P L       I+NV SV+ +V F                +L  YS S
Sbjct: 105 NYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF---------------PNLGTYSAS 149

Query: 239 KLA 241
           K A
Sbjct: 150 KAA 152

Length = 238

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 74.8 bits (184), Expect = 5e-16
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 31/176 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + +VTG++SGIGR  A  LA+ GA VV A RN  A + L      E   + L L++    
Sbjct: 11  SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRL----AGETGCEPLRLDVG--- 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D  ++ + +          G    L+N AGI S+      + +G++  M VN    AL+
Sbjct: 64  -DDAAIRAAL-------AAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALV 115

Query: 187 SILLFPSLIR-GSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           +  +  ++I  G    I+NV+S    VG  D                + Y  SK A
Sbjct: 116 ARHVARAMIAAGRGGSIVNVSSQAALVGLPD---------------HLAYCASKAA 156

Length = 245

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 74.8 bits (184), Expect = 6e-16
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK---GLPL 120
           +  T ++TG++ GIG  IAR+    GA V++  R+  A  +   +  EE+  +   GL  
Sbjct: 8   DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAA 67

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
           ++   E     LD V    + W+G    LH+L+NNAG         +++D +    + N 
Sbjct: 68  DVSDDEDRRAILDWV---EDHWDG----LHILVNNAGGNIRKAAIDYTEDEWRGIFETNL 120

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSV 208
            +   LS    P L + + S I+N+ SV
Sbjct: 121 FSAFELSRYAHPLLKQHASSAIVNIGSV 148

Length = 257

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 74.1 bits (182), Expect = 9e-16
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 19/171 (11%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           +TGS+ G+G   AR L   G  VV+  R+ K A +              P     +  DL
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAK---------AACPGAAGVLIGDL 62

Query: 130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSIL 189
            SL    + ++  N  +G    +I+NAGI S G  +K    G    + VN LAP +L+ L
Sbjct: 63  SSLAETRKLADQVNA-IGRFDAVIHNAGILS-GPNRKTPDTGIPAMVAVNVLAPYVLTAL 120

Query: 190 LFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKL 240
           +        P R+I ++S MH  G    +D++     R       YS SKL
Sbjct: 121 IRR------PKRLIYLSSGMHRGGNASLDDID--WFNRGENDSPAYSDSKL 163

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 73.6 bits (181), Expect = 9e-16
 Identities = 47/184 (25%), Positives = 71/184 (38%), Gaps = 36/184 (19%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           + D T +VTG+  GIG+     L   GA  V  AVR+  +A  L+ K+ +          
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGD---------K 51

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG---EPQKFSKDGYEEHMQV 178
           +  + LD+   +S+   +         + V+INNAG+       E      +  ++ M V
Sbjct: 52  VVPLRLDVTDPESIKAAAAQ----AKDVDVVINNAGVLKPATLLEEGAL--EALKQEMDV 105

Query: 179 NHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMG-YSG 237
           N      L+    P L       I+N+NSV     F                  MG YS 
Sbjct: 106 NVFGLLRLAQAFAPVLKANGGGAIVNLNSVASLKNF----------------PAMGTYSA 149

Query: 238 SKLA 241
           SK A
Sbjct: 150 SKSA 153

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 55/160 (34%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 54  LQNPLPLPPVNDLT---CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ 110
           L N  P  PV DLT    ++TG++SGIG   A Q A  GA VV   R      +L+    
Sbjct: 27  LINRPPRQPV-DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARR----EDLLDAVA 81

Query: 111 EEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKD 170
           +  +  G   +  A+  DL  LD+V         R+G + +LINNAG  SI  P   S D
Sbjct: 82  DRITRAG--GDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAG-RSIRRPLAESLD 138

Query: 171 ---GYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS 207
                E  M +N+ AP  L   L P ++      IINV +
Sbjct: 139 RWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT 178

Length = 293

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 6/139 (4%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  G+G   A  LAE+GA V         A EL    +    G+       A+  D
Sbjct: 11  LVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-GGR-----AHAIAAD 64

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L    SV RF +A    LG L  L+NNAGI +     +   D ++  M VN     L+  
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLR 124

Query: 189 LLFPSLIRGSPSRIINVNS 207
              P L      RI+N+ S
Sbjct: 125 AALPHLRDSGRGRIVNLAS 143

Length = 250

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 73.0 bits (179), Expect = 2e-15
 Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 8/177 (4%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG+ SGIG+  A  +A+ G  V M  RN   A E  ++ + E   + + L+I    +D
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHI----VD 60

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +     V  F E +      LHVLINNAG   +   ++ ++DG E++   N L   +L+ 
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAG--CMVNKRELTEDGLEKNFATNTLGTYILTT 118

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
            L P L +    R+I V+S    V  ++T ++   S R  +   M Y+ +K  QV +
Sbjct: 119 HLIPVLEKEEDPRVITVSSGGMLVQKLNTNNLQ--SERTAFDGTMVYAQNKRQQVIM 173

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 72.0 bits (177), Expect = 5e-15
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIG  IAR  A  GA V +A  +   A         + +G      + A+  D
Sbjct: 11  LVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGA----RVLAVPAD 66

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HLAP 183
           +    SV     A     GPL VL+NNAGI    +P   + + +     V+     +   
Sbjct: 67  VTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCR 126

Query: 184 ALLSILLFPSLI-RGSPSRIINVNSV 208
           A+L     P ++ RG  S I+N+ S 
Sbjct: 127 AVL-----PGMVERGRGS-IVNIAST 146

Length = 260

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 71.9 bits (177), Expect = 6e-15
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 29/177 (16%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWS-GKGLPLNIEAMEL 127
           I+TG++ GIGR +A +LA +GA +V+A RN      L Q+  +       +P        
Sbjct: 5   IITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVP-------T 57

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG-YEEHMQVNHLAPALL 186
           D+   ++  R  EA   R G + +L+NNAGI       + +    +E  M+VN+L     
Sbjct: 58  DVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYC 117

Query: 187 SILLFPSLI--RGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           +    P L   RG   +I+ V+S+    G         V  R       GY+ SK A
Sbjct: 118 THAALPHLKASRG---QIVVVSSLAGLTG---------VPTRS------GYAASKHA 156

Length = 263

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 73.4 bits (181), Expect = 6e-15
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 10/150 (6%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P+     ++TG++SGIGR  A ++AE+GA V +  RN +A +EL+ + +           
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA------KGGT 421

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKD---GYEEHMQV 178
             A   DL    +V    +      G +  L+NNAG  SI    + S D    YE  M V
Sbjct: 422 AHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAG-RSIRRSVENSTDRFHDYERTMAV 480

Query: 179 NHLAPALLSILLFPSLIRGSPSRIINVNSV 208
           N+     L + L P +       ++NV+S+
Sbjct: 481 NYFGAVRLILGLLPHMRERRFGHVVNVSSI 510

Length = 657

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.4 bits (176), Expect = 8e-15
 Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 8/143 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG++SGIG  IAR+ A  GA VV+  RN +AA  +      E    G  + + A  
Sbjct: 7   VAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVA----AEILAGGRAIAVAA-- 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+     V     A   R G + +L+NNAG      P     +  ++    VN  +P L
Sbjct: 61  -DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYL 119

Query: 186 LSILLFPSLIRGSPSRIINVNSV 208
            +    P++       I+NV S 
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVAST 142

Length = 251

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 6/147 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG  SGIGR +A + A+ GA VV+   N K A E           +     +   +
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANN------VRKAGGKVHYYK 54

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   + V   ++     +G + +LINNAG+ S  +  +   +  E+  +VN LA    
Sbjct: 55  CDVSKREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWT 114

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           +    P ++  +   I+ + SV   + 
Sbjct: 115 TKAFLPDMLERNHGHIVTIASVAGLIS 141

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 14/154 (9%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
            D   ++TG++ GIG+ +A  LA +GA +++  RN +    L  +          P    
Sbjct: 4   KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-------YPGRHR 56

Query: 124 AMELDLLSLD---SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            +  DL S     +V+  +      +G ++VLINNAG+      +    +  E  + +N 
Sbjct: 57  WVVADLTSEAGREAVLARAR----EMGGINVLINNAGVNHFALLEDQDPEAIERLLALNL 112

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
            AP  L+  L P L     + ++NV S    +G+
Sbjct: 113 TAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY 146

Length = 263

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 5/146 (3%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++SG G     +LA+ G  V+  +RN +    L+     + +   L  NI+  +LD
Sbjct: 7   IVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLL----SQATQLNLQQNIKVQQLD 62

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +   +S+  F       +G + +L+NNAG  + G  ++   + Y +  + N      ++ 
Sbjct: 63  VTDQNSIHNFQLVLK-EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQ 121

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGF 214
            + P + +    +IIN++S+   VGF
Sbjct: 122 AVLPYMRKQKSGKIINISSISGRVGF 147

Length = 280

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 27/184 (14%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           V     +VTG + GIGR IA+   E+GA V+++ R  +A  +      EE S  G     
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADA----AEELSAYG---EC 56

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHL 181
            A+  DL S + +         R   L VL+NNAG  + G P + F + G+++ M +N  
Sbjct: 57  IAIPADLSSEEGIEALVARVAERSDRLDVLVNNAGA-TWGAPLEAFPESGWDKVMDINVK 115

Query: 182 APALLSILLFPSLIRGS----PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSG 237
           +   L+  L P L   +    P+R+IN+ S+             VVSG   Y+    Y  
Sbjct: 116 SVFFLTQALLPLLRAAATAENPARVINIGSI----------AGIVVSGLENYS----YGA 161

Query: 238 SKLA 241
           SK A
Sbjct: 162 SKAA 165

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 31/175 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG++ GIG  IAR+LA     +++  R  +  +EL            LP       
Sbjct: 5   TALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAA---------ELP-GATPFP 53

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +DL   +++     A   +LG L VL++NAG+  +G   + + D +   ++VN +APA L
Sbjct: 54  VDLTDPEAI----AAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAEL 109

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           + LL P+L R +   ++ +NS     G          +G R       Y+ SK A
Sbjct: 110 TRLLLPAL-RAAHGHVVFINS-----G----------AGLRANPGWGSYAASKFA 148

Length = 227

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 69.2 bits (170), Expect = 4e-14
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 8/147 (5%)

Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIGR IA +LA+ GA V++  R+ +   E + +  + +  K L      +  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKAL-----GVVC 55

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D+   + V    E     LGP+ +L+NNAGI       +  ++ ++  +  N      L+
Sbjct: 56  DVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLT 115

Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVGF 214
             +   +I+    RIIN++SV   VG 
Sbjct: 116 QAVLRIMIKQRSGRIINISSV---VGL 139

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 68.8 bits (169), Expect = 5e-14
 Identities = 38/148 (25%), Positives = 51/148 (34%), Gaps = 15/148 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRN-----LKAANELIQKWQEEWSGKGLPLN 121
             +VTG+   IGR IA  LA  G  VV+          +  +EL          +     
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQA---- 57

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
                 DL    +      A     G   VL+NNA  F      + S+D + E   +N  
Sbjct: 58  ------DLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLK 111

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVM 209
           AP LL       L       IIN+   M
Sbjct: 112 APYLLIQAFARRLAGSRNGSIINIIDAM 139

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 68.8 bits (169), Expect = 5e-14
 Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 17/175 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG +SGIG+ +A++L + GA+V++  R+     E +++ + E +  G  ++  +  
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISA- 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL   + V +       + GP  +++N AGI   G  +  + + +E  M VN+     +
Sbjct: 62  -DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           +  + P +    P  I+ V+S    VG               Y++   Y  SK A
Sbjct: 121 AHAVLPLMKEQRPGHIVFVSSQAALVGIYG------------YSA---YCPSKFA 160

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 68.7 bits (168), Expect = 6e-14
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 15/149 (10%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIGR   + LA++GA VV   R        +     E  G      IE + +D
Sbjct: 11  LVTGAGKGIGRATVKALAKAGARVVAVSRT----QADLDSLVRECPG------IEPVCVD 60

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L   D+     E   G +GP+ +L+NNA +  +    + +K+ ++    VN  A   +S 
Sbjct: 61  LSDWDAT----EEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116

Query: 189 LLFPSLI-RGSPSRIINVNSVMHYVGFVD 216
           ++   +I RG P  I+NV+S        +
Sbjct: 117 IVARGMIARGVPGSIVNVSSQASQRALTN 145

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 69.0 bits (169), Expect = 7e-14
 Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 21/179 (11%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP-LNI 122
           +    I+TGS+SGIG   A   A  GA + +  R+     E +++ ++     G+    I
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRD----AERLEETRQSCLQAGVSEKKI 57

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
             +  DL   +   R       + G L +L+NNAGI + G  +    + Y++ M +N  A
Sbjct: 58  LLVVADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRA 117

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
              L+ L  P LI+ +   I+NV+S               V+G R +  ++ Y  SK A
Sbjct: 118 VIYLTKLAVPHLIK-TKGEIVNVSS---------------VAGGRSFPGVLYYCISKAA 160

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 68.2 bits (167), Expect = 8e-14
 Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG++SGIGR  A   AE GA VV+A R+ +A +EL ++   E  G+ +     A+  D
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELARE-VRELGGEAI-----AVVAD 57

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +     V R ++    R G +   +NNAG+   G  +  + + +     VN+L     ++
Sbjct: 58  VADAAQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTL 117

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVG 213
              P L R     +INV S++ Y  
Sbjct: 118 AALPHLRRRGGGALINVGSLLGYRS 142

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
             +      +TG   GIG   AR LA  GA V +   +   A E         +   L L
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKE---------TAAELGL 51

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG 162
            +    LD+    S   F +A    LGP+ VL+NNAG+  +G
Sbjct: 52  -VVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVG 92

Length = 273

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 10/152 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE---LIQKWQEEWSGKGLPLNIE 123
             +VTGSTSGIG  IAR LA +GA++V  +     A E   +      +   K L     
Sbjct: 4   VALVTGSTSGIGLGIARALAAAGANIV--LNGFGDAAEIEAVRAGLAAKHGVKVLYHGA- 60

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
               DL    ++         + G + +L+NNAGI  +   + F  + ++  + +N  A 
Sbjct: 61  ----DLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAV 116

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFV 215
              + L  P + +    RIIN+ SV   V   
Sbjct: 117 FHTTRLALPHMKKQGWGRIINIASVHGLVASA 148

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 67.4 bits (164), Expect = 2e-13
 Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 15/159 (9%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLN 121
           ++    +VTG++ GIGR IA +LA  GA V +   RN +AA+E I++ +   S  G    
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIE---SNGGKAFL 60

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRL------GPLHVLINNAGIFSIGEPQKFSKDGYEEH 175
           IEA   DL S+D V +  E     L        + +L+NNAGI + G  +  +++ ++E 
Sbjct: 61  IEA---DLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI 117

Query: 176 MQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           M VN  AP  L     P L+R    R+IN++S    +GF
Sbjct: 118 MAVNIKAPFFLIQQTLP-LLRAE-GRVINISSAEVRLGF 154

Length = 254

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIG  +AR LAE+GA V    RN +   EL+     +    G P      +LD
Sbjct: 2   LVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELV----ADLRRYGYPF--ATYKLD 55

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
           +    +V    +      GP+ VL+N AGI  +G     S + ++    VN
Sbjct: 56  VADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVN 106

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+ SGIG  +A +    GA VV+A      A           +   +     A+ 
Sbjct: 8   VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARL---------AALEIGPAAIAVS 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+   DS+ R   A   R G + +L NNA +F +      S+D Y+    VN      L
Sbjct: 59  LDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFL 118

Query: 187 SILLFPSLI-RGSPSRIINVNS 207
              +   ++ +G   +IIN+ S
Sbjct: 119 MQAVARHMVEQGRGGKIINMAS 140

Length = 257

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 67.5 bits (165), Expect = 3e-13
 Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 35/193 (18%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           + +   ++TG T  +G  +AR LA++GA V    RN +  +++    +E  +  G  + +
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVA---KEITALGGRAIAL 59

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG-----------IFSIGEPQKF---S 168
            A   D+L   S+ R  E    + G + +LIN AG            +     Q F    
Sbjct: 60  AA---DVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLD 116

Query: 169 KDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRK 228
           ++G+E    +N     L S +    ++      IIN++S+  +                 
Sbjct: 117 EEGWEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPL-------------- 162

Query: 229 YTSLMGYSGSKLA 241
            T +  YS +K A
Sbjct: 163 -TKVPAYSAAKAA 174

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 3e-13
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGKGLPLNIE 123
             +VTGS  G+G EIAR LA +GAHV++  RN   L+AA   ++         G     E
Sbjct: 13  VALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA-------AG--GAAE 63

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
           A+  D+   ++V       +   G L +L+NN G        +         ++ + +AP
Sbjct: 64  ALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAP 123

Query: 184 ALLSILLFPSLIRGSPSRIINVNSV 208
            LLS L    + R    RII + S+
Sbjct: 124 ILLSRLAAQRMKRQGYGRIIAITSI 148

Length = 256

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 66.1 bits (161), Expect = 6e-13
 Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 13/143 (9%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG  +GIG+ IA  LA++GA VV+A    + A  +    Q+   G+ +      +E +
Sbjct: 3   IVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQA-GGQAI-----GLECN 56

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHM----QVNHLAPA 184
           + S   +    +A   + G + +L+NNAG    G P+ F     EE      ++N  +  
Sbjct: 57  VTSEQDLEAVVKATVSQFGGITILVNNAG---GGGPKPFDMPMTEEDFEWAFKLNLFSAF 113

Query: 185 LLSILLFPSLIRGSPSRIINVNS 207
            LS L  P + +     I+N++S
Sbjct: 114 RLSQLCAPHMQKAGGGAILNISS 136

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG+ SG G  IAR+ A+ GA VV+A  N   A         E     +     A++
Sbjct: 7   VAIVTGAGSGFGEGIARRFAQEGARVVIADINADGA---------ERVAADIGEAAIAIQ 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+     V    EA   + G L +L+NNAGI    +P  +  ++ ++    VN  +  L
Sbjct: 58  ADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYL 117

Query: 186 LSILLFPSLIRGSPSRIINVNS 207
            +  L P +       IIN+ S
Sbjct: 118 SAQALVPHMEEQGGGVIINIAS 139

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 3e-12
 Identities = 55/193 (28%), Positives = 78/193 (40%), Gaps = 35/193 (18%)

Query: 60  LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP 119
           L P++ L  +VTG  SGIGR IA   AE+GA V +   +  A                LP
Sbjct: 6   LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAAT---------AARLP 56

Query: 120 -LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQ-KFSKDGYEEHMQ 177
              + A   D+     V R  +    R G L VL+NNAGI        + + + +E+ + 
Sbjct: 57  GAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLA 116

Query: 178 VN-----HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL 232
           VN     + A A + +L       G    II ++S               V+GR  Y   
Sbjct: 117 VNLNGQFYFARAAVPLL----KASGHGGVIIALSS---------------VAGRLGYPGR 157

Query: 233 MGYSGSKLAQVKL 245
             Y+ SK A V L
Sbjct: 158 TPYAASKWAVVGL 170

Length = 264

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESG-AHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEA 124
             I+TG++ GIGR +A +L + G   VV+ + R+     E +Q+ +EE       L +  
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE----EPLQELKEELRP---GLRVTT 53

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQK---FSKDGYEEHMQVNHL 181
           ++ DL     V +  EA     G   +LINNAG  S+G   K      D  +++  +N  
Sbjct: 54  VKADLSDAAGVEQLLEAIRKLDGERDLLINNAG--SLGPVSKIEFIDLDELQKYFDLNLT 111

Query: 182 APALLSILLFPSLI-RGSPSRIINVNS 207
           +P  L+  L  +   RG    ++NV+S
Sbjct: 112 SPVCLTSTLLRAFKKRGLKKTVVNVSS 138

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 64.9 bits (159), Expect = 3e-12
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 12/155 (7%)

Query: 60  LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGK 116
           L P+     ++TG+++G+GR  AR  A  GA VV+  R    L+A    I        G+
Sbjct: 3   LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEI----RAAGGE 58

Query: 117 GLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHM 176
            L +       D+   ++V   ++     LGP+   +NNA +   G  +  + + +    
Sbjct: 59  ALAV-----VADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVT 113

Query: 177 QVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY 211
           +V +L     ++     +       II V S + Y
Sbjct: 114 EVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAY 148

Length = 334

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG++SGIG   AR+ A++GA +++  R  +   EL  +   ++  K LPL     +
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPL-----Q 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP--QKFSKDGYEEHMQVNHLAPA 184
           LD+   +S+    E        + +L+NNAG  ++G    Q+   + +E  +  N     
Sbjct: 57  LDVSDRESIEAALENLPEEFRDIDILVNNAG-LALGLDPAQEADLEDWETMIDTNVKGLL 115

Query: 185 LLSILLFPSLIRGSPSRIINVNSV 208
            ++ L+ P +I  +   IIN+ S+
Sbjct: 116 NVTRLILPIMIARNQGHIINLGSI 139

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 5e-12
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 9/146 (6%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   IVTG+  GIG+  A  LA  GA VV+A  N + A    ++  ++    G      A
Sbjct: 6   DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA----ERVAKQIVADG--GTAIA 59

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSK---DGYEEHMQVNHL 181
           +++D+   DS    ++A     G +  L+NNA I+   +         D Y++ M VN  
Sbjct: 60  VQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLD 119

Query: 182 APALLSILLFPSLIRGSPSRIINVNS 207
              + +  ++  + +     I+N +S
Sbjct: 120 GALVCTRAVYKHMAKRGGGAIVNQSS 145

Length = 250

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 63.4 bits (155), Expect = 5e-12
 Identities = 36/144 (25%), Positives = 74/144 (51%), Gaps = 12/144 (8%)

Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG+T GIG+  A +LA+ G +V++  R  +  + + ++ +E++  +       A   
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVET---KTIAA-- 58

Query: 128 DLLSLDSVV-RFSEAWNGRLGPLHVLINNAGIFSIGEPQKF---SKDGYEEHMQVNHLAP 183
           D  + D +  R  +   G    + +L+NN GI S   P+ F    +D  ++ + VN +A 
Sbjct: 59  DFSAGDDIYERIEKELEGL--DIGILVNNVGI-SHSIPEYFLETPEDELQDIINVNVMAT 115

Query: 184 ALLSILLFPSLIRGSPSRIINVNS 207
             ++ L+ P +++     I+N++S
Sbjct: 116 LKMTRLILPGMVKRKKGAIVNISS 139

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 62.8 bits (153), Expect = 8e-12
 Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 43/192 (22%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           +TG+  G+GR IAR++AE GA V +   N  A  +          G+G+     A   D 
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAF---AAVQD- 59

Query: 130 LSLDSVVRFSEAW-------NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
                 V     W          +G L VL+NNAG+ S G  ++   D +   M +N   
Sbjct: 60  ------VTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAIN--- 110

Query: 183 PALLSILL-----FPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSG 237
             + SI L      P L    P+ I+N++SV     F    D               Y+ 
Sbjct: 111 --VESIFLGCKHALPYLRASQPASIVNISSV---AAFKAEPDY------------TAYNA 153

Query: 238 SKLAQVKLETKN 249
           SK A V   TK+
Sbjct: 154 SK-AAVASLTKS 164

Length = 251

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 62.9 bits (153), Expect = 8e-12
 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 7/150 (4%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
                IVTG+ SGIGR  A+  A  GA VV+A R+ +AA  +               ++ 
Sbjct: 4   AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVG 63

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
           + E    +++++V F  A   R G L VL+NNAG    G      +  ++  M+VN    
Sbjct: 64  SAE----AVEALVDFVAA---RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGV 116

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            L +    P + R     I+N  S +   G
Sbjct: 117 FLWAKYAIPIMQRQGGGSIVNTASQLALAG 146

Length = 252

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 62.9 bits (153), Expect = 9e-12
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIG  IAR+L   G  V+       + N+  + W EE+        +   E
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYF---SGNDCAKDWFEEYGF--TEDQVRLKE 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+   +             GP+ +L+NNAGI      ++ S   + + +  N  +   +
Sbjct: 59  LDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNV 118

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           +  LF ++      RIIN++SV
Sbjct: 119 TQPLFAAMCEQGYGRIINISSV 140

Length = 245

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 1e-11
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 15/150 (10%)

Query: 65  DLT---CIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGKGL 118
           DLT    +VTGS+ GIG  +A  LA++GA V++  R+   L AA E +         KG 
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL---------KGQ 57

Query: 119 PLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQV 178
            L+  A+  D+   D+V    +A+   +GP+ +L+NNAG+      + F  D +E  ++ 
Sbjct: 58  GLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRT 117

Query: 179 NHLAPALLSILLFPSLIRGSPSRIINVNSV 208
           N  +   +   +   +I     +IIN+ SV
Sbjct: 118 NISSVFYVGQAVARHMIARGAGKIINIASV 147

Length = 255

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 16/153 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE-----LIQKWQ------EEWSG 115
              VTG++ GIGR IA +LA++GA VV+A +     +      L    +      E   G
Sbjct: 5   VAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGG 64

Query: 116 KGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH 175
           + LP+      +D+   D V    EA   + G L +L+NNAG   +   +      ++  
Sbjct: 65  QALPI-----VVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLM 119

Query: 176 MQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
            +VN     LLS    P +++     I+N++  
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGHILNISPP 152

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 62.2 bits (152), Expect = 2e-11
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 38/195 (19%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           +     ++TG    +G  +A++LA +GA V +  RN + A  ++ + +    G+ L    
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEAL---- 62

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG-----------IFSIGEPQK----F 167
            A++ D+L  +S+ +  +      GP  +LIN AG              + EP K     
Sbjct: 63  -AVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDL 121

Query: 168 SKDGYEEHMQVNHLAPALLSILLF-PSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR 226
            ++G+E    +N L   LL   +F   ++      IIN++S            MN     
Sbjct: 122 DEEGFEFVFDLNLLG-TLLPTQVFAKDMVGRKGGNIINISS------------MN---AF 165

Query: 227 RKYTSLMGYSGSKLA 241
              T +  YS +K A
Sbjct: 166 TPLTKVPAYSAAKAA 180

Length = 278

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           IVTG++ GIG  IAR+LA  G  V +    +  AA+EL+ + +    G+ +     A++ 
Sbjct: 9   IVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAI-----AVQA 62

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
           D+    +V R  +A     G + VL+NNAG+  +G    F  + ++  +  N
Sbjct: 63  DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATN 114

Length = 245

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG++ GIG  IA+  A++GA +V    ++    EL+ K    +   G  +       D
Sbjct: 14  LITGASYGIGFAIAKAYAKAGATIV--FNDIN--QELVDKGLAAYRELG--IEAHGYVCD 67

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +   D V          +G + +L+NNAGI       + S + + + + ++  AP ++S 
Sbjct: 68  VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSK 127

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVG 213
            + PS+I+    +IIN+ S+M  +G
Sbjct: 128 AVIPSMIKKGHGKIINICSMMSELG 152

Length = 265

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+  GIGR +A  LA+ G +V +  R  +     ++   EE    G+ + I    
Sbjct: 9   NALITGAGRGIGRAVAIALAKEGVNVGLLARTEEN----LKAVAEEVEAYGVKVVIATA- 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   + V    E     LG + +LINNAGI   G+  +     +E+ +QVN +     
Sbjct: 64  -DVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYA 122

Query: 187 SILLFPSLIRGSPSRIINVNS 207
           +  + PS+I      IIN++S
Sbjct: 123 TRAVLPSMIERQSGDIINISS 143

Length = 239

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG+  GIG  IAR  A  GA++++        +  I+K  +E  G+G      A+ 
Sbjct: 8   TALITGALQGIGEGIARVFARHGANLILL-----DISPEIEKLADELCGRG--HRCTAVV 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HL 181
            D+    SV    +    + G + +L+NNAG+  +G     S +  + H+ +N     ++
Sbjct: 61  ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNV 120

Query: 182 APALLSILLFPSLIRGSPSRIINVNSV 208
             A+L     P +I     RI+ ++SV
Sbjct: 121 TKAVL-----PEMIARKDGRIVMMSSV 142

Length = 263

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 17/145 (11%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG++ GIGR IA++LA  GA VV+    +  AA E++ + +    GK +     A++ 
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAA-GGKAI-----AVQA 60

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH----MQVNHLAP 183
           D+     V R  +A     G + +L+NNAG+      +K   +  EE       VN    
Sbjct: 61  DVSDPSQVARLFDAAEKAFGGVDILVNNAGV----MLKKPIAETSEEEFDRMFTVNTKGA 116

Query: 184 ALLSILLFPSLIRGSPSRIINVNSV 208
             +       L  G   RIIN++S 
Sbjct: 117 FFVLQEAAKRLRDG--GRIINISSS 139

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 8/140 (5%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIG+  A++LA  GA VV+A  + +AA    +    E  G    L    +  D
Sbjct: 426 LVTGAAGGIGKATAKRLAAEGACVVLADLDEEAA----EAAAAELGGPDRAL---GVACD 478

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +    +V    E      G + ++++NAGI   G  ++ S + +     VN     L++ 
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAR 538

Query: 189 LLFPSLIR-GSPSRIINVNS 207
                +   G    I+ + S
Sbjct: 539 EAVRIMKAQGLGGSIVFIAS 558

Length = 681

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)

Query: 67  TCIVTGST--SGIGREIARQLAESGAHVVMA-----VRNLKAANELIQKW--QEEWSGKG 117
             +VTG++  +GIG  + R+LA  G  +         + +       +    +EE    G
Sbjct: 7   IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG 66

Query: 118 LPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQ 177
           +    E ME+DL    +  R   A + RLG   +LINNA   +    ++ + +  ++H  
Sbjct: 67  VRC--EHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYA 124

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNS 207
           VN  A  LLS          +  RIIN+ S
Sbjct: 125 VNVRATMLLSSAFAKQYDGKAGGRIINLTS 154

Length = 256

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 60.7 bits (148), Expect = 5e-11
 Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 8/148 (5%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
            +TG  +GIG+ IA+  AE GA V +A R  +      ++      G+  P+       D
Sbjct: 7   FITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC-----D 61

Query: 129 LLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           +   ++V     E      G + +LINNA    +   +  S +G++  + ++       +
Sbjct: 62  VRDPEAVEAAVDETLK-EFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTT 120

Query: 188 ILLFPSLIR-GSPSRIINVNSVMHYVGF 214
             +   LI       I+N+++   Y G 
Sbjct: 121 KAVGKRLIEAKHGGSILNISATYAYTGS 148

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 6e-11
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++SGIGR  A +LA +G  V    RN   A               +P  +E +ELD
Sbjct: 8   LVTGASSGIGRATAEKLARAGYRVFGTSRNPARA-------------APIP-GVELLELD 53

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +    SV    +    R G + VL+NNAG+   G  ++ S    +     N      ++ 
Sbjct: 54  VTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTR 113

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFV 215
            + P +      RIIN++SV+   GF+
Sbjct: 114 AVLPHMRAQGSGRIINISSVL---GFL 137

Length = 270

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 8e-11
 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           C VTG+ SGIGR  A +LA  GA + +  R+   A+ L Q   +  +  G     E   L
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRD---ADGLAQTVADARALGGTV--PEHRAL 57

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D+   D+V  F+   +   G + V++N AGI + G   + + + +   + VN + P  + 
Sbjct: 58  DISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVI 117

Query: 188 ILLFPSLIR-GSPSRIINVNS 207
               P ++  G    ++NV+S
Sbjct: 118 ETFVPPMVAAGRGGHLVNVSS 138

Length = 272

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 8e-11
 Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGA---HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
             ++TG +SGIG  +A +LA   +    V   +R+LK    L      E +G      +E
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRL-----WEAAGALAGGTLE 56

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            ++LD+    SV    E    R   + VL+ NAG+  +G  +  S+D       VN    
Sbjct: 57  TLQLDVCDSKSVAAAVERVTER--HVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGT 114

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFV 215
             +     P + R    RI+  +SV    G  
Sbjct: 115 VRMLQAFLPDMKRRGSGRILVTSSVGGLQGLP 146

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 9e-11
 Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++SGIG+  A   A++G  + +  R+     + ++    E    G+     +++
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQ----DALEALAAELRSTGVKAAAYSID 63

Query: 127 L-DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           L +  ++   +        + G   VLINNAG+   G   +     ++  +Q+N  +   
Sbjct: 64  LSNPEAIAPGI---AELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQ 120

Query: 186 LSILLFPSLIRGSPSRIINVNS 207
               + P +       IINV+S
Sbjct: 121 CCSAVLPGMRARGGGLIINVSS 142

Length = 241

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 59.9 bits (145), Expect = 1e-10
 Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 15/156 (9%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGKGLP 119
           +N  T +VTG+ SGIG+EIA +LA +GA V +A  N     A  + I K      GK + 
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK----AGGKAI- 59

Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
                + +D+ + D+V    +    R G + +L++NAGI  +   + +S   +++ MQ  
Sbjct: 60  ----GVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKK-MQAI 114

Query: 180 HLAPALLSI-LLFPSLIRGSP-SRIINVNSVMHYVG 213
           H+  A L+       + +      +I + SV  +  
Sbjct: 115 HVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA 150

Length = 262

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 15/149 (10%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL---KAANELIQKWQEEWSGKGL 118
            ++    +VTG  SGIG  IA   A  GA V +  R+    + A +L            L
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQL------------L 59

Query: 119 PLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQV 178
             N + +  D+    SV     A     G + +L+N+AG+  +   +  S++ +++ + +
Sbjct: 60  GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDI 119

Query: 179 NHLAPALLSILLFPSLIRGSPSRIINVNS 207
           N     L++  +   +I     +I+N+ S
Sbjct: 120 NLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148

Length = 255

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 60.6 bits (147), Expect = 1e-10
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 6/92 (6%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW-SGKGLPLNIEAMELD 128
           VTG   GIGRE AR+LA  GAHVV+A  NL+AA  +  +   ++ +G+ +     A+++D
Sbjct: 419 VTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAV-----ALKMD 473

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS 160
           +    +V           G + +++NNAGI +
Sbjct: 474 VTDEQAVKAAFADVALAYGGVDIVVNNAGIAT 505

Length = 676

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 13/139 (9%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG+  GIGR +AR L ++GA V+           L   +       G PL +  +  D
Sbjct: 2   IVTGAAQGIGRAVARHLLQAGATVI----------ALDLPFVLL-LEYGDPLRLTPL--D 48

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +    +V           GP+  L+N AG+   G     S + +E+   VN      L  
Sbjct: 49  VADAAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQ 108

Query: 189 LLFPSLIRGSPSRIINVNS 207
            + P +       I+ V S
Sbjct: 109 AVAPHMKDRRTGAIVTVAS 127

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 59.2 bits (143), Expect = 2e-10
 Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 6/151 (3%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           + D T IVTG   GIG    R+ AE GA V +   N +AA ++    + +        N 
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGG------NA 54

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
           +A   D+   DSV     A    LGP+ VL+NNAG    G   K     +E  + +N   
Sbjct: 55  QAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTG 114

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
              +   + P ++     RI+N+ S    VG
Sbjct: 115 ALHMHHAVLPGMVERGAGRIVNIASDAARVG 145

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 19/149 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVR---NLKAANELIQKWQEEWSGKGLPLNIE 123
           T +VTG + G+G +IA  L E+GA VV++ R    L+ A   ++            L I+
Sbjct: 14  TALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA-----------LGID 62

Query: 124 AMEL--DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNH 180
           A+ +  D+     + R +E    R G + +L+NNAG  + G P +    + +++ M +N 
Sbjct: 63  ALWIAADVADEADIERLAEETLERFGHVDILVNNAGA-TWGAPAEDHPVEAWDKVMNLNV 121

Query: 181 LAPALLS-ILLFPSLIRGSPSRIINVNSV 208
               LLS  +   S+I     RIINV SV
Sbjct: 122 RGLFLLSQAVAKRSMIPRGYGRIINVASV 150

Length = 259

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 2e-10
 Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 15/151 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTGS+ GIG + A+ LA +GAHVV+  R        +    E   G+       A+ 
Sbjct: 8   TALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRAS-----AVG 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL   +SV    +      G L  L+ NA     G  +    + Y   M++N  A   L
Sbjct: 63  ADLTDEESVAALMDTAREEFGGLDALVLNAS----GGMESGMDEDYA--MRLNRDAQRNL 116

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDT 217
           +    P +  G  SR++ V S  H   F+ T
Sbjct: 117 ARAALPLMPAG--SRVVFVTS--HQAHFIPT 143

Length = 248

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 19/149 (12%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           I+TG  SGIG   A+ L + GA V +  RN         + Q         +    ++ D
Sbjct: 4   IITGGASGIGLATAKLLLKKGAKVAILDRNENPGA--AAELQAINPK----VKATFVQCD 57

Query: 129 LLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH-----MQVNHLA 182
           + S + +   F +A   + G + +LINNAGI    + + +   G         + VN   
Sbjct: 58  VTSWEQLAAAFKKAIE-KFGRVDILINNAGIL---DEKSYLFAGKLPPPWEKTIDVNLTG 113

Query: 183 P---ALLSILLFPSLIRGSPSRIINVNSV 208
                 L++        G    I+N+ SV
Sbjct: 114 VINTTYLALHYMDKNKGGKGGVIVNIGSV 142

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 15/141 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T  VTG+  GIG  +A    E+GA V+   +                     P       
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE-------------DYPF--ATFV 54

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+    +V +  +      GPL VL+N AGI  +G     S + +++   VN      L
Sbjct: 55  LDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNL 114

Query: 187 SILLFPSLIRGSPSRIINVNS 207
              + P   R     I+ V S
Sbjct: 115 FRAVMPQFRRQRSGAIVTVGS 135

Length = 252

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 58.5 bits (141), Expect = 3e-10
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 5/151 (3%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           +N    IVTG   GIG+ I   LA+ GA VV+   + K A E +     E   +G   ++
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVN---ELGKEG--HDV 58

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
            A++ D+  ++   R  E      G + +L+NNAGI      +K +++ +E  + VN  +
Sbjct: 59  YAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSS 118

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
               +  + P +      RII+++S++   G
Sbjct: 119 VFNTTSAVLPYITEAEEGRIISISSIIGQAG 149

Length = 247

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 10/149 (6%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
                  +VTG+  GIGR +A +LA  GA V++  R     +EL+ +   E         
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDR-----SELVHEVLAE--ILAAGDA 53

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNH 180
                 DL +         A   R G + VLINN G     +P + + ++  E  ++ + 
Sbjct: 54  AHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRS- 112

Query: 181 LAPAL-LSILLFPSLIRGSPSRIINVNSV 208
           L P L     + P ++      I+NV+S+
Sbjct: 113 LFPTLWCCRAVLPHMLERQQGVIVNVSSI 141

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 57.9 bits (140), Expect = 4e-10
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 28/155 (18%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG+ +GIG   A +LA  GA VV+A  +  AA  ++ +         +     A+ +D
Sbjct: 7   IVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQ---------IAGGALALRVD 57

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN-------- 179
           +     V    E      G L +L+NNAG   +           +++ M +N        
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCC 117

Query: 180 -HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            H AP +++        RG  S I+N++S+    G
Sbjct: 118 RHAAPRMIA--------RGGGS-IVNLSSIAGQSG 143

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 58.0 bits (140), Expect = 5e-10
 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 10/150 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG   GIG++I     E+G  VV A  + +   +           +    N+  +  D
Sbjct: 5   IVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADF---------AEAEGPNLFFVHGD 55

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +     V     A   +LG + VL+NNA   S G       + ++  + VN   P  LS 
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSR 115

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTE 218
                LI+    RIIN+ S   +    D+E
Sbjct: 116 YCRDELIKNK-GRIINIASTRAFQSEPDSE 144

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.9 bits (140), Expect = 5e-10
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 13/144 (9%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHV-VMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
               ++TG T GIGR IA      GA V V+       A EL +K             + 
Sbjct: 7   GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK------------GVF 54

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            ++ D+ + D V +  E      G + VL+NNAGI  +   ++F ++ Y + +++N    
Sbjct: 55  TIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGA 114

Query: 184 ALLSILLFPSLIRGSPSRIINVNS 207
              +    P L       I+N+ S
Sbjct: 115 IYTTYEFLPLLKLSKNGAIVNIAS 138

Length = 255

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 57.4 bits (139), Expect = 5e-10
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 15/145 (10%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG   GIG  I ++LA+ G  V       +   E    W +E     L  +   +E D
Sbjct: 4   LVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAE---AWLQE--QGALGFDFRVVEGD 58

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           + S +S           LGP+ VL+NNAGI      +K + + +   +  N     L S+
Sbjct: 59  VSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTN-----LNSV 113

Query: 189 L-----LFPSLIRGSPSRIINVNSV 208
                 +   +      RIIN++SV
Sbjct: 114 FNVTQPVIDGMRERGWGRIINISSV 138

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 57.4 bits (139), Expect = 7e-10
 Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 37/192 (19%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           +     IVTG   G+G   AR L   GA VV++       +E  Q    E       L  
Sbjct: 3   LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDIL----DEEGQAAAAE-------LGD 51

Query: 123 EAM--ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            A    LD+   D      +      G L VL+NNAGI + G  +  + + +   + +N 
Sbjct: 52  AARFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDIN- 110

Query: 181 LAPALLSILLFPSLIR----GSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYS 236
           L    L        ++    GS   IIN++S+   VG                 +L  Y+
Sbjct: 111 LTGVFLGTRAVIPPMKEAGGGS---IINMSSIEGLVGDP---------------ALAAYN 152

Query: 237 GSKLAQVKLETK 248
            SK A V+  TK
Sbjct: 153 ASKGA-VRGLTK 163

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 57.2 bits (139), Expect = 8e-10
 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHV-VMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTG+   IGR IA  LA  G  V V   R+   A  L      E    G      A+
Sbjct: 11  AALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALA----AEIRALGR--RAVAL 64

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           + DL     V       +  LGP+ +L+NNA +F       F++  ++ HM  N  AP +
Sbjct: 65  QADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFV 124

Query: 186 LSILLFPSLIRGSPSRIINV 205
           L+     +L   +   ++N+
Sbjct: 125 LAQAFARALPADARGLVVNM 144

Length = 258

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 57.2 bits (138), Expect = 8e-10
 Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 31/191 (16%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK--GLPL 120
           ++    I+TG+ +GIG+EIA   A +GA VV++  N  AAN ++ + Q+   G+      
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRC 67

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSK--DGYEEHMQV 178
           +I + +     L ++  F+ +   +LG + +L+NNAG    G P+ F      +    ++
Sbjct: 68  DITSEQ----ELSALADFALS---KLGKVDILVNNAG---GGGPKPFDMPMADFRRAYEL 117

Query: 179 NHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGS 238
           N  +   LS L+ P + +     I+ + S               ++   K  ++  Y+ S
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVILTITS---------------MAAENKNINMTSYASS 162

Query: 239 KLAQVKLETKN 249
           K A   L  +N
Sbjct: 163 KAAASHL-VRN 172

Length = 255

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 57.9 bits (140), Expect = 8e-10
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 51  ASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ 110
           AS  Q P PL     +  I TG   GIGR +A + A +G  +++  R+     E  +K  
Sbjct: 256 ASTAQAPSPLAESPRVVAI-TGGARGIGRAVADRFAAAGDRLLIIDRD----AEGAKKLA 310

Query: 111 EEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP 164
           E    + L     +++ D+    +V         R G L VL+NNAGI  + +P
Sbjct: 311 EALGDEHL-----SVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKP 359

Length = 520

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 57.3 bits (139), Expect = 9e-10
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 15/151 (9%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAME 126
           ++TG  SG G  +A++L   G  V+          A EL    +   S       +  ++
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKEL----RRVCSD-----RLRTLQ 54

Query: 127 LDLLSLDSVVRFSEAWNGRLGP--LHVLINNAGIFSIGEPQKF-SKDGYEEHMQVNHLAP 183
           LD+   + + R ++     +G   L  L+NNAGI   G  ++    D Y + M+VN    
Sbjct: 55  LDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGT 114

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
             ++    P L+R +  R++NV+S+   V F
Sbjct: 115 VEVTKAFLP-LLRRAKGRVVNVSSMGGRVPF 144

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 57.0 bits (138), Expect = 9e-10
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG + GIG  IAR LAE+GA V +   +   A E  ++  +++  K      +A +
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVK-----TKAYK 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
            D+ S +SV +  +      G + +LI NAGI        ++ + + + + VN
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVN 117

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 14/147 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHV-VMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             IVT S SGIG+  A  LA+ G  + +    + + A E  ++ +    G       E  
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GV----RAEIR 57

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQ---VNHLA 182
           +LDL  L    +  +    RLG + VL+NNAG         F    ++E  +   V+   
Sbjct: 58  QLDLSDLPEGAQALDKLIQRLGRIDVLVNNAG---AMTKAPFLDMDFDEWRKIFTVDVDG 114

Query: 183 PALLSILLFPSLIR-GSPSRIINVNSV 208
             L S +    +++ G   RIIN+ SV
Sbjct: 115 AFLCSQIAARHMVKQGQGGRIINITSV 141

Length = 256

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 8/91 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG+  GIG+ +AR+   +G  V+    +  A         +             + 
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA--------RFVPVA 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
            DL    S+           GP+ VL+ NAG
Sbjct: 56  CDLTDAASLAAALANAAAERGPVDVLVANAG 86

Length = 257

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           ++  T ++TGS  GIGR  A+     GA V +A  NL+AA     +         +    
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAE---------IGPAA 51

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
            A+ LD+    S+ R   A   R G + +L+NNA +F +      +++ Y+    +N
Sbjct: 52  CAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAIN 108

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 15/149 (10%)

Query: 69  IVTGSTSGIGREIARQLAESGAHV-VMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG   GIG  IAR LA +G  + +    + +      Q+       + L + +     
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQE------LRALGVEVIFFPA 59

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSI--GEPQKFSKDGYEEHMQVNHLAPAL 185
           D+  L +     +A     G +  L+NNAG+     G+    + + ++  + +N   P  
Sbjct: 60  DVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFF 119

Query: 186 LS------ILLFPSLIRGSPSRIINVNSV 208
           L+      +L  P         I+ V+SV
Sbjct: 120 LTQAVAKRMLAQPEPEELPHRSIVFVSSV 148

Length = 256

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 9/147 (6%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           + +   ++TG+++GIG+  A  LA+ GA+ V+AV   +A +E + K +    GK      
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIAEAVSETVDKIKSN-GGKA----- 56

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHL 181
           +A  +D+     V  F+     + G + VL NNAG+  + G   ++  D +++ M V+  
Sbjct: 57  KAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMR 116

Query: 182 APALLSILLFPSLIRGSPSRIINVNSV 208
              L++ +L P ++    S IIN +S 
Sbjct: 117 GTFLMTKMLLPLMMEQGGS-IINTSSF 142

Length = 272

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 11/123 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL- 127
           I+TG++ G+G  IA QL E G HV+   R     N+ + K  E+++     L   +++L 
Sbjct: 5   IITGTSQGLGEAIANQLLEKGTHVISISRT---ENKELTKLAEQYNSN---LTFHSLDLQ 58

Query: 128 DLLSLDSVVR--FSEAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPA 184
           D+  L++      S      +  +H LINNAG+ + I   +K   +    ++ +N LAP 
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIH-LINNAGMVAPIKPIEKAESEELITNVHLNLLAPM 117

Query: 185 LLS 187
           +L+
Sbjct: 118 ILT 120

Length = 251

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 21/144 (14%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG T GIG     +L E+GA VV   R+                   LP  +E +  D
Sbjct: 13  LVTGGTKGIGAATVARLLEAGARVVTTARS---------------RPDDLPEGVEFVAAD 57

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF---SKDGYEEHMQVNHLAPAL 185
           L + +     + A   RLG + +L++  G  S      F   + + +++ + +N LA   
Sbjct: 58  LTTAEGCAAVARAVLERLGGVDILVHVLG-GSSAPAGGFAALTDEEWQDELNLNLLAAVR 116

Query: 186 LSILLFPSLI-RGSPSRIINVNSV 208
           L   L P +I RGS   II+V S+
Sbjct: 117 LDRALLPGMIARGSGV-IIHVTSI 139

Length = 260

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 9/148 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+ +G+G+ IA  LAE+GA +V A       +E  Q+ +    G+       ++ 
Sbjct: 7   VALVTGANTGLGQGIAVGLAEAGADIVGA--GRSEPSETQQQVEAL--GR----RFLSLT 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL  ++++    ++     G + +L+NNAGI    + ++FS+  +++ M VN  +   L
Sbjct: 59  ADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFL 118

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVG 213
           +       + +G   +IIN+ S++ + G
Sbjct: 119 TQAAAKHFLKQGRGGKIINIASMLSFQG 146

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 21/173 (12%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++SGIG   AR LA  GA V +A R +     L  + + E  GK L L     ELD
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAE-GGKALVL-----ELD 60

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +     V    E     LG L +L+NNAGI  +G  +      +   +  N L     + 
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTH 120

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
              P  +  +   I+N++S               V+GR    +   Y+ +K  
Sbjct: 121 AALPHHLLRNKGTIVNISS---------------VAGRVAVRNSAVYNATKFG 158

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 10/140 (7%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE-AMEL 127
            +TG   G+GR  A  LA  GA V +  R     ++ +          G+P +      +
Sbjct: 11  AITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTL---------PGVPADALRIGGI 61

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           DL+   +  R  +  N + G L  L+N AG F  G       D ++    VN       S
Sbjct: 62  DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNAS 121

Query: 188 ILLFPSLIRGSPSRIINVNS 207
               P+L      RI+N+ +
Sbjct: 122 KAALPALTASGGGRIVNIGA 141

Length = 239

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 25/178 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAM 125
             I+TG+  GIGR IA +LA  G ++V+A  NL +AA   IQ+  E         N  A+
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISE------AGYNAVAV 57

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
             D+   D V    +    + G   V++NNAGI  I      +++  ++   VN +   L
Sbjct: 58  GADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVN-VFGVL 116

Query: 186 LSILLFPSLIR--GSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
             I       +  G   +IIN +S               ++G + + +L  YS SK A
Sbjct: 117 FGIQAAARQFKKLGHGGKIINASS---------------IAGVQGFPNLGAYSASKFA 159

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++ GIG  +AR L + G  VV   R +    + I+    E    G P  +   + D
Sbjct: 10  LVTGASVGIGAAVARALVQHGMKVVGCARRV----DKIEALAAECQSAGYP-TLFPYQCD 64

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSK---DGYEEHMQVNHLAPAL 185
           L + + ++    A   +   + V INNAG   +  P+       +G++E   VN LA ++
Sbjct: 65  LSNEEQILSMFSAIRTQHQGVDVCINNAG---LARPEPLLSGKTEGWKEMFDVNVLALSI 121

Query: 186 LSILLFPSLIRGSPSR--IINVNSV 208
            +   + S+   +     IIN+NS+
Sbjct: 122 CTREAYQSMKERNVDDGHIININSM 146

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+TSGIG  IAR+L + G  V +  R  +     +++ +E        +  +   
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA------GVEADGRT 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
            D+ S+  +     A   R GP+ VL+NNAG
Sbjct: 59  CDVRSVPEIEALVAAAVARYGPIDVLVNNAG 89

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 12/149 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG++SGIGR +AR+ A++G +V +A R      + + + + E        ++E   LD
Sbjct: 2   LITGASSGIGRALAREFAKAGYNVALAARRT----DRLDELKAEL--LNPNPSVEVEILD 55

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH---MQVNHLAPAL 185
           +   +            LG L ++I NAG   +G+        ++     +  N L  A 
Sbjct: 56  VTDEERNQLVIAELEAELGGLDLVIINAG---VGKGTSLGDLSFKAFRETIDTNLLGAAA 112

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +     P         ++ ++SV    G 
Sbjct: 113 ILEAALPQFRAKGRGHLVLISSVAALRGL 141

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           I+TG++ GIG   A   AE G  V +  +RN  AA  ++Q  + +  G+ L     A+  
Sbjct: 6   IITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-GGEAL-----AVAA 59

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQ 165
           D+     V+R  EA +  LG L  L+NNAGI    E Q
Sbjct: 60  DVADEADVLRLFEAVDRELGRLDALVNNAGIL---EAQ 94

Length = 248

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 22/155 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + ++TG +SGIG E A +L   G  V+ A R  K  +  + +           L    + 
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACR--KPDD--VARMNS--------LGFTGIL 51

Query: 127 LDLLSLDSVVRFSEA----WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
           LDL   +SV R ++      + RL   + L NNAG    G     S+   E+    N   
Sbjct: 52  LDLDDPESVERAADEVIALTDNRL---YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFG 108

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT 217
              L++LL P+++     RI+  +SVM   G + T
Sbjct: 109 THQLTMLLLPAMLPHGEGRIVMTSSVM---GLIST 140

Length = 256

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 14/94 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRN----LKAANELIQKWQEEWSGKGLPLNI 122
             I+TG +SG+G+ +A++ AE GA+VV+  R      +A  E+     E++ G+ L +  
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI-----EQFPGQVLTV-- 55

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNA 156
              ++D+ + + V +  E  + + G +  LINNA
Sbjct: 56  ---QMDVRNPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 55.6 bits (134), Expect = 5e-09
 Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 18/145 (12%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIGR   ++ A +G  VV+A RN++ A E       +           A+ +D
Sbjct: 9   LVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDH---------HALAMD 59

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQ-----KFSKDGYEEHMQVNHLAP 183
           +     +    E  +   G + VL+NNAG+    +P        + + +     +N    
Sbjct: 60  VSDEAQIREGFEQLHREFGRIDVLVNNAGVT---DPTMTATLDTTLEEFARLQAINLTGA 116

Query: 184 ALLSILLFPSLIRGSP-SRIINVNS 207
            L++      +I     + I+NV S
Sbjct: 117 YLVAREALRLMIEQGHGAAIVNVAS 141

Length = 520

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.6 bits (135), Expect = 5e-09
 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIG  IA  LA  GAHVV    ++ AA E +        G  L L+I A    
Sbjct: 214 LVTGAARGIGAAIAEVLARDGAHVV--CLDVPAAGEALAAVANRVGGTALALDITA---- 267

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
               D+  R +E    R G L ++++NAGI
Sbjct: 268 ---PDAPARIAEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 54.7 bits (132), Expect = 6e-09
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIG  IA++L E G  V +   N + A     K  ++  GK +     A++ D
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAI-----AVKAD 59

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           +   D V           G L+V++NNAG+
Sbjct: 60  VSDRDQVFAAVRQVVDTFGDLNVVVNNAGV 89

Length = 256

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 54.4 bits (131), Expect = 6e-09
 Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 30/182 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++T +  GIGR IA   A  GA+V+         NE  +K +E   G G+        
Sbjct: 4   VALITAAAQGIGRAIALAFAREGANVIAT-----DINE--EKLKELERGPGIT----TRV 52

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+   + V   ++      G + VL N AG    G       D ++  M +N  +  L+
Sbjct: 53  LDVTDKEQVAALAK----EEGRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLM 108

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLE 246
              + P ++      IIN++SV           +  V  R        YS +K A + L 
Sbjct: 109 IKAVLPKMLARKDGSIINMSSV--------ASSIKGVPNR------FVYSTTKAAVIGL- 153

Query: 247 TK 248
           TK
Sbjct: 154 TK 155

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 54.5 bits (131), Expect = 6e-09
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 4/146 (2%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           +ND   +VTG++ GIGRE A   A  GA V++  RN +   ++     EE  G   P   
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEE--GGRQPQ-W 58

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG-YEEHMQVNHL 181
             ++L   + ++  + ++        L  +++NAG+     P        +++  QVN  
Sbjct: 59  FILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVN 118

Query: 182 APALLSILLFPSLIRGSPSRIINVNS 207
           A  +L+  L P L++     ++  +S
Sbjct: 119 ATFMLTQALLPLLLKSDAGSLVFTSS 144

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 54.5 bits (131), Expect = 8e-09
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 13/149 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSG--KGLPLNIEAME 126
           IVTG + GIGR I R   E+GA VV   R   A   L  +      G  K +P ++   E
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVTKEE 72

Query: 127 LDLLSLDSV-VRFSEAWNGRLGPLHVLINNAGIFSIGE-PQKFSKDGYEEHMQVNHLAPA 184
            D+ +L SV V        R G +  L+NNAG     +   + S   + + + +N ++  
Sbjct: 73  -DIKTLISVTVE-------RFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYF 124

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           L S    P L R S   IIN++S++  +G
Sbjct: 125 LASKYALPHL-RKSQGNIINLSSLVGSIG 152

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 54.2 bits (130), Expect = 9e-09
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 20/156 (12%)

Query: 65  DLT---CIVTGSTSGIGREIARQLAESGAHVVM---AVRNLKA-ANELIQKWQEEWSGKG 117
           DL+    +VTG++ GIG EIAR L   GA V +    V  L+A A EL ++       K 
Sbjct: 3   DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGER------VKI 56

Query: 118 LPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQ 177
            P N       L   D V    +     L  + +L+NNAGI   G   + S + ++  ++
Sbjct: 57  FPAN-------LSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLE 109

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           VN  A   L+  L   ++R    RIIN+ SV+   G
Sbjct: 110 VNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTG 145

Length = 245

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 53.9 bits (130), Expect = 9e-09
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 7/128 (5%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG  SGIG  IA++LA  GA VV+A  ++            +   + L +       D
Sbjct: 5   LVTGGASGIGLAIAKRLAAEGAAVVVA--DIDPEIAEKVAEAAQGGPRALGVQC-----D 57

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           + S   V    E      G L ++++NAGI +     + S + +   M +N     L+S 
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSR 117

Query: 189 LLFPSLIR 196
             F  +  
Sbjct: 118 EAFRIMKS 125

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 54.1 bits (130), Expect = 9e-09
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHV-VMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTG + GIGR  A  LA+ G  V V   +NL AA E++       +G G    ++A 
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVN--LITQAG-GKAFVLQA- 58

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
             D+   + VV    A +    PL  L+NNAGI
Sbjct: 59  --DISDENQVVAMFTAIDQHDEPLAALVNNAGI 89

Length = 247

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 7/116 (6%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
                ++TG + GIG  IA  L   G  V +  R+ K   E       E + KG  L + 
Sbjct: 5   KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAA----ELNNKGNVLGLA 60

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
           A   D+     V R  +A     G L VLI NAG+      ++ + + +   +  N
Sbjct: 61  A---DVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTN 113

Length = 237

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 23/154 (14%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
             +     IVTG  + IG  +AR L  +GA V +   +      +            L  
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA---------SLGE 52

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNA------GIFSIGEPQKFSKDGYEE 174
               +  D+    ++ R       R G + +L+N A      G+ S       S+  +  
Sbjct: 53  RARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS-------SRADWLA 105

Query: 175 HMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
            + VN ++ A+L+    P L RG    I+N  S+
Sbjct: 106 ALDVNLVSAAMLAQAAHPHLARGG-GAIVNFTSI 138

Length = 261

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 22/144 (15%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           VTG++SGIG+  AR+LA  G  V  A R +    +L              L +  + LD+
Sbjct: 8   VTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------------LGVHPLSLDV 55

Query: 130 L---SLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQ--VNHLAPA 184
               S+ + V    A  GR   + VL+NNAG  S G  +    D  E   Q  VN    A
Sbjct: 56  TDEASIKAAVDTIIAEEGR---IDVLVNNAGYGSYGAIEDVPID--EARRQFEVNLFGAA 110

Query: 185 LLSILLFPSLIRGSPSRIINVNSV 208
            L+ L+ P +      RIIN++S+
Sbjct: 111 RLTQLVLPHMRAQRSGRIINISSM 134

Length = 273

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 37/171 (21%), Positives = 62/171 (36%), Gaps = 24/171 (14%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++ GIG   AR L   G  V +  R+             +     L L       D
Sbjct: 4   LVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAA----QELEGVLGL-----AGD 54

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +     V R  +A     G L  L+NNAG+  +   ++ + + +   +  N         
Sbjct: 55  VRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIH 114

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
              P+L+R     I+NV S               ++G+  +     Y+ SK
Sbjct: 115 KAAPALLRRGGGTIVNVGS---------------LAGKNAFKGGAAYNASK 150

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 25/149 (16%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE---LI-QKWQEEWSGKGLPLNIEA 124
           +VTG+ SGIGRE A   A  GA VV +  +  AA     LI                  A
Sbjct: 319 VVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAH----------A 368

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
             +D+   D++  F+E      G   +++NNAGI   G     S + ++  + VN     
Sbjct: 369 YRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVN----- 423

Query: 185 LLSIL----LF-PSLI-RGSPSRIINVNS 207
           L  ++    LF   ++ RG+   I+NV S
Sbjct: 424 LWGVIHGCRLFGRQMVERGTGGHIVNVAS 452

Length = 582

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 12/101 (11%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAA-NELIQKWQEEWSGK 116
             +     +VTG +SGIG      L E+GA V +  R+   L +A   L +K+       
Sbjct: 4   IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGA---- 59

Query: 117 GLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
                + A   D+L    V  F+ A   R G + +L+NNAG
Sbjct: 60  ----RLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 7/93 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTG++SGIG+ IA +LA +GA+VV+  R    AA E++++  +   GK +     A+
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEE-IKAVGGKAI-----AV 58

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           + D+   + VV   ++     G L +L+NNAG+
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGL 91

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG  +G+G+ +A  LAE+G  +V    N+    E I++      G+   L++ A   D
Sbjct: 14  VVTGCDTGLGQGMALGLAEAGCDIVGI--NIVEPTETIEQVTAL--GRRF-LSLTA---D 65

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L  +D +    E      G + +L+NNAG+    +  +FS+  +++ M +N  +   +S 
Sbjct: 66  LRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ 125

Query: 189 LLFPSLI-RGSPSRIINVNSVMHYVG 213
                 I +G+  +IIN+ S++ + G
Sbjct: 126 AAAKHFIAQGNGGKIINIASMLSFQG 151

Length = 253

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 17/148 (11%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   IVTG + GIG+ +  +L E G++V+       + N+                 ++ 
Sbjct: 6   DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND-----------------VDY 48

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
            ++D+ + + V++  +    + G + +L+NNAGI S G      +D ++  + VN     
Sbjct: 49  FKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIF 108

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYV 212
           L+S    P +++     IIN+ SV  + 
Sbjct: 109 LMSKYTIPYMLKQDKGVIINIASVQSFA 136

Length = 258

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAV--RNLKAANELIQKWQEEWSGKGLPLNIEA 124
             IVTG  +G+G+  A  LA++GA +++     N      LI+K      G+     +  
Sbjct: 17  VAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEK-----EGR----KVTF 67

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +++DL   +S  +  +      G + +L+NNAG        ++  + +   M +N  +  
Sbjct: 68  VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVY 127

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            LS  +   + +    +IIN+ S++ + G
Sbjct: 128 HLSQAVAKVMAKQGSGKIINIASMLSFQG 156

Length = 258

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 7/146 (4%)

Query: 69  IVTGST--SGIGREIARQLAESGAHVVMAV-----RNLKAANELIQKWQEEWSGKGLPLN 121
           +VTG +   GIG  I ++LAE+GA +         + +    +  ++ Q +       + 
Sbjct: 10  VVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVK 69

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           + +MELDL   D+          +LG  H+L+NNA   +  +    + +  ++H  VN  
Sbjct: 70  VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVR 129

Query: 182 APALLSILLFPSLIRGSPSRIINVNS 207
           A  LLS        + S  RIIN+ S
Sbjct: 130 ATTLLSSQFARGFDKKSGGRIINMTS 155

Length = 256

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 9/96 (9%)

Query: 65  DLT---CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           DLT    +VTG++ GIG  IA+ LA+ GAHV+++ R L     +         GK     
Sbjct: 5   DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-GGKA---- 59

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
            EA+   +  ++ +         R G L +L+NNA 
Sbjct: 60  -EALACHIGEMEQIDALFAHIRERHGRLDILVNNAA 94

Length = 252

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 50/181 (27%), Positives = 71/181 (39%), Gaps = 22/181 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V G    +G  +   LAE G  V +A  N + A  + Q+   E+ G+G         
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY-GEG---MAYGFG 59

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D  S  SV+  S   +   G + +L+ NAGI        F    ++  +QVN L    L
Sbjct: 60  ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVN-LVGYFL 118

Query: 187 SILLFPSLI--RGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVK 244
               F  L+   G   RII +NS    VG              K+ S  GYS +K   V 
Sbjct: 119 CAREFSRLMIRDGIQGRIIQINSKSGKVG-------------SKHNS--GYSAAKFGGVG 163

Query: 245 L 245
           L
Sbjct: 164 L 164

Length = 259

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 14/113 (12%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
             L  +VTG  SG+G     +L   GA VV+         E + K  +         N  
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG-ETVAKLGD---------NCR 50

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQK-FSKDGYEEH 175
            + +D+ S   V         + G L +++N AG   I    K ++K G + H
Sbjct: 51  FVPVDVTSEKDVKAALALAKAKFGRLDIVVNCAG---IAVAAKTYNKKGQQPH 100

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 10/148 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLP-LNIEAME 126
           +VTG T G+G  IAR  AE GA  ++   RN +           E    G   + ++A  
Sbjct: 10  LVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQ----AAELEALGAKAVFVQA-- 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL  ++   R   A +   G L  L+N AG+   G     S + ++ H  VN  AP  L
Sbjct: 64  -DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFL 122

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVG 213
                  +  R +   I+N+ S+  + G
Sbjct: 123 MQEAIKLMRRRKAEGTIVNIGSMSAHGG 150

Length = 260

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 6/145 (4%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TGS  GIG  +A  LAE GA +++     + A   + K ++E       +   A   +
Sbjct: 13  LITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE------GIKAHAAPFN 66

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +     V    E     +GP+ VLINNAGI       +F +  + + + VN  A  L+S 
Sbjct: 67  VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQ 126

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVG 213
            +   +++    +IIN+ S+   +G
Sbjct: 127 AVARYMVKRQAGKIINICSMQSELG 151

Length = 254

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 15/131 (11%)

Query: 57  PLPLP---PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW 113
             P P   P      +V G++SGIG   A +LA +G  V +  R ++   EL+ K + + 
Sbjct: 4   FEPHPDRRPA-----LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD- 57

Query: 114 SGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYE 173
            G+ +     A  LD+   DSV  F       LG + VL++ AG    G+  + S + +E
Sbjct: 58  GGEAV-----AFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFE 112

Query: 174 EHMQVNHLAPA 184
             +Q+ HL  A
Sbjct: 113 SQVQI-HLVGA 122

Length = 274

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 13/142 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG +SGIGR +A     +G  V    R  +    L                  A++
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA------------GFTAVQ 50

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+    ++ R +E      G L VLINNAG  ++G       +      + N  A   +
Sbjct: 51  LDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGV 110

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           +  LFP L+R S   ++N+ SV
Sbjct: 111 TRALFP-LLRRSRGLVVNIGSV 131

Length = 274

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 14/145 (9%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VT S+ GIG  +AR+L + GA VV++ RN +     ++K  +E    G    + A++ D
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEEN----LEKALKELKEYG---EVYAVKAD 56

Query: 129 LLSLDSVVRF-SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL---APA 184
           L   D +     EAW   LG +  L+ NAG     EP    + GY + ++   L   AP 
Sbjct: 57  LSDKDDLKNLVKEAWEL-LGGIDALVWNAGNVRC-EPCMLHEAGYSDWLEAALLHLVAPG 114

Query: 185 LLSILLFPS-LIRGSPSRIINVNSV 208
            L+ LL  + L +     ++ ++SV
Sbjct: 115 YLTTLLIQAWLEKKMKGVLVYLSSV 139

Length = 259

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 51.3 bits (124), Expect = 4e-08
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           T ++TG   G+GR +AR LAE GA  +V+  R+   A         E    G  + + A 
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGA-AALLAELEAAGARVTVVAC 60

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
             D+   D++     A     GPL  +I+ AG+
Sbjct: 61  --DVADRDALAAVLAAIPAVEGPLTGVIHAAGV 91

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.0 bits (125), Expect = 5e-08
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 7/140 (5%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTGS+ GIG+ IA +LAE G  + +   R+ KAA E      EE    G      A++ 
Sbjct: 8   LVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEET----AEEIEALG--RKALAVKA 61

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           ++  ++ +       +   G L V +NNA    +    +  +  ++  M +N  A    +
Sbjct: 62  NVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCA 121

Query: 188 ILLFPSLIRGSPSRIINVNS 207
                 + +    +II+++S
Sbjct: 122 QEAAKLMEKVGGGKIISLSS 141

Length = 250

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 51.8 bits (125), Expect = 6e-08
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 21/130 (16%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR------NLK-----AANELIQKW 109
             ++  T  +TG++ GIG  IA + A  GA++V+A +       L      AA E+    
Sbjct: 2   MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEI---- 57

Query: 110 QEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSK 169
            E   G+ LPL       D+   D V         R G + + +NNA   ++   +    
Sbjct: 58  -EAAGGQALPL-----VGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPM 111

Query: 170 DGYEEHMQVN 179
             ++   Q+N
Sbjct: 112 KRFDLMQQIN 121

Length = 273

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 7e-08
 Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 40/182 (21%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVM----AVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           +TG + G+GR IA +LA  GA V++     +R    A+ +     E   GK L L  +  
Sbjct: 11  ITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAG-IEAAGGKALGLAFDVR 69

Query: 126 ELDLL--SLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN---- 179
           +      +LD+ V          G L +L+NNAGI +     + S + +++ + VN    
Sbjct: 70  DFAATRAALDAGVE-------EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGF 122

Query: 180 -HLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSG 237
            ++  A L     P +IR     RI+N+ S               V+G R     + Y+ 
Sbjct: 123 FNVTQAAL-----PPMIRARRGGRIVNIAS---------------VAGVRGNRGQVNYAA 162

Query: 238 SK 239
           SK
Sbjct: 163 SK 164

Length = 249

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 9/145 (6%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           +TG++ G GR       E G  VV   R+     +L +K+ +    + LPL      LD+
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGD----RLLPLA-----LDV 58

Query: 130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSIL 189
               +V    E      G L +++NNAG    G  ++ ++      +  N      ++  
Sbjct: 59  TDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQA 118

Query: 190 LFPSLIRGSPSRIINVNSVMHYVGF 214
           + P L       II ++S+     F
Sbjct: 119 VLPYLREQRSGHIIQISSIGGISAF 143

Length = 275

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           +TG+ SG+GR IA + A  G  + +A  N +   E ++  +E   G G          D+
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-GGDGF-----YQRCDV 58

Query: 130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSIL 189
                +   ++A   + G + V++NNAG+ S G  ++ S + ++  + +N +        
Sbjct: 59  RDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKA 118

Query: 190 LFPSLIRGSPSRIINVNS 207
             P   R    RI+N+ S
Sbjct: 119 FLPLFKRQKSGRIVNIAS 136

Length = 270

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 51.2 bits (123), Expect = 8e-08
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG + GIG+ IA +LAE GA VV+  R +  AA E+  +  EE  GK + +       
Sbjct: 2   LVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEI-EELGGKAVVV-----RA 55

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNA 156
           D+     V     A   R G L VL++NA
Sbjct: 56  DVSQPQDVEEMFAAVKERFGRLDVLVSNA 84

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG +SG GR +A+    +G  VV  VR+  A  +              P    A  
Sbjct: 6   TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFE---------ALHPDRALARL 56

Query: 127 LDLLSLDS---VVRFSEAWNGRLGPLHVLINNAGI 158
           LD+   D+   VV  +EA     GP+ VL+NNAG 
Sbjct: 57  LDVTDFDAIDAVVADAEA---TFGPIDVLVNNAGY 88

Length = 277

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 51.3 bits (123), Expect = 9e-08
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG   GIG+ IA +LA+ G  V +A  N + A E  ++  +     G      A +
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ----AG--GKAVAYK 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           LD+   D V    +    + G   V++NNAG+
Sbjct: 56  LDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGV 87

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 9e-08
 Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 40/169 (23%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           N    I+TG++SGIGR  A+  A  GA VV+  R     ++L+ +             I 
Sbjct: 5   NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAE-------------IR 51

Query: 124 AMELDLLSLDSVVRFSEAWNGRL--------GPLHVLINNAGIF-SIGEPQKFSKDGYEE 174
           A   + ++L   VR  EA+   L        G L +  NNAG    +G   + S +G+ E
Sbjct: 52  AEGGEAVALAGDVR-DEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRE 110

Query: 175 HMQVN---------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
            +  N         H  PA+L+        RG  S I     V H  GF
Sbjct: 111 TLATNLTSAFLGAKHQIPAMLA--------RGGGSLIFTSTFVGHTAGF 151

Length = 254

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 26/156 (16%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG  SGIGR +  +    GA V +  R+ +    L Q++ +         ++  +E D
Sbjct: 10  LITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGD---------HVLVVEGD 60

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIF----SIGE--PQKFSKDGYEEHMQVN--- 179
           + S     R  +      G L   + NAGI+    S+ +   +      ++E   VN   
Sbjct: 61  VTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDT-AFDEIFNVNVKG 119

Query: 180 --HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
               A A L     P+L     S I  +++   Y G
Sbjct: 120 YLLGAKAAL-----PALKASGGSMIFTLSNSSFYPG 150

Length = 263

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 5/111 (4%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
            VTG+ SGIG+ IA  LA++GA V  A+ +L+  + L +  +   +     + I A    
Sbjct: 12  FVTGAGSGIGQRIAIGLAQAGADV--ALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS 69

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
              L + V  +EA    LG L + +N AGI +    ++  ++ ++  M +N
Sbjct: 70  KADLRAAVARTEA---ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDIN 117

Length = 254

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGKGLPL 120
            D   ++TG   G+GR +A  LA+ GA + +   N   L+ A         E   +G   
Sbjct: 4   KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE--VRGYAA 61

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG 171
           N+   E D      V           G L+ LINNAGI   G   K  KDG
Sbjct: 62  NV-TDEED------VEATFAQIAEDFGQLNGLINNAGILRDGLLVKA-KDG 104

Length = 253

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 16/149 (10%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL- 127
           +VTG++SG+G   A+ LA++GA VV+A R ++   EL    + E   +G   ++ ++++ 
Sbjct: 13  LVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKEL----RAEIEAEGGAAHVVSLDVT 68

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D  S+ + V  +E      G + +L+NN+G+ +  +    +   ++     N      ++
Sbjct: 69  DYQSIKAAVAHAET---EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVA 125

Query: 188 ILLFPSLI---RGSPS-----RIINVNSV 208
             +   +I   +G+ +     RIIN+ SV
Sbjct: 126 QEVAKRMIARAKGAGNTKPGGRIINIASV 154

Length = 258

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 10/108 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
              V G+  G+G  IAR+ A  G  V +A R       L+     +  G        A+ 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAK-----AVP 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAG---IFSIGE--PQKFSK 169
            D    D V+   +     +GPL VL+ NAG    F I E  P+ F K
Sbjct: 56  TDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEK 103

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 17/143 (11%)

Query: 59  PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGL 118
           P+  +     +VTG+  GIG E+AR+L   GA + +          L      E  G   
Sbjct: 3   PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAAL----AAELGGDDR 58

Query: 119 PLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQV 178
            L + A   DL ++ +    +     R G + V++ NAGI S G   +   D +   + V
Sbjct: 59  VLTVVADVTDLAAMQAAAEEAVE---RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDV 115

Query: 179 N-----HLAPALLSILLFPSLIR 196
           N     H   A L     P+LI 
Sbjct: 116 NLLGVFHTVRATL-----PALIE 133

Length = 296

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 49.5 bits (118), Expect = 3e-07
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 21/155 (13%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
             ++D T +VTG++ G+G ++A+  A +GA V++  R+ K     ++K  +     G P 
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKK----LEKVYDAIVEAGHP- 56

Query: 121 NIEAMELDLLSLDS------VVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE 173
              A+  DL+S +           +EA  G+L G +H     AG F    P  F      
Sbjct: 57  EPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHC----AGYFYALSPLDFQT--VA 110

Query: 174 EHM---QVNHLAPALLSILLFPSLIRGSPSRIINV 205
           E +   ++N +AP  L+  LFP L +   + +I V
Sbjct: 111 EWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFV 145

Length = 239

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 11/141 (7%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE-EWSGKGLPLNI 122
            D   +VTG+  GIGRE A   A  GA V++  R  +   +L   + E E +G   P  I
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEE---KLEAVYDEIEAAGGPQPAII 67

Query: 123 EAMELDLLSLDS--VVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN 179
               LDLL+       + ++    + G L  +++NAG+     P ++   + +++ MQVN
Sbjct: 68  ---PLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVN 124

Query: 180 HLAPALLSILLFPSLIRGSPS 200
             A  +L+  L P L+  SP+
Sbjct: 125 VNATFMLTQALLP-LLLKSPA 144

Length = 247

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 13/118 (11%)

Query: 69  IVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG   G+G E+AR LAE GA H+V+  R+  A +   +    E   +G    +  +  
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRS-GAPDPEAEALLAELEARG--AEVTVVAC 60

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           D+   D+V            PL  +I+ AG+          +D    +M     A  L
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAGVL---------RDALLANMTAEDFARVL 109

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 16/153 (10%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
            D   ++TG+   IG+   + L  +GA +++A  N  A  +L ++    +  +     + 
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNR-----VI 55

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF---SKDGYEEHMQVNH 180
           A+ELD+ S +S+    E++  + G + +LINNA         +F     + + E + VN 
Sbjct: 56  ALELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVN- 114

Query: 181 LAPALLSILLFPSLI----RGSPSRIINVNSVM 209
           L  A L    F  L     +GS   IIN+ S+ 
Sbjct: 115 LGGAFLCSQAFIKLFKKQGKGS---IINIASIY 144

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL------IQKWQEEWSGKGLPL 120
           T  +TG++ GIG+ IA + A  GA+VV+A +  +   +L        +  E   GK LP 
Sbjct: 5   TLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPC 64

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            ++  + D +   +V +  E + G    + +L+NNA   S+          Y+  M VN 
Sbjct: 65  IVDIRDEDQVR-AAVEKAVEKFGG----IDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119

Query: 181 LAPALLSILLFPSLIRGSPSRIINV 205
               L S    P L +     I+N+
Sbjct: 120 RGTYLCSKACLPYLKKSKNPHILNL 144

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE-WSGKGLPLNIEAM 125
             +VTG+  GIGR +A + A  GA VV+  R     +EL+ +   E  +  G  L + A 
Sbjct: 10  VVVVTGAAQGIGRGVALRAAAEGARVVLVDR-----SELVHEVAAELRAAGGEALALTA- 63

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
             DL +         A     G + VLINN G
Sbjct: 64  --DLETYAGAQAAMAAAVEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 8e-07
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++ GIG   A   A  G H+ +  R+  A    ++    +       +++    
Sbjct: 9   RVLITGASKGIGAAAAEAFAAEGCHLHLVARDADA----LEALAADLRAAH-GVDVAVHA 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
           LDL S ++  + +       G + +L+NNAG
Sbjct: 64  LDLSSPEAREQLAA----EAGDIDILVNNAG 90

Length = 259

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 48.3 bits (115), Expect = 9e-07
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 10/96 (10%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGKGLPLN 121
           D T +VTG  SGIG+ +A  L  +GA V++  RN   L AA E I    E   G G    
Sbjct: 7   DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI----EALKGAG---A 59

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
           +     D+   D V R  +A     G LH +++ AG
Sbjct: 60  VRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAG 95

Length = 276

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 48.1 bits (114), Expect = 9e-07
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG+++GIG+ +A    E+GA V +A R+L A    ++K  +E    G    +  +  D
Sbjct: 13  LITGASTGIGKRVALAYVEAGAQVAIAARHLDA----LEKLADEIGTSG--GKVVPVCCD 66

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSI 161
           +     V    +     LG + + + NAGI ++
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITV 99

Length = 253

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 48.2 bits (115), Expect = 9e-07
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 8/91 (8%)

Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIGR IA QL E+GA V +  R +        +  E   GK +P+  +    
Sbjct: 6   ALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDH--- 62

Query: 128 DLLSLDSVVR--FSEAWNGRLGPLHVLINNA 156
              S D  V   F      + G L +L+NNA
Sbjct: 63  ---SDDDEVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 26/153 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTG++ G+G  IAR  A  GA VV+   R+ ++A  +  +  E            A+
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGE---------RAIAI 52

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHM--------- 176
           + D+   D V    E      GP+  ++NNA I        F  D  +            
Sbjct: 53  QADVRDRDQVQAMIEEAKNHFGPVDTIVNNALI-----DFPFDPDQRKTFDTIDWEDYQQ 107

Query: 177 QVNHLAPALLSIL--LFPSLIRGSPSRIINVNS 207
           Q+       L++L  + P        R+IN+ +
Sbjct: 108 QLEGAVKGALNLLQAVLPDFKERGSGRVINIGT 140

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 47.8 bits (113), Expect = 1e-06
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 15/155 (9%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG++ GIGR IA++LA  GA V +   N K  A E + + Q   S  G   +I A   
Sbjct: 8   LVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ---SNGGSAFSIGA--- 61

Query: 128 DLLSLDSVVRFSEAWNGRL------GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           +L SL  V     + +  L          +LINNAGI      ++ ++  ++  + VN  
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAK 121

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD 216
           AP  +       L     SRIIN++S    +   D
Sbjct: 122 APFFIIQQALSRL--RDNSRIINISSAATRISLPD 154

Length = 252

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 20/150 (13%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVR---NL-KAANELIQKWQEEWSGKGLPL 120
               +V+G   G+GR +A + A +GA VV+A R    L + A E+          + L  
Sbjct: 5   GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-----GRRAL-- 57

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSK---DGYEEHMQ 177
              A+  D+   D           R G +  L+NNA  F +   +  +      +   ++
Sbjct: 58  ---AVPTDITDEDQCANLVALALERFGRVDALVNNA--FRVPSMKPLADADFAHWRAVIE 112

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNS 207
           +N L    L+    P+L     S I+ +NS
Sbjct: 113 LNVLGTLRLTQAFTPALAESGGS-IVMINS 141

Length = 258

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 26/183 (14%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           D   +VTGS  GIGR IA +LA+ G+ VV+ A +  +  NE + K  +E  G+G+     
Sbjct: 6   DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL-KMVKENGGEGI----- 59

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGY-EEHMQVNHLA 182
            +  D+ + +     ++A   R G   +L+NNAG+  +  P     D   ++H+  +  +
Sbjct: 60  GVLADVSTREGCETLAKATIDRYGVADILVNNAGL-GLFSPFLNVDDKLIDKHISTDFKS 118

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQ 242
               S  L   +  G    I+N+ S               V+G R    L  Y   K A 
Sbjct: 119 VIYCSQELAKEMREG--GAIVNIAS---------------VAGIRPAYGLSIYGAMKAAV 161

Query: 243 VKL 245
           + L
Sbjct: 162 INL 164

Length = 252

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG+ SG GRE+A +LA  G +V+  V+       L    + E + +GL L +E  +
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTAL----RAEAARRGLALRVE--K 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LDL       + +E W+     + VL+NNAGI   G       +   E  + N   P  L
Sbjct: 58  LDLTDAIDRAQAAE-WD-----VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLEL 111

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           +      ++     +++  +S+
Sbjct: 112 TQGFVRKMVARGKGKVVFTSSM 133

Length = 257

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 8/93 (8%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           +TG++SGIG+ +AR+ A  GA + +  R      + +Q +            +     D+
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARR----TDALQAFAARL---PKAARVSVYAADV 59

Query: 130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG 162
              D++   +  +    G   V+I NAGI S+G
Sbjct: 60  RDADALAAAAADFIAAHGLPDVVIANAGI-SVG 91

Length = 257

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 46/202 (22%), Positives = 73/202 (36%), Gaps = 41/202 (20%)

Query: 69  IVTGSTSGIGREIARQL-----AESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           +VTG+ SG+G  I  +L           +++A RNL+ A    +          +  +  
Sbjct: 5   LVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDYV 64

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI--------------------FSIGE 163
              +DL ++ SV   ++    R   L  L  NAGI                    F++  
Sbjct: 65  --LVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTN 122

Query: 164 P-------------QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVM 209
           P              K ++DG  E  Q N      L   L P L R    S+II  +S+ 
Sbjct: 123 PTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSSLN 182

Query: 210 HYVGFVDTEDMNVVSGRRKYTS 231
               +   ED+  + G   Y+S
Sbjct: 183 ASPKYFSLEDIQHLKGPAPYSS 204

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 14/89 (15%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG T GIG  IAR    +GA VV+  R                +  G P    A   D
Sbjct: 10  LVTGGTRGIGAGIARAFLAAGATVVVCGRR------------APETVDGRPAEFHA--AD 55

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
           +   D V    +A   R G L VL+NNAG
Sbjct: 56  VRDPDQVAALVDAIVERHGRLDVLVNNAG 84

Length = 252

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHV-VMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             ++TG++ GIGR  A   A  G  V +   R+  AA E          G+        +
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADA-VRAAGGRAC-----VV 57

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP 164
             D+ +   V+   +A     G L  L+NNAGI +   P
Sbjct: 58  AGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMP 96

Length = 248

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+ SG G   AR  A  G  +V+A     A    + +   E   +G    +  + 
Sbjct: 8   VAVITGAASGFGLAFARIGAALGMKLVLADVQQDA----LDRAVAELRAQGAE--VLGVR 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG 162
            D+     V   ++A   R G +H+L NNAG+ + G
Sbjct: 62  TDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGG 97

Length = 287

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 9/119 (7%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P++    ++TG++SGIG+  A   A  GA +V+A R+ +A   + ++ +       L   
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA------LGAE 57

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
           +  +  D+   D V   +       G + V +NN G+ ++G   +F +   E H QV  
Sbjct: 58  VLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVG---RFEETPIEAHEQVIQ 113

Length = 330

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 40/149 (26%), Positives = 49/149 (32%), Gaps = 29/149 (19%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           +TG+ SGIGR  A   A  G  V     N      L  +            N     LD 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAG--------NAWTGALD- 56

Query: 130 LSLDSVVRFSEAWNGRL--------GPLHVLINNAGIFSIGEPQKFSKDGYEEHM---QV 178
                 V    AW+  L        G L VL NNAGI   G    F     E H     +
Sbjct: 57  ------VTDRAAWDAALADFAAATGGRLDVLFNNAGILRGG---PFEDIPLEAHDRVIDI 107

Query: 179 NHLAPALLSILLFPSLIRGSPSRIINVNS 207
           N       +    P L     +R+IN +S
Sbjct: 108 NVKGVLNGAHAALPYLKATPGARVINTSS 136

Length = 260

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 13/148 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG TSGIG E ARQ    GA V +  R+  +    ++  + E     L +  +A +
Sbjct: 8   TALITGGTSGIGLETARQFLAEGARVAITGRDPAS----LEAARAELGESALVIRADAGD 63

Query: 127 L-DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           +    +L   +   EA+    G L  +  NAG+      + + +  ++     N   P  
Sbjct: 64  VAAQKALAQALA--EAF----GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYF 117

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVG 213
           L   L P L   + S ++N  S+  ++G
Sbjct: 118 LIQALLPLLANPA-SIVLN-GSINAHIG 143

Length = 249

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 46.1 bits (109), Expect = 5e-06
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           I+TG  +G+G+ +A  LA++GA +V     +  A E     Q E  G+     I A  + 
Sbjct: 12  IITGCNTGLGQGMAIGLAKAGADIVGV--GVAEAPETQA--QVEALGRKFHF-ITADLIQ 66

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
              +DS+V  S+A    +G + +LINNAGI    +  +F    +++ + +N      LS 
Sbjct: 67  QKDIDSIV--SQAVE-VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ 123

Query: 189 LLFPSLIR-GSPSRIINVNSVMHYVG 213
            +    ++ G+  +IIN+ S++ + G
Sbjct: 124 AVAKQFVKQGNGGKIINIASMLSFQG 149

Length = 251

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 11/139 (7%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +TG    IG  IAR L  +G  V +        A+ L  +      G        A++ D
Sbjct: 11  ITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAA-----ALQAD 65

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           LL  D++     A     G L  L+NNA  F        ++  +++    N  AP  LS 
Sbjct: 66  LLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQ 125

Query: 189 LLFPSL--IRGSPSRIINV 205
              P L   RG+   I+N+
Sbjct: 126 AAAPQLRKQRGA---IVNI 141

Length = 249

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 15/152 (9%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           ++D   +VTG+  G+G  IA   AE+GA V++A R     +E+     E+    G   ++
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEV----AEQIRAAGRRAHV 63

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGE-PQKF---SKDGYEEHMQV 178
            A   DL   ++    +       G L +++NN G    G  P      S     +    
Sbjct: 64  VAA--DLAHPEATAGLAGQAVEAFGRLDIVVNNVG----GTMPNPLLSTSTKDLADAFTF 117

Query: 179 NHLAPALLSILLFPSLIRGSPS-RIINVNSVM 209
           N      L++   P ++  S    +IN++S M
Sbjct: 118 NVATAHALTVAAVPLMLEHSGGGSVINISSTM 149

Length = 263

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 46.1 bits (109), Expect = 6e-06
 Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 23/157 (14%)

Query: 68  CIVTGSTSGIGREIARQLAES----GAHVVMAVRNLKAANELIQKWQEEWSGKGL---PL 120
           C+VTG++ G GR IA++LA+     G+ +V++ RN +A  +L  +   E SG  +    L
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 121 NIEAMELDLLSLDSVVRFSEAWNG--RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQV 178
           ++ A E  L  L   +R      G  RL    +LINNAG  ++G+  K   D  +     
Sbjct: 63  DLGA-EAGLEQLLKALRELPRPKGLQRL----LLINNAG--TLGDVSKGFVDLSDSTQVQ 115

Query: 179 NHLAPALLSILLFPSLI-------RGSPSRIINVNSV 208
           N+ A  L S+L   S +        G    ++N++S+
Sbjct: 116 NYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSL 152

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 24/155 (15%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG  SG+GR +  +    GA V +  R+ +   EL   + +          +  +E D
Sbjct: 8   LITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGD---------AVVGVEGD 58

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS-----IGEPQKFSKDGYEEHMQVN---- 179
           + SL    R       R G L   I NAGI+      +  P++   + ++E   +N    
Sbjct: 59  VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGY 118

Query: 180 -HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
              A A L     P+L     S I  V++   Y G
Sbjct: 119 ILGAKAAL-----PALYATEGSVIFTVSNAGFYPG 148

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 6e-06
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 9/141 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T  +TG++SG GR +  +L   G  V   VR   A ++L  ++ +          +  ++
Sbjct: 4   TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGD---------RLWVLQ 54

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+    +V    +     LG + V+++NAG    G  ++ S       +  N +    +
Sbjct: 55  LDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQV 114

Query: 187 SILLFPSLIRGSPSRIINVNS 207
                P L R    RI+ V+S
Sbjct: 115 IRAALPHLRRQGGGRIVQVSS 135

Length = 276

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 45/160 (28%), Positives = 63/160 (39%), Gaps = 27/160 (16%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK----AANELIQKWQEEWSGKGLPL 120
               ++TG  SGIGR +A   A  GA V +    L      A E  +K  EE   K L  
Sbjct: 26  GKKALITGGDSGIGRAVAIAFAREGADVAINY--LPEEEDDAEE-TKKLIEEEGRKCL-- 80

Query: 121 NIEAMELDLLSLD---SVVRFSEAWNGRLGPLHVLINNAG----IFSIGEPQKFSKDGYE 173
               +  DL        +V+         G L +L+NNA       SI +    + +  E
Sbjct: 81  ---LIPGDLGDESFCRDLVKEV---VKEFGKLDILVNNAAYQHPQESIED---ITTEQLE 131

Query: 174 EHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           +  + N  +   L+    P L +G  S IIN  SV  Y G
Sbjct: 132 KTFRTNIFSMFYLTKAALPHLKKG--SSIINTTSVTAYKG 169

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 14/115 (12%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +V G + GIG  I R+    GA+V       K A E +   QE  +         A++ D
Sbjct: 10  LVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA--QETGA--------TAVQTD 59

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
               D+V+        + G L +L+ NAGI   G+  +   D  +   ++N  AP
Sbjct: 60  SADRDAVIDVVR----KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAP 110

Length = 237

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 11/151 (7%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
              T ++TG+   IG  + + + E+G  V+ A  + +A NEL++   +E+  K     + 
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSK----KLS 58

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF---SKDGYEEHMQVNH 180
            +ELD+   +S+  F      + G +   +N A   +    +KF   S D + E++   H
Sbjct: 59  LVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLS-LH 117

Query: 181 LAPALLSILLFPS--LIRGSPSRIINVNSVM 209
           L  + L    F      +G  + ++N++S+ 
Sbjct: 118 LGSSFLFSQQFAKYFKKQGGGN-LVNISSIY 147

Length = 256

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLP 119
           P   D T ++TG   G+G  +AR LA  GA H+V+  R                   G  
Sbjct: 146 PGGLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRR--GPAPRAAARAALLRAGGAR 203

Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
             +  +  D+    ++           GPL  +I+ AG+
Sbjct: 204 --VSVVRCDVTDPAALAALLAEL-AAGGPLAGVIHAAGV 239

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG++SG+G  +AR+ A  G  + +  R      EL  +    + G    + +    LD
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPG----IKVAVAALD 61

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           +   D V      +   LG L  +I NAGI
Sbjct: 62  VNDHDQVFEVFAEFRDELGGLDRVIVNAGI 91

Length = 248

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 9/127 (7%)

Query: 39  YVIYEMLFQRILASHLQNPLPLPPVNDLTCI------VTGSTSGIGREIARQLAE-SGAH 91
            V Y     R + +    PLP                VTG   GIGR +AR LA   GA 
Sbjct: 174 EVRYRDG-LRYVQTLEPLPLPAGAAASAPLKPGGVYLVTGGAGGIGRALARALARRYGAR 232

Query: 92  VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHV 151
           +V+  R+     E   K Q   + + L   +  +  D+    +V R  E    R G +  
Sbjct: 233 LVLLGRS-PLPPEEEWKAQTLAALEALGARVLYISADVTDAAAVRRLLEKVRERYGAIDG 291

Query: 152 LINNAGI 158
           +I+ AG+
Sbjct: 292 VIHAAGV 298

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 11/156 (7%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE-WSGKGLPL 120
           P+ +   +VT ST GIG  IAR+LA+ GAHVV++ R  +  +  +   Q E  S  G   
Sbjct: 7   PLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVC 66

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVN 179
           ++   E          R         G + +L++NA +    G     +++ +++ + VN
Sbjct: 67  HVGKAE-------DRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVN 119

Query: 180 HLAPALLSILLFPSL-IRGSPSRIINVNSVMHYVGF 214
             A AL++  + P +  RG  S +I V+SV  +  F
Sbjct: 120 VKATALMTKAVVPEMEKRGGGSVVI-VSSVAAFHPF 154

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 19/98 (19%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMA----VRNLKAANELIQKWQEEWSGKGLPL 120
               ++TG  SGIG   AR+LA  GA VV+          AA+E               +
Sbjct: 7   GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADE---------------V 51

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
               +  D+   D+V    +      G + +  NNAGI
Sbjct: 52  GGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGI 89

Length = 255

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 24/148 (16%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRN----LKAANELIQKWQEEWSGKGLPLNIEA 124
           IVTG + G+G  +A QL + G  V+   R+    L AA              G  L    
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAA-------------AGERL--AE 49

Query: 125 MELDLLSLDSVVRFSEAWNGRLGP----LHVLINNAGIFS-IGEPQKFSKDGYEEHMQVN 179
           +ELDL    +   +                +LINNAG    IG             + +N
Sbjct: 50  VELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLN 109

Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNS 207
             AP +L+  L  +    +  RI++++S
Sbjct: 110 VAAPLMLTAALAQAASDAAERRILHISS 137

Length = 243

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   IVTG  SGIG  I+ +LAE GA  V+  R+    +E  ++ +       L    E 
Sbjct: 7   DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS-APDDEFAEELRA------LQPRAEF 59

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           +++DL          E    + G +  L+NNAG+
Sbjct: 60  VQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGV 93

Length = 258

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 15/154 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHV-VMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             IVTG++ GIGR IA +LA  G  + +  + +   A E++ +                 
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGR------RAIYF 56

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAP 183
           + D+  L       +      G L  L+NNAGI     G+    ++D ++  + +N   P
Sbjct: 57  QADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGP 116

Query: 184 ALLS------ILLFPSLIRGSPSRIINVNSVMHY 211
             L+      ++  P    G    II V S+  Y
Sbjct: 117 FFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAY 150

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 24/126 (19%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMA----VRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           I+TG  SGIG   AR  A+ GA VV+A          A EL               +I  
Sbjct: 8   IITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAEL------------GDPDISF 55

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-----FSIGEPQKFSKDGYEEHMQVN 179
           +  D+     V    +    R G L ++ NNAG+     +SI E    S + +E  + VN
Sbjct: 56  VHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILE---TSLEEFERVLDVN 112

Query: 180 HLAPAL 185
                L
Sbjct: 113 VYGAFL 118

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+T+G G  I R+  + G  V+   R      E +Q+ ++E     L  N+   +LD
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRR----QERLQELKDE-----LGDNLYIAQLD 54

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPALLS 187
           + +  ++     +       + VL+NNAG+    EP  K S + +E  +  N+     ++
Sbjct: 55  VRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMT 114

Query: 188 ILLFPSLIRGSPSRIINVNSV 208
             + P ++  +   IIN+ S 
Sbjct: 115 RAVLPGMVERNHGHIINIGST 135

Length = 248

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG +SGIG  I ++L  +GA+VV A  ++   +   +             N + + 
Sbjct: 11  IIIVTGGSSGIGLAIVKELLANGANVVNA--DIHGGDGQHE-------------NYQFVP 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
            D+ S + V         + G +  L+NNAGI
Sbjct: 56  TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGI 87

Length = 266

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 37/149 (24%), Positives = 51/149 (34%), Gaps = 29/149 (19%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           +TG+ SGIGRE A   A +G  V +   +                   L   + A  +  
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGL-------------AALAAELGAENVVA 51

Query: 130 LSLDSVVRFSEAWNGRL--------GPLHVLINNAGIFSIGEPQKFSKDGYEEH---MQV 178
            +LD  V    AW   L        G L  L NNAG+   G    F       H   + +
Sbjct: 52  GALD--VTDRAAWAAALADFAAATGGRLDALFNNAGVGRGG---PFEDVPLAAHDRMVDI 106

Query: 179 NHLAPALLSILLFPSLIRGSPSRIINVNS 207
           N       +    P L     +R+IN  S
Sbjct: 107 NVKGVLNGAYAALPYLKATPGARVINTAS 135

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187655 cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup 1, complex (x) SDRs

 Score = 42.9 bits (102), Expect = 9e-05
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGA-HVVMAVR 97
           T +VTG T  +G  +AR LA  GA H+V+  R
Sbjct: 232 TVLVTGGTGALGAHVARWLARRGAEHLVLTSR 263

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes KR domains found in many multidomain PKSs, including six of seven Sorangium cellulosum PKSs (encoded by spiDEFGHIJ) which participate in the synthesis of the polyketide scaffold of the cytotoxic spiroketal polyketide spirangien. These seven PKSs have either a single PKS module (SpiF), two PKR modules (SpiD,-E,-I,-J), or three PKS modules (SpiG,-H). This subfamily includes the single KR domain of SpiF, the first KR domains of SpiE,-G,H,-I,and #J, the third KR domain of SpiG, and the second KR domain of SpiH. The second KR domains of SpiE,-G, I, and #J, and the KR domains of SpiD, belong to a different KR_FAS_SDR subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 480

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWS--GKGLPLNI 122
           T +++G T GIG+ I  + A+SG ++      N++ AN++ +  ++++    K  PLNI
Sbjct: 10  TLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNI 68

Length = 260

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 11/92 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAM 125
           T +VTG + G+G  IAR  A  GA VV+     + AA  L      E   + + L     
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALAD----ELGDRAIAL----- 57

Query: 126 ELDLLSLDSVVRFSEAWNGRLG-PLHVLINNA 156
           + D+   + V           G P+  ++NNA
Sbjct: 58  QADVTDREQVQAMFATATEHFGKPITTVVNNA 89

Length = 253

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V G TSGI   IA+  A +GA+V +A R+ +  +  + + Q+    +GL      + 
Sbjct: 11  NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA-GPEGL-----GVS 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNA 156
            D+    +V           GP+ VL++ A
Sbjct: 65  ADVRDYAAVEAAFAQIADEFGPIDVLVSGA 94

Length = 264

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK 108
           VTG+T  +G  +   L    A VV  VRN + A      
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAAD 41

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 13/68 (19%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           VTG+T  +G  + R+L   G  V  AVRN +AA               L   +E +  DL
Sbjct: 5   VTGATGFVGGAVVRELLARGHEVRAAVRNPEAA-------------AALAGGVEVVLGDL 51

Query: 130 LSLDSVVR 137
               S+V 
Sbjct: 52  RDPKSLVA 59

Length = 275

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLP 119
             +     ++TG ++G+GR +A +  +  A VV+  R + + AN++ ++ ++  +G G  
Sbjct: 3   SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK--AG-GEA 59

Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           + ++    D+     VV   +      G L V+INNAGI
Sbjct: 60  IAVKG---DVTVESDVVNLIQTAVKEFGTLDVMINNAGI 95

Length = 261

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 18/144 (12%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           +  T +VTG+T GIG  ++ +LA  G  V+   R+            +++ G+    ++ 
Sbjct: 2   SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS----------AIDDFPGELFACDLA 51

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            +E    +L  +          + P+  ++NN GI       K      ++   +N  A 
Sbjct: 52  DIEQTAATLAQIN--------EIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAA 103

Query: 184 ALLSILLFPSLIRGSPSRIINVNS 207
             ++      +      RI+N+ S
Sbjct: 104 VQVTQAFLEGMKLREQGRIVNICS 127

Length = 234

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 51  ASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ 110
           AS   + LP   +     +VTG  +GIG  I R   + GA V +        ++L Q   
Sbjct: 4   ASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIV----DLQDDLGQNVC 59

Query: 111 EEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           +   G+    N+     D+   D V R  +    + G L +++NNAG+
Sbjct: 60  DSLGGEP---NVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGL 104

Length = 280

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 29/190 (15%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   ++TG  SG+G   A +LA+ GA + +         +L ++  E      L +  +A
Sbjct: 3   DKVVLITGGGSGLGLATAVRLAKEGAKLSLV--------DLNEEGLEAAKAALLEIAPDA 54

Query: 125 MEL----DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN 179
             L    D+     V  + +A   + G +    NNAGI       + F  D +++ + +N
Sbjct: 55  EVLLIKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSIN 114

Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
                          +RG    +  V  VM   G     +   V G R   +  GY+ +K
Sbjct: 115 ---------------LRGVFYGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAK 159

Query: 240 LAQVKLETKN 249
              V L T+N
Sbjct: 160 HGVVGL-TRN 168

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 22/156 (14%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAA-------NELIQKWQEE--- 112
            +    +VTG+  G+GR  A   AE GA VV  V +L          +    K  +E   
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKVV--VNDLGGDRKGSGKSSSAADKVVDEIKA 60

Query: 113 WSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGY 172
             GK +       + + +   ++  F        G + +L+NNAGI       K S++ +
Sbjct: 61  AGGKAVANYDSVEDGEKIVKTAIDAF--------GRVDILVNNAGILRDRSFAKMSEEDW 112

Query: 173 EEHMQVNHLAPA-LLSILLFPSLIRGSPSRIINVNS 207
           +  M+V HL  +  ++   +P + +    RIIN +S
Sbjct: 113 DLVMRV-HLKGSFKVTRAAWPYMRKQKFGRIINTSS 147

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 8/102 (7%)

Query: 58  LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKG 117
                ++    +VTG+ +G+GR  A  LA  GA VV+   N  A+        +E    G
Sbjct: 5   TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVV---NDVASALDASDVLDEIRAAG 61

Query: 118 LPLNIEAMEL-DLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
                 A ++    + D +V  +      LG L +++NNAGI
Sbjct: 62  AKAVAVAGDISQRATADELVATAVG----LGGLDIVVNNAGI 99

Length = 306

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 16/150 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + ++TG +SGIG   AR L   G  V    R      E +   + E         +EA +
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCRKE----EDVAALEAE--------GLEAFQ 53

Query: 127 LDLLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           LD    +S+            G L  L NN      G  +    +      + N      
Sbjct: 54  LDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHD 113

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFV 215
           L+  + P + +    RI+  +S++   G V
Sbjct: 114 LTRRVIPVMRKQGQGRIVQCSSIL---GLV 140

Length = 277

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 39.1 bits (92), Expect = 9e-04
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQ 107
           V G+T  +GR + R+L + G  V   VR+   A +L  
Sbjct: 4   VVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEA 41

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQ 107
             ++TG+TSGIG+++A   A+ G  V+   RN    +EL  
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT 43

Length = 240

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 11/127 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG  SGIG     + A  GA VV+   +     + +         +G   ++  +  D
Sbjct: 10  VITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV----NHLRAEG--FDVHGVMCD 63

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HLAP 183
           +   + V   ++     LG + V+ +NAGI   G   + + D +   + V+     H   
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123

Query: 184 ALLSILL 190
           A L  LL
Sbjct: 124 AFLPRLL 130

Length = 275

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 21/178 (11%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +V G    +G  +   LAE+G  V +A  N + A ++  +   E+  K           D
Sbjct: 6   VVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAY-----GFGAD 60

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
             +  SV+  S+  +     + +L+ +AGI    +   F    ++  +QVN +   L + 
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAR 120

Query: 189 LLFPSLIR-GSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
                +IR G   RII +NS    VG              K+ S  GYS +K   V L
Sbjct: 121 EFSKLMIRDGIQGRIIQINSKSGKVG-------------SKHNS--GYSAAKFGGVGL 163

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 5/139 (3%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           VTG   GIG  I ++L + G  VV              KW E+   K L  +  A E ++
Sbjct: 8   VTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRV---KWLED--QKALGFDFIASEGNV 62

Query: 130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSIL 189
              DS     +     +G + VL+NNAGI      +K +++ +   +  N  +   ++  
Sbjct: 63  GDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQ 122

Query: 190 LFPSLIRGSPSRIINVNSV 208
           +   ++     RIIN++SV
Sbjct: 123 VIDGMVERGWGRIINISSV 141

Length = 246

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE 111
           V G+T   GR + ++L   G  V    RN   A        +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPGVTPVQ 44

Length = 182

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 67  TCIVTGST-SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VT +  +GIG   AR+  E GA VV++  + +   E   +   E         +EA+
Sbjct: 19  VVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLG----RVEAV 74

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
             D+ S   V    +A   RLG L VL+NNAG+
Sbjct: 75  VCDVTSEAQVDALIDAAVERLGRLDVLVNNAGL 107

Length = 262

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 8/153 (5%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVM--AVRNLKAANELIQKWQEEWSG-----KGLPLNI 122
           +TG+  G GR  A +LA  GA ++       L          +E+        + L   +
Sbjct: 8   ITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALGRKV 67

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
            A + D+  L  V    E    + G L V++ NAG+ S G   + S++ ++  + +N   
Sbjct: 68  LARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLDINLTG 127

Query: 183 PALLSILLFPSLI-RGSPSRIINVNSVMHYVGF 214
                  + P +I RG+   II  +SV      
Sbjct: 128 VWRTCKAVVPHMIERGNGGSIIITSSVAGLKAL 160

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 24/158 (15%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
               ++TG  SGIGR +A   A+ GA + +   +        ++  E+   K L +  + 
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDV 105

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHM----QVN- 179
            +      D+V          LG L +L+NNA       PQ+  +D   E +    + N 
Sbjct: 106 SDEAFCK-DAVEETVRE----LGRLDILVNNAA---FQYPQQSLEDITAEQLDKTFKTNI 157

Query: 180 ----HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
               H+  A L     P L +GS   IIN  S+  Y G
Sbjct: 158 YSYFHMTKAAL-----PHLKQGSA--IINTGSITGYEG 188

Length = 290

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 27/107 (25%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG+  GIGR  A   A  GA VV  V ++    +          G     +     
Sbjct: 8   VVIVTGAGGGIGRAHALAFAAEGARVV--VNDIGVGLD----------GSASGGSAAQAV 55

Query: 127 LD---------LLSLDSVVRFSEAWN------GRLGPLHVLINNAGI 158
           +D         + + D +  +  A N         G L VL+NNAGI
Sbjct: 56  VDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGI 102

Length = 286

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	249
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07791	286	short chain dehydrogenase; Provisional	99.98
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.98
PRK07063	260	short chain dehydrogenase; Provisional	99.98
KOG0725	270	consensus Reductases with broad range of substrate	99.98
PRK05854	313	short chain dehydrogenase; Provisional	99.98
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.98
PLN02780	320	ketoreductase/ oxidoreductase	99.98
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.98
PRK08589	272	short chain dehydrogenase; Validated	99.98
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.98
PRK07478	254	short chain dehydrogenase; Provisional	99.97
PRK05872	296	short chain dehydrogenase; Provisional	99.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.97
PRK07109	334	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.97
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08303	305	short chain dehydrogenase; Provisional	99.97
PRK08862	227	short chain dehydrogenase; Provisional	99.97
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK05867	253	short chain dehydrogenase; Provisional	99.97
PRK06398	258	aldose dehydrogenase; Validated	99.97
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.97
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
KOG1208	314	consensus Dehydrogenases with different specificit	99.97
PRK06114	254	short chain dehydrogenase; Provisional	99.97
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07825	273	short chain dehydrogenase; Provisional	99.97
PRK06194	287	hypothetical protein; Provisional	99.97
PRK08265	261	short chain dehydrogenase; Provisional	99.97
PRK05599	246	hypothetical protein; Provisional	99.97
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.97
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PLN02253	280	xanthoxin dehydrogenase	99.97
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.97
PRK09242	257	tropinone reductase; Provisional	99.97
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.97
PRK07677	252	short chain dehydrogenase; Provisional	99.97
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.97
PRK05866	293	short chain dehydrogenase; Provisional	99.97
PRK05717	255	oxidoreductase; Validated	99.97
PRK07035	252	short chain dehydrogenase; Provisional	99.97
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.97
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07024	257	short chain dehydrogenase; Provisional	99.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12747	252	short chain dehydrogenase; Provisional	99.97
PRK07831	262	short chain dehydrogenase; Provisional	99.97
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.97
PRK06172	253	short chain dehydrogenase; Provisional	99.97
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06197	306	short chain dehydrogenase; Provisional	99.96
PRK05993	277	short chain dehydrogenase; Provisional	99.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.96
PRK06182	273	short chain dehydrogenase; Validated	99.96
PRK05855	582	short chain dehydrogenase; Validated	99.96
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.96
PRK07814	263	short chain dehydrogenase; Provisional	99.96
PRK07576	264	short chain dehydrogenase; Provisional	99.96
PRK06483	236	dihydromonapterin reductase; Provisional	99.96
PRK08643	256	acetoin reductase; Validated	99.96
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.96
PRK08278	273	short chain dehydrogenase; Provisional	99.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.96
PRK06128	300	oxidoreductase; Provisional	99.96
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.96
PRK07067	257	sorbitol dehydrogenase; Provisional	99.96
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.96
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.96
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06179	270	short chain dehydrogenase; Provisional	99.96
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.96
PRK07985	294	oxidoreductase; Provisional	99.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.96
PRK05650	270	short chain dehydrogenase; Provisional	99.96
PRK06180	277	short chain dehydrogenase; Provisional	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PRK06125	259	short chain dehydrogenase; Provisional	99.96
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.96
PRK06196	315	oxidoreductase; Provisional	99.96
PRK08263	275	short chain dehydrogenase; Provisional	99.96
PRK06841	255	short chain dehydrogenase; Provisional	99.96
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.96
PRK08251	248	short chain dehydrogenase; Provisional	99.96
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.96
PRK07890	258	short chain dehydrogenase; Provisional	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PRK07856	252	short chain dehydrogenase; Provisional	99.96
PRK07904	253	short chain dehydrogenase; Provisional	99.96
PRK06138	252	short chain dehydrogenase; Provisional	99.96
PRK06523	260	short chain dehydrogenase; Provisional	99.96
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.96
PRK12743	256	oxidoreductase; Provisional	99.96
PRK12939	250	short chain dehydrogenase; Provisional	99.96
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.96
PRK09186	256	flagellin modification protein A; Provisional	99.96
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08267	260	short chain dehydrogenase; Provisional	99.96
PRK08226	263	short chain dehydrogenase; Provisional	99.96
PRK07454	241	short chain dehydrogenase; Provisional	99.96
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PRK09134	258	short chain dehydrogenase; Provisional	99.96
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK07774	250	short chain dehydrogenase; Provisional	99.96
PRK07775	274	short chain dehydrogenase; Provisional	99.96
PRK08628	258	short chain dehydrogenase; Provisional	99.96
PRK06500	249	short chain dehydrogenase; Provisional	99.96
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.96
PRK08703	239	short chain dehydrogenase; Provisional	99.96
PRK07832	272	short chain dehydrogenase; Provisional	99.96
PRK09072	263	short chain dehydrogenase; Provisional	99.96
PRK06482	276	short chain dehydrogenase; Provisional	99.96
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.95
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.95
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK06914	280	short chain dehydrogenase; Provisional	99.95
PLN00015	308	protochlorophyllide reductase	99.95
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.95
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.95
PRK06949	258	short chain dehydrogenase; Provisional	99.95
PRK05693	274	short chain dehydrogenase; Provisional	99.95
PRK06057	255	short chain dehydrogenase; Provisional	99.95
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.95
PRK07069	251	short chain dehydrogenase; Validated	99.95
PRK10538	248	malonic semialdehyde reductase; Provisional	99.95
PRK06198	260	short chain dehydrogenase; Provisional	99.95
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12937	245	short chain dehydrogenase; Provisional	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PRK12744	257	short chain dehydrogenase; Provisional	99.95
PRK06701	290	short chain dehydrogenase; Provisional	99.95
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.95
PRK05875	276	short chain dehydrogenase; Provisional	99.95
COG1028	251	FabG Dehydrogenases with different specificities (	99.95
PRK12746	254	short chain dehydrogenase; Provisional	99.95
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.95
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.95
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.95
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.95
PRK07102	243	short chain dehydrogenase; Provisional	99.95
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.95
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.95
PRK06123	248	short chain dehydrogenase; Provisional	99.95
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.95
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.95
PRK12827	249	short chain dehydrogenase; Provisional	99.94
PRK06181	263	short chain dehydrogenase; Provisional	99.94
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.94
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK07326	237	short chain dehydrogenase; Provisional	99.94
PRK12828	239	short chain dehydrogenase; Provisional	99.94
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.94
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06940	275	short chain dehydrogenase; Provisional	99.94
PRK07074	257	short chain dehydrogenase; Provisional	99.94
PRK06101	240	short chain dehydrogenase; Provisional	99.94
PRK12742	237	oxidoreductase; Provisional	99.94
PRK05884	223	short chain dehydrogenase; Provisional	99.94
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.94
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.94
PRK09291	257	short chain dehydrogenase; Provisional	99.94
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK12829	264	short chain dehydrogenase; Provisional	99.94
PRK06924	251	short chain dehydrogenase; Provisional	99.93
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.93
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK09135	249	pteridine reductase; Provisional	99.93
PRK08324	681	short chain dehydrogenase; Validated	99.93
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK07060	245	short chain dehydrogenase; Provisional	99.93
PRK07023	243	short chain dehydrogenase; Provisional	99.93
PRK12367	245	short chain dehydrogenase; Provisional	99.93
PRK07577	234	short chain dehydrogenase; Provisional	99.93
PRK08264	238	short chain dehydrogenase; Validated	99.92
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.92
PRK07578	199	short chain dehydrogenase; Provisional	99.92
PRK08017	256	oxidoreductase; Provisional	99.92
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.92
PRK07041	230	short chain dehydrogenase; Provisional	99.92
PRK08177	225	short chain dehydrogenase; Provisional	99.92
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.92
PRK07806	248	short chain dehydrogenase; Provisional	99.91
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.91
PRK06953	222	short chain dehydrogenase; Provisional	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
PRK08219	227	short chain dehydrogenase; Provisional	99.89
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.89
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.88
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.87
PRK06720	169	hypothetical protein; Provisional	99.86
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.85
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.84
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.8
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.79
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.79
PLN02653	340	GDP-mannose 4,6-dehydratase	99.78
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.76
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.74
PLN02240	352	UDP-glucose 4-epimerase	99.73
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.72
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.72
PLN03209	576	translocon at the inner envelope of chloroplast su	99.71
PLN02214	342	cinnamoyl-CoA reductase	99.71
PLN02572	442	UDP-sulfoquinovose synthase	99.71
PLN00198	338	anthocyanidin reductase; Provisional	99.71
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.71
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.68
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.68
PLN02583	297	cinnamoyl-CoA reductase	99.68
PLN02650	351	dihydroflavonol-4-reductase	99.66
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.65
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.65
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.64
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.64
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.64
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.64
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.63
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.63
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.62
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.62
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.6
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.57
PLN02686	367	cinnamoyl-CoA reductase	99.54
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.51
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.49
PLN02427	386	UDP-apiose/xylose synthase	99.49
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.48
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.48
PLN02260	668	probable rhamnose biosynthetic enzyme	99.47
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.46
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.46
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.46
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.46
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.45
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.45
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.44
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.43
PLN02206	442	UDP-glucuronate decarboxylase	99.39
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.39
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.35
CHL00194	317	ycf39 Ycf39; Provisional	99.33
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.32
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.32
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.31
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.31
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.29
PLN02778	298	3,5-epimerase/4-reductase	99.28
PLN02996	491	fatty acyl-CoA reductase	99.28
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.27
PRK07201	657	short chain dehydrogenase; Provisional	99.24
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.24
PRK08309	177	short chain dehydrogenase; Provisional	99.14
PRK05865	854	hypothetical protein; Provisional	99.12
PLN02260	668	probable rhamnose biosynthetic enzyme	99.07
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.05
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.02
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.98
PLN02503	605	fatty acyl-CoA reductase 2	98.94
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.93
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.92
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.88
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.84
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.83
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.82
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.81
PRK12320	699	hypothetical protein; Provisional	98.8
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.78
PLN00016	378	RNA-binding protein; Provisional	98.77
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.71
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.7
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.7
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.66
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.6
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.43
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.34
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.31
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.3
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.3
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.22
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.22
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.21
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.2
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.16
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.1
PRK09620	229	hypothetical protein; Provisional	98.09
COG2910	211	Putative NADH-flavin reductase [General function p	98.0
PRK14982	340	acyl-ACP reductase; Provisional	97.95
PTZ00325	321	malate dehydrogenase; Provisional	97.89
PLN00106	323	malate dehydrogenase	97.89
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.88
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.86
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.79
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.78
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.75
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.74
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.74
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.68
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.67
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.66
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.63
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.57
KOG2774	366	consensus NAD dependent epimerase [General functio	97.5
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.45
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.44
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.44
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.42
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.4
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.36
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.35
PRK06849	389	hypothetical protein; Provisional	97.34
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.32
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.31
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.3
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.25
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.24
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.23
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.22
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.21
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.2
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.18
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.18
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.17
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.16
PRK05086	312	malate dehydrogenase; Provisional	97.16
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.14
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.13
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.08
COG3268	382	Uncharacterized conserved protein [Function unknow	97.07
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.05
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.03
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.03
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.02
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.98
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.95
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.92
PRK14968	188	putative methyltransferase; Provisional	96.9
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.88
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.8
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.8
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.8
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.77
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.76
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.76
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.75
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.74
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.72
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.71
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.68
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.67
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.67
PRK04148	134	hypothetical protein; Provisional	96.67
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.67
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.66
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.66
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.65
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.65
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.62
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	96.62
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.61
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.59
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.55
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.55
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.55
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.54
PRK09496	453	trkA potassium transporter peripheral membrane com	96.51
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.5
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.5
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.49
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.46
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.45
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.44
PLN00203	519	glutamyl-tRNA reductase	96.41
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.4
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.38
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.3
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.3
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.29
PRK08223	287	hypothetical protein; Validated	96.25
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.23
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.23
PTZ00117	319	malate dehydrogenase; Provisional	96.22
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.21
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.18
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.14
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.13
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.13
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.12
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.11
PRK05442	326	malate dehydrogenase; Provisional	96.1
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.1
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.09
PLN02602	350	lactate dehydrogenase	96.08
PRK08328	231	hypothetical protein; Provisional	96.08
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.08
PRK09496	453	trkA potassium transporter peripheral membrane com	96.07
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.05
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.05
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.04
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.01
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.99
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.98
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.96
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.96
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.94
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.92
PLN02740	381	Alcohol dehydrogenase-like	95.92
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.91
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.9
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.9
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.88
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.88
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.86
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.85
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.85
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.84
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.82
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.81
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.81
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.8
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.8
PRK14851	679	hypothetical protein; Provisional	95.78
PRK12480	330	D-lactate dehydrogenase; Provisional	95.78
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.75
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.74
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.73
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.7
PRK06223	307	malate dehydrogenase; Reviewed	95.7
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.68
PTZ00354	334	alcohol dehydrogenase; Provisional	95.68
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.67
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.65
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.62
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.6
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.57
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.57
PRK10669	558	putative cation:proton antiport protein; Provision	95.53
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.53
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.51
PRK08655	437	prephenate dehydrogenase; Provisional	95.49
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.47
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.45
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.45
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.44
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.4
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.36
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.35
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.32
PRK07877	722	hypothetical protein; Provisional	95.3
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.28
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.27
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.25
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.23
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.22
PRK13243	333	glyoxylate reductase; Reviewed	95.21
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.19
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.19
PLN02827	378	Alcohol dehydrogenase-like	95.17
PRK14852	989	hypothetical protein; Provisional	95.16
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.15
PRK07411	390	hypothetical protein; Validated	95.15
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.14
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.14
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.11
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.1
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.09
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.09
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.07
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.06
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.06
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.03
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	95.03
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.01
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	94.96
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.96

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-39  Score=269.92  Aligned_cols=171  Identities=25%  Similarity=0.396  Sum_probs=162.8

Q ss_pred             CCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           56 NPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        56 ~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .+.+..+..|++||||||++|+|+++|.+|+++|+.++++|.+.+..+++.+++++.       ++++.+.||+++.+++
T Consensus        29 l~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-------g~~~~y~cdis~~eei  101 (300)
T KOG1201|consen   29 LPKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-------GEAKAYTCDISDREEI  101 (300)
T ss_pred             cccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-------CceeEEEecCCCHHHH
Confidence            355788999999999999999999999999999999999999999999999998874       2789999999999999


Q ss_pred             HHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      .+..++++++.|++|+||||||+....++.+.+.|++++++++|+.|+|..+|+++|.|.+++.|+||+|+|++|+.+. 
T Consensus       102 ~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~-  180 (300)
T KOG1201|consen  102 YRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP-  180 (300)
T ss_pred             HHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC-
Confidence            9999999999999999999999999889999999999999999999999999999999999999999999999999999 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+.+|.+.
T Consensus       181 --------------~gl~~YcaSK~a~vGfhes  199 (300)
T KOG1201|consen  181 --------------AGLADYCASKFAAVGFHES  199 (300)
T ss_pred             --------------ccchhhhhhHHHHHHHHHH
Confidence                          9999999999999999763

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.1e-40  Score=275.79  Aligned_cols=171  Identities=25%  Similarity=0.331  Sum_probs=159.8

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ..+.++.||+|+|||||+|||+++|++|+++|++++++.|+.++++.+.+++++..+..    ++++++||++|.+++++
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~----~v~~~~~Dvs~~~~~~~   80 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE----KVLVLQLDVSDEESVKK   80 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC----ccEEEeCccCCHHHHHH
Confidence            34567899999999999999999999999999999999999999999999999876542    69999999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++++...+|++|+||||||+.......+.+.++++.+|++|++|++.++|+++|+|++++.|+||++||++|..+.   
T Consensus        81 ~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~---  157 (282)
T KOG1205|consen   81 FVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL---  157 (282)
T ss_pred             HHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC---
Confidence            99999999999999999999998667788899999999999999999999999999999989999999999999998   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhh
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                                  |..+.|+|||+|+.+|..
T Consensus       158 ------------P~~~~Y~ASK~Al~~f~e  175 (282)
T KOG1205|consen  158 ------------PFRSIYSASKHALEGFFE  175 (282)
T ss_pred             ------------CcccccchHHHHHHHHHH
Confidence                        888899999999999974

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.2e-39  Score=261.97  Aligned_cols=164  Identities=24%  Similarity=0.321  Sum_probs=154.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+++|+++|||||||||.++|++|++.|++|++++|+.+++++.++++.+        .++.....|++|.++++.+++
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--------~~~~~~~~DVtD~~~~~~~i~   73 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--------GAALALALDVTDRAAVEAAIE   73 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--------CceEEEeeccCCHHHHHHHHH
Confidence            346779999999999999999999999999999999999999999888764        368899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      .+.++|+++|+||||||.....++.+.+.++|++++++|+.|.++.+++++|.|.+++.|+|||+||++|..+.      
T Consensus        74 ~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y------  147 (246)
T COG4221          74 ALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY------  147 (246)
T ss_pred             HHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC------
Confidence            99999999999999999987789999999999999999999999999999999999999999999999999887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhh
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                               |+.+.|++||+|+.+|++
T Consensus       148 ---------~~~~vY~ATK~aV~~fs~  165 (246)
T COG4221         148 ---------PGGAVYGATKAAVRAFSL  165 (246)
T ss_pred             ---------CCCccchhhHHHHHHHHH
Confidence                     999999999999999975

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.1e-38  Score=262.92  Aligned_cols=166  Identities=28%  Similarity=0.466  Sum_probs=158.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ...+++++|||||+|||+++|++|+++|++|++++|+.+++++..+++.++..     .++.++.+|+++++++.++.++
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~-----v~v~vi~~DLs~~~~~~~l~~~   77 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG-----VEVEVIPADLSDPEALERLEDE   77 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC-----ceEEEEECcCCChhHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999998652     5789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+..++||+||||||+...+++.+.+.++.++++++|+.+...++++++|.|.+++.|+||||+|.+|+.+.       
T Consensus        78 l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~-------  150 (265)
T COG0300          78 LKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT-------  150 (265)
T ss_pred             HHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-------
Confidence            9998889999999999999999999999999999999999999999999999999999999999999999998       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhh
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                              |..+.|+|||+++.+|++
T Consensus       151 --------p~~avY~ATKa~v~~fSe  168 (265)
T COG0300         151 --------PYMAVYSATKAFVLSFSE  168 (265)
T ss_pred             --------cchHHHHHHHHHHHHHHH
Confidence                    999999999999999986

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=231.43  Aligned_cols=166  Identities=20%  Similarity=0.245  Sum_probs=150.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..     +.++.++.+|++|++++++++++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~   79 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-----NVDVSYIVADLTKREDLERTVKE   79 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-----CCceEEEEecCCCHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988888877776532     13688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +. .+|++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.       
T Consensus        80 ~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~-------  151 (263)
T PRK08339         80 LK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI-------  151 (263)
T ss_pred             HH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC-------
Confidence            86 5899999999999877777888999999999999999999999999999998888999999999887776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              +....|+++|+|+.+|+|.
T Consensus       152 --------~~~~~y~asKaal~~l~~~  170 (263)
T PRK08339        152 --------PNIALSNVVRISMAGLVRT  170 (263)
T ss_pred             --------CcchhhHHHHHHHHHHHHH
Confidence                    7888999999999999874

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=1.4e-32  Score=228.84  Aligned_cols=169  Identities=25%  Similarity=0.370  Sum_probs=147.6

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      |....+-.|+|++||||++|||++.|++||++|.+|++++|++++++.+++|+.++++     .+++++.+|+++.+.+.
T Consensus        41 ~~~~~~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-----vev~~i~~Dft~~~~~y  115 (312)
T KOG1014|consen   41 PKDLKEKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-----VEVRIIAIDFTKGDEVY  115 (312)
T ss_pred             ecchHHhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-----cEEEEEEEecCCCchhH
Confidence            3334444569999999999999999999999999999999999999999999999765     47999999999988743


Q ss_pred             H-HHHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          137 R-FSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       137 ~-~~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      + +.+.+.+  .+|.+||||+|+..  +..+.+.+.+.++..+++|..+++.+++.++|.|.++++|.|||+||.++..+
T Consensus       116 e~i~~~l~~--~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p  193 (312)
T KOG1014|consen  116 EKLLEKLAG--LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP  193 (312)
T ss_pred             HHHHHHhcC--CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc
Confidence            3 3333322  36889999999986  55567778889999999999999999999999999999999999999999999


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhh
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      .               |.++.|++||++++.|++
T Consensus       194 ~---------------p~~s~ysasK~~v~~~S~  212 (312)
T KOG1014|consen  194 T---------------PLLSVYSASKAFVDFFSR  212 (312)
T ss_pred             C---------------hhHHHHHHHHHHHHHHHH
Confidence            8               999999999999999876

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-32  Score=236.25  Aligned_cols=167  Identities=21%  Similarity=0.293  Sum_probs=153.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.      +.++.++.+|++|.++++++++
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~------g~~~~~~~~Dv~d~~~v~~~~~   76 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL------GAEVLVVPTDVTDADQVKALAT   76 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHHH
Confidence            3567899999999999999999999999999999999999998888877652      2467888999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.+|++|++|||||+...+++.+.+.+++++++++|+.+++.+++.++|+|++++.|+||++||..++.+.      
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~------  150 (330)
T PRK06139         77 QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ------  150 (330)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC------
Confidence            99998899999999999988888899999999999999999999999999999999888999999999988877      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               |....|++||+|+.+|++.
T Consensus       151 ---------p~~~~Y~asKaal~~~~~s  169 (330)
T PRK06139        151 ---------PYAAAYSASKFGLRGFSEA  169 (330)
T ss_pred             ---------CCchhHHHHHHHHHHHHHH
Confidence                     8889999999999999874

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=228.42  Aligned_cols=167  Identities=20%  Similarity=0.282  Sum_probs=151.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...      +.++.++.+|++|.++++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~   75 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE------GFDVHGVMCDVRHREEVTHLAD   75 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEeCCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888777766542      2467889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.+|++|++|||||+...+++.+.+.+++++++++|+.+++.++++++|.|.+++ +|+||++||.+++.+.     
T Consensus        76 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-----  150 (275)
T PRK05876         76 EAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-----  150 (275)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-----
Confidence            9999999999999999998778888999999999999999999999999999998765 6899999999998877     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+.+|++.
T Consensus       151 ----------~~~~~Y~asK~a~~~~~~~  169 (275)
T PRK05876        151 ----------AGLGAYGVAKYGVVGLAET  169 (275)
T ss_pred             ----------CCCchHHHHHHHHHHHHHH
Confidence                      8889999999999998864

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.6e-32  Score=213.09  Aligned_cols=161  Identities=31%  Similarity=0.357  Sum_probs=144.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+.|-++|||||++|||+++|++|.+.|-.|++++|++++++++.++.          ..+....||+.|.++.++++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----------p~~~t~v~Dv~d~~~~~~lvew   71 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----------PEIHTEVCDVADRDSRRELVEW   71 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----------cchheeeecccchhhHHHHHHH
Confidence            357899999999999999999999999999999999999888776553          3578889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCC--CCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQ--KFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.|+.+|++|||||+.....+.  +-..+..++.+++|+.+++.+++.++|+++++..+.||||||..++.+.     
T Consensus        72 Lkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm-----  146 (245)
T COG3967          72 LKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM-----  146 (245)
T ss_pred             HHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc-----
Confidence            999999999999999997654443  3355778899999999999999999999999988999999999999998     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhh
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                                ...+.||++|||+..++.
T Consensus       147 ----------~~~PvYcaTKAaiHsyt~  164 (245)
T COG3967         147 ----------ASTPVYCATKAAIHSYTL  164 (245)
T ss_pred             ----------cccccchhhHHHHHHHHH
Confidence                      888899999999998875

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=225.55  Aligned_cols=169  Identities=22%  Similarity=0.334  Sum_probs=153.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.    .++..+.+|++|.++++++++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~   79 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG----ARLLAARCDVLDEADVAAFAA   79 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCC----ceEEEEEecCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888888777664322    368889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.      
T Consensus        80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  153 (265)
T PRK07062         80 AVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE------  153 (265)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC------
Confidence            99999999999999999877778888999999999999999999999999999998878999999999988776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|+++|+|+.+|+|.
T Consensus       154 ---------~~~~~y~asKaal~~~~~~  172 (265)
T PRK07062        154 ---------PHMVATSAARAGLLNLVKS  172 (265)
T ss_pred             ---------CCchHhHHHHHHHHHHHHH
Confidence                     7888999999999999874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-31  Score=225.32  Aligned_cols=160  Identities=17%  Similarity=0.169  Sum_probs=139.7

Q ss_pred             CCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+ ++.++..+++..        .++.++++|++|+++++++++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~~--------~~~~~~~~Dl~~~~~v~~~~~   75 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLVD--------EEDLLVECDVASDESIERAFA   75 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhcc--------CceeEEeCCCCCHHHHHHHHH
Confidence            678999999999  899999999999999999999998 344444333321        257889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++.+++|++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|+|.+  +|+||++||..+..+.  
T Consensus        76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~--  151 (252)
T PRK06079         76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAI--  151 (252)
T ss_pred             HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccC--
Confidence            999999999999999998643    56778899999999999999999999999999964  4899999999887776  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   +.+..|++||+|+++|+|.
T Consensus       152 -------------~~~~~Y~asKaal~~l~~~  170 (252)
T PRK06079        152 -------------PNYNVMGIAKAALESSVRY  170 (252)
T ss_pred             -------------CcchhhHHHHHHHHHHHHH
Confidence                         7888999999999999974

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.7e-31  Score=226.99  Aligned_cols=166  Identities=25%  Similarity=0.242  Sum_probs=147.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh---------HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL---------KAANELIQKWQEEWSGKGLPLNIEAMELDLLSL  132 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  132 (249)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.         +.+++..+++.+.      +.++.++.+|++|.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~Dv~~~   76 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA------GGEAVANGDDIADW   76 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc------CCceEEEeCCCCCH
Confidence            46789999999999999999999999999999998876         6666666666541      24678899999999


Q ss_pred             HHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC------CCeEEEEc
Q 025705          133 DSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS------PSRIINVN  206 (249)
Q Consensus       133 ~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~------~g~Iv~vs  206 (249)
                      ++++++++++.+.+|++|++|||||+....++.+.+.++|++++++|+.+++.++++++|+|+++.      .|+||++|
T Consensus        77 ~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~is  156 (286)
T PRK07791         77 DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTS  156 (286)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeC
Confidence            999999999999999999999999987777788899999999999999999999999999997642      37999999


Q ss_pred             CCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          207 SVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       207 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      |.++..+.               ++...|++||+|+++|+|.
T Consensus       157 S~~~~~~~---------------~~~~~Y~asKaal~~l~~~  183 (286)
T PRK07791        157 SGAGLQGS---------------VGQGNYSAAKAGIAALTLV  183 (286)
T ss_pred             chhhCcCC---------------CCchhhHHHHHHHHHHHHH
Confidence            99998887               8889999999999999874

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=2.9e-31  Score=225.45  Aligned_cols=163  Identities=15%  Similarity=0.169  Sum_probs=139.5

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+.+ +++..+++.++..     .+ ..+.+|++|.+++++++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-----~~-~~~~~Dv~d~~~v~~~~   74 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-----SD-YVYELDVSKPEHFKSLA   74 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-----Cc-eEEEecCCCHHHHHHHH
Confidence            3578999999997  89999999999999999999999853 3344445444321     13 56889999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+++|++|+||||||+...    .++.+.+.++|++++++|+.++++++++++|+|.+  +|+||++||.++..+. 
T Consensus        75 ~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~-  151 (274)
T PRK08415         75 ESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYV-  151 (274)
T ss_pred             HHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCC-
Confidence            9999999999999999998542    56778899999999999999999999999999975  3899999999887666 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    +.+..|++||+|+.+|+|.
T Consensus       152 --------------~~~~~Y~asKaal~~l~~~  170 (274)
T PRK08415        152 --------------PHYNVMGVAKAALESSVRY  170 (274)
T ss_pred             --------------CcchhhhhHHHHHHHHHHH
Confidence                          7788999999999999974

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.4e-31  Score=222.96  Aligned_cols=168  Identities=23%  Similarity=0.314  Sum_probs=151.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..    ...++.++.+|++|++++++++++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~   79 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV----AGARVLAVPADVTDAASVAAAVAA   79 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc----CCceEEEEEccCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988888877776421    124688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.       
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  152 (260)
T PRK07063         80 AEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-------  152 (260)
T ss_pred             HHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-------
Confidence            9999999999999999876666778889999999999999999999999999998878999999999888776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+.+|+|.
T Consensus       153 --------~~~~~Y~~sKaa~~~~~~~  171 (260)
T PRK07063        153 --------PGCFPYPVAKHGLLGLTRA  171 (260)
T ss_pred             --------CCchHHHHHHHHHHHHHHH
Confidence                    7888999999999999874

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.98  E-value=4.8e-31  Score=222.66  Aligned_cols=171  Identities=25%  Similarity=0.268  Sum_probs=151.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +..+.||+++|||+++|||+++|++|++.|++|++++|+.+.+++...++......   ..++..+.||+++.+++++++
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~l~   79 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYT---GGKVLAIVCDVSKEVDVEKLV   79 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC---CCeeEEEECcCCCHHHHHHHH
Confidence            45789999999999999999999999999999999999999999998887764332   357999999999999999999


Q ss_pred             HHHhcc-CCCccEEEeccccCCCC-CCCCCCHHHHHHHHHhhhh-HHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          140 EAWNGR-LGPLHVLINNAGIFSIG-EPQKFSKDGYEEHMQVNHL-APALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       140 ~~~~~~-~g~id~linnag~~~~~-~~~~~~~~~~~~~~~vN~~-~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++..++ +|++|+||||||..... +..+.++|+|++++++|+. +.+.+.+.+.++++++++|.|+++||..+..+.  
T Consensus        80 ~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~--  157 (270)
T KOG0725|consen   80 EFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG--  157 (270)
T ss_pred             HHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC--
Confidence            999998 79999999999987655 6899999999999999999 577777888888888788999999999988775  


Q ss_pred             ccccccccccccCCCc-ccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSL-MGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~-~~Y~asKaal~~l~~~  248 (249)
                                   ++. ..|++||+|+++|+|.
T Consensus       158 -------------~~~~~~Y~~sK~al~~ltr~  177 (270)
T KOG0725|consen  158 -------------PGSGVAYGVSKAALLQLTRS  177 (270)
T ss_pred             -------------CCCcccchhHHHHHHHHHHH
Confidence                         344 8999999999999984

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.4e-31  Score=229.08  Aligned_cols=183  Identities=30%  Similarity=0.486  Sum_probs=156.1

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +...++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.    .++.++.+|++|.++++
T Consensus         6 ~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~----~~v~~~~~Dl~d~~sv~   81 (313)
T PRK05854          6 DITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPD----AKLSLRALDLSSLASVA   81 (313)
T ss_pred             cccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC----CceEEEEecCCCHHHHH
Confidence            34567889999999999999999999999999999999999999988888888764322    36889999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++++.+.++++|+||||||+... +..+.+.++++.++++|+.+++.+++.++|.|.+. .|+||++||.++..+...
T Consensus        82 ~~~~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~  159 (313)
T PRK05854         82 ALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAIN  159 (313)
T ss_pred             HHHHHHHHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcC
Confidence            9999999999999999999998643 34457889999999999999999999999999865 589999999988776554


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .++++.   ..++++...|+.||+|+.+|+++
T Consensus       160 ~~~~~~---~~~~~~~~~Y~~SK~a~~~~~~~  188 (313)
T PRK05854        160 WDDLNW---ERSYAGMRAYSQSKIAVGLFALE  188 (313)
T ss_pred             cccccc---cccCcchhhhHHHHHHHHHHHHH
Confidence            444432   23457778999999999999864

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.98  E-value=3.3e-31  Score=222.22  Aligned_cols=164  Identities=23%  Similarity=0.356  Sum_probs=143.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+..  ++..+++.+      .+.++.++.+|+++++++++++++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA------LGRKFHFITADLIQQKDIDSIVSQ   76 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH------cCCeEEEEEeCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999988642  233333332      124688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.+|++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++ +|+||++||..++.+.      
T Consensus        77 ~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------  150 (251)
T PRK12481         77 AVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG------  150 (251)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC------
Confidence            999999999999999988777788899999999999999999999999999998764 5899999999988876      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|++||+|+++|+|.
T Consensus       151 ---------~~~~~Y~asK~a~~~l~~~  169 (251)
T PRK12481        151 ---------IRVPSYTASKSAVMGLTRA  169 (251)
T ss_pred             ---------CCCcchHHHHHHHHHHHHH
Confidence                     6778999999999999874

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.98  E-value=7.7e-31  Score=227.41  Aligned_cols=165  Identities=24%  Similarity=0.293  Sum_probs=137.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC--HHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS--LDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~v~~~~~  140 (249)
                      ..|++++||||++|||+++|++|+++|++|++++|+++++++..+++.+..+.    .++..+.+|+++  .+.++++.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~----~~~~~~~~Dl~~~~~~~~~~l~~  126 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSK----TQIKTVVVDFSGDIDEGVKRIKE  126 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC----cEEEEEEEECCCCcHHHHHHHHH
Confidence            46899999999999999999999999999999999999999988888764321    367888999985  334444444


Q ss_pred             HHhccCCCccEEEeccccCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc-C-CCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSI--GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV-G-FVD  216 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~-~-~~~  216 (249)
                      .+..  .++|++|||||+...  .++.+.+.+++++++++|+.+++.++++++|.|++++.|+||++||.++.. + .  
T Consensus       127 ~~~~--~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~--  202 (320)
T PLN02780        127 TIEG--LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSD--  202 (320)
T ss_pred             HhcC--CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC--
Confidence            3321  257799999998643  457788999999999999999999999999999998889999999998864 2 3  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   |..+.|++||+|+++|++.
T Consensus       203 -------------p~~~~Y~aSKaal~~~~~~  221 (320)
T PLN02780        203 -------------PLYAVYAATKAYIDQFSRC  221 (320)
T ss_pred             -------------ccchHHHHHHHHHHHHHHH
Confidence                         6788999999999999874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=3.2e-31  Score=224.82  Aligned_cols=162  Identities=14%  Similarity=0.145  Sum_probs=138.6

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++|++|||||++  |||+++|++|+++|++|++++|+....+ ..+++.+..   +   ....+++|++|.++++++++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~~---g---~~~~~~~Dv~d~~~v~~~~~   77 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RVKPLAESL---G---SDFVLPCDVEDIASVDAVFE   77 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HHHHHHHhc---C---CceEEeCCCCCHHHHHHHHH
Confidence            5789999999996  9999999999999999999999854333 234443321   1   23568899999999999999


Q ss_pred             HHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++.+.+|++|+||||||+...    .++.+.+.++|++++++|+.+++.++|+++|+|.+  +|+||++||.++..+.  
T Consensus        78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~--  153 (271)
T PRK06505         78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVM--  153 (271)
T ss_pred             HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccC--
Confidence            999999999999999998643    45678899999999999999999999999999974  4899999999887766  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   |.+..|++||+|+.+|+|.
T Consensus       154 -------------~~~~~Y~asKaAl~~l~r~  172 (271)
T PRK06505        154 -------------PNYNVMGVAKAALEASVRY  172 (271)
T ss_pred             -------------CccchhhhhHHHHHHHHHH
Confidence                         7888999999999999974

>PRK08589 short chain dehydrogenase; Validated

Probab=99.98  E-value=6.1e-31  Score=223.12  Aligned_cols=164  Identities=24%  Similarity=0.379  Sum_probs=147.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+ +++++..+++.+.      +.++..+.+|+++.+++++++++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~   75 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN------GGKAKAYHVDISDEQQVKDFASE   75 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc------CCeEEEEEeecCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999999 7777777777542      13688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.+|++|+||||||... ..++.+.+.+.|++++++|+.+++.++++++|+|++++ |+||++||..+..+.      
T Consensus        76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------  148 (272)
T PRK08589         76 IKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD------  148 (272)
T ss_pred             HHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC------
Confidence            9999999999999999864 35677889999999999999999999999999998765 899999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|++||+|+++|+|.
T Consensus       149 ---------~~~~~Y~asKaal~~l~~~  167 (272)
T PRK08589        149 ---------LYRSGYNAAKGAVINFTKS  167 (272)
T ss_pred             ---------CCCchHHHHHHHHHHHHHH
Confidence                     7788999999999999874

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=6.7e-31  Score=221.30  Aligned_cols=167  Identities=17%  Similarity=0.150  Sum_probs=141.2

Q ss_pred             CCCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           58 LPLPPVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .+..+++||+++||||+  +|||+++|++|+++|++|++++|+.+. .+..+++.++..      .+.++.||++|.+++
T Consensus         3 ~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~------~~~~~~~D~~~~~~v   75 (258)
T PRK07533          3 QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEELD------APIFLPLDVREPGQL   75 (258)
T ss_pred             CcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhhc------cceEEecCcCCHHHH
Confidence            34556889999999998  599999999999999999999998643 223344443321      346789999999999


Q ss_pred             HHHHHHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      +++++++.+++|++|++|||||+...    .++.+.+.++|++++++|+.+++++++.++|+|.+  .|+||++||..+.
T Consensus        76 ~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~  153 (258)
T PRK07533         76 EAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAE  153 (258)
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccc
Confidence            99999999999999999999997642    45678899999999999999999999999999964  4899999998877


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+.               +.+..|++||+|+++|+|.
T Consensus       154 ~~~---------------~~~~~Y~asKaal~~l~~~  175 (258)
T PRK07533        154 KVV---------------ENYNLMGPVKAALESSVRY  175 (258)
T ss_pred             cCC---------------ccchhhHHHHHHHHHHHHH
Confidence            665               7888999999999999874

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.4e-31  Score=219.51  Aligned_cols=166  Identities=25%  Similarity=0.373  Sum_probs=148.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.      +.++.++.+|+++++++++++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   76 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE------GGEAVALAGDVRDEAYAKALVAL   76 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888877776552      13688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCCccc
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVDTED  219 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~~~~  219 (249)
                      +.++++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|++++.|+||++||..+. .+.     
T Consensus        77 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----  151 (254)
T PRK07478         77 AVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF-----  151 (254)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC-----
Confidence            9999999999999999853 356778899999999999999999999999999998888999999998876 344     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|++.
T Consensus       152 ----------~~~~~Y~~sK~a~~~~~~~  170 (254)
T PRK07478        152 ----------PGMAAYAASKAGLIGLTQV  170 (254)
T ss_pred             ----------CCcchhHHHHHHHHHHHHH
Confidence                      7788999999999999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.1e-31  Score=225.40  Aligned_cols=167  Identities=23%  Similarity=0.336  Sum_probs=150.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++..       ..++..+.+|++|.++++++
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-------~~~~~~~~~Dv~d~~~v~~~   75 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-------DDRVLTVVADVTDLAAMQAA   75 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-------CCcEEEEEecCCCHHHHHHH
Confidence            34568899999999999999999999999999999999999888777665532       13567778999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+.++++|++|||||+....++.+.+.+++++++++|+.+++.++++++|+|.++ .|+||++||..++.+.    
T Consensus        76 ~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~----  150 (296)
T PRK05872         76 AEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAA----  150 (296)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCC----
Confidence            99999999999999999999877888899999999999999999999999999999875 4899999999998887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+++++|++.
T Consensus       151 -----------~~~~~Y~asKaal~~~~~~  169 (296)
T PRK05872        151 -----------PGMAAYCASKAGVEAFANA  169 (296)
T ss_pred             -----------CCchHHHHHHHHHHHHHHH
Confidence                       7889999999999999873

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.97  E-value=9.6e-32  Score=208.95  Aligned_cols=165  Identities=26%  Similarity=0.291  Sum_probs=148.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++.|.++||||++|||++++..|++.|++|++.+++...+++++..+...       .+-..+.||+++.++++..+++
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-------~~h~aF~~DVS~a~~v~~~l~e   83 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-------GDHSAFSCDVSKAHDVQNTLEE   83 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-------CccceeeeccCcHHHHHHHHHH
Confidence            356789999999999999999999999999999999988888887666442       2446789999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc--CCCCeEEEEcCCccccCCCCccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR--GSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~--~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ..+.+|++++||||||+.....+..++.++|++.+++|+.|.|+++|++...|..  +++++||||||+.|..|.     
T Consensus        84 ~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN-----  158 (256)
T KOG1200|consen   84 MEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN-----  158 (256)
T ss_pred             HHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc-----
Confidence            9999999999999999998888889999999999999999999999999998553  445599999999999998     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                -++..|+|||+++.+|+|.
T Consensus       159 ----------~GQtnYAAsK~GvIgftkt  177 (256)
T KOG1200|consen  159 ----------FGQTNYAASKGGVIGFTKT  177 (256)
T ss_pred             ----------ccchhhhhhcCceeeeeHH
Confidence                      8999999999999999874

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-30  Score=227.50  Aligned_cols=168  Identities=21%  Similarity=0.321  Sum_probs=153.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++.+++++++||||++|||+++|++|+++|++|++++|+++++++..+++.+.      +.++.++.+|++|.+++++++
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~------g~~~~~v~~Dv~d~~~v~~~~   76 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA------GGEALAVVADVADAEAVQAAA   76 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc------CCcEEEEEecCCCHHHHHHHH
Confidence            34578899999999999999999999999999999999998888887777652      246888999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|++++.|+||++||..++.+.     
T Consensus        77 ~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~-----  151 (334)
T PRK07109         77 DRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI-----  151 (334)
T ss_pred             HHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC-----
Confidence            999999999999999999877778889999999999999999999999999999999878999999999998877     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                +....|++||+|+++|++.
T Consensus       152 ----------~~~~~Y~asK~a~~~~~~~  170 (334)
T PRK07109        152 ----------PLQSAYCAAKHAIRGFTDS  170 (334)
T ss_pred             ----------CcchHHHHHHHHHHHHHHH
Confidence                      7888999999999999863

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=4.3e-31  Score=207.72  Aligned_cols=158  Identities=38%  Similarity=0.553  Sum_probs=144.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC--hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN--LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      |+++||||++|||+++|++|+++|+ +|++++|+  .+..++..+++...      +.++.++++|+++.++++++++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~~~   74 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP------GAKITFIECDLSDPESIRALIEEV   74 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT------TSEEEEEESETTSHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc------cccccccccccccccccccccccc
Confidence            6899999999999999999999966 78888998  67777777777742      258999999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.++++|++|||||.....++.+.+.+++++++++|+.+++.+.++++|    ++.|+||++||.++..+.        
T Consensus        75 ~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~--------  142 (167)
T PF00106_consen   75 IKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGS--------  142 (167)
T ss_dssp             HHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSS--------
T ss_pred             ccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCC--------
Confidence            99999999999999998888889999999999999999999999999999    447999999999999988        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|++||+|+++|++.
T Consensus       143 -------~~~~~Y~askaal~~~~~~  161 (167)
T PF00106_consen  143 -------PGMSAYSASKAALRGLTQS  161 (167)
T ss_dssp             -------TTBHHHHHHHHHHHHHHHH
T ss_pred             -------CCChhHHHHHHHHHHHHHH
Confidence                   8999999999999999874

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.97  E-value=6.4e-31  Score=221.46  Aligned_cols=164  Identities=16%  Similarity=0.156  Sum_probs=141.0

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChH--HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLK--AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      +++||+++||||+  +|||+++|++|+++|++|++.+|+.+  +.++..+++.+..      .++.++++|++|.+++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~v~~   76 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL------NPSLFLPCDVQDDAQIEE   76 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc------CcceEeecCcCCHHHHHH
Confidence            4688999999986  89999999999999999999876543  3445555554421      246788999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +++++.+++|++|++|||||+..    ..++.+.+.++|++++++|+.+++.++++++|.|.+  .|+||++||..+..+
T Consensus        77 ~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~  154 (258)
T PRK07370         77 TFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRA  154 (258)
T ss_pred             HHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccC
Confidence            99999999999999999999764    256778899999999999999999999999999975  489999999988777


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               +++..|++||+|+.+|+|.
T Consensus       155 ~---------------~~~~~Y~asKaal~~l~~~  174 (258)
T PRK07370        155 I---------------PNYNVMGVAKAALEASVRY  174 (258)
T ss_pred             C---------------cccchhhHHHHHHHHHHHH
Confidence            6               7888999999999999874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.4e-30  Score=219.64  Aligned_cols=163  Identities=13%  Similarity=0.103  Sum_probs=139.6

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++||+++||||++  |||+++|++|+++|++|++.+|+. +.++..+++.++..      ....+++|++|++++++++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g------~~~~~~~Dv~~~~~v~~~~   77 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG------CNFVSELDVTNPKSISNLF   77 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC------CceEEEccCCCHHHHHHHH
Confidence            46789999999997  999999999999999999999883 44455555554321      1246789999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+++|++|+||||||....    .++.+.+.++|++.+++|+.+++.++++++|+|.+  +|+||++||..+..+. 
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~-  154 (260)
T PRK06603         78 DDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVI-  154 (260)
T ss_pred             HHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCC-
Confidence            9999999999999999997542    46778899999999999999999999999999964  4899999999887666 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    +.+..|++||+|+.+|+|.
T Consensus       155 --------------~~~~~Y~asKaal~~l~~~  173 (260)
T PRK06603        155 --------------PNYNVMGVAKAALEASVKY  173 (260)
T ss_pred             --------------CcccchhhHHHHHHHHHHH
Confidence                          7888999999999999874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=8.9e-31  Score=220.46  Aligned_cols=165  Identities=14%  Similarity=0.123  Sum_probs=139.9

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+... ++..+++.++..    +.++..+++|++|.+++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~   78 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLE----GQESLLLPCDVTSDEEITACF   78 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcC----CCceEEEecCCCCHHHHHHHH
Confidence            4678999999997  899999999999999999999876321 222333333321    146788999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+++|++|++|||||+..    ..++.+.+.++|++.+++|+.+++.++++++|+|.+  +|+|||+||..+..+. 
T Consensus        79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~-  155 (257)
T PRK08594         79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVV-  155 (257)
T ss_pred             HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCC-
Confidence            999999999999999999764    245678899999999999999999999999999965  4899999999988776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    +.+..|++||+|+++|+|.
T Consensus       156 --------------~~~~~Y~asKaal~~l~~~  174 (257)
T PRK08594        156 --------------QNYNVMGVAKASLEASVKY  174 (257)
T ss_pred             --------------CCCchhHHHHHHHHHHHHH
Confidence                          7888999999999999974

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-30  Score=224.15  Aligned_cols=170  Identities=21%  Similarity=0.213  Sum_probs=141.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh----------HHHHHHHHHHHHhhcCCCCCCceEEEEccCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL----------KAANELIQKWQEEWSGKGLPLNIEAMELDLL  130 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~----------~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  130 (249)
                      .+++||+++||||++|||+++|++|++.|++|++++|+.          +++++..+++...      +.++.++.+|++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~Dv~   77 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA------GGRGIAVQVDHL   77 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc------CCceEEEEcCCC
Confidence            457899999999999999999999999999999999984          3444554554331      236788999999


Q ss_pred             CHHHHHHHHHHHhccCCCccEEEecc-ccCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEE
Q 025705          131 SLDSVVRFSEAWNGRLGPLHVLINNA-GIFS----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINV  205 (249)
Q Consensus       131 ~~~~v~~~~~~~~~~~g~id~linna-g~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~v  205 (249)
                      |+++++++++++.+.+|++|+||||| |...    ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++
T Consensus        78 ~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~i  157 (305)
T PRK08303         78 VPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEI  157 (305)
T ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEE
Confidence            99999999999999999999999999 7531    245677888999999999999999999999999988777999999


Q ss_pred             cCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          206 NSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       206 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ||..+.....            +.++...|++||+|+.+|+|.
T Consensus       158 sS~~~~~~~~------------~~~~~~~Y~asKaal~~lt~~  188 (305)
T PRK08303        158 TDGTAEYNAT------------HYRLSVFYDLAKTSVNRLAFS  188 (305)
T ss_pred             CCccccccCc------------CCCCcchhHHHHHHHHHHHHH
Confidence            9976644320            114567899999999999874

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=214.42  Aligned_cols=163  Identities=15%  Similarity=0.157  Sum_probs=143.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++..+.+|+++++++++++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~------~~~~~~~~~D~~~~~~~~~~~~~   75 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL------TDNVYSFQLKDFSQESIRHLFDA   75 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCCeEEEEccCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999999988888777652      13677889999999999999999


Q ss_pred             HhccCC-CccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          142 WNGRLG-PLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       142 ~~~~~g-~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +.+++| ++|++|||||.. ...++.+.+.+++.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+.       
T Consensus        76 ~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------  148 (227)
T PRK08862         76 IEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------  148 (227)
T ss_pred             HHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------
Confidence            999998 999999999854 345678889999999999999999999999999998754 6999999997533       


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+.+|+|.
T Consensus       149 -----------~~~~~Y~asKaal~~~~~~  167 (227)
T PRK08862        149 -----------QDLTGVESSNALVSGFTHS  167 (227)
T ss_pred             -----------CCcchhHHHHHHHHHHHHH
Confidence                       4567899999999999874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.4e-30  Score=219.67  Aligned_cols=164  Identities=14%  Similarity=0.105  Sum_probs=138.4

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGS--TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGa--s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+++|+++||||  ++|||+++|++|+++|++|++.+|+. +.++..+++.+..      .....++||++|++++++++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~   75 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL------DSELVFRCDVASDDEINQVF   75 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc------CCceEEECCCCCHHHHHHHH
Confidence            478899999997  67999999999999999999988763 4444555554422      12457899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCC----C-CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIG----E-PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~----~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      +++.+++|++|++|||||+....    + +.+.+.++|++++++|+.++++++|+++|+|+++ +|+||++||..+..+.
T Consensus        76 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~  154 (261)
T PRK08690         76 ADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAI  154 (261)
T ss_pred             HHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCC
Confidence            99999999999999999986432    2 3567889999999999999999999999999765 4899999999888776


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     |++..|++||+|+.+|+|.
T Consensus       155 ---------------~~~~~Y~asKaal~~l~~~  173 (261)
T PRK08690        155 ---------------PNYNVMGMAKASLEAGIRF  173 (261)
T ss_pred             ---------------CCcccchhHHHHHHHHHHH
Confidence                           8889999999999999874

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=217.40  Aligned_cols=169  Identities=21%  Similarity=0.293  Sum_probs=147.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...      +.++..+.+|++|+++++++++
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS------GGKVVPVCCDVSQHQQVTSMLD   78 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCeEEEEEccCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888877776542      1367888999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..+..+   
T Consensus        79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---  155 (253)
T PRK05867         79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP---  155 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC---
Confidence            9999999999999999987777788889999999999999999999999999998764 579999999887643210   


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                +....|++||+|+++|+|.
T Consensus       156 ----------~~~~~Y~asKaal~~~~~~  174 (253)
T PRK05867        156 ----------QQVSHYCASKAAVIHLTKA  174 (253)
T ss_pred             ----------CCccchHHHHHHHHHHHHH
Confidence                      2457899999999999874

>PRK06398 aldose dehydrogenase; Validated

Probab=99.97  E-value=1.5e-30  Score=219.07  Aligned_cols=156  Identities=25%  Similarity=0.370  Sum_probs=142.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+..                 .++.++.+|++|+++++++++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------------~~~~~~~~D~~~~~~i~~~~~   64 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------------NDVDYFKVDVSNKEQVIKGID   64 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------------CceEEEEccCCCHHHHHHHHH
Confidence            357899999999999999999999999999999999985321                 147789999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.      
T Consensus        65 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------  138 (258)
T PRK06398         65 YVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT------  138 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC------
Confidence            99999999999999999877778888999999999999999999999999999998888999999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       139 ---------~~~~~Y~~sKaal~~~~~~  157 (258)
T PRK06398        139 ---------RNAAAYVTSKHAVLGLTRS  157 (258)
T ss_pred             ---------CCCchhhhhHHHHHHHHHH
Confidence                     7888999999999999874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.6e-30  Score=218.29  Aligned_cols=162  Identities=10%  Similarity=0.093  Sum_probs=137.8

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ +++++..+++....      .++..+.+|++|+++++++++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~   76 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL------GSDIVLPCDVAEDASIDAMFA   76 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc------CCceEeecCCCCHHHHHHHHH
Confidence            6789999999986  99999999999999999999987 44555556655432      245678899999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCC-----CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGE-----PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      ++.+.+|++|++|||||+....+     +.+.+.++|++++++|+.+++.+++++.|.|.+  +|+||++||..+..+. 
T Consensus        77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~-  153 (262)
T PRK07984         77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAI-  153 (262)
T ss_pred             HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCC-
Confidence            99999999999999999754322     456788999999999999999999999986643  4899999999887666 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    +.+..|++||+|+++|+|.
T Consensus       154 --------------~~~~~Y~asKaal~~l~~~  172 (262)
T PRK07984        154 --------------PNYNVMGLAKASLEANVRY  172 (262)
T ss_pred             --------------CCcchhHHHHHHHHHHHHH
Confidence                          7888999999999999984

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.97  E-value=1.4e-30  Score=223.37  Aligned_cols=170  Identities=17%  Similarity=0.149  Sum_probs=141.2

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhh-------cCCCCCCceEEEEccC--
Q 025705           61 PPVNDLTCIVTGS--TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW-------SGKGLPLNIEAMELDL--  129 (249)
Q Consensus        61 ~~~~~~~vlItGa--s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~D~--  129 (249)
                      .+++||+++||||  ++|||+++|+.|++.|++|++ +|+.+++++..+++.+..       ...........+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3489999999999  899999999999999999998 888888888887775310       0000001246788898  


Q ss_pred             CC------------------HHHHHHHHHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 025705          130 LS------------------LDSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSIL  189 (249)
Q Consensus       130 ~~------------------~~~v~~~~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~  189 (249)
                      ++                  +++++++++++.+.+|++|+||||||...  ..++.+.+.++|++++++|+.+++.++|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            33                  44899999999999999999999998643  36788899999999999999999999999


Q ss_pred             hchhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCc-ccchhhHHHHHhhhhc
Q 025705          190 LFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL-MGYSGSKLAQVKLETK  248 (249)
Q Consensus       190 ~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~asKaal~~l~~~  248 (249)
                      ++|+|+++  |+|||+||..+..+.               |++ ..|++||+|+++|+|.
T Consensus       164 ~~p~m~~~--G~II~isS~a~~~~~---------------p~~~~~Y~asKaAl~~l~~~  206 (303)
T PLN02730        164 FGPIMNPG--GASISLTYIASERII---------------PGYGGGMSSAKAALESDTRV  206 (303)
T ss_pred             HHHHHhcC--CEEEEEechhhcCCC---------------CCCchhhHHHHHHHHHHHHH
Confidence            99999764  899999999888776               655 4799999999999874

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=217.06  Aligned_cols=168  Identities=18%  Similarity=0.247  Sum_probs=146.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.+.+++..+++....     +.++.++.+|++|++++++++
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~   78 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-----GIKAKAYPLNILEPETYKELF   78 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHH
Confidence            4678999999999999999999999999999998865 5566666666665421     247889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCC------CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          140 EAWNGRLGPLHVLINNAGIFS------IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +++.+.++++|++|||||...      ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (260)
T PRK08416         79 KKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY  158 (260)
T ss_pred             HHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC
Confidence            999999999999999998642      24566778899999999999999999999999999887899999999988777


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               +.+..|++||+|+++|++.
T Consensus       159 ~---------------~~~~~Y~asK~a~~~~~~~  178 (260)
T PRK08416        159 I---------------ENYAGHGTSKAAVETMVKY  178 (260)
T ss_pred             C---------------CCcccchhhHHHHHHHHHH
Confidence            6               7888999999999999874

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.3e-30  Score=221.84  Aligned_cols=180  Identities=43%  Similarity=0.588  Sum_probs=153.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ...++.+++++||||++|||+++|++|+++|++|++.+|+.++.++.++++.+...    ..++.++++|+++.++|+++
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~----~~~i~~~~lDLssl~SV~~f  104 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKA----NQKIRVIQLDLSSLKSVRKF  104 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCC----CCceEEEECCCCCHHHHHHH
Confidence            34567889999999999999999999999999999999999999999999988432    25889999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      .++++..++++|++|||||+.....  ..+.|.+|.++.+|++|+|.+++.++|.|++...+||||+||..+ ......+
T Consensus       105 a~~~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~  181 (314)
T KOG1208|consen  105 AEEFKKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLK  181 (314)
T ss_pred             HHHHHhcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchh
Confidence            9999999999999999999975433  678899999999999999999999999999887799999999987 2222222


Q ss_pred             cccccccccc--CCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRK--YTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~--~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++   ++.+.  +....+|+.||.++..++++
T Consensus       182 ~l---~~~~~~~~~~~~~Y~~SKla~~l~~~e  210 (314)
T KOG1208|consen  182 DL---SGEKAKLYSSDAAYALSKLANVLLANE  210 (314)
T ss_pred             hc---cchhccCccchhHHHHhHHHHHHHHHH
Confidence            22   22222  55566799999999988764

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.9e-30  Score=215.35  Aligned_cols=170  Identities=21%  Similarity=0.245  Sum_probs=148.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH-HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++.+.      +.++..+.+|++|+++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~i~~~   76 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA------GRRAIQIAADVTSKADLRAA   76 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHH
Confidence            34678999999999999999999999999999999999764 455555555442      13678889999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+.++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|++++.|+||++||..+..+.+.  
T Consensus        77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--  154 (254)
T PRK06114         77 VARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--  154 (254)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--
Confidence            999999999999999999987767788889999999999999999999999999999888899999999998876511  


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +....|++||+|+++|+|.
T Consensus       155 -----------~~~~~Y~~sKaa~~~l~~~  173 (254)
T PRK06114        155 -----------LLQAHYNASKAGVIHLSKS  173 (254)
T ss_pred             -----------CCcchHHHHHHHHHHHHHH
Confidence                       2367899999999999874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.6e-30  Score=218.57  Aligned_cols=163  Identities=13%  Similarity=0.100  Sum_probs=138.6

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+. ...+..+++.++..      ....+++|++|++++++++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~------~~~~~~~Dl~~~~~v~~~~   79 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELG------AFVAGHCDVTDEASIDAVF   79 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcC------CceEEecCCCCHHHHHHHH
Confidence            3578999999997  8999999999999999999998873 33344444444321      2456899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+.+|++|++|||||+...    .++.+.+.++|++.+++|+.+++.++++++|+|.+  +|+||++||..+..+. 
T Consensus        80 ~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~-  156 (272)
T PRK08159         80 ETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVM-  156 (272)
T ss_pred             HHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCC-
Confidence            9999999999999999998642    46678899999999999999999999999999964  4899999998877665 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    |.+..|++||+|+.+|+|.
T Consensus       157 --------------p~~~~Y~asKaal~~l~~~  175 (272)
T PRK08159        157 --------------PHYNVMGVAKAALEASVKY  175 (272)
T ss_pred             --------------CcchhhhhHHHHHHHHHHH
Confidence                          7888999999999999874

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.8e-30  Score=217.50  Aligned_cols=162  Identities=27%  Similarity=0.334  Sum_probs=147.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++||||++|||+++|++|+++|++|++++|+++++++..+++.          ++.++.+|++|++++++++++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~D~~~~~~~~~~~~~   71 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----------LVVGGPLDVTDPASFAAFLDA   71 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------cceEEEccCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999999888776655432          367889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.+.+++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.       
T Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  144 (273)
T PRK07825         72 VEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-------  144 (273)
T ss_pred             HHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-------
Confidence            9999999999999999987778888899999999999999999999999999999888999999999998887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+++.+|++.
T Consensus       145 --------~~~~~Y~asKaa~~~~~~~  163 (273)
T PRK07825        145 --------PGMATYCASKHAVVGFTDA  163 (273)
T ss_pred             --------CCCcchHHHHHHHHHHHHH
Confidence                    8889999999999988753

>PRK06194 hypothetical protein; Provisional

Probab=99.97  E-value=7.7e-30  Score=217.66  Aligned_cols=167  Identities=23%  Similarity=0.249  Sum_probs=149.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++++++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...      +.++.++.+|++|.++++++++
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~   75 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ------GAEVLGVRTDVSDAAQVEALAD   75 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHH
Confidence            3567899999999999999999999999999999999988877777666542      2468889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC------CeEEEEcCCccccCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP------SRIINVNSVMHYVGF  214 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~------g~Iv~vsS~~~~~~~  214 (249)
                      .+.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|+++..      |+||++||.+++.+.
T Consensus        76 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  155 (287)
T PRK06194         76 AALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP  155 (287)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC
Confidence            99999999999999999987777888899999999999999999999999999987654      799999999998876


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++.+.|++||+++++|++.
T Consensus       156 ---------------~~~~~Y~~sK~a~~~~~~~  174 (287)
T PRK06194        156 ---------------PAMGIYNVSKHAVVSLTET  174 (287)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHH
Confidence                           7788999999999999864

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.5e-30  Score=215.55  Aligned_cols=162  Identities=22%  Similarity=0.245  Sum_probs=143.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.++++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dl~~~~~~~~~~~   72 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG---------ERARFIATDITDDAAIERAVA   72 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CeeEEEEecCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999999877666654431         367889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||...... .+.+.++|++.+++|+.+++.++++++|+|+ ++.|+||++||.++..+.      
T Consensus        73 ~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~------  144 (261)
T PRK08265         73 TVVARFGRVDILVNLACTYLDDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQ------  144 (261)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCC------
Confidence            99999999999999999764433 3568899999999999999999999999998 556899999999988887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|+|+++|+|.
T Consensus       145 ---------~~~~~Y~asKaa~~~~~~~  163 (261)
T PRK08265        145 ---------TGRWLYPASKAAIRQLTRS  163 (261)
T ss_pred             ---------CCCchhHHHHHHHHHHHHH
Confidence                     7788999999999999874

>PRK05599 hypothetical protein; Provisional

Probab=99.97  E-value=6.2e-30  Score=213.96  Aligned_cols=162  Identities=20%  Similarity=0.244  Sum_probs=143.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||++|||+++|++|+ +|++|++++|+.+++++..+++++..     ..++.++.+|++|.++++++++++.+.
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~   74 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-----ATSVHVLSFDAQDLDTHRELVKQTQEL   74 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-----CCceEEEEcccCCHHHHHHHHHHHHHh
Confidence            479999999999999999999 59999999999999988888876531     124778999999999999999999999


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      +|++|++|||||.....+..+.+.+.+.+++++|+.+++.+++.++|.|.+++ +|+||++||.++..+.          
T Consensus        75 ~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------  144 (246)
T PRK05599         75 AGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR----------  144 (246)
T ss_pred             cCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC----------
Confidence            99999999999987555556677788899999999999999999999998764 6999999999988776          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++...|++||+|+++|++.
T Consensus       145 -----~~~~~Y~asKaa~~~~~~~  163 (246)
T PRK05599        145 -----RANYVYGSTKAGLDAFCQG  163 (246)
T ss_pred             -----cCCcchhhHHHHHHHHHHH
Confidence                 7888999999999999874

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.97  E-value=6.1e-31  Score=209.29  Aligned_cols=159  Identities=21%  Similarity=0.280  Sum_probs=140.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++.||.|++||+.+|||++++++|+++|..+.+++.+.|..+ ..+++++..    ...++.+++||+++..++++.+++
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~----p~~~v~F~~~DVt~~~~~~~~f~k   76 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAIN----PSVSVIFIKCDVTNRGDLEAAFDK   76 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccC----CCceEEEEEeccccHHHHHHHHHH
Confidence            577999999999999999999999999998887777666533 334454433    346899999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC---CCeEEEEcCCccccCCCCcc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS---PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +.+.+|.||++||+||+..        +.+|++++++|+.|.+.-+..++|+|.+++   +|-|||+||+.|+.|.    
T Consensus        77 i~~~fg~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~----  144 (261)
T KOG4169|consen   77 ILATFGTIDILINGAGILD--------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM----  144 (261)
T ss_pred             HHHHhCceEEEEccccccc--------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc----
Confidence            9999999999999999863        567999999999999999999999999864   5789999999999998    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 |-.+.|+|||+++.+|+|.
T Consensus       145 -----------p~~pVY~AsKaGVvgFTRS  163 (261)
T KOG4169|consen  145 -----------PVFPVYAASKAGVVGFTRS  163 (261)
T ss_pred             -----------ccchhhhhcccceeeeehh
Confidence                       8999999999999999985

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=212.39  Aligned_cols=167  Identities=26%  Similarity=0.346  Sum_probs=150.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...      +.++..+.+|++|.++++++++
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~~~~~~~   78 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE------GIKAHAAPFNVTHKQEVEAAIE   78 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc------CCeEEEEecCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999999999988888777776542      1367788999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++++++.|.+++.|+||++||..+..+.      
T Consensus        79 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------  152 (254)
T PRK08085         79 HIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR------  152 (254)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC------
Confidence            99999999999999999876677888899999999999999999999999999988778999999999887776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|+|+++|+|.
T Consensus       153 ---------~~~~~Y~~sK~a~~~~~~~  171 (254)
T PRK08085        153 ---------DTITPYAASKGAVKMLTRG  171 (254)
T ss_pred             ---------CCCcchHHHHHHHHHHHHH
Confidence                     7788999999999999874

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=9.1e-30  Score=212.17  Aligned_cols=167  Identities=28%  Similarity=0.393  Sum_probs=147.1

Q ss_pred             CCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           56 NPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        56 ~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .........+|.|+|||+.+|+|+.+|++|.++|+.|.+.+.+++..+....+...        .+...++.|+++++++
T Consensus        20 ~~~~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s--------~rl~t~~LDVT~~esi   91 (322)
T KOG1610|consen   20 ERQVLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKS--------PRLRTLQLDVTKPESV   91 (322)
T ss_pred             hhhcccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcC--------CcceeEeeccCCHHHH
Confidence            34556678889999999999999999999999999999999888777766665532        4788889999999999


Q ss_pred             HHHHHHHhccCC--CccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc
Q 025705          136 VRFSEAWNGRLG--PLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV  212 (249)
Q Consensus       136 ~~~~~~~~~~~g--~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~  212 (249)
                      +++.+.+++..+  ++..||||||+. ..++.+..+.+++++.+++|++|++.++++++|++++. +||||||||+.|..
T Consensus        92 ~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~  170 (322)
T KOG1610|consen   92 KEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRV  170 (322)
T ss_pred             HHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCc
Confidence            999998887543  499999999976 46778889999999999999999999999999998776 49999999999988


Q ss_pred             CCCCccccccccccccCCCcccchhhHHHHHhhh
Q 025705          213 GFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~  246 (249)
                      +.               |...+|++||+|++.|+
T Consensus       171 ~~---------------p~~g~Y~~SK~aVeaf~  189 (322)
T KOG1610|consen  171 AL---------------PALGPYCVSKFAVEAFS  189 (322)
T ss_pred             cC---------------cccccchhhHHHHHHHH
Confidence            87               89999999999999986

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=9.7e-30  Score=214.52  Aligned_cols=163  Identities=12%  Similarity=0.114  Sum_probs=134.4

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGS--TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGa--s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|.. +.++..+++.++..      ....+.+|++|++++++++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~   75 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFG------SDLVFPCDVASDEQIDALF   75 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcC------CcceeeccCCCHHHHHHHH
Confidence            467899999996  68999999999999999999987652 22233334433221      2346789999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCC----C-CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIG----E-PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~----~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      +++.+++|++|++|||||+....    + +.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.
T Consensus        76 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~  153 (260)
T PRK06997         76 ASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVV  153 (260)
T ss_pred             HHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCC
Confidence            99999999999999999986432    2 346788999999999999999999999999943  4899999999887665


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     +.+..|++||+|+.+|+|.
T Consensus       154 ---------------~~~~~Y~asKaal~~l~~~  172 (260)
T PRK06997        154 ---------------PNYNTMGLAKASLEASVRY  172 (260)
T ss_pred             ---------------CCcchHHHHHHHHHHHHHH
Confidence                           7788899999999999874

>PLN02253 xanthoxin dehydrogenase

Probab=99.97  E-value=1.2e-29  Score=215.76  Aligned_cols=169  Identities=23%  Similarity=0.271  Sum_probs=147.7

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .+..++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++..       ..++.++++|++|.+++++
T Consensus        11 ~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~   83 (280)
T PLN02253         11 LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-------EPNVCFFHCDVTVEDDVSR   83 (280)
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-------CCceEEEEeecCCHHHHHH
Confidence            345568899999999999999999999999999999999987766655554421       1368899999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSI--GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++++.+.++++|++|||||....  .++.+.+.+++++++++|+.+++.++++++|.|.+++.|+||+++|..+..+. 
T Consensus        84 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-  162 (280)
T PLN02253         84 AVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-  162 (280)
T ss_pred             HHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-
Confidence            999999999999999999997642  35678899999999999999999999999999988778999999999988776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       163 --------------~~~~~Y~~sK~a~~~~~~~  181 (280)
T PLN02253        163 --------------LGPHAYTGSKHAVLGLTRS  181 (280)
T ss_pred             --------------CCCcccHHHHHHHHHHHHH
Confidence                          6677899999999999874

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-29  Score=212.35  Aligned_cols=169  Identities=24%  Similarity=0.373  Sum_probs=152.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ...++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~   77 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL------GIEAHGYVCDVTDEDGVQAM   77 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHH
Confidence            345678999999999999999999999999999999999998887777666541      24688999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|++++.|+||++||..+..+.    
T Consensus        78 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----  153 (265)
T PRK07097         78 VSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR----  153 (265)
T ss_pred             HHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC----
Confidence            9999999999999999999987777888899999999999999999999999999998888999999999888776    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|+++|+|+.+|++.
T Consensus       154 -----------~~~~~Y~~sKaal~~l~~~  172 (265)
T PRK07097        154 -----------ETVSAYAAAKGGLKMLTKN  172 (265)
T ss_pred             -----------CCCccHHHHHHHHHHHHHH
Confidence                       7888999999999999874

>PRK09242 tropinone reductase; Provisional

Probab=99.97  E-value=2.5e-29  Score=211.26  Aligned_cols=170  Identities=23%  Similarity=0.302  Sum_probs=153.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+    ..++..+.+|+++++++++++
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dl~~~~~~~~~~   79 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP----EREVHGLAADVSDDEDRRAIL   79 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC----CCeEEEEECCCCCHHHHHHHH
Confidence            4567899999999999999999999999999999999999888887777765322    247889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.++++|++|||||.....+..+.+.+++++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.     
T Consensus        80 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----  154 (257)
T PRK09242         80 DWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----  154 (257)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----
Confidence            999999999999999999876667778899999999999999999999999999998878999999999888776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|+++++|++.
T Consensus       155 ----------~~~~~Y~~sK~a~~~~~~~  173 (257)
T PRK09242        155 ----------RSGAPYGMTKAALLQMTRN  173 (257)
T ss_pred             ----------CCCcchHHHHHHHHHHHHH
Confidence                      7888999999999999874

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=212.28  Aligned_cols=166  Identities=21%  Similarity=0.334  Sum_probs=147.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+ ++.++..+.+.+.      +.++.++.+|+++.++++++++
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~   83 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE------GRKVTFVQVDLTKPESAEKVVK   83 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHHHH
Confidence            45789999999999999999999999999999999998 4555554444331      1368899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.+|++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|+|++++.|+||++||..+..+.      
T Consensus        84 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  157 (258)
T PRK06935         84 EALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG------  157 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC------
Confidence            99999999999999999877777888899999999999999999999999999998888999999999988776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|+++|+|+++|++.
T Consensus       158 ---------~~~~~Y~asK~a~~~~~~~  176 (258)
T PRK06935        158 ---------KFVPAYTASKHGVAGLTKA  176 (258)
T ss_pred             ---------CCchhhHHHHHHHHHHHHH
Confidence                     7788999999999999874

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.5e-29  Score=211.37  Aligned_cols=167  Identities=26%  Similarity=0.346  Sum_probs=143.9

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcC-----------hHHHHHHHHHHHHhhcCCCCCCceEEEEc
Q 025705           61 PPVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRN-----------LKAANELIQKWQEEWSGKGLPLNIEAMEL  127 (249)
Q Consensus        61 ~~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  127 (249)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+           .+..++..+++.+    .  +.++.++.+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--g~~~~~~~~   75 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK----N--GVKVSSMEL   75 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh----c--CCeEEEEEc
Confidence            46889999999999  599999999999999999987643           1222233333332    1  247889999


Q ss_pred             cCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       128 D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                      |++|.++++++++++.+.+|++|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|.+++.|+||++||
T Consensus        76 D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  155 (256)
T PRK12859         76 DLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTS  155 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence            99999999999999999999999999999987777888999999999999999999999999999998887899999999


Q ss_pred             CccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          208 VMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+.               ++...|++||+|+++|++.
T Consensus       156 ~~~~~~~---------------~~~~~Y~~sK~a~~~l~~~  181 (256)
T PRK12859        156 GQFQGPM---------------VGELAYAATKGAIDALTSS  181 (256)
T ss_pred             cccCCCC---------------CCchHHHHHHHHHHHHHHH
Confidence            9887766               7889999999999999874

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.97  E-value=2.2e-29  Score=211.26  Aligned_cols=165  Identities=22%  Similarity=0.333  Sum_probs=144.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++++..  ++..+++.+.      ..++..+++|++|.++++++++
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~   77 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL------GRRFLSLTADLRKIDGIPALLE   77 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999998887642  3344444331      1367889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.     
T Consensus        78 ~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  152 (253)
T PRK08993         78 RAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG-----  152 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC-----
Confidence            9999999999999999987777788899999999999999999999999999998764 5899999999888776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                +....|++||+|+++|+|.
T Consensus       153 ----------~~~~~Y~~sKaa~~~~~~~  171 (253)
T PRK08993        153 ----------IRVPSYTASKSGVMGVTRL  171 (253)
T ss_pred             ----------CCCcchHHHHHHHHHHHHH
Confidence                      6778999999999999874

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-29  Score=210.93  Aligned_cols=163  Identities=21%  Similarity=0.303  Sum_probs=145.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.      ..++.++.+|++|+++++++++++.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF------PGQVLTVQMDVRNPEDVQKMVEQIDE   74 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999988777776666542      13688999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      .++++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|.++ ..|+||++||..+..+.         
T Consensus        75 ~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------  145 (252)
T PRK07677         75 KFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG---------  145 (252)
T ss_pred             HhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC---------
Confidence            99999999999997655677888999999999999999999999999998764 36899999999887766         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            +....|++||+|+++|+|.
T Consensus       146 ------~~~~~Y~~sKaa~~~~~~~  164 (252)
T PRK07677        146 ------PGVIHSAAAKAGVLAMTRT  164 (252)
T ss_pred             ------CCCcchHHHHHHHHHHHHH
Confidence                  6778899999999999874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=210.20  Aligned_cols=168  Identities=25%  Similarity=0.377  Sum_probs=151.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.      +.++..+.+|++|.+++++++
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~------~~~~~~~~~D~~~~~~~~~~~   78 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ------GLSAHALAFDVTDHDAVRAAI   78 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc------CceEEEEEccCCCHHHHHHHH
Confidence            34678999999999999999999999999999999999988877776666541      246888999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++++.+.|.+++.|+||++||..+..+.     
T Consensus        79 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  153 (255)
T PRK07523         79 DAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR-----  153 (255)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC-----
Confidence            999999999999999999887778888899999999999999999999999999998888999999999877766     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|+++++++|.
T Consensus       154 ----------~~~~~y~~sK~a~~~~~~~  172 (255)
T PRK07523        154 ----------PGIAPYTATKGAVGNLTKG  172 (255)
T ss_pred             ----------CCCccHHHHHHHHHHHHHH
Confidence                      7888999999999999874

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-29  Score=214.57  Aligned_cols=172  Identities=26%  Similarity=0.266  Sum_probs=147.3

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +.+...+.+++++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.      +.++.++.+|++|.++++
T Consensus        32 ~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~------~~~~~~~~~Dl~d~~~v~  105 (293)
T PRK05866         32 PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA------GGDAMAVPCDLSDLDAVD  105 (293)
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHH
Confidence            33445678999999999999999999999999999999999998888777776542      236788999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKF--SKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~--~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      ++++++.+.+|++|++|||||.....++.+.  +.++++.++++|+.|++.++++++|.|++++.|+||++||.++..+.
T Consensus       106 ~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  185 (293)
T PRK05866        106 ALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA  185 (293)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC
Confidence            9999999999999999999998766655543  45788999999999999999999999998888999999997654421


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    .+....|++||+|+++|++.
T Consensus       186 --------------~p~~~~Y~asKaal~~l~~~  205 (293)
T PRK05866        186 --------------SPLFSVYNASKAALSAVSRV  205 (293)
T ss_pred             --------------CCCcchHHHHHHHHHHHHHH
Confidence                          16778899999999999864

>PRK05717 oxidoreductase; Validated

Probab=99.97  E-value=2.6e-29  Score=210.96  Aligned_cols=166  Identities=25%  Similarity=0.249  Sum_probs=144.9

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .+.+.++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++         ..++.++.+|+++.+++++
T Consensus         3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~   73 (255)
T PRK05717          3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---------GENAWFIAMDVADEAQVAA   73 (255)
T ss_pred             CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---------CCceEEEEccCCCHHHHHH
Confidence            3556788999999999999999999999999999999999877665543332         1357889999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSI--GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++++.+++|++|++|||||....  .++.+.+.+++++.+++|+.+++.++++++|+|.+. .|+||++||..+..+. 
T Consensus        74 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~-  151 (255)
T PRK05717         74 GVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSE-  151 (255)
T ss_pred             HHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCC-
Confidence            999999999999999999998643  456778999999999999999999999999999765 4899999999988776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    +....|++||+|+++|++.
T Consensus       152 --------------~~~~~Y~~sKaa~~~~~~~  170 (255)
T PRK05717        152 --------------PDTEAYAASKGGLLALTHA  170 (255)
T ss_pred             --------------CCCcchHHHHHHHHHHHHH
Confidence                          7788999999999999874

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.3e-29  Score=208.11  Aligned_cols=167  Identities=23%  Similarity=0.258  Sum_probs=149.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.      +.++..+++|+++.++++++++
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   77 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA------GGKAEALACHIGEMEQIDALFA   77 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHHH
Confidence            4678899999999999999999999999999999999988888777776542      1357789999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|++++.|+|+++||..+..+.     
T Consensus        78 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----  152 (252)
T PRK07035         78 HIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG-----  152 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC-----
Confidence            99999999999999999642 356678899999999999999999999999999998888999999999888776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+++++|+++
T Consensus       153 ----------~~~~~Y~~sK~al~~~~~~  171 (252)
T PRK07035        153 ----------DFQGIYSITKAAVISMTKA  171 (252)
T ss_pred             ----------CCCcchHHHHHHHHHHHHH
Confidence                      7888999999999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.97  E-value=5.2e-29  Score=211.66  Aligned_cols=166  Identities=22%  Similarity=0.324  Sum_probs=148.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.      +.++.++.+|+++.+++++++++
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~   80 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA------GGEALAVKADVLDKESLEQARQQ   80 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999999988877777776541      13688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCC---------------CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEc
Q 025705          142 WNGRLGPLHVLINNAGIFSI---------------GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVN  206 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~---------------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vs  206 (249)
                      +.++++++|++|||||....               .++.+.+.+++++.+++|+.+++.++++++|.|.+++.|+||++|
T Consensus        81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~is  160 (278)
T PRK08277         81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINIS  160 (278)
T ss_pred             HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence            99999999999999996532               235677889999999999999999999999999988789999999


Q ss_pred             CCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          207 SVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       207 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      |..++.+.               ++...|++||+|+++|+|.
T Consensus       161 S~~~~~~~---------------~~~~~Y~~sK~a~~~l~~~  187 (278)
T PRK08277        161 SMNAFTPL---------------TKVPAYSAAKAAISNFTQW  187 (278)
T ss_pred             cchhcCCC---------------CCCchhHHHHHHHHHHHHH
Confidence            99998877               7888999999999999874

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.3e-29  Score=211.71  Aligned_cols=160  Identities=16%  Similarity=0.185  Sum_probs=133.4

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           62 PVNDLTCIVTGS--TSGIGREIARQLAESGAHVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        62 ~~~~~~vlItGa--s~gIG~~ia~~l~~~G~~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.  +.+++.    .+...     .++.++.+|++|++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~----~~~~~-----~~~~~~~~Dv~~~~~i~~   74 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERI----AKRLP-----EPAPVLELDVTNEEHLAS   74 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHH----HHhcC-----CCCcEEeCCCCCHHHHHH
Confidence            467899999999  89999999999999999999999864  223333    22221     246788999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +++++.+.+|++|++|||||+...    .++.+.+.+++++++++|+.+++.++++++|+|++  +|+||++++.. ..+
T Consensus        75 ~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~  151 (256)
T PRK07889         75 LADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVA  151 (256)
T ss_pred             HHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-ccc
Confidence            999999999999999999998642    35667788999999999999999999999999974  47999998753 333


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               +.+..|++||+|+++|+|.
T Consensus       152 ~---------------~~~~~Y~asKaal~~l~~~  171 (256)
T PRK07889        152 W---------------PAYDWMGVAKAALESTNRY  171 (256)
T ss_pred             C---------------CccchhHHHHHHHHHHHHH
Confidence            3               6778899999999999874

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-29  Score=209.93  Aligned_cols=162  Identities=22%  Similarity=0.281  Sum_probs=142.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++++||||++|||++++++|+++|++|++++|+.+++++..+++..    .   .++.++.+|++|.+++.++++++.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~---~~~~~~~~Dl~~~~~i~~~~~~~~~   74 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK----A---ARVSVYAADVRDADALAAAAADFIA   74 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc----C---CeeEEEEcCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999998877665544422    1   1688999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCC-CCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQK-FSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +++++|++|||||........+ .+.+++++++++|+.+++.+++.++|.|++++.|+||++||.++..+.         
T Consensus        75 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~---------  145 (257)
T PRK07024         75 AHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL---------  145 (257)
T ss_pred             hCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---------
Confidence            9999999999999865433333 688999999999999999999999999998888999999999998887         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            +....|++||+++++|++.
T Consensus       146 ------~~~~~Y~asK~a~~~~~~~  164 (257)
T PRK07024        146 ------PGAGAYSASKAAAIKYLES  164 (257)
T ss_pred             ------CCCcchHHHHHHHHHHHHH
Confidence                  7888999999999999853

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7.2e-29  Score=213.95  Aligned_cols=167  Identities=23%  Similarity=0.243  Sum_probs=146.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..+++||+++||||++|||+++|++|+++|++|++.+++. +..++..+++...      +.++.++.+|++|.++++++
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~------g~~~~~~~~Dv~d~~~~~~~   80 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA------GAKAVAVAGDISQRATADEL   80 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc------CCeEEEEeCCCCCHHHHHHH
Confidence            3568899999999999999999999999999999998753 4566666666541      24788999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-------CCCeEEEEcCCccc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-------SPSRIINVNSVMHY  211 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-------~~g~Iv~vsS~~~~  211 (249)
                      ++++.+ +|++|++|||||+.....+.+.+.+++++.+++|+.+++.++++++|+|+++       ..|+||++||.++.
T Consensus        81 ~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  159 (306)
T PRK07792         81 VATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL  159 (306)
T ss_pred             HHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc
Confidence            999998 8999999999999877777888999999999999999999999999999753       14799999999988


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+.               ++...|++||+|+++|++.
T Consensus       160 ~~~---------------~~~~~Y~asKaal~~l~~~  181 (306)
T PRK07792        160 VGP---------------VGQANYGAAKAGITALTLS  181 (306)
T ss_pred             cCC---------------CCCchHHHHHHHHHHHHHH
Confidence            776               7888999999999999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.1e-29  Score=207.23  Aligned_cols=163  Identities=28%  Similarity=0.361  Sum_probs=139.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE-cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~-r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++|+++||||++|||+++|++|+++|++|++.+ |+.+..++...++...      +.++..+.+|+++.++++.++++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   75 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN------GGSAFSIGANLESLHGVEALYSS   75 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc------CCceEEEecccCCHHHHHHHHHH
Confidence            3579999999999999999999999999999875 5666666666666542      13577889999999999998888


Q ss_pred             Hhc----cCC--CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          142 WNG----RLG--PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       142 ~~~----~~g--~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +.+    .++  ++|++|||||+....++.+.+.++|++++++|+.+++.++++++|.|.++  |+||++||.++..+. 
T Consensus        76 ~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~-  152 (252)
T PRK12747         76 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISL-  152 (252)
T ss_pred             HHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCC-
Confidence            765    234  89999999998766677888999999999999999999999999999763  799999999988776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|+|.
T Consensus       153 --------------~~~~~Y~~sKaa~~~~~~~  171 (252)
T PRK12747        153 --------------PDFIAYSMTKGAINTMTFT  171 (252)
T ss_pred             --------------CCchhHHHHHHHHHHHHHH
Confidence                          7788999999999999874

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-28  Score=207.71  Aligned_cols=169  Identities=23%  Similarity=0.238  Sum_probs=150.2

Q ss_pred             CCCCCCEEEEeCCCC-chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTS-GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~-gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..+++|+++||||++ |||+++|+.|+++|++|++++|+.+++++..+++.+....    .++.++.+|+++.+++++++
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~   88 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL----GRVEAVVCDVTSEAQVDALI   88 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCC----ceEEEEEccCCCHHHHHHHH
Confidence            346789999999985 9999999999999999999999998888877777653321    36788999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+.+|++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||+++|..+..+.    
T Consensus        89 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----  164 (262)
T PRK07831         89 DAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ----  164 (262)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----
Confidence            99998889999999999987667788889999999999999999999999999998876 7999999999887776    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       165 -----------~~~~~Y~~sKaal~~~~~~  183 (262)
T PRK07831        165 -----------HGQAHYAAAKAGVMALTRC  183 (262)
T ss_pred             -----------CCCcchHHHHHHHHHHHHH
Confidence                       7888999999999999874

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-29  Score=210.48  Aligned_cols=162  Identities=23%  Similarity=0.254  Sum_probs=140.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.+++++++++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~   73 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG---------DHVLVVEGDVTSYADNQRAVDQ   73 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CcceEEEccCCCHHHHHHHHHH
Confidence            3678999999999999999999999999999999999877765544331         2578889999999999999999


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHH----HHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDG----YEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~----~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +.+.++++|++|||||+.. ..++.+.+.++    |++++++|+.+++.++++++|.|.++ .|+||++||..++.+.  
T Consensus        74 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~--  150 (263)
T PRK06200         74 TVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPG--  150 (263)
T ss_pred             HHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCC--
Confidence            9999999999999999754 34555666655    89999999999999999999998765 4899999999988776  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+++
T Consensus       151 -------------~~~~~Y~~sK~a~~~~~~~  169 (263)
T PRK06200        151 -------------GGGPLYTASKHAVVGLVRQ  169 (263)
T ss_pred             -------------CCCchhHHHHHHHHHHHHH
Confidence                         7788999999999999874

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.9e-29  Score=207.04  Aligned_cols=166  Identities=26%  Similarity=0.257  Sum_probs=148.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|+++.+++++++++
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~   77 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA------GGEALFVACDVTRDAEVKALVEQ   77 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999998887777666542      24688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.+|++|++|||||.... .++.+.+.+++++++++|+.+++.++++++|+|.+++.|+||++||..+..+.      
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~------  151 (253)
T PRK06172         78 TIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA------  151 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC------
Confidence            99999999999999998643 34678899999999999999999999999999988878999999999988877      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|++.
T Consensus       152 ---------~~~~~Y~~sKaa~~~~~~~  170 (253)
T PRK06172        152 ---------PKMSIYAASKHAVIGLTKS  170 (253)
T ss_pred             ---------CCCchhHHHHHHHHHHHHH
Confidence                     7888999999999999874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=7.6e-29  Score=208.12  Aligned_cols=162  Identities=22%  Similarity=0.320  Sum_probs=139.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++++.+..   .+++.+        .++.++.+|++|++++++++++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~--------~~~~~~~~Dl~~~~~~~~~~~~   72 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE--------KGVFTIKCDVGNRDQVKKSKEV   72 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh--------CCCeEEEecCCCHHHHHHHHHH
Confidence            35789999999999999999999999999999887765432   223322        1367889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..++.+..      
T Consensus        73 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~------  146 (255)
T PRK06463         73 VEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA------  146 (255)
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC------
Confidence            99999999999999998766677888999999999999999999999999999977789999999988764321      


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       147 --------~~~~~Y~asKaa~~~~~~~  165 (255)
T PRK06463        147 --------EGTTFYAITKAGIIILTRR  165 (255)
T ss_pred             --------CCccHhHHHHHHHHHHHHH
Confidence                    5677899999999999874

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.8e-29  Score=214.00  Aligned_cols=183  Identities=32%  Similarity=0.477  Sum_probs=151.1

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +..++++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..+    ..++.++.+|++|.++++
T Consensus         8 ~~~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dl~d~~~v~   83 (306)
T PRK06197          8 AADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP----GADVTLQELDLTSLASVR   83 (306)
T ss_pred             ccccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC----CCceEEEECCCCCHHHHH
Confidence            3456788999999999999999999999999999999999999888777777664321    136888999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc-CCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV-GFV  215 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~-~~~  215 (249)
                      ++++++.++++++|++|||||....  ..+.+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+.. +..
T Consensus        84 ~~~~~~~~~~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~  161 (306)
T PRK06197         84 AAADALRAAYPRIDLLINNAGVMYT--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAI  161 (306)
T ss_pred             HHHHHHHhhCCCCCEEEECCccccC--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCC
Confidence            9999999999999999999997643  2456778899999999999999999999999987778999999987654 222


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..++..   ...++++...|++||+|+++|++.
T Consensus       162 ~~~~~~---~~~~~~~~~~Y~~SK~a~~~~~~~  191 (306)
T PRK06197        162 HFDDLQ---WERRYNRVAAYGQSKLANLLFTYE  191 (306)
T ss_pred             CccccC---cccCCCcHHHHHHHHHHHHHHHHH
Confidence            222222   123346678899999999999874

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.2e-29  Score=211.37  Aligned_cols=158  Identities=23%  Similarity=0.297  Sum_probs=141.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+|+++||||++|||+++|++|+++|++|++++|+++.+++..    +        ..+.++.+|++|.++++++++++.
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~--------~~~~~~~~Dl~d~~~~~~~~~~~~   70 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----A--------EGLEAFQLDYAEPESIAALVAQVL   70 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----H--------CCceEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999987665432    2        136788999999999999999987


Q ss_pred             ccC-CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          144 GRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       144 ~~~-g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      +.+ +++|++|||||....+++.+.+.++++.++++|+.|++.+++.++|.|.+++.|+||++||..+..+.        
T Consensus        71 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~--------  142 (277)
T PRK05993         71 ELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPM--------  142 (277)
T ss_pred             HHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCC--------
Confidence            665 68999999999988788888999999999999999999999999999999888999999999888776        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|++||+|+++|++.
T Consensus       143 -------~~~~~Y~asK~a~~~~~~~  161 (277)
T PRK05993        143 -------KYRGAYNASKFAIEGLSLT  161 (277)
T ss_pred             -------CccchHHHHHHHHHHHHHH
Confidence                   7888999999999999863

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=9.2e-29  Score=208.15  Aligned_cols=160  Identities=23%  Similarity=0.284  Sum_probs=142.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||++|||+++|++|+++|++|++++|+++.+++..+++.+.       .++.++.+|++|.++++++++++.+.+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~Dv~d~~~~~~~~~~~~~~~   74 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-------GEVYAVKADLSDKDDLKNLVKEAWELL   74 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-------CCceEEEcCCCCHHHHHHHHHHHHHhc
Confidence            5899999999999999999999999999999998888887777542       257789999999999999999999999


Q ss_pred             CCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc-CCCCeEEEEcCCccccCCCCccccccc
Q 025705          147 GPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-GSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       147 g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +++|++|||||...  ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+ +++|+||++||.++..+.         
T Consensus        75 g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~---------  145 (259)
T PRK08340         75 GGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM---------  145 (259)
T ss_pred             CCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC---------
Confidence            99999999999753  345677888999999999999999999999999874 567999999999887766         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|++||+|+.+|+|.
T Consensus       146 ------~~~~~y~~sKaa~~~~~~~  164 (259)
T PRK08340        146 ------PPLVLADVTRAGLVQLAKG  164 (259)
T ss_pred             ------CCchHHHHHHHHHHHHHHH
Confidence                  7888999999999999874

>PRK06182 short chain dehydrogenase; Validated

Probab=99.96  E-value=7.2e-29  Score=210.35  Aligned_cols=157  Identities=28%  Similarity=0.372  Sum_probs=141.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++++||||++|||+++|++|+++|++|++++|+.+++++..    .        ..+.++.+|++|.++++++++++.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--------~~~~~~~~Dv~~~~~~~~~~~~~~   69 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--------LGVHPLSLDVTDEASIKAAVDTII   69 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--------CCCeEEEeeCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999987664432    1        146788999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.++++|++|||||....+++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.         
T Consensus        70 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~---------  140 (273)
T PRK06182         70 AEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT---------  140 (273)
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC---------
Confidence            99999999999999987788889999999999999999999999999999998888999999998877665         


Q ss_pred             cccccCCCcccchhhHHHHHhhhh
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                            +....|++||+|+++|++
T Consensus       141 ------~~~~~Y~~sKaa~~~~~~  158 (273)
T PRK06182        141 ------PLGAWYHATKFALEGFSD  158 (273)
T ss_pred             ------CCccHhHHHHHHHHHHHH
Confidence                  677789999999999876

>PRK05855 short chain dehydrogenase; Validated

Probab=99.96  E-value=8.9e-29  Score=229.75  Aligned_cols=168  Identities=27%  Similarity=0.294  Sum_probs=152.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ...+.+++++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~~~~~~  383 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA------GAVAHAYRVDVSDADAMEAFA  383 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHH
Confidence            44567899999999999999999999999999999999998888887777542      136889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+.+|++|++|||||+...+++.+.+.+++++++++|+.|++.++++++|.|.+++ .|+||++||.+++.+.    
T Consensus       384 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----  459 (582)
T PRK05855        384 EWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS----  459 (582)
T ss_pred             HHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC----
Confidence            99999999999999999998777888999999999999999999999999999999875 5899999999998887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       460 -----------~~~~~Y~~sKaa~~~~~~~  478 (582)
T PRK05855        460 -----------RSLPAYATSKAAVLMLSEC  478 (582)
T ss_pred             -----------CCCcHHHHHHHHHHHHHHH
Confidence                       7889999999999999864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-28  Score=205.85  Aligned_cols=168  Identities=26%  Similarity=0.313  Sum_probs=152.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++++.      +.++.++.+|+++++++.+++
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~   79 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA------GGAAEALAFDIADEEAVAAAF   79 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHH
Confidence            45688999999999999999999999999999999999988887777766541      136789999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.+++.|+||++||..+..+.     
T Consensus        80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----  154 (256)
T PRK06124         80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR-----  154 (256)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----
Confidence            999999999999999999877777888899999999999999999999999999988888999999999988776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|+|+.++++.
T Consensus       155 ----------~~~~~Y~~sK~a~~~~~~~  173 (256)
T PRK06124        155 ----------AGDAVYPAAKQGLTGLMRA  173 (256)
T ss_pred             ----------CCccHhHHHHHHHHHHHHH
Confidence                      7889999999999999874

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-28  Score=206.76  Aligned_cols=166  Identities=20%  Similarity=0.298  Sum_probs=149.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++||||++|||++++++|+++|++|++++|+.+++++..+++...      +.++.++.+|+++++++.+++++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~~   80 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA------GRRAHVVAADLAHPEATAGLAGQ   80 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHH
Confidence            477899999999999999999999999999999999988877777666541      13678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc-CCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-GSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|+|.+ .+.|+||++||..+..+.      
T Consensus        81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------  154 (263)
T PRK07814         81 AVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG------  154 (263)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC------
Confidence            9999999999999999876677788899999999999999999999999999987 467899999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||++++++++.
T Consensus       155 ---------~~~~~Y~~sK~a~~~~~~~  173 (263)
T PRK07814        155 ---------RGFAAYGTAKAALAHYTRL  173 (263)
T ss_pred             ---------CCCchhHHHHHHHHHHHHH
Confidence                     7888999999999999874

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-28  Score=207.35  Aligned_cols=166  Identities=20%  Similarity=0.245  Sum_probs=146.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++.+.      ..++.++.+|++++++++++++
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~i~~~~~   78 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA------GPEGLGVSADVRDYAAVEAAFA   78 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh------CCceEEEECCCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777666665542      1356888999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|.++ .|+||++||..+..+.      
T Consensus        79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~------  151 (264)
T PRK07576         79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPM------  151 (264)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCC------
Confidence            999888999999999997766677888999999999999999999999999999765 4899999999887766      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|++.
T Consensus       152 ---------~~~~~Y~asK~a~~~l~~~  170 (264)
T PRK07576        152 ---------PMQAHVCAAKAGVDMLTRT  170 (264)
T ss_pred             ---------CCccHHHHHHHHHHHHHHH
Confidence                     7888999999999999874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.96  E-value=1.1e-28  Score=204.72  Aligned_cols=158  Identities=22%  Similarity=0.269  Sum_probs=137.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||++|||+++|++|+++|++|++++|++++..   +++.+        ..+.++.+|++|.++++++++++.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~   70 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ--------AGAQCIQADFSTNAGIMAFIDELKQ   70 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH--------cCCEEEEcCCCCHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999876432   33322        1256789999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcCCccccCCCCcccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .++++|++|||||........+.+.++|++++++|+.+++.+++.++|.|.+++  .|+||++||..+..+.        
T Consensus        71 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~--------  142 (236)
T PRK06483         71 HTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS--------  142 (236)
T ss_pred             hCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC--------
Confidence            999999999999986555566778999999999999999999999999998765  6899999998877666        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             +....|++||+|+++|+|.
T Consensus       143 -------~~~~~Y~asKaal~~l~~~  161 (236)
T PRK06483        143 -------DKHIAYAASKAALDNMTLS  161 (236)
T ss_pred             -------CCCccHHHHHHHHHHHHHH
Confidence                   7788999999999999874

>PRK08643 acetoin reductase; Validated

Probab=99.96  E-value=2.1e-28  Score=205.43  Aligned_cols=163  Identities=24%  Similarity=0.274  Sum_probs=146.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++...++.+.      +.++.++.+|++++++++++++++.+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD------GGKAIAVKADVSDRDQVFAAVRQVVD   75 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999988877777766542      13678899999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +++++|++|||||.....++.+.+.+++++++++|+.+++.+++.+++.|++.+ .|+||++||..+..+.         
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  146 (256)
T PRK08643         76 TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN---------  146 (256)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC---------
Confidence            999999999999987667788889999999999999999999999999998754 4799999999888776         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|++||+++++|++.
T Consensus       147 ------~~~~~Y~~sK~a~~~~~~~  165 (256)
T PRK08643        147 ------PELAVYSSTKFAVRGLTQT  165 (256)
T ss_pred             ------CCCchhHHHHHHHHHHHHH
Confidence                  7788999999999998874

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-28  Score=206.04  Aligned_cols=166  Identities=22%  Similarity=0.305  Sum_probs=145.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+. +..++..+++...      +.++.++.+|++|.++++++++
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~i~~~~~   77 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA------GGEAIAVKGDVTVESDVVNLIQ   77 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHH
Confidence            47899999999999999999999999999999988854 4455555555431      2467889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++++|.+++ .|+||++||..+..+.     
T Consensus        78 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~-----  152 (261)
T PRK08936         78 TAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW-----  152 (261)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC-----
Confidence            9999999999999999987777788889999999999999999999999999998764 6899999998877776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|+|+++|++.
T Consensus       153 ----------~~~~~Y~~sKaa~~~~~~~  171 (261)
T PRK08936        153 ----------PLFVHYAASKGGVKLMTET  171 (261)
T ss_pred             ----------CCCcccHHHHHHHHHHHHH
Confidence                      7888999999999999874

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-28  Score=207.84  Aligned_cols=168  Identities=18%  Similarity=0.233  Sum_probs=143.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-------HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-------ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS  134 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  134 (249)
                      ++++|+++||||++|||.++|++|+++|++|++++|+.+.       +++..+++..    .  +.++.++.+|+++.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~----~--~~~~~~~~~D~~~~~~   76 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA----A--GGQALPLVGDVRDEDQ   76 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh----c--CCceEEEEecCCCHHH
Confidence            4678999999999999999999999999999999998653       3333344433    1  2468899999999999


Q ss_pred             HHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          135 VVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       135 v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      ++++++++.+.++++|++|||||.....+..+.+.+++++++++|+.+++.++++++|+|++++.|+||++||..+..+.
T Consensus        77 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  156 (273)
T PRK08278         77 VAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK  156 (273)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc
Confidence            99999999998999999999999877777888899999999999999999999999999998878999999997655432


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ..++...|++||+|+++|++.
T Consensus       157 -------------~~~~~~~Y~~sK~a~~~~~~~  177 (273)
T PRK08278        157 -------------WFAPHTAYTMAKYGMSLCTLG  177 (273)
T ss_pred             -------------ccCCcchhHHHHHHHHHHHHH
Confidence                         015678999999999999874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-28  Score=205.90  Aligned_cols=163  Identities=23%  Similarity=0.286  Sum_probs=139.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.. .++..+++...      +.++.++.+|+++.+++++++++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   77 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA------GGEALALTADLETYAGAQAAMAA   77 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc------CCeEEEEEEeCCCHHHHHHHHHH
Confidence            477899999999999999999999999999999999853 34444444331      24678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|+|.+++.|+||++||..+. +       
T Consensus        78 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~-------  149 (260)
T PRK12823         78 AVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR-G-------  149 (260)
T ss_pred             HHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc-C-------
Confidence            9999999999999999642 457788899999999999999999999999999998878999999998754 2       


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|++.
T Consensus       150 ---------~~~~~Y~~sK~a~~~~~~~  168 (260)
T PRK12823        150 ---------INRVPYSAAKGGVNALTAS  168 (260)
T ss_pred             ---------CCCCccHHHHHHHHHHHHH
Confidence                     3446799999999999874

>PRK06128 oxidoreductase; Provisional

Probab=99.96  E-value=1.8e-28  Score=210.82  Aligned_cols=165  Identities=25%  Similarity=0.323  Sum_probs=142.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH--HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK--AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..+++|++|||||++|||+++|++|+++|++|++++++.+  ..++..+++.+.      +.++.++.+|++|.++++++
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~  124 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE------GRKAVALPGDLKDEAFCRQL  124 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc------CCeEEEEecCCCCHHHHHHH
Confidence            3578899999999999999999999999999999887643  334444444331      24678899999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.++++|+||||||... ..++.+.+.+++++++++|+.+++.++++++|+|.+  .|+||++||..++.+.   
T Consensus       125 ~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~---  199 (300)
T PRK06128        125 VERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPS---  199 (300)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCC---
Confidence            9999999999999999999753 356778899999999999999999999999999975  3799999999988776   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       200 ------------~~~~~Y~asK~a~~~~~~~  218 (300)
T PRK06128        200 ------------PTLLDYASTKAAIVAFTKA  218 (300)
T ss_pred             ------------CCchhHHHHHHHHHHHHHH
Confidence                        7888899999999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.96  E-value=2.9e-28  Score=204.61  Aligned_cols=165  Identities=25%  Similarity=0.303  Sum_probs=146.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+..+...+++.+.      +.++.++.+|+++.++++++++.
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~i~~~~~~   81 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL------GGQAFACRCDITSEQELSALADF   81 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHH
Confidence            577999999999999999999999999999999999988887776666542      13678889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++ +.+.+++++.+++|+.+++.++++++|+|.+.+.|+||++||..+..+.       
T Consensus        82 ~~~~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  153 (255)
T PRK06113         82 ALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-------  153 (255)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-------
Confidence            99999999999999998654444 6788999999999999999999999999987777899999999988776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       154 --------~~~~~Y~~sK~a~~~~~~~  172 (255)
T PRK06113        154 --------INMTSYASSKAAASHLVRN  172 (255)
T ss_pred             --------CCcchhHHHHHHHHHHHHH
Confidence                    7788999999999999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-28  Score=206.55  Aligned_cols=163  Identities=25%  Similarity=0.323  Sum_probs=145.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+.+|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.         .++.++.+|++|.+++++++++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~   73 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---------PAAIAVSLDVTRQDSIDRIVAA   73 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---------CceEEEEccCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999999887766654432         2578889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++++|.+++ .|+||++||..+..+.      
T Consensus        74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  147 (257)
T PRK07067         74 AVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------  147 (257)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC------
Confidence            999999999999999987777788889999999999999999999999999998753 4799999999887776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+++++|+|.
T Consensus       148 ---------~~~~~Y~~sK~a~~~~~~~  166 (257)
T PRK07067        148 ---------ALVSHYCATKAAVISYTQS  166 (257)
T ss_pred             ---------CCCchhhhhHHHHHHHHHH
Confidence                     7889999999999999873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.96  E-value=1.9e-28  Score=204.63  Aligned_cols=164  Identities=25%  Similarity=0.395  Sum_probs=142.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||.++|++|+++|++|++++|+..  ++..+.+.+.      +.++..+.+|+++.+++.+++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   73 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL------GRRFLSLTADLSDIEAIKALVDS   73 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc------CCceEEEECCCCCHHHHHHHHHH
Confidence            468899999999999999999999999999999999752  3333333321      13688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|+|.+++ .|+||++||..++.+.      
T Consensus        74 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------  147 (248)
T TIGR01832        74 AVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG------  147 (248)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC------
Confidence            998889999999999987767777889999999999999999999999999998765 6899999999888766      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|++||+|+++|+|.
T Consensus       148 ---------~~~~~Y~~sKaa~~~~~~~  166 (248)
T TIGR01832       148 ---------IRVPSYTASKHGVAGLTKL  166 (248)
T ss_pred             ---------CCCchhHHHHHHHHHHHHH
Confidence                     6778899999999999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-28  Score=205.29  Aligned_cols=165  Identities=27%  Similarity=0.317  Sum_probs=147.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||+++||.++|++|+++|++|++++|+.+.+++..+++.....    ..++.++.+|+++.++++++++++.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   77 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG----EGMAYGFGADATSEQSVLALSRGVDE   77 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC----CceeEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999998888777776655321    13688999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      .++++|++|||||.....++.+.+.+++++.+++|+.+++.+.+++++.|++++ .|+||++||..+..+.         
T Consensus        78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---------  148 (259)
T PRK12384         78 IFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS---------  148 (259)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC---------
Confidence            999999999999988777788899999999999999999999999999998876 6899999998887776         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            +....|++||+|++++++.
T Consensus       149 ------~~~~~Y~~sKaa~~~l~~~  167 (259)
T PRK12384        149 ------KHNSGYSAAKFGGVGLTQS  167 (259)
T ss_pred             ------CCCchhHHHHHHHHHHHHH
Confidence                  6778899999999998764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2.3e-28  Score=204.25  Aligned_cols=165  Identities=21%  Similarity=0.232  Sum_probs=147.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEE-EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil-~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +.+++++||||++|||++++++|+++|++|++ .+|+.++.++..++++..      +.++.++.+|++|++++++++++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   75 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL------GRKALAVKANVGDVEKIKEMFAQ   75 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHHHH
Confidence            45789999999999999999999999999876 578887777777666542      24688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.+.++..+++|+.+++.++++++|.|++++.|+||++||..+..+.       
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  148 (250)
T PRK08063         76 IDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL-------  148 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-------
Confidence            9999999999999999877778888999999999999999999999999999998888999999998877665       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+++++|++.
T Consensus       149 --------~~~~~y~~sK~a~~~~~~~  167 (250)
T PRK08063        149 --------ENYTTVGVSKAALEALTRY  167 (250)
T ss_pred             --------CCccHHHHHHHHHHHHHHH
Confidence                    7788999999999999864

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-28  Score=208.89  Aligned_cols=156  Identities=29%  Similarity=0.369  Sum_probs=141.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++++||||+||||+++|++|+++|++|++++|++++.+..              .++.++.+|++|+++++++++.+.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--------------~~~~~~~~D~~d~~~~~~~~~~~~   68 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--------------PGVELLELDVTDDASVQAAVDEVI   68 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--------------CCCeeEEeecCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999987554211              257789999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.+|++|++|||||....+++.+.+.+++++++++|+.+++.+++.++|+|++++.|+||++||..+..+.         
T Consensus        69 ~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  139 (270)
T PRK06179         69 ARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA---------  139 (270)
T ss_pred             HhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC---------
Confidence            99999999999999987778888899999999999999999999999999999888999999999988876         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            +....|++||+++++|++.
T Consensus       140 ------~~~~~Y~~sK~a~~~~~~~  158 (270)
T PRK06179        140 ------PYMALYAASKHAVEGYSES  158 (270)
T ss_pred             ------CCccHHHHHHHHHHHHHHH
Confidence                  7888999999999998764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.96  E-value=8.7e-29  Score=208.65  Aligned_cols=162  Identities=23%  Similarity=0.278  Sum_probs=137.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+.    .     +.++..+.+|+++.+++++++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-----~~~~~~~~~D~~~~~~~~~~~~~   72 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-----GDAVVGVEGDVRSLDDHKEAVAR   72 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-----CCceEEEEeccCCHHHHHHHHHH
Confidence            35789999999999999999999999999999999998766554321    1     13678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCC-CCCCCCCH----HHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          142 WNGRLGPLHVLINNAGIFSI-GEPQKFSK----DGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~-~~~~~~~~----~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +.+.++++|++|||||+... .++.+.+.    ++|++++++|+.+++.++++++|.|.+++ |+||+++|..+..+.  
T Consensus        73 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~--  149 (262)
T TIGR03325        73 CVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPN--  149 (262)
T ss_pred             HHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCC--
Confidence            99999999999999997532 33444443    57999999999999999999999998754 899999999888776  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       150 -------------~~~~~Y~~sKaa~~~l~~~  168 (262)
T TIGR03325       150 -------------GGGPLYTAAKHAVVGLVKE  168 (262)
T ss_pred             -------------CCCchhHHHHHHHHHHHHH
Confidence                         6778899999999999874

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07985 oxidoreductase; Provisional

Probab=99.96  E-value=2.4e-28  Score=209.54  Aligned_cols=164  Identities=23%  Similarity=0.285  Sum_probs=140.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.  +..++..+.+.+    .  +.++.++.+|++|.+++.+++
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~Dl~~~~~~~~~~  119 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE----C--GRKAVLLPGDLSDEKFARSLV  119 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH----c--CCeEEEEEccCCCHHHHHHHH
Confidence            57889999999999999999999999999999988753  334444333322    1  236788999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||..++.+.    
T Consensus       120 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~----  193 (294)
T PRK07985        120 HEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPS----  193 (294)
T ss_pred             HHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCC----
Confidence            999999999999999999753 356778899999999999999999999999999965  3799999999988776    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +....|++||+|+++|++.
T Consensus       194 -----------~~~~~Y~asKaal~~l~~~  212 (294)
T PRK07985        194 -----------PHLLDYAATKAAILNYSRG  212 (294)
T ss_pred             -----------CCcchhHHHHHHHHHHHHH
Confidence                       7888999999999999874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=3.1e-28  Score=202.61  Aligned_cols=163  Identities=25%  Similarity=0.283  Sum_probs=153.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++|||+|+|||+++|.++..+|++|-++.|+.+++++.++++.-....    .+|.+..+|++|-+++..+++++.+.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~----~~v~~~S~d~~~Y~~v~~~~~~l~~~  109 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV----EDVSYKSVDVIDYDSVSKVIEELRDL  109 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc----ceeeEeccccccHHHHHHHHhhhhhc
Confidence            89999999999999999999999999999999999999999988775432    24789999999999999999999999


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      .+++|.+|+|||...++.+.+.+.++++..+++|++++++++++.++.|+++. .|+|+.+||.++..+.          
T Consensus       110 ~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i----------  179 (331)
T KOG1210|consen  110 EGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGI----------  179 (331)
T ss_pred             cCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCc----------
Confidence            99999999999999999999999999999999999999999999999999876 6899999999999999          


Q ss_pred             ccccCCCcccchhhHHHHHhhhh
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                           +++++|+++|+|+.+|+.
T Consensus       180 -----~GysaYs~sK~alrgLa~  197 (331)
T KOG1210|consen  180 -----YGYSAYSPSKFALRGLAE  197 (331)
T ss_pred             -----ccccccccHHHHHHHHHH
Confidence                 999999999999999975

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-28  Score=206.63  Aligned_cols=162  Identities=22%  Similarity=0.312  Sum_probs=147.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||++|||++++++|+++|++|++++|+.+++++..+++...      +.++.++.+|+++.++++++++++.+.
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~~i~~~   74 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA------GGDGFYQRCDVRDYSQLTALAQACEEK   74 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999998888887777652      246788999999999999999999998


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      ++++|++|||||....+.+.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.           
T Consensus        75 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------  143 (270)
T PRK05650         75 WGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG-----------  143 (270)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC-----------
Confidence            899999999999987778888999999999999999999999999999998878999999999988877           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ++...|+++|+|+++|++.
T Consensus       144 ----~~~~~Y~~sKaa~~~~~~~  162 (270)
T PRK05650        144 ----PAMSSYNVAKAGVVALSET  162 (270)
T ss_pred             ----CCchHHHHHHHHHHHHHHH
Confidence                7889999999999998863

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-28  Score=208.22  Aligned_cols=161  Identities=24%  Similarity=0.344  Sum_probs=143.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+++++||||+||||++++++|+++|++|++++|+.++++...+.    .     ..++..+.+|++|.+++.++++++.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-----~~~~~~~~~D~~d~~~~~~~~~~~~   73 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-----PDRALARLLDVTDFDAIDAVVADAE   73 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-----CCCeeEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998766544322    1     1357888999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.++++|++|||||....++..+.+.+++++++++|+.+++.++++++|+|++++.|+||++||.++..+.         
T Consensus        74 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~---------  144 (277)
T PRK06180         74 ATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM---------  144 (277)
T ss_pred             HHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC---------
Confidence            98999999999999887778888999999999999999999999999999998888999999999988876         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|+++|++++++++.
T Consensus       145 ------~~~~~Y~~sK~a~~~~~~~  163 (277)
T PRK06180        145 ------PGIGYYCGSKFALEGISES  163 (277)
T ss_pred             ------CCcchhHHHHHHHHHHHHH
Confidence                  7889999999999998763

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=1.3e-28  Score=226.66  Aligned_cols=161  Identities=22%  Similarity=0.282  Sum_probs=143.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ...||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++..+.+|++|++++++++++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~  336 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG---------DEHLSVQADITDEAAVESAFAQ  336 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CceeEEEccCCCHHHHHHHHHH
Confidence            3478999999999999999999999999999999999887776654431         2567789999999999999999


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.+|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|  ++.|+||++||.++..+.      
T Consensus       337 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~------  408 (520)
T PRK06484        337 IQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLAL------  408 (520)
T ss_pred             HHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCC------
Confidence            9999999999999999863 3567788999999999999999999999999999  345899999999998887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       409 ---------~~~~~Y~asKaal~~l~~~  427 (520)
T PRK06484        409 ---------PPRNAYCASKAAVTMLSRS  427 (520)
T ss_pred             ---------CCCchhHHHHHHHHHHHHH
Confidence                     7889999999999999874

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.5e-28  Score=204.54  Aligned_cols=163  Identities=19%  Similarity=0.290  Sum_probs=144.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++|||+++|||+++|++|+++|++|++++|+++++++..+++.+..     ..++.++.+|++|.+++++++++
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   78 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-----GVDVAVHALDLSSPEAREQLAAE   78 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-----CCceEEEEecCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988887777776532     13678899999999999888765


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                          ++++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+..+.       
T Consensus        79 ----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  147 (259)
T PRK06125         79 ----AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPD-------  147 (259)
T ss_pred             ----hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCC-------
Confidence                478999999999876678889999999999999999999999999999998877999999999887665       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              +.+..|+++|+|+++|+|.
T Consensus       148 --------~~~~~y~ask~al~~~~~~  166 (259)
T PRK06125        148 --------ADYICGSAGNAALMAFTRA  166 (259)
T ss_pred             --------CCchHhHHHHHHHHHHHHH
Confidence                    6788899999999999874

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.96  E-value=5.7e-28  Score=209.09  Aligned_cols=178  Identities=29%  Similarity=0.422  Sum_probs=142.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.+++++..+++..      ...++.++.+|++|.++++++++++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~------~~~~~~~~~~Dl~~~~~v~~~~~~~   75 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM------PKDSYTIMHLDLGSLDSVRQFVQQF   75 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            46899999999999999999999999 9999999998887776665532      1236788899999999999999999


Q ss_pred             hccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcCCccccCCC----
Q 025705          143 NGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNSVMHYVGFV----  215 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS~~~~~~~~----  215 (249)
                      .+.++++|++|||||+... .+..+.+.+++++++++|+.+++.+++.++|.|++++  .|+||++||.++..+..    
T Consensus        76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~  155 (314)
T TIGR01289        76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNV  155 (314)
T ss_pred             HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcC
Confidence            8888999999999997542 2334678899999999999999999999999998763  58999999998764321    


Q ss_pred             ----Ccccccc----------ccccccCCCcccchhhHHHHHhhhh
Q 025705          216 ----DTEDMNV----------VSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       216 ----~~~~~~~----------~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                          ...++..          ....+.+.+...|++||+|+..+++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  201 (314)
T TIGR01289       156 PPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVR  201 (314)
T ss_pred             CCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHH
Confidence                0111110          0112344667889999999888775

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06196 oxidoreductase; Provisional

Probab=99.96  E-value=3.6e-28  Score=210.39  Aligned_cols=172  Identities=33%  Similarity=0.510  Sum_probs=143.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.          ++.++.+|++|.++++++++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----------~v~~~~~Dl~d~~~v~~~~~   91 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----------GVEVVMLDLADLESVRAFAE   91 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----------hCeEEEccCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999999887776665542          26788999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|+||||||....  ..+.+.++++..+++|+.+++.+++.++|.|.+++.++||++||..+..+...++++
T Consensus        92 ~~~~~~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~  169 (315)
T PRK06196         92 RFLDSGRRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDP  169 (315)
T ss_pred             HHHhcCCCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcccc
Confidence            999988999999999997542  345577889999999999999999999999998877899999998765443333322


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhh
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      +.   ..++++...|++||+|++.|++
T Consensus       170 ~~---~~~~~~~~~Y~~SK~a~~~~~~  193 (315)
T PRK06196        170 HF---TRGYDKWLAYGQSKTANALFAV  193 (315)
T ss_pred             Cc---cCCCChHHHHHHHHHHHHHHHH
Confidence            21   2344667889999999999876

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.7e-28  Score=206.24  Aligned_cols=161  Identities=21%  Similarity=0.304  Sum_probs=144.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+|+++||||++|||++++++|+++|++|++++|+++.+++..+++.         .++.++.+|++|+++++++++++.
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~   72 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG---------DRLLPLALDVTDRAAVFAAVETAV   72 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc---------CCeeEEEccCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999877665543321         257788999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.++++|++|||||....+++.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||..++.+.         
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------  143 (275)
T PRK08263         73 EHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF---------  143 (275)
T ss_pred             HHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC---------
Confidence            98999999999999988788889999999999999999999999999999998878899999999988877         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|++||++++++++.
T Consensus       144 ------~~~~~Y~~sKaa~~~~~~~  162 (275)
T PRK08263        144 ------PMSGIYHASKWALEGMSEA  162 (275)
T ss_pred             ------CCccHHHHHHHHHHHHHHH
Confidence                  7788999999999988763

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.3e-28  Score=202.73  Aligned_cols=164  Identities=23%  Similarity=0.328  Sum_probs=144.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++++|+++||||++|||.++|++|+++|++|++++|+.+.. +...++..        .++..+.+|+++.++++++++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~   81 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLG--------GNAKGLVCDVSDSQSVEAAVA   81 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhC--------CceEEEEecCCCHHHHHHHHH
Confidence            457899999999999999999999999999999999987542 22222211        356789999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.      
T Consensus        82 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  155 (255)
T PRK06841         82 AVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL------  155 (255)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC------
Confidence            99998999999999999876667778899999999999999999999999999998878999999999888777      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|++||+|++++++.
T Consensus       156 ---------~~~~~Y~~sK~a~~~~~~~  174 (255)
T PRK06841        156 ---------ERHVAYCASKAGVVGMTKV  174 (255)
T ss_pred             ---------CCCchHHHHHHHHHHHHHH
Confidence                     7888999999999999874

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=9.3e-29  Score=194.89  Aligned_cols=157  Identities=25%  Similarity=0.277  Sum_probs=139.3

Q ss_pred             CCEEEEeCCC-CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGST-SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas-~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|.|+|||++ ||||.++|++|++.|+.|+.++|+.+.......+           ..+.....|+++++++.++..++.
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-----------~gl~~~kLDV~~~~~V~~v~~evr   75 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-----------FGLKPYKLDVSKPEEVVTVSGEVR   75 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-----------hCCeeEEeccCChHHHHHHHHHHh
Confidence            4789999976 7999999999999999999999998776554322           257888999999999999999998


Q ss_pred             c-cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          144 G-RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       144 ~-~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      + .+|.+|+|+||||..-..|..|.+.+..++.|++|++|++.++|++... .-+.+|.|||++|..++.+.        
T Consensus        76 ~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~-likaKGtIVnvgSl~~~vpf--------  146 (289)
T KOG1209|consen   76 ANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHF-LIKAKGTIVNVGSLAGVVPF--------  146 (289)
T ss_pred             hCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHH-HHHccceEEEecceeEEecc--------
Confidence            8 7899999999999987788899999999999999999999999999854 44456999999999999998        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             |..+.|+|||||+.++++.
T Consensus       147 -------pf~~iYsAsKAAihay~~t  165 (289)
T KOG1209|consen  147 -------PFGSIYSASKAAIHAYART  165 (289)
T ss_pred             -------chhhhhhHHHHHHHHhhhh
Confidence                   9999999999999998863

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.5e-28  Score=200.39  Aligned_cols=165  Identities=20%  Similarity=0.257  Sum_probs=147.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||++|||++++++|+++|++|++++|+++++++..+++.+..+    +.++.++.+|+++.++++++++++.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP----GIKVAVAALDVNDHDQVFEVFAEFRD   77 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC----CceEEEEEcCCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999888877776665322    24789999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      .++++|++|||||+....++.+.+.+.+++.+++|+.+++.++++++|.|++.+.++||++||..+..+.          
T Consensus        78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  147 (248)
T PRK08251         78 ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----------  147 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----------
Confidence            9999999999999987777777888999999999999999999999999998888899999999888776          


Q ss_pred             ccccCC-CcccchhhHHHHHhhhhc
Q 025705          225 GRRKYT-SLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~-~~~~Y~asKaal~~l~~~  248 (249)
                           + +...|++||++++++++.
T Consensus       148 -----~~~~~~Y~~sK~a~~~~~~~  167 (248)
T PRK08251        148 -----PGVKAAYAASKAGVASLGEG  167 (248)
T ss_pred             -----CCCcccHHHHHHHHHHHHHH
Confidence                 4 367899999999998763

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.96  E-value=6.7e-28  Score=201.08  Aligned_cols=165  Identities=22%  Similarity=0.248  Sum_probs=143.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++|+++||||++|||+++|++|+++|++|++. +++.+..++..+++...      +.++..+.+|++|.+++++++++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   74 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL------GFDFIASEGNVGDWDSTKAAFDK   74 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            467999999999999999999999999998885 44555555555555431      24678889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|.+++.|+||++||..+..+.       
T Consensus        75 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  147 (246)
T PRK12938         75 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-------  147 (246)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC-------
Confidence            9999999999999999876667788899999999999999999999999999998878899999999888776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+++|+|+++|++.
T Consensus       148 --------~~~~~y~~sK~a~~~~~~~  166 (246)
T PRK12938        148 --------FGQTNYSTAKAGIHGFTMS  166 (246)
T ss_pred             --------CCChhHHHHHHHHHHHHHH
Confidence                    7888999999999998763

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.3e-28  Score=201.78  Aligned_cols=164  Identities=21%  Similarity=0.249  Sum_probs=145.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...      +.++.++.+|++|.++++++++++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~   76 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL------GRRALAVPTDITDEDQCANLVALA   76 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh------CCceEEEecCCCCHHHHHHHHHHH
Confidence            56799999999999999999999999999999999988877776666542      136789999999999999999999


Q ss_pred             hccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          143 NGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .++++++|++|||||.... .++.+.+.+++++++++|+.+++.+++++.+.|.+++ |+||++||..+..+.       
T Consensus        77 ~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~-------  148 (258)
T PRK07890         77 LERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQ-------  148 (258)
T ss_pred             HHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCC-------
Confidence            9999999999999997543 5667788999999999999999999999999997754 799999999887766       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+++|+++++++++
T Consensus       149 --------~~~~~Y~~sK~a~~~l~~~  167 (258)
T PRK07890        149 --------PKYGAYKMAKGALLAASQS  167 (258)
T ss_pred             --------CCcchhHHHHHHHHHHHHH
Confidence                    7888999999999999874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=3.6e-28  Score=223.67  Aligned_cols=162  Identities=25%  Similarity=0.344  Sum_probs=144.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|+++++++++++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~   73 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG---------PDHHALAMDVSDEAQIREGFEQL   73 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CceeEEEeccCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999999888776655441         35678999999999999999999


Q ss_pred             hccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCC-eEEEEcCCccccCCCCccc
Q 025705          143 NGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPS-RIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       143 ~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g-~Iv~vsS~~~~~~~~~~~~  219 (249)
                      .+.++++|+||||||+..  ..++.+.+.++|++++++|+.+++.++++++|+|++++.| +||++||..+..+.     
T Consensus        74 ~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-----  148 (520)
T PRK06484         74 HREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-----  148 (520)
T ss_pred             HHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-----
Confidence            999999999999999843  3466788999999999999999999999999999876655 99999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|+|+.+|++.
T Consensus       149 ----------~~~~~Y~asKaal~~l~~~  167 (520)
T PRK06484        149 ----------PKRTAYSASKAAVISLTRS  167 (520)
T ss_pred             ----------CCCchHHHHHHHHHHHHHH
Confidence                      7888999999999999874

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.2e-28  Score=202.25  Aligned_cols=158  Identities=27%  Similarity=0.281  Sum_probs=140.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.      +  .      ...++.++.+|+++.+++++++++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~------~~~~~~~~~~D~~~~~~~~~~~~~   68 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V------DGRPAEFHAADVRDPDQVAALVDA   68 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h------cCCceEEEEccCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999998654      0  0      013678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||||.....++.+.+.+.+++.+++|+.+++.+++++.|.|.++ +.|+||++||..+..+.      
T Consensus        69 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------  142 (252)
T PRK07856         69 IVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS------  142 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC------
Confidence            99999999999999998766677788999999999999999999999999999874 45899999999988776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+++++|+|.
T Consensus       143 ---------~~~~~Y~~sK~a~~~l~~~  161 (252)
T PRK07856        143 ---------PGTAAYGAAKAGLLNLTRS  161 (252)
T ss_pred             ---------CCCchhHHHHHHHHHHHHH
Confidence                     7889999999999999874

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.2e-28  Score=201.98  Aligned_cols=164  Identities=21%  Similarity=0.176  Sum_probs=137.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++++||||++|||+++|++|+++| ++|++++|++++ +++..+++++..     ..++.++.+|++|.+++++++++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-----~~~v~~~~~D~~~~~~~~~~~~~   81 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-----ASSVEVIDFDALDTDSHPKVIDA   81 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-----CCceEEEEecCCChHHHHHHHHH
Confidence            45899999999999999999999995 899999999886 777777776521     13688999999999999999998


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+ ++++|++|||+|......-...+.+...+++++|+.+++.+++.++|.|++++.|+||++||..+..+.       
T Consensus        82 ~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~-------  153 (253)
T PRK07904         82 AFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR-------  153 (253)
T ss_pred             HHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-------
Confidence            886 489999999999864322112244556678999999999999999999999888999999999876655       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+.+|++.
T Consensus       154 --------~~~~~Y~~sKaa~~~~~~~  172 (253)
T PRK07904        154 --------RSNFVYGSTKAGLDGFYLG  172 (253)
T ss_pred             --------CCCcchHHHHHHHHHHHHH
Confidence                    6777899999999998763

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.1e-28  Score=200.74  Aligned_cols=165  Identities=29%  Similarity=0.305  Sum_probs=148.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||.++|++|+++|++|++++|+.+..++..+++..       +.++.++++|++|.+++++++++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~   74 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA-------GGRAFARQGDVGSAEAVEALVDF   74 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhc-------CCeEEEEEcCCCCHHHHHHHHHH
Confidence            36789999999999999999999999999999999998877666655541       14688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.++++++|++|||+|.....++.+.+.+++++++++|+.+++.+++.+++.|++++.++|+++||..+..+.       
T Consensus        75 i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-------  147 (252)
T PRK06138         75 VAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-------  147 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-------
Confidence            9999999999999999877777788899999999999999999999999999998888999999999888776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+++|++++++++.
T Consensus       148 --------~~~~~Y~~sK~a~~~~~~~  166 (252)
T PRK06138        148 --------RGRAAYVASKGAIASLTRA  166 (252)
T ss_pred             --------CCccHHHHHHHHHHHHHHH
Confidence                    7788999999999999874

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.7e-28  Score=203.22  Aligned_cols=159  Identities=26%  Similarity=0.384  Sum_probs=139.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+..               ...++.++.+|++|.++++++++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------------~~~~~~~~~~D~~~~~~~~~~~~   69 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------------LPEGVEFVAADLTTAEGCAAVAR   69 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------------cCCceeEEecCCCCHHHHHHHHH
Confidence            367899999999999999999999999999999999986431               01357889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          141 AWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++.+.++++|++|||||...  ..++.+.+.+++++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.+   
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---  146 (260)
T PRK06523         70 AVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP---  146 (260)
T ss_pred             HHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC---
Confidence            99999999999999999653  3456778899999999999999999999999999988789999999998876641   


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       147 -----------~~~~~Y~~sK~a~~~l~~~  165 (260)
T PRK06523        147 -----------ESTTAYAAAKAALSTYSKS  165 (260)
T ss_pred             -----------CCcchhHHHHHHHHHHHHH
Confidence                       3678899999999999874

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.96  E-value=4.1e-28  Score=204.83  Aligned_cols=158  Identities=23%  Similarity=0.271  Sum_probs=139.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||++++++|+++|++|++++++++..+.               .++.++.+|++|+++++++++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~   69 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---------------ENYQFVPTDVSSAEEVNHTVA   69 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---------------CceEEEEccCCCHHHHHHHHH
Confidence            35788999999999999999999999999999999998654311               257788999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCC---------CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGE---------PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~---------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      ++.+.++++|++|||||......         +.+.+.++|++++++|+.+++.++++++++|++++.|+||++||..+.
T Consensus        70 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  149 (266)
T PRK06171         70 EIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL  149 (266)
T ss_pred             HHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence            99999999999999999754322         345789999999999999999999999999998888999999999988


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+.               ++...|++||+|+++|+|.
T Consensus       150 ~~~---------------~~~~~Y~~sK~a~~~l~~~  171 (266)
T PRK06171        150 EGS---------------EGQSCYAATKAALNSFTRS  171 (266)
T ss_pred             CCC---------------CCCchhHHHHHHHHHHHHH
Confidence            876               7888999999999999874

>PRK12743 oxidoreductase; Provisional

Probab=99.96  E-value=1.2e-27  Score=200.96  Aligned_cols=163  Identities=26%  Similarity=0.306  Sum_probs=142.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|+++||||++|||+++|++|+++|++|+++++ +.+.+++..+++...      +.++.++.+|+++.++++++++++.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH------GVRAEIRQLDLSDLPEGAQALDKLI   75 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHHHHHH
Confidence            589999999999999999999999999998865 555566665555441      2468899999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      +.++++|++|||+|.....++.+.+.+++++++++|+.+++.++++++++|.+++ .|+||++||..+..+.        
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~--------  147 (256)
T PRK12743         76 QRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL--------  147 (256)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC--------
Confidence            9999999999999987666677889999999999999999999999999997653 5899999999877776        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|+++|+++.++++.
T Consensus       148 -------~~~~~Y~~sK~a~~~l~~~  166 (256)
T PRK12743        148 -------PGASAYTAAKHALGGLTKA  166 (256)
T ss_pred             -------CCcchhHHHHHHHHHHHHH
Confidence                   7888999999999999864

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-27  Score=199.02  Aligned_cols=167  Identities=29%  Similarity=0.343  Sum_probs=150.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+++|+++||||++|||.++|++|+++|++|++++|+++++++..++++..      ..++.++.+|++|.++++++++
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~   76 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA------GGRAHAIAADLADPASVQRFFD   76 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999999988888777776542      1468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|++|++||..+..+.      
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------  150 (250)
T PRK12939         77 AAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA------  150 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC------
Confidence            99998899999999999877777788899999999999999999999999999998878999999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|+++|++++++++.
T Consensus       151 ---------~~~~~y~~sK~~~~~~~~~  169 (250)
T PRK12939        151 ---------PKLGAYVASKGAVIGMTRS  169 (250)
T ss_pred             ---------CCcchHHHHHHHHHHHHHH
Confidence                     7778899999999999874

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.96  E-value=1.7e-27  Score=198.78  Aligned_cols=166  Identities=26%  Similarity=0.402  Sum_probs=144.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++|+++||||++|||.++|++|+++|++|+++.+ +++..++..+++.+.      +.++.++.+|+++.++++++++
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~   76 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE------GHDVYAVQADVSKVEDANRLVE   76 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHH
Confidence            467899999999999999999999999999987654 455555555555431      2468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||......+.+.+.+.+++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.      
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  150 (247)
T PRK12935         77 EAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG------  150 (247)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC------
Confidence            99999999999999999877666778888999999999999999999999999988777899999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|++++++.
T Consensus       151 ---------~~~~~Y~~sK~a~~~~~~~  169 (247)
T PRK12935        151 ---------FGQTNYSAAKAGMLGFTKS  169 (247)
T ss_pred             ---------CCCcchHHHHHHHHHHHHH
Confidence                     7788999999999998764

>PRK09186 flagellin modification protein A; Provisional

Probab=99.96  E-value=1.2e-27  Score=200.51  Aligned_cols=176  Identities=20%  Similarity=0.251  Sum_probs=144.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++......    ..+.++.+|++|++++.++++++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~   77 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS----KKLSLVELDITDQESLEEFLSKS   77 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCC----CceeEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998888887777553321    24567799999999999999999


Q ss_pred             hccCCCccEEEeccccCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          143 NGRLGPLHVLINNAGIFS---IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       143 ~~~~g~id~linnag~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      .+.++++|++|||||...   ..++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+...+  
T Consensus        78 ~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  155 (256)
T PRK09186         78 AEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFE--  155 (256)
T ss_pred             HHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccch--
Confidence            999999999999998643   345678899999999999999999999999999998888899999998876542100  


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhh
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                        .+ ...+......|++||+++++|++
T Consensus       156 --~~-~~~~~~~~~~Y~~sK~a~~~l~~  180 (256)
T PRK09186        156 --IY-EGTSMTSPVEYAAIKAGIIHLTK  180 (256)
T ss_pred             --hc-cccccCCcchhHHHHHHHHHHHH
Confidence              00 01111223479999999999986

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.1e-27  Score=197.39  Aligned_cols=167  Identities=25%  Similarity=0.381  Sum_probs=149.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++++++||||++|||++++++|+++|++|++++|+.+++++..+++...      +.++.++.+|++++++++++++
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY------GVKVVIATADVSDYEEVTAAIE   76 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh------CCeEEEEECCCCCHHHHHHHHH
Confidence            3467899999999999999999999999999999999988877777666431      2468889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.++++++|++|||+|....+++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.      
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~------  150 (239)
T PRK07666         77 QLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA------  150 (239)
T ss_pred             HHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC------
Confidence            99999999999999999876667778899999999999999999999999999998888999999999988876      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|+|+.++++.
T Consensus       151 ---------~~~~~Y~~sK~a~~~~~~~  169 (239)
T PRK07666        151 ---------AVTSAYSASKFGVLGLTES  169 (239)
T ss_pred             ---------CCCcchHHHHHHHHHHHHH
Confidence                     7788899999999998763

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=201.65  Aligned_cols=160  Identities=25%  Similarity=0.222  Sum_probs=143.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++..        .++.++.+|++|.++++++++.+.+.
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~   73 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGA--------GNAWTGALDVTDRAAWDAALADFAAA   73 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcC--------CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999998877766554431        36889999999999999999988776


Q ss_pred             -CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          146 -LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 -~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                       ++++|++|||||......+.+.+.+++++++++|+.+++.+++++.+.|++++.++||++||..+..+.          
T Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  143 (260)
T PRK08267         74 TGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ----------  143 (260)
T ss_pred             cCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC----------
Confidence             789999999999987777888899999999999999999999999999998888999999999988887          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           +....|++||+++++|+++
T Consensus       144 -----~~~~~Y~~sKaa~~~~~~~  162 (260)
T PRK08267        144 -----PGLAVYSATKFAVRGLTEA  162 (260)
T ss_pred             -----CCchhhHHHHHHHHHHHHH
Confidence                 7888999999999998864

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-27  Score=200.49  Aligned_cols=165  Identities=24%  Similarity=0.308  Sum_probs=143.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+ ..+..+++.+.      +.++.++.+|+++.+++++++++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~   75 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR------GHRCTAVVADVRDPASVAAAIKR   75 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh------CCceEEEECCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999864 33444444331      14678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~  220 (249)
                      +.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|+|.+.+.++||++||..+. .+.      
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  149 (263)
T PRK08226         76 AKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD------  149 (263)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCC------
Confidence            9999999999999999877778888899999999999999999999999999988777899999998763 333      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|++++++++.
T Consensus       150 ---------~~~~~Y~~sK~a~~~~~~~  168 (263)
T PRK08226        150 ---------PGETAYALTKAAIVGLTKS  168 (263)
T ss_pred             ---------CCcchHHHHHHHHHHHHHH
Confidence                     6778899999999999874

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-27  Score=197.88  Aligned_cols=164  Identities=23%  Similarity=0.278  Sum_probs=146.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++|+++||||++|||++++++|+++|++|++++|++++.++..+++.+.      ..++.++.+|++|.+++.++++++.
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   78 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST------GVKAAAYSIDLSNPEAIAPGIAELL   78 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC------CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999988777766666541      1468889999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      ++++++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.         
T Consensus        79 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  149 (241)
T PRK07454         79 EQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF---------  149 (241)
T ss_pred             HHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC---------
Confidence            99999999999999876667778899999999999999999999999999998878999999999887766         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|+++|++++++++.
T Consensus       150 ------~~~~~Y~~sK~~~~~~~~~  168 (241)
T PRK07454        150 ------PQWGAYCVSKAALAAFTKC  168 (241)
T ss_pred             ------CCccHHHHHHHHHHHHHHH
Confidence                  7788899999999998863

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.7e-27  Score=199.97  Aligned_cols=166  Identities=26%  Similarity=0.305  Sum_probs=141.8

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcCh-----------HHHHHHHHHHHHhhcCCCCCCceEEEEcc
Q 025705           62 PVNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNL-----------KAANELIQKWQEEWSGKGLPLNIEAMELD  128 (249)
Q Consensus        62 ~~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  128 (249)
                      ++++|+++||||++  |||.++|++|+++|++|++++|++           .......+++..      .+.++.++.+|
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~D   75 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES------YGVRCEHMEID   75 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh------cCCeEEEEECC
Confidence            35789999999994  999999999999999999999872           222222223221      12468899999


Q ss_pred             CCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       129 ~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                      +++.++++++++++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+.+++++.|.+++.|+||++||.
T Consensus        76 ~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~  155 (256)
T PRK12748         76 LSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG  155 (256)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCc
Confidence            99999999999999999999999999999876677888899999999999999999999999999988777899999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+.               ++...|++||+|++++++.
T Consensus       156 ~~~~~~---------------~~~~~Y~~sK~a~~~~~~~  180 (256)
T PRK12748        156 QSLGPM---------------PDELAYAATKGAIEAFTKS  180 (256)
T ss_pred             cccCCC---------------CCchHHHHHHHHHHHHHHH
Confidence            887766               6778899999999999774

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-27  Score=199.30  Aligned_cols=167  Identities=23%  Similarity=0.304  Sum_probs=143.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +...+|+++||||++|||++++++|+++|++|++++++ .+.+++..+++...      +.++.++.+|++|.+++++++
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~   78 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL------GRRAVALQADLADEAEVRALV   78 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHH
Confidence            34568999999999999999999999999999887664 45555565555431      146888999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++++++.|.++..|+||+++|..+..+.     
T Consensus        79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~-----  153 (258)
T PRK09134         79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN-----  153 (258)
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC-----
Confidence            999988899999999999877667788899999999999999999999999999988778999999997665554     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                |....|++||+|+++++|.
T Consensus       154 ----------p~~~~Y~~sK~a~~~~~~~  172 (258)
T PRK09134        154 ----------PDFLSYTLSKAALWTATRT  172 (258)
T ss_pred             ----------CCchHHHHHHHHHHHHHHH
Confidence                      6677899999999999874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=2e-27  Score=199.73  Aligned_cols=166  Identities=23%  Similarity=0.281  Sum_probs=148.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||+++||.+++++|+++|++|++++|++++.++..+++.+.      +.++.++.+|++|.+++++++++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~   77 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA------GGKAIGVAMDVTNEDAVNAGIDK   77 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc------CceEEEEECCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888777776542      24678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhh-hcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSL-IRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m-~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||||.....+..+.+.+++++.+++|+.+++.+++.+++.| .+.+.|+||++||..+..+.      
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~------  151 (262)
T PRK13394         78 VAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS------  151 (262)
T ss_pred             HHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC------
Confidence            98888999999999998776777788899999999999999999999999999 67777899999998877766      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|+++.+++|.
T Consensus       152 ---------~~~~~y~~sk~a~~~~~~~  170 (262)
T PRK13394        152 ---------PLKSAYVTAKHGLLGLARV  170 (262)
T ss_pred             ---------CCCcccHHHHHHHHHHHHH
Confidence                     7778999999999998873

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-27  Score=198.56  Aligned_cols=164  Identities=24%  Similarity=0.302  Sum_probs=142.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.+.      ..++..+.+|+++.++++++++
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~   75 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD------GGTAIAVQVDVSDPDSAKAMAD   75 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHH
Confidence            3567899999999999999999999999999999999987777766665542      1356788999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          141 AWNGRLGPLHVLINNAGIFS---IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++.+.++++|++|||||...   ..++.+.+.+++++.+++|+.+++.++++++|.|.+.+.|+||++||..++      
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------  149 (250)
T PRK07774         76 ATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW------  149 (250)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc------
Confidence            99999999999999999853   245667788999999999999999999999999988878999999998765      


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|++++++.
T Consensus       150 ------------~~~~~Y~~sK~a~~~~~~~  168 (250)
T PRK07774        150 ------------LYSNFYGLAKVGLNGLTQQ  168 (250)
T ss_pred             ------------CCccccHHHHHHHHHHHHH
Confidence                        3446799999999999874

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-27  Score=200.95  Aligned_cols=168  Identities=25%  Similarity=0.371  Sum_probs=147.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +...++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...      +.++.++.+|+++.+++.+++
T Consensus         5 ~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~   78 (274)
T PRK07775          5 EPHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD------GGEAVAFPLDVTDPDSVKSFV   78 (274)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHH
Confidence            34567789999999999999999999999999999999987776665555431      136788899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.++++|++|||||.....+..+.+.+.+++.+++|+.+++.+++.++|.|.+++.|+||++||..++.+.     
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-----  153 (274)
T PRK07775         79 AQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-----  153 (274)
T ss_pred             HHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----
Confidence            999888899999999999876667778889999999999999999999999999988878999999999887766     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|++++++++.
T Consensus       154 ----------~~~~~Y~~sK~a~~~l~~~  172 (274)
T PRK07775        154 ----------PHMGAYGAAKAGLEAMVTN  172 (274)
T ss_pred             ----------CCcchHHHHHHHHHHHHHH
Confidence                      6778899999999999874

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=200.68  Aligned_cols=163  Identities=25%  Similarity=0.308  Sum_probs=142.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++|++++||||++|||+++|++|+++|++|++++|+++.. +..+++.+.      +.++.++.+|+++++++++++++
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   76 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL------QPRAEFVQVDLTDDAQCRDAVEQ   76 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc------CCceEEEEccCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999998766 555555442      24688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||......+.+.+ +++++.+++|+.+++.+++.++|.|.+. .|+||++||..+..+.       
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~-------  147 (258)
T PRK08628         77 TVAKFGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQ-------  147 (258)
T ss_pred             HHHhcCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCC-------
Confidence            999999999999999976544454444 9999999999999999999999998765 4899999999988776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||++++++++.
T Consensus       148 --------~~~~~Y~~sK~a~~~~~~~  166 (258)
T PRK08628        148 --------GGTSGYAAAKGAQLALTRE  166 (258)
T ss_pred             --------CCCchhHHHHHHHHHHHHH
Confidence                    7888999999999999874

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=199.21  Aligned_cols=161  Identities=24%  Similarity=0.335  Sum_probs=142.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++         +.++.++.+|++|.+++.+++++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~   73 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---------GESALVIRADAGDVAAQKALAQA   73 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---------CCceEEEEecCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999977665554433         13678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|+|.+  .+++|+++|..+..+.       
T Consensus        74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~-------  144 (249)
T PRK06500         74 LAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGM-------  144 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCC-------
Confidence            9998999999999999877667778899999999999999999999999999864  3789999998888776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              +....|+++|+++++|++.
T Consensus       145 --------~~~~~Y~~sK~a~~~~~~~  163 (249)
T PRK06500        145 --------PNSSVYAASKAALLSLAKT  163 (249)
T ss_pred             --------CCccHHHHHHHHHHHHHHH
Confidence                    7888999999999999863

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-27  Score=198.44  Aligned_cols=165  Identities=26%  Similarity=0.325  Sum_probs=149.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++|+++||||+++||.++|++|+++|++|++++|+++++++..+++...      ..++..+.+|++|+++++++++++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~   75 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA------GGKAIGVAMDVTDEEAINAGIDYA   75 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            56799999999999999999999999999999999998887777666541      246888999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.++++|++|||||........+.+.++++..+++|+.+++.+++.+++.|.+++.++||++||..+..+.        
T Consensus        76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~--------  147 (258)
T PRK12429         76 VETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS--------  147 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC--------
Confidence            999999999999999877777888899999999999999999999999999998888999999999888877        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|+++|+++.+++|.
T Consensus       148 -------~~~~~y~~~k~a~~~~~~~  166 (258)
T PRK12429        148 -------AGKAAYVSAKHGLIGLTKV  166 (258)
T ss_pred             -------CCcchhHHHHHHHHHHHHH
Confidence                   7889999999999999873

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.96  E-value=2e-27  Score=197.75  Aligned_cols=163  Identities=26%  Similarity=0.356  Sum_probs=144.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++||||++|||++++++|+++|+.|++.+|+.+++++..+++.         .++.++.+|+++.+++++++++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~   73 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG---------ERVKIFPANLSDRDEVKALGQK   73 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC---------CceEEEEccCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999998877765543321         3578889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++++.+.|.+++.++||++||..+..+.       
T Consensus        74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  146 (245)
T PRK12936         74 AEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN-------  146 (245)
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC-------
Confidence            9998999999999999877667778889999999999999999999999999887777899999999888877       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              +....|+++|+|+.+|+|.
T Consensus       147 --------~~~~~Y~~sk~a~~~~~~~  165 (245)
T PRK12936        147 --------PGQANYCASKAGMIGFSKS  165 (245)
T ss_pred             --------CCCcchHHHHHHHHHHHHH
Confidence                    7788999999999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.1e-27  Score=196.46  Aligned_cols=168  Identities=24%  Similarity=0.315  Sum_probs=145.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC--HHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS--LDSVVRF  138 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~v~~~  138 (249)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..     ..++.++.+|+++  .+++.++
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-----HPEPFAIRFDLMSAEEKEFEQF   76 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-----CCCcceEEeeecccchHHHHHH
Confidence            45788999999999999999999999999999999999988877777765421     1246778899986  5688888


Q ss_pred             HHHHhccC-CCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          139 SEAWNGRL-GPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       139 ~~~~~~~~-g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++.+.+ +++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.+.+.|+||++||..+..+.  
T Consensus        77 ~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~--  154 (239)
T PRK08703         77 AATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPK--  154 (239)
T ss_pred             HHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCC--
Confidence            88888877 78999999999753 346778899999999999999999999999999988778999999998887766  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|++.
T Consensus       155 -------------~~~~~Y~~sKaa~~~~~~~  173 (239)
T PRK08703        155 -------------AYWGGFGASKAALNYLCKV  173 (239)
T ss_pred             -------------CCccchHHhHHHHHHHHHH
Confidence                         7788999999999999864

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-27  Score=200.74  Aligned_cols=163  Identities=25%  Similarity=0.389  Sum_probs=143.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||++|||+++|++|+++|++|++++|+.+.+++..+++....     ...+.++.+|++|.++++++++++.+.
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-----GTVPEHRALDISDYDAVAAFAADIHAA   75 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCcceEEEeeCCCHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999999888877777765421     123456789999999999999999998


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      ++++|++|||+|.....++.+.+.+++++.+++|+.+++.++++++|.|.+. +.|+||++||..+..+.          
T Consensus        76 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~----------  145 (272)
T PRK07832         76 HGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL----------  145 (272)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC----------
Confidence            9999999999998777778889999999999999999999999999999764 45899999999887776          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           +....|++||+|+++|++.
T Consensus       146 -----~~~~~Y~~sK~a~~~~~~~  164 (272)
T PRK07832        146 -----PWHAAYSASKFGLRGLSEV  164 (272)
T ss_pred             -----CCCcchHHHHHHHHHHHHH
Confidence                 7888999999999999863

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.9e-27  Score=198.64  Aligned_cols=164  Identities=26%  Similarity=0.364  Sum_probs=146.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++||||++|||++++++|+++|++|++++|+++++++..+++..       ..++.++.+|++|.++++++++.
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~   74 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPY-------PGRHRWVVADLTSEAGREAVLAR   74 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhc-------CCceEEEEccCCCHHHHHHHHHH
Confidence            35789999999999999999999999999999999998887776665511       13788999999999999999998


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+ ++++|++|||||.....++.+.+.+++++++++|+.|++.+++.++|+|.+++.|+||++||..+..+.       
T Consensus        75 ~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  146 (263)
T PRK09072         75 ARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY-------  146 (263)
T ss_pred             HHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC-------
Confidence            876 789999999999877677788899999999999999999999999999998878999999999888776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+++|+|+.++++.
T Consensus       147 --------~~~~~Y~~sK~a~~~~~~~  165 (263)
T PRK09072        147 --------PGYASYCASKFALRGFSEA  165 (263)
T ss_pred             --------CCccHHHHHHHHHHHHHHH
Confidence                    7788899999999998763

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-27  Score=201.36  Aligned_cols=160  Identities=22%  Similarity=0.334  Sum_probs=141.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .|+++||||++|||++++++|+++|++|++++|+++.+++..++.    .     .++.++.+|++|.++++++++++.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~-----~~~~~~~~D~~~~~~~~~~~~~~~~   72 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----G-----DRLWVLQLDVTDSAAVRAVVDRAFA   72 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c-----CceEEEEccCCCHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999987665443322    1     2578899999999999999999888


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      .++++|++|||||....++..+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+..+.          
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  142 (276)
T PRK06482         73 ALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY----------  142 (276)
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC----------
Confidence            8899999999999987777888889999999999999999999999999998878899999998877665          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++...|++||+++++|++.
T Consensus       143 -----~~~~~Y~~sK~a~~~~~~~  161 (276)
T PRK06482        143 -----PGFSLYHATKWGIEGFVEA  161 (276)
T ss_pred             -----CCCchhHHHHHHHHHHHHH
Confidence                 7888999999999998863

>TIGR02415 23BDH acetoin reductases

Probab=99.95  E-value=4e-27  Score=197.18  Aligned_cols=162  Identities=25%  Similarity=0.297  Sum_probs=145.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...      +.++.++.+|++|+++++++++++.+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~i~~~~~~~~~~   74 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA------GGKAVAYKLDVSDKDQVFSAIDQAAEK   74 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            67999999999999999999999999999999987777776666542      246889999999999999999999999


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      ++++|++|||||....+++.+.+.+++++++++|+.+++.+++.+++.|++++ .|+||++||..+..+.          
T Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  144 (254)
T TIGR02415        75 FGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN----------  144 (254)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC----------
Confidence            99999999999987777788899999999999999999999999999998865 4899999999988887          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           +....|++||+++++|++.
T Consensus       145 -----~~~~~Y~~sK~a~~~~~~~  163 (254)
T TIGR02415       145 -----PILSAYSSTKFAVRGLTQT  163 (254)
T ss_pred             -----CCCcchHHHHHHHHHHHHH
Confidence                 7889999999999999863

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.95  E-value=2.4e-27  Score=199.31  Aligned_cols=163  Identities=25%  Similarity=0.296  Sum_probs=138.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAE----SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~----~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++||||++|||+++|++|++    +|++|++++|+.+.+++..+++....+    +.++.++.+|++|.++++++++++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~   77 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERS----GLRVVRVSLDLGAEAGLEQLLKAL   77 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCC----CceEEEEEeccCCHHHHHHHHHHH
Confidence            689999999999999999997    799999999999988888777765211    246888999999999999999999


Q ss_pred             hccCCCc----cEEEeccccCCCC--CCCC-CCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcCCccccC
Q 025705          143 NGRLGPL----HVLINNAGIFSIG--EPQK-FSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNSVMHYVG  213 (249)
Q Consensus       143 ~~~~g~i----d~linnag~~~~~--~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS~~~~~~  213 (249)
                      .+.++.+    |++|||||.....  ...+ .+.+++++++++|+.+++.+++.++|.|.+++  .|+||++||..+..+
T Consensus        78 ~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~  157 (256)
T TIGR01500        78 RELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP  157 (256)
T ss_pred             HhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC
Confidence            8876643    6999999975432  2232 35789999999999999999999999998652  579999999988877


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               ++...|++||+|+++|++.
T Consensus       158 ~---------------~~~~~Y~asKaal~~l~~~  177 (256)
T TIGR01500       158 F---------------KGWALYCAGKAARDMLFQV  177 (256)
T ss_pred             C---------------CCchHHHHHHHHHHHHHHH
Confidence            6               7888999999999999874

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=5.5e-28  Score=207.21  Aligned_cols=170  Identities=16%  Similarity=0.162  Sum_probs=127.3

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHh------hcCCCC---CCceEEEEccC
Q 025705           61 PPVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE------WSGKGL---PLNIEAMELDL  129 (249)
Q Consensus        61 ~~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~------~~~~~~---~~~v~~~~~D~  129 (249)
                      .+++||+++|||++  +|||+++|+.|+++|++|++.++.+ .++...+.....      ....+.   ..++..+.+|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            46789999999996  9999999999999999999987652 111111111000      000000   00111122333


Q ss_pred             CCH------------------HHHHHHHHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 025705          130 LSL------------------DSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSIL  189 (249)
Q Consensus       130 ~~~------------------~~v~~~~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~  189 (249)
                      ++.                  ++++++++++.+.+|++|+||||||...  ..++.+.+.++|++++++|+.|+++++|+
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a  162 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH  162 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            332                  4689999999999999999999999753  46788999999999999999999999999


Q ss_pred             hchhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCcc-cchhhHHHHHhhhhc
Q 025705          190 LFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLM-GYSGSKLAQVKLETK  248 (249)
Q Consensus       190 ~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~asKaal~~l~~~  248 (249)
                      ++|+|+++  |+||+++|+.+..+.               |++. .|++||+|+++|+|.
T Consensus       163 ~~p~m~~~--G~ii~iss~~~~~~~---------------p~~~~~Y~asKaAl~~lt~~  205 (299)
T PRK06300        163 FGPIMNPG--GSTISLTYLASMRAV---------------PGYGGGMSSAKAALESDTKV  205 (299)
T ss_pred             HHHHhhcC--CeEEEEeehhhcCcC---------------CCccHHHHHHHHHHHHHHHH
Confidence            99999753  799999999888776               6654 799999999999874

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.4e-27  Score=199.95  Aligned_cols=165  Identities=26%  Similarity=0.395  Sum_probs=146.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+|+++||||+||||.+++++|+++|++|++++|+++.+++..+++...    +...++.++.+|++|.+++++ ++++.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~-~~~~~   76 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQL----NLQQNIKVQQLDVTDQNSIHN-FQLVL   76 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc----CCCCceeEEecCCCCHHHHHH-HHHHH
Confidence            5789999999999999999999999999999999988877776655442    112468899999999999999 89888


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.++++|++|||||....+...+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.         
T Consensus        77 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------  147 (280)
T PRK06914         77 KEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF---------  147 (280)
T ss_pred             HhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC---------
Confidence            88899999999999887777788899999999999999999999999999998888999999999888877         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|++||+++++|++.
T Consensus       148 ------~~~~~Y~~sK~~~~~~~~~  166 (280)
T PRK06914        148 ------PGLSPYVSSKYALEGFSES  166 (280)
T ss_pred             ------CCCchhHHhHHHHHHHHHH
Confidence                  7888999999999999864

>PLN00015 protochlorophyllide reductase

Probab=99.95  E-value=2e-27  Score=205.15  Aligned_cols=173  Identities=32%  Similarity=0.446  Sum_probs=138.2

Q ss_pred             EEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           69 IVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        69 lItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      +||||++|||+++|++|+++| ++|++++|+.+++++..+++..      ...++.++.+|++|.++++++++++.+.++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   74 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM------PKDSYTVMHLDLASLDSVRQFVDNFRRSGR   74 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC------CCCeEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence            699999999999999999999 9999999998887776666532      113678889999999999999999998888


Q ss_pred             CccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcCCccccCCC-----C---
Q 025705          148 PLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNSVMHYVGFV-----D---  216 (249)
Q Consensus       148 ~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS~~~~~~~~-----~---  216 (249)
                      ++|+||||||+... .+..+.+.+++++++++|+.|++.+++.++|.|++++  .|+||++||..+..+..     +   
T Consensus        75 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  154 (308)
T PLN00015         75 PLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKAN  154 (308)
T ss_pred             CCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccc
Confidence            99999999998543 3456788999999999999999999999999998876  68999999998764311     0   


Q ss_pred             cccccc------------ccccccCCCcccchhhHHHHHhhhh
Q 025705          217 TEDMNV------------VSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       217 ~~~~~~------------~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      .+++..            +.....+++...|++||+|+..+++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~  197 (308)
T PLN00015        155 LGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQ  197 (308)
T ss_pred             hhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHH
Confidence            011100            0011234567889999999777665

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.95  E-value=5.1e-27  Score=195.99  Aligned_cols=165  Identities=29%  Similarity=0.362  Sum_probs=147.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++++++||||+++||.+++++|+++|++|++++|+.+..++..+++.+.      ..++.++.+|++|.++++++++++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~   74 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK------GGNAQAFACDITDRDSVDTAVAAA   74 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            36799999999999999999999999999999999988777766665441      136888999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.+.+.++||++||..++.+.        
T Consensus        75 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~--------  146 (250)
T TIGR03206        75 EQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS--------  146 (250)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC--------
Confidence            998999999999999876677778889999999999999999999999999988877899999999888776        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             +....|+++|+|++++++.
T Consensus       147 -------~~~~~Y~~sK~a~~~~~~~  165 (250)
T TIGR03206       147 -------SGEAVYAACKGGLVAFSKT  165 (250)
T ss_pred             -------CCCchHHHHHHHHHHHHHH
Confidence                   7788899999999998874

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.95  E-value=5.1e-27  Score=203.73  Aligned_cols=182  Identities=31%  Similarity=0.401  Sum_probs=143.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+.+|+++||||++|||.+++++|+++|++|++++|+.+++++..+++..      ...++.++.+|++|.++++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~Dl~~~~~v~~~~~   75 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI------PPDSYTIIHIDLGDLDSVRRFVD   75 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc------cCCceEEEEecCCCHHHHHHHHH
Confidence            345789999999999999999999999999999999999888777766642      11368889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC--CeEEEEcCCccccCC---
Q 025705          141 AWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP--SRIINVNSVMHYVGF---  214 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~--g~Iv~vsS~~~~~~~---  214 (249)
                      ++.+..+++|+||||||+... ....+.+.++++.++++|+.|++.++++++|.|++++.  ++||++||..+..+.   
T Consensus        76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~  155 (322)
T PRK07453         76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGG  155 (322)
T ss_pred             HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCC
Confidence            988877889999999997543 22346788999999999999999999999999988753  699999998765421   


Q ss_pred             -CC------cccccc----------ccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 -VD------TEDMNV----------VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 -~~------~~~~~~----------~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       ..      .+++..          .....++.+...|+.||++...+++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  206 (322)
T PRK07453        156 KIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRE  206 (322)
T ss_pred             ccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHH
Confidence             00      000000          00113345678899999999887653

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-26  Score=195.13  Aligned_cols=167  Identities=23%  Similarity=0.314  Sum_probs=148.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...      ..++.++.+|+++.++++++++
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~   78 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE------GGAAHVVSLDVTDYQSIKAAVA   78 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHH
Confidence            3578899999999999999999999999999999999998887777666442      1367889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--------CCeEEEEcCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--------PSRIINVNSVMHYV  212 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--------~g~Iv~vsS~~~~~  212 (249)
                      ++.+.++++|++|||||.....++.+.+.++++.++++|+.+++.++++++|.|.++.        .|+||++||..+..
T Consensus        79 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  158 (258)
T PRK06949         79 HAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR  158 (258)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC
Confidence            9999999999999999987666777888999999999999999999999999998654        47999999998877


Q ss_pred             CCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          213 GFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +.               +....|+++|++++++++.
T Consensus       159 ~~---------------~~~~~Y~~sK~a~~~~~~~  179 (258)
T PRK06949        159 VL---------------PQIGLYCMSKAAVVHMTRA  179 (258)
T ss_pred             CC---------------CCccHHHHHHHHHHHHHHH
Confidence            66               7788999999999999874

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.6e-27  Score=198.88  Aligned_cols=155  Identities=27%  Similarity=0.353  Sum_probs=137.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++.    .+        ..+.++.+|+++.++++++++++.+.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~--------~~~~~~~~Dl~~~~~~~~~~~~~~~~   69 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA--------AGFTAVQLDVNDGAALARLAEELEAE   69 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH--------CCCeEEEeeCCCHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999997665433    22        13567889999999999999999988


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      ++++|++|||||....+++.+.+.+++++.+++|+.+++.++++++|.|.+. .|+||++||..+..+.           
T Consensus        70 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----------  137 (274)
T PRK05693         70 HGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVT-----------  137 (274)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCC-----------
Confidence            8999999999998777778888999999999999999999999999999764 5899999999988776           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          +....|++||+++++|++.
T Consensus       138 ----~~~~~Y~~sK~al~~~~~~  156 (274)
T PRK05693        138 ----PFAGAYCASKAAVHALSDA  156 (274)
T ss_pred             ----CCccHHHHHHHHHHHHHHH
Confidence                7788999999999998763

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.2e-27  Score=196.54  Aligned_cols=162  Identities=25%  Similarity=0.302  Sum_probs=139.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++||+++||||++|||++++++|+++|++|++++|+..++++..+++           ...++.+|+++++++++++++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~   72 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----------GGLFVPTDVTDEDAVNALFDT   72 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----------CCcEEEeeCCCHHHHHHHHHH
Confidence            478899999999999999999999999999999999977665544332           124678999999999999999


Q ss_pred             HhccCCCccEEEeccccCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          142 WNGRLGPLHVLINNAGIFSI--GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +.+.++++|++|||||....  .++.+.+.+.+++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+    
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~----  148 (255)
T PRK06057         73 AAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA----  148 (255)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC----
Confidence            99888999999999997542  345677889999999999999999999999999987789999999988776641    


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|++++++.
T Consensus       149 ----------~~~~~Y~~sKaal~~~~~~  167 (255)
T PRK06057        149 ----------TSQISYTASKGGVLAMSRE  167 (255)
T ss_pred             ----------CCCcchHHHHHHHHHHHHH
Confidence                      3567899999999998873

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=195.20  Aligned_cols=171  Identities=26%  Similarity=0.329  Sum_probs=146.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||.++|++|+++|++|++++|+.++++...+++...      +.++.++.+|++|+++++++++
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~------~~~~~~~~~Dl~d~~~i~~~~~   81 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL------GIDALWIAADVADEADIERLAE   81 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEccCCCHHHHHHHHH
Confidence            3577899999999999999999999999999999999988877766666541      2367889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchh-hhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPS-LIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~-m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.++++|++|||||.....+..+.+.+.+++.+++|+.+++.+++++.++ |.+++.++||++||..+..+...   
T Consensus        82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~---  158 (259)
T PRK08213         82 ETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP---  158 (259)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc---
Confidence            99998899999999999876666777889999999999999999999999998 77766789999999887766521   


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ..++...|+++|++++++++.
T Consensus       159 --------~~~~~~~Y~~sKa~~~~~~~~  179 (259)
T PRK08213        159 --------EVMDTIAYNTSKGAVINFTRA  179 (259)
T ss_pred             --------cccCcchHHHHHHHHHHHHHH
Confidence                    113458899999999999874

>PRK07069 short chain dehydrogenase; Validated

Probab=99.95  E-value=7.3e-27  Score=195.16  Aligned_cols=162  Identities=26%  Similarity=0.329  Sum_probs=143.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++...+++.+...    ...+..+.+|++|.++++++++++.+.+
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHG----EGVAFAAVQDVTDEAQWQALLAQAADAM   77 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC----CceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999999998 6666666665544211    1245668899999999999999999999


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      +++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||..++.+.            
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~------------  145 (251)
T PRK07069         78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE------------  145 (251)
T ss_pred             CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC------------
Confidence            99999999999887777888899999999999999999999999999998888999999999988877            


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         ++...|+++|+++++|+|.
T Consensus       146 ---~~~~~Y~~sK~a~~~~~~~  164 (251)
T PRK07069        146 ---PDYTAYNASKAAVASLTKS  164 (251)
T ss_pred             ---CCCchhHHHHHHHHHHHHH
Confidence               7888999999999999873

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.95  E-value=1e-26  Score=194.54  Aligned_cols=158  Identities=21%  Similarity=0.320  Sum_probs=139.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||++|||.++|++|+++|++|++++|+++++++..+++.         .++.++.+|++|.++++++++++.+.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dl~~~~~i~~~~~~~~~~~   72 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---------DNLYIAQLDVRNRAAIEEMLASLPAEW   72 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------cceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999887666544431         267889999999999999999999888


Q ss_pred             CCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          147 GPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       147 g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      +++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+.           
T Consensus        73 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------  141 (248)
T PRK10538         73 RNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-----------  141 (248)
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCC-----------
Confidence            99999999999753 345677899999999999999999999999999998888899999999877665           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ++...|+++|+++++|++.
T Consensus       142 ----~~~~~Y~~sK~~~~~~~~~  160 (248)
T PRK10538        142 ----AGGNVYGATKAFVRQFSLN  160 (248)
T ss_pred             ----CCCchhHHHHHHHHHHHHH
Confidence                7788999999999999864

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=195.09  Aligned_cols=167  Identities=28%  Similarity=0.353  Sum_probs=147.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..+++|+++||||++|||++++++|+++|++ |++++|+.++.++..+++.+      .+.++.++.+|+++++++++++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~D~~~~~~~~~~~   75 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA------LGAKAVFVQADLSDVEDCRRVV   75 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh------cCCeEEEEEccCCCHHHHHHHH
Confidence            3467899999999999999999999999998 99999998777766666643      1246788999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +.+.++++++|++|||+|.....++.+.+.+.+++++++|+.+++.+++++++.|.+++ .|++|++||..++.+.    
T Consensus        76 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----  151 (260)
T PRK06198         76 AAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ----  151 (260)
T ss_pred             HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC----
Confidence            99999899999999999987766777889999999999999999999999999998754 5899999999887766    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|+++|+++++|++.
T Consensus       152 -----------~~~~~Y~~sK~a~~~~~~~  170 (260)
T PRK06198        152 -----------PFLAAYCASKGALATLTRN  170 (260)
T ss_pred             -----------CCcchhHHHHHHHHHHHHH
Confidence                       7788999999999999873

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1.2e-26  Score=193.74  Aligned_cols=165  Identities=28%  Similarity=0.319  Sum_probs=146.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++||||++|||.+++++|+++|++|++++|+.++.++..+++..       +.++.++.+|++|.+++++++++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~   74 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-------GGRAIAVAADVSDEADVEAAVAA   74 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-------CCeEEEEECCCCCHHHHHHHHHH
Confidence            36789999999999999999999999999999999998877766665543       13688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||+|... ..++.+.+.+.+++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.      
T Consensus        75 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  148 (251)
T PRK07231         75 ALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR------  148 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC------
Confidence            9888899999999999753 345678899999999999999999999999999998888999999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+.+|++++++++.
T Consensus       149 ---------~~~~~y~~sk~~~~~~~~~  167 (251)
T PRK07231        149 ---------PGLGWYNASKGAVITLTKA  167 (251)
T ss_pred             ---------CCchHHHHHHHHHHHHHHH
Confidence                     7888999999999998864

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.6e-26  Score=192.49  Aligned_cols=164  Identities=26%  Similarity=0.356  Sum_probs=142.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH-HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+.+ ..++..+++.+.      +.++.++.+|+++.++++++++
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~   75 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA------GGRAIAVQADVADAAAVTRLFD   75 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHH
Confidence            467899999999999999999999999999988877543 445555555431      2478899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|.|.+  .|+||++||..+..+.      
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~------  147 (245)
T PRK12937         76 AAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPL------  147 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCC------
Confidence            99999999999999999876667788899999999999999999999999999865  4799999998877766      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|+++++++++
T Consensus       148 ---------~~~~~Y~~sK~a~~~~~~~  166 (245)
T PRK12937        148 ---------PGYGPYAASKAAVEGLVHV  166 (245)
T ss_pred             ---------CCCchhHHHHHHHHHHHHH
Confidence                     7888999999999999874

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=218.08  Aligned_cols=168  Identities=26%  Similarity=0.303  Sum_probs=148.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++...      +.++.++.+|++|.+++++++
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~~~~~~  439 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK------GGTAHAYTCDLTDSAAVDHTV  439 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHH
Confidence            34678999999999999999999999999999999999998888887777552      246889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKF--SKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~--~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++.+.+|++|++|||||......+.+.  +.+++++++++|+.+++.+++.++|.|++++.|+||++||.+++.+.   
T Consensus       440 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---  516 (657)
T PRK07201        440 KDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA---  516 (657)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC---
Confidence            9999999999999999998654444332  25789999999999999999999999998888999999999988776   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  +..+.|++||+|+++|++.
T Consensus       517 ------------~~~~~Y~~sK~a~~~~~~~  535 (657)
T PRK07201        517 ------------PRFSAYVASKAALDAFSDV  535 (657)
T ss_pred             ------------CCcchHHHHHHHHHHHHHH
Confidence                        7888999999999999874

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=195.32  Aligned_cols=163  Identities=20%  Similarity=0.237  Sum_probs=134.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh----HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL----KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++++.    +.+++..+++...      +.++.++++|+++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~   78 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA------GAKAVAFQADLTTAAAVEK   78 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh------CCcEEEEecCcCCHHHHHH
Confidence            46789999999999999999999999999977776543    3333444443321      1367889999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEE-cCCccccCCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINV-NSVMHYVGFVD  216 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~v-sS~~~~~~~~~  216 (249)
                      +++++.+.++++|++|||||.....++.+.+.+++++++++|+.+++.++++++|+|.++  |+|+++ ||..+. ..  
T Consensus        79 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~-~~--  153 (257)
T PRK12744         79 LFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGA-FT--  153 (257)
T ss_pred             HHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhcc-cC--
Confidence            999999989999999999998776777888999999999999999999999999999754  678776 454443 22  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   +....|++||+|+++|++.
T Consensus       154 -------------~~~~~Y~~sK~a~~~~~~~  172 (257)
T PRK12744        154 -------------PFYSAYAGSKAPVEHFTRA  172 (257)
T ss_pred             -------------CCcccchhhHHHHHHHHHH
Confidence                         6778899999999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-26  Score=197.10  Aligned_cols=166  Identities=23%  Similarity=0.282  Sum_probs=142.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..++++|+++||||++|||.++|++|+++|++|++++|+.+. ++...+.+..      .+.++.++.+|+++.++++++
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~  114 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK------EGVKCLLIPGDVSDEAFCKDA  114 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh------cCCeEEEEEccCCCHHHHHHH
Confidence            346788999999999999999999999999999999998643 4444444332      124688899999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.++++|++|||||.... .++.+.+.+++++++++|+.+++.+++++++.|.+  .|+||++||..++.+.   
T Consensus       115 ~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~---  189 (290)
T PRK06701        115 VEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGN---  189 (290)
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCC---
Confidence            99999989999999999997643 45778899999999999999999999999999854  3799999999988876   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  +....|++||+|+++|++.
T Consensus       190 ------------~~~~~Y~~sK~a~~~l~~~  208 (290)
T PRK06701        190 ------------ETLIDYSATKGAIHAFTRS  208 (290)
T ss_pred             ------------CCcchhHHHHHHHHHHHHH
Confidence                        6778899999999999874

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1.4e-26  Score=193.66  Aligned_cols=162  Identities=20%  Similarity=0.281  Sum_probs=135.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++|+++||||++|||+++|++|+++|++|++.++ +.+..++...++    .     .++.++.+|++|.+++++++++
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~-----~~~~~~~~D~~~~~~~~~~~~~   73 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----G-----DRAIALQADVTDREQVQAMFAT   73 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----C-----CceEEEEcCCCCHHHHHHHHHH
Confidence            56799999999999999999999999999988765 444443332221    1     3678899999999999999999


Q ss_pred             HhccCCC-ccEEEeccccCC------CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          142 WNGRLGP-LHVLINNAGIFS------IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       142 ~~~~~g~-id~linnag~~~------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      +.+.+++ +|++|||||...      ..++.+.+.+++++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.
T Consensus        74 ~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  153 (253)
T PRK08642         74 ATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPV  153 (253)
T ss_pred             HHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC
Confidence            9888887 999999998642      234677889999999999999999999999999988778999999997665444


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++...|++||+|+++|+|.
T Consensus       154 ---------------~~~~~Y~~sK~a~~~l~~~  172 (253)
T PRK08642        154 ---------------VPYHDYTTAKAALLGLTRN  172 (253)
T ss_pred             ---------------CCccchHHHHHHHHHHHHH
Confidence                           5677899999999999875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.95  E-value=1.5e-26  Score=218.19  Aligned_cols=173  Identities=23%  Similarity=0.264  Sum_probs=152.4

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      ..+...+.+|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+....    .++..+.+|++|.++++
T Consensus       406 ~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~----~~~~~v~~Dvtd~~~v~  481 (676)
T TIGR02632       406 MPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA----GRAVALKMDVTDEQAVK  481 (676)
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC----CcEEEEECCCCCHHHHH
Confidence            33445688999999999999999999999999999999999988887777766543211    25778899999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFV  215 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~  215 (249)
                      ++++++.+.+|++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++ .|+||++||..+..+. 
T Consensus       482 ~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~-  560 (676)
T TIGR02632       482 AAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG-  560 (676)
T ss_pred             HHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-
Confidence            99999999999999999999987667788889999999999999999999999999998765 5799999999888776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++++|.
T Consensus       561 --------------~~~~aY~aSKaA~~~l~r~  579 (676)
T TIGR02632       561 --------------KNASAYSAAKAAEAHLARC  579 (676)
T ss_pred             --------------CCCHHHHHHHHHHHHHHHH
Confidence                          7889999999999999874

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.4e-26  Score=195.03  Aligned_cols=167  Identities=23%  Similarity=0.245  Sum_probs=146.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++....    ...++.++.+|++|.++++++++++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK----GAGAVRYEPADVTDEDQVARAVDAA   80 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc----CCCceEEEEcCCCCHHHHHHHHHHH
Confidence            678999999999999999999999999999999999887777666655421    1246888999999999999999999


Q ss_pred             hccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          143 NGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       143 ~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++++++.|.+++.|+|+++||..+..+.       
T Consensus        81 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  153 (276)
T PRK05875         81 TAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH-------  153 (276)
T ss_pred             HHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-------
Confidence            999999999999999753 345677888999999999999999999999999998778899999999877665       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+++|++++++++.
T Consensus       154 --------~~~~~Y~~sK~a~~~~~~~  172 (276)
T PRK05875        154 --------RWFGAYGVTKSAVDHLMKL  172 (276)
T ss_pred             --------CCCcchHHHHHHHHHHHHH
Confidence                    7788999999999999874

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.95  E-value=1.9e-26  Score=192.84  Aligned_cols=163  Identities=32%  Similarity=0.457  Sum_probs=138.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH--HHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA--ANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRF  138 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~  138 (249)
                      .+.+++++||||++|||+++|++|+++|++|+++.|+.+.  .+...+... . ..  . ..+.+..+|+++ .++++.+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~-~~--~-~~~~~~~~Dvs~~~~~v~~~   76 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E-AG--G-GRAAAVAADVSDDEESVEAL   76 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h-cC--C-CcEEEEEecCCCCHHHHHHH
Confidence            4678999999999999999999999999999888887654  333333332 1 00  0 257788899998 9999999


Q ss_pred             HHHHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++.+.+.+|++|++|||||.... .++.+.+.+++++++++|+.+++.+++.+.|.|+++   +||++||..+. +.   
T Consensus        77 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~---  149 (251)
T COG1028          77 VAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GG---  149 (251)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CC---
Confidence            99999999999999999999876 488899999999999999999999999888888843   99999999988 66   


Q ss_pred             cccccccccccCCC-cccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTS-LMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~-~~~Y~asKaal~~l~~~  248 (249)
                                  ++ ...|++||+|+++|++.
T Consensus       150 ------------~~~~~~Y~~sK~al~~~~~~  169 (251)
T COG1028         150 ------------PPGQAAYAASKAALIGLTKA  169 (251)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHH
Confidence                        55 59999999999999874

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3e-26  Score=192.00  Aligned_cols=165  Identities=33%  Similarity=0.438  Sum_probs=141.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++++++||||++|||.++|++|+++|++|++. .|+.+++++..+++...      +.++.++.+|++|++++.+++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~d~~~i~~~~   75 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN------GGKAFLIEADLNSIDGVKKLV   75 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCcEEEEEcCcCCHHHHHHHH
Confidence            34678999999999999999999999999998775 68877766666555431      136788999999999999999


Q ss_pred             HHHhccC------CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          140 EAWNGRL------GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       140 ~~~~~~~------g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +++.+.+      +++|++|||||....+++.+.+.+.++.++++|+.+++.+++.+++.|.+.  |++|++||..+..+
T Consensus        76 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~  153 (254)
T PRK12746         76 EQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLG  153 (254)
T ss_pred             HHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCC
Confidence            9998776      479999999998777777888999999999999999999999999998654  69999999988777


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               ++...|++||+|++++++.
T Consensus       154 ~---------------~~~~~Y~~sK~a~~~~~~~  173 (254)
T PRK12746        154 F---------------TGSIAYGLSKGALNTMTLP  173 (254)
T ss_pred             C---------------CCCcchHhhHHHHHHHHHH
Confidence            6               7888999999999998764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.95  E-value=3.1e-26  Score=190.55  Aligned_cols=163  Identities=25%  Similarity=0.343  Sum_probs=140.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||.++|++|+++|++|++++|+...   ..+++......  ...++.++.+|+++.++++++++++.+.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~---~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND---CAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEE   77 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999998541   11222221111  1246889999999999999999999999


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      ++++|++|||+|.....++.+.+.+++++++++|+.+++.+++.++|.|.+.+.++||++||..+..+.           
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------  146 (245)
T PRK12824         78 EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ-----------  146 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC-----------
Confidence            999999999999877777888899999999999999999999999999998778999999999888776           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ++...|++||+|+++|+|.
T Consensus       147 ----~~~~~Y~~sK~a~~~~~~~  165 (245)
T PRK12824        147 ----FGQTNYSAAKAGMIGFTKA  165 (245)
T ss_pred             ----CCChHHHHHHHHHHHHHHH
Confidence                7788999999999998864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.95  E-value=1.5e-26  Score=195.51  Aligned_cols=163  Identities=23%  Similarity=0.221  Sum_probs=131.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH----HHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV----VRFSE  140 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v----~~~~~  140 (249)
                      ++++||||++|||++++++|+++|++|++++| +++.+++..+++....     ..++.++.+|++|.+++    +++++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~d~~~~~~~~~~~~~   76 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-----PNSAVTCQADLSNSATLFSRCEAIID   76 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-----CCceEEEEccCCCchhhHHHHHHHHH
Confidence            57999999999999999999999999999865 4566666666654321     13567789999999855    55666


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHhchhhhcC------CCCeEE
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSK-----------DGYEEHMQVNHLAPALLSILLFPSLIRG------SPSRII  203 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~~g~Iv  203 (249)
                      ++.+.+|++|+||||||.....++.+.+.           +++++++++|+.+++.++++++|+|+++      ..+.|+
T Consensus        77 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv  156 (267)
T TIGR02685        77 ACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIV  156 (267)
T ss_pred             HHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEE
Confidence            66778899999999999865555444333           3589999999999999999999999643      246899


Q ss_pred             EEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          204 NVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       204 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +++|..+..+.               ++...|++||+|+++|++.
T Consensus       157 ~~~s~~~~~~~---------------~~~~~Y~asK~a~~~~~~~  186 (267)
T TIGR02685       157 NLCDAMTDQPL---------------LGFTMYTMAKHALEGLTRS  186 (267)
T ss_pred             EehhhhccCCC---------------cccchhHHHHHHHHHHHHH
Confidence            99999887666               7888999999999999874

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.95  E-value=2.8e-26  Score=191.84  Aligned_cols=157  Identities=25%  Similarity=0.352  Sum_probs=141.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.         +..      ...++.++++|+++.+++++++++
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~------~~~~~~~~~~D~~~~~~~~~~~~~   69 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ------EDYPFATFVLDVSDAAAVAQVCQR   69 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh------cCCceEEEEecCCCHHHHHHHHHH
Confidence            47789999999999999999999999999999999985         111      113678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||+|.....++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+.       
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~-------  142 (252)
T PRK08220         70 LLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR-------  142 (252)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC-------
Confidence            9999999999999999877777888899999999999999999999999999998888999999999877666       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+++++|++.
T Consensus       143 --------~~~~~Y~~sK~a~~~~~~~  161 (252)
T PRK08220        143 --------IGMAAYGASKAALTSLAKC  161 (252)
T ss_pred             --------CCCchhHHHHHHHHHHHHH
Confidence                    7788999999999999874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=4e-26  Score=190.64  Aligned_cols=168  Identities=24%  Similarity=0.338  Sum_probs=145.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC--CHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL--SLDSVVRF  138 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~  138 (249)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+..     ..++.++.+|++  +.++++++
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-----GPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-----CCCceEEEecccCCCHHHHHHH
Confidence            45789999999999999999999999999999999999988877776665521     135667777775  78999999


Q ss_pred             HHHHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.++++|++|||||.... .++.+.+.+.+++.+++|+.+++.++++++|+|.+++.++||++||..+..+.   
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---  159 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR---  159 (247)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC---
Confidence            99999989999999999997543 45667888999999999999999999999999998888999999999888776   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  +....|++||+|+++|++.
T Consensus       160 ------------~~~~~Y~~sK~a~~~~~~~  178 (247)
T PRK08945        160 ------------ANWGAYAVSKFATEGMMQV  178 (247)
T ss_pred             ------------CCCcccHHHHHHHHHHHHH
Confidence                        7788999999999998863

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.3e-26  Score=190.02  Aligned_cols=160  Identities=21%  Similarity=0.251  Sum_probs=141.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||.+++++|+++|++|++++|++++.++..+++....     ..++.++++|++|.++++++++++.+ 
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~-   75 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG-----AVAVSTHELDILDTASHAAFLDSLPA-   75 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc-----CCeEEEEecCCCChHHHHHHHHHHhh-
Confidence            689999999999999999999999999999999988877766665421     14788999999999999999998764 


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        ++|++|||+|.....+..+.+.+++.+.+++|+.+++.+++++.|+|.+++.|+||++||..+..+.           
T Consensus        76 --~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------  142 (243)
T PRK07102         76 --LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR-----------  142 (243)
T ss_pred             --cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC-----------
Confidence              4799999999876667778889999999999999999999999999998888999999999887776           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ++...|+++|+++++|++.
T Consensus       143 ----~~~~~Y~~sK~a~~~~~~~  161 (243)
T PRK07102        143 ----ASNYVYGSAKAALTAFLSG  161 (243)
T ss_pred             ----CCCcccHHHHHHHHHHHHH
Confidence                7778899999999999874

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=6.1e-28  Score=184.75  Aligned_cols=160  Identities=24%  Similarity=0.323  Sum_probs=141.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++.|+.+++||+..|||+++++.|++.|+.|+.+.|+++.+....+++..         -+.-+..|+++.+.+.+.+.
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~---------~I~Pi~~Dls~wea~~~~l~   73 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS---------LIIPIVGDLSAWEALFKLLV   73 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc---------ceeeeEecccHHHHHHHhhc
Confidence            357899999999999999999999999999999999999998888766432         47778899999877766554


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      .    .+++|.+|||||+....++.+.+.+.+++.|++|+.+++.++|.+...+..+ ..|.|||+||.++.++.     
T Consensus        74 ~----v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~-----  144 (245)
T KOG1207|consen   74 P----VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPL-----  144 (245)
T ss_pred             c----cCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccccc-----
Confidence            4    4789999999999988899999999999999999999999999988777765 47899999999999888     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                .....||++|+|+++++|.
T Consensus       145 ----------~nHtvYcatKaALDmlTk~  163 (245)
T KOG1207|consen  145 ----------DNHTVYCATKAALDMLTKC  163 (245)
T ss_pred             ----------CCceEEeecHHHHHHHHHH
Confidence                      8899999999999999873

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.95  E-value=5e-26  Score=188.98  Aligned_cols=162  Identities=25%  Similarity=0.311  Sum_probs=142.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      |+++||||++|||+++|++|+++|++|+++.| +++..++..+++...      ..++.++.+|++|+++++++++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL------GFDFRVVEGDVSSFESCKAAVAKVEA   74 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999888 555555554444321      14688999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      .++++|++|||+|......+.+.+.+++++.+++|+.+++.++++++|.|++.+.++||++||..+..+.          
T Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------  144 (242)
T TIGR01829        75 ELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ----------  144 (242)
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC----------
Confidence            8899999999999877667788899999999999999999999999999998888899999999888776          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++...|+++|+++.+|+++
T Consensus       145 -----~~~~~y~~sk~a~~~~~~~  163 (242)
T TIGR01829       145 -----FGQTNYSAAKAGMIGFTKA  163 (242)
T ss_pred             -----CCcchhHHHHHHHHHHHHH
Confidence                 7788999999999988764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.7e-26  Score=190.04  Aligned_cols=163  Identities=25%  Similarity=0.288  Sum_probs=136.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +++++||||++|||.++|++|+++|++|++.++ +++..++..+++.+.      +.++.++.+|++|.++++++++++.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ------GGEALAVAADVADEADVLRLFEAVD   75 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC------CCcEEEEEeccCCHHHHHHHHHHHH
Confidence            578999999999999999999999999988874 445555554444431      1357889999999999999999999


Q ss_pred             ccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC---CCCeEEEEcCCccccCCCCccc
Q 025705          144 GRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG---SPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       144 ~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~---~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +.++++|++|||||.... .++.+.+.+++++++++|+.+++.+++++++.|.++   ++|+||++||..+..+.     
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----  150 (248)
T PRK06123         76 RELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS-----  150 (248)
T ss_pred             HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC-----
Confidence            999999999999998643 356778899999999999999999999999999764   25799999999888776     


Q ss_pred             cccccccccCCC-cccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTS-LMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~-~~~Y~asKaal~~l~~~  248 (249)
                                ++ ...|++||+++++|++.
T Consensus       151 ----------~~~~~~Y~~sKaa~~~~~~~  170 (248)
T PRK06123        151 ----------PGEYIDYAASKGAIDTMTIG  170 (248)
T ss_pred             ----------CCCccchHHHHHHHHHHHHH
Confidence                      44 35799999999998863

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.95  E-value=6e-26  Score=189.41  Aligned_cols=166  Identities=28%  Similarity=0.369  Sum_probs=147.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+.+++++||||+++||++++++|+++|++|++++|+.+++.+..+++.+.      +.++.++.+|++|.+++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA------GGKARARQVDVRDRAALKAAVAA   76 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999999988777766666542      13588899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~  220 (249)
                      +.++++++|++|||+|.....++.+.+.+++++.+++|+.+++.+.+.++|.|.+++.++||++||..+. .+.      
T Consensus        77 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~------  150 (251)
T PRK12826         77 GVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY------  150 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC------
Confidence            9999999999999999887777778899999999999999999999999999988878899999999877 454      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|++++++++.
T Consensus       151 ---------~~~~~y~~sK~a~~~~~~~  169 (251)
T PRK12826        151 ---------PGLAHYAASKAGLVGFTRA  169 (251)
T ss_pred             ---------CCccHHHHHHHHHHHHHHH
Confidence                     6778899999999998864

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.95  E-value=4e-26  Score=189.58  Aligned_cols=160  Identities=22%  Similarity=0.242  Sum_probs=138.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ++||||++|||+++|++|+++|++|++++|+ .+.++...+++.+.      +.++.++.+|++|.++++++++++.+.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ------GGNARLLQFDVADRVACRTLLEADIAEH   74 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc------CCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999998875 44555555555542      1468899999999999999999998889


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhc-hhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLF-PSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l-~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      +++|++|||+|.....++.+.+.++++.++++|+.+++.++++++ |.+.+++.|+||++||..+..+.           
T Consensus        75 ~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------  143 (239)
T TIGR01831        75 GAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN-----------  143 (239)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC-----------
Confidence            999999999998776677788999999999999999999999875 55555667899999999998887           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ++...|+++|+|++++++.
T Consensus       144 ----~~~~~Y~~sK~a~~~~~~~  162 (239)
T TIGR01831       144 ----RGQVNYSAAKAGLIGATKA  162 (239)
T ss_pred             ----CCCcchHHHHHHHHHHHHH
Confidence                7888999999999998874

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.4e-26  Score=188.99  Aligned_cols=166  Identities=22%  Similarity=0.307  Sum_probs=141.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC----hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN----LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ++++++++||||++|||+++|++|+++|++|++++|.    .+..++..+++..    .  +.++.++.+|+++.+++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~Dl~~~~~~~~   76 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA----A--GGKALGLAFDVRDFAATRA   76 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh----c--CCcEEEEEccCCCHHHHHH
Confidence            4567899999999999999999999999999997764    3333333333332    1  2468899999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhc-hhhhcCCCCeEEEEcCCccccCCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLF-PSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l-~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++++. +.|.+.+.++||++||..+..+.  
T Consensus        77 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--  154 (249)
T PRK12827         77 ALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN--  154 (249)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC--
Confidence            999999888999999999998877778888999999999999999999999999 66666667899999999988876  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|+++|++++++++.
T Consensus       155 -------------~~~~~y~~sK~a~~~~~~~  173 (249)
T PRK12827        155 -------------RGQVNYAASKAGLIGLTKT  173 (249)
T ss_pred             -------------CCCchhHHHHHHHHHHHHH
Confidence                         7788999999999988764

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.7e-26  Score=190.93  Aligned_cols=162  Identities=28%  Similarity=0.385  Sum_probs=143.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++++||||++|||++++++|+++|++|++++|++++.++..+++...      +.++.++.+|++|.++++++++++.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~   74 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH------GGEALVVPTDVSDAEACERLIEAAVA   74 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999988777766665441      23688899999999999999999998


Q ss_pred             cCCCccEEEeccccCCCCCCCCC-CHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKF-SKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +++++|++|||||......+.+. +.+++++.+++|+.+++.+.+.+.|+|.++ .|+||++||..++.+.         
T Consensus        75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~---------  144 (263)
T PRK06181         75 RFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGV---------  144 (263)
T ss_pred             HcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCC---------
Confidence            89999999999998776677777 899999999999999999999999998765 4899999999888776         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|+++|++++++++.
T Consensus       145 ------~~~~~Y~~sK~~~~~~~~~  163 (263)
T PRK06181        145 ------PTRSGYAASKHALHGFFDS  163 (263)
T ss_pred             ------CCccHHHHHHHHHHHHHHH
Confidence                  7788999999999999864

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.94  E-value=8.1e-26  Score=188.72  Aligned_cols=164  Identities=24%  Similarity=0.255  Sum_probs=138.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE-cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~-r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|+++||||++|||.++|+.|+++|++|+++. |+++.+++..+++...      +.++.++.||+++.++++++++++.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA------GGRACVVAGDVANEADVIAMFDAVQ   75 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCcEEEEEeccCCHHHHHHHHHHHH
Confidence            37899999999999999999999999998764 6666666666666441      2468899999999999999999999


Q ss_pred             ccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC---CCeEEEEcCCccccCCCCccc
Q 025705          144 GRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS---PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       144 ~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +.++++|++|||||.... .++.+.+.+++++++++|+.+++.+++.+++.|..++   .|+||++||..+..+.+    
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----  151 (248)
T PRK06947         76 SAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP----  151 (248)
T ss_pred             HhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC----
Confidence            888999999999998643 4567788999999999999999999999999987653   57899999998887751    


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ..+..|++||+++++|++.
T Consensus       152 ----------~~~~~Y~~sK~~~~~~~~~  170 (248)
T PRK06947        152 ----------NEYVDYAGSKGAVDTLTLG  170 (248)
T ss_pred             ----------CCCcccHhhHHHHHHHHHH
Confidence                      2356799999999998864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=8.7e-26  Score=187.97  Aligned_cols=166  Identities=31%  Similarity=0.437  Sum_probs=147.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++.+|+++||||+++||.+++++|+++|++|+++ +|+.+..++..+++...      +.++.++.+|++|.++++++++
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   75 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE------GGDAIAVKADVSSEEDVENLVE   75 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHH
Confidence            3667999999999999999999999999999998 99887777666665541      2468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.      
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~------  149 (247)
T PRK05565         76 QIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA------  149 (247)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC------
Confidence            99988899999999999876666778899999999999999999999999999998888999999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|+++|++++.++++
T Consensus       150 ---------~~~~~y~~sK~a~~~~~~~  168 (247)
T PRK05565        150 ---------SCEVLYSASKGAVNAFTKA  168 (247)
T ss_pred             ---------CCccHHHHHHHHHHHHHHH
Confidence                     7778899999999998764

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.9e-26  Score=186.87  Aligned_cols=163  Identities=23%  Similarity=0.313  Sum_probs=144.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+++++||||+|+||.+++++|+++|++|++++|+++++++..+++.+.       .++.++.+|+++.++++++++++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~D~~~~~~~~~~~~~~   76 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-------GNVLGLAADVRDEADVQRAVDAI   76 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-------CcEEEEEccCCCHHHHHHHHHHH
Confidence            56799999999999999999999999999999999988877776666531       36888999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.++++|++|||+|....+++.+.+.+++++++++|+.+++.+++++++.| +++.|+||++||..+..+.        
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~--------  147 (237)
T PRK07326         77 VAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFF--------  147 (237)
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCC--------
Confidence            9888999999999998776777888999999999999999999999999998 4445899999999877665        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|+++|+++.++++.
T Consensus       148 -------~~~~~y~~sk~a~~~~~~~  166 (237)
T PRK07326        148 -------AGGAAYNASKFGLVGFSEA  166 (237)
T ss_pred             -------CCCchHHHHHHHHHHHHHH
Confidence                   6778899999999998874

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.4e-26  Score=187.05  Aligned_cols=164  Identities=22%  Similarity=0.283  Sum_probs=144.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||+++||.+++++|+++|++|++++|++++..+..+++..        ..+..+.+|++|.+++++++++
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~   75 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA--------DALRIGGIDLVDPQAARRAVDE   75 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh--------cCceEEEeecCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999998777666555543        2356778999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++||++|........+.+.+.+++.+++|+.+++.+++++++.|.+++.++||++||..++.+.       
T Consensus        76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  148 (239)
T PRK12828         76 VNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-------  148 (239)
T ss_pred             HHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-------
Confidence            9999999999999999876566677789999999999999999999999999988878999999999887766       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+++|+++++++++
T Consensus       149 --------~~~~~y~~sk~a~~~~~~~  167 (239)
T PRK12828        149 --------PGMGAYAAAKAGVARLTEA  167 (239)
T ss_pred             --------CCcchhHHHHHHHHHHHHH
Confidence                    7788999999999888763

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=9.6e-26  Score=189.03  Aligned_cols=163  Identities=21%  Similarity=0.248  Sum_probs=139.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|+++||||++|||.++|++|+++|++|++++|+. +..++..+++...      ..++.++.+|+++++++.++++++.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   75 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL------GVEVIFFPADVADLSAHEAMLDAAQ   75 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc------CCceEEEEecCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999874 3444444444321      1368899999999999999999999


Q ss_pred             ccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC------CCeEEEEcCCccccCCC
Q 025705          144 GRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS------PSRIINVNSVMHYVGFV  215 (249)
Q Consensus       144 ~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~------~g~Iv~vsS~~~~~~~~  215 (249)
                      +.++++|++|||||...  ..++.+.+.+.+++.+++|+.+++.+++++++.|.+++      .++||++||..+..+. 
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-  154 (256)
T PRK12745         76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS-  154 (256)
T ss_pred             HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC-
Confidence            99999999999999753  24567788999999999999999999999999998754      3579999999988877 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+++++|++.
T Consensus       155 --------------~~~~~Y~~sK~a~~~~~~~  173 (256)
T PRK12745        155 --------------PNRGEYCISKAGLSMAAQL  173 (256)
T ss_pred             --------------CCCcccHHHHHHHHHHHHH
Confidence                          7788999999999998874

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.94  E-value=2.4e-26  Score=191.50  Aligned_cols=153  Identities=31%  Similarity=0.484  Sum_probs=138.6

Q ss_pred             CCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC-CC
Q 025705           72 GST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL-GP  148 (249)
Q Consensus        72 Gas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-g~  148 (249)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.++.+.     +  ++.+|++++++++++++++.+.+ |+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~-----~--~~~~D~~~~~~v~~~~~~~~~~~~g~   73 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA-----E--VIQCDLSDEESVEALFDEAVERFGGR   73 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS-----E--EEESCTTSHHHHHHHHHHHHHHHCSS
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC-----c--eEeecCcchHHHHHHHHHHHhhcCCC
Confidence            566  99999999999999999999999999988888888876532     3  59999999999999999999999 99


Q ss_pred             ccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          149 LHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       149 id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      +|++|||+|....    .++.+.+.++|++.+++|+.+++.++|+++|+|.++  |+||++||..+..+.          
T Consensus        74 iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~----------  141 (241)
T PF13561_consen   74 IDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPM----------  141 (241)
T ss_dssp             ESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBS----------
T ss_pred             eEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccC----------
Confidence            9999999998765    677888999999999999999999999999988775  799999999888776          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           +++..|+++|+|+++|+|.
T Consensus       142 -----~~~~~y~~sKaal~~l~r~  160 (241)
T PF13561_consen  142 -----PGYSAYSASKAALEGLTRS  160 (241)
T ss_dssp             -----TTTHHHHHHHHHHHHHHHH
T ss_pred             -----ccchhhHHHHHHHHHHHHH
Confidence                 8888999999999999985

...

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=1.9e-25  Score=186.70  Aligned_cols=164  Identities=25%  Similarity=0.287  Sum_probs=140.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++++++||||++|||.+++++|+++|++|++..|+ .+...+..+.+.+.      +.++.++.+|+++.++++++++
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   76 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN------GGEGIGVLADVSTREGCETLAK   76 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc------CCeeEEEEeccCCHHHHHHHHH
Confidence            4568999999999999999999999999999887654 44444444444431      1357788999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.+.+++.+++|+.+++.+++++.|.|.+.  |+||++||..++.+.      
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~------  148 (252)
T PRK06077         77 ATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPA------  148 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCC------
Confidence            999999999999999998777777788889999999999999999999999998763  799999999988776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||++++++++.
T Consensus       149 ---------~~~~~Y~~sK~~~~~~~~~  167 (252)
T PRK06077        149 ---------YGLSIYGAMKAAVINLTKY  167 (252)
T ss_pred             ---------CCchHHHHHHHHHHHHHHH
Confidence                     7889999999999999874

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.1e-25  Score=186.29  Aligned_cols=164  Identities=24%  Similarity=0.317  Sum_probs=140.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++++++||||++|||.++++.|+++|++|++++|+++++++..+++...      +.++..+.+|+++.++++++++.+
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~   76 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL------GTEVRGYAANVTDEEDVEATFAQI   76 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHHHHHH
Confidence            67899999999999999999999999999999999998887777766542      246788999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCC---------CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCcccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEP---------QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYV  212 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~---------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~  212 (249)
                      .+.++++|++|||||.......         .+.+.+.++.++++|+.+++.+.+.++|.|.++ ..|.|+++||.. ..
T Consensus        77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~  155 (253)
T PRK08217         77 AEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RA  155 (253)
T ss_pred             HHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-cc
Confidence            8888899999999997543222         566889999999999999999999999999865 457899999864 34


Q ss_pred             CCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          213 GFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +.               ++...|++||+|++++++.
T Consensus       156 ~~---------------~~~~~Y~~sK~a~~~l~~~  176 (253)
T PRK08217        156 GN---------------MGQTNYSASKAGVAAMTVT  176 (253)
T ss_pred             CC---------------CCCchhHHHHHHHHHHHHH
Confidence            44               6778999999999999764

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.3e-25  Score=190.82  Aligned_cols=166  Identities=23%  Similarity=0.258  Sum_probs=129.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++++++ +
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~i~~~~~~~-~   72 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA------GFDVSTQEVDVSSRESVKALAATA-Q   72 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEeecCCHHHHHHHHHHH-H
Confidence            589999998 699999999997 8999999999988877777666541      246888999999999999999988 4


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC-C-------
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV-D-------  216 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~-~-------  216 (249)
                      .++++|++|||||+..       ..+++++++++|+.+++.++++++|+|.++  |++|++||.++..+.. .       
T Consensus        73 ~~g~id~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~  143 (275)
T PRK06940         73 TLGPVTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERAL  143 (275)
T ss_pred             hcCCCCEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhccc
Confidence            5789999999999742       236799999999999999999999999754  6889999998875420 0       


Q ss_pred             ----ccccccc---cccccCCCcccchhhHHHHHhhhhc
Q 025705          217 ----TEDMNVV---SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ----~~~~~~~---~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          .+++...   +.....++...|++||+|+.+|+|.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~  182 (275)
T PRK06940        144 ATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMA  182 (275)
T ss_pred             cccccccccccccccccccCCccchhHHHHHHHHHHHHH
Confidence                0000000   0000003567899999999999874

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.1e-25  Score=187.31  Aligned_cols=160  Identities=20%  Similarity=0.276  Sum_probs=140.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..        .++..+.+|++|.+++.+.++++.+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~   73 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD--------ARFVPVACDLTDAASLAAALANAAA   73 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--------CceEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998877766655521        3678899999999999999999998


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      +++++|++|||+|.....++.+.+.+++++.+++|+.+++.+.+++++.|.+++.|+||++||..+..+           
T Consensus        74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------  142 (257)
T PRK07074         74 ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-----------  142 (257)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-----------
Confidence            889999999999987666777788999999999999999999999999999888899999999765432           


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           .+...|+++|+|++++++.
T Consensus       143 -----~~~~~y~~sK~a~~~~~~~  161 (257)
T PRK07074        143 -----LGHPAYSAAKAGLIHYTKL  161 (257)
T ss_pred             -----CCCcccHHHHHHHHHHHHH
Confidence                 3456899999999998874

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-25  Score=187.50  Aligned_cols=153  Identities=24%  Similarity=0.220  Sum_probs=130.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||++|||+++|++|+++|++|++++|+++++++..++    .      .++.++.+|++|.++++++++++.. 
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~------~~~~~~~~D~~~~~~~~~~~~~~~~-   70 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----S------ANIFTLAFDVTDHPGTKAALSQLPF-   70 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----c------CCCeEEEeeCCCHHHHHHHHHhccc-
Confidence            6899999999999999999999999999999998766554322    1      2577889999999999999888643 


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        .+|.+|||||.....+..+.+.+++++++++|+.++++++++++|+|.+  .++||++||..+..+.           
T Consensus        71 --~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~-----------  135 (240)
T PRK06101         71 --IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELAL-----------  135 (240)
T ss_pred             --CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCC-----------
Confidence              4799999999754444456788999999999999999999999999964  3689999999888776           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ++...|++||+++++|++.
T Consensus       136 ----~~~~~Y~asK~a~~~~~~~  154 (240)
T PRK06101        136 ----PRAEAYGASKAAVAYFART  154 (240)
T ss_pred             ----CCCchhhHHHHHHHHHHHH
Confidence                7888999999999999863

>PRK12742 oxidoreductase; Provisional

Probab=99.94  E-value=3e-25  Score=183.95  Aligned_cols=155  Identities=26%  Similarity=0.350  Sum_probs=128.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++|+++||||++|||+++|++|+++|++|++++++ .+..++..++.           .+.++.+|++|.+++.++++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----------~~~~~~~D~~~~~~~~~~~~   71 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----------GATAVQTDSADRDAVIDVVR   71 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----------CCeEEecCCCCHHHHHHHHH
Confidence            4678999999999999999999999999999888764 44443332221           24567899999998887775


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~~~~  219 (249)
                      +    ++++|++|||||.....+..+.+.+++++++++|+.+++.+++.++++|.+  .|+||++||..+. .+.     
T Consensus        72 ~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~-----  140 (237)
T PRK12742         72 K----SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPV-----  140 (237)
T ss_pred             H----hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCC-----
Confidence            4    478999999999876667778899999999999999999999999999864  4799999998764 333     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|+++++++++
T Consensus       141 ----------~~~~~Y~~sKaa~~~~~~~  159 (237)
T PRK12742        141 ----------AGMAAYAASKSALQGMARG  159 (237)
T ss_pred             ----------CCCcchHHhHHHHHHHHHH
Confidence                      6788999999999999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.8e-25  Score=184.34  Aligned_cols=146  Identities=15%  Similarity=0.129  Sum_probs=121.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .++||||++|||+++|++|+++|++|++++|+.+++++..+++           ++.++.+|++|+++++++++++.+  
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~~~~~~~~--   68 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----------DVDAIVCDNTDPASLEEARGLFPH--   68 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----------cCcEEecCCCCHHHHHHHHHHHhh--
Confidence            4899999999999999999999999999999987776554432           245788999999999999887753  


Q ss_pred             CCccEEEeccccCCC--C----CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          147 GPLHVLINNAGIFSI--G----EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       147 g~id~linnag~~~~--~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                       ++|++|||||....  .    ++.+ +.++|++++++|+.++++++++++|.|.+  .|+||++||.+    .      
T Consensus        69 -~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~------  134 (223)
T PRK05884         69 -HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----P------  134 (223)
T ss_pred             -cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----C------
Confidence             69999999985321  1    2233 56899999999999999999999999965  48999999965    2      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|++||+|+++|+|.
T Consensus       135 ---------~~~~~Y~asKaal~~~~~~  153 (223)
T PRK05884        135 ---------PAGSAEAAIKAALSNWTAG  153 (223)
T ss_pred             ---------CCccccHHHHHHHHHHHHH
Confidence                     4567899999999999874

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=3.5e-27  Score=180.48  Aligned_cols=161  Identities=25%  Similarity=0.269  Sum_probs=143.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..+|-+++||||.+|+|++.|++|+++|+.|++.|-...+.++.++++.         .++.+.++|++++++++..+..
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg---------~~~vf~padvtsekdv~aala~   76 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG---------GKVVFTPADVTSEKDVRAALAK   76 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC---------CceEEeccccCcHHHHHHHHHH
Confidence            4678899999999999999999999999999999998888888877754         4899999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCC------CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC------CCCeEEEEcCCc
Q 025705          142 WNGRLGPLHVLINNAGIFSIG------EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG------SPSRIINVNSVM  209 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~~g~Iv~vsS~~  209 (249)
                      .+.+||++|.+|||||+....      .-...+.|++++.+++|++|+|++++.....|-++      ++|.|||..|++
T Consensus        77 ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasva  156 (260)
T KOG1199|consen   77 AKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVA  156 (260)
T ss_pred             HHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceee
Confidence            999999999999999986422      12345789999999999999999999998888653      478999999999


Q ss_pred             cccCCCCccccccccccccCCCcccchhhHHHHHhhh
Q 025705          210 HYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~  246 (249)
                      ++-+-               .++++|++||.|+.+|+
T Consensus       157 afdgq---------------~gqaaysaskgaivgmt  178 (260)
T KOG1199|consen  157 AFDGQ---------------TGQAAYSASKGAIVGMT  178 (260)
T ss_pred             eecCc---------------cchhhhhcccCceEeee
Confidence            99887               89999999999999876

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.94  E-value=5.1e-25  Score=184.34  Aligned_cols=163  Identities=24%  Similarity=0.291  Sum_probs=144.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|++|||||+++||++++++|+++|++|++++|+.+..++..+++...      ..++..+.+|++|.++++++++++.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA------GGSVIYLVADVTKEDEIADMIAAAAA   74 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999988777766655431      14688899999999999999999998


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      .++++|++|||||.....+..+.+.+++++++++|+.+++.+++.+++.|.+.+.+++|++||..+..+.          
T Consensus        75 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~----------  144 (255)
T TIGR01963        75 EFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS----------  144 (255)
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC----------
Confidence            8889999999999876666677788999999999999999999999999988878899999998877776          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           +....|+++|++++++++.
T Consensus       145 -----~~~~~y~~sk~a~~~~~~~  163 (255)
T TIGR01963       145 -----PFKSAYVAAKHGLIGLTKV  163 (255)
T ss_pred             -----CCCchhHHHHHHHHHHHHH
Confidence                 7778999999999998863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.3e-25  Score=185.90  Aligned_cols=157  Identities=24%  Similarity=0.280  Sum_probs=136.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++++||||++|||++++++|+++|++|++++|+.+.+++..+.+...      ..++.++.+|++|.++++++++    
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~----   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR------GLALRVEKLDLTDAIDRAQAAE----   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcceEEEeeCCCHHHHHHHhc----
Confidence            578999999999999999999999999999999987766655544331      1357888999999998877643    


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                        +++|++|||||....++..+.+.+.+++.+++|+.+++.+++.+++.|.+.+.|+||++||..+..+.          
T Consensus        72 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----------  139 (257)
T PRK09291         72 --WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG----------  139 (257)
T ss_pred             --CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC----------
Confidence              37999999999887778888999999999999999999999999999998877999999999887766          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++...|++||++++++++.
T Consensus       140 -----~~~~~Y~~sK~a~~~~~~~  158 (257)
T PRK09291        140 -----PFTGAYCASKHALEAIAEA  158 (257)
T ss_pred             -----CCcchhHHHHHHHHHHHHH
Confidence                 7788999999999998763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.94  E-value=6e-25  Score=182.57  Aligned_cols=166  Identities=28%  Similarity=0.377  Sum_probs=146.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++.+++++||||+++||.+++++|+++|++|++++|++++.+...+++...      +.++.++.+|++|++++.+++++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   75 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA------GGEARVLVFDVSDEAAVRALIEA   75 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999988877766665531      24688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||+|.....+..+.+.+++++.++.|+.+++.++++++|+|.+.+.++||++||..+..+.       
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~-------  148 (246)
T PRK05653         76 AVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN-------  148 (246)
T ss_pred             HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC-------
Confidence            9888899999999999876667778899999999999999999999999999988777899999998877665       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+.+|++++.+++.
T Consensus       149 --------~~~~~y~~sk~~~~~~~~~  167 (246)
T PRK05653        149 --------PGQTNYSAAKAGVIGFTKA  167 (246)
T ss_pred             --------CCCcHhHhHHHHHHHHHHH
Confidence                    6778899999999988764

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5.9e-25  Score=184.94  Aligned_cols=164  Identities=30%  Similarity=0.392  Sum_probs=142.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++++++||||+++||++++++|+++|++|++++|+.+.+++..++..+        .++.++.+|++|++++++++++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~   79 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG--------AKVTATVADVADPAQVERVFDT   79 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------CceEEEEccCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999998766655444322        2568889999999999999999


Q ss_pred             HhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcCCccccCCCCccc
Q 025705          142 WNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       142 ~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +.+.++++|++|||||.. ......+.+.+.+++++++|+.+++.+++.+++.|.+.+. ++|+++||..+..+.     
T Consensus        80 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~-----  154 (264)
T PRK12829         80 AVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY-----  154 (264)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC-----
Confidence            999889999999999987 4556677889999999999999999999999999887665 789999998877776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|++++++++.
T Consensus       155 ----------~~~~~y~~~K~a~~~~~~~  173 (264)
T PRK12829        155 ----------PGRTPYAASKWAVVGLVKS  173 (264)
T ss_pred             ----------CCCchhHHHHHHHHHHHHH
Confidence                      7778899999999988763

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-25  Score=186.50  Aligned_cols=159  Identities=26%  Similarity=0.333  Sum_probs=132.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      |+++||||++|||+++|++|+++|++|++++|++ +.+++.    .+..     ..++.++.+|+++.++++++++++.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQY-----NSNLTFHSLDLQDVHELETNFNEILS   72 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----Hhcc-----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999986 333222    2211     13678899999999999999999877


Q ss_pred             cCCC--c--cEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCcc
Q 025705          145 RLGP--L--HVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       145 ~~g~--i--d~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      .++.  +  +++|+|||... ..++.+.+.+++++.+++|+.+++.+++.++|+|++. ..|+||++||..+..+.    
T Consensus        73 ~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  148 (251)
T PRK06924         73 SIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY----  148 (251)
T ss_pred             hcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC----
Confidence            6543  2  28999999754 3567788999999999999999999999999999875 45799999998877665    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|+++|+|+++|+|.
T Consensus       149 -----------~~~~~Y~~sKaa~~~~~~~  167 (251)
T PRK06924        149 -----------FGWSAYCSSKAGLDMFTQT  167 (251)
T ss_pred             -----------CCcHHHhHHHHHHHHHHHH
Confidence                       7888999999999999873

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=1.2e-24  Score=180.97  Aligned_cols=166  Identities=25%  Similarity=0.365  Sum_probs=143.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++++++||||+++||.+++++|+++|++|+++.|+.++ .++..+++...      ..++..+.+|+++.+++.++++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~   75 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL------GGKALAVQGDVSDAESVERAVD   75 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHHHH
Confidence            3567899999999999999999999999999888877653 44444444331      2468889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....+..+.+.+.+++.+++|+.+++.+.+.+++.+.+.+.+++|++||..+..+.      
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~------  149 (248)
T PRK05557         76 EAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN------  149 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC------
Confidence            99988899999999999877667777889999999999999999999999999988777899999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|+++++++++
T Consensus       150 ---------~~~~~y~~sk~a~~~~~~~  168 (248)
T PRK05557        150 ---------PGQANYAASKAGVIGFTKS  168 (248)
T ss_pred             ---------CCCchhHHHHHHHHHHHHH
Confidence                     7788999999999988764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.93  E-value=9.7e-25  Score=181.78  Aligned_cols=162  Identities=27%  Similarity=0.300  Sum_probs=138.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEE-EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil-~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ++++||||++|||.+++++|+++|++|++ ..|+.++.++...++...      +.++..+.+|++|+++++++++++.+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~d~~~i~~~~~~~~~   75 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA------GGKAFVLQADISDENQVVAMFTAIDQ   75 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC------CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999977 467777766666665441      23678899999999999999999998


Q ss_pred             cCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC---CCCeEEEEcCCccccCCCCcccc
Q 025705          145 RLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG---SPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       145 ~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~---~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      .++++|++|||||.. ...+..+.+.++++..+++|+.+++.+++.+++.|.++   +.|+||++||..+..+.      
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~------  149 (247)
T PRK09730         76 HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA------  149 (247)
T ss_pred             hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC------
Confidence            899999999999975 34556778899999999999999999999999999875   35789999999888775      


Q ss_pred             ccccccccCCC-cccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTS-LMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~-~~~Y~asKaal~~l~~~  248 (249)
                               ++ ...|+++|++++++++.
T Consensus       150 ---------~~~~~~Y~~sK~~~~~~~~~  169 (247)
T PRK09730        150 ---------PGEYVDYAASKGAIDTLTTG  169 (247)
T ss_pred             ---------CCcccchHhHHHHHHHHHHH
Confidence                     43 45799999999998863

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.8e-25  Score=185.15  Aligned_cols=151  Identities=25%  Similarity=0.293  Sum_probs=129.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||.+++++|+++|++|++++|+....      .         ..++..+.+|++++      +++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~---------~~~~~~~~~D~~~~------~~~   60 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L---------SGNFHFLQLDLSDD------LEP   60 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c---------CCcEEEEECChHHH------HHH
Confidence            46789999999999999999999999999999999985321      0         13578889999987      344


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|++++.|+||++||..+..+.      
T Consensus        61 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  134 (235)
T PRK06550         61 LFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG------  134 (235)
T ss_pred             HHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------
Confidence            4445689999999999753 346678899999999999999999999999999998888999999999988776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|++++++++.
T Consensus       135 ---------~~~~~Y~~sK~a~~~~~~~  153 (235)
T PRK06550        135 ---------GGGAAYTASKHALAGFTKQ  153 (235)
T ss_pred             ---------CCCcccHHHHHHHHHHHHH
Confidence                     7788999999999998874

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=1.2e-24  Score=181.31  Aligned_cols=165  Identities=24%  Similarity=0.302  Sum_probs=138.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..+++++||||+++||++++++|+++|++|++++|+. +..+...+++....     ...+.++.+|++|.+++.+++++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~   78 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-----PGSAAALQADLLDPDALPELVAA   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-----CCceEEEEcCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999864 34444444443321     13578889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.++++.++++|+.+++.+.+++.|.|.++ .|.+++++|..+..+.       
T Consensus        79 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------  150 (249)
T PRK09135         79 CVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPL-------  150 (249)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCC-------
Confidence            99999999999999998766677777889999999999999999999999998765 4789988886655444       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||++++++++.
T Consensus       151 --------~~~~~Y~~sK~~~~~~~~~  169 (249)
T PRK09135        151 --------KGYPVYCAAKAALEMLTRS  169 (249)
T ss_pred             --------CCchhHHHHHHHHHHHHHH
Confidence                    7888999999999998864

>PRK08324 short chain dehydrogenase; Validated

Probab=99.93  E-value=6.8e-25  Score=207.56  Aligned_cols=168  Identities=21%  Similarity=0.236  Sum_probs=150.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ....+.||+++||||+||||+++|++|+++|++|++++|+.+.++...+++...       .++.++.+|++|.++++++
T Consensus       416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-------~~v~~v~~Dvtd~~~v~~~  488 (681)
T PRK08324        416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-------DRALGVACDVTDEAAVQAA  488 (681)
T ss_pred             CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-------CcEEEEEecCCCHHHHHHH
Confidence            334578999999999999999999999999999999999998877776655431       3678899999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.+|++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+++.|++++. |+||++||..+..+.   
T Consensus       489 ~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~---  565 (681)
T PRK08324        489 FEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG---  565 (681)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC---
Confidence            9999998999999999999988788888999999999999999999999999999998764 899999999888776   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||++++++++.
T Consensus       566 ------------~~~~~Y~asKaa~~~l~~~  584 (681)
T PRK08324        566 ------------PNFGAYGAAKAAELHLVRQ  584 (681)
T ss_pred             ------------CCcHHHHHHHHHHHHHHHH
Confidence                        7889999999999999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=7.8e-25  Score=198.26  Aligned_cols=163  Identities=28%  Similarity=0.382  Sum_probs=139.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++++++||||++|||+++|++|+++|++|++++++...  +..+++.+..       ....+.+|++|.++++++++.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~-------~~~~~~~Dv~~~~~~~~~~~~  277 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRV-------GGTALALDITAPDAPARIAEH  277 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHc-------CCeEEEEeCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999885321  1122222211       235678999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||+.....+.+.+.+.|++++++|+.+++.+.+++++.+..++.|+||++||..+..+.       
T Consensus       278 ~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-------  350 (450)
T PRK08261        278 LAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-------  350 (450)
T ss_pred             HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-------
Confidence            9998999999999999887777888999999999999999999999999997665667899999999988877       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              +++..|+++|+++++|++.
T Consensus       351 --------~~~~~Y~asKaal~~~~~~  369 (450)
T PRK08261        351 --------RGQTNYAASKAGVIGLVQA  369 (450)
T ss_pred             --------CCChHHHHHHHHHHHHHHH
Confidence                    7889999999999999864

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=2.7e-24  Score=178.80  Aligned_cols=165  Identities=28%  Similarity=0.400  Sum_probs=141.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++.++++||||+++||++++++|+++|++|+++.|+.++ .+...+.+...      ..++.++.+|+++.++++++++
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~   76 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL------GRRAQAVQADVTDKAALEAAVA   76 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc------CCceEEEECCcCCHHHHHHHHH
Confidence            3456899999999999999999999999998887766543 33333333321      1468889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+++++.+.+.+++|++||..+..+.      
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~------  150 (249)
T PRK12825         77 AAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW------  150 (249)
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC------
Confidence            99888899999999999877777778899999999999999999999999999988878899999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhh
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                               ++...|+.+|++++++++
T Consensus       151 ---------~~~~~y~~sK~~~~~~~~  168 (249)
T PRK12825        151 ---------PGRSNYAAAKAGLVGLTK  168 (249)
T ss_pred             ---------CCchHHHHHHHHHHHHHH
Confidence                     678889999999999886

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.9e-24  Score=179.89  Aligned_cols=157  Identities=31%  Similarity=0.407  Sum_probs=135.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++||||++|||.++++.|+++|++|++++|+.+++++..++.           .+.++.+|+++.++++++++.
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~~~~~   74 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----------GCEPLRLDVGDDAAIRAALAA   74 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------CCeEEEecCCCHHHHHHHHHH
Confidence            477899999999999999999999999999999999987665443221           245778999999988887775


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                          .+++|++|||||.....+..+.+.+++++.+++|+.+++.+++++++.+.+++ .|+||++||..++.+.      
T Consensus        75 ----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  144 (245)
T PRK07060         75 ----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------  144 (245)
T ss_pred             ----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------
Confidence                46899999999987766777788999999999999999999999999998654 4899999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||++++++++.
T Consensus       145 ---------~~~~~y~~sK~a~~~~~~~  163 (245)
T PRK07060        145 ---------PDHLAYCASKAALDAITRV  163 (245)
T ss_pred             ---------CCCcHhHHHHHHHHHHHHH
Confidence                     7778899999999998864

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.9e-25  Score=181.81  Aligned_cols=157  Identities=22%  Similarity=0.299  Sum_probs=132.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH-Hhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA-WNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-~~~  144 (249)
                      .+++||||++|||+++|++|+++|++|++++|+.++.  .    .+.     .+.++.++.+|+++.+++++++++ +.+
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   70 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-----AGERLAEVELDLSDAAAAAAWLAGDLLA   70 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-----cCCeEEEEEeccCCHHHHHHHHHHHHHH
Confidence            3699999999999999999999999999999986531  1    111     123688899999999999997776 444


Q ss_pred             cC---CCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          145 RL---GPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       145 ~~---g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      .+   +++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.|+||++||..+..+.      
T Consensus        71 ~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------  144 (243)
T PRK07023         71 AFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY------  144 (243)
T ss_pred             HhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC------
Confidence            33   479999999997643 46677889999999999999999999999999998878999999999887776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+++|++++++++.
T Consensus       145 ---------~~~~~Y~~sK~a~~~~~~~  163 (243)
T PRK07023        145 ---------AGWSVYCATKAALDHHARA  163 (243)
T ss_pred             ---------CCchHHHHHHHHHHHHHHH
Confidence                     7888999999999999873

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=181.76  Aligned_cols=153  Identities=20%  Similarity=0.194  Sum_probs=115.5

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      |.....+++|+++||||++|||+++|++|+++|++|++++|+.....+   +...        .....+.+|++|.++++
T Consensus         6 ~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~~--------~~~~~~~~D~~~~~~~~   74 (245)
T PRK12367          6 PMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SNDE--------SPNEWIKWECGKEESLD   74 (245)
T ss_pred             hhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhcc--------CCCeEEEeeCCCHHHHH
Confidence            444567889999999999999999999999999999999998632111   1111        11256789999998775


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC---CCCeEEEEcCCccccC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG---SPSRIINVNSVMHYVG  213 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~---~~g~Iv~vsS~~~~~~  213 (249)
                      +       .++++|++|||||...   ..+.+.+++++++++|+.+++.++++++|.|+++   +++.+++.+|.++..+
T Consensus        75 ~-------~~~~iDilVnnAG~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~  144 (245)
T PRK12367         75 K-------QLASLDVLILNHGINP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP  144 (245)
T ss_pred             H-------hcCCCCEEEECCccCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC
Confidence            4       3468999999999743   3456789999999999999999999999999763   2334545556554322


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhh
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~  246 (249)
                                      +....|++||+|+..+.
T Consensus       145 ----------------~~~~~Y~aSKaal~~~~  161 (245)
T PRK12367        145 ----------------ALSPSYEISKRLIGQLV  161 (245)
T ss_pred             ----------------CCCchhHHHHHHHHHHH
Confidence                            45567999999986543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.8e-24  Score=178.94  Aligned_cols=151  Identities=23%  Similarity=0.271  Sum_probs=132.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+|+++||||++|||++++++|+++|++|++++|+.+..                 ....++.+|++|.++++++++++.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~   64 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----------------FPGELFACDLADIEQTAATLAQIN   64 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----------------cCceEEEeeCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999986430                 012467899999999999999988


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.+ ++|++|||+|.....++.+.+.+++++.+++|+.+++.+.++++|.|++.+.|+||++||... .+.         
T Consensus        65 ~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~---------  133 (234)
T PRK07577         65 EIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGA---------  133 (234)
T ss_pred             HhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCC---------
Confidence            876 689999999987777777889999999999999999999999999999887899999999853 344         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            +....|++||+++++|++.
T Consensus       134 ------~~~~~Y~~sK~a~~~~~~~  152 (234)
T PRK07577        134 ------LDRTSYSAAKSALVGCTRT  152 (234)
T ss_pred             ------CCchHHHHHHHHHHHHHHH
Confidence                  6778899999999999874

>PRK08264 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.5e-24  Score=177.78  Aligned_cols=155  Identities=30%  Similarity=0.402  Sum_probs=135.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+.+++++||||+++||+++|++|+++|+ +|++++|+.+++++     .        ..++.++.+|++|.++++++++
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-----~--------~~~~~~~~~D~~~~~~~~~~~~   69 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----L--------GPRVVPLQLDVTDPASVAAAAE   69 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-----c--------CCceEEEEecCCCHHHHHHHHH
Confidence            46789999999999999999999999999 99999999765543     0        1367889999999999988777


Q ss_pred             HHhccCCCccEEEecccc-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      .    ++++|++|||+|. ....++.+.+.+++++.+++|+.+++.++++++|.|++++.+++|++||..++.+.     
T Consensus        70 ~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----  140 (238)
T PRK08264         70 A----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-----  140 (238)
T ss_pred             h----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC-----
Confidence            5    3679999999998 55566778899999999999999999999999999998888999999999888776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|+++|+++++++++
T Consensus       141 ----------~~~~~y~~sK~a~~~~~~~  159 (238)
T PRK08264        141 ----------PNLGTYSASKAAAWSLTQA  159 (238)
T ss_pred             ----------CCchHhHHHHHHHHHHHHH
Confidence                      7888999999999998764

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.92  E-value=2.5e-24  Score=171.60  Aligned_cols=165  Identities=25%  Similarity=0.312  Sum_probs=131.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEE-EEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAES-GAHVV-MAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~-G~~Vi-l~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +.++||||.+|||..++++|.+. |..++ ..+|+++++   .+++......   ..++++++.|+++.++++++++++.
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~---d~rvHii~Ldvt~deS~~~~~~~V~   77 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKS---DSRVHIIQLDVTCDESIDNFVQEVE   77 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhcc---CCceEEEEEecccHHHHHHHHHHHH
Confidence            56999999999999999999976 55554 456777775   2333332211   1589999999999999999999999


Q ss_pred             cc--CCCccEEEeccccCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-----------CCeEEEEcCCc
Q 025705          144 GR--LGPLHVLINNAGIFSIG-EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-----------PSRIINVNSVM  209 (249)
Q Consensus       144 ~~--~g~id~linnag~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-----------~g~Iv~vsS~~  209 (249)
                      +-  ..++|+||||||+.... ...+.+.+.|.+.+++|..|++.++|+++|++++..           ++.|||+||.+
T Consensus        78 ~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~  157 (249)
T KOG1611|consen   78 KIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA  157 (249)
T ss_pred             hhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence            86  45699999999987533 334557788999999999999999999999998743           34899999987


Q ss_pred             cccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          210 HYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +-.+.            ....+..+|.+||+|+++|+|+
T Consensus       158 ~s~~~------------~~~~~~~AYrmSKaAlN~f~ks  184 (249)
T KOG1611|consen  158 GSIGG------------FRPGGLSAYRMSKAALNMFAKS  184 (249)
T ss_pred             cccCC------------CCCcchhhhHhhHHHHHHHHHH
Confidence            76543            1126788999999999999985

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-24  Score=175.77  Aligned_cols=137  Identities=15%  Similarity=0.213  Sum_probs=122.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||++|||+++|++|+++ ++|++++|+..                       .+.+|++|++++++++++    +
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------------~~~~D~~~~~~~~~~~~~----~   53 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------------DVQVDITDPASIRALFEK----V   53 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------------ceEecCCChHHHHHHHHh----c
Confidence            6899999999999999999999 99999998742                       257999999999998875    4


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+.  |+|+++||..+..+.            
T Consensus        54 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~~~------------  119 (199)
T PRK07578         54 GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDEPI------------  119 (199)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCCCC------------
Confidence            789999999998766777888999999999999999999999999999753  799999999888776            


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         ++...|++||+|+++|++.
T Consensus       120 ---~~~~~Y~~sK~a~~~~~~~  138 (199)
T PRK07578        120 ---PGGASAATVNGALEGFVKA  138 (199)
T ss_pred             ---CCchHHHHHHHHHHHHHHH
Confidence               7889999999999999874

>PRK08017 oxidoreductase; Provisional

Probab=99.92  E-value=4.4e-24  Score=178.95  Aligned_cols=155  Identities=28%  Similarity=0.371  Sum_probs=136.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||+||||.+++++|+++|++|++++|+.++++..    .+        ..+..+.+|++|.++++++++++.+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~--------~~~~~~~~D~~~~~~~~~~~~~i~~~   70 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS--------LGFTGILLDLDDPESVERAADEVIAL   70 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh--------CCCeEEEeecCCHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999998765433    11        13567899999999999999988764


Q ss_pred             C-CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          146 L-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~-g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      . +++|.+|||+|.....++.+.+.+++++.+++|+.|++.+++.+++.|.+.+.++||++||..+..+.          
T Consensus        71 ~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------  140 (256)
T PRK08017         71 TDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST----------  140 (256)
T ss_pred             cCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC----------
Confidence            3 67999999999876667778899999999999999999999999999998888899999999888776          


Q ss_pred             ccccCCCcccchhhHHHHHhhhh
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                           +....|++||++++++++
T Consensus       141 -----~~~~~Y~~sK~~~~~~~~  158 (256)
T PRK08017        141 -----PGRGAYAASKYALEAWSD  158 (256)
T ss_pred             -----CCccHHHHHHHHHHHHHH
Confidence                 778899999999999875

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.92  E-value=5.8e-24  Score=176.13  Aligned_cols=160  Identities=26%  Similarity=0.428  Sum_probs=138.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ++|||++++||.++|++|+++|++|++++|+. +.+++..+++.+.      +.++.++.+|++|+++++++++++.+.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY------GVKALGVVCDVSDREDVKAVVEEIEEEL   74 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc------CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999875 4444444444331      2368899999999999999999999888


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      +++|++|||+|......+.+.+.+.+++.+++|+.+++.+.+.+.+++.+.+.+++|++||..+..+.            
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------------  142 (239)
T TIGR01830        75 GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------------  142 (239)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------------
Confidence            99999999999876556677888999999999999999999999999987777899999999888887            


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         ++...|+++|++++++++.
T Consensus       143 ---~~~~~y~~~k~a~~~~~~~  161 (239)
T TIGR01830       143 ---AGQANYAASKAGVIGFTKS  161 (239)
T ss_pred             ---CCCchhHHHHHHHHHHHHH
Confidence               7788999999999988764

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.4e-24  Score=177.00  Aligned_cols=150  Identities=18%  Similarity=0.171  Sum_probs=129.7

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCCC
Q 025705           69 IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGP  148 (249)
Q Consensus        69 lItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  148 (249)
                      +||||++|||++++++|+++|++|++++|+++++++..+++.+       +.++.++.+|++|.+++++++++    .++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~----~~~   69 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-------GAPVRTAALDITDEAAVDAFFAE----AGP   69 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-------CCceEEEEccCCCHHHHHHHHHh----cCC
Confidence            6999999999999999999999999999998777666555431       14678899999999999998876    378


Q ss_pred             ccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccccc
Q 025705          149 LHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRK  228 (249)
Q Consensus       149 id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~  228 (249)
                      +|++|||+|.....++.+.+.+++++++++|+.+++.+++  .+.|.  +.|+||++||..++.+.              
T Consensus        70 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~--------------  131 (230)
T PRK07041         70 FDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPS--------------  131 (230)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCC--------------
Confidence            9999999998777777888999999999999999999999  44553  45899999999988776              


Q ss_pred             CCCcccchhhHHHHHhhhhc
Q 025705          229 YTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       229 ~~~~~~Y~asKaal~~l~~~  248 (249)
                       ++...|++||+++++|+|.
T Consensus       132 -~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041        132 -ASGVLQGAINAALEALARG  150 (230)
T ss_pred             -CcchHHHHHHHHHHHHHHH
Confidence             7888999999999999874

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.92  E-value=8.4e-24  Score=174.36  Aligned_cols=157  Identities=20%  Similarity=0.246  Sum_probs=130.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||.+++++|+++|++|++++|++++.++.. ++          .++.+..+|++|.++++++++++.+ 
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~----------~~~~~~~~D~~d~~~~~~~~~~~~~-   69 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL----------PGVHIEKLDMNDPASLDQLLQRLQG-   69 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc----------cccceEEcCCCCHHHHHHHHHHhhc-
Confidence            68999999999999999999999999999999987654331 11          2456778999999999999998864 


Q ss_pred             CCCccEEEeccccCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          146 LGPLHVLINNAGIFSI--GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       146 ~g~id~linnag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                       +++|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+. .|.|+++||..+..+..        
T Consensus        70 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~--------  139 (225)
T PRK08177         70 -QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELP--------  139 (225)
T ss_pred             -CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccC--------
Confidence             479999999998643  356778899999999999999999999999998754 47999999987665431        


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          +..+...|+++|+++++|++.
T Consensus       140 ----~~~~~~~Y~~sK~a~~~~~~~  160 (225)
T PRK08177        140 ----DGGEMPLYKASKAALNSMTRS  160 (225)
T ss_pred             ----CCCCccchHHHHHHHHHHHHH
Confidence                114566799999999999874

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.92  E-value=6.5e-24  Score=175.93  Aligned_cols=153  Identities=22%  Similarity=0.321  Sum_probs=122.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++||||++|||+++|++|+++|  +.|++.+|+....      .        ...++.++++|+++.++++++.+   
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--------~~~~~~~~~~Dls~~~~~~~~~~---   63 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--------QHDNVQWHALDVTDEAEIKQLSE---   63 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--------ccCceEEEEecCCCHHHHHHHHH---
Confidence            469999999999999999999985  5666666654211      0        01367889999999999887544   


Q ss_pred             ccCCCccEEEeccccCCC------CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          144 GRLGPLHVLINNAGIFSI------GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       144 ~~~g~id~linnag~~~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                       .++++|++|||||....      .++.+.+.+.+++.+++|+.+++.+++.++|.|.+++.++|+++||..+....   
T Consensus        64 -~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~---  139 (235)
T PRK09009         64 -QFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD---  139 (235)
T ss_pred             -hcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc---
Confidence             45789999999998642      24567788999999999999999999999999988777899999987654321   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ...++...|+++|+|+++|++.
T Consensus       140 ---------~~~~~~~~Y~asK~a~~~~~~~  161 (235)
T PRK09009        140 ---------NRLGGWYSYRASKAALNMFLKT  161 (235)
T ss_pred             ---------CCCCCcchhhhhHHHHHHHHHH
Confidence                     1126678999999999999874

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.5e-23  Score=175.05  Aligned_cols=163  Identities=25%  Similarity=0.217  Sum_probs=128.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH-HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+ ..+...+++...      +.++.++.+|++|.++++++++
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~   76 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA------GGRASAVGADLTDEESVAALMD   76 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHHHH
Confidence            467899999999999999999999999999999999753 444444444431      1367889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....   +   ..++..+++|+.+++.+++++.|+|.+  .|+||++||..+.....     
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~-----  143 (248)
T PRK07806         77 TAREEFGGLDALVLNASGGMES---G---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPT-----  143 (248)
T ss_pred             HHHHhCCCCcEEEECCCCCCCC---C---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCcc-----
Confidence            9988889999999999864221   1   124567899999999999999999864  37999999965432110     


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ....+.+..|++||+++++++++
T Consensus       144 -----~~~~~~~~~Y~~sK~a~e~~~~~  166 (248)
T PRK07806        144 -----VKTMPEYEPVARSKRAGEDALRA  166 (248)
T ss_pred             -----ccCCccccHHHHHHHHHHHHHHH
Confidence                 01124567899999999998874

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=4.9e-23  Score=170.78  Aligned_cols=162  Identities=19%  Similarity=0.153  Sum_probs=134.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++||||++|||.++++.|+++|++|++++|++++++...+++...       .++.++.+|+++.+++++++++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~   74 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-------GNIHYVVGDVSSTESARNVIEK   74 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------CCeEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999999988776655554431       2578889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +...++++|.+|+|+|.....++.  +.+.+++++++|+.+++.+.+.++|.|.+  .|++|++||..+..+.       
T Consensus        75 ~~~~~~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~-------  143 (238)
T PRK05786         75 AAKVLNAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKA-------  143 (238)
T ss_pred             HHHHhCCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccC-------
Confidence            988888999999999975433333  33889999999999999999999999865  3799999998764322       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             .+....|++||++++.+++.
T Consensus       144 -------~~~~~~Y~~sK~~~~~~~~~  163 (238)
T PRK05786        144 -------SPDQLSYAVAKAGLAKAVEI  163 (238)
T ss_pred             -------CCCchHHHHHHHHHHHHHHH
Confidence                   15667899999999888753

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.91  E-value=4.2e-23  Score=183.01  Aligned_cols=148  Identities=22%  Similarity=0.250  Sum_probs=116.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++++..   .+.      ...+..+.+|++|.+++.+.    
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~------~~~v~~v~~Dvsd~~~v~~~----  242 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE------DLPVKTLHWQVGQEAALAEL----  242 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc------CCCeEEEEeeCCCHHHHHHH----
Confidence            46899999999999999999999999999999999876654322   110      12466788999999887553    


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC----CeEEEEcCCccccCCCCcc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP----SRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~----g~Iv~vsS~~~~~~~~~~~  218 (249)
                         ++++|++|||||...   ..+.+.|++++++++|+.|++.++++++|.|++++.    +.+|++|+ ++ ...    
T Consensus       243 ---l~~IDiLInnAGi~~---~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~----  310 (406)
T PRK07424        243 ---LEKVDILIINHGINV---HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNP----  310 (406)
T ss_pred             ---hCCCCEEEECCCcCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccC----
Confidence               357999999999753   236788999999999999999999999999987642    34666654 32 222    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhh
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~  246 (249)
                                 +..+.|++||+|+.+|+
T Consensus       311 -----------~~~~~Y~ASKaAl~~l~  327 (406)
T PRK07424        311 -----------AFSPLYELSKRALGDLV  327 (406)
T ss_pred             -----------CCchHHHHHHHHHHHHH
Confidence                       44567999999999975

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.1e-23  Score=168.49  Aligned_cols=156  Identities=26%  Similarity=0.357  Sum_probs=127.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||+++||.+++++|+++|++|++++|+.+.+++.    ..        ..+.++.+|+++.++++++++++.. 
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~--------~~~~~~~~D~~~~~~v~~~~~~~~~-   68 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QA--------LGAEALALDVADPASVAGLAWKLDG-   68 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hh--------ccceEEEecCCCHHHHHHHHHHhcC-
Confidence            5799999999999999999999999999999997765433    22        1245789999999999998887643 


Q ss_pred             CCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          146 LGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       146 ~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                       +++|++|||+|...  ..+..+.+.+++++.+++|+.+++.++++++|+|.+. .|+++++||..+..+...       
T Consensus        69 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-------  139 (222)
T PRK06953         69 -EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDAT-------  139 (222)
T ss_pred             -CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCccccccccc-------
Confidence             47999999999863  2345677899999999999999999999999988664 589999999887766410       


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ......|+++|++++++++.
T Consensus       140 -----~~~~~~Y~~sK~a~~~~~~~  159 (222)
T PRK06953        140 -----GTTGWLYRASKAALNDALRA  159 (222)
T ss_pred             -----CCCccccHHhHHHHHHHHHH
Confidence                 02223699999999999874

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.1e-22  Score=160.08  Aligned_cols=158  Identities=23%  Similarity=0.263  Sum_probs=132.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHH---HHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELI---QKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      |+++||||++|||++++++|+++|+ .|++++|+++..+...   +++.+      ...++.++.+|+++++++++++++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~   74 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA------LGAEVTVVACDVADRAALAAALAA   74 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh------cCCeEEEEECCCCCHHHHHHHHHH
Confidence            5789999999999999999999997 6888888765544332   23322      124788899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +...++++|.+|||+|.....++.+.+.+++++++++|+.+++.+.+.+.+    .+.++++++||..+..+.       
T Consensus        75 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~-------  143 (180)
T smart00822       75 IPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGN-------  143 (180)
T ss_pred             HHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCC-------
Confidence            988889999999999987666677889999999999999999999999843    355899999999888776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+++|+++..++++
T Consensus       144 --------~~~~~y~~sk~~~~~~~~~  162 (180)
T smart00822      144 --------PGQANYAAANAFLDALAAH  162 (180)
T ss_pred             --------CCchhhHHHHHHHHHHHHH
Confidence                    7788999999999999864

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.7e-22  Score=163.05  Aligned_cols=153  Identities=28%  Similarity=0.418  Sum_probs=130.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .++++||||+++||.+++++|+++ ++|++++|+.++.++..++.          ..+.++.+|++|.++++++++++  
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~--   69 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----------PGATPFPVDLTDPEAIAAAVEQL--   69 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----------ccceEEecCCCCHHHHHHHHHhc--
Confidence            478999999999999999999999 99999999976654433221          14678899999999998887753  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                        +++|++||++|.....+..+.+.+++++.+++|+.+++.+++.+++.|.++ .+++|++||..+..+.          
T Consensus        70 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~----------  136 (227)
T PRK08219         70 --GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRAN----------  136 (227)
T ss_pred             --CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcC----------
Confidence              479999999998766667778899999999999999999999999998876 4799999999887766          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++...|+++|++++++++.
T Consensus       137 -----~~~~~y~~~K~a~~~~~~~  155 (227)
T PRK08219        137 -----PGWGSYAASKFALRALADA  155 (227)
T ss_pred             -----CCCchHHHHHHHHHHHHHH
Confidence                 6788999999999998763

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.89  E-value=3.6e-22  Score=206.52  Aligned_cols=163  Identities=19%  Similarity=0.133  Sum_probs=134.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChH--------------HHHHHH----------------------
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLK--------------AANELI----------------------  106 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~--------------~~~~~~----------------------  106 (249)
                      +|+++|||||++|||+++|++|+++ |++|++++|+..              .++...                      
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699999999820              010000                      


Q ss_pred             ----HHH---HHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhh
Q 025705          107 ----QKW---QEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN  179 (249)
Q Consensus       107 ----~~~---~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN  179 (249)
                          .++   .+.+..  .+.++.++.||++|.++++++++++.+. ++||+||||||+.....+.+.+.++|++++++|
T Consensus      2076 ~~~~~ei~~~la~l~~--~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKA--AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                000   111111  2357889999999999999999999876 689999999999887888999999999999999


Q ss_pred             hhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          180 HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       180 ~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +.|.+.+.+++.+.+.    ++||++||+++.++.               ++++.|+++|+++++|++.
T Consensus      2153 v~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~---------------~gqs~YaaAkaaL~~la~~ 2202 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI----KLLALFSSAAGFYGN---------------TGQSDYAMSNDILNKAALQ 2202 (2582)
T ss_pred             HHHHHHHHHHHHHhCC----CeEEEEechhhcCCC---------------CCcHHHHHHHHHHHHHHHH
Confidence            9999999999876543    479999999999988               8999999999999998864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=1.2e-21  Score=156.57  Aligned_cols=157  Identities=21%  Similarity=0.275  Sum_probs=125.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChH---HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLK---AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++||||.+|||..+++.|+++|. +|++++|+..   ..++..+++++.      +.++.++.||++|+++++++++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~------g~~v~~~~~Dv~d~~~v~~~~~~~   75 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA------GARVEYVQCDVTDPEAVAAALAQL   75 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT------T-EEEEEE--TTSHHHHHHHHHTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC------CCceeeeccCccCHHHHHHHHHHH
Confidence            789999999999999999999987 8999999932   344555565552      358999999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.+++||.+||+||.....++.+.+.+++++++...+.+...+.+.+.+    ..-..+|.+||+++..|.        
T Consensus        76 ~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~--------  143 (181)
T PF08659_consen   76 RQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGG--------  143 (181)
T ss_dssp             HTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT---------
T ss_pred             HhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccC--------
Confidence            99999999999999998888899999999999999999999999998765    334589999999999998        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++++.|+++.+.++.|+++
T Consensus       144 -------~gq~~YaaAN~~lda~a~~  162 (181)
T PF08659_consen  144 -------PGQSAYAAANAFLDALARQ  162 (181)
T ss_dssp             -------TTBHHHHHHHHHHHHHHHH
T ss_pred             -------cchHhHHHHHHHHHHHHHH
Confidence                   9999999999999999875

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.87  E-value=2.7e-21  Score=156.35  Aligned_cols=174  Identities=23%  Similarity=0.275  Sum_probs=148.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-----EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA-----HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~-----~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .|+++|||++||||.++|++|++...     .+++.+|+.++++++...+++.++...  .++.++.+|+++..++.++.
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~--i~~~yvlvD~sNm~Sv~~A~   80 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKST--IEVTYVLVDVSNMQSVFRAS   80 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCce--eEEEEEEEehhhHHHHHHHH
Confidence            48999999999999999999998643     478889999999999999999887532  58999999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCC---------------------------CCCHHHHHHHHHhhhhHHHHHHHHhch
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQ---------------------------KFSKDGYEEHMQVNHLAPALLSILLFP  192 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~---------------------------~~~~~~~~~~~~vN~~~~~~l~~~~l~  192 (249)
                      .+++++|.++|.++.|||+.....+.                           ..+.|++..+++.|++|+|.+.+.+.|
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            99999999999999999985422111                           246688999999999999999999999


Q ss_pred             hhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhh
Q 025705          193 SLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       193 ~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~  246 (249)
                      ++..++.-.+|.+||..+.-.....+|++-.      .+-.+|+.||.+++-+.
T Consensus       161 ll~~~~~~~lvwtSS~~a~kk~lsleD~q~~------kg~~pY~sSKrl~DlLh  208 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMARKKNLSLEDFQHS------KGKEPYSSSKRLTDLLH  208 (341)
T ss_pred             HhhcCCCCeEEEEeecccccccCCHHHHhhh------cCCCCcchhHHHHHHHH
Confidence            9988776799999999888777666666655      56677999999987653

>PRK06720 hypothetical protein; Provisional

Probab=99.86  E-value=3.4e-20  Score=146.33  Aligned_cols=142  Identities=16%  Similarity=0.151  Sum_probs=115.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++|+++||||++|||.++|+.|++.|++|++++|+.+.+++..+++.+.      +.++.++.+|+++.+++++++++
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~v~~~v~~   86 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL------GGEALFVSYDMEKQGDWQRVISI   86 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999999988777766666531      13567889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-------CCeEEEEcCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIG-EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-------PSRIINVNSVMHYV  212 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-------~g~Iv~vsS~~~~~  212 (249)
                      +.+.+|++|++|||||+.... ++.+.++++ ++  .+|+.+++..++.+.++|++++       .|++..|||.++.+
T Consensus        87 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         87 TLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            999999999999999987643 344445444 33  7778888999999999988653       57888888876443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.85  E-value=1.4e-21  Score=155.90  Aligned_cols=163  Identities=17%  Similarity=0.166  Sum_probs=127.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..++++|+||+|+|||..++..+...+-..+..+++...++  .+.++..+     +........|++....+..+++..
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~-----gd~~v~~~g~~~e~~~l~al~e~~   76 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY-----GDDFVHVVGDITEEQLLGALREAP   76 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe-----cCCcceechHHHHHHHHHHHHhhh
Confidence            34688999999999999988888877654443333322221  11111111     123444557888888889999999


Q ss_pred             hccCCCccEEEeccccCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          143 NGRLGPLHVLINNAGIFSIG---EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+..|++|||||...+-   .....+.++|++.+++|+++++.+.+.++|.++++. .|.+||+||.++..+.    
T Consensus        77 r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~----  152 (253)
T KOG1204|consen   77 RKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPF----  152 (253)
T ss_pred             hhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccc----
Confidence            99999999999999986532   223668899999999999999999999999999873 5899999999999988    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhh
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                                 ++++.||++|||.++|.+
T Consensus       153 -----------~~wa~yc~~KaAr~m~f~  170 (253)
T KOG1204|consen  153 -----------SSWAAYCSSKAARNMYFM  170 (253)
T ss_pred             -----------cHHHHhhhhHHHHHHHHH
Confidence                       899999999999999986

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.84  E-value=2.4e-19  Score=143.38  Aligned_cols=163  Identities=15%  Similarity=0.154  Sum_probs=145.2

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++||+.||+|-.  ++|+..||+.|.++|+.++.++.++ ++++..+++.+...      ...+++||+++.+++++++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~------s~~v~~cDV~~d~~i~~~f   75 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG------SDLVLPCDVTNDESIDALF   75 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc------CCeEEecCCCCHHHHHHHH
Confidence            5789999999944  7999999999999999999999886 77777777777543      2467899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++++++|.+|++||+-|+..    .+.+.+.+.|.|...+++..++-..+++++.|.|.+  +|+||.++-..+.... 
T Consensus        76 ~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~v-  152 (259)
T COG0623          76 ATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVV-  152 (259)
T ss_pred             HHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeec-
Confidence            999999999999999999865    456778999999999999999999999999999977  4799999998887777 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    |.+...+.+||||+.-+|+
T Consensus       153 --------------PnYNvMGvAKAaLEasvRy  171 (259)
T COG0623         153 --------------PNYNVMGVAKAALEASVRY  171 (259)
T ss_pred             --------------CCCchhHHHHHHHHHHHHH
Confidence                          8999999999999998886

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.80  E-value=3.2e-18  Score=148.81  Aligned_cols=144  Identities=16%  Similarity=0.203  Sum_probs=109.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++||+++||||+|+||.+++++|+++|  ++|++++|+.....+..+++    ..    .++.++.+|++|.+.+.++++
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~----~~~~~v~~Dl~d~~~l~~~~~   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PA----PCLRFFIGDVRDKERLTRALR   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CC----CcEEEEEccCCCHHHHHHHHh
Confidence            467999999999999999999999986  78999998865543322221    11    357889999999998887664


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                             ++|++||+||.... +..+.+   .++.+++|+.++.++++++.+    .+.++||++||....         
T Consensus        74 -------~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~---------  129 (324)
T TIGR03589        74 -------GVDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAA---------  129 (324)
T ss_pred             -------cCCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCC---------
Confidence                   48999999997532 222222   346899999999999999865    345699999996432         


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhh
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                               .+...|++||++.+.+++
T Consensus       130 ---------~p~~~Y~~sK~~~E~l~~  147 (324)
T TIGR03589       130 ---------NPINLYGATKLASDKLFV  147 (324)
T ss_pred             ---------CCCCHHHHHHHHHHHHHH
Confidence                     234679999999998875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.79  E-value=4.1e-18  Score=147.94  Aligned_cols=166  Identities=16%  Similarity=0.033  Sum_probs=118.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+|+++||||+|+||++++++|+++|++|++++|+.+..++.. .+... .  +...++.++.+|++|.++++++++   
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~--~~~~~~~~~~~D~~d~~~~~~~~~---   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTD-HLLAL-D--GAKERLKLFKADLLDEGSFELAID---   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHH-HHHhc-c--CCCCceEEEeCCCCCchHHHHHHc---
Confidence            4789999999999999999999999999999998876554432 21111 0  111367889999999998887765   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc-ccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT-EDMNV  222 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~-~~~~~  222 (249)
                          ++|++|||||...    ...+.+.+.+.+++|+.+++++++++.+.+   +.++||++||..++.+.... .+...
T Consensus        77 ----~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~  145 (325)
T PLN02989         77 ----GCETVFHTASPVA----ITVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDV  145 (325)
T ss_pred             ----CCCEEEEeCCCCC----CCCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCc
Confidence                4899999999642    123445678999999999999999987754   24699999998877653210 00001


Q ss_pred             ccccccC------CCcccchhhHHHHHhhhh
Q 025705          223 VSGRRKY------TSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       223 ~~~~~~~------~~~~~Y~asKaal~~l~~  247 (249)
                      .++....      +....|+.||.+.+.+++
T Consensus       146 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~  176 (325)
T PLN02989        146 VDETFFTNPSFAEERKQWYVLSKTLAEDAAW  176 (325)
T ss_pred             cCcCCCCchhHhcccccchHHHHHHHHHHHH
Confidence            1111111      123579999999998765

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.79  E-value=5.5e-18  Score=148.70  Aligned_cols=164  Identities=18%  Similarity=0.051  Sum_probs=119.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++|++++||||+|+||.+++++|+++|++|++++|+..........+..       ..++.++.+|++|.+++.+++++.
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-------AKKIEDHFGDIRDAAKLRKAIAEF   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-------cCCceEEEccCCCHHHHHHHHhhc
Confidence            4578999999999999999999999999999999987654333222211       125677899999999998888864


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                           ++|++||+||...    ...+.++....+++|+.+++.+++++.+.   ...+++|++||...+... .+.  .-
T Consensus        75 -----~~d~vih~A~~~~----~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~-~~~--~~  139 (349)
T TIGR02622        75 -----KPEIVFHLAAQPL----VRKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRND-EWV--WG  139 (349)
T ss_pred             -----CCCEEEECCcccc----cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCC-CCC--CC
Confidence                 5899999999532    23345667788999999999999987431   124699999997655321 110  00


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .++..+..+...|++||++.+.++++
T Consensus       140 ~~e~~~~~p~~~Y~~sK~~~e~~~~~  165 (349)
T TIGR02622       140 YRETDPLGGHDPYSSSKACAELVIAS  165 (349)
T ss_pred             CccCCCCCCCCcchhHHHHHHHHHHH
Confidence            12223345677899999999988864

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.78  E-value=6.8e-18  Score=147.53  Aligned_cols=171  Identities=14%  Similarity=0.016  Sum_probs=121.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH-HHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN-ELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +.+++++|||||+|+||.+++++|+++|++|++++|+..... ...+.+.....  ....++.++.+|++|.+++.++++
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~   80 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPH--PNKARMKLHYGDLSDASSLRRWLD   80 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccc--cccCceEEEEecCCCHHHHHHHHH
Confidence            567899999999999999999999999999999998754211 11122211000  011357899999999999998888


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ..     .+|++||+||.....    ...+..+..+++|+.++..+++++.+.+.+++. -++|++||...+... .. +
T Consensus        81 ~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~-~~-~  149 (340)
T PLN02653         81 DI-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST-PP-P  149 (340)
T ss_pred             Hc-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC-CC-C
Confidence            64     589999999975321    123445677899999999999999888765311 268888886544322 11 1


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         .++..+..+...|+.||.+.+.+++.
T Consensus       150 ---~~E~~~~~p~~~Y~~sK~~~e~~~~~  175 (340)
T PLN02653        150 ---QSETTPFHPRSPYAVAKVAAHWYTVN  175 (340)
T ss_pred             ---CCCCCCCCCCChhHHHHHHHHHHHHH
Confidence               12333445677899999999998753

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.76  E-value=4e-18  Score=142.11  Aligned_cols=138  Identities=24%  Similarity=0.150  Sum_probs=104.7

Q ss_pred             HHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCCCccEEEeccccCC
Q 025705           81 IARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus        81 ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~  160 (249)
                      +|++|+++|++|++++|+.++.+     .            ..++.+|++|.++++++++++.   +++|+||||||...
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~------------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L------------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h------------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC
Confidence            47899999999999999876531     0            1346899999999999998874   68999999999752


Q ss_pred             CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc-------cccc-----cccc
Q 025705          161 IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM-------NVVS-----GRRK  228 (249)
Q Consensus       161 ~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~-------~~~~-----~~~~  228 (249)
                              .+.+++++++|+.+++.+++.++|+|.+  .|+||++||.+++......+..       +...     ...+
T Consensus        61 --------~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (241)
T PRK12428         61 --------TAPVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHP  130 (241)
T ss_pred             --------CCCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccC
Confidence                    1357899999999999999999999965  3899999999887422110000       0000     0124


Q ss_pred             CCCcccchhhHHHHHhhhhc
Q 025705          229 YTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       229 ~~~~~~Y~asKaal~~l~~~  248 (249)
                      .++...|++||+|+++|+|.
T Consensus       131 ~~~~~~Y~~sK~a~~~~~~~  150 (241)
T PRK12428        131 VALATGYQLSKEALILWTMR  150 (241)
T ss_pred             CCcccHHHHHHHHHHHHHHH
Confidence            46778999999999999863

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.74  E-value=8.2e-17  Score=140.92  Aligned_cols=168  Identities=15%  Similarity=0.055  Sum_probs=115.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHH-HHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAA-NELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.. .....++.+.... ....++.++.+|++|.+.+.++++..  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~--   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHN-VNKARMKLHYGDLTDSSNLRRIIDEI--   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcccc-ccccceeEEEeccCCHHHHHHHHHhC--
Confidence            5799999999999999999999999999999986421 1111111111000 00135788999999999998888864  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         ++|++||+|+......    ..+.-...+++|+.++..+++++.+.-.++ ..++|++||...+... ....   .+
T Consensus        78 ---~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~-~~~~v~~SS~~vyg~~-~~~~---~~  145 (343)
T TIGR01472        78 ---KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK-SVKFYQASTSELYGKV-QEIP---QN  145 (343)
T ss_pred             ---CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc-CeeEEEeccHHhhCCC-CCCC---CC
Confidence               5899999999754221    222335677899999999999987642211 1379999997654322 1111   22


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+..+...|++||.+.+.+++.
T Consensus       146 E~~~~~p~~~Y~~sK~~~e~~~~~  169 (343)
T TIGR01472       146 ETTPFYPRSPYAAAKLYAHWITVN  169 (343)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHH
Confidence            334445677899999999998853

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=99.73  E-value=2.1e-16  Score=138.55  Aligned_cols=167  Identities=18%  Similarity=0.153  Sum_probs=118.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+.+++++||||+|+||.+++++|+++|++|++++|..........++......  ...++.++.+|++|.+.+.+++++
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~~   79 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGD--LGDNLVFHKVDLRDKEALEKVFAS   79 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcc--cCccceEEecCcCCHHHHHHHHHh
Confidence            456799999999999999999999999999999987643332222233221111  113578889999999999888775


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .     ++|++||+||.....    .+.+...+.+++|+.++..+.+++    .+.+.+++|++||...+ +......  
T Consensus        80 ~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vy-g~~~~~~--  143 (352)
T PLN02240         80 T-----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVY-GQPEEVP--  143 (352)
T ss_pred             C-----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHh-CCCCCCC--
Confidence            2     699999999975321    133466788999999999998864    34444689999996443 3221111  


Q ss_pred             cccccccCCCcccchhhHHHHHhhhh
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                       .++..+..+...|+.||.+.+.+++
T Consensus       144 -~~E~~~~~~~~~Y~~sK~~~e~~~~  168 (352)
T PLN02240        144 -CTEEFPLSATNPYGRTKLFIEEICR  168 (352)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHHHHH
Confidence             2333444566789999999998875

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.72  E-value=4.4e-16  Score=135.53  Aligned_cols=162  Identities=12%  Similarity=0.052  Sum_probs=115.8

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCEEEEEEcChHHHH------------HHHHHHHHhhcCCCCCCceEEEEcc
Q 025705           63 VNDLTCIVTGSTSGIGRE--IARQLAESGAHVVMAVRNLKAAN------------ELIQKWQEEWSGKGLPLNIEAMELD  128 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~--ia~~l~~~G~~Vil~~r~~~~~~------------~~~~~~~~~~~~~~~~~~v~~~~~D  128 (249)
                      --+|++||||+++|||.+  +|+.| +.|++|+++++..++.+            ...+.+.+    .  +.++..+.||
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~----~--G~~a~~i~~D  111 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA----A--GLYAKSINGD  111 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh----c--CCceEEEEcC
Confidence            346999999999999999  89999 99999998886432222            12222222    1  2356788999


Q ss_pred             CCCHHHHHHHHHHHhccCCCccEEEeccccCCCCC-----------------C----C-------------CCCHHHHHH
Q 025705          129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGE-----------------P----Q-------------KFSKDGYEE  174 (249)
Q Consensus       129 ~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~-----------------~----~-------------~~~~~~~~~  174 (249)
                      +++.++++++++++.+.+|+||+||||+|......                 +    .             ..+.++++.
T Consensus       112 Vss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~  191 (398)
T PRK13656        112 AFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIAD  191 (398)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHH
Confidence            99999999999999999999999999999873211                 1    1             234556666


Q ss_pred             HHHhhhh-HHHHH--HHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCc--ccchhhHHHHHhhhhc
Q 025705          175 HMQVNHL-APALL--SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL--MGYSGSKLAQVKLETK  248 (249)
Q Consensus       175 ~~~vN~~-~~~~l--~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~asKaal~~l~~~  248 (249)
                      ++++.-. .-...  ++...+.|.+  ++++|-.|+.......               |.+  ..-|.+|++|+.-+|+
T Consensus       192 Tv~vMggedw~~Wi~al~~a~lla~--g~~~va~TY~G~~~t~---------------p~Y~~g~mG~AKa~LE~~~r~  253 (398)
T PRK13656        192 TVKVMGGEDWELWIDALDEAGVLAE--GAKTVAYSYIGPELTH---------------PIYWDGTIGKAKKDLDRTALA  253 (398)
T ss_pred             HHHhhccchHHHHHHHHHhcccccC--CcEEEEEecCCcceee---------------cccCCchHHHHHHHHHHHHHH
Confidence            5554333 11222  3444565644  4899999998776665               565  4789999999998875

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.72  E-value=5.2e-16  Score=136.37  Aligned_cols=170  Identities=17%  Similarity=0.122  Sum_probs=116.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ...++++|||||+|+||.+++++|+++|++|++++|+.+..+....++..       ..++.++.+|+++.+.+.++++ 
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~-   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-------GDRLRLFRADLQEEGSFDEAVK-   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-------CCeEEEEECCCCCHHHHHHHHc-
Confidence            34678999999999999999999999999999999987655444333221       1368889999999988877654 


Q ss_pred             HhccCCCccEEEeccccCCCCC-CCCCCHHHH--HHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc-
Q 025705          142 WNGRLGPLHVLINNAGIFSIGE-PQKFSKDGY--EEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT-  217 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~-~~~~~~~~~--~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~-  217 (249)
                            ++|++||+||...... ....+++.+  ..++++|+.++..+.+++.+..   +.++||++||.+.+...... 
T Consensus        79 ------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~  149 (353)
T PLN02896         79 ------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNG  149 (353)
T ss_pred             ------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCC
Confidence                  4899999999754321 112233333  4567888899999999876542   23589999998766532110 


Q ss_pred             ---ccccccccc------ccCCCcccchhhHHHHHhhhhc
Q 025705          218 ---EDMNVVSGR------RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ---~~~~~~~~~------~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         ...++....      ...++...|+.||.+.+.++++
T Consensus       150 ~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~  189 (353)
T PLN02896        150 RWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFK  189 (353)
T ss_pred             CCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHH
Confidence               111111000      0123445799999999987653

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.71  E-value=4.3e-16  Score=142.11  Aligned_cols=138  Identities=23%  Similarity=0.204  Sum_probs=106.0

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhc-CCC--CCCceEEEEccCCCHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWS-GKG--LPLNIEAMELDLLSLD  133 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~-~~~--~~~~v~~~~~D~~~~~  133 (249)
                      +......+||+++||||+||||++++++|+++|++|++++|+.++++...+++.+... ..+  ...++.++.+|++|.+
T Consensus        72 ~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e  151 (576)
T PLN03209         72 PKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD  151 (576)
T ss_pred             ccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence            4455567899999999999999999999999999999999999888777666543210 001  1135889999999998


Q ss_pred             HHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          134 SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       134 ~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      ++.+.       ++++|+||||+|....      ...++...+++|+.++.++++++..    .+.++||++||..+.
T Consensus       152 sI~~a-------LggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~  212 (576)
T PLN03209        152 QIGPA-------LGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTN  212 (576)
T ss_pred             HHHHH-------hcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhc
Confidence            87553       3579999999997531      1124677889999999999988754    355799999998763

>PLN02214 cinnamoyl-CoA reductase

Probab=99.71  E-value=5.2e-16  Score=135.89  Aligned_cols=161  Identities=15%  Similarity=0.068  Sum_probs=114.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH-HHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL-IQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.+..... ..++..      ...++.++.+|++|.+++.++++
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG------GKERLILCKADLQDYEALKAAID   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC------CCCcEEEEecCcCChHHHHHHHh
Confidence            35678999999999999999999999999999999986543221 111111      11257888999999998877765


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                             ++|++||+||...         +..++.+++|+.++..+.+++...    +.++||++||..+.++.....+.
T Consensus        81 -------~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~avyg~~~~~~~  140 (342)
T PLN02214         81 -------GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAVYMDPNRDPE  140 (342)
T ss_pred             -------cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceeeeccCCCCCC
Confidence                   4899999998531         235678999999999999987543    34589999998766543211110


Q ss_pred             ccccccc------cCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRR------KYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~------~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ...++..      ...+...|+.||.+.+.+++.
T Consensus       141 ~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~  174 (342)
T PLN02214        141 AVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWE  174 (342)
T ss_pred             cccCcccCCChhhccccccHHHHHHHHHHHHHHH
Confidence            1111111      112456799999999988753

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.71  E-value=4.2e-16  Score=140.79  Aligned_cols=177  Identities=12%  Similarity=0.059  Sum_probs=119.3

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH---H----H---------HHHHHHHHHhhcCCCCCCc
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK---A----A---------NELIQKWQEEWSGKGLPLN  121 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~---~----~---------~~~~~~~~~~~~~~~~~~~  121 (249)
                      ......++++++||||+|+||++++++|+++|++|+++++...   .    .         .+..+.+.+. .    ..+
T Consensus        40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~----~~~  114 (442)
T PLN02572         40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-S----GKE  114 (442)
T ss_pred             CCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-h----CCc
Confidence            3445678899999999999999999999999999999874211   0    0         0111111111 0    125


Q ss_pred             eEEEEccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCe
Q 025705          122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSR  201 (249)
Q Consensus       122 v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~  201 (249)
                      +.++.+|++|.+.+.+++++.     ++|++||+|+... .+....++++++..+++|+.|++++++++...-.   ..+
T Consensus       115 v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---~~~  185 (442)
T PLN02572        115 IELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP---DCH  185 (442)
T ss_pred             ceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---Ccc
Confidence            788999999999998888863     6999999997642 2333445566778899999999999998755321   248


Q ss_pred             EEEEcCCccccCCC-C--cccccc------ccccccCCCcccchhhHHHHHhhhhc
Q 025705          202 IINVNSVMHYVGFV-D--TEDMNV------VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       202 Iv~vsS~~~~~~~~-~--~~~~~~------~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +|++||...+.... +  .+.+..      .....+..+...|+.||.+.+.+++.
T Consensus       186 ~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~  241 (442)
T PLN02572        186 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAF  241 (442)
T ss_pred             EEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHH
Confidence            99999986553221 0  001100      00001334556899999998887753

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.71  E-value=7.3e-16  Score=134.62  Aligned_cols=167  Identities=17%  Similarity=0.074  Sum_probs=113.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.+...... .+.. ....   .++.++.+|++|.+.+.++++ 
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~-~~~~---~~~~~~~~Dl~d~~~~~~~~~-   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRA-LQEL---GDLKIFGADLTDEESFEAPIA-   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHh-cCCC---CceEEEEcCCCChHHHHHHHh-
Confidence            456789999999999999999999999999998888765432221 1111 1110   257888999999988877654 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc---c
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT---E  218 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~---~  218 (249)
                            ++|++||+|+...   ..  ..+.....+++|+.++..+.+++.+..   +.++||++||.+.+......   .
T Consensus        80 ------~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~~~v~~SS~~~~g~~~~~~~~~  145 (338)
T PLN00198         80 ------GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---SVKRVILTSSAAAVSINKLSGTGL  145 (338)
T ss_pred             ------cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeecceeeeccCCCCCCc
Confidence                  5899999998531   11  123345678999999999999976532   34699999998766532100   0


Q ss_pred             cccccc------ccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVS------GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~------~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..++..      .....++...|+.||.+.+.++++
T Consensus       146 ~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~  181 (338)
T PLN00198        146 VMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWK  181 (338)
T ss_pred             eeccccCCchhhhhhcCCccchhHHHHHHHHHHHHH
Confidence            011100      001234667899999999987653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.71  E-value=3.7e-16  Score=137.27  Aligned_cols=166  Identities=16%  Similarity=0.126  Sum_probs=113.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEE-EEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVV-MAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vi-l~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +.++||||+|+||.+++++|.++|++++ ++++.... ... ..+....    ...++.++.+|++|.+++++++++   
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~---   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVA----QSERFAFEKVDICDRAELARVFTE---   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcc----cCCceEEEECCCcChHHHHHHHhh---
Confidence            5799999999999999999999998754 45554221 111 1111100    013577889999999999888775   


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhh---c--CCCCeEEEEcCCccccCCCCccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLI---R--GSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~---~--~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                        .++|++||+||....    +.+.+.++..+++|+.++..+++++.+.|.   .  .+..++|++||.+.+....... 
T Consensus        73 --~~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~-  145 (355)
T PRK10217         73 --HQPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD-  145 (355)
T ss_pred             --cCCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC-
Confidence              269999999997532    233456789999999999999999987542   1  1234899999976443211111 


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       ...++..+..+...|+.||.+.+.+++.
T Consensus       146 -~~~~E~~~~~p~s~Y~~sK~~~e~~~~~  173 (355)
T PRK10217        146 -DFFTETTPYAPSSPYSASKASSDHLVRA  173 (355)
T ss_pred             -CCcCCCCCCCCCChhHHHHHHHHHHHHH
Confidence             0122233445677899999999888753

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.68  E-value=1.4e-15  Score=131.83  Aligned_cols=166  Identities=19%  Similarity=0.057  Sum_probs=112.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|++++||||+|+||.+++++|+++|++|+++.|+....+... ++....   +...++.++.+|+++.+.+.++++  
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~--   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTE-HLLALD---GAKERLKLFKADLLEESSFEQAIE--   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHH-HHHhcc---CCCCceEEEecCCCCcchHHHHHh--
Confidence            45789999999999999999999999999999999876544332 221110   111367889999999998877765  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc-CCCCccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV-GFVDTEDMN  221 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~-~~~~~~~~~  221 (249)
                           ++|++||+||.....     ..+...+.+++|+.++..+++++...   .+-++||++||.+++. +.....+-.
T Consensus        77 -----~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~  143 (322)
T PLN02986         77 -----GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEAND  143 (322)
T ss_pred             -----CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCC
Confidence                 489999999964211     11223567899999999999986432   1235899999987653 221110001


Q ss_pred             ccccccc-C-----CCcccchhhHHHHHhhhh
Q 025705          222 VVSGRRK-Y-----TSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       222 ~~~~~~~-~-----~~~~~Y~asKaal~~l~~  247 (249)
                      ..++... .     .+...|++||.+.+.+++
T Consensus       144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~  175 (322)
T PLN02986        144 VVDETFFSDPSLCRETKNWYPLSKILAENAAW  175 (322)
T ss_pred             CcCcccCCChHHhhccccchHHHHHHHHHHHH
Confidence            1111110 0     134679999999987665

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=1.1e-15  Score=127.37  Aligned_cols=154  Identities=21%  Similarity=0.202  Sum_probs=118.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ++|||||+|-||.+.+.+|++.|++|+++|.-.....+.+...           .+.+++.|+.|.+.+++++++.    
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----------~~~f~~gDi~D~~~L~~vf~~~----   66 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----------QFKFYEGDLLDRALLTAVFEEN----   66 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----------cCceEEeccccHHHHHHHHHhc----
Confidence            6899999999999999999999999999997554443333221           1578999999999999999874    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       +||.+||.||...-+.    +.+.-.+.++-|+.|+..|.+++    ++.+-..||| ||.++.+|.+..-++.+   .
T Consensus        67 -~idaViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vF-SStAavYG~p~~~PI~E---~  133 (329)
T COG1087          67 -KIDAVVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIF-SSTAAVYGEPTTSPISE---T  133 (329)
T ss_pred             -CCCEEEECccccccch----hhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEE-ecchhhcCCCCCcccCC---C
Confidence             7999999999754332    55666788999999999999885    4445557777 55566667655444443   3


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+..+||.||.+++.+.++
T Consensus       134 ~~~~p~NPYG~sKlm~E~iL~d  155 (329)
T COG1087         134 SPLAPINPYGRSKLMSEEILRD  155 (329)
T ss_pred             CCCCCCCcchhHHHHHHHHHHH
Confidence            4445778899999999998764

>PLN02583 cinnamoyl-CoA reductase

Probab=99.68  E-value=2e-15  Score=129.77  Aligned_cols=164  Identities=13%  Similarity=0.013  Sum_probs=109.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH--HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA--ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +-++++++||||+|+||++++++|+++|++|+++.|+...  ..+...++..      ...++.++.+|++|.+++.+++
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~------~~~~~~~~~~Dl~d~~~~~~~l   76 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC------EEERLKVFDVDPLDYHSILDAL   76 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc------CCCceEEEEecCCCHHHHHHHH
Confidence            3456899999999999999999999999999999986432  2222222211      1135788899999998876554


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC-CCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF-VDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~-~~~~  218 (249)
                      .       ..|.++|.++...     +.. +.+++++++|+.+++++++++.+.+   +.++||++||.+++... ....
T Consensus        77 ~-------~~d~v~~~~~~~~-----~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~  140 (297)
T PLN02583         77 K-------GCSGLFCCFDPPS-----DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNIS  140 (297)
T ss_pred             c-------CCCEEEEeCccCC-----ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCC
Confidence            3       5788888665321     111 2467899999999999999997764   23699999998776422 1000


Q ss_pred             ccccccccccC------CCcccchhhHHHHHhhhh
Q 025705          219 DMNVVSGRRKY------TSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       219 ~~~~~~~~~~~------~~~~~Y~asKaal~~l~~  247 (249)
                      +....++....      +....|+.||...+.+++
T Consensus       141 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~  175 (297)
T PLN02583        141 TQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAW  175 (297)
T ss_pred             CCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHH
Confidence            00011111110      112369999999988763

>PLN02650 dihydroflavonol-4-reductase

Probab=99.66  E-value=2.7e-15  Score=131.72  Aligned_cols=164  Identities=19%  Similarity=0.058  Sum_probs=113.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ..+++|||||+|.||.+++++|+++|++|++++|+.+......... .. .  +...++.++.+|++|.+.+.++++   
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~-~--~~~~~~~~v~~Dl~d~~~~~~~~~---   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL-DL-P--GATTRLTLWKADLAVEGSFDDAIR---   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH-hc-c--CCCCceEEEEecCCChhhHHHHHh---
Confidence            4578999999999999999999999999999999876554432221 10 1  111257888999999988877664   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          .+|++||+|+...   ...  .+..+..+++|+.++.++++++.+..   ..++||++||...+.+.....+  .+
T Consensus        77 ----~~d~ViH~A~~~~---~~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~--~~  142 (351)
T PLN02650         77 ----GCTGVFHVATPMD---FES--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKP--VY  142 (351)
T ss_pred             ----CCCEEEEeCCCCC---CCC--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCC--cc
Confidence                4899999998642   111  12235778999999999999987652   1258999999865543211100  01


Q ss_pred             ccc---------ccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGR---------RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~---------~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++.         ....+...|+.||.+.+.+++.
T Consensus       143 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  176 (351)
T PLN02650        143 DEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWK  176 (351)
T ss_pred             CcccCCchhhhhccccccchHHHHHHHHHHHHHH
Confidence            111         0112335799999999987753

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.65  E-value=5.8e-16  Score=130.50  Aligned_cols=150  Identities=17%  Similarity=0.213  Sum_probs=107.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ||||||+|.||.+++++|++.+. +|+++++++..+-+...++.+..+.......+..+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999986 7999999999999988888765443222123445678999999999888763    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|+++|.|+.-+.. ..+   +...+.+++|+.|+.++++++..+    +-.++|++|+--+.               
T Consensus        77 -~pdiVfHaAA~KhVp-l~E---~~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv---------------  132 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP-LME---DNPFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAV---------------  132 (293)
T ss_dssp             -T-SEEEE------HH-HHC---CCHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCS---------------
T ss_pred             -CCCEEEEChhcCCCC-hHH---hCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccC---------------
Confidence             799999999975422 222   345678999999999999998765    34589999996443               


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         .+...||+||...+.++.+
T Consensus       133 ---~PtnvmGatKrlaE~l~~~  151 (293)
T PF02719_consen  133 ---NPTNVMGATKRLAEKLVQA  151 (293)
T ss_dssp             ---S--SHHHHHHHHHHHHHHH
T ss_pred             ---CCCcHHHHHHHHHHHHHHH
Confidence               5678899999999887653

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.65  E-value=4.3e-15  Score=123.40  Aligned_cols=158  Identities=19%  Similarity=0.163  Sum_probs=121.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEc-----ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVR-----NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +.+|||||+|.||..+++.+.++.-  +|+.+|.     +.+.+    +.+..       ..+..++++|+.|.+.+.++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l----~~~~~-------~~~~~fv~~DI~D~~~v~~~   69 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL----ADVED-------SPRYRFVQGDICDRELVDRL   69 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH----Hhhhc-------CCCceEEeccccCHHHHHHH
Confidence            3589999999999999999999865  4676664     33333    22222       14789999999999999998


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++-     ++|+++|-|+-++    .|.+.+.-+..+++|+.|++.+..++..+..+   -+++.||.-..+......+
T Consensus        70 ~~~~-----~~D~VvhfAAESH----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~  137 (340)
T COG1088          70 FKEY-----QPDAVVHFAAESH----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDD  137 (340)
T ss_pred             HHhc-----CCCeEEEechhcc----ccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCC
Confidence            8863     7999999999765    34566777889999999999999998776533   4899999865544432211


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                        ....+..++.+.++|+|||||.++|+|.
T Consensus       138 --~~FtE~tp~~PsSPYSASKAasD~lVra  165 (340)
T COG1088         138 --DAFTETTPYNPSSPYSASKAASDLLVRA  165 (340)
T ss_pred             --CCcccCCCCCCCCCcchhhhhHHHHHHH
Confidence              1455678889999999999999999985

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.64  E-value=4.3e-15  Score=130.35  Aligned_cols=165  Identities=15%  Similarity=0.124  Sum_probs=112.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAH-VVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .++||||+|+||.+++++|+++|++ |+.+++..  ...+.. ..+.   .    ..++.++.+|++|.+++.+++++. 
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~---~----~~~~~~~~~Dl~d~~~~~~~~~~~-   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS---D----SERYVFEHADICDRAELDRIFAQH-   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc---c----CCceEEEEecCCCHHHHHHHHHhc-
Confidence            4899999999999999999999986 55455432  111111 1110   0    135778899999999999888752 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-----CCCeEEEEcCCccccCCCCcc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-----SPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                          ++|++||+||......    ..+..++.+++|+.++..+++++.++|...     +..++|++||...+.......
T Consensus        73 ----~~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  144 (352)
T PRK10084         73 ----QPDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPD  144 (352)
T ss_pred             ----CCCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccc
Confidence                6999999999753211    123346789999999999999998876421     234899999976543211000


Q ss_pred             ------ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 ------DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ------~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ....+++..+..+...|+.||.+.+.+++.
T Consensus       145 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  180 (352)
T PRK10084        145 EVENSEELPLFTETTAYAPSSPYSASKASSDHLVRA  180 (352)
T ss_pred             cccccccCCCccccCCCCCCChhHHHHHHHHHHHHH
Confidence                  001123334445667899999999988763

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.64  E-value=6.3e-15  Score=132.21  Aligned_cols=151  Identities=17%  Similarity=0.183  Sum_probs=126.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +.||+++||||+|.||.++++++++.+. ++++.+|++.++.....++++.++.    .++.++.+|+.|.+.+.++++.
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~----~~~~~~igdVrD~~~~~~~~~~  323 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPE----LKLRFYIGDVRDRDRVERAMEG  323 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCC----cceEEEecccccHHHHHHHHhc
Confidence            5899999999999999999999999987 7889999999998888888886652    5889999999999999998886


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .     ++|+++|+|+.-+- |..   +....+.+..|++|+.++++++...    +-.++|++|+--+.          
T Consensus       324 ~-----kvd~VfHAAA~KHV-Pl~---E~nP~Eai~tNV~GT~nv~~aa~~~----~V~~~V~iSTDKAV----------  380 (588)
T COG1086         324 H-----KVDIVFHAAALKHV-PLV---EYNPEEAIKTNVLGTENVAEAAIKN----GVKKFVLISTDKAV----------  380 (588)
T ss_pred             C-----CCceEEEhhhhccC-cch---hcCHHHHHHHhhHhHHHHHHHHHHh----CCCEEEEEecCccc----------
Confidence            3     69999999997542 333   2345677899999999999998665    33489999996555          


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              .+...||+||...+.++++
T Consensus       381 --------~PtNvmGaTKr~aE~~~~a  399 (588)
T COG1086         381 --------NPTNVMGATKRLAEKLFQA  399 (588)
T ss_pred             --------CCchHhhHHHHHHHHHHHH
Confidence                    5667899999999887653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.64  E-value=8.9e-15  Score=127.55  Aligned_cols=159  Identities=19%  Similarity=0.130  Sum_probs=109.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||++++++|+++|++|++++|...........+.+. .    ..++.++.+|++|.+.+.++++.     
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~Dl~d~~~~~~~~~~-----   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-G----GKHPTFVEGDIRNEALLTEILHD-----   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-c----CCCceEEEccCCCHHHHHHHHhc-----
Confidence            5899999999999999999999999999886533322222222221 1    12467788999999988887764     


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      .++|++||+||......    ..+.....+++|+.++..+++++    ++.+.+++|++||...+... ....   .++.
T Consensus        72 ~~~d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~-~~~~---~~E~  139 (338)
T PRK10675         72 HAIDTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQ-PKIP---YVES  139 (338)
T ss_pred             CCCCEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCC-CCCc---cccc
Confidence            36999999999753221    12334567899999999988764    44455689999997544321 1111   1222


Q ss_pred             ccC-CCcccchhhHHHHHhhhh
Q 025705          227 RKY-TSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       227 ~~~-~~~~~Y~asKaal~~l~~  247 (249)
                      .+. .+...|+.+|.+.+.+++
T Consensus       140 ~~~~~p~~~Y~~sK~~~E~~~~  161 (338)
T PRK10675        140 FPTGTPQSPYGKSKLMVEQILT  161 (338)
T ss_pred             cCCCCCCChhHHHHHHHHHHHH
Confidence            222 346789999999998876

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.64  E-value=6.8e-15  Score=126.63  Aligned_cols=159  Identities=16%  Similarity=0.112  Sum_probs=111.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChH-HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           67 TCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +++||||+|+||.+++++|+++|  ++|++++|... ...+..+.+..       ..++.++.+|++|++++.++++.. 
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~-   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-------NPRYRFVKGDIGDRELVSRLFTEH-   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-------CCCcEEEEcCCcCHHHHHHHHhhc-
Confidence            38999999999999999999987  68988876421 11111111111       125778899999999998887753 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++||+|+....    +.+.+..+..+++|+.++..+++++...+.   ..++|++||...+......   ..+
T Consensus        73 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~---~~~  138 (317)
T TIGR01181        73 ----QPDAVVHFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKG---DAF  138 (317)
T ss_pred             ----CCCEEEEcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCC---CCc
Confidence                59999999996532    223456678899999999999998765542   2479999997644332111   012


Q ss_pred             cccccCCCcccchhhHHHHHhhhh
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      .+..+..+...|+.+|++.+.+++
T Consensus       139 ~e~~~~~~~~~Y~~sK~~~e~~~~  162 (317)
T TIGR01181       139 TETTPLAPSSPYSASKAASDHLVR  162 (317)
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHH
Confidence            233344556789999999999876

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.63  E-value=6.2e-15  Score=127.62  Aligned_cols=165  Identities=16%  Similarity=0.051  Sum_probs=109.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++++||||+|.||.+++++|+++|++|++++|+....... ..+... .  ....++.++.+|++|.+.+.++++   
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~-~--~~~~~~~~~~~Dl~~~~~~~~~~~---   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLAL-D--GAKERLHLFKANLLEEGSFDSVVD---   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhc-c--CCCCceEEEeccccCcchHHHHHc---
Confidence            468999999999999999999999999999999886543322 121111 0  011367889999999988777654   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCCcccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVDTEDMNV  222 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~~~~~~~  222 (249)
                          ++|++||+|+.....     ..+..+..+++|+.++..+.+++....   +-.+||++||.+++ .+.....+...
T Consensus        76 ----~~d~Vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~  143 (322)
T PLN02662         76 ----GCEGVFHTASPFYHD-----VTDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVV  143 (322)
T ss_pred             ----CCCEEEEeCCcccCC-----CCChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCc
Confidence                579999999864211     111225788999999999999875432   33589999998653 22111100001


Q ss_pred             ccccccC-C-----CcccchhhHHHHHhhhh
Q 025705          223 VSGRRKY-T-----SLMGYSGSKLAQVKLET  247 (249)
Q Consensus       223 ~~~~~~~-~-----~~~~Y~asKaal~~l~~  247 (249)
                      .++.... |     ....|+.||.+.+.+++
T Consensus       144 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~  174 (322)
T PLN02662        144 VDETWFSDPAFCEESKLWYVLSKTLAEEAAW  174 (322)
T ss_pred             CCcccCCChhHhhcccchHHHHHHHHHHHHH
Confidence            1111111 1     22579999999988764

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.63  E-value=4.2e-15  Score=128.68  Aligned_cols=153  Identities=21%  Similarity=0.170  Sum_probs=109.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||.+++++|+++|++|++++|+++.....    ..        ..+.++.+|++|.++++++++      
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~--------~~~~~~~~D~~~~~~l~~~~~------   63 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----EG--------LDVEIVEGDLRDPASLRKAVA------   63 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----cc--------CCceEEEeeCCCHHHHHHHHh------
Confidence            689999999999999999999999999999986543211    11        257789999999988877664      


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       .+|++||+|+...   .   ..+..+..+++|+.++..+.+++..    .+.+++|++||...+.......+.++....
T Consensus        64 -~~d~vi~~a~~~~---~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~  132 (328)
T TIGR03466        64 -GCRALFHVAADYR---L---WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPS  132 (328)
T ss_pred             -CCCEEEEeceecc---c---CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCC
Confidence             5799999998532   1   1234567889999999999888653    344699999998766532111122222111


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+......|+.+|.+.+.++++
T Consensus       133 ~~~~~~~~Y~~sK~~~e~~~~~  154 (328)
T TIGR03466       133 SLDDMIGHYKRSKFLAEQAALE  154 (328)
T ss_pred             CcccccChHHHHHHHHHHHHHH
Confidence            2222345799999999888763

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.62  E-value=1.9e-14  Score=126.26  Aligned_cols=166  Identities=12%  Similarity=0.002  Sum_probs=112.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++++++||||+|-||.+++++|+++|++|++++|................... ...++.++.+|++|.+.+..+++ 
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEE-QWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccc-cCCceEEEEccCCCHHHHHHHhh-
Confidence            3566899999999999999999999999999999986543322222222111110 11357889999999887766654 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                            .+|++||.|+......    ..++....+++|+.++..+.+++.    +.+-.++|++||...+...... ...
T Consensus        90 ------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~----~~~~~~~v~~SS~~vyg~~~~~-~~~  154 (348)
T PRK15181         90 ------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAAR----DAHVSSFTYAASSSTYGDHPDL-PKI  154 (348)
T ss_pred             ------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeechHhhCCCCCC-CCC
Confidence                  4899999999753211    122344578999999999998863    3344589999997655432111 111


Q ss_pred             cccccccCCCcccchhhHHHHHhhhh
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                         +.....+...|+.||.+.+.+++
T Consensus       155 ---e~~~~~p~~~Y~~sK~~~e~~~~  177 (348)
T PRK15181        155 ---EERIGRPLSPYAVTKYVNELYAD  177 (348)
T ss_pred             ---CCCCCCCCChhhHHHHHHHHHHH
Confidence               11222455689999999998765

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.62  E-value=5.7e-15  Score=125.79  Aligned_cols=155  Identities=20%  Similarity=0.112  Sum_probs=113.4

Q ss_pred             EEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           69 IVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        69 lItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      |||||+|.||.+++++|+++|  ++|.++++++......  ....       .....++.+|++|.+++.++++      
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~-------~~~~~~~~~Di~d~~~l~~a~~------   65 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQK-------SGVKEYIQGDITDPESLEEALE------   65 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhc-------ccceeEEEeccccHHHHHHHhc------
Confidence            699999999999999999999  7898888876542211  1111       0123388999999999988876      


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       +.|++||.|+......     ....++.+++|+.|+-++.+++...    +-.++|++||.+++.......++...++.
T Consensus        66 -g~d~V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~VkrlVytSS~~vv~~~~~~~~~~~~dE~  135 (280)
T PF01073_consen   66 -GVDVVFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----GVKRLVYTSSISVVFDNYKGDPIINGDED  135 (280)
T ss_pred             -CCceEEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcCcceeEeccCCCCcccCCcC
Confidence             5799999999653221     3456789999999999999987543    45699999999988763333333333333


Q ss_pred             ccCC--CcccchhhHHHHHhhhhc
Q 025705          227 RKYT--SLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~--~~~~Y~asKaal~~l~~~  248 (249)
                      .+++  ....|+.||+..+.++.+
T Consensus       136 ~~~~~~~~~~Y~~SK~~AE~~V~~  159 (280)
T PF01073_consen  136 TPYPSSPLDPYAESKALAEKAVLE  159 (280)
T ss_pred             CcccccccCchHHHHHHHHHHHHh
Confidence            3333  556899999999988754

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.60  E-value=2.3e-14  Score=123.76  Aligned_cols=157  Identities=23%  Similarity=0.255  Sum_probs=109.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||.+++++|+++|++|++++|......+....+.+      . .++..+.+|+++.+++.++++.     
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~D~~~~~~~~~~~~~-----   68 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER------I-TRVTFVEGDLRDRELLDRLFEE-----   68 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc------c-cceEEEECCCCCHHHHHHHHHh-----
Confidence            379999999999999999999999999887643322222211111      0 1467889999999999888774     


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      +++|++|||||.....+    ..+...+.++.|+.++..+++++.    +.+.+++|++||...+ +.....   .+++.
T Consensus        69 ~~~d~vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~ss~~~~-g~~~~~---~~~e~  136 (328)
T TIGR01179        69 HKIDAVIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQ----QTGVKKFIFSSSAAVY-GEPSSI---PISED  136 (328)
T ss_pred             CCCcEEEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHH----hcCCCEEEEecchhhc-CCCCCC---Ccccc
Confidence            47999999999753221    223445678899999999988753    3344689999987544 321111   12233


Q ss_pred             ccCCCcccchhhHHHHHhhhh
Q 025705          227 RKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~  247 (249)
                      .+..+...|+.+|++.+.+++
T Consensus       137 ~~~~~~~~y~~sK~~~e~~~~  157 (328)
T TIGR01179       137 SPLGPINPYGRSKLMSERILR  157 (328)
T ss_pred             CCCCCCCchHHHHHHHHHHHH
Confidence            333466789999999998765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.57  E-value=5.3e-14  Score=118.44  Aligned_cols=164  Identities=15%  Similarity=0.126  Sum_probs=122.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++||||||+|-||.+.+.+|.++|+.|+++|.-.....+..+.+++....   ..++.+++.|+.|.+.+++++++.  
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~---~~~v~f~~~Dl~D~~~L~kvF~~~--   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGE---GKSVFFVEGDLNDAEALEKLFSEV--   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCC---CCceEEEEeccCCHHHHHHHHhhc--
Confidence            578999999999999999999999999999986554444555555554332   258999999999999999999885  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         .+|.++|-|+....++    +.+......+.|+.|++.+....    ++.+-..+|+.||+..+ |.+..-++.+  
T Consensus        77 ---~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvY-G~p~~ip~te--  142 (343)
T KOG1371|consen   77 ---KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVY-GLPTKVPITE--  142 (343)
T ss_pred             ---CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeee-cCcceeeccC--
Confidence               5999999999765433    33444778899999999988874    54455578887776544 4332222222  


Q ss_pred             ccccC-CCcccchhhHHHHHhhhhc
Q 025705          225 GRRKY-TSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~-~~~~~Y~asKaal~~l~~~  248 (249)
                       ..+. .+...|+.+|.+++.+.++
T Consensus       143 -~~~t~~p~~pyg~tK~~iE~i~~d  166 (343)
T KOG1371|consen  143 -EDPTDQPTNPYGKTKKAIEEIIHD  166 (343)
T ss_pred             -cCCCCCCCCcchhhhHHHHHHHHh
Confidence             1222 4778899999999988765

>PLN02686 cinnamoyl-CoA reductase

Probab=99.54  E-value=5.1e-13  Score=118.11  Aligned_cols=172  Identities=13%  Similarity=0.018  Sum_probs=110.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ...++|+++||||+|+||.+++++|+++|++|+++.|+.+..+.. +++...........++.++.+|++|.+.+.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            457789999999999999999999999999999988887654433 2221110000001247788999999999888776


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcc-ccCCC-Ccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMH-YVGFV-DTE  218 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~-~~~~~-~~~  218 (249)
                      .       +|.+||.|+.........    ..+...++|+.++..+.+++...   .+-.++|++||..+ .++.. ..+
T Consensus       128 ~-------~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~  193 (367)
T PLN02686        128 G-------CAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHD  193 (367)
T ss_pred             h-------ccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCC
Confidence            3       688888888653222111    11244577888888888886432   12348999999742 22210 000


Q ss_pred             ---ccccc---cccccCCCcccchhhHHHHHhhhh
Q 025705          219 ---DMNVV---SGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       219 ---~~~~~---~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                         .+++.   .......+...|+.||.+.+.+++
T Consensus       194 ~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~  228 (367)
T PLN02686        194 LPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAW  228 (367)
T ss_pred             CCcccCCCCCCChhhcccccchHHHHHHHHHHHHH
Confidence               01111   001122345679999999999875

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.51  E-value=8.7e-13  Score=112.45  Aligned_cols=162  Identities=17%  Similarity=0.092  Sum_probs=114.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .++.|+||||+|.||..++++|+++|+.|..+.|+++..+.+ +.+.+ .+.  ...+...+..|+.|.++++++++   
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~-l~~--a~~~l~l~~aDL~d~~sf~~ai~---   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRK-LEG--AKERLKLFKADLLDEGSFDKAID---   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHh-ccc--CcccceEEeccccccchHHHHHh---
Confidence            678999999999999999999999999999999999874332 22222 221  22468899999999999988877   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC-CCcccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF-VDTEDMNV  222 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~-~~~~~~~~  222 (249)
                          +.|+++|.|.......   .+  .-.++++..+.|+.++.+++...-   .-.+||++||+++.... +.+.+-..
T Consensus        78 ----gcdgVfH~Asp~~~~~---~~--~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~v  145 (327)
T KOG1502|consen   78 ----GCDGVFHTASPVDFDL---ED--PEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENSV  145 (327)
T ss_pred             ----CCCEEEEeCccCCCCC---CC--cHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCcc
Confidence                5899999988543221   11  223789999999999999986542   12489999999998865 33333333


Q ss_pred             ccccc-cC-----CCcccchhhHHHHHh
Q 025705          223 VSGRR-KY-----TSLMGYSGSKLAQVK  244 (249)
Q Consensus       223 ~~~~~-~~-----~~~~~Y~asKaal~~  244 (249)
                      .++.- .-     .....|+.||.-.+.
T Consensus       146 vdE~~wsd~~~~~~~~~~Y~~sK~lAEk  173 (327)
T KOG1502|consen  146 VDEESWSDLDFCRCKKLWYALSKTLAEK  173 (327)
T ss_pred             cccccCCcHHHHHhhHHHHHHHHHHHHH
Confidence            33210 00     011468888875543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.49  E-value=3.7e-13  Score=116.00  Aligned_cols=150  Identities=20%  Similarity=0.244  Sum_probs=98.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc--c
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG--R  145 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~--~  145 (249)
                      ++||||+|.||.+++++|+++|++++++.|+....... .               ....+|+.|..+.+.+++++.+  .
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~---------------~~~~~~~~d~~~~~~~~~~~~~~~~   65 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V---------------NLVDLDIADYMDKEDFLAQIMAGDD   65 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H---------------hhhhhhhhhhhhHHHHHHHHhcccc
Confidence            79999999999999999999999766665554322110 0               1123566666555555555432  3


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      ++++|++||+||.....   ..+.   +..++.|+.++..+.+++.    +.+ .++|++||...+..... .   ..++
T Consensus        66 ~~~~d~Vih~A~~~~~~---~~~~---~~~~~~n~~~t~~ll~~~~----~~~-~~~i~~SS~~vyg~~~~-~---~~~E  130 (308)
T PRK11150         66 FGDIEAIFHEGACSSTT---EWDG---KYMMDNNYQYSKELLHYCL----ERE-IPFLYASSAATYGGRTD-D---FIEE  130 (308)
T ss_pred             cCCccEEEECceecCCc---CCCh---HHHHHHHHHHHHHHHHHHH----HcC-CcEEEEcchHHhCcCCC-C---CCcc
Confidence            45799999999864322   1122   3468999999999888864    333 37999999866543211 1   1122


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+...|+.||.+.+.++++
T Consensus       131 ~~~~~p~~~Y~~sK~~~E~~~~~  153 (308)
T PRK11150        131 REYEKPLNVYGYSKFLFDEYVRQ  153 (308)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHH
Confidence            23334567899999998877653

>PLN02427 UDP-apiose/xylose synthase

Probab=99.49  E-value=6.9e-13  Score=117.98  Aligned_cols=130  Identities=15%  Similarity=0.124  Sum_probs=90.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +.+.++|+||||+|.||.+++++|+++ |++|++++|+.++.....    ... ......++.++.+|++|.+.+.++++
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~----~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL----EPD-TVPWSGRIQFHRINIKHDSRLEGLIK   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh----ccc-cccCCCCeEEEEcCCCChHHHHHHhh
Confidence            345568999999999999999999998 589999998765433221    100 00011358899999999988877664


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV  212 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~  212 (249)
                             .+|++||+|+........    +.-.+.+..|+.++..+.+++..    .+ .++|++||...+.
T Consensus        86 -------~~d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg  141 (386)
T PLN02427         86 -------MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYG  141 (386)
T ss_pred             -------cCCEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeC
Confidence                   379999999975422211    11223456799999888887632    23 5899999976543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.48  E-value=1e-12  Score=117.04  Aligned_cols=145  Identities=17%  Similarity=0.153  Sum_probs=103.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH--HHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE--LIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++++||||+|+||++++++|+++|++|++++|+..+.+.  ..++....      ...+.++.+|++|.+++.++++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~------~~~v~~v~~Dl~d~~~l~~~~~  131 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE------LPGAEVVFGDVTDADSLRKVLF  131 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh------cCCceEEEeeCCCHHHHHHHHH
Confidence            457799999999999999999999999999999998765421  11111111      1257889999999999998887


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ...   +++|++|||+|.....     .    ...+++|+.++..+.+++    ++.+.+++|++||.....        
T Consensus       132 ~~~---~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~--------  187 (390)
T PLN02657        132 SEG---DPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK--------  187 (390)
T ss_pred             HhC---CCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC--------
Confidence            541   2699999999853211     1    123567777777777765    444557899999986432        


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhh
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                                +...|..+|...+...+
T Consensus       188 ----------p~~~~~~sK~~~E~~l~  204 (390)
T PLN02657        188 ----------PLLEFQRAKLKFEAELQ  204 (390)
T ss_pred             ----------cchHHHHHHHHHHHHHH
Confidence                      23357778887776554

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.48  E-value=1e-12  Score=108.43  Aligned_cols=153  Identities=25%  Similarity=0.238  Sum_probs=111.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      |+||||+|-||.+++++|.++|+.|+.+.|+.........+           .++.++.+|+.|.+.++++++..     
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-----------~~~~~~~~dl~~~~~~~~~~~~~-----   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-----------LNVEFVIGDLTDKEQLEKLLEKA-----   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-----------TTEEEEESETTSHHHHHHHHHHH-----
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-----------ceEEEEEeecccccccccccccc-----
Confidence            69999999999999999999999988888776543322211           15789999999999999999886     


Q ss_pred             CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccc
Q 025705          148 PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRR  227 (249)
Q Consensus       148 ~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~  227 (249)
                      ++|.+||+|+...    ...+.+.....++.|+.++..+.+++..    .+..++|++||...+... ...+   .++..
T Consensus        65 ~~d~vi~~a~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~~y~~~-~~~~---~~e~~  132 (236)
T PF01370_consen   65 NIDVVIHLAAFSS----NPESFEDPEEIIEANVQGTRNLLEAARE----AGVKRFIFLSSASVYGDP-DGEP---IDEDS  132 (236)
T ss_dssp             TESEEEEEBSSSS----HHHHHHSHHHHHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGGGGTSS-SSSS---BETTS
T ss_pred             CceEEEEeecccc----cccccccccccccccccccccccccccc----cccccccccccccccccc-cccc---ccccc
Confidence            7999999999743    1112356678888898888888877643    344699999995444332 2111   23333


Q ss_pred             cCCCcccchhhHHHHHhhhhc
Q 025705          228 KYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       228 ~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+...|+.+|...+.+.++
T Consensus       133 ~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen  133 PINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             GCCHSSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccc
Confidence            335666699999998887653

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.47  E-value=1.4e-12  Score=123.83  Aligned_cols=165  Identities=16%  Similarity=0.077  Sum_probs=109.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAES--GAHVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .++++||||||+|.||.+++++|+++  |++|+.++|..  ....    .+....    ...++.++.+|++|.+.+..+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~----~l~~~~----~~~~v~~~~~Dl~d~~~~~~~   75 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK----NLNPSK----SSPNFKFVKGDIASADLVNYL   75 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh----hhhhcc----cCCCeEEEECCCCChHHHHHH
Confidence            45689999999999999999999998  67899888753  1111    111100    113678899999999887765


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +..     .++|++||+|+.....    ...+.....+++|+.++..+.+++...   ....++|++||...+... ..+
T Consensus        76 ~~~-----~~~D~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~-~~~  142 (668)
T PLN02260         76 LIT-----EGIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGET-DED  142 (668)
T ss_pred             Hhh-----cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCC-ccc
Confidence            433     3699999999975321    112233567799999999998886432   123589999997655332 111


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +.....+..+..+...|+.||.+.+.++++
T Consensus       143 ~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~  172 (668)
T PLN02260        143 ADVGNHEASQLLPTNPYSATKAGAEMLVMA  172 (668)
T ss_pred             cccCccccCCCCCCCCcHHHHHHHHHHHHH
Confidence            110011112223556899999999988763

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.46  E-value=3.2e-12  Score=111.97  Aligned_cols=167  Identities=18%  Similarity=0.131  Sum_probs=104.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHH---HHHHHHHHhhcCC-CCC-CceEEEEccCCCHHH--HHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAAN---ELIQKWQEEWSGK-GLP-LNIEAMELDLLSLDS--VVR  137 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~---~~~~~~~~~~~~~-~~~-~~v~~~~~D~~~~~~--v~~  137 (249)
                      +++||||+|+||.+++++|+++|  ++|+++.|+.+...   ...+.+....... ... .++.++.+|++++..  -..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  78999999765321   2222221110000 000 368899999986531  011


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ..+++.   ..+|++||||+.....       ..++...++|+.++..+.+.+..    .+..+++++||...+......
T Consensus        81 ~~~~~~---~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~~~~~~  146 (367)
T TIGR01746        81 EWERLA---ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLAAIDLS  146 (367)
T ss_pred             HHHHHH---hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccCCcCCC
Confidence            112221   3699999999965311       23566788999999998887644    333469999998776542111


Q ss_pred             cccccccc--cccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSG--RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~--~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      + ..+...  .........|+.||.+.+.++++
T Consensus       147 ~-~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  178 (367)
T TIGR01746       147 T-VTEDDAIVTPPPGLAGGYAQSKWVAELLVRE  178 (367)
T ss_pred             C-ccccccccccccccCCChHHHHHHHHHHHHH
Confidence            0 011000  01112345799999999988753

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.46  E-value=1.6e-12  Score=113.91  Aligned_cols=154  Identities=10%  Similarity=0.020  Sum_probs=102.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC-CHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL-SLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~~~  143 (249)
                      ++++||||+|.||.+++++|++. |++|++++|+.+....    +..   .    ..+.++.+|++ +.+.+.++++   
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~---~----~~~~~~~~Dl~~~~~~~~~~~~---   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN---H----PRMHFFEGDITINKEWIEYHVK---   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc---C----CCeEEEeCCCCCCHHHHHHHHc---
Confidence            46999999999999999999986 6999999987543221    111   1    25788899998 5665544432   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++||+|+......    ..++.+..+++|+.++..+.+++..    .+ .++|++||...+... ....+...
T Consensus        68 ----~~d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~-~~~~~~ee  133 (347)
T PRK11908         68 ----KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMC-PDEEFDPE  133 (347)
T ss_pred             ----CCCEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccC-CCcCcCcc
Confidence                5899999999754221    1223356789999999988887643    33 589999998654322 11111111


Q ss_pred             ccc----ccCCCcccchhhHHHHHhhhh
Q 025705          224 SGR----RKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       224 ~~~----~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ...    ....+...|+.||.+.+.+++
T Consensus       134 ~~~~~~~~~~~p~~~Y~~sK~~~e~~~~  161 (347)
T PRK11908        134 ASPLVYGPINKPRWIYACSKQLMDRVIW  161 (347)
T ss_pred             ccccccCcCCCccchHHHHHHHHHHHHH
Confidence            100    001234579999999887765

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.46  E-value=1.2e-12  Score=112.60  Aligned_cols=140  Identities=16%  Similarity=0.141  Sum_probs=101.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ++|||||+|.||.+++++|.++| +|+.++|...                       .+..|++|.+.+.++++..    
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------------~~~~Dl~d~~~~~~~~~~~----   53 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------------DYCGDFSNPEGVAETVRKI----   53 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------------cccCCCCCHHHHHHHHHhc----
Confidence            59999999999999999999999 7888887521                       1347999999998887753    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++||+|+......    ..++-+..+++|+.++..+.+++...    + .++|++||...+.+. ...+   +++.
T Consensus        54 -~~D~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~Ss~~Vy~~~-~~~p---~~E~  119 (299)
T PRK09987         54 -RPDVIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYSTDYVFPGT-GDIP---WQET  119 (299)
T ss_pred             -CCCEEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEccceEECCC-CCCC---cCCC
Confidence             5899999999754221    22234566789999999999887442    3 479999997655332 1111   2233


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+...|+.||.+.+.+++.
T Consensus       120 ~~~~P~~~Yg~sK~~~E~~~~~  141 (299)
T PRK09987        120 DATAPLNVYGETKLAGEKALQE  141 (299)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH
Confidence            3445667899999999998753

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.46  E-value=2.2e-12  Score=108.08  Aligned_cols=123  Identities=22%  Similarity=0.270  Sum_probs=87.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~  139 (249)
                      ...++++++||||+|+||++++++|+++|++|+++.|+.++.+....   .       ..++.++.+|+++. +.+   .
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~-------~~~~~~~~~Dl~d~~~~l---~   79 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---Q-------DPSLQIVRADVTEGSDKL---V   79 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---c-------CCceEEEEeeCCCCHHHH---H
Confidence            34567899999999999999999999999999999999765433211   0       12578889999983 332   2


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      +.+.   .++|++|+|+|.......        ...+++|+.++..+++++    .+.+.++||++||...+
T Consensus        80 ~~~~---~~~d~vi~~~g~~~~~~~--------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~  136 (251)
T PLN00141         80 EAIG---DDSDAVICATGFRRSFDP--------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVN  136 (251)
T ss_pred             HHhh---cCCCEEEECCCCCcCCCC--------CCceeeehHHHHHHHHHH----HHcCCCEEEEEcccccc
Confidence            2221   269999999986421111        112468888888888885    44556799999998654

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.45  E-value=2.3e-12  Score=114.13  Aligned_cols=158  Identities=18%  Similarity=0.123  Sum_probs=104.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++++||||+|.||.+++++|.++|++|++++|......      ..    ..  ..+.++.+|+++.+.+..+++   
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~----~~--~~~~~~~~Dl~d~~~~~~~~~---   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SE----DM--FCHEFHLVDLRVMENCLKVTK---   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------cc----cc--ccceEEECCCCCHHHHHHHHh---
Confidence            5689999999999999999999999999999998643210      00    00  124677899999887766543   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc-cccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE-DMNV  222 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~-~~~~  222 (249)
                          ++|++||.|+.........   ......+..|+.++..+.+++.    +.+-.++|++||...+......+ +...
T Consensus        85 ----~~D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa~----~~~vk~~V~~SS~~vYg~~~~~~~~~~~  153 (370)
T PLN02695         85 ----GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAAR----INGVKRFFYASSACIYPEFKQLETNVSL  153 (370)
T ss_pred             ----CCCEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHHH----HhCCCEEEEeCchhhcCCccccCcCCCc
Confidence                5899999998643222111   1223456789999988888763    33445899999976543221100 0001


Q ss_pred             -ccccccCCCcccchhhHHHHHhhhh
Q 025705          223 -VSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       223 -~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                       ++...+..+...|+.+|.+.+.+++
T Consensus       154 ~E~~~~p~~p~s~Yg~sK~~~E~~~~  179 (370)
T PLN02695        154 KESDAWPAEPQDAYGLEKLATEELCK  179 (370)
T ss_pred             CcccCCCCCCCCHHHHHHHHHHHHHH
Confidence             1111134566789999999998764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.45  E-value=1.7e-12  Score=111.89  Aligned_cols=150  Identities=15%  Similarity=0.097  Sum_probs=101.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ++||||+|.||.+++++|.++|+ .|++++|..... . ..++           ....+..|+.+.+.++.+.+.   .+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~-----------~~~~~~~d~~~~~~~~~~~~~---~~   64 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL-----------ADLVIADYIDKEDFLDRLEKG---AF   64 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh-----------hheeeeccCcchhHHHHHHhh---cc
Confidence            58999999999999999999998 788887754321 1 1111           112456788887776665543   24


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      .++|++||+|+....      +.++.+..+++|+.++..+.+++..    .+ .++|++||...+... . ..+.+.+  
T Consensus        65 ~~~D~vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~-~-~~~~e~~--  129 (314)
T TIGR02197        65 GKIEAIFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDG-E-AGFREGR--  129 (314)
T ss_pred             CCCCEEEECccccCc------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCC-C-CCccccc--
Confidence            579999999996431      2334567889999999999988643    23 479999997654322 1 1111111  


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ....+...|+.||.+.+.++++
T Consensus       130 ~~~~p~~~Y~~sK~~~e~~~~~  151 (314)
T TIGR02197       130 ELERPLNVYGYSKFLFDQYVRR  151 (314)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHH
Confidence            1123566899999999988763

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.44  E-value=2.2e-12  Score=109.90  Aligned_cols=136  Identities=24%  Similarity=0.316  Sum_probs=100.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      ++||||+|.||.+++++|.++|++|++++|+                           .+|+.+.+.++++++..     
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------------~~d~~~~~~~~~~~~~~-----   49 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------------QLDLTDPEALERLLRAI-----   49 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------------ccCCCCHHHHHHHHHhC-----
Confidence            7999999999999999999999999998874                           36999999998887653     


Q ss_pred             CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccc
Q 025705          148 PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRR  227 (249)
Q Consensus       148 ~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~  227 (249)
                      ++|++||+||......    ..+..+..+++|+.++..+.+++..    .+ .++|++||...+.+. ....   +++..
T Consensus        50 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~-~~~~---~~E~~  116 (287)
T TIGR01214        50 RPDAVVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGE-GKRP---YREDD  116 (287)
T ss_pred             CCCEEEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCC-CCCC---CCCCC
Confidence            6899999999653211    2234567789999999999988643    23 489999997655332 1111   22222


Q ss_pred             cCCCcccchhhHHHHHhhhhc
Q 025705          228 KYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       228 ~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+...|+.+|.+.+.+++.
T Consensus       117 ~~~~~~~Y~~~K~~~E~~~~~  137 (287)
T TIGR01214       117 ATNPLNVYGQSKLAGEQAIRA  137 (287)
T ss_pred             CCCCcchhhHHHHHHHHHHHH
Confidence            223456899999999988764

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.43  E-value=2.7e-12  Score=121.67  Aligned_cols=158  Identities=13%  Similarity=0.034  Sum_probs=105.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH-HHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS-VVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~  140 (249)
                      .++++|+||||+|.||.+++++|+++ |++|+.++|+.......    ..       ..++.++.+|++|.+. ++++++
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~~-------~~~~~~~~gDl~d~~~~l~~~l~  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----LG-------HPRFHFVEGDISIHSEWIEYHIK  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----cC-------CCceEEEeccccCcHHHHHHHhc
Confidence            45788999999999999999999986 79999999976432211    11       1257888999998654 333332


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                             ++|++||+|+.......    .+..+..+++|+.++..+.+++...    + .++|++||...+ +.......
T Consensus       382 -------~~D~ViHlAa~~~~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vy-g~~~~~~~  444 (660)
T PRK08125        382 -------KCDVVLPLVAIATPIEY----TRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVY-GMCTDKYF  444 (660)
T ss_pred             -------CCCEEEECccccCchhh----ccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhc-CCCCCCCc
Confidence                   58999999997643221    1223457889999999999887543    3 489999997554 32111111


Q ss_pred             cccccc---ccC-CCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGR---RKY-TSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~---~~~-~~~~~Y~asKaal~~l~~~  248 (249)
                      ++....   .+. .+...|+.||.+.+.+++.
T Consensus       445 ~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~  476 (660)
T PRK08125        445 DEDTSNLIVGPINKQRWIYSVSKQLLDRVIWA  476 (660)
T ss_pred             CccccccccCCCCCCccchHHHHHHHHHHHHH
Confidence            111100   011 2345799999999988753

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.39  E-value=6.1e-12  Score=113.69  Aligned_cols=155  Identities=15%  Similarity=0.075  Sum_probs=103.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +++.|+||||+|.||.+++++|+++|++|++++|......+.   +......    .++.++..|+.+..     +    
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~----~~~~~i~~D~~~~~-----l----  181 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSN----PNFELIRHDVVEPI-----L----  181 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccC----CceEEEECCccChh-----h----
Confidence            568899999999999999999999999999998754322111   1111111    35677888986652     1    


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                         .++|++||.|+.......    .++.+..+++|+.++..+.+++..    .+ .++|++||...+......+ ..+.
T Consensus       182 ---~~~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p-~~E~  248 (442)
T PLN02206        182 ---LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHP-QVET  248 (442)
T ss_pred             ---cCCCEEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCC-CCcc
Confidence               158999999987542211    123457889999999999988743    23 3899999987654321111 1110


Q ss_pred             --cccccCCCcccchhhHHHHHhhhh
Q 025705          224 --SGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       224 --~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                        ....+..+...|+.||.+.+.+++
T Consensus       249 ~~~~~~P~~~~s~Y~~SK~~aE~~~~  274 (442)
T PLN02206        249 YWGNVNPIGVRSCYDEGKRTAETLTM  274 (442)
T ss_pred             ccccCCCCCccchHHHHHHHHHHHHH
Confidence              111233346789999999988775

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.39  E-value=6.5e-12  Score=108.00  Aligned_cols=152  Identities=23%  Similarity=0.191  Sum_probs=105.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      +|||||+|.||.+++.+|.++|++|+.++|...+.....             ..+.++.+|+++.+.+.+..+..     
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~-----   64 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------------SGVEFVVLDLTDRDLVDELAKGV-----   64 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------------cccceeeecccchHHHHHHHhcC-----
Confidence            899999999999999999999999999999876543221             14678889999985555544421     


Q ss_pred             CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc-
Q 025705          148 PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR-  226 (249)
Q Consensus       148 ~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~-  226 (249)
                      . |.+||+|+........  .. .....+++|+.++..+.+++..    .+..++|+.||...+.+. ....  ..++. 
T Consensus        65 ~-d~vih~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~-~~~~--~~~E~~  133 (314)
T COG0451          65 P-DAVIHLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGD-PPPL--PIDEDL  133 (314)
T ss_pred             C-CEEEEccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCC-CCCC--Cccccc
Confidence            1 9999999976422111  11 3456899999999999999755    344589996665555543 1111  11221 


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+...|+.||.+.+.++++
T Consensus       134 ~~~~p~~~Yg~sK~~~E~~~~~  155 (314)
T COG0451         134 GPPRPLNPYGVSKLAAEQLLRA  155 (314)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH
Confidence            2222222799999999988764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.35  E-value=5.6e-12  Score=107.82  Aligned_cols=137  Identities=24%  Similarity=0.282  Sum_probs=97.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ++||||++|-||.++.+.|.++|++|+.++|+                           .+|++|.+.+.+++++.    
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------------~~dl~d~~~~~~~~~~~----   50 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------------DLDLTDPEAVAKLLEAF----   50 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------------CS-TTSHHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------------hcCCCCHHHHHHHHHHh----
Confidence            58999999999999999999999999988765                           47999999999998876    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++||+||....    +.-+++-+..+.+|+.++..+.+.+..     .+.++|++||...+-|....    -|.+.
T Consensus        51 -~pd~Vin~aa~~~~----~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~----~y~E~  116 (286)
T PF04321_consen   51 -KPDVVINCAAYTNV----DACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGG----PYTED  116 (286)
T ss_dssp             ---SEEEE------H----HHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSS----SB-TT
T ss_pred             -CCCeEeccceeecH----HhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCccc----ccccC
Confidence             69999999997521    122345677899999999999998743     23699999998766664211    13444


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ....+...||-+|...+..+++
T Consensus       117 d~~~P~~~YG~~K~~~E~~v~~  138 (286)
T PF04321_consen  117 DPPNPLNVYGRSKLEGEQAVRA  138 (286)
T ss_dssp             S----SSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH
Confidence            4556778999999999988764

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.33  E-value=3.1e-11  Score=104.61  Aligned_cols=133  Identities=20%  Similarity=0.137  Sum_probs=95.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|.||.+++++|+++|++|.+++|+.++....    ..        ..+.++.+|++|++++.++++      
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~--------~~v~~v~~Dl~d~~~l~~al~------   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE--------WGAELVYGDLSLPETLPPSFK------   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh--------cCCEEEECCCCCHHHHHHHHC------
Confidence            589999999999999999999999999999986543221    11        247889999999988876654      


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++||+++....         +.....++|+.++.++.+++.    +.+-.++|++||..+..              
T Consensus        64 -g~d~Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~----~~gvkr~I~~Ss~~~~~--------------  115 (317)
T CHL00194         64 -GVTAIIDASTSRPS---------DLYNAKQIDWDGKLALIEAAK----AAKIKRFIFFSILNAEQ--------------  115 (317)
T ss_pred             -CCCEEEECCCCCCC---------CccchhhhhHHHHHHHHHHHH----HcCCCEEEEeccccccc--------------
Confidence             58999998764211         122356678888887777763    33445899999854221              


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         .+...|..+|...+.+.++
T Consensus       116 ---~~~~~~~~~K~~~e~~l~~  134 (317)
T CHL00194        116 ---YPYIPLMKLKSDIEQKLKK  134 (317)
T ss_pred             ---cCCChHHHHHHHHHHHHHH
Confidence               1224577888887776553

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.32  E-value=4.5e-12  Score=104.66  Aligned_cols=102  Identities=13%  Similarity=0.119  Sum_probs=79.4

Q ss_pred             CEEEEeC-CCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTG-STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItG-as~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+=.||. ++||||+++|++|+++|++|+++++.. .       +..          .....+|+++.++++++++++.+
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~-~-------l~~----------~~~~~~Dv~d~~s~~~l~~~v~~   76 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR-A-------LKP----------EPHPNLSIREIETTKDLLITLKE   76 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh-h-------ccc----------ccCCcceeecHHHHHHHHHHHHH
Confidence            3445666 467999999999999999999988631 1       000          00135899999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI  188 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  188 (249)
                      .++++|++|||||+....++.+.+.++|++++.   .+.|++++
T Consensus        77 ~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        77 LVQEHDILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             HcCCCCEEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence            999999999999988777888899999997754   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.32  E-value=4e-11  Score=108.24  Aligned_cols=156  Identities=13%  Similarity=0.076  Sum_probs=102.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +..+++||||+|.||.+++++|+++|++|++++|...........+.   .    ..++.++..|+.+..     +    
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~----~~~~~~~~~Di~~~~-----~----  182 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---G----NPRFELIRHDVVEPI-----L----  182 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---c----CCceEEEECcccccc-----c----
Confidence            34679999999999999999999999999999986432211111111   1    125677788886542     1    


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                         .++|++||+|+.......    .++-...+++|+.++..+..++...    + .++|++||...+..... ...++.
T Consensus       183 ---~~~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~-~p~~E~  249 (436)
T PLN02166        183 ---LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLE-HPQKET  249 (436)
T ss_pred             ---cCCCEEEECceeccchhh----ccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCC-CCCCcc
Confidence               258999999986533211    1233578899999999998887442    3 38999999765543211 111111


Q ss_pred             --cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 --SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 --~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                        ....+..+...|+.||.+.+.++++
T Consensus       250 ~~~~~~p~~p~s~Yg~SK~~aE~~~~~  276 (436)
T PLN02166        250 YWGNVNPIGERSCYDEGKRTAETLAMD  276 (436)
T ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHH
Confidence              0112334456899999999987653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.31  E-value=2e-11  Score=104.81  Aligned_cols=140  Identities=16%  Similarity=0.108  Sum_probs=95.0

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCCC
Q 025705           69 IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGP  148 (249)
Q Consensus        69 lItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~  148 (249)
                      |||||+|.||.++++.|+++|++|+++.+.                          ..+|+++.++++++++..     +
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------------~~~Dl~~~~~l~~~~~~~-----~   49 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------------KELDLTRQADVEAFFAKE-----K   49 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------------ccCCCCCHHHHHHHHhcc-----C
Confidence            699999999999999999999987765422                          147999999888877762     5


Q ss_pred             ccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc--
Q 025705          149 LHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR--  226 (249)
Q Consensus       149 id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~--  226 (249)
                      +|++||+|+.......   ..+..+..+++|+.++..+.+++..    .+-.++|++||...+.+. ...+.++.+..  
T Consensus        50 ~d~Vih~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~-~~~~~~E~~~~~~  121 (306)
T PLN02725         50 PTYVILAAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKF-APQPIPETALLTG  121 (306)
T ss_pred             CCEEEEeeeeecccch---hhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCC-CCCCCCHHHhccC
Confidence            8999999997431111   1122345688999999988888743    344689999997654322 22222221100  


Q ss_pred             ccCCCcccchhhHHHHHhhhh
Q 025705          227 RKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ...|....|+.||.+.+.+++
T Consensus       122 ~~~p~~~~Y~~sK~~~e~~~~  142 (306)
T PLN02725        122 PPEPTNEWYAIAKIAGIKMCQ  142 (306)
T ss_pred             CCCCCcchHHHHHHHHHHHHH
Confidence            111223459999999987664

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.31  E-value=4e-11  Score=100.76  Aligned_cols=135  Identities=21%  Similarity=0.210  Sum_probs=108.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      +||||++|-+|.++++.|. .+.+|+.++|..                           +|++|.+.+.+++++.     
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------------~Ditd~~~v~~~i~~~-----   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------------LDITDPDAVLEVIRET-----   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------------ccccChHHHHHHHHhh-----
Confidence            8999999999999999999 778999888752                           7999999999999986     


Q ss_pred             CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccc
Q 025705          148 PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRR  227 (249)
Q Consensus       148 ~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~  227 (249)
                      ++|++||+|++..    .+.-+.+-+..+.+|..++-++++++-..     +..+|++|+-..+-|.-+    +-|.+..
T Consensus        50 ~PDvVIn~AAyt~----vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVFDG~~~----~~Y~E~D  116 (281)
T COG1091          50 RPDVVINAAAYTA----VDKAESEPELAFAVNATGAENLARAAAEV-----GARLVHISTDYVFDGEKG----GPYKETD  116 (281)
T ss_pred             CCCEEEECccccc----cccccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEecCCCC----CCCCCCC
Confidence            7999999999853    23344556788999999999999997432     468999999776666521    2244455


Q ss_pred             cCCCcccchhhHHHHHhhhhc
Q 025705          228 KYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       228 ~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ...+...||.||.+-+..+++
T Consensus       117 ~~~P~nvYG~sKl~GE~~v~~  137 (281)
T COG1091         117 TPNPLNVYGRSKLAGEEAVRA  137 (281)
T ss_pred             CCCChhhhhHHHHHHHHHHHH
Confidence            557888999999999988764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.29  E-value=5.5e-11  Score=99.61  Aligned_cols=162  Identities=19%  Similarity=0.171  Sum_probs=89.8

Q ss_pred             EeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCC--------CCCceEEEEccCCCHHH-H-HH
Q 025705           70 VTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKG--------LPLNIEAMELDLLSLDS-V-VR  137 (249)
Q Consensus        70 ItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~D~~~~~~-v-~~  137 (249)
                      ||||+|.||.++.++|++++.  +|+++.|.... +...+++.+.....+        ...+++++.+|++++.- + ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~-~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS-QSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH-HHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc-ccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999986  89999997633 122233322211110        12589999999998541 1 11


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ..+++.+   .+|++||||+......       .+++..++|+.|+..+.+.+..    .+..++++||| +...+. ..
T Consensus        80 ~~~~L~~---~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iST-a~v~~~-~~  143 (249)
T PF07993_consen   80 DYQELAE---EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYIST-AYVAGS-RP  143 (249)
T ss_dssp             HHHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEE-GGGTTS--T
T ss_pred             Hhhcccc---ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHh----ccCcceEEecc-ccccCC-CC
Confidence            1222222   5899999999654221       3445778999999999998753    22339999999 322222 11


Q ss_pred             ccc-------ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDM-------NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~-------~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ...       ..............|..||...+.++++
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~  181 (249)
T PF07993_consen  144 GTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLRE  181 (249)
T ss_dssp             TT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHH
T ss_pred             CcccccccccccccchhhccCCccHHHHHHHHHHHHHH
Confidence            111       1111223335556899999999998764

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.28  E-value=1.7e-10  Score=99.22  Aligned_cols=143  Identities=15%  Similarity=0.027  Sum_probs=90.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.+|||||+|.||.+++++|+++|++|+...                              .|+.+.+.+...++..  
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------------~~~~~~~~v~~~l~~~--   56 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------------GRLENRASLEADIDAV--   56 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------------CccCCHHHHHHHHHhc--
Confidence            46799999999999999999999999886422                              2344555555544432  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc--cccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE--DMNV  222 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~--~~~~  222 (249)
                         ++|++||+||....... +...+.-...+++|+.++..+.+++...    +- +.+++||...+......+  +...
T Consensus        57 ---~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv-~~v~~sS~~vy~~~~~~p~~~~~~  127 (298)
T PLN02778         57 ---KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRER----GL-VLTNYATGCIFEYDDAHPLGSGIG  127 (298)
T ss_pred             ---CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-CEEEEecceEeCCCCCCCcccCCC
Confidence               68999999997642211 1122445678999999999999987543    22 345555543322111000  0001


Q ss_pred             ccc-cccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSG-RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~-~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +++ ..+.++...|+.||.+.+.+++.
T Consensus       128 ~~Ee~~p~~~~s~Yg~sK~~~E~~~~~  154 (298)
T PLN02778        128 FKEEDTPNFTGSFYSKTKAMVEELLKN  154 (298)
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHH
Confidence            121 12233456899999999998764

>PLN02996 fatty acyl-CoA reductase

Probab=99.28  E-value=1e-10  Score=107.17  Aligned_cols=133  Identities=13%  Similarity=0.169  Sum_probs=88.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEEcChHH--HH-HHHHHH---------HHhhcCC---CCCCceEE
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA---HVVMAVRNLKA--AN-ELIQKW---------QEEWSGK---GLPLNIEA  124 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~---~Vil~~r~~~~--~~-~~~~~~---------~~~~~~~---~~~~~v~~  124 (249)
                      ++||+|+||||+|.||+.++++|++.+-   +|+++.|....  .+ ....++         .+..+..   ....++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            5789999999999999999999998653   57888886531  11 111111         1111100   00147899


Q ss_pred             EEccCCC-------HHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC
Q 025705          125 MELDLLS-------LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG  197 (249)
Q Consensus       125 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~  197 (249)
                      +.+|+++       .+.++++++       ++|++||+|+....   .    +..+..+++|+.|+..+.+++...   .
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~---~  151 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKKC---V  151 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHhc---C
Confidence            9999984       333434332       58999999997532   1    245778899999999998887442   1


Q ss_pred             CCCeEEEEcCCcccc
Q 025705          198 SPSRIINVNSVMHYV  212 (249)
Q Consensus       198 ~~g~Iv~vsS~~~~~  212 (249)
                      +-.++|++||...+.
T Consensus       152 ~~k~~V~vST~~vyG  166 (491)
T PLN02996        152 KVKMLLHVSTAYVCG  166 (491)
T ss_pred             CCCeEEEEeeeEEec
Confidence            234899999976553

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.27  E-value=1.9e-10  Score=91.47  Aligned_cols=132  Identities=21%  Similarity=0.219  Sum_probs=96.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      |+|+||+|.+|+.++++|+++|++|.++.|++++.++      .        .++.++.+|+.|.+++.+.++       
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~--------~~~~~~~~d~~d~~~~~~al~-------   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------S--------PGVEIIQGDLFDPDSVKAALK-------   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------C--------TTEEEEESCTTCHHHHHHHHT-------
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------c--------cccccceeeehhhhhhhhhhh-------
Confidence            6899999999999999999999999999999987765      1        478999999999988877655       


Q ss_pred             CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccc
Q 025705          148 PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRR  227 (249)
Q Consensus       148 ~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~  227 (249)
                      +.|.+|+++|....        +             ...++.++..+++.+..++|++|+...+......    +..  .
T Consensus        60 ~~d~vi~~~~~~~~--------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~----~~~--~  112 (183)
T PF13460_consen   60 GADAVIHAAGPPPK--------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGL----FSD--E  112 (183)
T ss_dssp             TSSEEEECCHSTTT--------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSE----EEG--G
T ss_pred             hcchhhhhhhhhcc--------c-------------ccccccccccccccccccceeeeccccCCCCCcc----ccc--c
Confidence            68999999975432        0             4455666666777777799999998765543211    000  0


Q ss_pred             cCCCcccchhhHHHHHhhhh
Q 025705          228 KYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       228 ~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+....|...|...+.+.+
T Consensus       113 ~~~~~~~~~~~~~~~e~~~~  132 (183)
T PF13460_consen  113 DKPIFPEYARDKREAEEALR  132 (183)
T ss_dssp             TCGGGHHHHHHHHHHHHHHH
T ss_pred             cccchhhhHHHHHHHHHHHH
Confidence            11223567777776666554

...

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.24  E-value=1.8e-10  Score=109.20  Aligned_cols=158  Identities=18%  Similarity=0.128  Sum_probs=101.9

Q ss_pred             EEEEeCCCCchHHHHHHHHH--HcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH--HHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLA--ESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV--VRFSEAW  142 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~--~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v--~~~~~~~  142 (249)
                      +++||||+|.||.+++++|+  ++|++|++++|+... . ..+.+.....    ..++.++.+|++|.+..  ...++++
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~-~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~~l   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-S-RLEALAAYWG----ADRVVPLVGDLTEPGLGLSEADIAEL   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-H-HHHHHHHhcC----CCcEEEEecccCCccCCcCHHHHHHh
Confidence            59999999999999999999  589999999996532 1 1122222111    13688899999985311  1122222


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                          .++|++||+||.....       ...+...++|+.++..+.+++.    +.+..++|++||...+.....  ..++
T Consensus        76 ----~~~D~Vih~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a~----~~~~~~~v~~SS~~v~g~~~~--~~~e  138 (657)
T PRK07201         76 ----GDIDHVVHLAAIYDLT-------ADEEAQRAANVDGTRNVVELAE----RLQAATFHHVSSIAVAGDYEG--VFRE  138 (657)
T ss_pred             ----cCCCEEEECceeecCC-------CCHHHHHHHHhHHHHHHHHHHH----hcCCCeEEEEeccccccCccC--cccc
Confidence                3799999999975321       1234567889999888887753    334468999999866532211  0111


Q ss_pred             ccccccCCCcccchhhHHHHHhhhh
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ............|+.||...+.+++
T Consensus       139 ~~~~~~~~~~~~Y~~sK~~~E~~~~  163 (657)
T PRK07201        139 DDFDEGQGLPTPYHRTKFEAEKLVR  163 (657)
T ss_pred             ccchhhcCCCCchHHHHHHHHHHHH
Confidence            1001112334679999999998876

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.24  E-value=7.9e-11  Score=102.33  Aligned_cols=160  Identities=18%  Similarity=0.104  Sum_probs=113.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++.+++||||+|.+|++++.+|.+++  ..|.++|..+....-..++...      ...++.++.+|+.|...+.+.++ 
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~------~~~~v~~~~~D~~~~~~i~~a~~-   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF------RSGRVTVILGDLLDANSISNAFQ-   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc------cCCceeEEecchhhhhhhhhhcc-
Confidence            46889999999999999999999998  6899999876421111111110      12578999999999988877655 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                            +. .+||+|+...+.    .-..+-+..+++|+.|+-.+..++    ++.+--++|++||..-.++..+   .-
T Consensus        76 ------~~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~---~~  137 (361)
T KOG1430|consen   76 ------GA-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEP---II  137 (361)
T ss_pred             ------Cc-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCee---cc
Confidence                  45 777777654322    222356788999999987777776    4445569999999988777633   22


Q ss_pred             cccccccCCCc--ccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSL--MGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~--~~Y~asKaal~~l~~~  248 (249)
                      -.++..++|..  ..|+.||+--+.+++.
T Consensus       138 n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~  166 (361)
T KOG1430|consen  138 NGDESLPYPLKHIDPYGESKALAEKLVLE  166 (361)
T ss_pred             cCCCCCCCccccccccchHHHHHHHHHHH
Confidence            23344444533  5899999999988864

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.14  E-value=6.3e-10  Score=88.39  Aligned_cols=84  Identities=20%  Similarity=0.265  Sum_probs=70.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+ |+|.+++++|+++|++|++.+|++++.++....+..       ..++.++.+|++|.+++.++++.+.+.+
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-------~~~i~~~~~Dv~d~~sv~~~i~~~l~~~   73 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-------PESITPLPLDYHDDDALKLAIKSTIEKN   73 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-------CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            58999998 788889999999999999999998776655443321       1367888999999999999999998888


Q ss_pred             CCccEEEecccc
Q 025705          147 GPLHVLINNAGI  158 (249)
Q Consensus       147 g~id~linnag~  158 (249)
                      +++|++|+.+-.
T Consensus        74 g~id~lv~~vh~   85 (177)
T PRK08309         74 GPFDLAVAWIHS   85 (177)
T ss_pred             CCCeEEEEeccc
Confidence            999999987654

>PRK05865 hypothetical protein; Provisional

Probab=99.12  E-value=6.5e-10  Score=106.68  Aligned_cols=103  Identities=19%  Similarity=0.213  Sum_probs=81.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|.||.+++++|+++|++|++++|+....      . .        ..+.++.+|++|.+++.++++      
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-~--------~~v~~v~gDL~D~~~l~~al~------   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-P--------SSADFIAADIRDATAVESAMT------   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-c--------cCceEEEeeCCCHHHHHHHHh------
Confidence            589999999999999999999999999999975321      0 0        146788999999998887665      


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                       ++|++||+|+....             .+++|+.++.++.++    +.+.+.++||++||.
T Consensus        61 -~vD~VVHlAa~~~~-------------~~~vNv~GT~nLLeA----a~~~gvkr~V~iSS~  104 (854)
T PRK05865         61 -GADVVAHCAWVRGR-------------NDHINIDGTANVLKA----MAETGTGRIVFTSSG  104 (854)
T ss_pred             -CCCEEEECCCcccc-------------hHHHHHHHHHHHHHH----HHHcCCCeEEEECCc
Confidence             48999999985321             357899888777665    455555799999996

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.07  E-value=3.5e-09  Score=100.76  Aligned_cols=143  Identities=13%  Similarity=0.039  Sum_probs=95.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ..++|||||+|-||.+++++|.++|++|..                              ...|++|.+.+...+++.  
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------------~~~~l~d~~~v~~~i~~~--  427 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------------GKGRLEDRSSLLADIRNV--  427 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------------eccccccHHHHHHHHHhh--
Confidence            356999999999999999999999987631                              113677888887776653  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc-c-ccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE-D-MNV  222 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~-~-~~~  222 (249)
                         ++|++||+|+...... .+..+++-+..+++|+.++..+++++...    + .+++++||...+.+....+ . ..-
T Consensus       428 ---~pd~Vih~Aa~~~~~~-~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~~v~~~~~~~~~~~~~p  498 (668)
T PLN02260        428 ---KPTHVFNAAGVTGRPN-VDWCESHKVETIRANVVGTLTLADVCREN----G-LLMMNFATGCIFEYDAKHPEGSGIG  498 (668)
T ss_pred             ---CCCEEEECCcccCCCC-CChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-CeEEEEcccceecCCcccccccCCC
Confidence               6899999999754211 22234556788999999999999997543    2 3566776644332110000 0 000


Q ss_pred             cccc-ccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGR-RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~-~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +.+. .+.+....|+.||.+.+.+++.
T Consensus       499 ~~E~~~~~~~~~~Yg~sK~~~E~~~~~  525 (668)
T PLN02260        499 FKEEDKPNFTGSFYSKTKAMVEELLRE  525 (668)
T ss_pred             CCcCCCCCCCCChhhHHHHHHHHHHHh
Confidence            1221 2224457899999999998864

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.05  E-value=5.1e-09  Score=88.86  Aligned_cols=159  Identities=19%  Similarity=0.150  Sum_probs=119.2

Q ss_pred             CCEEEEeCC-CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGS-TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGa-s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .++|||.|. ..-|++.+|..|-++|+-|+++..+.++.+...++-         ..++.....|..++.++...++++.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---------~~dI~~L~ld~~~~~~~~~~l~~f~   73 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---------RPDIRPLWLDDSDPSSIHASLSRFA   73 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---------CCCCCCcccCCCCCcchHHHHHHHH
Confidence            468999995 799999999999999999999999876655443332         1357777788877777777666666


Q ss_pred             ccCC--------------CccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC--CCCeEEEE-
Q 025705          144 GRLG--------------PLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG--SPSRIINV-  205 (249)
Q Consensus       144 ~~~g--------------~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~--~~g~Iv~v-  205 (249)
                      +...              .+..+|...... ..++++.++.+.|...++.|+..++.++|.++|++..+  ++.+||.+ 
T Consensus        74 ~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~  153 (299)
T PF08643_consen   74 SLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFN  153 (299)
T ss_pred             HHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEe
Confidence            5432              244555555433 36788999999999999999999999999999999982  34455554 


Q ss_pred             cCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhh
Q 025705          206 NSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       206 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      -|+..-...               |..+.-.....++.+|++
T Consensus       154 Psi~ssl~~---------------PfhspE~~~~~al~~~~~  180 (299)
T PF08643_consen  154 PSISSSLNP---------------PFHSPESIVSSALSSFFT  180 (299)
T ss_pred             CchhhccCC---------------CccCHHHHHHHHHHHHHH
Confidence            466666665               777777888888887764

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.02  E-value=1.1e-08  Score=88.54  Aligned_cols=168  Identities=21%  Similarity=0.196  Sum_probs=106.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhc-----CCCCCCceEEEEccCCCHHH--HHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWS-----GKGLPLNIEAMELDLLSLDS--VVR  137 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~D~~~~~~--v~~  137 (249)
                      +++++|||+|.+|+.+..+|+.+- ++|++..|-.. .+...+++.+...     +.....++..+..|++.++-  -+.
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s-~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQS-DEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCC-HHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            479999999999999999998764 59999877433 1222333333222     11223689999999994321  122


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      -.+++.   ..+|.+|||++....       ...+.+....|+.|+..+.+.+.-    .+...+.+|||++..-.....
T Consensus        80 ~~~~La---~~vD~I~H~gA~Vn~-------v~pYs~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~~~~~~  145 (382)
T COG3320          80 TWQELA---ENVDLIIHNAALVNH-------VFPYSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGETEYYS  145 (382)
T ss_pred             HHHHHh---hhcceEEecchhhcc-------cCcHHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeeccccccC
Confidence            223322   269999999986531       123567778999999988887632    233469999998765543221


Q ss_pred             c---ccccccc--cccCCCcccchhhHHHHHhhhhc
Q 025705          218 E---DMNVVSG--RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~---~~~~~~~--~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .   +.+..++  .........|+-||.+.+.++|+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~  181 (382)
T COG3320         146 NFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVRE  181 (382)
T ss_pred             CCccccccccccccccCccCCCcchhHHHHHHHHHH
Confidence            1   1111011  13335557899999999999874

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.98  E-value=2.7e-09  Score=88.66  Aligned_cols=165  Identities=17%  Similarity=0.063  Sum_probs=114.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|++||||-+|-=|.-+|+.|+++|+.|.-+.|+........-++.+. +. ....+++.+.+|++|...+.++++++  
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~-~~-~~~~~l~l~~gDLtD~~~l~r~l~~v--   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYED-PH-LNDPRLHLHYGDLTDSSNLLRILEEV--   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccc-cc-cCCceeEEEeccccchHHHHHHHHhc--
Confidence            589999999999999999999999999998887632211110011110 11 11246889999999999999999987  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         ++|-+.|-|+.+.    ...+-++-+.+.+++.+|+..+..++--+-  .+..++..-||.. .+|.....+   .+
T Consensus        78 ---~PdEIYNLaAQS~----V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE-~fG~v~~~p---q~  144 (345)
T COG1089          78 ---QPDEIYNLAAQSH----VGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSE-LYGLVQEIP---QK  144 (345)
T ss_pred             ---Cchhheecccccc----ccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHH-hhcCcccCc---cc
Confidence               7999999988754    334556667888999999999998864432  2234666655543 333211111   23


Q ss_pred             ccccCCCcccchhhHHHHHhhh
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~  246 (249)
                      +.+++.+.++|+++|....-++
T Consensus       145 E~TPFyPrSPYAvAKlYa~W~t  166 (345)
T COG1089         145 ETTPFYPRSPYAVAKLYAYWIT  166 (345)
T ss_pred             cCCCCCCCCHHHHHHHHHHhee
Confidence            5577788999999998765443

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.94  E-value=1.8e-08  Score=93.81  Aligned_cols=133  Identities=12%  Similarity=0.188  Sum_probs=88.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEEcChHH--HHHHH-HHH---------HHhhcCC---CCCCceEE
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA---HVVMAVRNLKA--ANELI-QKW---------QEEWSGK---GLPLNIEA  124 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~---~Vil~~r~~~~--~~~~~-~~~---------~~~~~~~---~~~~~v~~  124 (249)
                      ++|++|+||||+|.||+.++++|++.+.   +|+++.|....  .++.. +++         ++..+..   ....++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4689999999999999999999998763   67888885432  22221 121         1111110   01247999


Q ss_pred             EEccCCCHH-----HHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC
Q 025705          125 MELDLLSLD-----SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP  199 (249)
Q Consensus       125 ~~~D~~~~~-----~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~  199 (249)
                      +.+|+++++     +..+   .+.+   .+|++||+|+....       .+..+..+++|+.++..+.+.+...   .+.
T Consensus       197 v~GDl~d~~LGLs~~~~~---~L~~---~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~---~~l  260 (605)
T PLN02503        197 VVGNVCESNLGLEPDLAD---EIAK---EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC---KKL  260 (605)
T ss_pred             EEeeCCCcccCCCHHHHH---HHHh---cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc---CCC
Confidence            999999872     2222   2221   58999999997531       1346778999999999999886442   122


Q ss_pred             CeEEEEcCCccc
Q 025705          200 SRIINVNSVMHY  211 (249)
Q Consensus       200 g~Iv~vsS~~~~  211 (249)
                      .++|++||...+
T Consensus       261 k~fV~vSTayVy  272 (605)
T PLN02503        261 KLFLQVSTAYVN  272 (605)
T ss_pred             CeEEEccCceee
Confidence            479999986544

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.93  E-value=6.6e-09  Score=86.31  Aligned_cols=160  Identities=15%  Similarity=0.155  Sum_probs=113.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ....+++++||||+|.||.++|.+|..+|+.|+++|.-...-++....+...       ..+..+.-|+..+     ++.
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~-------~~fel~~hdv~~p-----l~~   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGH-------PNFELIRHDVVEP-----LLK   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccC-------cceeEEEeechhH-----HHH
Confidence            3456789999999999999999999999999999987655544444333331       2455555566544     333


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                             .+|.++|-|...++-.+..-+    -+++..|..++.+....+...     ..+++..|++..+......+..
T Consensus        91 -------evD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~  154 (350)
T KOG1429|consen   91 -------EVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQV  154 (350)
T ss_pred             -------HhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCc
Confidence                   478888988876654443333    356788999998888776433     3588888887766665555555


Q ss_pred             ccccc-cccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSG-RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~-~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+.+ -++..+.+.|...|-+.+.|+..
T Consensus       155 e~ywg~vnpigpr~cydegKr~aE~L~~~  183 (350)
T KOG1429|consen  155 ETYWGNVNPIGPRSCYDEGKRVAETLCYA  183 (350)
T ss_pred             cccccccCcCCchhhhhHHHHHHHHHHHH
Confidence            55555 47778899999999999988753

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.92  E-value=5.6e-09  Score=92.86  Aligned_cols=82  Identities=20%  Similarity=0.265  Sum_probs=63.4

Q ss_pred             CCCCCEEEEeCC---------------CCc-hHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEE
Q 025705           62 PVNDLTCIVTGS---------------TSG-IGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM  125 (249)
Q Consensus        62 ~~~~~~vlItGa---------------s~g-IG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~  125 (249)
                      +++||+++||||               |+| +|+++|++|+++|++|++++++.+ ++       .  +     .  ...
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~--~-----~--~~~  247 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T--P-----A--GVK  247 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C--C-----C--CcE
Confidence            578999999999               455 999999999999999999998752 11       0  0     1  134


Q ss_pred             EccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCC
Q 025705          126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGE  163 (249)
Q Consensus       126 ~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~  163 (249)
                      .+|+++.+++.+.+++   .++++|++|||||+....+
T Consensus       248 ~~dv~~~~~~~~~v~~---~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        248 RIDVESAQEMLDAVLA---ALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             EEccCCHHHHHHHHHH---hcCCCCEEEEccccccccc
Confidence            5799998888777663   4678999999999865443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.88  E-value=2.8e-08  Score=84.52  Aligned_cols=98  Identities=18%  Similarity=0.158  Sum_probs=66.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      +|||||+|.||.++++.|+++|++|++++|+++......              ...  ..|+.. +..       .+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------~~~--~~~~~~-~~~-------~~~~~   56 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------------WEG--YKPWAP-LAE-------SEALE   56 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------------cee--eecccc-cch-------hhhcC
Confidence            589999999999999999999999999999876532110              001  112221 111       12234


Q ss_pred             CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhc
Q 025705          148 PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLF  191 (249)
Q Consensus       148 ~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l  191 (249)
                      ++|++||+||.....  .+.+.+..+..+++|+.++..+.+++.
T Consensus        57 ~~D~Vvh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~   98 (292)
T TIGR01777        57 GADAVINLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIA   98 (292)
T ss_pred             CCCEEEECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence            799999999964321  123445566788899999888888764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.84  E-value=1.4e-08  Score=86.56  Aligned_cols=106  Identities=17%  Similarity=0.138  Sum_probs=76.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      ++||||+|.+|.+++++|+++|++|.++.|++++..       .        ..+..+.+|+.|++++.++++.. +...
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~--------~~~~~~~~d~~d~~~l~~a~~~~-~~~~   65 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------G--------PNEKHVKFDWLDEDTWDNPFSSD-DGME   65 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------C--------CCCccccccCCCHHHHHHHHhcc-cCcC
Confidence            799999999999999999999999999999976431       0        13455678999999999888653 2233


Q ss_pred             C-ccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcc
Q 025705          148 P-LHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMH  210 (249)
Q Consensus       148 ~-id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~  210 (249)
                      + +|.++++++...         +..+            ..+.++..+++.+-.+||++||...
T Consensus        66 g~~d~v~~~~~~~~---------~~~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~  108 (285)
T TIGR03649        66 PEISAVYLVAPPIP---------DLAP------------PMIKFIDFARSKGVRRFVLLSASII  108 (285)
T ss_pred             CceeEEEEeCCCCC---------ChhH------------HHHHHHHHHHHcCCCEEEEeecccc
Confidence            4 999999876321         0111            1123344455666679999998644

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.83  E-value=1.8e-08  Score=96.75  Aligned_cols=164  Identities=16%  Similarity=0.209  Sum_probs=132.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|..+|+||-||.|.++|..|..+|+ .+++++|+.-+..-.. .+...+...+  .+|.+-..|++..+..+.++++.
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa-~~vrrWr~~G--VqV~vsT~nitt~~ga~~Li~~s 1843 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQA-LMVRRWRRRG--VQVQVSTSNITTAEGARGLIEES 1843 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHH-HHHHHHHhcC--eEEEEecccchhhhhHHHHHHHh
Confidence            458899999999999999999999999 6888999865543332 2333344333  57777778999999999988886


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+ .+++..++|-|.+...+-+++.+++.++..-+..+.++.++-+.-.....+-  -.+|..||+..-.|.        
T Consensus      1844 ~k-l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L--dyFv~FSSvscGRGN-------- 1912 (2376)
T KOG1202|consen 1844 NK-LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL--DYFVVFSSVSCGRGN-------- 1912 (2376)
T ss_pred             hh-cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc--ceEEEEEeecccCCC--------
Confidence            54 5889999999999988899999999999999999999998776655554433  378888998777777        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             .++..|+-+.++++.+..+
T Consensus      1913 -------~GQtNYG~aNS~MERiceq 1931 (2376)
T KOG1202|consen 1913 -------AGQTNYGLANSAMERICEQ 1931 (2376)
T ss_pred             -------CcccccchhhHHHHHHHHH
Confidence                   8999999999999987654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.82  E-value=1.6e-07  Score=96.29  Aligned_cols=168  Identities=17%  Similarity=0.091  Sum_probs=102.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC----CEEEEEEcChHHHHHHHHHHHHhhcC-----CCCCCceEEEEccCCCHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESG----AHVVMAVRNLKAANELIQKWQEEWSG-----KGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G----~~Vil~~r~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .++++||||+|.||.+++++|++++    .+|++..|+...... .+++.+....     .....++.++.+|++++.--
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5789999999999999999999987    789988887543222 2222221110     00113688899999864210


Q ss_pred             --HHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          136 --VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       136 --~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                        ....+++.   ..+|++||||+.....       ..+......|+.|+..+.+.+..    .+..+++++||.+.+..
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~~-------~~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~~~ 1115 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHWV-------YPYSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSALDT 1115 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecCc-------cCHHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeecCc
Confidence              11122222   3689999999965311       12344556799999999887643    33458999999866532


Q ss_pred             CCC-----------ccccccccc--cccCCCcccchhhHHHHHhhhh
Q 025705          214 FVD-----------TEDMNVVSG--RRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       214 ~~~-----------~~~~~~~~~--~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..-           ...+.....  .........|+.||.+.+.+++
T Consensus      1116 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~ 1162 (1389)
T TIGR03443      1116 EYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIR 1162 (1389)
T ss_pred             ccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHH
Confidence            100           000000000  0111233569999999988875

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.81  E-value=1.8e-07  Score=71.72  Aligned_cols=151  Identities=13%  Similarity=0.076  Sum_probs=105.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ...|+|-||-+.+|.+++..|-.+++-|.-+|-.+.+-  .              ..-..+..|-+-.|+-+.+++++-+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~--A--------------d~sI~V~~~~swtEQe~~v~~~vg~   66 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ--A--------------DSSILVDGNKSWTEQEQSVLEQVGS   66 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc--c--------------cceEEecCCcchhHHHHHHHHHHHH
Confidence            46799999999999999999999999998888664321  0              1224455666666777777777766


Q ss_pred             cCC--CccEEEeccccCCCCCCCCCC-HHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          145 RLG--PLHVLINNAGIFSIGEPQKFS-KDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       145 ~~g--~id~linnag~~~~~~~~~~~-~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      ..+  ++|.+++.||....+....-+ ....+-++.-.+.....-.+.+-.+++..  |.+-..+.-++..++       
T Consensus        67 sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G--GLL~LtGAkaAl~gT-------  137 (236)
T KOG4022|consen   67 SLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG--GLLQLTGAKAALGGT-------  137 (236)
T ss_pred             hhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC--ceeeecccccccCCC-------
Confidence            443  599999999977655443211 12334445555555555556666666553  455556666677777       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              |++-.|+++|+|+.+|++.
T Consensus       138 --------PgMIGYGMAKaAVHqLt~S  156 (236)
T KOG4022|consen  138 --------PGMIGYGMAKAAVHQLTSS  156 (236)
T ss_pred             --------CcccchhHHHHHHHHHHHH
Confidence                    9999999999999999874

>PRK12320 hypothetical protein; Provisional

Probab=98.80  E-value=4.9e-08  Score=92.15  Aligned_cols=103  Identities=19%  Similarity=0.208  Sum_probs=76.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|.||.+++++|.++|++|++++|+....       .        ...+.++.+|+++.. +.+++       
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------~--------~~~ve~v~~Dl~d~~-l~~al-------   58 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------L--------DPRVDYVCASLRNPV-LQELA-------   58 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------c--------cCCceEEEccCCCHH-HHHHh-------
Confidence            589999999999999999999999999999874321       0        025678899999874 33322       


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                      .++|++||+|+....      .      ..++|+.++.++.+++.    +.+ .++|++||..
T Consensus        59 ~~~D~VIHLAa~~~~------~------~~~vNv~Gt~nLleAA~----~~G-vRiV~~SS~~  104 (699)
T PRK12320         59 GEADAVIHLAPVDTS------A------PGGVGITGLAHVANAAA----RAG-ARLLFVSQAA  104 (699)
T ss_pred             cCCCEEEEcCccCcc------c------hhhHHHHHHHHHHHHHH----HcC-CeEEEEECCC
Confidence            258999999986311      0      12478888888888763    333 3799999874

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.78  E-value=5.1e-08  Score=83.48  Aligned_cols=84  Identities=19%  Similarity=0.138  Sum_probs=64.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcCh---HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNL---KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ++++|+++|+|| ||+|++++..|++.|++ |++++|+.   +++++..+++.+..      ..+.+..+|+++.+++.+
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~------~~~~~~~~d~~~~~~~~~  195 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV------PECIVNVYDLNDTEKLKA  195 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC------CCceeEEechhhhhHHHh
Confidence            467899999999 69999999999999995 99999997   66777666664421      234556688887776655


Q ss_pred             HHHHHhccCCCccEEEeccccC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~  159 (249)
                      .++       ..|+||||....
T Consensus       196 ~~~-------~~DilINaTp~G  210 (289)
T PRK12548        196 EIA-------SSDILVNATLVG  210 (289)
T ss_pred             hhc-------cCCEEEEeCCCC
Confidence            433       469999998654

>PLN00016 RNA-binding protein; Provisional

Probab=98.77  E-value=1.2e-07  Score=84.23  Aligned_cols=109  Identities=15%  Similarity=0.131  Sum_probs=72.3

Q ss_pred             CCCEEEEe----CCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHH-------HHHHHhhcCCCCCCceEEEEccCCCH
Q 025705           64 NDLTCIVT----GSTSGIGREIARQLAESGAHVVMAVRNLKAANELI-------QKWQEEWSGKGLPLNIEAMELDLLSL  132 (249)
Q Consensus        64 ~~~~vlIt----Gas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~D~~~~  132 (249)
                      ..+.|+||    ||+|.||.+++++|+++|++|++++|+........       .++..        ..+.++.+|+.| 
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--------~~v~~v~~D~~d-  121 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--------AGVKTVWGDPAD-  121 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--------cCceEEEecHHH-
Confidence            34789999    99999999999999999999999999875432211       11111        136788888876 


Q ss_pred             HHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc
Q 025705          133 DSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV  212 (249)
Q Consensus       133 ~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~  212 (249)
                        +.+++.     ..++|++|+++|..         .+           +    ++.++..+++.+-.++|++||...+.
T Consensus       122 --~~~~~~-----~~~~d~Vi~~~~~~---------~~-----------~----~~~ll~aa~~~gvkr~V~~SS~~vyg  170 (378)
T PLN00016        122 --VKSKVA-----GAGFDVVYDNNGKD---------LD-----------E----VEPVADWAKSPGLKQFLFCSSAGVYK  170 (378)
T ss_pred             --HHhhhc-----cCCccEEEeCCCCC---------HH-----------H----HHHHHHHHHHcCCCEEEEEccHhhcC
Confidence              333321     13689999987631         11           1    22333444555556899999986543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.71  E-value=4.6e-08  Score=80.95  Aligned_cols=100  Identities=15%  Similarity=0.186  Sum_probs=67.3

Q ss_pred             CEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSG-IGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~g-IG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+-.||+.|+| ||.++|++|+++|++|++++|+....        . ..    ...+.++.+  .+.++.   .+.+.+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~-~~----~~~v~~i~v--~s~~~m---~~~l~~   77 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------P-EP----HPNLSIIEI--ENVDDL---LETLEP   77 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------C-CC----CCCeEEEEE--ecHHHH---HHHHHH
Confidence            36678876665 99999999999999999998764210        0 00    013445443  222322   233333


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHH
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP  183 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~  183 (249)
                      .++++|++|||||+....+....+.+++.+++++|.+..
T Consensus        78 ~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         78 LVKDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             HhcCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            345799999999997656666678888999988887653

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.70  E-value=5.8e-08  Score=86.12  Aligned_cols=83  Identities=12%  Similarity=0.198  Sum_probs=63.4

Q ss_pred             CCCCCEEEEeCC---------------CCc-hHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEE
Q 025705           62 PVNDLTCIVTGS---------------TSG-IGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM  125 (249)
Q Consensus        62 ~~~~~~vlItGa---------------s~g-IG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~  125 (249)
                      +++||+++||||               |+| +|.++|++|..+|++|++++++....          .+     ..  ..
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~-----~~--~~  244 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TP-----PG--VK  244 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CC-----CC--cE
Confidence            478999999999               667 99999999999999999988764321          00     11  24


Q ss_pred             EccCCCHHHH-HHHHHHHhccCCCccEEEeccccCCCCCC
Q 025705          126 ELDLLSLDSV-VRFSEAWNGRLGPLHVLINNAGIFSIGEP  164 (249)
Q Consensus       126 ~~D~~~~~~v-~~~~~~~~~~~g~id~linnag~~~~~~~  164 (249)
                      .+|+++.+++ ++++++.   ++.+|++|+|||+....+.
T Consensus       245 ~~~v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       245 SIKVSTAEEMLEAALNEL---AKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             EEEeccHHHHHHHHHHhh---cccCCEEEEcccccccccc
Confidence            5799999888 5555443   4679999999999765443

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.70  E-value=2.6e-07  Score=74.49  Aligned_cols=84  Identities=19%  Similarity=0.213  Sum_probs=66.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++|.||+|++|+.+++.|+++|++|++++|+.+++++..+++.+..       ......+|..+.+++.+.++ 
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~-   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-------GEGVGAVETSDDAARAAAIK-   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-------CCcEEEeeCCCHHHHHHHHh-
Confidence            5778999999999999999999999999999999999988888777765421       23345678888887766553 


Q ss_pred             HhccCCCccEEEeccccC
Q 025705          142 WNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       142 ~~~~~g~id~linnag~~  159 (249)
                            +.|++|++....
T Consensus        97 ------~~diVi~at~~g  108 (194)
T cd01078          97 ------GADVVFAAGAAG  108 (194)
T ss_pred             ------cCCEEEECCCCC
Confidence                  578888876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.66  E-value=8.7e-08  Score=79.73  Aligned_cols=161  Identities=18%  Similarity=0.114  Sum_probs=108.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAES--GAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.++||||++-||...+..++..  .++.+.++.=. -......+++.       ...+..+++.|+.+...+..++.. 
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-------n~p~ykfv~~di~~~~~~~~~~~~-   78 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-------NSPNYKFVEGDIADADLVLYLFET-   78 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-------cCCCceEeeccccchHHHHhhhcc-
Confidence            88999999999999999999986  45555544210 00011112211       125788999999999988777664 


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                          .++|.++|-|+..+-..    +--+--+.++.|++++..+...+.-..   +--++|+||+-..+...-. +..  
T Consensus        79 ----~~id~vihfaa~t~vd~----s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~-~~~--  144 (331)
T KOG0747|consen   79 ----EEIDTVIHFAAQTHVDR----SFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDE-DAV--  144 (331)
T ss_pred             ----CchhhhhhhHhhhhhhh----hcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccc-ccc--
Confidence                48999999998754211    111223557789999999988875543   3358999999876665421 111  


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .++.....+...|++||+|.++++++
T Consensus       145 ~~E~s~~nPtnpyAasKaAaE~~v~S  170 (331)
T KOG0747|consen  145 VGEASLLNPTNPYAASKAAAEMLVRS  170 (331)
T ss_pred             ccccccCCCCCchHHHHHHHHHHHHH
Confidence            11334446777899999999999875

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.60  E-value=1.4e-05  Score=73.08  Aligned_cols=170  Identities=17%  Similarity=0.078  Sum_probs=112.8

Q ss_pred             CCCCCCCCCEEEEeCCC-CchHHHHHHHHHHcCCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           58 LPLPPVNDLTCIVTGST-SGIGREIARQLAESGAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas-~gIG~~ia~~l~~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .......++++|||||+ +.||.+++.+|+..|+.||++..+..+ -.+..+.+=..+..  .+..+.++.++..+..++
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~--~ga~LwvVpaN~~SysDV  466 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHAR--YGAALWVVPANMGSYSDV  466 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCC--CCceEEEEeccccchhhH
Confidence            44456889999999988 789999999999999999997655432 22222233222222  235788888999999999


Q ss_pred             HHHHHHHhccCC--------------CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC---
Q 025705          136 VRFSEAWNGRLG--------------PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS---  198 (249)
Q Consensus       136 ~~~~~~~~~~~g--------------~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---  198 (249)
                      +.+++.+-+..-              .+|.+|--|.....+.+.+... .-+-.+++-+.+...++-.+.++-.+++   
T Consensus       467 dAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~ags-raE~~~rilLw~V~Rliggl~~~~s~r~v~~  545 (866)
T COG4982         467 DALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGS-RAEFAMRILLWNVLRLIGGLKKQGSSRGVDT  545 (866)
T ss_pred             HHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCc-hHHHHHHHHHHHHHHHHHHhhhhccccCccc
Confidence            999998875321              2678888887766566555543 2234455666666666666555433332   


Q ss_pred             CCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhh
Q 025705          199 PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       199 ~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~  246 (249)
                      +-++|.-.|--  .|+              +.+-..|+-||++++.++
T Consensus       546 R~hVVLPgSPN--rG~--------------FGgDGaYgEsK~aldav~  577 (866)
T COG4982         546 RLHVVLPGSPN--RGM--------------FGGDGAYGESKLALDAVV  577 (866)
T ss_pred             ceEEEecCCCC--CCc--------------cCCCcchhhHHHHHHHHH
Confidence            23555555531  222              256778999999999875

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.43  E-value=1.7e-06  Score=77.62  Aligned_cols=136  Identities=14%  Similarity=0.172  Sum_probs=91.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--C-EEEEEEcChH-----------HHHHHHHHHHHhhcCCCCCCceEEEEcc
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESG--A-HVVMAVRNLK-----------AANELIQKWQEEWSGKGLPLNIEAMELD  128 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G--~-~Vil~~r~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~~~D  128 (249)
                      ++||+++||||+|.+|+-+.++|++.-  . ++++.-|...           ..+.+.+++++..+.  .-.++..+.+|
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~--~l~Kv~pi~GD   87 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPE--ALEKVVPIAGD   87 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcc--ceecceecccc
Confidence            578999999999999999999999864  2 5777766321           122333344444333  22588888999


Q ss_pred             CCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       129 ~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                      +++++---+--+.. .....+|++||+|+...+       .|.++..+.+|..|+..+.+.+.....-   -..+.+|..
T Consensus        88 i~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~~vhVSTA  156 (467)
T KOG1221|consen   88 ISEPDLGISESDLR-TLADEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKL---KALVHVSTA  156 (467)
T ss_pred             ccCcccCCChHHHH-HHHhcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhh---heEEEeehh
Confidence            98754321111111 112379999999997532       2567888999999999999987654322   378888876


Q ss_pred             ccc
Q 025705          209 MHY  211 (249)
Q Consensus       209 ~~~  211 (249)
                      ...
T Consensus       157 y~n  159 (467)
T KOG1221|consen  157 YSN  159 (467)
T ss_pred             hee
Confidence            554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.36  E-value=5e-06  Score=69.30  Aligned_cols=124  Identities=19%  Similarity=0.223  Sum_probs=75.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      ++||||+|-||++++.+|.+.|+.|+++.|++.+.+....            ..+.       ..+.+    ++..+  .
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------------~~v~-------~~~~~----~~~~~--~   55 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------------PNVT-------LWEGL----ADALT--L   55 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------------cccc-------ccchh----hhccc--C
Confidence            5899999999999999999999999999999765432210            0111       11122    22211  1


Q ss_pred             CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCcccccc
Q 025705          148 PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       148 ~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      ++|++||-||..-...  .-+.+.=+++++.-+.    .++.+.....+. .+-++..-+|..|++|......+++
T Consensus        56 ~~DavINLAG~~I~~r--rWt~~~K~~i~~SRi~----~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE  125 (297)
T COG1090          56 GIDAVINLAGEPIAER--RWTEKQKEEIRQSRIN----TTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTE  125 (297)
T ss_pred             CCCEEEECCCCccccc--cCCHHHHHHHHHHHhH----HHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeec
Confidence            7999999999754332  1245555555544444    444444444422 2334555567888888754443333

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.34  E-value=2.7e-06  Score=75.00  Aligned_cols=77  Identities=26%  Similarity=0.491  Sum_probs=65.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +.++|.|+ |++|..+|+.|+++| .+|.+.+|+.+++.+..+....         ++...++|+.|.+.+.+++++   
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~---------~v~~~~vD~~d~~al~~li~~---   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG---------KVEALQVDAADVDALVALIKD---   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc---------cceeEEecccChHHHHHHHhc---
Confidence            46889999 999999999999999 7999999998887777554322         788999999999998888774   


Q ss_pred             cCCCccEEEeccccC
Q 025705          145 RLGPLHVLINNAGIF  159 (249)
Q Consensus       145 ~~g~id~linnag~~  159 (249)
                          .|++||++...
T Consensus        69 ----~d~VIn~~p~~   79 (389)
T COG1748          69 ----FDLVINAAPPF   79 (389)
T ss_pred             ----CCEEEEeCCch
Confidence                39999998753

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.31  E-value=1.5e-05  Score=65.88  Aligned_cols=75  Identities=27%  Similarity=0.317  Sum_probs=58.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      ++|+||+|.+|+.+++.|++.|++|.++.|+..+  +..+++..        ..+.++.+|+.|.+++.++++       
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~--------~g~~vv~~d~~~~~~l~~al~-------   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQA--------LGAEVVEADYDDPESLVAALK-------   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHH--------TTTEEEES-TT-HHHHHHHHT-------
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhc--------ccceEeecccCCHHHHHHHHc-------
Confidence            6899999999999999999999999999999732  23344444        135677999999998877766       


Q ss_pred             CccEEEeccccC
Q 025705          148 PLHVLINNAGIF  159 (249)
Q Consensus       148 ~id~linnag~~  159 (249)
                      ++|.++++.+..
T Consensus        64 g~d~v~~~~~~~   75 (233)
T PF05368_consen   64 GVDAVFSVTPPS   75 (233)
T ss_dssp             TCSEEEEESSCS
T ss_pred             CCceEEeecCcc
Confidence            789999887754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.30  E-value=5.1e-06  Score=63.06  Aligned_cols=79  Identities=25%  Similarity=0.349  Sum_probs=59.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++++++|.|+ ||.|++++..|++.|++ |.++.|+.+++++..+++..        ..+.++.  +.+..   +.+
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~--------~~~~~~~--~~~~~---~~~   73 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG--------VNIEAIP--LEDLE---EAL   73 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG--------CSEEEEE--GGGHC---HHH
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc--------cccceee--HHHHH---HHH
Confidence            4688999999998 89999999999999995 99999999999888877722        2344443  33322   222


Q ss_pred             HHHhccCCCccEEEeccccCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~  160 (249)
                             ...|++||+.+...
T Consensus        74 -------~~~DivI~aT~~~~   87 (135)
T PF01488_consen   74 -------QEADIVINATPSGM   87 (135)
T ss_dssp             -------HTESEEEE-SSTTS
T ss_pred             -------hhCCeEEEecCCCC
Confidence                   26899999988653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.30  E-value=1.8e-05  Score=66.52  Aligned_cols=129  Identities=22%  Similarity=0.165  Sum_probs=88.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .++||||+|.+|.+++++|.++|++|.+..|+++.+....             ..+.+...|+.+++.+...++      
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------------~~v~~~~~d~~~~~~l~~a~~------   62 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------------GGVEVVLGDLRDPKSLVAGAK------   62 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------------CCcEEEEeccCCHhHHHHHhc------
Confidence            5899999999999999999999999999999988876553             257888999999998877665      


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|.+++..+... ...         ..............+...     .+..+++.+|+..+..              
T Consensus        63 -G~~~~~~i~~~~~-~~~---------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--------------  112 (275)
T COG0702          63 -GVDGVLLISGLLD-GSD---------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--------------  112 (275)
T ss_pred             -cccEEEEEecccc-ccc---------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--------------
Confidence             6788888777543 211         011222233333444332     1223677777765432              


Q ss_pred             ccCCCcccchhhHHHHHhhhh
Q 025705          227 RKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~  247 (249)
                         .....|..+|...+...+
T Consensus       113 ---~~~~~~~~~~~~~e~~l~  130 (275)
T COG0702         113 ---ASPSALARAKAAVEAALR  130 (275)
T ss_pred             ---CCccHHHHHHHHHHHHHH
Confidence               234567777777766543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.22  E-value=6.8e-06  Score=74.69  Aligned_cols=77  Identities=19%  Similarity=0.273  Sum_probs=58.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|.++|+|+++ +|.++|+.|+++|++|.+++++. +.+++..+++.+        ..+.++..|..+.        
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~--------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE--------LGIELVLGEYPEE--------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh--------cCCEEEeCCcchh--------
Confidence            46789999999887 99999999999999999999985 344444444433        1345667777651        


Q ss_pred             HHhccCCCccEEEeccccC
Q 025705          141 AWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~  159 (249)
                          ..+++|++|+++|..
T Consensus        65 ----~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 ----FLEGVDLVVVSPGVP   79 (450)
T ss_pred             ----HhhcCCEEEECCCCC
Confidence                124789999999974

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.22  E-value=1.3e-05  Score=70.93  Aligned_cols=137  Identities=18%  Similarity=0.128  Sum_probs=84.7

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .+....+-..|+|+||+|++|+-+++.|.++|+.|.++-|+.++.++... +..      .......+..|.....+...
T Consensus        72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~------~d~~~~~v~~~~~~~~d~~~  144 (411)
T KOG1203|consen   72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFF------VDLGLQNVEADVVTAIDILK  144 (411)
T ss_pred             CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccc------cccccceeeeccccccchhh
Confidence            33445566889999999999999999999999999999999888776654 100      00223344455544443333


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      .+.+...  -...+++-++|.-...  +     +..--..+.+.|+.++++++..    .+-.++|++||+.+....
T Consensus       145 ~~~~~~~--~~~~~v~~~~ggrp~~--e-----d~~~p~~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~  208 (411)
T KOG1203|consen  145 KLVEAVP--KGVVIVIKGAGGRPEE--E-----DIVTPEKVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFN  208 (411)
T ss_pred             hhhhhcc--ccceeEEecccCCCCc--c-----cCCCcceecHHHHHHHHHHHHH----hCCceEEEEEeecCcccC
Confidence            2222211  1356677776643211  1     1122235667777777777733    334589999998765443

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.21  E-value=8e-06  Score=66.98  Aligned_cols=161  Identities=16%  Similarity=0.078  Sum_probs=106.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhc--CCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWS--GKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++||||-+|-=|.-+|+.|+.+|+.|--+.|+......  .++...+.  ....+.....+..|++|...+.++++.+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT--~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT--ARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch--hhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            4799999999999999999999999999887775444322  12333222  2223357788889999999999999887


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                           .++-+.|-|+.++..-    +-+--+-+-++...|++.+..++-..-+..+  .=.+-.|.+-++|-....+   
T Consensus       106 -----kPtEiYnLaAQSHVkv----SFdlpeYTAeVdavGtLRlLdAi~~c~l~~~--VrfYQAstSElyGkv~e~P---  171 (376)
T KOG1372|consen  106 -----KPTEVYNLAAQSHVKV----SFDLPEYTAEVDAVGTLRLLDAIRACRLTEK--VRFYQASTSELYGKVQEIP---  171 (376)
T ss_pred             -----CchhhhhhhhhcceEE----EeecccceeeccchhhhhHHHHHHhcCcccc--eeEEecccHhhcccccCCC---
Confidence                 5788888888654321    1122233446778889888888765544432  2233344444444211111   


Q ss_pred             ccccccCCCcccchhhHHH
Q 025705          223 VSGRRKYTSLMGYSGSKLA  241 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaa  241 (249)
                      .++..++.+.++|+++|.+
T Consensus       172 QsE~TPFyPRSPYa~aKmy  190 (376)
T KOG1372|consen  172 QSETTPFYPRSPYAAAKMY  190 (376)
T ss_pred             cccCCCCCCCChhHHhhhh
Confidence            2345677888999999975

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.20  E-value=6.4e-06  Score=73.43  Aligned_cols=76  Identities=34%  Similarity=0.464  Sum_probs=58.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           68 CIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.+++++..+++..        .++....+|+.|.++++++++     
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~--------~~~~~~~~d~~~~~~l~~~~~-----   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLG--------DRVEAVQVDVNDPESLAELLR-----   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TT--------TTEEEEE--TTTHHHHHHHHT-----
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccc--------cceeEEEEecCCHHHHHHHHh-----
Confidence            689999 9999999999999874  899999999998888766522        489999999999999887766     


Q ss_pred             CCCccEEEeccccC
Q 025705          146 LGPLHVLINNAGIF  159 (249)
Q Consensus       146 ~g~id~linnag~~  159 (249)
                        +-|++||++|..
T Consensus        67 --~~dvVin~~gp~   78 (386)
T PF03435_consen   67 --GCDVVINCAGPF   78 (386)
T ss_dssp             --TSSEEEE-SSGG
T ss_pred             --cCCEEEECCccc
Confidence              359999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.16  E-value=1e-05  Score=69.57  Aligned_cols=83  Identities=20%  Similarity=0.284  Sum_probs=71.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAE----SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~----~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      -++|-||||--|.-+++++.+    .|..+.+.+||+++++++.+++.+..+.. ....+ ++.||.+|++++.+++++ 
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~-ls~~~-i~i~D~~n~~Sl~emak~-   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTD-LSSSV-ILIADSANEASLDEMAKQ-   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCC-cccce-EEEecCCCHHHHHHHHhh-
Confidence            489999999999999999999    78899999999999999999988865332 22344 788999999999998875 


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                            -.++|||+|-
T Consensus        84 ------~~vivN~vGP   93 (423)
T KOG2733|consen   84 ------ARVIVNCVGP   93 (423)
T ss_pred             ------hEEEEecccc
Confidence                  5799999995

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.10  E-value=2.9e-05  Score=65.08  Aligned_cols=125  Identities=23%  Similarity=0.239  Sum_probs=89.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      -+..|-++-|-||+|.+|+-++.+|++.|-.|++-.|..+.--   .++    +..+.-.++.++..|+.|+++++++++
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~l----kvmGdLGQvl~~~fd~~DedSIr~vvk  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHL----KVMGDLGQVLFMKFDLRDEDSIRAVVK  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hhe----eecccccceeeeccCCCCHHHHHHHHH
Confidence            3456778899999999999999999999999999988643221   111    112333689999999999999999887


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      .       -+++||-.|--....  +++      .-++|..++-.+++.+    ++.+--++|.+|+..+.
T Consensus       130 ~-------sNVVINLIGrd~eTk--nf~------f~Dvn~~~aerlAric----ke~GVerfIhvS~Lgan  181 (391)
T KOG2865|consen  130 H-------SNVVINLIGRDYETK--NFS------FEDVNVHIAERLARIC----KEAGVERFIHVSCLGAN  181 (391)
T ss_pred             h-------CcEEEEeeccccccC--Ccc------cccccchHHHHHHHHH----HhhChhheeehhhcccc
Confidence            4       589999988532211  111      2357777777766665    33344478999987644

>PRK09620 hypothetical protein; Provisional

Probab=98.09  E-value=4.6e-06  Score=68.95  Aligned_cols=85  Identities=18%  Similarity=0.168  Sum_probs=52.2

Q ss_pred             CCCCEEEEeCCC----------------CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEE
Q 025705           63 VNDLTCIVTGST----------------SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME  126 (249)
Q Consensus        63 ~~~~~vlItGas----------------~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  126 (249)
                      +.||.|+||+|.                |.+|.++|++|+++|++|+++++.......   ..    +   ....+..+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~----~---~~~~~~~V~   70 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI----N---NQLELHPFE   70 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc----C---CceeEEEEe
Confidence            468999999885                999999999999999999988864211000   00    0   001233333


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCC
Q 025705          127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG  162 (249)
Q Consensus       127 ~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~  162 (249)
                      .|.    ++.+.++++.+. .++|++||+|++....
T Consensus        71 s~~----d~~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         71 GII----DLQDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             cHH----HHHHHHHHHhcc-cCCCEEEECcccccee
Confidence            322    222233333221 2589999999986543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.00  E-value=8.2e-05  Score=58.52  Aligned_cols=110  Identities=16%  Similarity=0.168  Sum_probs=78.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .+.|.||||-.|..++++..++|+.|..+.|++.+....              ..+.+.+.|+.|.+++.+.+.      
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------------~~~~i~q~Difd~~~~a~~l~------   61 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------------QGVTILQKDIFDLTSLASDLA------   61 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------------ccceeecccccChhhhHhhhc------
Confidence            477999999999999999999999999999998776433              146678899999998855443      


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                       +.|++|..-|....++.     +   ...        ...+.++..++..+..+++.|+....+.-
T Consensus        62 -g~DaVIsA~~~~~~~~~-----~---~~~--------k~~~~li~~l~~agv~RllVVGGAGSL~i  111 (211)
T COG2910          62 -GHDAVISAFGAGASDND-----E---LHS--------KSIEALIEALKGAGVPRLLVVGGAGSLEI  111 (211)
T ss_pred             -CCceEEEeccCCCCChh-----H---HHH--------HHHHHHHHHHhhcCCeeEEEEcCccceEE
Confidence             78999998886532211     1   111        11344444455546678999888766554

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.95  E-value=3.9e-05  Score=66.84  Aligned_cols=74  Identities=23%  Similarity=0.320  Sum_probs=54.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-C-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAES-G-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~-G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++++++++||||+|.||..+|++|+++ | .++++++|+.+++++...++..               .|+.   ++.+  
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------------~~i~---~l~~--  211 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------------GKIL---SLEE--  211 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------------ccHH---hHHH--
Confidence            588999999999999999999999864 6 4899999998877666544321               1222   1221  


Q ss_pred             HHHhccCCCccEEEeccccCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~  160 (249)
                           .....|++|+.++...
T Consensus       212 -----~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        212 -----ALPEADIVVWVASMPK  227 (340)
T ss_pred             -----HHccCCEEEECCcCCc
Confidence                 2346899999998753

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.89  E-value=0.00011  Score=63.81  Aligned_cols=119  Identities=13%  Similarity=0.073  Sum_probs=73.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+.+.+.|+|++|.+|..+|..|+.++  .+++++|++  .++..+-++....      ..  ....+.+|..+..+.+ 
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~------~~--~~v~~~td~~~~~~~l-   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHID------TP--AKVTGYADGELWEKAL-   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcC------cC--ceEEEecCCCchHHHh-
Confidence            345689999999999999999999665  479999993  2332222333311      11  1223454533322222 


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                            .+.|++|+++|....      +.+.....+..|+...-.+.+.    |.+.+.-++|+++|-
T Consensus        75 ------~gaDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i~~~----i~~~~~~~iviv~SN  126 (321)
T PTZ00325         75 ------RGADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDLVAA----VASSAPKAIVGIVSN  126 (321)
T ss_pred             ------CCCCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHH----HHHHCCCeEEEEecC
Confidence                  368999999997532      1123566777887655555544    555555577777774

>PLN00106 malate dehydrogenase

Probab=97.89  E-value=5.3e-05  Score=65.75  Aligned_cols=116  Identities=14%  Similarity=0.111  Sum_probs=71.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+.|.|||++|.+|..+|..|+.++.  .++++|+++  ++..+-++....      ...  ...|+++.++..+.    
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~------~~~--~i~~~~~~~d~~~~----   83 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN------TPA--QVRGFLGDDQLGDA----   83 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC------cCc--eEEEEeCCCCHHHH----
Confidence            36899999999999999999997765  799999987  222222333211      111  12243333333222    


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                         +.+.|++|+.||....      +.+.+...+..|+.....+.+.+    .+.+...|++++|
T Consensus        84 ---l~~aDiVVitAG~~~~------~g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvS  135 (323)
T PLN00106         84 ---LKGADLVIIPAGVPRK------PGMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIIS  135 (323)
T ss_pred             ---cCCCCEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeC
Confidence               2379999999998532      11335667778877655555554    4444445665555

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.88  E-value=0.00017  Score=61.21  Aligned_cols=76  Identities=24%  Similarity=0.400  Sum_probs=55.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++++++|+|+ ||+|++++..|++.|++|.+++|+.++.++..+++...       ..+.....|     +.       
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~-------~~~~~~~~~-----~~-------  174 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY-------GEIQAFSMD-----EL-------  174 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc-------CceEEechh-----hh-------
Confidence            46789999999 69999999999999999999999998888777665431       112222111     10       


Q ss_pred             hccCCCccEEEeccccCC
Q 025705          143 NGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       143 ~~~~g~id~linnag~~~  160 (249)
                        .....|++||+.+...
T Consensus       175 --~~~~~DivInatp~gm  190 (270)
T TIGR00507       175 --PLHRVDLIINATSAGM  190 (270)
T ss_pred             --cccCccEEEECCCCCC
Confidence              1236899999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.86  E-value=6.2e-05  Score=68.39  Aligned_cols=111  Identities=14%  Similarity=0.056  Sum_probs=70.5

Q ss_pred             CCCEEE----EeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           64 NDLTCI----VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        64 ~~~~vl----ItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .|..++    |+||++|+|.++++.|...|+.|+.+.+...+...            ....++..+.+|.+..+..    
T Consensus        33 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~------------~~~~~~~~~~~d~~~~~~~----   96 (450)
T PRK08261         33 PGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA------------GWGDRFGALVFDATGITDP----   96 (450)
T ss_pred             CCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc------------CcCCcccEEEEECCCCCCH----
Confidence            345566    88989999999999999999999987655331100            0001222222333332222    


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                                                    +++        .+.+.+++.+++.|.+  .|+||+++|..+..+      
T Consensus        97 ------------------------------~~l--------~~~~~~~~~~l~~l~~--~griv~i~s~~~~~~------  130 (450)
T PRK08261         97 ------------------------------ADL--------KALYEFFHPVLRSLAP--CGRVVVLGRPPEAAA------  130 (450)
T ss_pred             ------------------------------HHH--------HHHHHHHHHHHHhccC--CCEEEEEccccccCC------
Confidence                                          111        1334567777787754  479999999765422      


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ...|+++|+|+.+|+|.
T Consensus       131 ------------~~~~~~akaal~gl~rs  147 (450)
T PRK08261        131 ------------DPAAAAAQRALEGFTRS  147 (450)
T ss_pred             ------------chHHHHHHHHHHHHHHH
Confidence                        23599999999999874

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.79  E-value=0.00016  Score=55.67  Aligned_cols=77  Identities=26%  Similarity=0.461  Sum_probs=55.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +.++++++|+|+ |++|.++++.|.+.| .+|.+++|+.++.++..+++...           .+..+..+.++.     
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-----   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-----------GIAIAYLDLEEL-----   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-----------ccceeecchhhc-----
Confidence            356789999998 899999999999996 68999999988877766654431           012233333322     


Q ss_pred             HHhccCCCccEEEeccccCC
Q 025705          141 AWNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~  160 (249)
                           ..+.|++|++.....
T Consensus        79 -----~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 -----LAEADLIINTTPVGM   93 (155)
T ss_pred             -----cccCCEEEeCcCCCC
Confidence                 246899999987643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.78  E-value=0.0001  Score=58.92  Aligned_cols=80  Identities=14%  Similarity=0.238  Sum_probs=49.7

Q ss_pred             CCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEE
Q 025705           63 VNDLTCIVTGS----------------TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME  126 (249)
Q Consensus        63 ~~~~~vlItGa----------------s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  126 (249)
                      ++||.||||+|                ||-.|.++|+++..+|++|+++..... +..              ...+..+ 
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------------p~~~~~i-   64 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------------PPGVKVI-   64 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------------TTEEEE-
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------------cccceEE-
Confidence            46889999977                678999999999999999999887631 110              0234443 


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCC
Q 025705          127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG  162 (249)
Q Consensus       127 ~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~  162 (249)
                       ++.+.+++.+.+.+..   ..-|++|++|+++...
T Consensus        65 -~v~sa~em~~~~~~~~---~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   65 -RVESAEEMLEAVKELL---PSADIIIMAAAVSDFR   96 (185)
T ss_dssp             -E-SSHHHHHHHHHHHG---GGGSEEEE-SB--SEE
T ss_pred             -Eecchhhhhhhhcccc---CcceeEEEecchhhee
Confidence             5666666666555543   3459999999987543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.75  E-value=0.00013  Score=67.59  Aligned_cols=47  Identities=34%  Similarity=0.507  Sum_probs=41.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~  109 (249)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            577899999999 59999999999999999999999988777665543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.74  E-value=0.00011  Score=64.00  Aligned_cols=115  Identities=10%  Similarity=0.061  Sum_probs=65.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-------CEEEEEEcChH--HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESG-------AHVVMAVRNLK--AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G-------~~Vil~~r~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .++||||+|.+|.+++..|+.++       .+|+++++++.  .++...-++.+..         .....|+....+..+
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~---------~~~~~~~~~~~~~~~   74 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA---------FPLLKSVVATTDPEE   74 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc---------ccccCCceecCCHHH
Confidence            48999999999999999999854       58999999653  1222111111100         011113322222212


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-C-CCeEEEEcC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-S-PSRIINVNS  207 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~-~g~Iv~vsS  207 (249)
                      .       +.+.|++|+.||.....   ..+.   .+.++.|+.    +.+.+.+.+.+. . .+.++++|.
T Consensus        75 ~-------l~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          75 A-------FKDVDVAILVGAMPRKE---GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             H-------hCCCCEEEEeCCcCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence            1       23699999999985321   2222   455666644    445555555554 2 456666665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.74  E-value=0.00056  Score=58.99  Aligned_cols=80  Identities=21%  Similarity=0.260  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+++++|+|+++++|.+++..+...|++|++++++.++.+..    .. .   +  ..   ...|..+.+..+.+.+...
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~-~---~--~~---~~~~~~~~~~~~~~~~~~~  232 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KE-L---G--AD---YVIDYRKEDFVREVRELTG  232 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c---C--CC---eEEecCChHHHHHHHHHhC
Confidence            568999999999999999999999999999999987665433    11 1   1  11   1236666666665555443


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  .++|++++++|.
T Consensus       233 ~--~~~d~~i~~~g~  245 (342)
T cd08266         233 K--RGVDVVVEHVGA  245 (342)
T ss_pred             C--CCCcEEEECCcH
Confidence            2  369999999883

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.68  E-value=0.00029  Score=57.31  Aligned_cols=137  Identities=19%  Similarity=0.159  Sum_probs=82.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA---HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~---~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++++|||++|=+|++|.+.+.++|.   +.++.+.                           -.+|+++.++++++++..
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------------kd~DLt~~a~t~~lF~~e   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------------KDADLTNLADTRALFESE   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------------ccccccchHHHHHHHhcc
Confidence            6799999999999999999999886   3444332                           258999999999999874


Q ss_pred             hccCCCccEEEeccccCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc-cc
Q 025705          143 NGRLGPLHVLINNAGIFSIGE-PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE-DM  220 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~-~~  220 (249)
                           ++.++|+.|++.+.-. -.....+-+...+++|-    ++.+.+..+    +--.+++..|.+-+-....++ |-
T Consensus        55 -----kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~ind----NVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdE  121 (315)
T KOG1431|consen   55 -----KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIND----NVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDE  121 (315)
T ss_pred             -----CCceeeehHhhhcchhhcCCCchHHHhhcceech----hHHHHHHHh----chhhhhhhcceeecCCCCCCCCCH
Confidence                 6888999988653211 12335566666666553    233333222    222455555544322111111 11


Q ss_pred             ccccccccCCCcccchhhHHHH
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQ  242 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal  242 (249)
                      ++.-...+-|....|+-+|..+
T Consensus       122 tmvh~gpphpsN~gYsyAKr~i  143 (315)
T KOG1431|consen  122 TMVHNGPPHPSNFGYSYAKRMI  143 (315)
T ss_pred             HHhccCCCCCCchHHHHHHHHH
Confidence            1122233346667799999544

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.67  E-value=0.00067  Score=57.91  Aligned_cols=80  Identities=19%  Similarity=0.240  Sum_probs=55.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+|+++++|.++++.+...|++|++++++.++.+.. .++       +  .+   ..+|..+.+..+.+.+...
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-------g--~~---~~~~~~~~~~~~~~~~~~~  210 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA-------G--AD---AVFNYRAEDLADRILAATA  210 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-------C--CC---EEEeCCCcCHHHHHHHHcC
Confidence            478999999999999999999999999999999987654443 111       1  11   1235555554444433332


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  ..+|++++++|.
T Consensus       211 ~--~~~d~vi~~~~~  223 (325)
T cd08253         211 G--QGVDVIIEVLAN  223 (325)
T ss_pred             C--CceEEEEECCch
Confidence            2  369999999873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.66  E-value=0.0002  Score=65.10  Aligned_cols=79  Identities=20%  Similarity=0.208  Sum_probs=53.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++|+++|||+++ +|+++|+.|++.|++|++.+++........+++.+.        .+.+...+  +...+   .+  
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--------g~~~~~~~--~~~~~---~~--   66 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--------GIKVICGS--HPLEL---LD--   66 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--------CCEEEeCC--CCHHH---hc--
Confidence            5789999999986 999999999999999999998765444444444431        12222211  11111   11  


Q ss_pred             hccCCCccEEEeccccCCC
Q 025705          143 NGRLGPLHVLINNAGIFSI  161 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~  161 (249)
                          ..+|++|+++|+...
T Consensus        67 ----~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 ----EDFDLMVKNPGIPYT   81 (447)
T ss_pred             ----CcCCEEEECCCCCCC
Confidence                148999999998643

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.63  E-value=0.0016  Score=57.89  Aligned_cols=112  Identities=15%  Similarity=0.079  Sum_probs=67.7

Q ss_pred             hhHHhHHHHHHHHHHHHHHHHHHHHHHhhhcC----CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           25 KEALGWMEWLRGWLYVIYEMLFQRILASHLQN----PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      ...+.++..+.|+...+.-.....   .....    ......+.++.++|.|+ |.+|+..++.+...|++|++++|+++
T Consensus       126 ~~~l~~~~~iaG~~av~~aa~~~~---~~~~g~~~~~~~~~~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~  201 (370)
T TIGR00518       126 LPLLAPMSEVAGRLAAQVGAYHLE---KTQGGRGVLLGGVPGVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINID  201 (370)
T ss_pred             CccccchhHHHHHHHHHHHHHHhH---hhcCCcceeecCCCCCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            345566677777655433322111   11110    01122356677999988 68999999999999999999999987


Q ss_pred             HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCCCccEEEeccccC
Q 025705          101 AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~  159 (249)
                      +++.......          .  .+..+..+.+.+.+.+       ...|++|++++..
T Consensus       202 ~~~~l~~~~g----------~--~v~~~~~~~~~l~~~l-------~~aDvVI~a~~~~  241 (370)
T TIGR00518       202 RLRQLDAEFG----------G--RIHTRYSNAYEIEDAV-------KRADLLIGAVLIP  241 (370)
T ss_pred             HHHHHHHhcC----------c--eeEeccCCHHHHHHHH-------ccCCEEEEccccC
Confidence            7654432211          1  1223445555544333       2579999998764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.57  E-value=0.0044  Score=47.27  Aligned_cols=115  Identities=14%  Similarity=0.144  Sum_probs=73.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|+|++|.+|.++|..|...+.  +++++|++++.++..+.++..-.....  .+.....   .+.+.          
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~--~~~~i~~---~~~~~----------   66 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLP--SPVRITS---GDYEA----------   66 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGST--EEEEEEE---SSGGG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcc--ccccccc---ccccc----------
Confidence            478999999999999999999875  799999999988888888777543221  1233333   22222          


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS  207 (249)
                       ..+-|++|..||....   ...+   -.+.++.|..-    .+.+.+.+.+. ..+.++.++-
T Consensus        67 -~~~aDivvitag~~~~---~g~s---R~~ll~~N~~i----~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   67 -LKDADIVVITAGVPRK---PGMS---RLDLLEANAKI----VKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             -GTTESEEEETTSTSSS---TTSS---HHHHHHHHHHH----HHHHHHHHHHHSTTSEEEE-SS
T ss_pred             -cccccEEEEecccccc---cccc---HHHHHHHhHhH----HHHHHHHHHHhCCccEEEEeCC
Confidence             2368999999997531   1122   33445555443    44444444433 3356666654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.50  E-value=0.00011  Score=60.10  Aligned_cols=149  Identities=19%  Similarity=0.166  Sum_probs=92.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAES-GA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~-G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+...++|||+-|-+|..+|..|-.+ |- +|++.+....... +.    +         .--++..|+-|...+++++-
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-V~----~---------~GPyIy~DILD~K~L~eIVV  107 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-VT----D---------VGPYIYLDILDQKSLEEIVV  107 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-hc----c---------cCCchhhhhhccccHHHhhc
Confidence            34467999999999999999988865 65 6777665433221 11    1         11345578888888877654


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC-CCC---
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG-FVD---  216 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~-~~~---  216 (249)
                      .     .+||.+||-.+..+.     +.+....-..++|+.|.-++.+.+..+-      -=+|+-|.-|-+| ..+   
T Consensus       108 n-----~RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~~k------L~iFVPSTIGAFGPtSPRNP  171 (366)
T KOG2774|consen  108 N-----KRIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAKHK------LKVFVPSTIGAFGPTSPRNP  171 (366)
T ss_pred             c-----cccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHHcC------eeEeecccccccCCCCCCCC
Confidence            3     389999998775321     1223334456899999888888765442      3355555544444 322   


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhh
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      .+++...      -+...||.||--.+-+..
T Consensus       172 TPdltIQ------RPRTIYGVSKVHAEL~GE  196 (366)
T KOG2774|consen  172 TPDLTIQ------RPRTIYGVSKVHAELLGE  196 (366)
T ss_pred             CCCeeee------cCceeechhHHHHHHHHH
Confidence            1122111      455789999976665543

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.45  E-value=0.0011  Score=56.59  Aligned_cols=49  Identities=18%  Similarity=0.269  Sum_probs=42.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQE  111 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~  111 (249)
                      +.++|+++|.|+ ||-|++++..|++.|+ +|.++.|+.++.++..+++..
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            356789999998 7999999999999998 799999999999888777654

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.44  E-value=0.0021  Score=55.51  Aligned_cols=114  Identities=11%  Similarity=0.129  Sum_probs=70.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|.|+ |++|.++|..|+..|  .+|+++++++++++....++.+......  .......   .+.+.       +  
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~--~~~~i~~---~~~~~-------l--   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLP--SPVKIKA---GDYSD-------C--   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccC--CCeEEEc---CCHHH-------h--
Confidence            5788896 899999999999999  4899999999998888888766432111  1222221   22221       1  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                        .+-|++|+++|....   ...+.   ...++.|..    +.+...+.+.+.. .+.++++|-
T Consensus        67 --~~aDIVIitag~~~~---~g~~R---~dll~~N~~----i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          67 --KDADIVVITAGAPQK---PGETR---LDLLEKNAK----IMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             --CCCCEEEEccCCCCC---CCCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence              368999999997532   12222   234444543    3444444444432 456666664

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.44  E-value=0.00075  Score=57.64  Aligned_cols=49  Identities=22%  Similarity=0.361  Sum_probs=42.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQE  111 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~  111 (249)
                      +++++.++|.|+ ||.|++++..|++.|+ +|.++.|+.++.++.++++..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~  171 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ  171 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh
Confidence            356889999987 7999999999999998 799999999998888776543

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.42  E-value=0.0013  Score=56.21  Aligned_cols=50  Identities=16%  Similarity=0.209  Sum_probs=43.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHh
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEE  112 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~  112 (249)
                      +.+++.++|.|+ ||.|++++..|+..|+ +|.+++|+.++.++..+++.+.
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            456789999998 5899999999999998 7999999999998888877653

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.40  E-value=0.00055  Score=58.33  Aligned_cols=48  Identities=21%  Similarity=0.405  Sum_probs=42.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQ  110 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~  110 (249)
                      ++.+++++|+|+ ||+|++++..|+..| .+|.+++|+.+++++..+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            577899999997 899999999999999 699999999988877776654

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.36  E-value=0.0025  Score=54.57  Aligned_cols=42  Identities=24%  Similarity=0.317  Sum_probs=37.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .++.|++++|.|. |++|+++|+.|...|++|.+++|++++.+
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3788999999999 56999999999999999999999976543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.35  E-value=0.0021  Score=56.34  Aligned_cols=65  Identities=17%  Similarity=0.267  Sum_probs=47.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh---------------------HHHHHHHHHHHHhhcCCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL---------------------KAANELIQKWQEEWSGKGL  118 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~---------------------~~~~~~~~~~~~~~~~~~~  118 (249)
                      ..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|++.                     .+.+...+++.+..+    
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp----   94 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS----   94 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC----
Confidence            4567789999997 6899999999999998 899998863                     244555555555332    


Q ss_pred             CCceEEEEccCC
Q 025705          119 PLNIEAMELDLL  130 (249)
Q Consensus       119 ~~~v~~~~~D~~  130 (249)
                      ..++..+..|++
T Consensus        95 ~v~i~~~~~~~~  106 (338)
T PRK12475         95 EVEIVPVVTDVT  106 (338)
T ss_pred             CcEEEEEeccCC
Confidence            356667766765

>PRK06849 hypothetical protein; Provisional

Probab=97.34  E-value=0.0024  Score=56.96  Aligned_cols=82  Identities=16%  Similarity=0.176  Sum_probs=53.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .++|||||++.++|.++++.|.+.|++|++++.++.........+ +         +...+...-.+.+...+.+.++.+
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-d---------~~~~~p~p~~d~~~~~~~L~~i~~   73 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-D---------GFYTIPSPRWDPDAYIQALLSIVQ   73 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-h---------heEEeCCCCCCHHHHHHHHHHHHH
Confidence            488999999999999999999999999999998865543221111 1         122222122344333333334444


Q ss_pred             cCCCccEEEeccc
Q 025705          145 RLGPLHVLINNAG  157 (249)
Q Consensus       145 ~~g~id~linnag  157 (249)
                      +. ++|++|-...
T Consensus        74 ~~-~id~vIP~~e   85 (389)
T PRK06849         74 RE-NIDLLIPTCE   85 (389)
T ss_pred             Hc-CCCEEEECCh
Confidence            43 5899998765

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.32  E-value=0.0012  Score=57.45  Aligned_cols=81  Identities=14%  Similarity=0.197  Sum_probs=53.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|.+++|+||++++|..++..+...|++|+.++++.++.+...+++.         .. .+  .|..+.++..+.+.+.
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lG---------a~-~v--i~~~~~~~~~~~i~~~  217 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLG---------FD-DA--FNYKEEPDLDAALKRY  217 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC---------Cc-ee--EEcCCcccHHHHHHHh
Confidence            357899999999999999998888899999999988776554432221         11 11  2322222333333333


Q ss_pred             hccCCCccEEEeccc
Q 025705          143 NGRLGPLHVLINNAG  157 (249)
Q Consensus       143 ~~~~g~id~linnag  157 (249)
                      ..  +++|+++++.|
T Consensus       218 ~~--~gvd~v~d~~g  230 (338)
T cd08295         218 FP--NGIDIYFDNVG  230 (338)
T ss_pred             CC--CCcEEEEECCC
Confidence            22  36899999876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.31  E-value=0.0021  Score=54.79  Aligned_cols=50  Identities=30%  Similarity=0.438  Sum_probs=44.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQE  111 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~  111 (249)
                      .+.+++.++|.||+ |-+++++..|++.|+ +|.++.|+.+++++.++.+.+
T Consensus       122 ~~~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~  172 (283)
T COG0169         122 VDVTGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGE  172 (283)
T ss_pred             cccCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence            45578999999976 899999999999996 799999999999988888776

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.30  E-value=0.0043  Score=54.12  Aligned_cols=79  Identities=20%  Similarity=0.308  Sum_probs=50.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      |+++||+||+||+|...++.....|+.++++..+.++.+ ..+++-.         +   ...|..+.+ +.+.+.++..
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGA---------d---~vi~y~~~~-~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGA---------D---HVINYREED-FVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCC---------C---EEEcCCccc-HHHHHHHHcC
Confidence            899999999999999999988899977777666655544 3222211         1   122344444 3232333222


Q ss_pred             cCCCccEEEecccc
Q 025705          145 RLGPLHVLINNAGI  158 (249)
Q Consensus       145 ~~g~id~linnag~  158 (249)
                      . .++|+++...|.
T Consensus       209 g-~gvDvv~D~vG~  221 (326)
T COG0604         209 G-KGVDVVLDTVGG  221 (326)
T ss_pred             C-CCceEEEECCCH
Confidence            1 259999999885

>cd00704 MDH Malate dehydrogenase

Probab=97.25  E-value=0.0023  Score=55.74  Aligned_cols=110  Identities=13%  Similarity=0.077  Sum_probs=65.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH--HH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD--SV  135 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~--~v  135 (249)
                      .+.||||+|.+|..++..|+.+|.       .++++|+++  +.++..                    ..|+.|..  ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~--------------------~~Dl~d~~~~~~   61 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV--------------------VMELQDCAFPLL   61 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee--------------------eeehhhhccccc
Confidence            489999999999999999998764       499999986  433322                    23333321  00


Q ss_pred             H--HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC--CCCeEEEEc
Q 025705          136 V--RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG--SPSRIINVN  206 (249)
Q Consensus       136 ~--~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~--~~g~Iv~vs  206 (249)
                      .  .+.....+.+.+.|++|+.||.... +  ..+   -...++.|    ..+.+.+.+.+.+.  ..+.++++|
T Consensus        62 ~~~~i~~~~~~~~~~aDiVVitAG~~~~-~--g~t---R~dll~~N----~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          62 KGVVITTDPEEAFKDVDVAILVGAFPRK-P--GME---RADLLRKN----AKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             CCcEEecChHHHhCCCCEEEEeCCCCCC-c--CCc---HHHHHHHh----HHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            0  0001111223479999999998532 1  223   23445555    44566666666665  245566655

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.24  E-value=0.0017  Score=58.45  Aligned_cols=48  Identities=13%  Similarity=0.365  Sum_probs=41.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~  109 (249)
                      .++.+++++|.|+ ||+|+.+++.|+..|+ ++.++.|+.++.++..+++
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            4578899999999 8999999999999996 7999999988877665543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.23  E-value=0.00075  Score=54.67  Aligned_cols=48  Identities=25%  Similarity=0.311  Sum_probs=41.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~  108 (249)
                      ..+++||+++|+|.+ .+|..+|+.|.+.|++|++.+++++++++..++
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            456899999999996 899999999999999999999998776665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.22  E-value=0.0017  Score=57.03  Aligned_cols=80  Identities=14%  Similarity=0.204  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|.+++|+|+++++|...+..+...|++|+.++++.++.+...+++.         .+ .+  .|..+.+...+.+.+..
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG---------a~-~v--i~~~~~~~~~~~i~~~~  225 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG---------FD-EA--FNYKEEPDLDAALKRYF  225 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC---------CC-EE--EECCCcccHHHHHHHHC
Confidence            57899999999999999998888899999998888776544322221         11 11  23332223333333332


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      .  +++|+++.++|
T Consensus       226 ~--~gvD~v~d~vG  237 (348)
T PLN03154        226 P--EGIDIYFDNVG  237 (348)
T ss_pred             C--CCcEEEEECCC
Confidence            2  36899999877

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.21  E-value=0.0053  Score=51.01  Aligned_cols=79  Identities=19%  Similarity=0.174  Sum_probs=52.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++++++|+|+++ +|.++++.+...|.+|+.+++++++.+.. ++.    .     .. .  ..|..+.+....+.   
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g-----~~-~--~~~~~~~~~~~~~~---  195 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL----G-----AD-H--VIDYKEEDLEEELR---  195 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh----C-----Cc-e--eccCCcCCHHHHHH---
Confidence            3578999999998 99999999999999999999987654433 111    0     01 1  12443433333333   


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ....+++|++++++|.
T Consensus       196 ~~~~~~~d~vi~~~~~  211 (271)
T cd05188         196 LTGGGGADVVIDAVGG  211 (271)
T ss_pred             HhcCCCCCEEEECCCC
Confidence            1223469999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.20  E-value=0.0039  Score=50.57  Aligned_cols=84  Identities=13%  Similarity=0.245  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC-------------------hHHHHHHHHHHHHhhcCCCCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN-------------------LKAANELIQKWQEEWSGKGLPL  120 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~  120 (249)
                      ..+.+++|+|.| .||+|.++++.|++.|. ++.++|.+                   ..+.+...+++.+..    ...
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n----p~v   91 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN----SDI   91 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC----CCC
Confidence            356778899998 56999999999999998 89999876                   234555555555532    224


Q ss_pred             ceEEEEccCCCHHHHHHHHHHHhccCCCccEEEeccc
Q 025705          121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG  157 (249)
Q Consensus       121 ~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag  157 (249)
                      ++..+..++.+ +.+.+++       .+.|++|.+..
T Consensus        92 ~i~~~~~~i~~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        92 QVTALKERVTA-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             EEEEehhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence            55555555543 3333222       36788888753

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.18  E-value=0.0089  Score=51.90  Aligned_cols=116  Identities=9%  Similarity=0.066  Sum_probs=73.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++.+.|+|+ |++|.++|..++.+|.  .++++|++++.++..+.++....+-.   .++....   .+.+       .
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~---~~~~i~~---~~~~-------~   70 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFT---SPTKIYA---GDYS-------D   70 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhcccc---CCeEEEe---CCHH-------H
Confidence            4578999998 9999999999999987  79999999998888888887743211   1222221   1211       1


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                          +.+-|++|..||.... +  ..+.   ...++.|..    +.+.+.+.+.+.. .+.++++|-
T Consensus        71 ----~~~adivIitag~~~k-~--g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         71 ----CKDADLVVITAGAPQK-P--GETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             ----hCCCCEEEEecCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccC
Confidence                1368999999998532 1  2232   233444533    3344444444432 356666654

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.18  E-value=0.0027  Score=54.08  Aligned_cols=80  Identities=19%  Similarity=0.293  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++++|+|+++++|..++..+...|++|++++++.++.+.. +++       +  ..   ...|..+.+...++.+...
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-------g--~~---~~~~~~~~~~~~~~~~~~~  205 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-------G--AD---VAINYRTEDFAEEVKEATG  205 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-------C--CC---EEEeCCchhHHHHHHHHhC
Confidence            568999999999999999999999999999999887655433 221       1  11   1234444443344333322


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  +++|++++++|.
T Consensus       206 ~--~~~d~vi~~~g~  218 (323)
T cd05276         206 G--RGVDVILDMVGG  218 (323)
T ss_pred             C--CCeEEEEECCch
Confidence            1  369999999884

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.17  E-value=0.0027  Score=55.35  Aligned_cols=113  Identities=12%  Similarity=0.037  Sum_probs=67.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH--H
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV--R  137 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~--~  137 (249)
                      ++.|+|++|.+|.+++..|+.+|.       .++++|++++..                  +......|+.|.....  .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------------~a~g~~~Dl~d~~~~~~~~   62 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------------VLEGVVMELMDCAFPLLDG   62 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------------ccceeEeehhcccchhcCc
Confidence            378999999999999999998654       499999865421                  1122334554443110  0


Q ss_pred             HH--HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC--CCCeEEEEcC
Q 025705          138 FS--EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG--SPSRIINVNS  207 (249)
Q Consensus       138 ~~--~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~--~~g~Iv~vsS  207 (249)
                      ..  ....+.+.+.|++|+.||.....      .+...+.++.|+    .+.+.+.+.+.+.  ..+.|+++|-
T Consensus        63 ~~~~~~~~~~~~~aDiVVitAG~~~~~------~~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        63 VVPTHDPAVAFTDVDVAILVGAFPRKE------GMERRDLLSKNV----KIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             eeccCChHHHhCCCCEEEEcCCCCCCC------CCcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            00  01112234799999999985321      123455666664    4556666666665  2466666664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.16  E-value=0.00081  Score=61.16  Aligned_cols=80  Identities=18%  Similarity=0.229  Sum_probs=55.0

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEE
Q 025705           62 PVNDLTCIVTGS----------------TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM  125 (249)
Q Consensus        62 ~~~~~~vlItGa----------------s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~  125 (249)
                      +++||.||||+|                ||-.|.++|+.+..+|++|.++.-... +       .       ....+.++
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~-------~p~~v~~i  317 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A-------DPQGVKVI  317 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C-------CCCCceEE
Confidence            589999999988                678999999999999999999874321 0       0       01233443


Q ss_pred             EccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCC
Q 025705          126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG  162 (249)
Q Consensus       126 ~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~  162 (249)
                        ++.+.+++.+.+   .+.+. .|++|.+|++....
T Consensus       318 --~V~ta~eM~~av---~~~~~-~Di~I~aAAVaDyr  348 (475)
T PRK13982        318 --HVESARQMLAAV---EAALP-ADIAIFAAAVADWR  348 (475)
T ss_pred             --EecCHHHHHHHH---HhhCC-CCEEEEecccccee
Confidence              344445444444   44343 69999999986543

>PRK05086 malate dehydrogenase; Provisional

Probab=97.16  E-value=0.0012  Score=57.19  Aligned_cols=33  Identities=24%  Similarity=0.337  Sum_probs=27.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-c--CCEEEEEEcCh
Q 025705           67 TCIVTGSTSGIGREIARQLAE-S--GAHVVMAVRNL   99 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~-~--G~~Vil~~r~~   99 (249)
                      .++|.||+|++|.+++..+.. .  +..+++++|++
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~   37 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP   37 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC
Confidence            589999999999999998865 2  34788888874

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.14  E-value=0.0028  Score=54.88  Aligned_cols=80  Identities=18%  Similarity=0.216  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|.+++|+|+++++|..+++.+...|++|+.++++.++.+.. .++       +  .+ .+  .|..+.+...+.++...
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-------G--a~-~v--i~~~~~~~~~~~~~~~~  204 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-------G--FD-VA--FNYKTVKSLEETLKKAS  204 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-------C--CC-EE--EeccccccHHHHHHHhC
Confidence            578999999999999999888888899999999887665433 221       1  11 11  23333233444444432


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  +++|+++.+.|.
T Consensus       205 ~--~gvdvv~d~~G~  217 (325)
T TIGR02825       205 P--DGYDCYFDNVGG  217 (325)
T ss_pred             C--CCeEEEEECCCH
Confidence            2  369999998773

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.13  E-value=0.0039  Score=53.41  Aligned_cols=48  Identities=21%  Similarity=0.233  Sum_probs=38.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh---HHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL---KAANELIQKWQ  110 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~---~~~~~~~~~~~  110 (249)
                      ++++|+++|.|+ ||-+++++..|+..|+ +|.++.|+.   +++++.++++.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            467899999997 5669999999999997 899999995   46666655553

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.08  E-value=0.0029  Score=55.16  Aligned_cols=79  Identities=16%  Similarity=0.143  Sum_probs=51.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +.+++|+||++++|...++.+...|+ +|+.+++++++.+...+++.         .. .+  .|..+. ++.+.+.++.
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG---------a~-~v--i~~~~~-~~~~~i~~~~  221 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG---------FD-AA--INYKTD-NVAERLRELC  221 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC---------Cc-EE--EECCCC-CHHHHHHHHC
Confidence            48999999999999999888888899 79999988776554433221         11 11  222222 2333333332


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  +++|++++++|.
T Consensus       222 ~--~gvd~vid~~g~  234 (345)
T cd08293         222 P--EGVDVYFDNVGG  234 (345)
T ss_pred             C--CCceEEEECCCc
Confidence            2  369999998773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.07  E-value=0.0018  Score=55.63  Aligned_cols=76  Identities=20%  Similarity=0.266  Sum_probs=59.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ...+|-||+|..|+-+|++|+++|.+-++.+||..++..+..++-.         +...+.+++  ++.+++.++     
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~---------~~~~~p~~~--p~~~~~~~~-----   70 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP---------EAAVFPLGV--PAALEAMAS-----   70 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc---------cccccCCCC--HHHHHHHHh-----
Confidence            4689999999999999999999999999999999999888776544         333444444  555555444     


Q ss_pred             CCCccEEEeccccC
Q 025705          146 LGPLHVLINNAGIF  159 (249)
Q Consensus       146 ~g~id~linnag~~  159 (249)
                        +.++++||+|-.
T Consensus        71 --~~~VVlncvGPy   82 (382)
T COG3268          71 --RTQVVLNCVGPY   82 (382)
T ss_pred             --cceEEEeccccc
Confidence              689999999953

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.05  E-value=0.014  Score=53.78  Aligned_cols=43  Identities=19%  Similarity=0.122  Sum_probs=36.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ...+.+|+|+|++ .+|...+..+...|++|+++|+++++++..
T Consensus       162 ~~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a  204 (509)
T PRK09424        162 KVPPAKVLVIGAG-VAGLAAIGAAGSLGAIVRAFDTRPEVAEQV  204 (509)
T ss_pred             CcCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3568899999986 899999999999999999999998876544

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.03  E-value=0.0024  Score=55.02  Aligned_cols=41  Identities=24%  Similarity=0.331  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE  104 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~  104 (249)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++.++.+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            46889999999999999999999999999999988765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.03  E-value=0.0062  Score=54.23  Aligned_cols=51  Identities=16%  Similarity=0.232  Sum_probs=40.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC-------------------hHHHHHHHHHHHHhh
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN-------------------LKAANELIQKWQEEW  113 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~~~~~~  113 (249)
                      .+++++|+|.|+ ||+|..+++.|++.|. ++.++|++                   ..+.+...+++.+..
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n  202 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN  202 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC
Confidence            456788888866 7999999999999999 79999987                   456666666666543

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.02  E-value=0.0075  Score=52.89  Aligned_cols=37  Identities=19%  Similarity=0.421  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      ..+..++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3466788999998 6999999999999999 89999986

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.98  E-value=0.0081  Score=52.30  Aligned_cols=42  Identities=19%  Similarity=0.204  Sum_probs=36.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      -+|++|+|+|++ |+|...++.....|++|+.++|++++++..
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a  206 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA  206 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence            358999999999 999988877777999999999999887655

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.95  E-value=0.037  Score=51.00  Aligned_cols=85  Identities=19%  Similarity=0.156  Sum_probs=57.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC-----------
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL-----------  130 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-----------  130 (249)
                      ...+.+++|.|+ |.+|...+..+...|++|++++++.++++... ++           ...++..|..           
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l-----------Ga~~v~v~~~e~g~~~~gYa~  227 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM-----------GAEFLELDFKEEGGSGDGYAK  227 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----------CCeEEecccccccccccccee
Confidence            455689999996 79999999999999999999999987654332 22           1223333331           


Q ss_pred             --CHHHHHHHHHHHhccCCCccEEEeccccC
Q 025705          131 --SLDSVVRFSEAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       131 --~~~~v~~~~~~~~~~~g~id~linnag~~  159 (249)
                        +.+..+...+.+.+...+.|++|+++-+.
T Consensus       228 ~~s~~~~~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       228 VMSEEFIAAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             ecCHHHHHHHHHHHHHHhCCCCEEEECcccC
Confidence              13344444444444556799999999443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.92  E-value=0.014  Score=48.85  Aligned_cols=83  Identities=13%  Similarity=0.198  Sum_probs=53.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCCc
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPLN  121 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  121 (249)
                      .+++++|+|.|+ ||+|..+++.|++.|. ++.++|.+.                   .+.+...+++.+..    ...+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln----p~v~  103 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN----PHIA  103 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC----CCCE
Confidence            467789999998 8999999999999998 788887532                   23444444444432    2245


Q ss_pred             eEEEEccCCCHHHHHHHHHHHhccCCCccEEEeccc
Q 025705          122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG  157 (249)
Q Consensus       122 v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag  157 (249)
                      +..+...++. +.+.+++       ...|++|.+..
T Consensus       104 i~~~~~~i~~-~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        104 IETINARLDD-DELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             EEEEeccCCH-HHHHHHH-------hcCCEEEecCC
Confidence            6666655542 2232222       35788887743

>PRK14968 putative methyltransferase; Provisional

Probab=96.90  E-value=0.027  Score=44.50  Aligned_cols=80  Identities=21%  Similarity=0.197  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +++.++-.|++.|.   ++..+++++.+|+.++++++..+...+.+......   ...+.++.+|+.+.         ..
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---~~~~~~~~~d~~~~---------~~   87 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIR---NNGVEVIRSDLFEP---------FR   87 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCC---CcceEEEecccccc---------cc
Confidence            46789999977666   55555666899999999988776666655442111   01267777887442         11


Q ss_pred             ccCCCccEEEeccccCC
Q 025705          144 GRLGPLHVLINNAGIFS  160 (249)
Q Consensus       144 ~~~g~id~linnag~~~  160 (249)
                      +  ..+|.++.|.....
T Consensus        88 ~--~~~d~vi~n~p~~~  102 (188)
T PRK14968         88 G--DKFDVILFNPPYLP  102 (188)
T ss_pred             c--cCceEEEECCCcCC
Confidence            1  26899999877543

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.88  E-value=0.011  Score=48.73  Aligned_cols=83  Identities=16%  Similarity=0.244  Sum_probs=54.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC-------------------hHHHHHHHHHHHHhhcCCCCCCc
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN-------------------LKAANELIQKWQEEWSGKGLPLN  121 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~  121 (249)
                      .+.+++|+|.| .||+|.++|+.|++.|. ++.++|.+                   ..+.+...+++++..    ...+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n----p~~~   92 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN----PDVE   92 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC----CCCE
Confidence            45678899998 56999999999999998 78887542                   234455555555532    2245


Q ss_pred             eEEEEccCCCHHHHHHHHHHHhccCCCccEEEeccc
Q 025705          122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG  157 (249)
Q Consensus       122 v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag  157 (249)
                      +..+..+++ .+.+.+++       .+.|++|.+..
T Consensus        93 i~~~~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          93 IEAYNERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             EEEecceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence            666665653 23333332       25788888755

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.80  E-value=0.017  Score=47.23  Aligned_cols=36  Identities=25%  Similarity=0.423  Sum_probs=31.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      .+++++|+|.|+ ||+|..+++.|++.|. ++.++|.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            456688999996 6999999999999999 69999876

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.80  E-value=0.022  Score=42.87  Aligned_cols=80  Identities=19%  Similarity=0.380  Sum_probs=53.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC-------------------hHHHHHHHHHHHHhhcCCCCCCceEE
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN-------------------LKAANELIQKWQEEWSGKGLPLNIEA  124 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~v~~  124 (249)
                      +++++|.|++ |+|..+++.|++.|. ++.++|.+                   ..+.+...+.+.+..+    ..++..
T Consensus         2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np----~~~v~~   76 (135)
T PF00899_consen    2 NKRVLIIGAG-GVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP----DVEVEA   76 (135)
T ss_dssp             T-EEEEESTS-HHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST----TSEEEE
T ss_pred             CCEEEEECcC-HHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC----ceeeee
Confidence            4678888765 999999999999999 78998852                   2345555555555433    357777


Q ss_pred             EEccCCCHHHHHHHHHHHhccCCCccEEEeccc
Q 025705          125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG  157 (249)
Q Consensus       125 ~~~D~~~~~~v~~~~~~~~~~~g~id~linnag  157 (249)
                      +..++ +.+...++++       +.|++|.+..
T Consensus        77 ~~~~~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   77 IPEKI-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             EESHC-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             eeccc-cccccccccc-------CCCEEEEecC
Confidence            77777 3344444442       5788888743

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.80  E-value=0.0017  Score=43.44  Aligned_cols=32  Identities=25%  Similarity=0.400  Sum_probs=22.5

Q ss_pred             CEEEEeCCCCchHHH--HHHHHHHcCCEEEEEEcC
Q 025705           66 LTCIVTGSTSGIGRE--IARQLAESGAHVVMAVRN   98 (249)
Q Consensus        66 ~~vlItGas~gIG~~--ia~~l~~~G~~Vil~~r~   98 (249)
                      |.|||+|+|+|.|++  ++..| ..|++.+-++..
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            889999999999999  55555 668888877654

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.77  E-value=0.016  Score=51.09  Aligned_cols=65  Identities=17%  Similarity=0.198  Sum_probs=46.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPL  120 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~  120 (249)
                      ..+++.+|+|.|+ ||+|..+++.|++.|. ++.++|.+.                   .+.+..++++++..+.    .
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~----v   98 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPD----V   98 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCC----c
Confidence            3467789999988 6999999999999998 788888642                   4556666666654332    4


Q ss_pred             ceEEEEccCC
Q 025705          121 NIEAMELDLL  130 (249)
Q Consensus       121 ~v~~~~~D~~  130 (249)
                      ++..+..+++
T Consensus        99 ~v~~~~~~i~  108 (355)
T PRK05597         99 KVTVSVRRLT  108 (355)
T ss_pred             EEEEEEeecC
Confidence            5555555554

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.76  E-value=0.0098  Score=50.74  Aligned_cols=79  Identities=20%  Similarity=0.276  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++++|+|+++++|.+++..+...|++|+++.++.++.+.. .++       +  .+.   ..+..+.+....+.+.. 
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-------g--~~~---~~~~~~~~~~~~~~~~~-  204 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-------G--ADI---AINYREEDFVEVVKAET-  204 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-------C--CcE---EEecCchhHHHHHHHHc-
Confidence            568999999999999999999999999999999887665422 211       1  111   12333333333333222 


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      .. .++|++|+++|
T Consensus       205 ~~-~~~d~~i~~~~  217 (325)
T TIGR02824       205 GG-KGVDVILDIVG  217 (325)
T ss_pred             CC-CCeEEEEECCc
Confidence            11 25999999977

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.76  E-value=0.0039  Score=52.40  Aligned_cols=73  Identities=16%  Similarity=0.271  Sum_probs=53.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .++|+||++- |+.++++|.+.|++|+...++....+...    +        .....+..|.-|.+++.+++.+     
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~--------~g~~~v~~g~l~~~~l~~~l~~-----   63 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----I--------HQALTVHTGALDPQELREFLKR-----   63 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----c--------cCCceEEECCCCHHHHHHHHHh-----
Confidence            5899999987 99999999999999999988875433321    1        0122344566677777666654     


Q ss_pred             CCccEEEeccc
Q 025705          147 GPLHVLINNAG  157 (249)
Q Consensus       147 g~id~linnag  157 (249)
                      .++|++|+.+.
T Consensus        64 ~~i~~VIDAtH   74 (256)
T TIGR00715        64 HSIDILVDATH   74 (256)
T ss_pred             cCCCEEEEcCC
Confidence            27999999876

This enzyme was found to be a monomer by gel filtration.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.75  E-value=0.019  Score=51.96  Aligned_cols=116  Identities=9%  Similarity=0.026  Sum_probs=75.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-------CC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAES-------GA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~-------G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      -.|.|+|++|.+|.++|..|+.+       |.  +++++++++++++..+-++.+......  .++.+..   .+.+.  
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~--~~v~i~~---~~ye~--  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLL--REVSIGI---DPYEV--  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhc--CceEEec---CCHHH--
Confidence            35899999999999999999988       65  799999999999998888887431111  1222211   12221  


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc--CCCCeEEEEcC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR--GSPSRIINVNS  207 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~--~~~g~Iv~vsS  207 (249)
                               +.+-|++|..||.... +  ..+   -...++.|.    .+.+...+.+.+  ...+.||++|-
T Consensus       174 ---------~kdaDiVVitAG~prk-p--G~t---R~dLl~~N~----~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        174 ---------FQDAEWALLIGAKPRG-P--GME---RADLLDING----QIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             ---------hCcCCEEEECCCCCCC-C--CCC---HHHHHHHHH----HHHHHHHHHHHHhcCCCeEEEEcCC
Confidence                     2368999999998532 1  222   234555664    355555555655  23466666664

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.74  E-value=0.011  Score=52.00  Aligned_cols=82  Identities=16%  Similarity=0.169  Sum_probs=53.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .-+|+.+||.||++|+|.+.++-....|+..+++.++.+..+ ..+++..            -...|..+++.+++..+.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lGA------------d~vvdy~~~~~~e~~kk~  221 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLGA------------DEVVDYKDENVVELIKKY  221 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcCC------------cEeecCCCHHHHHHHHhh
Confidence            456789999999999999999988888955555555544432 2222111            123577775444443332


Q ss_pred             HhccCCCccEEEeccccC
Q 025705          142 WNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       142 ~~~~~g~id~linnag~~  159 (249)
                      .   .+++|+++-|+|..
T Consensus       222 ~---~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  222 T---GKGVDVVLDCVGGS  236 (347)
T ss_pred             c---CCCccEEEECCCCC
Confidence            2   45899999999974

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.72  E-value=0.008  Score=48.68  Aligned_cols=37  Identities=22%  Similarity=0.447  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      ..+..++|+|.|+ ||+|..+|+.|++.|. +++++|++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3466788999998 5899999999999999 79999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.71  E-value=0.0086  Score=49.41  Aligned_cols=75  Identities=23%  Similarity=0.368  Sum_probs=55.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .++|.|+ |-+|..+|+.|.+.|++|++++++++..++...+-          ..+..+.+|-++++.++++      ..
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----------~~~~~v~gd~t~~~~L~~a------gi   64 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----------LDTHVVIGDATDEDVLEEA------GI   64 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----------cceEEEEecCCCHHHHHhc------CC
Confidence            4556665 47999999999999999999999988876643211          2578888999999877664      11


Q ss_pred             CCccEEEecccc
Q 025705          147 GPLHVLINNAGI  158 (249)
Q Consensus       147 g~id~linnag~  158 (249)
                      ...|++|-..|-
T Consensus        65 ~~aD~vva~t~~   76 (225)
T COG0569          65 DDADAVVAATGN   76 (225)
T ss_pred             CcCCEEEEeeCC
Confidence            257777776664

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.68  E-value=0.006  Score=47.96  Aligned_cols=42  Identities=19%  Similarity=0.260  Sum_probs=37.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAA  102 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~  102 (249)
                      .++.|+.++|.|++.-+|..+|+.|.++|++|.++.|+.+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l   81 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL   81 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH
Confidence            478999999999977789999999999999999999985443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.67  E-value=0.098  Score=45.55  Aligned_cols=124  Identities=12%  Similarity=0.048  Sum_probs=68.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+.+.|.|+ |.+|..+|..++..|. +|+++|.+++.++...-++.......+  ....+..  .+|.+       .+
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~--~~~~I~~--~~d~~-------~l   72 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAG--SNSKVIG--TNNYE-------DI   72 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccC--CCeEEEE--CCCHH-------Hh
Confidence            3467999995 7899999999999995 999999998865433333322211111  1112221  12221       11


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCC
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSV  208 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~  208 (249)
                          .+-|++|+++|......-.+.+.+. .+.+..|+    .+.+.+.+.+.+.. .+.++++|-.
T Consensus        73 ----~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP  130 (321)
T PTZ00082         73 ----AGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNP  130 (321)
T ss_pred             ----CCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCc
Confidence                3689999999986422111111111 33344453    34555555555433 3456666643

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.67  E-value=0.012  Score=42.85  Aligned_cols=71  Identities=27%  Similarity=0.364  Sum_probs=50.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..+...++            .+.++.+|.++++.++++-      ..
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~------------~~~~i~gd~~~~~~l~~a~------i~   61 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE------------GVEVIYGDATDPEVLERAG------IE   61 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT------------TSEEEES-TTSHHHHHHTT------GG
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc------------ccccccccchhhhHHhhcC------cc
Confidence            4667764 799999999999777999999998775444322            3678889999999887641      12


Q ss_pred             CccEEEeccc
Q 025705          148 PLHVLINNAG  157 (249)
Q Consensus       148 ~id~linnag  157 (249)
                      +.+.+|...+
T Consensus        62 ~a~~vv~~~~   71 (116)
T PF02254_consen   62 KADAVVILTD   71 (116)
T ss_dssp             CESEEEEESS
T ss_pred             ccCEEEEccC
Confidence            5677766544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK04148 hypothetical protein; Provisional

Probab=96.67  E-value=0.0074  Score=45.47  Aligned_cols=56  Identities=25%  Similarity=0.313  Sum_probs=43.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD  133 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  133 (249)
                      +++.+++.|.+  .|.++|..|++.|++|+.+|.+++..+..    ++        ..+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a----~~--------~~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKA----KK--------LGLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHH----HH--------hCCeEEECcCCCCC
Confidence            45779999987  78888999999999999999998754443    22        13577888988765

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.67  E-value=0.0053  Score=56.37  Aligned_cols=46  Identities=28%  Similarity=0.503  Sum_probs=39.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~  108 (249)
                      ++++++++|+|+ ||+|++++..|++.|++|++++|+.++.++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            467899999996 6999999999999999999999998777665443

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.66  E-value=0.011  Score=53.54  Aligned_cols=46  Identities=30%  Similarity=0.538  Sum_probs=39.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQK  108 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~  108 (249)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+++++++..++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            467899999987 8999999999999998 899999998877665544

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.66  E-value=0.033  Score=48.21  Aligned_cols=118  Identities=14%  Similarity=0.199  Sum_probs=68.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCC-CHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLL-SLDSVVRFSEA  141 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~  141 (249)
                      .+.|+|++|.+|..++..|+..|.  .|++++|++  ++++....++.+.....+  ....   ...+ |.+       .
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~--~~~~---i~~~~d~~-------~   69 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAG--IDAE---IKISSDLS-------D   69 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccC--CCcE---EEECCCHH-------H
Confidence            589999999999999999999986  499999954  555555444443211111  0111   1111 111       1


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                          ..+-|++|.++|....   .+.+.   ...++.|..-...+.+.+.+..   ..+.+|++++..
T Consensus        70 ----l~~aDiViitag~p~~---~~~~r---~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~npv  124 (309)
T cd05294          70 ----VAGSDIVIITAGVPRK---EGMSR---LDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTNPV  124 (309)
T ss_pred             ----hCCCCEEEEecCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCch
Confidence                1368999999998532   12232   2344555544444444433332   346788888743

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.65  E-value=0.014  Score=49.75  Aligned_cols=42  Identities=19%  Similarity=0.323  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ++++++|+|+++++|.+++..+...|++|++++++.++.+..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            468999999999999999999999999999999887665443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.65  E-value=0.023  Score=44.91  Aligned_cols=31  Identities=29%  Similarity=0.481  Sum_probs=27.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRNL   99 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~   99 (249)
                      |+|.|+ ||+|..+++.|++.|. ++.++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            678885 7999999999999999 699998864

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.62  E-value=0.0079  Score=51.86  Aligned_cols=42  Identities=17%  Similarity=0.226  Sum_probs=36.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +|.+++|+||++++|..++..+...|++|+.++++.++.+..
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999888888999999999887665433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=96.62  E-value=0.0064  Score=47.81  Aligned_cols=120  Identities=15%  Similarity=0.094  Sum_probs=72.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..++++.++|.||+|-.|..+.+++++.+-  +|+++.|++....++             ...+.....|.+..+   +.
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------------~k~v~q~~vDf~Kl~---~~   77 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------------DKVVAQVEVDFSKLS---QL   77 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------------cceeeeEEechHHHH---HH
Confidence            456778899999999999999999999974  799999885322222             123445555665443   33


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      +..    ...+|+++++-|......-       .+..+.+..--.+.+++++    ++.+-.+++.+||..+.
T Consensus        78 a~~----~qg~dV~FcaLgTTRgkaG-------adgfykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd  135 (238)
T KOG4039|consen   78 ATN----EQGPDVLFCALGTTRGKAG-------ADGFYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGAD  135 (238)
T ss_pred             Hhh----hcCCceEEEeecccccccc-------cCceEeechHHHHHHHHHH----HhCCCeEEEEEeccCCC
Confidence            333    2479999999886432110       1111222222223334433    33444578889987654

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.61  E-value=0.012  Score=53.15  Aligned_cols=46  Identities=20%  Similarity=0.474  Sum_probs=39.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~  108 (249)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.+++++..++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            477899999997 899999999999999 6899999998776655543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.59  E-value=0.013  Score=44.63  Aligned_cols=30  Identities=33%  Similarity=0.571  Sum_probs=26.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      ++|.|+ ||+|.++++.|++.|. ++.++|.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            788886 8999999999999998 78888754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.55  E-value=0.015  Score=49.00  Aligned_cols=78  Identities=15%  Similarity=0.138  Sum_probs=54.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC----CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           68 CIVTGSTSGIGREIARQLAESG----AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G----~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +.|.||+|.+|..++..|+..|    .+|+++|+++++++....++.+..... ...++.  .  -+|   ..+.     
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~--~--~~d---~~~~-----   67 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVS--I--TDD---PYEA-----   67 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEE--E--CCc---hHHH-----
Confidence            4689998899999999999999    689999999988888888776643221 011111  1  112   1111     


Q ss_pred             ccCCCccEEEeccccCC
Q 025705          144 GRLGPLHVLINNAGIFS  160 (249)
Q Consensus       144 ~~~g~id~linnag~~~  160 (249)
                        +.+-|++|..+|...
T Consensus        68 --~~~aDiVv~t~~~~~   82 (263)
T cd00650          68 --FKDADVVIITAGVGR   82 (263)
T ss_pred             --hCCCCEEEECCCCCC
Confidence              236899999999753

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.55  E-value=0.017  Score=49.83  Aligned_cols=41  Identities=17%  Similarity=0.162  Sum_probs=35.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE  104 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~  104 (249)
                      .+.+++|.|+++++|.+++..+...|++|+.++++.++.+.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~  185 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW  185 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999988765443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.55  E-value=0.011  Score=50.58  Aligned_cols=38  Identities=18%  Similarity=0.293  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      .+++||.++|.|+++-.|+.++..|.++|+.|.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            36889999999999889999999999999999888874

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.54  E-value=0.016  Score=49.93  Aligned_cols=41  Identities=24%  Similarity=0.333  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAA  102 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~  102 (249)
                      .++.+++++|.|. |++|+.++..|.+.|++|.+++|+++..
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            3567899999997 6799999999999999999999997653

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.51  E-value=0.016  Score=52.71  Aligned_cols=59  Identities=17%  Similarity=0.249  Sum_probs=43.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      +++|.|+ |.+|.++++.|.++|+.|++++++++..++..++           ..+.++.+|.++.+.+++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----------~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----------LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----------cCEEEEEeCCCCHHHHHH
Confidence            5788887 8999999999999999999999998876554321           124555566666554433

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.50  E-value=0.047  Score=42.53  Aligned_cols=90  Identities=20%  Similarity=0.167  Sum_probs=55.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCC-CCCCceEEEEccCCCHHHHHHHHHH--Hh
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK-GLPLNIEAMELDLLSLDSVVRFSEA--WN  143 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~--~~  143 (249)
                      ++-+.|- |-+|..+|+.|++.|++|.+.+|++++.++..++-.....+. ....+..++..=+.+.+.+++++..  +.
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~   81 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL   81 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence            4666776 689999999999999999999999988777654310000000 0001234555567788888888887  66


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      ....+=+++|++..
T Consensus        82 ~~l~~g~iiid~sT   95 (163)
T PF03446_consen   82 AGLRPGKIIIDMST   95 (163)
T ss_dssp             GGS-TTEEEEE-SS
T ss_pred             hccccceEEEecCC
Confidence            55444456665543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.50  E-value=0.023  Score=45.96  Aligned_cols=36  Identities=19%  Similarity=0.438  Sum_probs=29.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      .+++.+|+|.|++ |+|.++++.|+..|. ++.++|.+
T Consensus        16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            3556789999776 599999999999998 68888754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.49  E-value=0.024  Score=49.50  Aligned_cols=76  Identities=16%  Similarity=0.187  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++++.. +++.         .. .+  .|..+. ++.+    .
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lG---------a~-~v--i~~~~~-~~~~----~  229 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMG---------AD-KL--VNPQND-DLDH----Y  229 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcC---------Cc-EE--ecCCcc-cHHH----H
Confidence            5889999986 8999999988888899 688899988776433 2221         11 11  243332 2222    2


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      .+..+.+|++|.++|.
T Consensus       230 ~~~~g~~D~vid~~G~  245 (343)
T PRK09880        230 KAEKGYFDVSFEVSGH  245 (343)
T ss_pred             hccCCCCCEEEECCCC
Confidence            2223569999999884

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.46  E-value=0.018  Score=49.89  Aligned_cols=45  Identities=27%  Similarity=0.474  Sum_probs=38.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQK  108 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~  108 (249)
                      +.+++++|.|+ |.+|..+++.|...|. +|++++|++++.++.+++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~  221 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE  221 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence            67899999988 8999999999998775 789999998877666554

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.45  E-value=0.02  Score=49.86  Aligned_cols=116  Identities=9%  Similarity=-0.032  Sum_probs=69.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcChHH--HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNLKA--ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +.+.|+|++|.+|..+|..|+.+|.       +++++|.+++.  ++..+-++........  .++.+.   -.+.    
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~--~~~~i~---~~~~----   73 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLL--AEIVIT---DDPN----   73 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhcccccc--CceEEe---cCcH----
Confidence            4789999999999999999998886       69999995433  5555555544210000  111111   1111    


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNS  207 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS  207 (249)
                         +.    ..+-|++|.+||....   ...+.   .+.+..|.    .+.+.+.+.+.+..  .+.++++|-
T Consensus        74 ---~~----~~daDivvitaG~~~k---~g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  129 (322)
T cd01338          74 ---VA----FKDADWALLVGAKPRG---PGMER---ADLLKANG----KIFTAQGKALNDVASRDVKVLVVGN  129 (322)
T ss_pred             ---HH----hCCCCEEEEeCCCCCC---CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecC
Confidence               11    2368999999998532   12232   23455554    45566666666544  466666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.44  E-value=0.061  Score=44.06  Aligned_cols=43  Identities=30%  Similarity=0.475  Sum_probs=37.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~  109 (249)
                      .+.|.||+|.+|.+++..|++.|++|.+.+|++++.++..++.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4789999999999999999999999999999988877665544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PLN00203 glutamyl-tRNA reductase

Probab=96.41  E-value=0.017  Score=53.52  Aligned_cols=47  Identities=17%  Similarity=0.381  Sum_probs=40.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~  109 (249)
                      ++.++.++|.|+ |++|..+++.|...|+ +|+++.|+.++.+...+++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            377899999999 8999999999999997 7999999988877765543

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.40  E-value=0.03  Score=48.42  Aligned_cols=30  Identities=27%  Similarity=0.504  Sum_probs=26.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      |+|.|+ ||+|-++++.|+..|. ++.++|.+
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            788886 7999999999999998 78888753

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.38  E-value=0.014  Score=46.48  Aligned_cols=45  Identities=24%  Similarity=0.321  Sum_probs=37.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHh
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE  112 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~  112 (249)
                      +|.|.|+ |-+|+.+|..++..|++|.+++++++.+++..+.+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~   45 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERL   45 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHH
Confidence            3678888 89999999999999999999999999888877777663

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.30  E-value=0.026  Score=49.11  Aligned_cols=78  Identities=17%  Similarity=0.071  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|.+++|+|+ +++|...+..+...|++ |+++++++++.+.. .++.         .. .  ..|..+.+ .+++.+..
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~g---------a~-~--~i~~~~~~-~~~~~~~~  227 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALG---------AD-F--VINSGQDD-VQEIRELT  227 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhC---------CC-E--EEcCCcch-HHHHHHHh
Confidence            4889999986 89999999998899998 99998887765433 2221         11 1  12444433 33332222


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                       .. .++|++|.+.|.
T Consensus       228 -~~-~~~d~vid~~g~  241 (339)
T cd08239         228 -SG-AGADVAIECSGN  241 (339)
T ss_pred             -CC-CCCCEEEECCCC
Confidence             11 259999998874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.30  E-value=0.028  Score=41.81  Aligned_cols=76  Identities=22%  Similarity=0.323  Sum_probs=54.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-cCCEEEE-EEcCh----------------------HHHHHHHHHHHHhhcCCCCCCce
Q 025705           67 TCIVTGSTSGIGREIARQLAE-SGAHVVM-AVRNL----------------------KAANELIQKWQEEWSGKGLPLNI  122 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~-~G~~Vil-~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~v  122 (249)
                      .+.|.|++|-+|+.+++.+.+ .+++++. ++|++                      +.+++..++           .+ 
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----------~D-   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----------AD-   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------------S-
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----------CC-
Confidence            489999999999999999999 6888664 56665                      223333221           11 


Q ss_pred             EEEEccCCCHHHHHHHHHHHhccCCCccEEEecccc
Q 025705          123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       123 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~  158 (249)
                        +..|+|.++.+...++...+.  ++.+++-..|.
T Consensus        70 --VvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   70 --VVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             --EEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             --EEEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence              456999999999999888876  78888888776

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.29  E-value=0.032  Score=47.88  Aligned_cols=80  Identities=24%  Similarity=0.285  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+.+++|+|+++++|..++..+...|++|+.++++.++.+.. +++       +  .. .+  .|..+.+..+.+.+.. 
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-------g--~~-~~--~~~~~~~~~~~~~~~~-  207 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-------G--AD-VA--VDYTRPDWPDQVREAL-  207 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-------C--CC-EE--EecCCccHHHHHHHHc-
Confidence            468899999999999999999999999999999887765433 221       1  11 11  2333433333332222 


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      . ..++|+++++.|.
T Consensus       208 ~-~~~~d~vl~~~g~  221 (324)
T cd08244         208 G-GGGVTVVLDGVGG  221 (324)
T ss_pred             C-CCCceEEEECCCh
Confidence            1 1259999998763

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK08223 hypothetical protein; Validated

Probab=96.25  E-value=0.041  Score=46.94  Aligned_cols=37  Identities=19%  Similarity=0.240  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      ..+++.+|+|.|++ |+|..+++.|++.|. ++.++|.+
T Consensus        23 ~kL~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         23 QRLRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHHhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCC
Confidence            34667889999876 999999999999998 78888865

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.23  E-value=0.056  Score=47.99  Aligned_cols=37  Identities=19%  Similarity=0.418  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      ..+.+.+|+|.|++ |+|..+++.|++.|. ++.++|.+
T Consensus        37 ~~l~~~~VliiG~G-glG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGAG-GLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence            34667889999875 999999999999998 89998864

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.23  E-value=0.15  Score=44.25  Aligned_cols=115  Identities=17%  Similarity=0.068  Sum_probs=70.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ..+.|+|+ |.+|.++|..|+..|.  +++++|.+++.++..+.++....+-..   ...+...  +|.+.         
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~---~~~v~~~--~dy~~---------   68 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLK---NPKIEAD--KDYSV---------   68 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCC---CCEEEEC--CCHHH---------
Confidence            46899996 9999999999998875  799999999888888777776432111   1122211  12221         


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                        +.+-|++|.+||....   ...+.   ...+..|.-    +.+.+.+.+.+.. .+.++++|-
T Consensus        69 --~~~adivvitaG~~~k---~g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          69 --TANSKVVIVTAGARQN---EGESR---LDLVQRNVD----IFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             --hCCCCEEEECCCCCCC---CCCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEccC
Confidence              1368999999997532   12333   234444543    3444444444432 456666664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.22  E-value=0.072  Score=46.34  Aligned_cols=42  Identities=14%  Similarity=0.116  Sum_probs=35.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELI  106 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~  106 (249)
                      +.+.+.|+|| |.+|..++..++..| +.|+++|++++.++...
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~   46 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKA   46 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHH
Confidence            4567999997 889999999999999 68999999987665433

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.21  E-value=0.065  Score=44.67  Aligned_cols=36  Identities=17%  Similarity=0.357  Sum_probs=30.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      .+++.+|+|.|++ |+|..+++.|++.|. ++.++|.+
T Consensus        21 ~L~~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4667888888765 999999999999998 78888865

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.18  E-value=0.051  Score=59.03  Aligned_cols=140  Identities=13%  Similarity=0.125  Sum_probs=88.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .++.++|++.+++++.+++.+|.++|+.|+++..... .......         ....+..+...-.|.+.+..+++.+.
T Consensus      1754 ~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 1823 (2582)
T TIGR02813      1754 SGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASP---------LASAIASVTLGTIDDTSIEAVIKDIE 1823 (2582)
T ss_pred             cCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-ccccccc---------cccccccccccccchHHHHHHHHhhh
Confidence            4778888888999999999999999999887642211 0000000         01123334455556677888888887


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      ...++++.+||-.+.... .....+.......-...+...|.+.|.+.+.+...+++.++.++...|-+|.
T Consensus      1824 ~~~~~~~g~i~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~ 1893 (2582)
T TIGR02813      1824 EKTAQIDGFIHLQPQHKS-VADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGY 1893 (2582)
T ss_pred             ccccccceEEEecccccc-ccccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCcccc
Confidence            777889999997774421 0000000011111123345578888887777666667889999998877775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.14  E-value=0.063  Score=46.76  Aligned_cols=115  Identities=12%  Similarity=0.014  Sum_probs=68.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .+.|+|++|.+|.++|..|+.+|.       +++++|.++  ++++..+.++........  ..+.+. .  .+.     
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~--~~~~i~-~--~~~-----   74 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLL--AGVVAT-T--DPE-----   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccccc--CCcEEe-c--ChH-----
Confidence            589999999999999999998884       699999965  446666666655321100  011111 0  111     


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNS  207 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS  207 (249)
                        +.    ..+-|++|..||.... +  ..+   -...++.|..    +.+.+.+.+.+..  .+.|+++|-
T Consensus        75 --~~----~~daDvVVitAG~~~k-~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        75 --EA----FKDVDAALLVGAFPRK-P--GME---RADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             --HH----hCCCCEEEEeCCCCCC-C--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence              11    2367999999997532 1  223   3345556644    4455555555542  456666653

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.13  E-value=0.056  Score=49.60  Aligned_cols=77  Identities=16%  Similarity=0.053  Sum_probs=50.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH-HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++++.|+|.|+ |++|.++|+.|.++|++|.+++++.. ......+.+++.        .+.++..+-..         
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--------gv~~~~~~~~~---------   74 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--------GATVRLGPGPT---------   74 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--------CCEEEECCCcc---------
Confidence            456789999997 67999999999999999999986653 233333444431        23333322111         


Q ss_pred             HHhccCCCccEEEeccccCC
Q 025705          141 AWNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~  160 (249)
                          .....|.+|...|+..
T Consensus        75 ----~~~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         75 ----LPEDTDLVVTSPGWRP   90 (480)
T ss_pred             ----ccCCCCEEEECCCcCC
Confidence                0125799999999853

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.13  E-value=0.029  Score=47.50  Aligned_cols=38  Identities=26%  Similarity=0.344  Sum_probs=31.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      ...+.+.+|+|.|++ |+|..+|+.|++.|. ++.++|.+
T Consensus        25 ~~kL~~s~VlVvG~G-GVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         25 LQLFADAHICVVGIG-GVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHHhcCCCEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence            445677889999765 999999999999995 88888754

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.12  E-value=0.047  Score=46.83  Aligned_cols=42  Identities=24%  Similarity=0.254  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .|.+++|.|+++++|.+++..+...|++++.+.++.++.+..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            578999999999999999999999999999988887654433

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.11  E-value=0.0035  Score=45.11  Aligned_cols=37  Identities=24%  Similarity=0.376  Sum_probs=32.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +++|+.++|.|| |.+|..-++.|++.|++|.+++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            578999999999 7999999999999999999999885

>PRK05442 malate dehydrogenase; Provisional

Probab=96.10  E-value=0.043  Score=47.89  Aligned_cols=116  Identities=9%  Similarity=-0.007  Sum_probs=68.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcChH--HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNLK--AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      ..+.|+|++|.+|..+|..|+..|.       +++++|.+++  +++..+-++........  .++.+. .  .+.    
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~--~~~~i~-~--~~y----   75 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLL--AGVVIT-D--DPN----   75 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhc--CCcEEe-c--ChH----
Confidence            4689999999999999999998764       6999998543  35555555544221100  011111 0  111    


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc-C-CCCeEEEEcC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-G-SPSRIINVNS  207 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-~-~~g~Iv~vsS  207 (249)
                         +    .+.+-|++|..||.... +  ..+   -.+.++.|.    .+.+.+.+.+.+ . ..+.++++|-
T Consensus        76 ---~----~~~daDiVVitaG~~~k-~--g~t---R~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         76 ---V----AFKDADVALLVGARPRG-P--GME---RKDLLEANG----AIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             ---H----HhCCCCEEEEeCCCCCC-C--CCc---HHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence               1    12468999999997532 1  222   334455554    455666666666 3 2566777664

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.10  E-value=0.035  Score=46.98  Aligned_cols=87  Identities=21%  Similarity=0.303  Sum_probs=57.7

Q ss_pred             CEEEEeCCCCchHHH--HHHHHHHcCCEEEEEEc-------ChH----HHHHHHHHHHHhhcCCCCCCceEEEEccCCCH
Q 025705           66 LTCIVTGSTSGIGRE--IARQLAESGAHVVMAVR-------NLK----AANELIQKWQEEWSGKGLPLNIEAMELDLLSL  132 (249)
Q Consensus        66 ~~vlItGas~gIG~~--ia~~l~~~G~~Vil~~r-------~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  132 (249)
                      |.|||.|+|+|.|.+  |+..|- .|++-+-+..       ++-    -.....++..+   ..+  ....-+..|.-+.
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~---~kG--lyAksingDaFS~  115 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAK---QKG--LYAKSINGDAFSD  115 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHH---hcC--ceeeecccchhhH
Confidence            789999999999987  444444 5666555432       110    01112222222   222  3455667898888


Q ss_pred             HHHHHHHHHHhccCCCccEEEecccc
Q 025705          133 DSVVRFSEAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       133 ~~v~~~~~~~~~~~g~id~linnag~  158 (249)
                      +--+.+++.+++.+|++|.+|+.-+.
T Consensus       116 e~k~kvIe~Ik~~~g~vDlvvYSlAs  141 (398)
T COG3007         116 EMKQKVIEAIKQDFGKVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHHHHHhhccccEEEEeccC
Confidence            88888999999999999999987654

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.09  E-value=0.041  Score=44.64  Aligned_cols=37  Identities=22%  Similarity=0.383  Sum_probs=33.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +++||.++|.|| |.+|...++.|.+.|++|.++++..
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            688999999998 6899999999999999999998764

>PLN02602 lactate dehydrogenase

Probab=96.08  E-value=0.16  Score=44.83  Aligned_cols=115  Identities=17%  Similarity=0.115  Sum_probs=70.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +.+.|+|+ |.+|.++|..++.+|.  +++++|.+++.++..+-++.....-.   ....+.. + .+.+       .+ 
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~---~~~~i~~-~-~dy~-------~~-  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFL---PRTKILA-S-TDYA-------VT-  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcC---CCCEEEe-C-CCHH-------Hh-
Confidence            68999996 8999999999998875  79999999988888887777643211   1122211 1 1211       11 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                         .+-|++|..||.... +  ..+.   ...+..|.    .+.+.+.+.+.+.. .+.+++++-
T Consensus       104 ---~daDiVVitAG~~~k-~--g~tR---~dll~~N~----~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        104 ---AGSDLCIVTAGARQI-P--GESR---LNLLQRNV----ALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             ---CCCCEEEECCCCCCC-c--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence               368999999998532 1  2232   23344443    34444444444432 456666664

>PRK08328 hypothetical protein; Provisional

Probab=96.08  E-value=0.096  Score=43.38  Aligned_cols=38  Identities=21%  Similarity=0.386  Sum_probs=31.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL   99 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~   99 (249)
                      ..+++++|+|.|++ |+|.++++.|++.|. ++.++|.+.
T Consensus        23 ~~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         23 EKLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            34567889999876 999999999999998 788888653

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.08  E-value=0.073  Score=46.62  Aligned_cols=42  Identities=21%  Similarity=0.255  Sum_probs=36.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ..|.+|+|.|+ +++|...+..+...|++|+++++++++++..
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            35789999999 9999999998888999999999988776543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.07  E-value=0.033  Score=50.58  Aligned_cols=64  Identities=20%  Similarity=0.224  Sum_probs=47.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ...++++|.|+ |.+|+.+++.|.+.|.+|++++++++..+...++.          ..+.++.+|.++.+.+++
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----------~~~~~i~gd~~~~~~L~~  292 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----------PNTLVLHGDGTDQELLEE  292 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----------CCCeEEECCCCCHHHHHh
Confidence            45688999999 89999999999999999999999987665543321          124456667776665543

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.05  E-value=0.068  Score=47.26  Aligned_cols=79  Identities=14%  Similarity=0.083  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~  141 (249)
                      .|.+++|+|+ +++|...+..+...|+ +|+.++++.++++.. +++.         .. .  ..|..+ .+.+.+.+.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~G---------a~-~--~i~~~~~~~~~~~~v~~  250 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLG---------AT-D--CVNPNDYDKPIQEVIVE  250 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhC---------CC-e--EEcccccchhHHHHHHH
Confidence            4789999985 8999999888888899 799999988765544 2211         11 1  123332 2233333333


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +.+|++|.++|.
T Consensus       251 ~~~--~g~d~vid~~G~  265 (368)
T TIGR02818       251 ITD--GGVDYSFECIGN  265 (368)
T ss_pred             HhC--CCCCEEEECCCC
Confidence            332  369999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.05  E-value=0.05  Score=46.29  Aligned_cols=81  Identities=12%  Similarity=0.117  Sum_probs=55.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|++++|.||+|..|.-.-+.-.-.|++|+..+-+.++..-...+    ..-        -..+|..++.++.+++++..
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~----~G~--------d~afNYK~e~~~~~aL~r~~  220 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTK----FGF--------DDAFNYKEESDLSAALKRCF  220 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhc----cCC--------ccceeccCccCHHHHHHHhC
Confidence            469999999999999755444445699999988887765433222    110        11346666667777777653


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .+  .||+-+-|+|.
T Consensus       221 P~--GIDiYfeNVGG  233 (343)
T KOG1196|consen  221 PE--GIDIYFENVGG  233 (343)
T ss_pred             CC--cceEEEeccCc
Confidence            32  69999999995

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.04  E-value=0.085  Score=43.78  Aligned_cols=30  Identities=27%  Similarity=0.479  Sum_probs=25.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      |+|.| .||+|-++++.|+..|. ++.++|.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            67777 66999999999999998 78888864

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.01  E-value=0.03  Score=47.69  Aligned_cols=80  Identities=14%  Similarity=0.119  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|++|++..|.-....-.-+|++|+-++-+.++..-..+++.-          .  .-.|...+ ++.+.+.+..
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf----------D--~~idyk~~-d~~~~L~~a~  216 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF----------D--AGIDYKAE-DFAQALKEAC  216 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC----------c--eeeecCcc-cHHHHHHHHC
Confidence            489999999999999876665556899999999888776555433211          0  12355555 3333333332


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      -  ..||+.+-|+|.
T Consensus       217 P--~GIDvyfeNVGg  229 (340)
T COG2130         217 P--KGIDVYFENVGG  229 (340)
T ss_pred             C--CCeEEEEEcCCc
Confidence            1  259999999995

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.99  E-value=0.035  Score=50.07  Aligned_cols=41  Identities=22%  Similarity=0.321  Sum_probs=36.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .+.|++++|.|. |.||+.+|..+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            367999999997 58999999999999999999999876643

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.98  E-value=0.082  Score=47.12  Aligned_cols=116  Identities=9%  Similarity=0.029  Sum_probs=71.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-E----EEE----EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-H----VVM----AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~----Vil----~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      -.|.|+|++|.+|.++|..++.+|. +    |.+    ++++.++++..+-++.+......  .++.+..   .+.+   
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~--~~v~i~~---~~y~---  116 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLL--REVSIGI---DPYE---  116 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhc--CceEEec---CCHH---
Confidence            4699999999999999999998875 4    444    48899998888888877431110  1222111   1211   


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc-C-CCCeEEEEcC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-G-SPSRIINVNS  207 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-~-~~g~Iv~vsS  207 (249)
                          .    +.+-|++|..||.... +  ..+   -...++.|.    .+.+.+.+.+.+ . ..+.||++|-
T Consensus       117 ----~----~kdaDIVVitAG~prk-p--g~t---R~dll~~N~----~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       117 ----V----FEDADWALLIGAKPRG-P--GME---RADLLDING----QIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             ----H----hCCCCEEEECCCCCCC-C--CCC---HHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEcCC
Confidence                1    2368999999998532 1  222   234455554    355555555555 3 3456666664

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.96  E-value=0.074  Score=42.91  Aligned_cols=37  Identities=24%  Similarity=0.409  Sum_probs=30.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      ..+++++|+|.|+ +|+|.++++.|+..|. ++.++|.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            3456688999975 5699999999999998 68888753

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.96  E-value=0.066  Score=46.21  Aligned_cols=115  Identities=14%  Similarity=0.153  Sum_probs=68.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .|.|+|+ |++|.++|..|+.++.  +++++|.+++.++..+-++........  .+ ..+..| .+.++          
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~--~~-~~i~~~-~~y~~----------   66 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLG--SD-VKITGD-GDYED----------   66 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhcc--Cc-eEEecC-CChhh----------
Confidence            5889999 9999999999988875  799999997777777666665322111  11 111222 11111          


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                       +.+-|++|..||......   ++.   ...++.|..-.-.+.+.    +.+.. .+.++.++-
T Consensus        67 -~~~aDiVvitAG~prKpG---mtR---~DLl~~Na~I~~~i~~~----i~~~~~d~ivlVvtN  119 (313)
T COG0039          67 -LKGADIVVITAGVPRKPG---MTR---LDLLEKNAKIVKDIAKA----IAKYAPDAIVLVVTN  119 (313)
T ss_pred             -hcCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHH----HHhhCCCeEEEEecC
Confidence             136899999999864211   222   34455665433334444    34333 245555543

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.94  E-value=0.052  Score=47.94  Aligned_cols=79  Identities=14%  Similarity=0.174  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~  141 (249)
                      .|.+++|.|+ +++|...+..+...|+ +|+.++++.++++.. +++       +  .. .+  .|..+. +++.+.+.+
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-------G--a~-~~--i~~~~~~~~~~~~v~~  251 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-------G--AT-DC--VNPKDHDKPIQQVLVE  251 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-------C--CC-EE--EcccccchHHHHHHHH
Confidence            5789999985 8999999998889999 699999998776533 221       1  11 11  243332 234444444


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +++|++|.+.|.
T Consensus       252 ~~~--~g~d~vid~~g~  266 (368)
T cd08300         252 MTD--GGVDYTFECIGN  266 (368)
T ss_pred             HhC--CCCcEEEECCCC
Confidence            433  369999999874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.92  E-value=0.036  Score=55.22  Aligned_cols=77  Identities=25%  Similarity=0.341  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CE-------------EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccC
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESG-AH-------------VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL  129 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G-~~-------------Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  129 (249)
                      +.|.|+|.|+ |.+|+..|+.|++.. +.             |.+.+++.+.+++..+..          .++..+..|+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----------~~~~~v~lDv  636 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----------ENAEAVQLDV  636 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----------CCCceEEeec
Confidence            3578999997 899999999999753 33             788899987776655432          1356788999


Q ss_pred             CCHHHHHHHHHHHhccCCCccEEEecccc
Q 025705          130 LSLDSVVRFSEAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       130 ~~~~~v~~~~~~~~~~~g~id~linnag~  158 (249)
                      +|.+++.++++       ++|++|++...
T Consensus       637 ~D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        637 SDSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             CCHHHHHHhhc-------CCCEEEECCCc
Confidence            99988766544       48999999875

>PLN02740 Alcohol dehydrogenase-like

Probab=95.92  E-value=0.065  Score=47.59  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=52.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~  140 (249)
                      ..|++|+|.|+ +++|...+..+...|+ +|+.+++++++++... ++       +  .. .+  .|..+. +...+.+.
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-------G--a~-~~--i~~~~~~~~~~~~v~  262 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-------G--IT-DF--INPKDSDKPVHERIR  262 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-------C--Cc-EE--EecccccchHHHHHH
Confidence            35789999985 8999999998888999 6999999887765442 21       1  11 12  233332 12333334


Q ss_pred             HHhccCCCccEEEecccc
Q 025705          141 AWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       141 ~~~~~~g~id~linnag~  158 (249)
                      ++..  +.+|++|.++|.
T Consensus       263 ~~~~--~g~dvvid~~G~  278 (381)
T PLN02740        263 EMTG--GGVDYSFECAGN  278 (381)
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3332  269999999884

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.91  E-value=0.12  Score=44.63  Aligned_cols=116  Identities=16%  Similarity=0.122  Sum_probs=71.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           68 CIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      +.|.|+ |.+|..+|..|+.+|.  +++++|.+++.++..+.++.....-.. ..++.....|   .+       .+   
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~-~~~~~i~~~~---y~-------~~---   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTY-STNTKIRAGD---YD-------DC---   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCC-CCCEEEEECC---HH-------Hh---
Confidence            678898 8999999999998885  799999999888888877776332110 0123333222   22       22   


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcC
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNS  207 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS  207 (249)
                       .+-|++|..||.... +  ..+.+ -...++.|    ..+.+.+.+.+.+... |.++++|-
T Consensus        67 -~~aDivvitaG~~~k-p--g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          67 -ADADIIVITAGPSID-P--GNTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             -CCCCEEEECCCCCCC-C--CCCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecC
Confidence             368999999998532 1  22311 12334445    4456666666666543 44444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.90  E-value=0.082  Score=47.37  Aligned_cols=49  Identities=33%  Similarity=0.529  Sum_probs=42.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQ  110 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~  110 (249)
                      .++++++++|.|++ -+|.-+|+.|+++|. +|+++.|+.+++++.++++.
T Consensus       174 ~~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         174 GSLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            34789999999986 799999999999995 89999999999988877754

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.90  E-value=0.058  Score=45.80  Aligned_cols=41  Identities=22%  Similarity=0.281  Sum_probs=36.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE  104 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~  104 (249)
                      .+.+++|+|+++++|..++..+...|++|+.++++.++.+.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL  179 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999988765443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.88  E-value=0.074  Score=44.07  Aligned_cols=36  Identities=25%  Similarity=0.353  Sum_probs=30.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      .+++.+|+|.|.+ |+|..+++.|++.|. ++.++|.+
T Consensus         8 ~L~~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCC
Confidence            3556788998865 999999999999998 88888753

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.88  E-value=0.037  Score=48.55  Aligned_cols=35  Identities=29%  Similarity=0.230  Sum_probs=30.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      ..|++|+|+|+ |++|...+..+...|++|++++|+
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            35789999986 899999998888889999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.86  E-value=0.24  Score=42.66  Aligned_cols=112  Identities=13%  Similarity=0.077  Sum_probs=68.4

Q ss_pred             EEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           69 IVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        69 lItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .|.|+ |++|.++|..++.+|  .+++++|+++++++....++.+.....   ........  ++.+       .    .
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~---~~~~i~~~--~~~~-------~----l   64 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFL---ATGTIVRG--GDYA-------D----A   64 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhcccc---CCCeEEEC--CCHH-------H----h
Confidence            57786 579999999999998  579999999998888888887754321   12222221  1211       1    1


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcC
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNS  207 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS  207 (249)
                      .+-|++|.++|....   ...+.   ...+..|.-    +.+.+.+.+.+. ..|.++++|-
T Consensus        65 ~~aDiVIitag~p~~---~~~~R---~~l~~~n~~----i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          65 ADADIVVITAGAPRK---PGETR---LDLINRNAP----ILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CCCCEEEEcCCCCCC---CCCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccC
Confidence            368999999997532   12232   233444433    444444444443 2466766664

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.85  E-value=0.027  Score=42.87  Aligned_cols=43  Identities=16%  Similarity=0.186  Sum_probs=37.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .+++||.++|.|.+.-+|+.++..|.++|+.|.+++++...++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~   66 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ   66 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            3789999999999999999999999999999999886543333

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.85  E-value=0.41  Score=40.11  Aligned_cols=115  Identities=14%  Similarity=0.263  Sum_probs=77.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|.+|||--|.||+|..+++.+-..|++++.+..+.++.+...+.        +     .-+..|.+.++.++++.+-..
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken--------G-----~~h~I~y~~eD~v~~V~kiTn  212 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN--------G-----AEHPIDYSTEDYVDEVKKITN  212 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc--------C-----CcceeeccchhHHHHHHhccC
Confidence            578999999999999999999999999999988877665443221        1     123467777777766554432


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .+  ++|++.-..|..           .+..-               +..++  ..|.+|-.+-.++..+..++.+++
T Consensus       213 gK--GVd~vyDsvG~d-----------t~~~s---------------l~~Lk--~~G~mVSfG~asgl~~p~~l~~ls  260 (336)
T KOG1197|consen  213 GK--GVDAVYDSVGKD-----------TFAKS---------------LAALK--PMGKMVSFGNASGLIDPIPLNQLS  260 (336)
T ss_pred             CC--Cceeeeccccch-----------hhHHH---------------HHHhc--cCceEEEeccccCCCCCeehhhcC
Confidence            22  589888877742           11111               11122  247888888888888776655543

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.84  E-value=0.028  Score=47.71  Aligned_cols=43  Identities=28%  Similarity=0.471  Sum_probs=36.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQK  108 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~  108 (249)
                      ++.++|.|+ ||-+++++..|++.|+ +|.++.|+.++.++.+++
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            468999996 8999999999999998 699999999887766543

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.82  E-value=0.11  Score=46.44  Aligned_cols=81  Identities=17%  Similarity=0.160  Sum_probs=48.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEE-EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil-~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..|.+|+|. |+++||..++..+...|+++++ ++++.++++.. +++       +  ..    ..|..+.++..+.+.+
T Consensus       184 ~~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~-------G--a~----~v~~~~~~~~~~~v~~  248 (393)
T TIGR02819       184 GPGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSF-------G--CE----TVDLSKDATLPEQIEQ  248 (393)
T ss_pred             CCCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHc-------C--Ce----EEecCCcccHHHHHHH
Confidence            357889995 5689999999888889997554 45665554333 221       1  12    1233322223333333


Q ss_pred             HhccCCCccEEEeccccC
Q 025705          142 WNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       142 ~~~~~g~id~linnag~~  159 (249)
                      +... ..+|++|.++|..
T Consensus       249 ~~~~-~g~Dvvid~~G~~  265 (393)
T TIGR02819       249 ILGE-PEVDCAVDCVGFE  265 (393)
T ss_pred             HcCC-CCCcEEEECCCCc
Confidence            3221 2599999999964

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.81  E-value=0.074  Score=45.01  Aligned_cols=41  Identities=22%  Similarity=0.253  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE  104 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~  104 (249)
                      +|.+++|.|+++++|.+++..+...|++|+.+++++++.+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57899999999999999999999999999999888766543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.81  E-value=0.042  Score=47.39  Aligned_cols=40  Identities=23%  Similarity=0.298  Sum_probs=35.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      +|.+++|.|+++++|.+++......|++|+.+.++.++.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~  178 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE  178 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence            4789999999999999999988889999999988876544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.80  E-value=0.064  Score=45.96  Aligned_cols=41  Identities=17%  Similarity=0.147  Sum_probs=35.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      ..|.+++|.|+++++|.++++.+...|++|+.+.++.++.+
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~  177 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE  177 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHH
Confidence            35689999999999999999999999999999888876543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.80  E-value=0.09  Score=44.78  Aligned_cols=40  Identities=25%  Similarity=0.292  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .|.+++|.|+++++|.+++..+...|++|+.+.+++++.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  181 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA  181 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4689999999999999999999999999999988876543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14851 hypothetical protein; Provisional

Probab=95.78  E-value=0.098  Score=50.08  Aligned_cols=83  Identities=12%  Similarity=0.168  Sum_probs=53.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC-------------------hHHHHHHHHHHHHhhcCCCCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN-------------------LKAANELIQKWQEEWSGKGLPL  120 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~  120 (249)
                      ..+++.+|+|.| .||+|..+++.|++.|. ++.++|.+                   ..+.+...+.+.+.    +...
T Consensus        39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~i----nP~~  113 (679)
T PRK14851         39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSI----NPFL  113 (679)
T ss_pred             HHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHh----CCCC
Confidence            456778999998 56999999999999998 78888753                   12333333333332    2335


Q ss_pred             ceEEEEccCCCHHHHHHHHHHHhccCCCccEEEecc
Q 025705          121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNA  156 (249)
Q Consensus       121 ~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linna  156 (249)
                      ++..+...++ .+.+.++++       ++|++|.+.
T Consensus       114 ~I~~~~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        114 EITPFPAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             eEEEEecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            6677766665 334444433       467777553

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.78  E-value=0.42  Score=41.80  Aligned_cols=40  Identities=25%  Similarity=0.346  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA  101 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~  101 (249)
                      ..+.|+++.|.|. |.||+++|+.|...|++|+..+|++..
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            4689999999986 579999999999999999999998754

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.75  E-value=0.064  Score=42.46  Aligned_cols=47  Identities=28%  Similarity=0.345  Sum_probs=38.6

Q ss_pred             CCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           56 NPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        56 ~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .......+.|+++.|.|. |.||+++|+.+...|++|+.++|+.....
T Consensus        27 ~~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   27 ERFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             cCCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            345556889999999986 69999999999999999999999986543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.74  E-value=0.078  Score=45.91  Aligned_cols=117  Identities=11%  Similarity=0.083  Sum_probs=66.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|+|++|.+|.++|..|+.+|.  +++++|.+  +++..+-++..-.      ..+....+. .+ +++.   +    
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~------~~~~i~~~~-~~-~~~y---~----   64 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN------TPAKVTGYL-GP-EELK---K----   64 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC------CcceEEEec-CC-CchH---H----
Confidence            578999999999999999998884  79999988  4444444444311      011111110 00 0111   1    


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                      .+.+-|++|.+||.... +  ..+   -...++.|..-.-.+.+.+.++   ...+.|+++|--.
T Consensus        65 ~~~daDivvitaG~~~k-~--g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  120 (310)
T cd01337          65 ALKGADVVVIPAGVPRK-P--GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV  120 (310)
T ss_pred             hcCCCCEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence            12368999999998532 1  122   3445666655444444443333   2246777777643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.73  E-value=0.034  Score=47.41  Aligned_cols=39  Identities=18%  Similarity=0.319  Sum_probs=35.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      +++||.++|.|.|.-+|+.+|..|.++|+.|.++.++..
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~  193 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK  193 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence            689999999999999999999999999999999887643

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.70  E-value=0.076  Score=47.72  Aligned_cols=42  Identities=10%  Similarity=-0.008  Sum_probs=34.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA---HVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~---~Vil~~r~~~~~~~~  105 (249)
                      .|.+++|.|+++++|...+..+...|+   +|++++++.++++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            578999999999999998877666654   799999998876644

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.70  E-value=0.21  Score=42.99  Aligned_cols=45  Identities=18%  Similarity=0.115  Sum_probs=36.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQE  111 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~  111 (249)
                      +.+.|.|+ |.+|..+|..++..|. +|+++|++++.++....++.+
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~   48 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAE   48 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHh
Confidence            46889998 8899999999999875 999999988876655444433

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.68  E-value=0.06  Score=47.50  Aligned_cols=41  Identities=17%  Similarity=0.162  Sum_probs=32.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .|++|+|.|+ +++|...+..+...|++|++++.+.++..+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~  223 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA  223 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence            5789999775 8999999988888999998888776554333

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.68  E-value=0.11  Score=44.74  Aligned_cols=42  Identities=14%  Similarity=0.286  Sum_probs=35.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .|.+++|.|+++++|..++..+...|++++++.++.++.+..
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            468999999999999999999999999988888887654443

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.67  E-value=0.075  Score=43.88  Aligned_cols=74  Identities=22%  Similarity=0.179  Sum_probs=52.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.|+.+|=.|+++|   .+++-+|+.|++|..+|-+++..+....+..+    .+  ..     .|     .....++++
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e----~g--v~-----i~-----y~~~~~edl  118 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALE----SG--VN-----ID-----YRQATVEDL  118 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhh----cc--cc-----cc-----chhhhHHHH
Confidence            78999999999999   69999999999999999998777665544333    11  11     11     222334444


Q ss_pred             hccCCCccEEEec
Q 025705          143 NGRLGPLHVLINN  155 (249)
Q Consensus       143 ~~~~g~id~linn  155 (249)
                      .+..+++|++++.
T Consensus       119 ~~~~~~FDvV~cm  131 (243)
T COG2227         119 ASAGGQFDVVTCM  131 (243)
T ss_pred             HhcCCCccEEEEh
Confidence            4444688988876

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.65  E-value=0.078  Score=46.88  Aligned_cols=78  Identities=18%  Similarity=0.192  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|.|+ +++|...+..+...|+ +|+.+++++++++.. +++.         .. .  ..|..+.+..+++ .+.
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~G---------a~-~--~i~~~~~~~~~~i-~~~  255 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELG---------AT-A--TVNAGDPNAVEQV-REL  255 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcC---------Cc-e--EeCCCchhHHHHH-HHH
Confidence            4789999985 8999998888888899 688899888775433 2211         11 1  1344343333332 222


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  +.+|++|.++|.
T Consensus       256 ~~--~g~d~vid~~G~  269 (371)
T cd08281         256 TG--GGVDYAFEMAGS  269 (371)
T ss_pred             hC--CCCCEEEECCCC
Confidence            22  269999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.62  E-value=0.12  Score=45.66  Aligned_cols=79  Identities=16%  Similarity=0.201  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~  141 (249)
                      .|.+|+|.|+ +++|...+..+...|+ +|+.++++.++.+.. +++.         .. .+  .|..+. +.+.+.+.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~G---------a~-~~--i~~~~~~~~~~~~v~~  252 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFG---------VT-EF--VNPKDHDKPVQEVIAE  252 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcC---------Cc-eE--EcccccchhHHHHHHH
Confidence            5789999985 8999999888888899 799999987765433 2211         11 11  233321 234444444


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +.+|+++.+.|.
T Consensus       253 ~~~--~~~d~vid~~G~  267 (369)
T cd08301         253 MTG--GGVDYSFECTGN  267 (369)
T ss_pred             HhC--CCCCEEEECCCC
Confidence            433  269999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.60  E-value=0.068  Score=45.95  Aligned_cols=42  Identities=33%  Similarity=0.415  Sum_probs=36.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .+++++|.|+++++|..++..+...|++|+.+++++++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            357999999999999999999999999999999987765444

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.57  E-value=0.073  Score=46.79  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|.+++|.|+ +++|...+..+...|++ |+.++++.++.+.. +++       +  .. .+  .|..+.+..+++ .+.
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~-------G--a~-~~--i~~~~~~~~~~i-~~~  240 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF-------G--AT-HT--VNSSGTDPVEAI-RAL  240 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-------C--Cc-eE--EcCCCcCHHHHH-HHH
Confidence            4789999985 89999998888888995 88888887765444 221       1  11 11  244333333332 222


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ... .++|++|.++|.
T Consensus       241 ~~~-~g~d~vid~~g~  255 (358)
T TIGR03451       241 TGG-FGADVVIDAVGR  255 (358)
T ss_pred             hCC-CCCCEEEECCCC
Confidence            211 258999999884

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.57  E-value=0.071  Score=46.02  Aligned_cols=41  Identities=24%  Similarity=0.360  Sum_probs=32.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +.+++++||++++|...+......|++|+.+++++++.+..
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~  184 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL  184 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            34555569999999999887778899999999887665443

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.53  E-value=0.057  Score=50.62  Aligned_cols=71  Identities=17%  Similarity=0.161  Sum_probs=51.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      .+++|.|++ .+|+.++++|.++|.++++++.++++.++..    +        .....+.+|.+|++..+++-      
T Consensus       418 ~hiiI~G~G-~~G~~la~~L~~~g~~vvvId~d~~~~~~~~----~--------~g~~~i~GD~~~~~~L~~a~------  478 (558)
T PRK10669        418 NHALLVGYG-RVGSLLGEKLLAAGIPLVVIETSRTRVDELR----E--------RGIRAVLGNAANEEIMQLAH------  478 (558)
T ss_pred             CCEEEECCC-hHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----H--------CCCeEEEcCCCCHHHHHhcC------
Confidence            456666654 7999999999999999999999987655442    2        14678889999988766531      


Q ss_pred             CCCccEEEec
Q 025705          146 LGPLHVLINN  155 (249)
Q Consensus       146 ~g~id~linn  155 (249)
                      ..+.|.++-+
T Consensus       479 i~~a~~viv~  488 (558)
T PRK10669        479 LDCARWLLLT  488 (558)
T ss_pred             ccccCEEEEE
Confidence            1245655544

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.53  E-value=0.14  Score=44.83  Aligned_cols=39  Identities=18%  Similarity=0.193  Sum_probs=33.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAAN  103 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~  103 (249)
                      .|.+++|+| ++++|..++..+...|+ +|+++++++++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            578999997 59999999998888999 8999988876543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.51  E-value=0.13  Score=44.51  Aligned_cols=42  Identities=24%  Similarity=0.325  Sum_probs=36.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .+.+++|.|+++.+|..+++.+...|++|+.++++.++.+..
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            468899999999999999999999999999999987766544

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.49  E-value=0.065  Score=48.72  Aligned_cols=39  Identities=33%  Similarity=0.522  Sum_probs=34.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ++.|.||.|++|.++|+.|.+.|++|.+++|+++...+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            588999999999999999999999999999997765443

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.47  E-value=0.28  Score=42.44  Aligned_cols=113  Identities=12%  Similarity=0.077  Sum_probs=66.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|.|+ |.+|..+|..|+.+|  ..|+++++++++++..+.++.....-.   .......   .+.+       .   
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~---~~~~i~~---~d~~-------~---   64 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFV---KPVRIYA---GDYA-------D---   64 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccccc---CCeEEee---CCHH-------H---
Confidence            3788898 799999999999999  589999999887765555555421110   1112211   1221       1   


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS  207 (249)
                       ..+-|++|.++|.....   ..+   ....+..|.    .+.+.+.+.+.+. ..|.|++++.
T Consensus        65 -l~~aDiViita~~~~~~---~~~---r~dl~~~n~----~i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          65 -CKGADVVVITAGANQKP---GET---RLDLLKRNV----AIFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             -hCCCCEEEEccCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence             23689999999975321   112   223344443    3344444444432 3466666654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.45  E-value=0.091  Score=36.25  Aligned_cols=36  Identities=33%  Similarity=0.579  Sum_probs=30.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEc
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVR   97 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r   97 (249)
                      .++++++++|.|+ ++.|+.++..|.+. +.+|.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578899999999 99999999999998 457777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.45  E-value=0.12  Score=44.82  Aligned_cols=40  Identities=13%  Similarity=0.132  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .+.+++|.|+++++|.+++..+...|++|+.+.+++++.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~  204 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE  204 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4789999999999999999999999999999999876654

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.44  E-value=0.089  Score=46.77  Aligned_cols=37  Identities=19%  Similarity=0.195  Sum_probs=31.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA  101 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~  101 (249)
                      .|.+++|.|+ +++|...+......|++|++++++.++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            5789999986 899999999888899999998887654

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.40  E-value=0.096  Score=45.75  Aligned_cols=79  Identities=23%  Similarity=0.274  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++++|+|+ +++|...++.+...|+ +|++++++.++.+.. .++    .     .+.   ..|..+.+..+++.+..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~----g-----a~~---~i~~~~~~~~~~l~~~~  237 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL----G-----ATI---VLDPTEVDVVAEVRKLT  237 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----C-----CCE---EECCCccCHHHHHHHHh
Confidence            5789999985 7999999999999999 788888887765433 221    1     111   12444433333332222


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                       . -+++|+++.++|.
T Consensus       238 -~-~~~~d~vid~~g~  251 (351)
T cd08233         238 -G-GGGVDVSFDCAGV  251 (351)
T ss_pred             -C-CCCCCEEEECCCC
Confidence             1 1249999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.36  E-value=0.17  Score=43.87  Aligned_cols=114  Identities=13%  Similarity=0.118  Sum_probs=64.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           68 CIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      +.|+|++|.+|.++|..|+.++.  +++++|+++  .+..+-++....      ....+..+.- + ++.       .+.
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~------~~~~i~~~~~-~-~~~-------~~~   64 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP------TAASVKGFSG-E-EGL-------ENA   64 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC------cCceEEEecC-C-Cch-------HHH
Confidence            78999999999999999998875  799999886  222222222210      0111111000 0 001       112


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCC
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSV  208 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~  208 (249)
                      +.+-|++|..||.... +  ..+   -...++.|+.    +.+.+.+.+.+.. .+.|+++|--
T Consensus        65 ~~daDivvitaG~~~~-~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNP  118 (312)
T TIGR01772        65 LKGADVVVIPAGVPRK-P--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNP  118 (312)
T ss_pred             cCCCCEEEEeCCCCCC-C--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCc
Confidence            3478999999997532 1  122   2344566655    4455555554433 4566666654

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.35  E-value=0.093  Score=41.13  Aligned_cols=42  Identities=26%  Similarity=0.329  Sum_probs=32.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +...+++|+| +|-.|...++.|...|++|+..+.+++..++.
T Consensus        18 ~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~   59 (168)
T PF01262_consen   18 VPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQL   59 (168)
T ss_dssp             E-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred             CCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence            4457889998 55889999999999999999999987665443

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.32  E-value=0.19  Score=43.13  Aligned_cols=74  Identities=19%  Similarity=0.248  Sum_probs=47.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC-------------------hHHHHHHHHHHHHhhcCCCCCCceEEEEc
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRN-------------------LKAANELIQKWQEEWSGKGLPLNIEAMEL  127 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  127 (249)
                      |+|.| .||+|-++++.|+..|. ++.++|.+                   ..+.+..++.+++..    ...++..+..
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~n----p~v~I~~~~~   76 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRV----PGVNVTPHFG   76 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHC----CCCEEEEEec
Confidence            67777 56999999999999998 78888742                   223444444444432    2356677766


Q ss_pred             cCCCHHHHHHHHHHHhccCCCccEEEec
Q 025705          128 DLLSLDSVVRFSEAWNGRLGPLHVLINN  155 (249)
Q Consensus       128 D~~~~~~v~~~~~~~~~~~g~id~linn  155 (249)
                      ++.+.+  .++       +..+|++|.+
T Consensus        77 ~i~~~~--~~f-------~~~fdvVi~a   95 (291)
T cd01488          77 KIQDKD--EEF-------YRQFNIIICG   95 (291)
T ss_pred             ccCchh--HHH-------hcCCCEEEEC
Confidence            776432  122       2367888775

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK07877 hypothetical protein; Provisional

Probab=95.30  E-value=0.14  Score=49.36  Aligned_cols=82  Identities=24%  Similarity=0.278  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcC------------------hHHHHHHHHHHHHhhcCCCCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRN------------------LKAANELIQKWQEEWSGKGLPL  120 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~------------------~~~~~~~~~~~~~~~~~~~~~~  120 (249)
                      ..+++.+|+|.|+  |+|..+|..|++.|.  ++.++|.+                  ..|.+..++++.+.    +...
T Consensus       103 ~~L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~i----np~i  176 (722)
T PRK07877        103 ERLGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAEL----DPYL  176 (722)
T ss_pred             HHHhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHH----CCCC
Confidence            4567889999999  499999999999994  89998863                  12333333343332    2335


Q ss_pred             ceEEEEccCCCHHHHHHHHHHHhccCCCccEEEecc
Q 025705          121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNA  156 (249)
Q Consensus       121 ~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linna  156 (249)
                      ++..+...++ .+.++++++       +.|++|.|.
T Consensus       177 ~v~~~~~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        177 PVEVFTDGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             EEEEEeccCC-HHHHHHHhc-------CCCEEEECC
Confidence            6677766665 444544433       467776663

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.28  E-value=0.17  Score=44.66  Aligned_cols=42  Identities=17%  Similarity=0.086  Sum_probs=34.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANEL  105 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~  105 (249)
                      ..|.+++|.|+ +++|...+..+...|+ +|+.++++.++.+..
T Consensus       183 ~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         183 EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            35789999975 8999999988888899 688899887765433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.041  Score=47.25  Aligned_cols=43  Identities=16%  Similarity=0.247  Sum_probs=37.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .+++||++.|.|.++-+|+.+|..|.++|+.|.++.++...++
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            3689999999999999999999999999999999977654433

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.27  E-value=0.21  Score=44.46  Aligned_cols=43  Identities=19%  Similarity=0.233  Sum_probs=36.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ..+.+++|+|+++++|.+++..+...|+++++++++.++.+..
T Consensus       192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            3578999999999999999988888999988888887665433

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.25  E-value=0.2  Score=43.65  Aligned_cols=65  Identities=20%  Similarity=0.248  Sum_probs=46.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHH--------HHHHHHHHhhcCCCCCCceEEEEccCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAAN--------ELIQKWQEEWSGKGLPLNIEAMELDLLS  131 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~D~~~  131 (249)
                      ..+.||++-|.|.+ .||+++|+++...|++|+..++ ......        ...+++.++       .++..+.+-+|+
T Consensus       138 ~el~gkTvGIiG~G-~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~-------sDiv~lh~PlT~  209 (324)
T COG0111         138 TELAGKTVGIIGLG-RIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAE-------ADILTLHLPLTP  209 (324)
T ss_pred             ccccCCEEEEECCC-HHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhh-------CCEEEEcCCCCc
Confidence            36789999999975 7999999999999999999998 332211        112333331       467777777776


Q ss_pred             HH
Q 025705          132 LD  133 (249)
Q Consensus       132 ~~  133 (249)
                      ..
T Consensus       210 eT  211 (324)
T COG0111         210 ET  211 (324)
T ss_pred             ch
Confidence            53

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.23  E-value=0.071  Score=37.33  Aligned_cols=36  Identities=31%  Similarity=0.506  Sum_probs=31.2

Q ss_pred             CCCchHHHHHHHHHHcC---CEEEEE-EcChHHHHHHHHH
Q 025705           73 STSGIGREIARQLAESG---AHVVMA-VRNLKAANELIQK  108 (249)
Q Consensus        73 as~gIG~~ia~~l~~~G---~~Vil~-~r~~~~~~~~~~~  108 (249)
                      |+|.+|.++++.|++.|   .+|.++ +|++++.++..++
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~   45 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKE   45 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHh
Confidence            77899999999999999   899966 9999888777655

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.22  E-value=0.14  Score=44.46  Aligned_cols=36  Identities=22%  Similarity=0.377  Sum_probs=31.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      ..|.+++|+|+++++|.+++......|++|+.+.++
T Consensus       161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            358999999999999999999999999998887764

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.21  E-value=0.62  Score=40.77  Aligned_cols=40  Identities=25%  Similarity=0.268  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA  101 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~  101 (249)
                      ..+.||++.|.|- |.||+.+|+.|...|++|+.++|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4689999999998 799999999999999999999987543

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.19  E-value=0.18  Score=37.22  Aligned_cols=68  Identities=19%  Similarity=0.207  Sum_probs=43.3

Q ss_pred             chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCCCccEEEec
Q 025705           76 GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINN  155 (249)
Q Consensus        76 gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linn  155 (249)
                      |||...+..+...|++|+++++++++.+... ++-           .. ...|..+.+ +.+.+.++... .++|++|.+
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~G-----------a~-~~~~~~~~~-~~~~i~~~~~~-~~~d~vid~   65 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELG-----------AD-HVIDYSDDD-FVEQIRELTGG-RGVDVVIDC   65 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTT-----------ES-EEEETTTSS-HHHHHHHHTTT-SSEEEEEES
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhc-----------cc-ccccccccc-ccccccccccc-ccceEEEEe
Confidence            6899999999999999999999987764432 211           11 124554444 22222332211 369999999


Q ss_pred             ccc
Q 025705          156 AGI  158 (249)
Q Consensus       156 ag~  158 (249)
                      +|.
T Consensus        66 ~g~   68 (130)
T PF00107_consen   66 VGS   68 (130)
T ss_dssp             SSS
T ss_pred             cCc
Confidence            983

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.19  E-value=0.039  Score=42.98  Aligned_cols=42  Identities=21%  Similarity=0.345  Sum_probs=33.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      +++||+++|.|.|.-+|+.++..|.++|+.|.++...-+.++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~   74 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ   74 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc
Confidence            589999999999999999999999999999999876644443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PLN02827 Alcohol dehydrogenase-like

Probab=95.17  E-value=0.21  Score=44.39  Aligned_cols=80  Identities=15%  Similarity=0.260  Sum_probs=50.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~  140 (249)
                      ..|.+|+|.|+ +++|...+..+...|++ |+.+++++++.+.. +++       +  .. .+  .|..+. +...+.+.
T Consensus       192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l-------G--a~-~~--i~~~~~~~~~~~~v~  257 (378)
T PLN02827        192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF-------G--VT-DF--INPNDLSEPIQQVIK  257 (378)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-------C--Cc-EE--EcccccchHHHHHHH
Confidence            35899999985 89999999888888985 77777777655433 221       1  11 11  233331 23444444


Q ss_pred             HHhccCCCccEEEecccc
Q 025705          141 AWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       141 ~~~~~~g~id~linnag~  158 (249)
                      ++..  +.+|++|.++|.
T Consensus       258 ~~~~--~g~d~vid~~G~  273 (378)
T PLN02827        258 RMTG--GGADYSFECVGD  273 (378)
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            4332  369999999884

>PRK14852 hypothetical protein; Provisional

Probab=95.16  E-value=0.18  Score=49.81  Aligned_cols=82  Identities=13%  Similarity=0.193  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC-------------------hHHHHHHHHHHHHhhcCCCCCCc
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN-------------------LKAANELIQKWQEEWSGKGLPLN  121 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~  121 (249)
                      .+++.+|+|.| .||+|..+++.|+..|. ++.++|.+                   ..+.+..++.+.+.    +...+
T Consensus       329 kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I----NP~v~  403 (989)
T PRK14852        329 RLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV----NPFLD  403 (989)
T ss_pred             HHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH----CCCCe
Confidence            45678899998 56999999999999998 78888753                   22344444444432    23356


Q ss_pred             eEEEEccCCCHHHHHHHHHHHhccCCCccEEEecc
Q 025705          122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNA  156 (249)
Q Consensus       122 v~~~~~D~~~~~~v~~~~~~~~~~~g~id~linna  156 (249)
                      +..+...++ .+.+.++++       .+|++|.+.
T Consensus       404 I~~~~~~I~-~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        404 IRSFPEGVA-AETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             EEEEecCCC-HHHHHHHhh-------CCCEEEECC
Confidence            666666653 344444433       467777653

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.15  E-value=0.23  Score=44.52  Aligned_cols=35  Identities=20%  Similarity=0.327  Sum_probs=29.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEc
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVR   97 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r   97 (249)
                      .+++.+|+|.|++ |+|..+++.|++.|. ++.++|.
T Consensus        39 ~L~~~~VlviG~G-GlGs~va~~La~~Gvg~i~lvD~   74 (392)
T PRK07878         39 RLKNARVLVIGAG-GLGSPTLLYLAAAGVGTLGIVEF   74 (392)
T ss_pred             HHhcCCEEEECCC-HHHHHHHHHHHHcCCCeEEEECC
Confidence            3456789999875 999999999999998 7888875

>PRK07411 hypothetical protein; Validated

Probab=95.15  E-value=0.2  Score=44.82  Aligned_cols=35  Identities=17%  Similarity=0.326  Sum_probs=29.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEc
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVR   97 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r   97 (249)
                      .++..+|+|.|++ |+|..+++.|+..|. ++.++|.
T Consensus        35 ~L~~~~VlivG~G-GlG~~va~~La~~Gvg~l~lvD~   70 (390)
T PRK07411         35 RLKAASVLCIGTG-GLGSPLLLYLAAAGIGRIGIVDF   70 (390)
T ss_pred             HHhcCcEEEECCC-HHHHHHHHHHHHcCCCEEEEECC
Confidence            4566789999876 999999999999998 7888875

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.14  E-value=0.16  Score=44.02  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=32.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      .|++++|.|+++++|.++++.+...|++|+.+.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            5789999999999999999999999999988887653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.14  E-value=0.57  Score=37.39  Aligned_cols=93  Identities=19%  Similarity=0.154  Sum_probs=64.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+++|++|+=-|++.|+   ++...+-.|+ .|+.++.+++.++-..+.+.+      ...++.++.+|+++..      
T Consensus        42 g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~------l~g~v~f~~~dv~~~~------  106 (198)
T COG2263          42 GDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEE------LLGDVEFVVADVSDFR------  106 (198)
T ss_pred             CCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHh------hCCceEEEEcchhhcC------
Confidence            56889999999987765   3334444675 799999999888777666665      2358999999998764      


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHH
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQ  177 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~  177 (249)
                             +++|.+|-|.-+...  ....+..-++..++
T Consensus       107 -------~~~dtvimNPPFG~~--~rhaDr~Fl~~Ale  135 (198)
T COG2263         107 -------GKFDTVIMNPPFGSQ--RRHADRPFLLKALE  135 (198)
T ss_pred             -------CccceEEECCCCccc--cccCCHHHHHHHHH
Confidence                   578899999765432  22234445555554

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.11  E-value=0.11  Score=44.07  Aligned_cols=39  Identities=26%  Similarity=0.268  Sum_probs=32.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAAN  103 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~  103 (249)
                      .|++++|.|+ +++|...+..+...|++ |+++++++++++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            6889999986 79999998888888996 888888776654

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.10  E-value=0.13  Score=45.91  Aligned_cols=40  Identities=18%  Similarity=0.280  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .|.+++|.|+++++|..++..+...|+++++++++.++.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~  228 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE  228 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            5789999999999999999988899999888887765543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.09  E-value=0.11  Score=48.90  Aligned_cols=37  Identities=22%  Similarity=0.384  Sum_probs=32.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      ..+++.+|+|.|++ |+|-.+|+.|++-|. +++++|.+
T Consensus       334 ekL~~~kVLIvGaG-GLGs~VA~~La~~GVg~ItlVD~D  371 (664)
T TIGR01381       334 ERYSQLKVLLLGAG-TLGCNVARCLIGWGVRHITFVDNG  371 (664)
T ss_pred             HHHhcCeEEEECCc-HHHHHHHHHHHHcCCCeEEEEcCC
Confidence            56778889999875 999999999999998 78888853

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.09  E-value=0.045  Score=42.10  Aligned_cols=42  Identities=33%  Similarity=0.419  Sum_probs=34.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHH
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE  111 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~  111 (249)
                      |+.+|+.+-+|+++|..|.++|.+|++.  +.+..+....++..
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence            5889999999999999999999999998  55555555555543

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.07  E-value=0.22  Score=44.08  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=34.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANEL  105 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~  105 (249)
                      ..|.+++|.| ++++|..++..+...|+ +|+.++++.++.+..
T Consensus       189 ~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a  231 (373)
T cd08299         189 TPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA  231 (373)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            3478899996 58999999999999999 799999887765444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.06  E-value=0.085  Score=44.97  Aligned_cols=39  Identities=18%  Similarity=0.325  Sum_probs=34.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      ++.||.|+|.|.|.-+|+.+|..|.++|+.|.++.....
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~  192 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK  192 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH
Confidence            688999999999999999999999999999988765433

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.06  E-value=0.18  Score=44.03  Aligned_cols=40  Identities=20%  Similarity=0.141  Sum_probs=33.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANE  104 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~  104 (249)
                      .|++++|+| ++++|...+..+...|++ |+.+++++++.+.
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            578999997 599999999888889997 6778888776553

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.03  E-value=0.12  Score=40.23  Aligned_cols=36  Identities=19%  Similarity=0.288  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR   97 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r   97 (249)
                      -+++|+.++|.||+ .+|...++.|.+.|++|.+++.
T Consensus         9 l~l~~~~vlVvGGG-~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          9 FNLHNKVVVIIGGG-KIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEcCCCEEEEECCC-HHHHHHHHHHHhCCCEEEEEcC
Confidence            36899999999976 7999999999999999998853

>smart00829 PKS_ER Enoylreductase

Probab=95.03  E-value=0.18  Score=41.97  Aligned_cols=42  Identities=14%  Similarity=0.256  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .|.+++|.|+++++|..++......|++|+.++++.++.+..
T Consensus       104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  145 (288)
T smart00829      104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL  145 (288)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            567899999999999999988888999999999887765443

Enoylreductase in Polyketide synthases.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.01  E-value=0.17  Score=43.60  Aligned_cols=40  Identities=18%  Similarity=0.248  Sum_probs=35.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .|.+++|.|+++.+|..++..+...|++|+.++++.++.+
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~  179 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ  179 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999888889999999888876653

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=94.96  E-value=0.13  Score=44.53  Aligned_cols=39  Identities=18%  Similarity=0.025  Sum_probs=32.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAA  102 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~  102 (249)
                      ..+++++|.| ++++|.+++..+...|+ +|+.+++++++.
T Consensus       166 ~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~  205 (344)
T cd08284         166 RPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERL  205 (344)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHH
Confidence            3578999996 68999999999999997 788887776554

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.96  E-value=0.093  Score=44.91  Aligned_cols=46  Identities=20%  Similarity=0.202  Sum_probs=38.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE  112 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~  112 (249)
                      ++|.|.|+ |-+|..+|..|+..|++|++.+++++.++...+++.+.
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~   51 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKS   51 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHH
Confidence            35777777 69999999999999999999999999888766665544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	249
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		2e-24
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-11
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-10
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-10
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		3e-10
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-09
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		2e-09
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-09
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-09
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-09
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		8e-09
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-09
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-08
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		3e-08
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-08
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-08
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		5e-08
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		5e-08
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-08
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		8e-08
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		9e-08
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		9e-08
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-07
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		1e-07
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		1e-07
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-07
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-07
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		2e-07
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-07
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		2e-07
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		4e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-07
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		4e-07
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		5e-07
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		5e-07
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		5e-07
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		5e-07
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		5e-07
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		6e-07
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		6e-07
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		6e-07
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		7e-07
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		8e-07
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		8e-07
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		9e-07
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-06
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-06
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-06
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-06
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-06
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-06
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-06
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-06
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		2e-06
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-06
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-06
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		2e-06
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-06
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-06
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-06
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-06
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-06
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-06
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		3e-06
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-06
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		3e-06
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-06
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		3e-06
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		3e-06
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		3e-06
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		3e-06
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-06
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-06
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		4e-06
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		4e-06
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		4e-06
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-06
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		8e-06
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		8e-06
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		9e-06
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		9e-06
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		1e-05
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-05
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-05
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		1e-05
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-05
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		1e-05
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-05
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		1e-05
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		2e-05
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		2e-05
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-05
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		2e-05
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		2e-05
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		2e-05
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-05
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		2e-05
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-05
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		2e-05
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-05
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		3e-05
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		3e-05
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		3e-05
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		3e-05
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		3e-05
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-05
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-05
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		3e-05
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		4e-05
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		5e-05
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		5e-05
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-05
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		5e-05
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-05
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		6e-05
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		6e-05
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		6e-05
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		7e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		8e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		8e-05
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		1e-04
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		1e-04
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		1e-04
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		1e-04
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-04
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-04
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-04
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-04
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-04
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		3e-04
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		3e-04
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		3e-04
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		5e-04
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		5e-04
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		5e-04
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		6e-04
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		6e-04
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-04
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		6e-04
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		7e-04
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		8e-04
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		9e-04
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		9e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 21/184 (11%)
Query: 60  LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP 119
           LP     T ++TG+ SG+G   AR+LA  GA V+MAVR+ +         + E + + + 
Sbjct: 11  LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTR---------KGEAAARTMA 61
Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
             +E  ELDL  L SV RF++  +G      VLINNAGI ++  P   + DG+E  +  N
Sbjct: 62  GQVEVRELDLQDLSSVRRFADGVSG----ADVLINNAGIMAV--PYALTVDGFESQIGTN 115
Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
           HL    L+ LL P L      R++ V+S+ H+ G ++ ED+N  S  R+Y+  + YS SK
Sbjct: 116 HLGHFALTNLLLPRLT----DRVVTVSSMAHWPGRINLEDLNWRS--RRYSPWLAYSQSK 169
Query: 240 LAQV 243
           LA +
Sbjct: 170 LANL 173

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG + G+G  IA+ LAE+G  VV+A RNL+ A+E  QK  E++      +   A   D
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-----VETMAFRCD 79
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           + + + V +  EA   + G L  ++N AGI      ++F  D + + ++VN      +  
Sbjct: 80  VSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCR 139
Query: 189 LLFPSLIRGS--PSRIINVNSV 208
             F SL+R S  PS IIN+ S+
Sbjct: 140 EAF-SLLRESDNPS-IINIGSL 159

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 13/149 (8%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG + GIG  I  +LA  GA V    RN K  +E ++ W+E    KG  LN+E   
Sbjct: 23  TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE----KG--LNVEGSV 76
Query: 127 LDLLS---LDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
            DLLS    D +++  +  ++G+   L++L+NNAG+    E + F++  Y   M  N  A
Sbjct: 77  CDLLSRTERDKLMQTVAHVFDGK---LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 133
Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHY 211
              LS + +P L       +I ++S+  +
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAGF 162

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
            T +VTG + GIG  I  +LA  GA V    RN K  N+ + +W+     KG    +EA 
Sbjct: 10  CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS----KGFK--VEAS 63
Query: 126 ELDLLSLDSVVRF-SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
             DL S        +   N   G L++L+NNAGI    E + ++ + Y   M +N  A  
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123
Query: 185 LLSILLFPSLIRGSPSRIINVNSV 208
            LS+L  P L       ++ ++SV
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSV 147

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
            T +VTG + GIG  I  +LA  GA V    RN K  N+ + +W+     KG    +EA 
Sbjct: 9   CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS----KGFK--VEAS 62
Query: 126 ELDLLSLDSVVRF-SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
             DL S        +   N   G L++L+NNAGI    E + ++ + Y   M +N  A  
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122
Query: 185 LLSILLFPSLIRGSPSRIINVNSV 208
            LS+L  P L       ++ ++SV
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSV 146

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 50  LASHLQNPLPLPPVND-LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK 108
           L +  Q P  +    D    IVTG++ GIGR IA +LA  GA V+        A  +   
Sbjct: 12  LEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAA 71
Query: 109 W-QEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF 167
           + Q    G+G  LN+     D  ++D++V   E+     G L+VL+NNAGI       + 
Sbjct: 72  FKQAGLEGRGAVLNVN----DATAVDALV---ESTLKEFGALNVLVNNAGITQDQLAMRM 124
Query: 168 SKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
             D ++  +  N  A   LS  +   +++    RI+N+ SV+   G
Sbjct: 125 KDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG 170

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTGST GIGR IA +LA +G+ V++   + + A  + ++   ++  K        +E++
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKA-----HGVEMN 65
Query: 129 LLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           LLS +S+ + F E +N  +  + +L+NNAGI       + S   +EE ++VN     L++
Sbjct: 66  LLSEESINKAFEEIYN-LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVT 124
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
                 +I+    RI+N++SV+ + G V
Sbjct: 125 QNSLRKMIKQRWGRIVNISSVVGFTGNV 152

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           L  +VTG+  GIGR+  + L  SGA VV   R     N  +    +E  G      IE +
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRT----NSDLVSLAKECPG------IEPV 57
Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            +DL   D+    +E   G +GP+ +L+NNA +  +    + +K+ ++    VN  +   
Sbjct: 58  CVDLGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQ 113
Query: 186 LSILLFPSLI-RGSPSRIINVNSVMHYVGF 214
           +S ++   +I RG P  I+NV+S++ +V F
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTF 143

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIG  IAR+L   GA VV+  R++    E ++  + E    G     E+   
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDV----EKLRAVEREIVAAG--GEAESHAC 85
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG-YEEHMQVNHLAPALL 186
           DL   D++  F+       G   VL+NNAG+   G P    K   ++  + VN  AP LL
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLL 145
Query: 187 SILLFPSLIRGSPSRIINVNSV 208
                P++I      IIN++S+
Sbjct: 146 LRAFAPAMIAAKRGHIINISSL 167

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIG+ IA  LAE GA V+    +   A  +     +  +GKG+ LN+   E 
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPE- 71
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
              S+++V++   A     G + +L+NNAGI       +  ++ + + M+ N  +   LS
Sbjct: 72  ---SIEAVLK---AITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLS 125
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +   +++    RIINV SV+  +G
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMG 151

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIG+ IA  LAE GA V+    +   A  +     +  +GKG+ LN+   E 
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPE- 71
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
              S+++V++   A     G + +L+NNAGI       +  ++ + + M+ N  +   LS
Sbjct: 72  ---SIEAVLK---AITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLS 125
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +   +++    RIINV SV+  +G
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMG 151

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIG+ IA  LAE GA V+    +   A  +     +  +GKG+ LN+   E 
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPE- 71
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
              S+++V++   A     G + +L+NNAGI       +  ++ + + M+ N  +   LS
Sbjct: 72  ---SIEAVLK---AITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLS 125
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +   +++    RIINV SV+  +G
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMG 151

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIG  IA   A++GA +V    N     EL+ +    +   G+  N      
Sbjct: 37  ALVTGASYGIGFAIASAYAKAGATIVFNDIN----QELVDRGMAAYKAAGI--NAHGYVC 90
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D+   D +          +G + +L+NNAGI       + +   + + + ++  AP ++S
Sbjct: 91  DVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVS 150
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             + PS+I+    +IIN+ S+M  +G
Sbjct: 151 KAVIPSMIKKGHGKIINICSMMSELG 176

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           + D   ++TG  +GIGR IA + A  GA + +A        +L+   + E + + L   +
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIA--------DLVPAPEAEAAIRNLGRRV 56
Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
             ++ D+     V  F +      G   +L+NNAGI+ +    + + + +++  ++N  +
Sbjct: 57  LTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDS 116
Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMH------YVGFVDTEDMNVVSGRRKYTSLMGYS 236
             L++    P + R    RIIN+ S  +      Y  ++ T+  N +   R   S +G  
Sbjct: 117 GFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAAN-IGFTRALASDLGKD 175
Query: 237 G 237
           G
Sbjct: 176 G 176

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           N   CIVTG  SGIGR  A   A++GA+VV+A  N  AA  +  +   +  G        
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFG-------- 77
Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            + +D+ S        E    + G + VL+NNAG  + G      ++ ++    VN    
Sbjct: 78  -VRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGI 136
Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD 216
            L S  + P   R     IIN  S        D
Sbjct: 137 FLCSKYVIPVXRRNGGGSIINTTSYTATSAIAD 169

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIG+ IA  LAE GA V+    +   A  +     +  +GKG+ LN+   E 
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPE- 71
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
              S+++V++   A     G + +L+NNA I       +  ++ + + M+ N  +   LS
Sbjct: 72  ---SIEAVLK---AITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLS 125
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +   +++    RIINV SV+  +G
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMG 151

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG + GIG+ IA+ L E+GA V +  R+ +A  +   +     S  G   + +A+  D
Sbjct: 33  LVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATR----LSAYG---DCQAIPAD 85
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L S     R ++A       L +L+NNAG       + +   G+E+ MQ+N  +      
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQ 145
Query: 189 LLFPSLIRGS----PSRIINVNSV 208
            L P L R +    P+R+IN+ SV
Sbjct: 146 QLLPLLRRSASAENPARVINIGSV 169

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 48  RILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQ 107
           R L ++  +  P   + D   ++TG+ +G+G+E A+  A+ GA VV  V + K A + + 
Sbjct: 305 RKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVV--VNDFKDATKTVD 362
Query: 108 KWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF 167
           + +    G+  P   +  +     + +V+        + G + +L+NNAGI       K 
Sbjct: 363 EIKAA-GGEAWPDQHDVAKDSEAIIKNVID-------KYGTIDILVNNAGILRDRSFAKM 414
Query: 168 SKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
           SK  ++   QV+ +    LS L +P  +     RIIN+ S 
Sbjct: 415 SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITST 455

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIG+ IA  LAE GA V+    +   A  +     +  +GKG+ LN+   E 
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPE- 71
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
              S+++V++   A     G + +L+NNA I       +  ++ + + M+ N  +   LS
Sbjct: 72  ---SIEAVLK---AITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLS 125
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +   +++    RIINV SV+  +G
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMG 151

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 31/168 (18%)
Query: 54  LQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW 113
           ++NP  L        +VTG+ +G+G+ IA  LA +GA VV A R  +A +E +    ++ 
Sbjct: 1   MKNPFSLEG---RKALVTGANTGLGQAIAVGLAAAGAEVVCAAR--RAPDETLDIIAKDG 55
Query: 114 SGKGLPLNIEAMELDLLS-LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGY 172
                  N  A+ +D    L +   F++A         +L+NNAGI    +  +FS+  +
Sbjct: 56  G------NASALLIDFADPLAAKDSFTDA------GFDILVNNAGIIRRADSVEFSELDW 103
Query: 173 EEHMQVNHLAPALLSILLFPS-------LIRGSPSRIINVNSVMHYVG 213
           +E M VN      L  L F +       L +G   +++N+ S++ + G
Sbjct: 104 DEVMDVN------LKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG 145

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 69  IVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG   GIG  I R L       VV+  R++      +Q+ Q E       L+    +L
Sbjct: 8   LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG------LSPRFHQL 61
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           D+  L S+    +      G L VL+NNAGI F + +P  F     E  M+ N      +
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQA-EVTMKTNFFGTRDV 120
Query: 187 SILLFPSLIRGSPSRIINVNSVM 209
              L P LI+    R++NV+S+M
Sbjct: 121 CTELLP-LIKPQ-GRVVNVSSIM 141

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + +VTG++ GIGR IA QLAE G +V +   N   + E  +   EE   KG  ++  A++
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKG--VDSFAIQ 66
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            ++   D V    +    + G L VL+NNAGI       +  +  +++ +  N       
Sbjct: 67  ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNC 126
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
                P ++R     IIN++SV+  VG
Sbjct: 127 IQKATPQMLRQRSGAIINLSSVVGAVG 153

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ-EEWSGKGLPL 120
           P+ +   +VT ST GIG  IAR+LA+ GAHVV++ R  +  ++ +   Q E  S  G   
Sbjct: 12  PLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVC 71
Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVN 179
           ++   E     + + V+         G + +L++NA +    G     +++ +++ + +N
Sbjct: 72  HVGKAEDRERLVATAVKLH-------GGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDIN 124
Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVMHY 211
             APAL++  + P + +     ++ V+S+  +
Sbjct: 125 VKAPALMTKAVVPEMEKRGGGSVVIVSSIAAF 156

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 69  IVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG   GIG  I R L       VV+  R++      +Q+ Q E       L+    +L
Sbjct: 8   LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG------LSPRFHQL 61
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           D+  L S+    +      G L VL+NNAGI F + +P  F     E  M+ N      +
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQA-EVTMKTNFFGTRDV 120
Query: 187 SILLFPSLIRGSPSRIINVNSVM 209
              L P LI+    R++NV+S+M
Sbjct: 121 XTELLP-LIKPQ-GRVVNVSSIM 141

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 50  LASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKW 109
           L +  Q P  +  +     +VTG+T GIG  IAR       H   A+  L    E   K 
Sbjct: 12  LEAQTQGPGSMFKLTGRKALVTGATGGIGEAIARCF-----HAQGAIVGLHGTRE--DKL 64
Query: 110 QEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSK 169
           +E  +   L  ++     +L    S+ + +E     +  + +L+NNAGI   G   +   
Sbjct: 65  KEIAAD--LGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQD 122
Query: 170 DGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
             +++ + VN  A + L+  L  S++R    RIIN+ S++  VG
Sbjct: 123 QDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG 166

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG+ SGIGR IA   A +GAHV+   R      + +++  +E +  G   + EA+ 
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWGR-----TDGVKEVADEIADGG--GSAEAVV 85
Query: 127 LDLLSLDSVVRFSE--AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
            DL  L+     +E  A   R   + VL+NNAGI +    ++ S   + E + VN  A  
Sbjct: 86  ADLADLEGAANVAEELAATRR---VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAW 142
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           +LS     +++     RI+ + S++ + G
Sbjct: 143 VLSRSFGTAMLAHGSGRIVTIASMLSFQG 171

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T IVTGS+ G+G+ IA +L   GA++V+   N   A+  +    EE+   G+  N+   +
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVL---NGSPASTSLDATAEEFKAAGI--NVVVAK 61
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+ + + V    +      G + +L+NNAGI       K S+  +++ +  N  +  L 
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLC 121
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           +  +   +++    +IIN+ S+   +G
Sbjct: 122 TKAVSKIMLKQKSGKIINITSIAGIIG 148

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 36/181 (19%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG   GIG EI +QL+ +G  VV+  R++   +E ++K +          N+   +LD
Sbjct: 16  VVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-----NVVFHQLD 70
Query: 129 LLS-LDSVVRFSEAWNGRLGPLHVLINNAGI--FSIG----------------------- 162
           +   + ++   ++      G L +L+NNAG+  FS+                        
Sbjct: 71  VTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYE 130
Query: 163 --EPQKFSKDGY---EEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT 217
             E Q+   + Y   EE +++N+     ++ +L P L      RI+NV+S    + +V  
Sbjct: 131 KPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSN 190
Query: 218 E 218
           E
Sbjct: 191 E 191

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           V D   ++TG++ GIG  IAR+L  +GA +++  R  +A  E I     +  G  L    
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARR-QARIEAIATEIRDAGGTAL---- 56
Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
            A  LD+    SV  F++A     G + VL+NNAG+  +        D +E  + VN
Sbjct: 57  -AQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVN 112

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 65  DLTC-IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           D  C I+TG+ +GIG+EIA   A +GA VV++  N  AAN ++ + Q +  G+       
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ-QLGGQAF----- 63
Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFS--KDGYEEHMQVNHL 181
           A   D+ S   +   ++    +LG + +L+NNAG    G P+ F      +    ++N  
Sbjct: 64  ACRCDITSEQELSALADFAISKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVF 120
Query: 182 APALLSILLFPSLIRGSPSRIINVNSV 208
           +   LS L+ P + +     I+ + S+
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSM 147

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++SG GR IA     +G  V+   R  +A ++L+  +         P   EA+ LD
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---------PDRAEAISLD 59
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +   + +   +     R G + VL+NNAG   +G  ++ ++    +  +++   PA L+ 
Sbjct: 60  VTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTR 119
Query: 189 LLFPSLI-RGSPSRIINVNSV---MHYVGF 214
            L P    RGS S ++N++S    + + GF
Sbjct: 120 ALLPQXRERGSGS-VVNISSFGGQLSFAGF 148

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIGR IA  LA  GA V+    +   A  +        +GKGL LN+     
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--ANGKGLMLNVT---- 61
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D  S++SV+   E      G + +L+NNAGI       +   + + + ++ N  +   LS
Sbjct: 62  DPASIESVL---EKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +  ++++    RII + SV+  +G
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMG 144

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIGR IA  LA  GA V+    +   A  +        +GKGL LN+     
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--ANGKGLMLNVT---- 61
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D  S++SV+   E      G + +L+NNAGI       +   + + + ++ N  +   LS
Sbjct: 62  DPASIESVL---EKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +  ++++    RII + SV+  +G
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMG 144

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P+N   C+VTG++ GIGR IA QL ++GA V +  R+L     + Q+ Q    G+ +P+ 
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ-SLGGQCVPVV 60
Query: 122 IEAMELDLLSLDSVVR--FSEAWNGRLGPLHVLINNA 156
            ++      S +S VR  F +    + G L VL+NNA
Sbjct: 61  CDS------SQESEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIGR   + L  +GA VV   R     + L+++             IE + +D
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------GIEPVCVD 60
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L   ++    +E   G +GP+ +L+NNA +  +    + +K+ ++   +VN  A   +S 
Sbjct: 61  LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 189 LLFPSLI-RGSPSRIINVNS 207
           ++   LI RG P  I+NV+S
Sbjct: 117 IVARGLIARGVPGAIVNVSS 136

>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 245

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIGR   + L  +GA VV   R     + L+++             IE + +D
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------GIEPVCVD 60
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L   ++    +E   G +GP+ +L+NNA +  +    + +K+ ++   +VN  A   +S 
Sbjct: 61  LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 189 LLFPSLI-RGSPSRIINVNS 207
           ++   LI RG P  I+NV+S
Sbjct: 117 IVARGLIARGVPGAIVNVSS 136

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 31/178 (17%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGREIA  LA+ GAHVV+  R+ +A  +++ +  E   G      I     D
Sbjct: 13  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLE--LGAASAHYIAGSMED 70
Query: 129 LLSLDSVVRFSEAWN--GRLGPL---HVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
           +   +  V  +EA N  G L  L   HVL N    F  GE      D   + M+VN  + 
Sbjct: 71  MTFAEEFV--AEAGNLMGGLDMLILNHVLYNRLTFFH-GEI-----DNVRKSMEVNFHSF 122
Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
            +LS+   P L++ S   I  V+S               V+G+  Y  +  YS SK A
Sbjct: 123 VVLSVAAMPMLMQ-SQGSIAVVSS---------------VAGKITYPLIAPYSASKFA 164

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 31/178 (17%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGREIA  LA+ GAHVV+  R+ +A  +++ +  E   G      I     D
Sbjct: 15  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLE--LGAASAHYIAGSMED 72
Query: 129 LLSLDSVVRFSEAWN--GRLGPL---HVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
           +   +  V  +EA N  G L  L   HVL N    F  GE      D   + M+VN  + 
Sbjct: 73  MTFAEEFV--AEAGNLMGGLDMLILNHVLYNRLTFFH-GEI-----DNVRKSMEVNFHSF 124
Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
            +LS+   P L++ S   I  V+S               V+G+  Y  +  YS SK A
Sbjct: 125 VVLSVAAMPMLMQ-SQGSIAVVSS---------------VAGKITYPLIAPYSASKFA 166

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+  GIGR   + L  +GA VV   R     + L+++             IE + +D
Sbjct: 11  LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------GIEPVCVD 60
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L   ++    +E   G +GP+ +L+NNA +  +    + +K+ ++   +VN  A   +S 
Sbjct: 61  LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 189 LLFPSLI-RGSPSRIINVNS 207
           ++   LI RG P  I+NV+S
Sbjct: 117 IVARGLIARGVPGAIVNVSS 136

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + +VTG++ GIGR IA QLAE G +V +   N   + E  +   EE   KG  ++  A++
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKG--VDSFAIQ 60
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            ++   D V    +    + G L VL+NNAGI       +  +  +++ +  N       
Sbjct: 61  ANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNC 120
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
                P  +R     IIN++SV+  VG
Sbjct: 121 IQKATPQXLRQRSGAIINLSSVVGAVG 147

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 31/178 (17%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGREIA  LA+ GAHVV+  R+ +A  +++ +  E   G      I     D
Sbjct: 15  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLE--LGAASAHYIAGSMED 72
Query: 129 LLSLDSVVRFSEAWN--GRLGPL---HVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
           +   +  V  +EA N  G L  L   HVL N    F  GE      D   + M+VN  + 
Sbjct: 73  MTFAEEFV--AEAGNLMGGLDMLILNHVLYNRLTFFH-GEI-----DNVRKSMEVNFHSF 124
Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
            +LS+   P L++ S   I  V+S               V+G+  Y  +  YS SK A
Sbjct: 125 VVLSVAAMPMLMQ-SQGSIAVVSS---------------VAGKITYPLIAPYSASKFA 166

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 86/195 (44%), Gaps = 31/195 (15%)
Query: 52  SHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE 111
           SH+        +     IVTG++ GIGREIA  LA+ GAHVV+  R+ +A  +++ +  E
Sbjct: 19  SHMNEKFRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLE 78
Query: 112 EWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN--GRLGPL---HVLINNAGIFSIGEPQK 166
              G      I     D+   +  V  +EA N  G L  L   HVL N    F  GE   
Sbjct: 79  --LGAASAHYIAGSMEDMTFAEEFV--AEAGNLMGGLDMLILNHVLYNRLTFFH-GEI-- 131
Query: 167 FSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR 226
              D   + M+VN  +  +LS+   P L++ S   I  V+S               V+G+
Sbjct: 132 ---DNVRKSMEVNFHSFVVLSVAAMPMLMQ-SQGSIAVVSS---------------VAGK 172
Query: 227 RKYTSLMGYSGSKLA 241
             Y  +  YS SK A
Sbjct: 173 ITYPLIAPYSASKFA 187

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   IVTG++ GIGR IA +  + G+ V+    +L   +    K+               
Sbjct: 15  DKVVIVTGASMGIGRAIAERFVDEGSKVI----DLSIHDPGEAKYDH------------- 57
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +E D+ + D V    +      G + VL+NNAGI S G+ +  S   +   + VN     
Sbjct: 58  IECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYY 117
Query: 185 LLSILLFPSLIRGSPSRIINVNSV 208
             S    P +IR     I+N++SV
Sbjct: 118 YASKFAIPYMIRSRDPSIVNISSV 141

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   IVTG++ GIGR IA +  + G+ V+    +L   +    K+               
Sbjct: 8   DKVVIVTGASMGIGRAIAERFVDEGSKVI----DLSIHDPGEAKYDH------------- 50
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +E D+ + D V    +      G + VL+NNAGI S G+ +  S   +   + VN     
Sbjct: 51  IECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYY 110
Query: 185 LLSILLFPSLIRGSPSRIINVNSV 208
             S    P +IR     I+N++SV
Sbjct: 111 YASKFAIPYMIRSRDPSIVNISSV 134

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWS---GKGLPLNIEAM 125
           ++TG+++GIG+++A   AE+GA V +A R+    ++ +Q   +E +   GK LP+     
Sbjct: 36  LITGASTGIGKKVALAYAEAGAQVAVAARH----SDALQVVADEIAGVGGKALPIR---- 87
Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSI 161
             D+   D V    +   G LG + + + NAGI S+
Sbjct: 88  -CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV 122

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAHV-VMAVRNLKAANELIQKWQEEWSGKGLPLNIE-AME 126
           +VTG++ GIG+ IA  L ++G  V V   R+ KAA E + K  E + G+ +    + + E
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEE-VSKQIEAYGGQAITFGGDVSKE 63
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+ ++       +AW    G + V++NNAGI       +  K  ++E + +N     L 
Sbjct: 64  ADVEAMMKTA--IDAW----GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLC 117
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           +      +++    RIIN+ SV+  +G
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIG 144

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +    D
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCD 83
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS- 187
           + S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N      ++ 
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 188 -ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +L    ++     RI+N+ S     G V
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVV 172

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P++    +VTG+  GIG  IA   A  GA VV    ++  A E +++  ++  G  L L+
Sbjct: 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAI--DVDGAAEDLKRVADKVGGTALTLD 267
Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           + A +    ++D +       +G  G + +L+NNAGI          +  ++  + VN L
Sbjct: 268 VTADD----AVDKITAHVTEHHG--GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLL 321
Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           AP  L+  L  +   G   R+I ++S+    G
Sbjct: 322 APQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG 353

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +    D
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCD 79
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS- 187
           + S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N      ++ 
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTK 139
Query: 188 -ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +L    ++     RI+N+ S     G V
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGKQGVV 168

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
            +VTG++ GIGR IA  LA+ GA+VV+    N + ANE++ +       K L  +  A+ 
Sbjct: 7   ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI------KKLGSDAIAVR 60
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+ + + V    +      G + +L+NNAG+       +  ++ ++  +  N     L 
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           +  +   ++R    RI+N+ SV+   G
Sbjct: 121 TKAVSRFMMRQRHGRIVNIASVVGVTG 147

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           PP    + +VTG   GIG  IA++LA  G  V +  R                 G G P 
Sbjct: 11  PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-----------------GSGAPK 53
Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            +  +E+D+   D+V R   A     GP+ VL++NAG+ +     + +++ +E+ +  N 
Sbjct: 54  GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL 113
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSV 208
                ++     S+ R    R+I + SV
Sbjct: 114 TGAFRVAQRASRSMQRNKFGRMIFIGSV 141

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIG+ IA  LAE GA V+    +   A  +     +  +GKG  LN+   E 
Sbjct: 12  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGXALNVTNPE- 68
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
              S+++V++   A     G + +L+NNAGI       +  ++ + +  + N  +   LS
Sbjct: 69  ---SIEAVLK---AITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLS 122
Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +     +    RIINV SV+   G
Sbjct: 123 KAVLRGXXKKRQGRIINVGSVVGTXG 148

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TGS+SGIG  IA   A+ GAH+V+  R +   +E  +  +E++  + L + ++    +
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
              +D+VV   E+     G   +L+NNAG  S     + + + ++ + +++ +A   L+ 
Sbjct: 71  --GVDAVV---ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLAR 125
Query: 189 LLFPSL-IRGSPSRIINVN 206
            L P +  RG  + I N +
Sbjct: 126 GLVPGMRARGGGAIIHNAS 144

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE-EWSGKGLPLNIEAMEL 127
           +VTG+  GIGREIA+ LA+S +HV+   R  K+ + ++ + +   +   G   ++   E 
Sbjct: 48  LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKE- 106
Query: 128 DLLSLDSVVRFSEAWNGRLGP---LHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
                      SE  N  L     + +L+NNAGI       +   D +E+ ++ N  +  
Sbjct: 107 ---------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF 157
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            ++  +   +I     RIIN++S++   G V
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNV 188

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 69  IVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG+  GIG  IAR+L       VV+  R++      +Q+ Q E       L+    +L
Sbjct: 6   LVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEG------LSPRFHQL 59
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           D+  L S+    +      G L+VL+NNA + F   +P  F     E  ++ N  A   +
Sbjct: 60  DIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKA-EMTLKTNFFATRNM 118
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVD-TEDM 220
              L P  I     R++N++S+     F + +ED+
Sbjct: 119 CNELLP--IMKPHGRVVNISSLQCLRAFENCSEDL 151

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P++    IVTG+  GIG  IA   A  GAHVV    ++++A E + +   +  G      
Sbjct: 210 PLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI--DVESAAENLAETASKVGGT----- 262
Query: 122 IEAMELDLLSLDSVVRFSEAW-NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
             A+ LD+ + D+V + SE   +   G   +L+NNAGI             ++  + VN 
Sbjct: 263 --ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 320
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           LAP  L+  L  +   G   R+I ++S+    G
Sbjct: 321 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAG 353

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P++    IVTG+  GIG  IA   A  GAHVV    ++++A E + +   +  G      
Sbjct: 202 PLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI--DVESAAENLAETASKVGGT----- 254
Query: 122 IEAMELDLLSLDSVVRFSEAW-NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
             A+ LD+ + D+V + SE   +   G   +L+NNAGI             ++  + VN 
Sbjct: 255 --ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 312
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           LAP  L+  L  +   G   R+I ++S+    G
Sbjct: 313 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAG 345

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 64  NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           N    +VTG+  GIG  I R L    A  VV+  R++      +++ Q E       L+ 
Sbjct: 3   NTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEG------LSP 56
Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHL 181
              +LD++ L S+    +      G L VL+NNA I F +  P  F     E  M+ N +
Sbjct: 57  RFHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQA-ELTMKTNFM 115
Query: 182 APALLSILLFPSLIRGSPSRIINVNSV 208
               +   L P LI+    R++NV+S 
Sbjct: 116 GTRNVCTELLP-LIKPQ-GRVVNVSST 140

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 17/148 (11%)
Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           PP    + +VTG   GIG  IA++LA  G  V +  R                 G G P 
Sbjct: 11  PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-----------------GSGAPK 53
Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            +  +E D+   D+V R   A     GP+ VL++NAG+ +     + +++ +E+ +  N 
Sbjct: 54  GLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL 113
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSV 208
                ++     S+ R    R+I + SV
Sbjct: 114 TGAFRVAQRASRSMQRNKFGRMIFIGSV 141

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P++    IVTG+  GIG  IA   A  GAHVV    ++++A E + +   +  G      
Sbjct: 218 PLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI--DVESAAENLAETASKVGGT----- 270
Query: 122 IEAMELDLLSLDSVVRFSEAW-NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
             A+ LD+ + D+V + SE   +   G   +L+NNAGI             ++  + VN 
Sbjct: 271 --ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 328
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           LAP  L+  L  +   G   R+I ++S+    G
Sbjct: 329 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAG 361

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P++    IVTG+  GIG  IA   A  GAHVV    ++++A E + +   +  G      
Sbjct: 231 PLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI--DVESAAENLAETASKVGGT----- 283
Query: 122 IEAMELDLLSLDSVVRFSEAW-NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
             A+ LD+ + D+V + SE   +   G   +L+NNAGI             ++  + VN 
Sbjct: 284 --ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 341
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           LAP  L+  L  +   G   R+I ++S+    G
Sbjct: 342 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAG 374

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P++    IVTG+  GIG  IA   A  GAHVV    ++++A E + +   +  G      
Sbjct: 194 PLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI--DVESAAENLAETASKVGGT----- 246
Query: 122 IEAMELDLLSLDSVVRFSEAW-NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
             A+ LD+ + D+V + SE   +   G   +L+NNAGI             ++  + VN 
Sbjct: 247 --ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 304
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           LAP  L+  L  +   G   R+I ++S+    G
Sbjct: 305 LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAG 337

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL---IQKWQEEWSGKGLPLNIEA 124
            IVTG++SGIGR  A   A  GA VV+  RN  A  EL   I     E +     +  EA
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEA 70
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAP 183
           +   L+ L   VR       R G L    NNAG   ++GE    S +G+ E +  N  + 
Sbjct: 71  LHEALVEL--AVR-------RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSA 121
Query: 184 ALLSILLFPSLIR-GSPSRIINVNSVMHYVGFV 215
            L +    P++   G  S     + V H  GF 
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFA 154

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           PP    + +VTG   GIG  IA++LA  G  V +  R                 G G P 
Sbjct: 31  PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-----------------GSGAPK 73
Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            +  +E+D+   D+V R   A     GP+ VL++NAG+ +     + +++ +E+ +  N 
Sbjct: 74  GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL 133
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSV 208
                ++     S+ R    R+I + SV
Sbjct: 134 TGAFRVAQRASRSMQRNKFGRMIFIASV 161

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE-WSGKGLPLNIE 123
           D   +VTG++ GIG  +AR L + G  VV   R +    EL  + +   + G  +P   +
Sbjct: 32  DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD 91
Query: 124 -AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
            + E D+LS+ S +R   +       + + INNAG+         S  G+++   VN LA
Sbjct: 92  LSNEEDILSMFSAIRSQHSG------VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLA 145
Query: 183 PALLSILLFPSLIRGS--PSRIINVNSV 208
            ++ +   + S+   +     IIN+NS+
Sbjct: 146 LSICTREAYQSMKERNVDDGHIININSM 173

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +    D
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCD 83
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS- 187
           + S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N      ++ 
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 188 -ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +L    ++     RI+N+ S     G V
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGLV 172

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG++ GIGR IA  LA  GA V+    +   A  +        +GKGL LN+     
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--ANGKGLMLNV----T 61
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D  S++SV+   E      G + +L+NNAGI       +   + + + ++ N  +   LS
Sbjct: 62  DPASIESVL---EKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 188 ILLFPSLIRGSPSRIINVNSVMHY 211
             +  ++++    RII +    +Y
Sbjct: 119 KAVMRAMMKKRHGRIITIGGQANY 142

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGKGLP 119
           +++   +VTG +SGIG      L E+GA V    R+   L+AA   ++   + + G  L 
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALR---QRFPGARLF 62
Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
            ++     D+L    V  F+EA    LG   +L+NNAG   +    + + + + E +Q+ 
Sbjct: 63  ASV----CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLK 118
Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVM 209
             +         P L   + + I+ VNS++
Sbjct: 119 FFSVIHPVRAFLPQLESRADAAIVCVNSLL 148

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +    D
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCD 83
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS- 187
           + S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N      ++ 
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 188 -ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +L    ++     RI+N+ S     G V
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVV 172

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKW--QEEWSGKGLPLNIEAME 126
            VTG   G+G  I+R+L ++G  V +   +    N+ +  W   E  +G+    + +A  
Sbjct: 29  FVTGGMGGLGAAISRRLHDAGMAVAV---SHSERNDHVSTWLMHERDAGR----DFKAYA 81
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+   +S  R +E      G + VLINNAGI       K +K  ++  M+ +  A   +
Sbjct: 82  VDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNV 141
Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           +      ++     RI+N+ SV
Sbjct: 142 TKQFIAGMVERRFGRIVNIGSV 163

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +    D
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCD 83
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS- 187
           + S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N      ++ 
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 188 -ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +L    ++     RI+N+ S     G V
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVV 172

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSG--KGLPLNIEA 124
           T ++TGSTSGIG  IAR LA++GA++V+   N   A + I+   +E +G   G  L+  A
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVL---NGFGAPDEIRTVTDEVAGLSSGTVLHHPA 83
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
              D      +         R G   +L+NNAG+  + + + F  + ++  + VN L+ +
Sbjct: 84  ---DXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVN-LSSS 139
Query: 185 LLSIL-LFPSLIRGSPSRIINVNS 207
             +I    P   +    RIIN+ S
Sbjct: 140 FHTIRGAIPPXKKKGWGRIINIAS 163

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +    D
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCD 83
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS- 187
           + S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N      ++ 
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 188 -ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +L    ++     RI+N+ S     G V
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVV 172

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +    D
Sbjct: 10  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCD 63
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS- 187
           + S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N      ++ 
Sbjct: 64  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 123
Query: 188 -ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +L    ++     RI+N+ S     G V
Sbjct: 124 QVLKAGGMLERGTGRIVNIASTGGKQGVV 152

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +    D
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCD 79
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS- 187
           + S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N      ++ 
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 139
Query: 188 -ILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +L    ++     RI+N+ S     G V
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGKQGVV 168

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TGS  GIGR  A      GA V +A  NL+AA     +               A+ 
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAAC---------AIA 57
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+    S+ R       R G + +L+NNA +F +    + +++ Y+    +N      +
Sbjct: 58  LDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFM 117
Query: 187 SILLFPSLIRGS-PSRIINVNS 207
              +  ++I G    +IIN+ S
Sbjct: 118 MQAVARAMIAGGRGGKIINMAS 139

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + +VTG T GIGR IA   A +GA+V +A R+ +  + +  +  E  +G     N+  + 
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG-----NVIGVR 97
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
           LD+    S    +       G L V+  NAGIF        + +   E + VN
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVN 150

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK----WQEEWSGKGLPLNIE 123
            +VTGSTSGIG  +A +LA++GA VV+   N     E I++     + ++  K   LN +
Sbjct: 7   AVVTGSTSGIGLAMATELAKAGADVVI---NGFGQPEDIERERSTLESKFGVKAYYLNAD 63
Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
             +    + D + + +EA    LG L +L+NNAGI      ++F  D +   + +N  A 
Sbjct: 64  LSDAQ-ATRDFIAKAAEA----LGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAV 118
Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD 216
              +    P + +    RIIN+ S    V  V+
Sbjct: 119 FHGTAAALPIMQKQGWGRIINIASAHGLVASVN 151

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TGS+SGIG  IA   A+ GAH+V+  R +   +E  +  +E++  + L + ++    +
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
              +D+VV   E+     G   +L+NNAG  S     + + + ++ + ++  +A   L+ 
Sbjct: 71  --GVDAVV---ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLAR 125
Query: 189 LLFPSL-IRGSPSRIINVN 206
            L P +  RG  + I N +
Sbjct: 126 GLVPGMRARGGGAIIHNAS 144

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN----ELIQKWQEEWSGKGLPLNIE 123
            ++TG++SG GR  A  LA +G  V  + R++   N    E I  +  +       +++ 
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDND-----VDLR 62
Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            +ELD+ S  SV R  +   G  G + VLI+NAG    G  + F+ + + E   +N L+ 
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLST 122
Query: 184 ALLSILLFPSLIR 196
             ++    P   R
Sbjct: 123 QRVNRAALPHXRR 135

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE-WSGKGLPLN 121
           +N+   +VTG++ GIG E+A  LA  GA VV    +  +A +     +E+ +  +GL LN
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           I  +E       S+  F          + +L+NNAGI       + S+D ++  +  N  
Sbjct: 63  ISDIE-------SIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTN-- 113
Query: 182 APALLSILLFPS-LIRGSP----SRIINVNSVMHYVG 213
              L SI       +RG       RII++ SV+   G
Sbjct: 114 ---LSSIFRXSKECVRGXXKKRWGRIISIGSVVGSAG 147

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTGSTSGIG  IA+ LA +GA++V+       A  L +  +        P ++    
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNGFG-DPAPALAEIARHGVKAVHHPADLS--- 61
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+  ++++   +E      G + +L+NNAGI  +   ++F  + +++ + +N  A    
Sbjct: 62  -DVAQIEALFALAER---EFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           + L  P +   +  RIIN+ SV   VG
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGLVG 144

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P+ +   +VT ST GIG  IAR+LA+ GAHVV++ R  +  +  +   Q E       L+
Sbjct: 11  PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG------LS 64
Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNH 180
           +      +   +   R         G + +L++NA +    G     +++ +++ + VN 
Sbjct: 65  VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 124
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYS 236
            A  L++  + P + +     ++ V+SV  Y  F +    NV       T+L+G +
Sbjct: 125 KATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNV-----SKTALLGLT 175

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG T GIG  I  + A  GA +    RN    NE + KWQ+    KG  +     +
Sbjct: 16  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK----KGFQVTGSVCD 71
Query: 127 LDLL-SLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
             L    + +++   +  G  G L +LINN G         ++ + +  H+  N  +   
Sbjct: 72  ASLRPEREKLMQTVSSMFG--GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 129
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYV 212
           LS L  P L       II ++S+   V
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVV 156

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAH-----VVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           ++TG+  GIGR IA + A +  H      V+ + +  AA+  ++K   E   +G     +
Sbjct: 6   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD--LEKISLECRAEGAL--TD 61
Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            +  D+  +  V R +     R G +  L+NNAG+   G     +++ ++  M  N    
Sbjct: 62  TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGT 121
Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
             L+  LF  + R     I  + SV     F
Sbjct: 122 FFLTQALFALMERQHSGHIFFITSVAATKAF 152

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 13  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 70
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 71  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 124
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 125 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPMVAAYSASKFA 164

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 60  LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP 119
           +P  ++ T I+TGS++GIGR  A   A+ GA+V +  R    ++E +++ ++     G+ 
Sbjct: 1   MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR----SSERLEETRQIILKSGVS 56
Query: 120 -LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQV 178
              + ++  D+ + D   +   +   + G + VL+NNAG      P  F   G ++ + +
Sbjct: 57  EKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAG---AAIPDAFGTTGTDQGIDI 113
Query: 179 NHLAPAL-------LSILLFPSLIRGSPSRIINVNSVM 209
            H    L       ++  + P L+  S   I+NV+S++
Sbjct: 114 YHKTLKLNLQAVIEMTKKVKPHLV-ASKGEIVNVSSIV 150

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 21  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 78
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 79  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 132
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 133 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPMVAAYSASKFA 172

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 28  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 85
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 86  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 139
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 140 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPMVAAYSASKFA 179

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 32  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 89
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 90  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 143
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 144 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPMVAAYSASKFA 183

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 38  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 95
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 96  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 149
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 150 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPLVAAYSASKFA 189

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 75
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 76  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 129
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 130 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPMVAAYSASKFA 169

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 19  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 76
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 77  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 130
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 131 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPMVAAYSASKFA 170

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-AANELIQKWQEE-WSGKGLPLNIEAM 125
            +VTG++ GIGR IA++LA  GA V +   N K  A E + + Q    S   +  N+E++
Sbjct: 10  ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESL 69
Query: 126 ---ELDLLSLDSVVRFSEAWNGRLGP--LHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
              E    SLD+ ++       R G     +LINNAGI      ++ ++  ++  + VN 
Sbjct: 70  HGVEALYSSLDNELQ------NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNA 123
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD 216
            AP  + I    S +R + SRIIN++S    +   D
Sbjct: 124 KAPFFI-IQQALSRLRDN-SRIINISSAATRISLPD 157

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 38  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 95
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 96  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 149
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 150 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPLVAAYSASKFA 189

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 35  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 92
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 93  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 146
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 147 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPMVAAYSASKFA 186

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKG--LPLNIEA 124
           T  +TG+TSG G   AR+ AE+G  +V+  R      E +Q    E S K   LPL ++ 
Sbjct: 23  TLFITGATSGFGEACARRFAEAGWSLVLTGRR----EERLQALAGELSAKTRVLPLTLDV 78
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAP 183
            +    S  +V    E        L  LINNAG+    +P Q    D ++  +  N    
Sbjct: 79  RDRAAXSA-AVDNLPE----EFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGL 133
Query: 184 ALLSILLFPSLI-RGSPSRIINVNSV 208
              + LL P LI  G+ + I+N+ SV
Sbjct: 134 LYSTRLLLPRLIAHGAGASIVNLGSV 159

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 32  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 89
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 90  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 143
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 144 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPMVAAYSASKFA 183

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T  VTG  +G+G  + RQL   G  V +A     + ++ +   + E SG      +  ++
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGP----EVMGVQ 65
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           LD+ S +     ++    R GP+ +L NNAG+
Sbjct: 66  LDVASREGFKMAADEVEARFGPVSILCNNAGV 97

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAH---VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           ++TG +SGIG  +A +LA   +    V   +R+LK    L   W+   +    P ++E +
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL---WEAARALACPPGSLETL 62
Query: 126 ELDLLSLDSVVRFSE-AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +LD+    SV    E    GR   + VL+ NAG+  +G  +   +D     ++VN +   
Sbjct: 63  QLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASVLEVNVVGTV 119
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
            +     P + R    R++   SV   +G 
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGL 149

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T  VTG + GIG  IA++LA  GA V +   N     + +    E+  G+ +   I A  
Sbjct: 33  TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVA--IRADN 90
Query: 127 LDLLSLDSVVRFS-EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            D  +++  +R + EA    LG L +L+N+AGI+     ++ +   ++E   VN  AP  
Sbjct: 91  RDAEAIEQAIRETVEA----LGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAP-- 144
Query: 186 LSILLFPSLIRGSPSRIINVNS 207
              +   S   G   RII + S
Sbjct: 145 FVAIRSASRHLGDGGRIITIGS 166

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E   G      I     D
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMED 75
Query: 129 LLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYE--EHMQVNHLAPAL 185
           +   +  V    A  G+L G L +LI N    +      F  D +   + M+VN L+  +
Sbjct: 76  MTFAEQFV----AQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVV 129
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           L++   P +++ S   I+ V+S               ++G+  Y  +  YS SK A
Sbjct: 130 LTVAALP-MLKQSNGSIVVVSS---------------LAGKVAYPLVAAYSASKFA 169

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 12/141 (8%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            +VTG   GIGR IA+  A  GA V +         +L  + +E     G        ++
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALC--------DLRPEGKEVAEAIGGAF----FQV 56
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           DL      VRF E     LG + VL+NNA I + G         +   ++VN  AP  LS
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116
Query: 188 ILLFPSLIRGSPSRIINVNSV 208
            L    + +     I+NV SV
Sbjct: 117 ALAAREMRKVGGGAIVNVASV 137

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAH---VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           ++TG +SGIG  +A +LA   +    V   +R+LK    L   W+   +    P ++E +
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL---WEAARALACPPGSLETL 62
Query: 126 ELDLLSLDSVVRFSE-AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +LD+    SV    E    GR   + VL+ NAG+  +G  +   +D     + VN +   
Sbjct: 63  QLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
            +     P + R    R++   SV   +G 
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGL 149

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 69  IVTGSTSGIGREIARQLAESGAH---VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           ++TG +SGIG  +A +LA   +    V   +R+LK    L   W+   +    P ++E +
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL---WEAARALACPPGSLETL 62
Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           +LD+    SV    E      G + VL+ NAG+  +G  +   +D     + VN +    
Sbjct: 63  QLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +     P + R    R++   SV   +G 
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGL 149

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELI------QKWQEEWSGKGLP 119
            T  +TG++ GIG+ IA + A+ GA++V+A +  +   +L+       +  E   GK LP
Sbjct: 46  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALP 105
Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
             +     D+     +    E    + G + +L+NNA   S+           +  M VN
Sbjct: 106 CIV-----DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVN 160
Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVMH 210
                L S    P L +   + I+N++  ++
Sbjct: 161 TRGTYLASKACIPYLKKSKVAHILNISPPLN 191

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAH---VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           ++TG +SGIG  +A +LA   +    V   +R+LK    L   W+   +    P ++E +
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL---WEAARALACPPGSLETL 62
Query: 126 ELDLLSLDSVVRFSE-AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +LD+    SV    E    GR   + VL+ NAG+  +G  +   +D     + VN +   
Sbjct: 63  QLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
            +     P + R    R++   SV   +G 
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGL 149

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAH---VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           ++TG +SGIG  +A +LA   +    V   +R+LK    L   W+   +    P ++E +
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL---WEAARALACPPGSLETL 62
Query: 126 ELDLLSLDSVVRFSE-AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +LD+    SV    E    GR   + VL+ NAG+  +G  +   +D     + VN +   
Sbjct: 63  QLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
            +     P + R    R++   SV   +G 
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGL 149

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 20/153 (13%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            I+TG T GIG  IA +  E GA V++  R+     +  +         G P  I+  + 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSV-------GTPDQIQFFQH 61
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D    D   +  +A     GP+  L+NNAGI      ++ +   + + + VN      L 
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVN------LD 115
Query: 188 ILLFPSLI-------RGSPSRIINVNSVMHYVG 213
            + F + +       +G  + IIN++S+  +VG
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG 148

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Query: 51  ASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ 110
            SH+  P         T  VTG +SGIG  +AR LA  G  V    R+ K  +  +   +
Sbjct: 18  GSHMSRPQ--------TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR 69
Query: 111 EEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGE 163
                     +++    D+ S D V     A   R GP+ +L+N+AG    GE
Sbjct: 70  AAGH------DVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE 116

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAH---VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           ++TG +SGIG  +A +LA   +    V   +R+LK    L   W+   +    P ++E +
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL---WEAARALACPPGSLETL 62
Query: 126 ELDLLSLDSVVRFSE-AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +LD+    SV    E    GR   + VL+ NAG+  +G  +   +D     + VN +   
Sbjct: 63  QLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
            +     P + R    R++   SV   +G 
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGL 149

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 20/153 (13%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            I+TG T GIG  IA +  E GA V++  R+     +  +         G P  I+  + 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV-------GTPDQIQFFQH 61
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D    D   +  +A     GP+  L+NNAGI      ++ +   + + + VN      L 
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVN------LD 115
Query: 188 ILLFPSLI-------RGSPSRIINVNSVMHYVG 213
            + F + +       +G  + IIN++S+  +VG
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG 148

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 37/178 (20%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP--LNIEAME 126
           ++TG++SGIG  IAR+ +E G  +++  R +           E      LP  L  +   
Sbjct: 20  VITGASSGIGEAIARRFSEEGHPLLLLARRV-----------ERLKALNLPNTLCAQVDV 68
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D  + D+ +  +E      GP   ++NNAG+  +G+      + ++    VN L   LL
Sbjct: 69  TDKYTFDTAITRAEKI---YGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL--GLL 123
Query: 187 S---ILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           +    +L P   R   + IIN++S               ++G++ +     Y G+K A
Sbjct: 124 NGMQAVLAPMKARNCGT-IINISS---------------IAGKKTFPDHAAYCGTKFA 165

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNL----KAANELIQKWQEEWSGKGLPLNI 122
             ++TG++ GIG  IAR LA  G  + +  R++    K A+EL+Q+   E         +
Sbjct: 26  VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE---------V 76
Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
               LD+   +SV  FS+    R G + V++ NAG+
Sbjct: 77  FYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 65  DLT---CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           DLT    +VTG+T G+G  IAR L   GA V +     +   EL  +  E          
Sbjct: 7   DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER--------- 57
Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           I     +L   ++V    +     +G + +L+NNAGI   G   + S + ++  + VN  
Sbjct: 58  IFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLT 117
Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           +   L+  L   ++R    RIIN+ S++   G
Sbjct: 118 SVFNLTRELTHPMMRRRNGRIINITSIVGVTG 149

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNL----KAANELIQKWQEEWSGKGLPLNI 122
             ++TG++ GIG  IAR LA  G  + +  R++    K A+EL+Q+   E         +
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE---------V 54
Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
               LD+   +SV  FS+    R G + V++ NAG+
Sbjct: 55  FYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 65  DLT---CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           DLT    +VTG+T G+G  IAR L   GA V +     +   EL  +  E          
Sbjct: 4   DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER--------- 54
Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           I     +L   ++V    +     +G + +L+NNAGI   G   + S + ++  + VN  
Sbjct: 55  IFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLT 114
Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           +   L+  L   ++R    RIIN+ S++   G
Sbjct: 115 SVFNLTRELTHPMMRRRNGRIINITSIVGVTG 146

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P+ D   +VTG++ GIGR IA +LA +GA V  AV    +A    +      +  G    
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKV--AVNYASSAGAADEVVAAIAAAGGEAFA 82
Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           ++A   D+     V     A   R G L VL+NNAGI       +  +D ++  + +N  
Sbjct: 83  VKA---DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLG 139
Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
              L S      +++    RIIN+ SV+  +G
Sbjct: 140 GVFLCSRAAAKIMLKQRSGRIINIASVVGEMG 171

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 57  PLPLPP----VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQE 111
           P PL P    +     +VTG+  GIGRE+A +L   G  V++   N  ++A E++   ++
Sbjct: 17  PGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK 76
Query: 112 EWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG 171
             S      +   ++ ++  ++ +VR  E      G L ++ +N+G+ S G  +  + + 
Sbjct: 77  NGS------DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE 130
Query: 172 YEEHMQVN 179
           ++    +N
Sbjct: 131 FDRVFTIN 138

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLK----AANELIQKWQEEWSGKGLPLNIEA 124
           IVTG  +GIG+ I ++L E G++VV+A R L+    AA+EL          + +P+    
Sbjct: 22  IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPI---- 77
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
            + ++ + + V    ++     G ++ L+NN G   +   +  S  G+   ++ N     
Sbjct: 78  -QCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 136
Query: 185 LLSILLFPSLIRGSPSRIINV 205
            +   ++ S ++     I+N+
Sbjct: 137 YMCKAVYSSWMKEHGGSIVNI 157

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 57  PLPLPP----VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQE 111
           P PL P    +     +VTG+  GIGRE+A +L   G  V++   N  ++A E++   ++
Sbjct: 17  PGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK 76
Query: 112 EWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG 171
             S      +   ++ ++  ++ +VR  E      G L ++ +N+G+ S G  +  + + 
Sbjct: 77  NGS------DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE 130
Query: 172 YEEHMQVN 179
           ++    +N
Sbjct: 131 FDRVFTIN 138

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTGST+GIG+ IA  L   GA+V++  R  +  NE I++ + ++    L   +  + 
Sbjct: 12  TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF 167
            +    D + ++ +        + +LINN GIF   EP ++
Sbjct: 72  TEQGCQDVIEKYPK--------VDILINNLGIF---EPVEY 101

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK--GLPLNI-EAM 125
           +VTG T GIGR IA   A +GA+V +A R+    +  +    +  SGK  G+  ++ +  
Sbjct: 14  VVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA 73
Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF 159
           + D L+  +V  F        G + V+  NAG+F
Sbjct: 74  QCDALAGRAVEEF--------GGIDVVCANAGVF 99

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            IV G T G G    R+L E GA V++  RN       I + +EE+  +     + A+  
Sbjct: 11  AIVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGPR-----VHALRS 61
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D+  L+ +     A    LG + +L  NAG+  +    + S+  Y+    VN    A  +
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKG-AFFT 120
Query: 188 ILLFPSLIR 196
           +     LIR
Sbjct: 121 VQRLTPLIR 129

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            IV G T G G    R+L E GA V++  RN       I + +EE+  +     + A+  
Sbjct: 10  AIVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGPR-----VHALRS 60
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D+  L+ +     A    LG + +L  NAG+  +    + S+  Y+    VN    A  +
Sbjct: 61  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKG-AFFT 119
Query: 188 ILLFPSLIR 196
           +     LIR
Sbjct: 120 VQRLTPLIR 128

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           +  +VTG+T+G G  I R+  + G  V+   R      E +Q+ ++E     L  N+   
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRR----QERLQELKDE-----LGDNLYIA 51
Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPA 184
           +LD+ +  ++     +       + +L+NNAG+    EP  K S + +E  +  N+    
Sbjct: 52  QLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLV 111
Query: 185 LLSILLFPSLIRGSPSRIINVNSV 208
            ++  + P ++  +   IIN+ S 
Sbjct: 112 YMTRAVLPGMVERNHGHIINIGST 135

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 33/181 (18%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG+  GIGR  A + A+  + +V+   N     E   K       KGL   +    +D
Sbjct: 35  LITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC------KGLGAKVHTFVVD 88
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGI------FSIGEPQKFSKDGYEEHMQVNHLA 182
             + + +   ++     +G + +L+NNAG+      F+  +PQ       E+  +VN LA
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQ------IEKTFEVNVLA 142
Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQ 242
               +    P++ + +   I+ V S                +G      L+ Y  SK A 
Sbjct: 143 HFWTTKAFLPAMTKNNHGHIVTVAS---------------AAGHVSVPFLLAYCSSKFAA 187
Query: 243 V 243
           V
Sbjct: 188 V 188

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            IVTG++ GIG  IA +LA  G  VV+      AA E +    E   GK L       + 
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT-----AQA 84
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           D+    +V R         G + VL+NNAGI
Sbjct: 85  DVSDPAAVRRLFATAEEAFGGVDVLVNNAGI 115

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 23/150 (15%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN--IEAME 126
           +VTG +SGIG  IA Q AE GA VV                  +  G   P +  I   E
Sbjct: 15  LVTGGSSGIGAAIAMQFAELGAEVV--------------ALGLDADGVHAPRHPRIRREE 60
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+     + R  EA    L  L VL+NNAGI    + +++    +E  +++N  A  L 
Sbjct: 61  LDITDSQRLQRLFEA----LPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLA 114
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVD 216
           S L  P L +   S I+N+ S+    G  D
Sbjct: 115 SQLARPLLAQRGGS-ILNIASMYSTFGSAD 143

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG++SGIG  IAR L + G+ V+++  N +    L    ++ ++       IE   
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT-------IEVCN 68
Query: 127 LDLLSLDSVVRFSEAWN--GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           L            E  N   +   L +L+ NAGI S     +     +++ + +N  A  
Sbjct: 69  L--------ANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANF 120
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           +L+      +I+    RIIN++S++   G
Sbjct: 121 ILNREAIKKMIQKRYGRIINISSIVGIAG 149

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 11/165 (6%)
Query: 50  LASHLQNPLPL--PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQ 107
           L +  Q P  +  P +     IVTG+ +GIG  +AR+LA+ G HV+ A  +  AA+    
Sbjct: 12  LEAQTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT 71
Query: 108 KWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF 167
           K         +     A  +D+     ++   +A     G +  L+ NAG+  +      
Sbjct: 72  K---------IGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT 122
Query: 168 SKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV 212
           + + ++  + +N     L +    P +I      I+N++S+   V
Sbjct: 123 TVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV 167

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            ++T  T G+G+++  +L   G  V +   +   A E +++     + K +   ++ ++ 
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKE-----TYKDVEERLQFVQA 64
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAG--IFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           D+   + + +  E      G +  LINNAG  +F   +   + +D + E +Q N  A   
Sbjct: 65  DVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFH 124
Query: 186 LSILLFPSLIRGSPSRIIN 204
           L  L+ P + + +  RIIN
Sbjct: 125 LLKLVVPVMRKQNFGRIIN 143

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           VTG   GIG  I ++L + G  VV         +    KW E+   K L  +  A E ++
Sbjct: 18  VTGGMGGIGTSICQRLHKDGFRVVAG---CGPNSPRRVKWLEDQ--KALGFDFYASEGNV 72
Query: 130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSIL 189
              DS  +  +     +G + VL+NNAGI      +K +++ ++  +  N  +   ++  
Sbjct: 73  GDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQ 132
Query: 190 LFPSLIRGSPSRIINVNSV 208
           +   ++     RIIN++SV
Sbjct: 133 VIDGMVERGWGRIINISSV 151

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE 111
           IVTG++ GIGRE+A  L++ GAHVV+  R+ +   +++ +  E
Sbjct: 13  IVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLE 55

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE 111
           IVTG++ GIGRE+A  L++ GAHVV+  R+ +   +++ +  E
Sbjct: 22  IVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLE 64

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
            I+TGS++GIGR  A   A  GA V +  R+   A  L +  Q+  +      N+ ++  
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRH---AERLEETRQQILAAGVSEQNVNSVVA 65
Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG-------YEEHMQVNH 180
           D+ +            G+ G L +L+NNAG      P   SK G       Y+  + +N 
Sbjct: 66  DVTTDAGQDEILSTTLGKFGKLDILVNNAG---AAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSV 208
            +   L+    P L   +   I+N++S+
Sbjct: 123 RSVIALTKKAVPHL-SSTKGEIVNISSI 149

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG  SGIG   A + A  GA +V++  +  A  + +         +G   +   + 
Sbjct: 33  AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGL------RGQGFDAHGVV 86
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKD 170
            D+  LD +VR ++     LG + V+ +NAGI   G   + + D
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD 130

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 52  SHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE 111
           SH+     +  VN  T IVTG   GIG    R +A +GA+V +  R+   A E+ +K   
Sbjct: 2   SHMAPGFTISFVNK-TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEK--- 57
Query: 112 EWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG 171
              GK   +  +A + D+ + D V +  +  +  LGP+  LI NAG+  +    + + + 
Sbjct: 58  --VGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHED 115
Query: 172 YEEHMQVN 179
           +     VN
Sbjct: 116 FAFVYDVN 123

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW-SGKGLPLNIEAME 126
            +VTG++ GIG+ IA +L   GA V+    +   A ++ +  +     G GL        
Sbjct: 30  ALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLV------- 82
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+ S +SV    E     LG   +++NNAGI       +   D + + +  N  +   L
Sbjct: 83  LDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRL 142
Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           S  +   + +    RIIN+ SV+  +G
Sbjct: 143 SKAVLRGMTKARWGRIINIGSVVGAMG 169

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   ++TG ++G+GR +A +  +  A VV+   N +      +K  EE  G+ +      
Sbjct: 15  DKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAI-----I 69
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           ++ D+   + VV   +      G L V+INNAG+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGV 103

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + ++TGS  GIGR  A      GA V +A  +++ A +   +         +     A++
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---------IGPAAYAVQ 60
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
            D+   DS+     A     G L +L+NNA +F +    + +++ YE+   +N
Sbjct: 61  XDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAIN 113

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVTGS  GIG+  A  LA  GA VV+A  N +AA E + K      G  +     ++ +D
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVVVADINAEAA-EAVAKQIVADGGTAI-----SVAVD 66
Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF----SKDGYEEHMQVNHLAPA 184
           +   +S    ++      G +  L+NNA IF  G    F      + Y++ M VN     
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFG-GMKLDFLLTIDPEYYKKFMSVNLDGAL 125
Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYV 212
             +  ++  + +     I+N +S   ++
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSSTAAWL 153

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   ++TG ++G+GR +A +  +  A VV+   N +      +K  EE  G+ +      
Sbjct: 15  DKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAI-----I 69
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           ++ D+   + VV   +      G L V+INNAG+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGV 103

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           D   ++TG ++G+GR +A +  +  A VV+   N +      +K  EE  G+ +      
Sbjct: 15  DKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAI-----I 69
Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           ++ D+   + VV   +      G L V+INNAG+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGV 103

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL-NIEAM 125
           + I+TGS++GIGR  A   A+ GA V +  RN     + +++ +++    G+P   I A+
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRN----EDRLEETKQQILKAGVPAEKINAV 83
Query: 126 ELDLLSL---DSVVRFSEAWNGRLGPLHVLINNAG 157
             D+      D ++  + A   + G + +L+NNAG
Sbjct: 84  VADVTEASGQDDIINTTLA---KFGKIDILVNNAG 115

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL-NIEAMEL 127
           +VTG+ SGIGR ++ +LA  GA V     +  AA E ++      S +G P  N  A + 
Sbjct: 11  LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQA 70
Query: 128 DLLSLDSVVRFSEAWNGRLG-PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           D+    +     E        P  V+++ AGI         S+D +++ + VN     L+
Sbjct: 71  DVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLV 130
Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVGFV 215
           +     +L+  G    IIN++S++  VG V
Sbjct: 131 TQAAAQALVSNGCRGSIINISSIVGKVGNV 160

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 17/151 (11%)
Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP---- 119
           N   C+VTG+   IG   A +LAE G  + +    L    E ++K +     KG+     
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAEEGTAIAL----LDMNREALEKAEASVREKGVEARSY 61
Query: 120 -LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQ 177
             ++ + E  + ++DSVVR         G +  L NNAG      P Q +  D +   + 
Sbjct: 62  VCDVTSEEAVIGTVDSVVR-------DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114
Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
           +N      +   +   +I  +  RI+N  S+
Sbjct: 115 INVTGAFHVLKAVSRQMITQNYGRIVNTASM 145

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK-GLPLNIEAME 126
            +VTGSTSGIG  IA  LA  GA +V+       A E I+K +   + + G+ +  +  +
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVL--NGFGDAAE-IEKVRAGLAAQHGVKVLYDGAD 63
Query: 127 LDLLS-----LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
           L         +D+ VR       ++G + +L+NNAGI      + F  + ++  + +N  
Sbjct: 64  LSKGEAVRGLVDNAVR-------QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
Query: 182 APALLSILLFPSLIRGSPSRIINVNS 207
           A    +    P + +    RIIN+ S
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIAS 142

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 68  CIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAME 126
            +VTGS  GIG  +A  L   GA VV+   N  K A +++ +       K L  +  A++
Sbjct: 21  ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI------KALGSDAIAIK 74
Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
            D+  +  +V+  +      G L + ++N+G+ S G  +  +++ ++    +N
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLN 127

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	249
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	4e-56
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-44
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-34
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-27
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-27
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	9e-27
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-26
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	6e-26
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-25
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-25
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-25
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	4e-25
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-24
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-24
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-24
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-24
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-24
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-24
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-24
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	4e-24
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	5e-24
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-23
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-23
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-23
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-23
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-23
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	5e-23
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	8e-23
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	9e-23
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-22
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-22
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-22
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-22
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-22
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-22
1spx_A	278	Short-chain reductase family member (5L265); paral	4e-22
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-22
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-22
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	6e-22
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	6e-22
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	7e-22
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-22
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-21
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-21
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-21
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-21
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-21
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-21
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-21
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-21
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-21
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	5e-21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-21
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	7e-21
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	7e-21
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-20
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-20
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-20
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-20
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-20
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-20
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-20
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-20
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-20
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-20
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-20
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-20
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-20
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	4e-20
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-20
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-20
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-20
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-20
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-20
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	7e-20
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	7e-20
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	7e-20
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	8e-20
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	8e-20
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	8e-20
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	9e-20
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	9e-20
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-19
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-19
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-19
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-19
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-19
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-19
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-19
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-19
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-19
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-19
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-19
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-19
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	3e-19
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	3e-19
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-19
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-19
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-19
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-19
4e4y_A	244	Short chain dehydrogenase family protein; structur	5e-19
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	5e-19
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	6e-19
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-19
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	6e-19
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	6e-19
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	7e-19
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	7e-19
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	8e-19
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	8e-19
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	8e-19
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	8e-19
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	9e-19
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-18
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-18
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-18
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-18
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-18
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-18
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-18
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-18
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-18
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-18
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-18
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-18
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-18
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-18
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-18
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-18
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-18
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	5e-18
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	5e-18
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-18
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	8e-18
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-18
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-17
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-17
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-17
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-17
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-17
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-17
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-17
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-17
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-17
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-17
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-17
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-17
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-17
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	4e-17
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-17
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	6e-17
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-16
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-16
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-16
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-16
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-16
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-16
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-16
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	3e-16
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-16
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-16
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	5e-16
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	5e-16
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	6e-16
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-16
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-15
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-15
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	5e-15
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	6e-15
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-14
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	3e-14
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-14
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	4e-14
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-13
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-13
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-13
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-13
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	6e-13
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-12
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-12
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-12
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	8e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-11
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-08
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	7e-08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-07
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-07
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-07
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-06
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	8e-05
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	1e-04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-04
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	3e-04
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	5e-04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	6e-04
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	6e-04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	9e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  180 bits (458), Expect = 4e-56
 Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 21/184 (11%)

Query: 60  LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP 119
           LP     T ++TG+ SG+G   AR+LA  GA V+MAVR+ +      +          + 
Sbjct: 11  LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART---------MA 61

Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
             +E  ELDL  L SV RF++  +G      VLINNAGI ++  P   + DG+E  +  N
Sbjct: 62  GQVEVRELDLQDLSSVRRFADGVSG----ADVLINNAGIMAV--PYALTVDGFESQIGTN 115

Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
           HL    L+ LL P L      R++ V+S+ H+ G ++ ED+N     R+Y+  + YS SK
Sbjct: 116 HLGHFALTNLLLPRL----TDRVVTVSSMAHWPGRINLEDLN--WRSRRYSPWLAYSQSK 169

Query: 240 LAQV 243
           LA +
Sbjct: 170 LANL 173

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  149 bits (379), Expect = 2e-44
 Identities = 45/204 (22%), Positives = 69/204 (33%), Gaps = 35/204 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTG   GIG  I R L       VV+  R++      +Q+ Q E       L+    
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE------GLSPRFH 59

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           +LD+  L S+    +      G L VL+NNAGI              E  M+ N      
Sbjct: 60  QLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 119

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVD--------------------------TED 219
           +   L P LI+    R++NV+S+M                                  ED
Sbjct: 120 VCTELLP-LIKPQG-RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177

Query: 220 MNVVSGRRKYTSLMGYSGSKLAQV 243
                 +++      Y  +K+   
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVT 201

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  125 bits (314), Expect = 1e-34
 Identities = 42/236 (17%), Positives = 80/236 (33%), Gaps = 64/236 (27%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG   GIG EI +QL+ +G  VV+  R++   +E ++K +          N+   +
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS-----NHENVVFHQ 68

Query: 127 LDLLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIG----------------------- 162
           LD+    + +   ++      G L +L+NNAG+                           
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 163 -------EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG-- 213
                  E    + +  EE +++N+     ++ +L P L      RI+NV+S    +   
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 214 --------------------------FVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
                                      +     N++      +    Y+ SK    
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  104 bits (263), Expect = 2e-27
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 13/152 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG + GIG  I  +LA  GA V    RN K  +E ++ W+E    KG  LN+E   
Sbjct: 23  TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE----KG--LNVEGSV 76

Query: 127 LDLLSLDSVVRF----SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
            DLLS     +     +  ++G+   L++L+NNAG+    E + F++  Y   M  N  A
Sbjct: 77  CDLLSRTERDKLMQTVAHVFDGK---LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 133

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
              LS + +P L       +I ++S+  +   
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL 165

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  104 bits (262), Expect = 2e-27
 Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG + GIG  I  +LA  GA V    RN K  N+ + +W+     KG    +EA  
Sbjct: 11  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS----KG--FKVEASV 64

Query: 127 LDLLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            DL S        +   N   G L++L+NNAGI    E + ++ + Y   M +N  A   
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 124

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           LS+L  P L       ++ ++SV   +  
Sbjct: 125 LSVLAHPFLKASERGNVVFISSVSGALAV 153

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  103 bits (259), Expect = 9e-27
 Identities = 38/182 (20%), Positives = 78/182 (42%), Gaps = 21/182 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TGS+SGIG  IA   A+ GAH+V+  R +   +E  +  +E++  +     +  + 
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR-----VLEVA 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+ + + V    E+     G   +L+NNAG  S     + + + ++ + ++  +A   L
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRL 123

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLE 246
           +  L P +       II+  S               +   +       Y+ +K A +   
Sbjct: 124 ARGLVPGMRARGGGAIIHNAS---------------ICAVQPLWYEPIYNVTKAALMMF- 167

Query: 247 TK 248
           +K
Sbjct: 168 SK 169

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  100 bits (252), Expect = 5e-26
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 15/151 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIGR   + L  +GA VV   R     + L+++        G    IE + 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE------CPG----IEPVC 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +DL   ++  R   +    +GP+ +L+NNA +  +    + +K+ ++   +VN  A   +
Sbjct: 59  VDLGDWEATERALGS----VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVGFVD 216
           S ++   LI RG P  I+NV+S        +
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTN 145

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  100 bits (252), Expect = 6e-26
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 15/151 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIGR+  + L  SGA VV   R       L ++        G    IE + 
Sbjct: 9   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE------CPG----IEPVC 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +DL   D+  +        +GP+ +L+NNA +  +    + +K+ ++    VN  +   +
Sbjct: 59  VDLGDWDATEKALGG----IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 114

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVGFVD 216
           S ++   +I RG P  I+NV+S++ +V F +
Sbjct: 115 SQMVARDMINRGVPGSIVNVSSMVAHVTFPN 145

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  100 bits (252), Expect = 1e-25
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 13/152 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG + GIG+ IA+ L E+GA V +  R+ +A  +         S  G   + +A+ 
Sbjct: 31  IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADT----ATRLSAYG---DCQAIP 83

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            DL S     R ++A       L +L+NNAG  S G   + +   G+E+ MQ+N  +   
Sbjct: 84  ADLSSEAGARRLAQALGELSARLDILVNNAGT-SWGAALESYPVSGWEKVMQLNVTSVFS 142

Query: 186 LSILLFPSLIRG----SPSRIINVNSVMHYVG 213
               L P L R     +P+R+IN+ SV     
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISA 174

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  100 bits (251), Expect = 1e-25
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 6/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+T GIG +IAR  A +GA +V++ R++   +   +   E++           + 
Sbjct: 22  RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVH-----TVA 76

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +DL   D+    +       G L VL+NNAGI             ++  + VN  APALL
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALL 136

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVG 213
           +  +  +++  G    II V S      
Sbjct: 137 ASAVGKAMVAAGEGGAIITVASAAALAP 164

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 99.6 bits (249), Expect = 2e-25
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 4/142 (2%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG +SGIG      L E+GA V    R+ +         ++ + G      + A  
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG----ARLFASV 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+L    V  F+EA    LG   +L+NNAG   +    + + + + E +Q+   +    
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHP 125

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
                P L   + + I+ VNS+
Sbjct: 126 VRAFLPQLESRADAAIVCVNSL 147

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 99.3 bits (248), Expect = 4e-25
 Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 21/179 (11%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           +     IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E  +        
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-----A 80

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
             +   +  +    +F       +G L +LI N    +             + M+VN L+
Sbjct: 81  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 140

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
             +L++   P L + +   I+ V+S+                G+  Y  +  YS SK A
Sbjct: 141 YVVLTVAALPMLKQSN-GSIVVVSSLA---------------GKVAYPMVAAYSASKFA 183

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 98.0 bits (245), Expect = 1e-24
 Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 7/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG T GIG  I  + A  GA +    RN    NE + KWQ+    KG    +    
Sbjct: 16  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK----KG--FQVTGSV 69

Query: 127 LDLLSLDSVVRFSEAWNGRLG-PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            D        +  +  +   G  L +LINN G         ++ + +  H+  N  +   
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 129

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVG 213
           LS L  P L       II ++S+   V 
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVS 157

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 97.5 bits (244), Expect = 1e-24
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 7/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTGS  G+G   A  LA +GA V++         E      +  + KG   +   + 
Sbjct: 11  TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAES----VDTLTRKG--YDAHGVA 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+    ++       +     + +LINNAGI       +   + +++ +  N  +  L+
Sbjct: 65  FDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLV 124

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVG 213
           S      +I R S  +IIN+ S+     
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAA 152

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 96.9 bits (242), Expect = 2e-24
 Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 29/175 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+T G+G EI + L+       +  RN +    L +              +E +E
Sbjct: 7   IAVVTGATGGMGIEIVKDLSRDHIVYALG-RNPEHLAALAEI-----------EGVEPIE 54

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D++         +     L  +  L++ A +      +  S   +  H+ +N + PA L
Sbjct: 55  SDIVKEVLEEGGVDKLK-NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           S  L P+L   S   +I +NS                +G   +     Y+ SK A
Sbjct: 114 SRQLLPALRAAS-GCVIYINS---------------GAGNGPHPGNTIYAASKHA 152

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 97.3 bits (243), Expect = 2e-24
 Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 4/149 (2%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TGSTSGIG  IAR LA++GA++V+           +       S       +    
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS----GTVLHHP 82

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+     +         R G   +L+NNAG+  + + + F  + ++  + VN  +    
Sbjct: 83  ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHT 142

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFV 215
                P + +    RIIN+ S    V   
Sbjct: 143 IRGAIPPMKKKGWGRIINIASAHGLVASP 171

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 96.1 bits (240), Expect = 3e-24
 Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 10/148 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG+ SG+GR +   L E G  V M  R  +   +             L   +  + 
Sbjct: 5   HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELL---------LGNAVIGIV 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL   + V     A     G   ++++ AG    G    ++ +     M+ N ++  L+
Sbjct: 56  ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILV 115

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +      +       + NV S    VG 
Sbjct: 116 AQQTVRLIGERG-GVLANVLSSAAQVGK 142

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 96.5 bits (241), Expect = 3e-24
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTGST+GIG+ IA  L   GA+V++  R  +  NE I++ + +     +   + A  
Sbjct: 12  TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ-YPDAILQPVVA-- 68

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL +        E +      + +LINN GIF   E      + + +  +VN ++   L
Sbjct: 69  -DLGTEQGCQDVIEKY----PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRL 123

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           +      +I     R+I + S 
Sbjct: 124 TRSYLKKMIERKEGRVIFIASE 145

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 96.1 bits (240), Expect = 4e-24
 Identities = 26/143 (18%), Positives = 57/143 (39%), Gaps = 5/143 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VT  +SG+G   A +LA +GA +++  RN +       +     SG      ++ + 
Sbjct: 9   LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGA----QVDIVA 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+     + R  E     LG   +L+ + G    G   +   + ++E  ++   +   +
Sbjct: 65  GDIREPGDIDRLFEK-ARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWV 123

Query: 187 SILLFPSLIRGSPSRIINVNSVM 209
                  ++     R++ + SV 
Sbjct: 124 GRRAAEQMVEKGWGRMVYIGSVT 146

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 96.5 bits (241), Expect = 4e-24
 Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 21/176 (11%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++ GIG  +AR L + G  VV   R +      I++   E    G P  +     D
Sbjct: 36  LVTGASGGIGAAVARALVQQGLKVVGCARTV----GNIEELAAECKSAGYPGTLIPYRCD 91

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L + + ++    A   +   + + INNAG+         S  G+++   VN LA ++ + 
Sbjct: 92  LSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTR 151

Query: 189 LLFPSLIRGSPSR--IINVNSVM-HYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
             + S+   +     IIN+NS+  H V  +     +             YS +K A
Sbjct: 152 EAYQSMKERNVDDGHIININSMSGHRV--LPLSVTHF------------YSATKYA 193

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 95.8 bits (239), Expect = 5e-24
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 6/150 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTGSTSGIG  IA  LA  GA +V+    +     ++      +   K L       
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVL-----YD 60

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
             DL   ++V    +    ++G + +L+NNAGI      + F  + ++  + +N  A   
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFV 215
            +    P + +    RIIN+ S    V   
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASA 150

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 95.0 bits (237), Expect = 1e-23
 Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 11/172 (6%)

Query: 43  EMLFQRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAA 102
           E L+ +        P     V     ++TG+  GIGR  A + A+  + +V+   N    
Sbjct: 14  ENLYFQGH-----MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL 68

Query: 103 NELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG 162
            E   K       KGL   +    +D  + + +   ++     +G + +L+NNAG+    
Sbjct: 69  EETAAKC------KGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 122

Query: 163 EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +         E+  +VN LA    +    P++ + +   I+ V S   +V  
Sbjct: 123 DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV 174

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 94.1 bits (235), Expect = 2e-23
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 6/150 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLP-LNIEAM 125
             +VTG+  GIG   AR  A  GA VV+  R   +  E+     ++    G P   I A+
Sbjct: 16  VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEV----SDQIKSAGQPQPLIIAL 71

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPA 184
            L+  +       +       G L  L++NA I     P ++   + + + M VN  A  
Sbjct: 72  NLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATF 131

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +L+  L P L R   + I   +S +   G 
Sbjct: 132 MLTRALLPLLKRSEDASIAFTSSSVGRKGR 161

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 94.1 bits (235), Expect = 2e-23
 Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 61  PPVNDL---TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKG 117
           P  + L     +VTG++ GIGRE A   A  GA V++  RN +   ++     EE    G
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE---TG 61

Query: 118 LPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHM 176
                  ++L   + ++  + ++        L  +++NAG+     P  + +   +++ M
Sbjct: 62  RQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVM 121

Query: 177 QVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           QVN  A  +L+  L P L++     ++  +S +   G 
Sbjct: 122 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR 159

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 94.2 bits (235), Expect = 2e-23
 Identities = 26/142 (18%), Positives = 59/142 (41%), Gaps = 12/142 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++  +G   A +L E G  V+++ R   A+   +++               A+ 
Sbjct: 29  PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ-----------AGAVALY 77

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D      ++ F +    +   L  +++NA  + + E      D +     V+ LAP L+
Sbjct: 78  GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEW-LAETPGEEADNFTRMFSVHMLAPYLI 136

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           ++   P L     + I++++  
Sbjct: 137 NLHCEPLLTASEVADIVHISDD 158

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 93.8 bits (234), Expect = 4e-23
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 5/148 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
              +TG  SGIG  IA      G H V+A R+L       +K       + L      + 
Sbjct: 29  VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCL-----PLS 83

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+ +  +V+   +      G + +LIN A    +      S + ++  M ++      +
Sbjct: 84  MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNV 143

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           S +L+    R     I+N+ + +   G 
Sbjct: 144 SRVLYEKFFRDHGGVIVNITATLGNRGQ 171

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 92.6 bits (231), Expect = 5e-23
 Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++ GIG  IAR LA  G  + +  R++    ++  +  +E   +     +    
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE-----VFYHH 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+   +SV  FS+    R G + V++ NAG+      ++ S++ + E ++VN L     
Sbjct: 59  LDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRT 118

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
                 SL R     ++  + V                  R      GY  +K A
Sbjct: 119 LKAFLDSLKRTGGLALVTTSDV----------------SARLIPYGGGYVSTKWA 157

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 92.8 bits (231), Expect = 8e-23
 Identities = 35/185 (18%), Positives = 63/185 (34%), Gaps = 31/185 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAE---SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
            C++TG++ G GR +A QLA     G+ ++++ R+     +L    +EE   +   L + 
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQL----KEELGAQQPDLKVV 63

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGP----LHVLINNAGIFSIGEPQKF---SKDGYEEHM 176
               DL +   V R   A      P      +LINNA                     + 
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 177 QVNHLAPALLSILLFPSLI--RGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMG 234
            +N  +   L+     +     G    ++N++S               +   + Y     
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS---------------LCALQPYKGWGL 168

Query: 235 YSGSK 239
           Y   K
Sbjct: 169 YCAGK 173

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 91.5 bits (228), Expect = 9e-23
 Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 21/149 (14%)

Query: 66  LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           +  ++TG+T G+G   AR L   G  ++++ R   A  EL      E   + LP      
Sbjct: 1   MRVLITGATGGLGGAFARALK--GHDLLLSGRRAGALAEL----AREVGARALPA----- 49

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
             DL          E      GPL +L++  G       ++  +D  EE +  + L  A 
Sbjct: 50  --DLADELEAKALLEEA----GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA- 102

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
               +         +R +   +   YV  
Sbjct: 103 ---FVLKHARFQKGARAVFFGAYPRYVQV 128

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 93.2 bits (232), Expect = 1e-22
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 7/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG  SGIG   A + A  GA +V++  +  A  + +        G+G       + 
Sbjct: 33  AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAV----NGLRGQGFD--AHGVV 86

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+  LD +VR ++     LG + V+ +NAGI   G   + + D +   + ++       
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHA 146

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVGF 214
                P L+ +G+   I    S    V  
Sbjct: 147 VEAFLPRLLEQGTGGHIAFTASFAGLVPN 175

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 92.6 bits (231), Expect = 1e-22
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG + G+G  IA+ LAE+G  VV+A RNL+ A+E  QK  E++  + +     A  
Sbjct: 23  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETM-----AFR 77

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+ + + V +  EA   + G L  ++N AGI      ++F  D + + ++VN      +
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYV 137

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
               F  L       IIN+ S+     
Sbjct: 138 CREAFSLLRESDNPSIINIGSLTVEEV 164

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 91.6 bits (228), Expect = 1e-22
 Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 25/159 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           + +VTG+  GIG  + +QL +     H++   R+++ A EL                +  
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---------KDSRVHV 55

Query: 125 MELDLLSLDSVVRFSEAWNGRLG--PLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHL 181
           + L +    S+  F       +G   L +LINNAG+  S G   + ++    E + VN  
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 182 APALLSILLFPSLIRG-----------SPSRIINVNSVM 209
           +  LL+  L P L              S + +I ++S +
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL 154

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 92.9 bits (231), Expect = 2e-22
 Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T  VTG  +G+G  + RQL   G  V +A     + ++           +G    +  ++
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKA----LATLEAEGSGPEVMGVQ 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HL 181
           LD+ S +     ++    R GP+ +L NNAG+      ++ S D ++  + VN     + 
Sbjct: 66  LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNG 125

Query: 182 APALLSILL-FPSLIRGSPSRIINVNSV 208
               +  ++            ++N  S+
Sbjct: 126 VTTFVPRMVERVKAGEQKGGHVVNTASM 153

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 91.5 bits (228), Expect = 2e-22
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 8/149 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTGSTSGIG  IA+ LA +GA++V+      A              K +        
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAP---ALAEIARHGVKAV-----HHP 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL  +  +           G + +L+NNAGI  +   ++F  + +++ + +N  A    
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFV 215
           + L  P +   +  RIIN+ SV   VG  
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGLVGST 146

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 90.6 bits (226), Expect = 3e-22
 Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 40/192 (20%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG T GIG  IA +  E GA V++  R+     +      +          I+  +
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA----KSVGTPD---QIQFFQ 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN------- 179
            D    D   +  +A     GP+  L+NNAGI      ++ +   + + + VN       
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 180 --HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSG 237
                  + +        +G  + IIN++S+  +VG                  L  Y+ 
Sbjct: 121 TRLGIQRMKN--------KGLGASIINMSSIEGFVGDPS---------------LGAYNA 157

Query: 238 SKLAQVKLETKN 249
           SK A V++ +K+
Sbjct: 158 SKGA-VRIMSKS 168

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 91.1 bits (227), Expect = 4e-22
 Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 22/177 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TGS++GIGR  A   A  GA V +  R+ +   E  Q+            N+ ++ 
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAA---GVSEQNVNSVV 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQK----FSKDGYEEHMQVNHLA 182
            D+ +            G+ G L +L+NNAG        K     S + Y+  + +N  +
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
              L+    P L       I+N++S              + SG         YS +K
Sbjct: 125 VIALTKKAVPHLSSTK-GEIVNISS--------------IASGLHATPDFPYYSIAK 166

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 91.5 bits (228), Expect = 5e-22
 Identities = 25/148 (16%), Positives = 58/148 (39%), Gaps = 6/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
              +TG  +G+G+ +   L+  GA  V+A R +       ++   +   K   +     +
Sbjct: 28  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAI-----Q 82

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   D V           G  +++INNA    I   ++ S + ++    +     A +
Sbjct: 83  CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFV 142

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVG 213
           ++ +   LI     +  +++ ++    G
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETG 170

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 90.8 bits (226), Expect = 5e-22
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 8/151 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG  +G+GR IA+ L+  G  VV+  R     +    +               A+ 
Sbjct: 35  IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVR-----AVV 89

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+   D V     A       L +L+NNAG      P ++ + + +   +  N     L
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFL 149

Query: 186 LSILLFPSLIRGSPS--RIINVNSVMHYVGF 214
            +   F  +   +P   RIIN  S+      
Sbjct: 150 CTQHAFRMMKAQTPRGGRIINNGSISAQTPR 180

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 90.0 bits (224), Expect = 6e-22
 Identities = 33/148 (22%), Positives = 51/148 (34%), Gaps = 7/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T  V G+   IG EIA++ A  G  V    RN +    L+     E    G    I A  
Sbjct: 9   TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV----AEIEAAG--GRIVARS 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD  + D V  F  A +    PL V I N G        + +   + +  ++   A  + 
Sbjct: 63  LDARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVS 121

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
                  ++     +I    +     G 
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRGG 149

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 90.4 bits (225), Expect = 6e-22
 Identities = 43/151 (28%), Positives = 62/151 (41%), Gaps = 12/151 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG+ SG+GR +A  LA +G  V +A R L A  E       E     L      + 
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA----AEIGDDAL-----CVP 80

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+   DSV     A   + G + VL NNAG  +   P +  +   +++ +  N   P L
Sbjct: 81  TDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFL 140

Query: 186 LSILLFPSLIRGSPS--RIINVNSVMHYVGF 214
            +   F  +    P   RIIN  S+      
Sbjct: 141 CTQEAFRVMKAQEPRGGRIINNGSISATSPR 171

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 90.2 bits (225), Expect = 7e-22
 Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VT ST GIG  IAR+LA+ GAHVV++ R  +  +  +        G+G  L++    
Sbjct: 16  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV----ATLQGEG--LSVTGTV 69

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
             +   +   R         G + +L++NA +          +++ +++ + VN  A  L
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 129

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           ++  + P + +     ++ V+SV  Y  F
Sbjct: 130 MTKAVVPEMEKRGGGSVLIVSSVGAYHPF 158

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 90.3 bits (225), Expect = 8e-22
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+ SGIGR IA   A +GAHV+   R      E+  +  +         + EA+  D
Sbjct: 35  VVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIAD------GGGSAEAVVAD 87

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           L  L+     +E        + VL+NNAGI +    ++ S   + E + VN  A  +LS 
Sbjct: 88  LADLEGAANVAEELA-ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSR 146

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGFV 215
               +++     RI+ + S++ + G  
Sbjct: 147 SFGTAMLAHGSGRIVTIASMLSFQGGR 173

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 22/177 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T I+TGS++GIGR  A   A+ GA+V +  R+ +   E  Q   +    +    ++ A  
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVA-- 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG----YEEHMQVNHLA 182
            D+ + D   +   +   + G + VL+NNAG            D     Y + +++N  A
Sbjct: 66  -DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
              ++  + P L+      I+NV+S              +V+G +     + Y+ +K
Sbjct: 125 VIEMTKKVKPHLVASK-GEIVNVSS--------------IVAGPQAQPDFLYYAIAK 166

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 89.5 bits (223), Expect = 1e-21
 Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 35/179 (19%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + ++TGS  GIGR  A      GA V +A  +++ A +       E           A++
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAA----AEIGPAAY-----AVQ 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+   DS+     A     G L +L+NNA +F +    + +++ YE+   +N     + 
Sbjct: 61  MDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAIN-----VA 115

Query: 187 SILLF-----PSLI-RGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
             L         +I +G   +IIN+ S                +GRR    +  Y  +K
Sbjct: 116 GTLFTLQAAARQMIAQGRGGKIINMAS---------------QAGRRGEALVAIYCATK 159

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 89.1 bits (222), Expect = 2e-21
 Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 11/148 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IV G T G+G    R+L E GA V++  RN      + ++             + A+ 
Sbjct: 10  KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---------FGPRVHALR 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+  L+ +     A    LG + +L  NAG+  +    + S+  Y+    VN       
Sbjct: 61  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFT 120

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
              L P +  G    I+  +SV    G 
Sbjct: 121 VQRLTPLIREG--GSIVFTSSVADEGGH 146

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 88.7 bits (221), Expect = 2e-21
 Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 7/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG +SG+G+ +A + A+ GA VV+  R  +   E   + ++   G+ L      ++
Sbjct: 8   VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PGQIL-----TVQ 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+ + D + +  E  + + G + +LINNA    I   +  S +G+   + +        
Sbjct: 62  MDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVGF 214
           S  +    I +G    IIN+ +   +   
Sbjct: 122 SQAIGKYWIEKGIKGNIINMVATYAWDAG 150

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 89.2 bits (222), Expect = 2e-21
 Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 24/198 (12%)

Query: 47  QRILASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELI 106
                 H    +P       T  +TG+TSG G   AR+ AE+G  +V+  R      E +
Sbjct: 3   SHHHHHHSSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRRE----ERL 58

Query: 107 QKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-Q 165
           Q    E S K     +  + LD+    ++    +        L  LINNAG+    +P Q
Sbjct: 59  QALAGELSAKT---RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQ 115

Query: 166 KFSKDGYEEHMQVNHLAPALLSILLFPSLI-RGSPSRIINVNSVMHYVGFVDTEDMNVVS 224
               D ++  +  N       + LL P LI  G+ + I+N+ S               V+
Sbjct: 116 SCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS---------------VA 160

Query: 225 GRRKYTSLMGYSGSKLAQ 242
           G+  Y     Y G+K   
Sbjct: 161 GKWPYPGSHVYGGTKAFV 178

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 89.6 bits (223), Expect = 2e-21
 Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 20/175 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + I+TGS++GIGR  A   A+ GA V +  RN     E  Q+  +          + A  
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVA-- 85

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG--EPQKFSKDGYEEHMQVNHLAPA 184
            D+               + G + +L+NNAG              + Y++  ++N  A  
Sbjct: 86  -DVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
            ++      LI+     I+NV+S              +V+G + ++    Y+ +K
Sbjct: 145 EMTQKTKEHLIKTK-GEIVNVSS--------------IVAGPQAHSGYPYYACAK 184

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 88.8 bits (221), Expect = 3e-21
 Identities = 28/149 (18%), Positives = 62/149 (41%), Gaps = 8/149 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +++G    +G  +AR+ AE GA +V+A R ++   ++ ++  +    + L     ++ 
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRAL-----SVG 66

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+     V    +      G + V+INNA      +P    + +   + +++       
Sbjct: 67  TDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALR 126

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           L     P+L       ++NVNS++     
Sbjct: 127 LIQGFTPALEESK-GAVVNVNSMVVRHSQ 154

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 89.5 bits (222), Expect = 4e-21
 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 11/149 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ------EEWSGKGLPL 120
           T  +TG++ GIG+ IA + A+ GA++V+A +  +   +L+          E   GK LP 
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC 106

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
                 +D+     +    E    + G + +L+NNA   S+           +  M VN 
Sbjct: 107 -----IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNT 161

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVM 209
               L S    P L +   + I+N++  +
Sbjct: 162 RGTYLASKACIPYLKKSKVAHILNISPPL 190

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 87.6 bits (218), Expect = 5e-21
 Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 19/175 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG++ GIG  IA  LA  G  VV+  R+ +   ++  +                + 
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRS---NKHVQEPIVLP 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+          +  + + G + +L+N A +F  G       D + + M++N +A   +
Sbjct: 66  LDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDG-SLSEPVDNFRKIMEINVIAQYGI 124

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
              +   +       I NV S                + +  +     Y  +K A
Sbjct: 125 LKTVTEIMKVQKNGYIFNVAS---------------RAAKYGFADGGIYGSTKFA 164

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 88.1 bits (219), Expect = 5e-21
 Identities = 28/154 (18%), Positives = 61/154 (39%), Gaps = 11/154 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ------EEWSGKGLPL 120
           T  ++G + GIG  IA+++A  GA+V +  ++ +   +L           EE  G+ LP+
Sbjct: 11  TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI 70

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
                  D+   D+V         + G + + +NNA   ++G  ++     ++    +  
Sbjct: 71  -----VGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQV 125

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
                +S    P +       I+ ++  +     
Sbjct: 126 RGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK 159

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 87.6 bits (218), Expect = 7e-21
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 20/154 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG + GIG  IAR L ++GA V +A  ++ AA  ++          G      A+E
Sbjct: 14  KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV----AGLENGGF-----AVE 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+    SV    +     LG   +L  NAG+ ++      + + ++ +  VN       
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVN-----AR 119

Query: 187 SILLF-----PSLI-RGSPSRIINVNSVMHYVGF 214
            + L         +   +   I+N  S+   VG 
Sbjct: 120 GVFLANQIACRHFLASNTKGVIVNTASLAAKVGA 153

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 87.2 bits (217), Expect = 7e-21
 Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 7/147 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG+ +GIG+EIA   A +GA VV++  N  AAN ++ + Q+   G+       A  
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAF-----ACR 66

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+ S   +   ++    +LG + +L+NNAG     +P       +    ++N  +   L
Sbjct: 67  CDITSEQELSALADFAISKLGKVDILVNNAGG-GGPKPFDMPMADFRRAYELNVFSFFHL 125

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           S L+ P + +     I+ + S+     
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENK 152

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 86.8 bits (216), Expect = 1e-20
 Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 9/149 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             IVTG++ GIG  IA +LA  G  VV+       AA E+  K  E   GK L       
Sbjct: 29  VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKI-EAAGGKAL-----TA 82

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           + D+    +V R         G + VL+NNAGI  +    +     ++  + VN      
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFN 142

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
                   L  G   RIIN+++    +  
Sbjct: 143 TLREAAQRLRVG--GRIINMSTSQVGLLH 169

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 86.9 bits (216), Expect = 1e-20
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 8/149 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + +VTG T GIGR IA   A +GA+V +A R+    +  +    +  SGK +      ++
Sbjct: 12  SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVI-----GVQ 66

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+         +       G + V+  NAG+F        + +       VN       
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYA 126

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFV 215
                 +LI     R++  +S+    G +
Sbjct: 127 VQACLDALIASGSGRVVLTSSI---TGPI 152

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 86.4 bits (215), Expect = 1e-20
 Identities = 22/151 (14%), Positives = 40/151 (26%), Gaps = 17/151 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VT +    G      L + G  VV    +   A E  +               E   
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF------------ESENPG 50

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH----MQVNHLA 182
              L+     R  +A       +  +++N  I          +   E       +   + 
Sbjct: 51  TIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPL-EGTSEADIRQMFEALSIF 109

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           P LL       L     + +I + S +    
Sbjct: 110 PILLLQSAIAPLRAAGGASVIFITSSVGKKP 140

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 86.8 bits (216), Expect = 2e-20
 Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 11/148 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+TSGIG   A++    GA V +  R     +  I +         +      ++
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---------IGGGAVGIQ 81

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D  +L  + R  E      G + VL  NAG  S+    + +++ Y++    N       
Sbjct: 82  ADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFT 141

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
                P L RG  S ++   S     G 
Sbjct: 142 VQKALPLLARG--SSVVLTGSTAGSTGT 167

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 86.4 bits (215), Expect = 2e-20
 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 7/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+++GIG+++A   AE+GA V +A R+  A   +     +E +G G       + 
Sbjct: 34  RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVV----ADEIAGVG--GKALPIR 87

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   D V    +   G LG + + + NAGI S+        + ++     N     L 
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLT 147

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVG 213
           +     +++ +G    II   S+  ++ 
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHII 175

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 86.4 bits (215), Expect = 2e-20
 Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 27/160 (16%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           N   CIVTG  SGIGR  A   A++GA+VV+A  N  AA  +  +         +     
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---------IGSKAF 76

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN---- 179
            + +D+ S        E    + G + VL+NNAG  + G      ++ ++  M VN    
Sbjct: 77  GVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGI 136

Query: 180 -----HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
                ++ P +           G  S IIN  S       
Sbjct: 137 FLCSKYVIPVMRR--------NGGGS-IINTTSYTATSAI 167

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 86.5 bits (215), Expect = 2e-20
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 23/174 (13%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           T  VTG + GIG  IA++LA  GA V +  V   + A  ++ +  E+  G+ +     A+
Sbjct: 33  TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI-EQAGGRAV-----AI 86

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
             D    +++ +        LG L +L+N+AGI+     ++ +   ++E M VN  AP +
Sbjct: 87  RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFV 146

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
                   L  G   RII + S               ++    +  +  YS SK
Sbjct: 147 AIRSASRHLGDG--GRIITIGS--------------NLAELVPWPGISLYSASK 184

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 85.6 bits (213), Expect = 3e-20
 Identities = 44/198 (22%), Positives = 71/198 (35%), Gaps = 46/198 (23%)

Query: 64  NDL---TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           NDL   T I+TG   G+G E ARQ   +GA VV+A    +      ++         L  
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---------LGD 51

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN- 179
                 LD+   +   R         G +  L+NNAGI +    +  S + + + +++N 
Sbjct: 52  AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINL 111

Query: 180 --------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTS 231
                    + PA+           G  S I+N++S    +G                  
Sbjct: 112 TGVFIGMKTVIPAMKD--------AGGGS-IVNISSAAGLMGLAL--------------- 147

Query: 232 LMGYSGSKLAQVKLETKN 249
              Y  SK   V+  +K 
Sbjct: 148 TSSYGASKWG-VRGLSKL 164

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 85.6 bits (213), Expect = 3e-20
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 25/152 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+T +  GIG+  A   A  GA V+    N     EL +              I+   
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----------PGIQTRV 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+     + +F+         L VL N AG    G      +  ++  M +N     + 
Sbjct: 57  LDVTKKKQIDQFANEV----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLN-----VR 107

Query: 187 SILLF-----PSLIRGSPSRIINVNSVMHYVG 213
           S+ L      P ++      IIN++SV   V 
Sbjct: 108 SMYLMIKAFLPKMLAQKSGNIINMSSVASSVK 139

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 4/149 (2%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG  SGIG+ +A  L  +GA V++  RN       +Q+ +           I    
Sbjct: 13  TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEAL---GANGGAIRYEP 69

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+ + D   R  +A     G LH +++ AG      P  +   + +   + +N      
Sbjct: 70  TDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMY 129

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +       ++RG     + ++S+      
Sbjct: 130 VLKHAAREMVRGGGGSFVGISSIAASNTH 158

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 85.9 bits (213), Expect = 3e-20
 Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 24/160 (15%)

Query: 67  TCIVTGSTSGIGREIARQLA---ESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           + ++TG   G+G  + + L    +   H+    RN + A EL     E+ +      NI 
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-----EDLAKNH--SNIH 75

Query: 124 AMELDLLSLDSVVRFSEAWNGRLG--PLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNH 180
            +E+DL + D+  +      G      L+VL NNAGI                + +Q N 
Sbjct: 76  ILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNT 135

Query: 181 LAPALLSILLFPSLIRGS-----------PSRIINVNSVM 209
           + P +L+    P L + +            + IIN++S++
Sbjct: 136 VVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 85.4 bits (212), Expect = 3e-20
 Identities = 17/183 (9%), Positives = 49/183 (26%), Gaps = 37/183 (20%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V G +  +G E+ +       + +          +                   +  
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------------------HSFT 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
           +     + +    E  N +   +   +  AG +S G           +  + +N  +   
Sbjct: 66  IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFA 125

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
            + +    L +G     +   +                +   + + ++ Y  +K A   +
Sbjct: 126 SAHIGAKLLNQG--GLFVLTGA---------------SAALNRTSGMIAYGATKAATHHI 168

Query: 246 ETK 248
             K
Sbjct: 169 -IK 170

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 26/169 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             ++TG    IG  IA +L + G  VV+    +  AA  L+ +     +G  +       
Sbjct: 13  AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAV-----LC 67

Query: 126 ELDLLSLDSVVRFSEAW----NGRLGPLHVLINNAGIF-----------SIGEPQKFSKD 170
           + DL    S++   E          G   VL+NNA  +           +     K    
Sbjct: 68  KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDA 127

Query: 171 GYEEHMQVNHLAP-----ALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
              E    N +AP     A           R     ++N+   M  +  
Sbjct: 128 QVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL 176

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 85.4 bits (212), Expect = 4e-20
 Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 16/162 (9%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P+N   C+VTG++ GIGR IA QL ++GA V +  R+L     + Q+  +   G+ +   
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQE-AQSLGGQCV--- 57

Query: 122 IEAMELDLLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSK-------DGYE 173
              +  D      V   F +    + G L VL+NNA           +K         ++
Sbjct: 58  --PVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 115

Query: 174 EHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV--MHYVG 213
           +   V        S+     ++      I+ ++S   + Y+ 
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF 157

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 85.3 bits (212), Expect = 4e-20
 Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 31/180 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++ GIG  IAR+L  +GA +++  R        I+    E    G      A  
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARRQ----ARIEAIATEIRDAG--GTALAQV 59

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HL 181
           LD+    SV  F++A     G + VL+NNAG+  +        D +E  + VN       
Sbjct: 60  LDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWG 119

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
             A+L     P +      +IIN+ S               +       +   Y  +K A
Sbjct: 120 IGAVL-----PIMEAQRSGQIINIGS---------------IGALSVVPTAAVYCATKFA 159

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 86.2 bits (214), Expect = 4e-20
 Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 10/152 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNL----KAANELIQKWQEEWSGKGLPLNI 122
             IVTG  +GIG+ I ++L E G++VV+A R L     AA+EL          + +P+  
Sbjct: 20  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPI-- 77

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
              + ++ + + V    ++     G ++ L+NN G   +   +  S  G+   ++ N   
Sbjct: 78  ---QCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 134

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
              +   ++ S ++     I+N+  V    GF
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGF 165

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 85.3 bits (212), Expect = 4e-20
 Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 11/153 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TGS+ GIG   AR  A +GA V +  R   A  +          G           
Sbjct: 9   RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA-----FFA 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN-----H 180
            DL + ++  +  + +  + G + VLINNAG     +P  +     Y+  M  N      
Sbjct: 64  ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVM 123

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
                L  L   +   G  S +I+  S+  + G
Sbjct: 124 TTKFALPHLAAAAKASGQTSAVISTGSIAGHTG 156

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 85.0 bits (211), Expect = 5e-20
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 28/178 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVM--AVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
             +VTG + GIG+ I   L       V+    R+     +L +K                
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEK---------YGDRFFY 54

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAP 183
           +  D+     + +   A     G +  L+ NAG+    +   +   + +++   +N  + 
Sbjct: 55  VVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSI 114

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
             L  +  P L + +   ++ V+S                +    ++S   Y  SK A
Sbjct: 115 VSLVGIALPELKKTN-GNVVFVSS---------------DACNMYFSSWGAYGSSKAA 156

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 84.5 bits (210), Expect = 7e-20
 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 17/154 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIG+ IA +L + G  V +A  N   A  +  +  +   G  +     A++
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAV-----AVK 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+   D V    E     LG   V++NNAG+      +  + +  ++   +N     + 
Sbjct: 58  VDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNIN-----VK 112

Query: 187 SILLF-----PSLIR-GSPSRIINVNSVMHYVGF 214
            ++        +  + G   +IIN  S   +VG 
Sbjct: 113 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN 146

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 84.5 bits (210), Expect = 7e-20
 Identities = 45/192 (23%), Positives = 70/192 (36%), Gaps = 44/192 (22%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG  SG+G E+ + L   GA V  +  N  A  +L  +         L      + 
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAE---------LGERSMFVR 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN------- 179
            D+ S         A   RLG L+VL+NNAGI   G+ +    + +   +++N       
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 180 --HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSG 237
                 A+          + +   IIN+ SV  ++                     GYS 
Sbjct: 119 CQQGIAAM----------KETGGSIINMASVSSWLPIEQ---------------YAGYSA 153

Query: 238 SKLAQVKLETKN 249
           SK A V   T+ 
Sbjct: 154 SKAA-VSALTRA 164

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 84.4 bits (210), Expect = 7e-20
 Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 15/149 (10%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           +   +VTG + GIGR IA  L   G  V +A RN + A + +                  
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGA--------------VP 47

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           +  D L  D      +     LG LHVL++ A +       + S + +   + ++     
Sbjct: 48  LPTD-LEKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAF 106

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           LL+    P +      R++ + SV  +  
Sbjct: 107 LLAQAAAPHMAEAGWGRVLFIGSVTTFTA 135

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 84.5 bits (210), Expect = 8e-20
 Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 9/147 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
              VTG+ SGIG EI R  A SGA +++  R   A +       +E            + 
Sbjct: 13  CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA----AQELGAAV----AARIV 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   +++   +      + P+ +L+N+AGI  + +  +     + + M VN       
Sbjct: 65  ADVTDAEAMTAAAAEAE-AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           S     +++      I+N+ S+   + 
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIV 150

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 85.0 bits (211), Expect = 8e-20
 Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 11/153 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ------EEWSGKGLPL 120
           T  +TG++ GIG  IA + A  GA+V +A ++  A  +L               G+GL L
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL 67

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
                + D+   D V     A     G + +L+NNA    +          ++   QVN 
Sbjct: 68  -----KCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNA 122

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
               + +    P L++     I+ +        
Sbjct: 123 RGSFVCAQACLPHLLQAPNPHILTLAPPPSLNP 155

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 84.1 bits (209), Expect = 8e-20
 Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 32/185 (17%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
            +     ++TG++SGIG   AR LA  GA V +A R +    E ++   +E +  G    
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRV----EKLRALGDELTAAG--AK 57

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-- 179
           +  +ELD+     V     +    LG L +L+NNAGI  +G  +      +   +  N  
Sbjct: 58  VHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL 117

Query: 180 ---HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYS 236
              ++  A L     P L+R   + ++ ++S               ++GR    +   Y 
Sbjct: 118 GLMYMTRAAL-----PHLLRSKGT-VVQMSS---------------IAGRVNVRNAAVYQ 156

Query: 237 GSKLA 241
            +K  
Sbjct: 157 ATKFG 161

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 84.9 bits (211), Expect = 9e-20
 Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 27/151 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG+ +GIG  +AR+LA+ G HV+ A  +  AA+        +           A  
Sbjct: 31  VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA----TKIGCGAA-----ACR 81

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN------- 179
           +D+     ++   +A     G +  L+ NAG+  +      + + ++  + +N       
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLC 141

Query: 180 --HLAPALLSILLFPSLIRGSPSRIINVNSV 208
             H AP ++         RG    I+N++S+
Sbjct: 142 TKHAAPRMIE--------RGG-GAIVNLSSL 163

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 85.0 bits (211), Expect = 9e-20
 Identities = 29/144 (20%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTG+  GIGRE+A +L   G  V++    + ++A E++   ++             +
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAA-----CV 84

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           + ++  ++ +VR  E      G L ++ +N+G+ S G  +  + + ++    +N      
Sbjct: 85  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 144

Query: 186 LSILLFPSLIRGSPSRIINVNSVM 209
           ++   +  L  G   R+I + S+ 
Sbjct: 145 VAREAYKHLEIG--GRLILMGSIT 166

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 23/176 (13%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTGS  GIG  +A  L   GA VV+    + K A +++ + +       +     A+
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAI-----AI 73

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           + D+  +  +V+  +      G L + ++N+G+ S G  +  +++ ++    +N      
Sbjct: 74  KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFF 133

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
           ++   +  L  G   RI+  +S                S          YSGSK A
Sbjct: 134 VAREAYRHLTEG--GRIVLTSS--------------NTSKDFSVPKHSLYSGSKGA 173

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 12/162 (7%)

Query: 51  ASHLQNPLPLPPVNDL---TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELI 106
           ++ + +  P      L     + TG+  GIGR IA +L   GA VV+    + KAA E++
Sbjct: 4   SADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV 63

Query: 107 QKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQK 166
            +  ++   +G+     A++ D+     VV   +      G L  +++N+G+    +  +
Sbjct: 64  AEL-KKLGAQGV-----AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELE 117

Query: 167 FSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
            +++ +++   +N      ++        RG   RII  +S+
Sbjct: 118 VTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSI 157

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 84.1 bits (209), Expect = 1e-19
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 7/142 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG+ +GIGR IA   A++GA VV+     + A  +      +  GK +      +E
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAI-RQAGGKAI-----GLE 67

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            ++          +A   + G + VL+NNAG     +P       +E   ++N  +   L
Sbjct: 68  CNVTDEQHREAVIKAALDQFGKITVLVNNAGG-GGPKPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           S L  P + +     I+N++S+
Sbjct: 127 SQLAAPHMQKAGGGAILNISSM 148

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 84.1 bits (209), Expect = 1e-19
 Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 17/148 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTGS+ G+G+  A +LAE+G ++V+   R+ KAA E  ++  E+   K L      +
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEI-EKLGVKVL-----VV 59

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           + ++     +    +  +   G L V +NNA    +    +  +  ++  M +N      
Sbjct: 60  KANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNIN-----A 114

Query: 186 LSILLF-----PSLIRGSPSRIINVNSV 208
            ++L         + +     I++++S+
Sbjct: 115 KALLFCAQEAAKLMEKNGGGHIVSISSL 142

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 25/157 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG  SG+GR +  +    GA V +  ++ +   EL         G  +      + 
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE----VAHGGNAV-----GVV 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQK-----FSKDGYEEHMQVNHL 181
            D+ SL    R +E      G +  LI NAGI+                 +++   VN  
Sbjct: 58  GDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVN-- 115

Query: 182 APALLSILL-----FPSLIRGSPSRIINVNSVMHYVG 213
              +   +       P+L+      ++   S   +  
Sbjct: 116 ---VKGYIHAVKACLPALVSSR-GSVVFTISNAGFYP 148

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 84.1 bits (209), Expect = 1e-19
 Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 34/157 (21%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG +SGIG  +   L   GA VV    + K+   +                 +  +
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV----------------SDHFK 59

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN------- 179
           +D+ + + V    E    + G + +L+NNAGI           + +   + VN       
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLM 119

Query: 180 --HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
             +  P +L+         G  S IIN+ SV  Y   
Sbjct: 120 AKYTIPVMLA--------IGHGS-IINIASVQSYAAT 147

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 8/149 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + +VTG T GIGR IA   A +GA+V +A R+ +  + +  +  E  +G  +      + 
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVI-----GVR 97

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+    S    +       G L V+  NAGIF        + +   E + VN       
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYT 157

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFV 215
                  L      R+I  +S+    G V
Sbjct: 158 VQACLAPLTASGRGRVILTSSI---TGPV 183

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 84.2 bits (209), Expect = 1e-19
 Identities = 33/147 (22%), Positives = 52/147 (35%), Gaps = 17/147 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIG  +   L  +GA V +A R +      +                  + 
Sbjct: 30  VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------------HLP 72

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL           A    LG L +++NNAG+ S G   + +   +   + VN  AP  +
Sbjct: 73  GDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRI 132

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
                P +       I+NV S      
Sbjct: 133 CRAAIPLMAAAGGGAIVNVASCWGLRP 159

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 83.9 bits (208), Expect = 2e-19
 Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 31/143 (21%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +++G  +GIG    + L  +G  +V                       G+ +    + 
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIV-----------------------GIDIRDAEVI 39

Query: 127 LDLLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            DL + +   +  ++        +  L+  AG+    +            + VN+     
Sbjct: 40  ADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKV-------LGNVVSVNYFGATE 92

Query: 186 LSILLFPSLIRGSPSRIINVNSV 208
           L     P+L +G     + ++SV
Sbjct: 93  LMDAFLPALKKGHQPAAVVISSV 115

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 28/173 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++SG+G E+A+     G    +  R+    + +            L  N+    
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNC---------LSNNVGYRA 53

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL S   V +  E  +        ++++AG    G  Q+   +  +  ++ N  +   +
Sbjct: 54  RDLASHQEVEQLFEQLDSI---PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINV 110

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSK 239
              L        P  ++ + S             +             Y   K
Sbjct: 111 LRELVKRYKD-QPVNVVMIMST---AAQQPKAQEST------------YCAVK 147

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 83.9 bits (208), Expect = 2e-19
 Identities = 34/176 (19%), Positives = 53/176 (30%), Gaps = 33/176 (18%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGL------- 118
             +VTG+   +GR IA  L   G  V +   R+   AN L            +       
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70

Query: 119 -----PLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF-------------- 159
                P++       +           A     G   VL+NNA  F              
Sbjct: 71  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 130

Query: 160 SIGEPQKFSKDGYEEHMQVNHLAPALLS------ILLFPSLIRGSPSRIINVNSVM 209
                ++  +    +    N +AP  L       +   P+  RG+   IIN+   M
Sbjct: 131 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 186

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 83.4 bits (207), Expect = 2e-19
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 19/156 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA--VRNLKAANELIQKWQEEWSGKGLPLNIEA 124
             +VTG   GIGR I+ +LA  G  + +A   +  + A E I+  +     K +      
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAV-----F 57

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA 184
           + LD+    +     +    +LG   VL+NNAGI  I    + +++  ++   VN     
Sbjct: 58  VGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVN----- 112

Query: 185 LLSILLF-----PSLI-RGSPSRIINVNSVMHYVGF 214
           + S+              G   +IIN  S+    GF
Sbjct: 113 VFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF 148

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 83.4 bits (207), Expect = 3e-19
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 17/154 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIG  IAR+L   GA VV+  R+++    + ++      G+       +  
Sbjct: 31  VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREI-VAAGGEAE-----SHA 84

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            DL   D++  F+       G   VL+NNAG+   G P        ++  + VN     L
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVN-----L 139

Query: 186 LSILLF-----PSLIRGSPSRIINVNSVMHYVGF 214
            +  L      P++I      IIN++S+      
Sbjct: 140 KAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV 173

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 83.0 bits (206), Expect = 3e-19
 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 22/157 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTGS  GIG+  A  LA  GA VV+A  N +AA  + ++      G  +     ++ 
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI-VADGGTAI-----SVA 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF---SKDGYEEHMQVNHLAP 183
           +D+   +S    ++      G +  L+NNA IF   +         + Y++ M VN    
Sbjct: 65  VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVN---- 120

Query: 184 ALLSILLF-----PSLIRGSPSRIINVNSVMHYVGFV 215
            L   L         + +     I+N +S      ++
Sbjct: 121 -LDGALWCTRAVYKKMTKRGGGAIVNQSST---AAWL 153

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 84.0 bits (208), Expect = 3e-19
 Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 19/177 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++SG GR  A  LA +G  V  ++R++   N    +    ++     +++  +E
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DVDLRTLE 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+ S  SV R  +   G  G + VLI+NAG    G  + F+ + + E   +N L+   +
Sbjct: 66  LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125

Query: 187 SILLFPSL-IRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMG-YSGSKLA 241
           +    P +  +     +I ++S                S        +  Y  +K A
Sbjct: 126 NRAALPHMRRQKH-GLLIWISS---------------SSSAGGTPPYLAPYFAAKAA 166

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 82.5 bits (205), Expect = 4e-19
 Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 25/158 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG+ SGIGR IA++ A + + VV         N+++Q+ +     + L      ++
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVL-----GVK 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN------ 179
            D+     V  F          + VL NNAGI     P  + S + +E  + VN      
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 180 ---HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
               + P +L         +G    I+N  S+    G 
Sbjct: 123 SSRAVIPIMLK--------QGK-GVIVNTASIAGIRGG 151

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 82.6 bits (205), Expect = 4e-19
 Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 25/158 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
            C+VTG+   IG   A +LAE G  + +   N +A  +     +E+   +       +  
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEAR-----SYV 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN------ 179
            D+ S ++V+   ++     G +  L NNAG      P Q +  D +   + +N      
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 122

Query: 180 ---HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
               ++  +++        +    RI+N  S+    G 
Sbjct: 123 VLKAVSRQMIT--------QNY-GRIVNTASMAGVKGP 151

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 82.2 bits (204), Expect = 4e-19
 Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG+  GIG+ IA +LA  GA V+++  N + A             K       A+ 
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA----ASIGKKAR-----AIA 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+    SV           G + +L+NNA I           D + + + VN     ++
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIV 118

Query: 187 SILLFPSLIRGSPS-RIINVNSV 208
           +      +     + R+I++ S 
Sbjct: 119 TRAGTDQMRAAGKAGRVISIASN 141

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 82.2 bits (204), Expect = 5e-19
 Identities = 23/148 (15%), Positives = 53/148 (35%), Gaps = 19/148 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG + GIG+ +   L ++  H V+ +   ++ +                 N++ ++
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------------ENLKFIK 50

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL     +    +    +      +  NAGI   G       +  ++ + +N  +    
Sbjct: 51  ADLTKQQDITNVLDI--IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
              L  +L  G  + I+   S   ++  
Sbjct: 109 IKGLENNLKVG--ASIVFNGSDQCFIAK 134

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 82.6 bits (205), Expect = 5e-19
 Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 26/167 (15%)

Query: 55  QNPLPLPPVNDL---TCIVTG-STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ 110
           + P  +     L     +VT  + +GIG   AR+    GA VV++  + +   E   +  
Sbjct: 9   EAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA 68

Query: 111 EEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKD 170
           +   G+       A+  D+ S ++V         + G L VL+NNAG+         + +
Sbjct: 69  DLGLGRVE-----AVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDE 123

Query: 171 GYEEHMQVN---------HLAPALLSILLFPSLIRGSPSRIINVNSV 208
            ++  + V                                I+N  SV
Sbjct: 124 EWDRVLNVTLTSVMRATRAALRYFRG--------VDHGGVIVNNASV 162

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 82.2 bits (204), Expect = 6e-19
 Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 25/175 (14%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG+T+G G  I R+  + G  V+   R      E +Q+ ++E             +LD
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIA-----QLD 54

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPALLS 187
           + +  ++     +       + +L+NNAG+    EP  K S + +E  +  N+     ++
Sbjct: 55  VRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMT 114

Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQ 242
             + P ++  +   IIN+ S                +G   Y     Y  +K   
Sbjct: 115 RAVLPGMVERNHGHIINIGS---------------TAGSWPYAGGNVYGATKAFV 154

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 82.2 bits (204), Expect = 6e-19
 Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 43/192 (22%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V+G   G+G    R +   GA VV      +    +      E +          + 
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA----AELADAAR-----YVH 59

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN------- 179
           LD+          +      G LHVL+NNAGI +IG  + ++   ++  + VN       
Sbjct: 60  LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119

Query: 180 --HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSG 237
              +   +           G  S IIN++S+    G V                  GY+ 
Sbjct: 120 IRAVVKPMKE--------AGRGS-IINISSIEGLAGTVA---------------CHGYTA 155

Query: 238 SKLAQVKLETKN 249
           +K A V+  TK+
Sbjct: 156 TKFA-VRGLTKS 166

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 82.2 bits (204), Expect = 6e-19
 Identities = 28/153 (18%), Positives = 63/153 (41%), Gaps = 17/153 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG    IG      LAE+GA V++A  +   A + +    E+   +G   ++ ++ 
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV----EDLRMEG--HDVSSVV 68

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
           +D+ + +SV     + + + G + +L+  AGI       +  +   + + + +N     L
Sbjct: 69  MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDIN-----L 123

Query: 186 LSILLF-----PSLIRGSPSRIINVNSVMHYVG 213
             +          ++      I+ + S+   + 
Sbjct: 124 NGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV 156

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 82.2 bits (204), Expect = 6e-19
 Identities = 31/154 (20%), Positives = 67/154 (43%), Gaps = 16/154 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TGS++G+G+ +A + A   A VV+  R+ +     + +  ++  G+ +     A++
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI-----AVK 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+     V+   ++     G L V+INNAG+ +     + S   + + +  N     L 
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN-----LT 118

Query: 187 SILL-----FPSLIR-GSPSRIINVNSVMHYVGF 214
              L         +       +IN++SV   + +
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW 152

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 81.4 bits (202), Expect = 7e-19
 Identities = 38/175 (21%), Positives = 62/175 (35%), Gaps = 25/175 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++ GIG   AR L   G  V +  R+ K    L      E  G         + 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL----AAELEG------ALPLP 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+       R   A     G L  L+NNAG+  +    + + + +   +  N     L 
Sbjct: 57  GDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLG 116

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
                P+L+R     I+NV S               ++G+  +     Y+ SK  
Sbjct: 117 IRHAVPALLRRGGGTIVNVGS---------------LAGKNPFKGGAAYNASKFG 156

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 81.8 bits (203), Expect = 7e-19
 Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 20/153 (13%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             ++TG  +GIGR IA + A  GA + +A +     A   I         + L      +
Sbjct: 9   LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAI----RNLGRRVL-----TV 59

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           + D+     V  F +      G   +L+NNAGI+ +    + + + +++  ++N     +
Sbjct: 60  KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEIN-----V 114

Query: 186 LSILLF-----PSLIRGSPSRIINVNSVMHYVG 213
            S  L      P + R    RIIN+ S  +++ 
Sbjct: 115 DSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK 147

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 81.8 bits (203), Expect = 8e-19
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 14/147 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T IVTG   GIG    R +A +GA+V +  R+   A E+ +K  +E+  K       A +
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTK-----AYQ 70

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HL 181
            D+ + D V +  +  +  LGP+  LI NAG+  +    + + + +     VN     + 
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNT 130

Query: 182 APALLSILLFPSLIRGSPSRIINVNSV 208
             A+  +     L +     I+  +S+
Sbjct: 131 CRAVAKLW----LQKQQKGSIVVTSSM 153

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 82.3 bits (204), Expect = 8e-19
 Identities = 38/175 (21%), Positives = 65/175 (37%), Gaps = 31/175 (17%)

Query: 60  LPPVNDL---TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSG 115
           +P  + +     +VTG+   IGR IA +L ++G  VV+    + +AA  L  +  +E S 
Sbjct: 15  VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN 74

Query: 116 KGLPLNIEAMELDLLSLDSVVR-----FSEAWNGRLGPLHVLINNAGIFSIG-------- 162
             +       + DL + + +        +  +    G   VL+NNA  F           
Sbjct: 75  TAV-----VCQADLTNSNVLPASCEEIINSCFR-AFGRCDVLVNNASAFYPTPLVQGDHE 128

Query: 163 --EPQKFSKDGYEEHMQVNHLAPALLS------ILLFPSLIRGSPSRIINVNSVM 209
                K  +    E +  N +AP LL+                S   I+N+   M
Sbjct: 129 DNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM 183

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 81.8 bits (203), Expect = 8e-19
 Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 26/160 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG++SG G  IA +    G  V     + +   E  +     ++ K L      + 
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVL-----RVR 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP---QKFSKDGYEEHMQVN---- 179
            D+     V     A   + G + VL+NNAGI    E         + +++ M VN    
Sbjct: 59  ADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGI 118

Query: 180 -----HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
                 + P +L         +G+   I+N+ SV   V F
Sbjct: 119 FLGCRAVLPHMLL--------QGA-GVIVNIASVASLVAF 149

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 81.8 bits (203), Expect = 8e-19
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 11/142 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG+ SGIGR      A  GA +V   R  +   E +         + +     A+ 
Sbjct: 8   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV----AALEAEAI-----AVV 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+    +V           G LH + + AG+           + +E+ ++VN     L+
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLV 118

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           +      L  G    ++   SV
Sbjct: 119 ARKAGEVLEEG--GSLVLTGSV 138

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 81.8 bits (203), Expect = 9e-19
 Identities = 40/186 (21%), Positives = 68/186 (36%), Gaps = 45/186 (24%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+ SG G  +A++ A+ GA VV+  R+   A  +      E     L     A+ 
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA----GEIGDAAL-----AVA 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN------ 179
            D+     V    EA   + G + +L+NNAGI    +  +    + ++  + VN      
Sbjct: 62  ADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 180 ---HLAPALLSILLFPSLIRGSPSR---IINVNSVMHYVGFVDTEDMNVVSGRRKYTSLM 233
               L P             G+  +   I+NV S                   R   +L 
Sbjct: 122 MTSKLIPHFKE--------NGAKGQECVILNVAS---------------TGAGRPRPNLA 158

Query: 234 GYSGSK 239
            Y+ +K
Sbjct: 159 WYNATK 164

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 12/149 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG   GIG  I R    SGA VV+  ++      L     E+     +      + 
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL-----EQELPGAV-----FIL 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+   D V         R G L  ++NNAG     +  ++ S  G+ + +++N L    
Sbjct: 61  CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT 120

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           L+ L  P L +   + +IN++S++  +G 
Sbjct: 121 LTKLALPYLRKSQGN-VINISSLVGAIGQ 148

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 81.4 bits (202), Expect = 1e-18
 Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 10/149 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
           T +V G+   IGR  A + A+ GA+VV+      + A   +    E+     L     A+
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVA-EIEKLGRSAL-----AI 63

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPA 184
           + DL +   V     A   + G +H L++ AG     +   +  +  + + + VN  +  
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           L +    P + +G    I+  +S     G
Sbjct: 124 LTAKTALPKMAKG--GAIVTFSSQAGRDG 150

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 82.5 bits (204), Expect = 1e-18
 Identities = 34/176 (19%), Positives = 53/176 (30%), Gaps = 33/176 (18%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGL------- 118
             +VTG+   +GR IA  L   G  V +   R+   AN L            +       
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107

Query: 119 -----PLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIF-------------- 159
                P++       +           A     G   VL+NNA  F              
Sbjct: 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 167

Query: 160 SIGEPQKFSKDGYEEHMQVNHLAPALLS------ILLFPSLIRGSPSRIINVNSVM 209
                ++  +    +    N +AP  L       +   P+  RG+   IIN+   M
Sbjct: 168 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 223

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 40/157 (25%), Positives = 57/157 (36%), Gaps = 25/157 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG++SGIGR  A   A  GA VV+  RN  A  EL  +      G+       A+ 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAA-----ALA 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN------ 179
            D+          E    R G L    NNAG           S +G+ E +  N      
Sbjct: 64  GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123

Query: 180 ---HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
              +  PA+ +         G  S +   +S + +  
Sbjct: 124 AAKYQVPAIAA--------LGGGS-LTFTSSFVGHTA 151

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 81.4 bits (202), Expect = 1e-18
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTG++ GIGR IA++LA  GA V +      + A E + + Q    G        ++
Sbjct: 9   VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAF-----SI 62

Query: 126 ELDLLSLDSVVRFSEA------WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
             +L SL  V     +               +LINNAGI      ++ ++  ++  + VN
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 122

Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
             AP  +       L     SRIIN++S    +  
Sbjct: 123 AKAPFFIIQQALSRLRDN--SRIINISSAATRISL 155

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 81.4 bits (202), Expect = 1e-18
 Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 29/159 (18%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG+  GIG E +R LA +GA VV+A                      +        
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA----ASVGRGAV-----HHV 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP--QKFSKDGYEEHMQVN----- 179
           +DL +  SV    +      G L ++ NNA      +    + + D +++   VN     
Sbjct: 64  VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTM 123

Query: 180 ----HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
               +  P L+S         G  + I+N++S   +  +
Sbjct: 124 LMCKYAIPRLIS--------AGGGA-IVNISSATAHAAY 153

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 14/147 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T  VTG +SGIG  +AR LA  G  V    R+ K  +  +                    
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDG-LRAAGHDVD-----GSS 79

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HL 181
            D+ S D V     A   R GP+ +L+N+AG    GE        + + +  N      +
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRV 139

Query: 182 APALLSILLFPSLIRGSPSRIINVNSV 208
              +L       +      RI+N+ S 
Sbjct: 140 TREVLRA---GGMREAGWGRIVNIAST 163

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 81.1 bits (201), Expect = 2e-18
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 25/152 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+ SGIGR  A  LA  G  V    R      E+  +      G+ +     A+E
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI-VGAGGQAI-----ALE 83

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN------ 179
            D+     +         + G L +++ NAGI  +  P        ++E + VN      
Sbjct: 84  ADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFL 143

Query: 180 ---HLAPALLSILLFPSLIRGSPSRIINVNSV 208
                 P L          RG    I+ V+S+
Sbjct: 144 TLHLTVPYLKQ--------RGG-GAIVVVSSI 166

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 37/166 (22%), Positives = 59/166 (35%), Gaps = 27/166 (16%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           V  L  ++TG  SG+G   A +L   GA  V+            +K         L  N 
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---------LGNNC 60

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI------FSIGEPQKFSKDGYEEHM 176
                D+ S   V        G+ G + V +N AGI      +++ + Q  + + ++  +
Sbjct: 61  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 120

Query: 177 QVN---------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            VN          +A  +          RG    IIN  SV  + G
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRG---VIINTASVAAFEG 163

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 80.3 bits (199), Expect = 3e-18
 Identities = 25/147 (17%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++ GIG  + R   +    VV   R++K + +                +I  + 
Sbjct: 30  VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---------------PDIHTVA 74

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   ++  R       R G +  L+NNAG+F      + +++ Y+ ++ VN      +
Sbjct: 75  GDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHI 134

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           +      +++     I+++ + +    
Sbjct: 135 TQRAAAEMLKQGSGHIVSITTSLVDQP 161

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 80.3 bits (199), Expect = 3e-18
 Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 25/164 (15%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           +     IVTG++SG+G  + R LA+ GA V+       A  E   +         L   +
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---------LGAAV 55

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQV 178
                D+ +               G +H L+N AG       +G     + D +   + V
Sbjct: 56  RFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115

Query: 179 N---------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           N           A  +          RG    I+N  S+  + G
Sbjct: 116 NLIGTFNMIRLAAEVMSQGEPDADGERG---VIVNTASIAAFDG 156

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 80.8 bits (200), Expect = 3e-18
 Identities = 34/180 (18%), Positives = 74/180 (41%), Gaps = 23/180 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESG---AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           T ++TG+++GIG+  A +  E+      +++A R L    E +++ ++    +     + 
Sbjct: 35  TVLITGASAGIGKATALEYLEASNGDMKLILAARRL----EKLEELKKTIDQEFPNAKVH 90

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLA 182
             +LD+   + +  F E        + +L+NNAG     +   + + +  ++    N  A
Sbjct: 91  VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTA 150

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQ 242
              ++  + P     +   I+N+ S               ++GR  Y +   Y  SK A 
Sbjct: 151 LINITQAVLPIFQAKNSGDIVNLGS---------------IAGRDAYPTGSIYCASKFAV 195

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 79.9 bits (198), Expect = 3e-18
 Identities = 24/142 (16%), Positives = 53/142 (37%), Gaps = 21/142 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V  ++ GIGR +A  L++ GA V +  RN +          +    + +  ++    
Sbjct: 21  GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL--------KRSGHRYVVCDLRKDL 72

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
             L               ++  + +L+ NAG    G   + + + ++E +    L    +
Sbjct: 73  DLLFE-------------KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKI 119

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
                P++      RI+ + S 
Sbjct: 120 VRNYLPAMKEKGWGRIVAITSF 141

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 79.9 bits (198), Expect = 3e-18
 Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 38/187 (20%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAH-------VVMAVRNLKAANELIQKWQEEWSGKGLP 119
             ++TG+  GIGR IA + A +  H       +V++ R      ++  +           
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC-RAEGALTD- 61

Query: 120 LNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
                +  D+  +  V R +     R G +  L+NNAG+   G     +++ ++  M  N
Sbjct: 62  ----TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTN 117

Query: 180 HLAPALLSILL-----FPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMG 234
                L          F  + R     I  + S               V+  + +     
Sbjct: 118 -----LKGTFFLTQALFALMERQHSGHIFFITS---------------VAATKAFRHSSI 157

Query: 235 YSGSKLA 241
           Y  SK  
Sbjct: 158 YCMSKFG 164

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 79.9 bits (198), Expect = 4e-18
 Identities = 29/147 (19%), Positives = 45/147 (30%), Gaps = 16/147 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
              VTG+  GIG   A    E+GA V    +                             
Sbjct: 9   NVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY----------------PFATEV 52

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+     V +  +        L  L+N AGI  +G   + SK+ +++   VN      L
Sbjct: 53  MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
                    R     I+ V S   +  
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTP 139

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 80.3 bits (199), Expect = 4e-18
 Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 23/158 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG  SG+GR  A +LA  GA + +   + +          E          +    
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET----APDAEVLTTV 70

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVN------ 179
            D+     V  +  A   R G +    NNAGI     P + F+   +++ + +N      
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130

Query: 180 ---HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
               +   +          +GS   ++N  SV    G 
Sbjct: 131 GLEKVLKIMRE--------QGSGM-VVNTASVGGIRGI 159

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 80.4 bits (199), Expect = 4e-18
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+TSGIG EIAR+L + G  V +  R  +     +    +E    G  +  +   
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL----KELREAG--VEADGRT 77

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
            D+ S+  +     A   R GP+ VL+NNAG 
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 79.9 bits (198), Expect = 5e-18
 Identities = 20/151 (13%), Positives = 50/151 (33%), Gaps = 11/151 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVV---MAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
             ++ G    +G   A+  A    ++V      ++   AN+L  + +++   K       
Sbjct: 13  VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVA----- 66

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
             + DL + + V +  +      G + + IN  G        + S+  ++    +N+   
Sbjct: 67  LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
                     +       II + + +     
Sbjct: 127 YFFIKQAAKHMNPN--GHIITIATSLLAAYT 155

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 80.0 bits (198), Expect = 5e-18
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 13/147 (8%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           VTG++SG GR IA     +G  V+   R  +A ++L+  + +           EA+ LD+
Sbjct: 10  VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPD---------RAEAISLDV 60

Query: 130 LSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
              + +    ++    R G + VL+NNAG   +G  ++ ++    +  +++   PA L+ 
Sbjct: 61  TDGERIDVVAADVLA-RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTR 119

Query: 189 LLFPSL-IRGSPSRIINVNSVMHYVGF 214
            L P +  RGS   ++N++S    + F
Sbjct: 120 ALLPQMRERGSG-SVVNISSFGGQLSF 145

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 79.9 bits (198), Expect = 5e-18
 Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 14/163 (8%)

Query: 55  QNPLPLPPVNDL------TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK 108
           + P     V DL         VTGS+ GIG  +A   A++GA V +   +  A  +    
Sbjct: 18  KAPTLSKNVLDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA--- 74

Query: 109 WQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP--QK 166
            +      G  ++ +A + ++    SV           G + V + NAG+     P    
Sbjct: 75  -EHLQKTYG--VHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDV 131

Query: 167 FSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM 209
            + D + + + V+       S  +     +     +I  +S+ 
Sbjct: 132 DNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSIS 174

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 79.1 bits (196), Expect = 8e-18
 Identities = 38/154 (24%), Positives = 57/154 (37%), Gaps = 25/154 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG   GIGR IA+  A  GA V +     +         +   +  G        +
Sbjct: 8   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-------EVAEAIGGA-----FFQ 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +DL      VRF E     LG + VL+NNA I + G         +   ++VN     L 
Sbjct: 56  VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVN-----LT 110

Query: 187 SILLF-----PSLIRGSPSRIINVNSVMHYVGFV 215
           + +         + +     I+NV SV    G  
Sbjct: 111 APMHLSALAAREMRKVGGGAIVNVASV---QGLF 141

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 78.9 bits (195), Expect = 8e-18
 Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 17/146 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I   +  GIG + +R+L +      + +  ++    L      E       +NI    
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-----AELKAINPKVNITFHT 61

Query: 127 LDL-LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            D+ + +    +  +    +L  + +LIN AGI    +         E  + +N      
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQ--------IERTIAINFTGLVN 113

Query: 186 LSILLFPSLIR---GSPSRIINVNSV 208
            +  +     +   G    I N+ SV
Sbjct: 114 TTTAILDFWDKRKGGPGGIIANICSV 139

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 79.2 bits (196), Expect = 1e-17
 Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 16/157 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             IVTG   GIG  IAR LA SG  + +  + + +    +I +       + +      +
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAEL-SGLGARVI-----FL 84

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQ--KFSKDGYEEHMQVN---- 179
             DL  L S     +A     G +  L+NNAGI SI          + ++  + VN    
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144

Query: 180 -HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV 215
                A+L  +L           IIN+ SV   +   
Sbjct: 145 VFFTQAVLKAMLASDARAS--RSIINITSVSAVMTSP 179

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 26/156 (16%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           P++    +VTG+  GIG  IA   A  GA VV    ++  A E +++  ++  G  L L+
Sbjct: 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVV--AIDVDGAAEDLKRVADKVGGTALTLD 267

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGY-----EEH- 175
           + A +    ++D +       +G  G + +L+NNAGI         ++D       E+  
Sbjct: 268 VTADD----AVDKITAHVTEHHG--GKVDILVNNAGI---------TRDKLLANMDEKRW 312

Query: 176 ---MQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
              + VN LAP  L+  L  +   G   R+I ++S+
Sbjct: 313 DAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSM 348

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 13/146 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IVT      G   A +L+E+G  V     + K  +EL                    +L 
Sbjct: 5   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA------------FAETYPQLK 52

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPALLS 187
            +S        EA     G + VL++N       +P  K++ + Y   ++   + P  L 
Sbjct: 53  PMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALV 112

Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVG 213
             +   + +     II + S   +  
Sbjct: 113 NAVASQMKKRKSGHIIFITSATPFGP 138

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 37/180 (20%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++SGIG  IAR+ +E G  +++  R +    E ++             N    +
Sbjct: 18  LVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLP--------NTLCAQ 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HL 181
           +D+    +            GP   ++NNAG+  +G+      + ++    VN     + 
Sbjct: 66  VDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNG 125

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLA 241
             A+L       +   +   IIN++S               ++G++ +     Y G+K A
Sbjct: 126 MQAVL-----APMKARNCGTIINISS---------------IAGKKTFPDHAAYCGTKFA 165

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+T GIG  IAR     GA V +         E+            L  ++    
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---------LGKDVFVFS 79

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
            +L    S+ + +E     +  + +L+NNAGI
Sbjct: 80  ANLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 77.9 bits (193), Expect = 2e-17
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 9/92 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIG+ IA  LAE GA V+    +   A  +     +     G     + M 
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS----DYLGDNG-----KGMA 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           L++ + +S+    +A     G + +L+NNAGI
Sbjct: 62  LNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 24/161 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE-WSGKGLPLNIEAM 125
             +VTG+ SGIGR ++ +LA  GA V     +  AA E ++              N  A 
Sbjct: 9   LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF 68

Query: 126 ELDLLSLDSVVRFSEAWNGRLG-PLHVLINNAGIFSIGEPQKFSKDGY-----EEH---- 175
           + D+    +     E        P  V+++ AGI         ++D +     E+     
Sbjct: 69  QADVSEARAARCLLEQVQACFSRPPSVVVSCAGI---------TQDEFLLHMSEDDWDKV 119

Query: 176 MQVNHLAPALLSILLFPSLIRGSPS-RIINVNSVMHYVGFV 215
           + VN     L++     +L+       IIN++S+   VG V
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSI---VGKV 157

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 77.5 bits (192), Expect = 2e-17
 Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 5/92 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTGST GIGR IA +LA +G+ V++   + + A  + ++   ++  K        +E
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKA-----HGVE 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           ++LLS +S+ +  E     +  + +L+NNAGI
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 76.5 bits (189), Expect = 3e-17
 Identities = 19/151 (12%), Positives = 50/151 (33%), Gaps = 30/151 (19%)

Query: 64  NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           N +  ++ G++  +G  +  +L +  A V+ A R                       +  
Sbjct: 2   NAMKILLIGASGTLGSAVKERLEK-KAEVITAGR-----------------------HSG 37

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            + +D+ ++DS+ +  E    ++G +  +++  G  +     + + +     +       
Sbjct: 38  DVTVDITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQ 93

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
             L +L   SL             +M     
Sbjct: 94  INLVLLGIDSLNDK--GSFTLTTGIMMEDPI 122

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 77.6 bits (192), Expect = 3e-17
 Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 35/157 (22%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG++ GIGR IA +  + G+ V+    +     +                  + +E
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK-----------------YDHIE 52

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN------- 179
            D+ + D V    +      G + VL+NNAGI S G+ +  S   +   + VN       
Sbjct: 53  CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYA 112

Query: 180 --HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
                P ++            PS I+N++SV   +  
Sbjct: 113 SKFAIPYMIR--------SRDPS-IVNISSVQASIIT 140

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 77.1 bits (191), Expect = 3e-17
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIG E+A  LA  GA VV    +  +A +     +     KG       + 
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF----ENSMKEKG--FKARGLV 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
           L++  ++S+  F          + +L+NNAGI
Sbjct: 61  LNISDIESIQNFFAEIKAENLAIDILVNNAGI 92

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 77.6 bits (192), Expect = 3e-17
 Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 27/156 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG++ GIGR IA +LA  GA V+        A  +   + ++   +G         
Sbjct: 30  VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAF-KQAGLEG-----RGAV 83

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG---------YEEHMQ 177
           L++    +V    E+     G L+VL+NNAGI         ++D          ++  + 
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVNNAGI---------TQDQLAMRMKDDEWDAVID 134

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            N  A   LS  +   +++    RI+N+ SV   VG
Sbjct: 135 TNLKAVFRLSRAVLRPMMKARGGRIVNITSV---VG 167

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 77.7 bits (192), Expect = 3e-17
 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 18/152 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIGR  A  L   GA V +   NL+A  +      E++  +        ++
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ----KTLFIQ 64

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+     +           G L +L+NNAG+         ++  +E+ +Q+N ++    
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGV--------NNEKNWEKTLQINLVSVISG 116

Query: 187 SILLFPSLIR---GSPSRIINVNSVMHYVGFV 215
           + L    + +   G    IIN++S+    G +
Sbjct: 117 TYLGLDYMSKQNGGEGGIIINMSSL---AGLM 145

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
              VTG   GIG  I ++L + G  VV         +    KW E+    G   +  A E
Sbjct: 15  IAYVTGGMGGIGTSICQRLHKDGFRVVA---GCGPNSPRRVKWLEDQKALG--FDFYASE 69

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            ++   DS  +  +     +G + VL+NNAGI      +K +++ ++  +  N  +   +
Sbjct: 70  GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNV 129

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           +  +   ++     RIIN++SV
Sbjct: 130 TKQVIDGMVERGWGRIINISSV 151

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
              VTG   G+G  I+R+L ++G  V +               W       G   + +A 
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHV----STWLMHERDAG--RDFKAY 80

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
            +D+   +S  R +E      G + VLINNAGI
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAGI 113

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 77.2 bits (191), Expect = 6e-17
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 27/156 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIGREIA+ LA+S +HV+   R  K+ + ++ +  + +  +          
Sbjct: 46  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYES-----SGYA 99

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG---------YEEHMQ 177
            D+   + +             + +L+NNAGI         ++D          +E+ ++
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGI---------TRDNLFLRMKNDEWEDVLR 150

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            N  +   ++  +   +I     RIIN++S+   VG
Sbjct: 151 TNLNSLFYITQPISKRMINNRYGRIINISSI---VG 183

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 75.6 bits (187), Expect = 1e-16
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 11/142 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+  GIGR      A+ GA +V          E  +            +    + 
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----------VGAHPVV 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+    SV R        LG L  +++ AGI       K   + +E  ++VN     L+
Sbjct: 56  MDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 187 SILLFPSLIRGSPSRIINVNSV 208
           +     ++   +P  I+   S 
Sbjct: 116 AKAASEAMREKNPGSIVLTASR 137

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 75.6 bits (187), Expect = 1e-16
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T IVTGS+ G+G+ IA +L   GA++V+       + +   +  +              +
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINV-----VVAK 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
            D+ + + V    +      G + +L+NNAGI
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 12/153 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAES---GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
             ++TG +SGIG  +A +LA        V   +R+LK    L   W+   +    P ++E
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL---WEAARALACPPGSLE 60

Query: 124 AMELDLLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
            ++LD+    SV         GR   + VL+ NAG+  +G  +   +D     + VN + 
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117

Query: 183 PALLSILLFPSL-IRGSPSRIINVNSVMHYVGF 214
              +     P +  RGS  R++   SV   +G 
Sbjct: 118 TVRMLQAFLPDMKRRGS-GRVLVTGSVGGLMGL 149

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 75.3 bits (186), Expect = 2e-16
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 21/152 (13%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +VTG + GIG  + R  A  G  V +    N +AA+ ++    E   G+ +     A+
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAV-----AI 81

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPA 184
             D+ +   +     A + + G L  L+NNAGI    +   + S +  E  ++VN     
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVN----- 136

Query: 185 LLSILL--------FPSLIRGSPSRIINVNSV 208
           +   +L           L  G    I+NV+S+
Sbjct: 137 VTGSILCAAEAVRRMSRLYSGQGGAIVNVSSM 168

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 74.8 bits (185), Expect = 2e-16
 Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 26/156 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIG+ IA  L ++G  V++       A E + K  E + G+          
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA-----ITFG 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG---------YEEHMQ 177
            D+     V    +      G + V++NNAGI         ++D          ++E + 
Sbjct: 58  GDVSKEADVEAMMKTAIDAWGTIDVVVNNAGI---------TRDTLLIRMKKSQWDEVID 108

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           +N     L +      +++    RIIN+ SV   VG
Sbjct: 109 LNLTGVFLCTQAATKIMMKKRKGRIINIASV---VG 141

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 22/180 (12%), Positives = 52/180 (28%), Gaps = 32/180 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IV G    +G  I     ++G  V+    +             + +   + +      
Sbjct: 5   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLS-----------ANDQADSNILV---DGN 50

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            +    +  +    A + +   +  +   AG ++ G    K      +  ++ +  + A+
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
            + L    L  G    +    +                       S++GY  +K A   L
Sbjct: 111 AAKLATTHLKPG--GLLQLTGAAAAMGPT---------------PSMIGYGMAKAAVHHL 153

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 74.4 bits (184), Expect = 3e-16
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 26/156 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIGR IA  LA+ GA+VV+     +     +    ++           A+ 
Sbjct: 6   VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDA-----IAVR 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG---------YEEHMQ 177
            D+ + + V    +      G + +L+NNAG+         +KD          ++  + 
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGV---------TKDNLLMRMKEEEWDTVIN 111

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            N     L +  +   ++R    RI+N+ SV   VG
Sbjct: 112 TNLKGVFLCTKAVSRFMMRQRHGRIVNIASV---VG 144

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 74.9 bits (185), Expect = 3e-16
 Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++T  T G+G+++  +L   G  V +   +   A E +++  ++   +        ++
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQ-----FVQ 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAG 157
            D+   + + +  E      G +  LINNAG
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 74.5 bits (184), Expect = 4e-16
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 23/151 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIGR IA +LA +GA V +   +   A + +        G+       A++
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEA-----FAVK 84

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG---------YEEHMQ 177
            D+     V     A   R G L VL+NNAGI         ++D          ++  + 
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGI---------TRDTLLLRMKRDDWQSVLD 135

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
           +N     L S      +++    RIIN+ SV
Sbjct: 136 LNLGGVFLCSRAAAKIMLKQRSGRIINIASV 166

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 74.1 bits (183), Expect = 4e-16
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TG++SGIG  IAR L + G+ V+++  N +    L            L  N     
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---------LKDNYTIEV 66

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI 158
            +L + +               L +L+ NAGI
Sbjct: 67  CNLANKEECSNLISKT----SNLDILVCNAGI 94

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 73.9 bits (182), Expect = 5e-16
 Identities = 22/181 (12%), Positives = 47/181 (25%), Gaps = 34/181 (18%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAM 125
             +V G    +G    +        V    V   + A+  +               ++  
Sbjct: 9   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVI--------------VKMT 54

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPA 184
           +      D V        G    +  ++  AG ++ G    K      +   + +     
Sbjct: 55  DSFTEQADQVTAEVGKLLG-DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTST 113

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVK 244
           + S L    L  G    +    +                +       ++GY  +K A  +
Sbjct: 114 ISSHLATKHLKEG--GLLTLAGA---------------KAALDGTPGMIGYGMAKGAVHQ 156

Query: 245 L 245
           L
Sbjct: 157 L 157

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 74.1 bits (183), Expect = 5e-16
 Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 24/168 (14%)

Query: 55  QNPLPLPPVNDL------TCIVTGS--TSGIGREIARQLAESGAHVVMA-VRNLKAANEL 105
           Q       + D         +VTG+    G+G E AR  AE GA V +      + A E 
Sbjct: 4   QQATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEEN 63

Query: 106 IQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQ 165
           +++ ++ +  K       A +  + S +S  +  +      G +   I NAG  +     
Sbjct: 64  VKELEKTYGIKAK-----AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGIL 118

Query: 166 KFSKDGYEEHMQVNHLAPALLSILLF-----PSLIRGSPSRIINVNSV 208
             S + +   +QV+     L                     ++   S+
Sbjct: 119 DGSVEAWNHVVQVD-----LNGTFHCAKAVGHHFKERGTGSLVITASM 161

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 74.2 bits (183), Expect = 6e-16
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 29/181 (16%)

Query: 50  LASHLQNPLPLPPVNDL---TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELI 106
           L +  Q P  +  +      + IV+G   G+G    R+L   G  VV+A    +    L 
Sbjct: 12  LEAQTQGPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA 71

Query: 107 QKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG---- 162
            +         L    E +  ++ S DSV+   EA N      + ++ + G         
Sbjct: 72  DE---------LGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQ 122

Query: 163 -EPQKFSKDGYEEHMQVN---------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYV 212
            +       G+ + + +           +A ++ +     +  RG+   ++   S+  Y 
Sbjct: 123 RDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGA---LVLTASIAGYE 179

Query: 213 G 213
           G
Sbjct: 180 G 180

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 73.7 bits (182), Expect = 7e-16
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 26/156 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + +VTG++ GIGR IA QLAE G +V +     K   E + +  +            A++
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDS-----FAIQ 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG---------YEEHMQ 177
            ++   D V    +    + G L VL+NNAGI         ++D          +++ + 
Sbjct: 61  ANVADADEVKAMIKEVVSQFGSLDVLVNNAGI---------TRDNLLMRMKEQEWDDVID 111

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            N            P ++R     IIN++SV   VG
Sbjct: 112 TNLKGVFNCIQKATPQMLRQRSGAIINLSSV---VG 144

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 72.9 bits (180), Expect = 1e-15
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 25/156 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG++ GIGR IA +LAE G  + +     +   E + +             +  + 
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPL----VAVLG 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG---------YEEHMQ 177
            +LL  ++           LG L  L+NNAGI         ++D          +E  ++
Sbjct: 59  ANLLEAEAATALVHQAAEVLGGLDTLVNNAGI---------TRDTLLVRMKDEDWEAVLE 109

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
            N  A    +      +++    RI+N+ SV   VG
Sbjct: 110 ANLSAVFRTTREAVKLMMKARFGRIVNITSV---VG 142

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 73.0 bits (180), Expect = 1e-15
 Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 6/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
              +TGS SGIG  +   LA +G  V+   R        +       +     L+     
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGV 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP--QKFSKDGYEEHMQVNHLAPA 184
           LD L   + V  + A       L V +N  G+ ++ +   +  S+      + V  +A  
Sbjct: 63  LDGLVCCAGVGVTAAN----SGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVG 213
                  P +             +    G
Sbjct: 119 QPGAAELPMVEAMLAGDEARAIELAEQQG 147

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 25/163 (15%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           + D   +VTG  SG+G    ++L ++GA VV+     +     +                
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGD------------RA 54

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQV 178
                D+    +V    +     +G L +++N AG  +    +     FS   + + + +
Sbjct: 55  RFAAADVTDEAAVASALDLAE-TMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113

Query: 179 N--------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           N         LA   ++              IIN  SV  + G
Sbjct: 114 NLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG 156

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 71.4 bits (176), Expect = 6e-15
 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 27/158 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG   GIG   A+     GA VV+A        ++                I  + 
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC----NNIGSPD---VISFVH 70

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP--QKFSKDGYEEHMQVN----- 179
            D+   + V    +    + G L ++  N G+ S       +   + ++  M +N     
Sbjct: 71  CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 130

Query: 180 ----HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
               H A  ++             S I+   S+  +  
Sbjct: 131 LVAKHAARVMIP--------AKKGS-IVFTASISSFTA 159

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 35/157 (22%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           PP    + +VTG   GIG  IA++LA  G  V +  R   A   L               
Sbjct: 11  PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------- 56

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG--------- 171
               +E+D+   D+V R   A     GP+ VL++NAG+         S D          
Sbjct: 57  ---GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL---------SADAFLMRMTEEK 104

Query: 172 YEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
           +E+ +  N      ++     S+ R    R+I + SV
Sbjct: 105 FEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSV 141

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 69.5 bits (171), Expect = 3e-14
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 35/151 (23%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + +VTG   GIG  IAR  A++G  V +  R+ +     +                 A++
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL-----------------AVK 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDG---------YEEHMQ 177
            D+   + V +  +      GP+ VLI NAG+         +KD          +   ++
Sbjct: 66  CDITDTEQVEQAYKEIEETHGPVEVLIANAGV---------TKDQLLMRMSEEDFTSVVE 116

Query: 178 VNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
            N      +      +++R    R++ ++SV
Sbjct: 117 TNLTGTFRVVKRANRAMLRAKKGRVVLISSV 147

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 69.5 bits (171), Expect = 3e-14
 Identities = 38/191 (19%), Positives = 70/191 (36%), Gaps = 43/191 (22%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL-------- 120
            VTG+  G GR  A +LA+ GA ++           ++       + + L          
Sbjct: 15  FVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH 74

Query: 121 --NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQ 177
              I   E+D+   D++    ++   +LG L +++ NAGI + G+   K S++ + E + 
Sbjct: 75  NRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134

Query: 178 VN---------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRK 228
           +N            P +++         G    II  +S               V G + 
Sbjct: 135 INLAGVWKTVKAGVPHMIA--------GGRGGSIILTSS---------------VGGLKA 171

Query: 229 YTSLMGYSGSK 239
           Y     Y  +K
Sbjct: 172 YPHTGHYVAAK 182

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 69.5 bits (171), Expect = 4e-14
 Identities = 41/178 (23%), Positives = 67/178 (37%), Gaps = 26/178 (14%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMA--VRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           +VTG  SGIGR  A   A  GA V +       + A + ++   EE   K +      + 
Sbjct: 53  LVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQ-VKALIEECGRKAV-----LLP 106

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            DL                LG L +L   AG   +I E +  + + +++   VN  A   
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           ++    P L +G  + II  +S+  Y                    L+ Y+ +K A +
Sbjct: 167 ITQEAIPLLPKG--ASIITTSSIQAYQPSPH---------------LLDYAATKAAIL 207

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 67.3 bits (165), Expect = 1e-13
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 37/163 (22%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           + + +VTG  SG+GR  A  L   G  VV+     +  + +                   
Sbjct: 2   ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI------------------Y 43

Query: 125 MELDLLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQVN 179
           +E D+   + V R  + A      PL  +++ AG+      +G+      + +   ++VN
Sbjct: 44  VEGDVTREEDVRRAVARA--QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVN 101

Query: 180 ---------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG 213
                      A A+          RG    I+N  SV  + G
Sbjct: 102 LLGTFNVLRLAAWAMRENPPDAEGQRG---VIVNTASVAAFEG 141

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 39/187 (20%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE----- 123
            +TG+  G GR  A ++A  GA ++      K  + +                +E     
Sbjct: 15  FITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR 74

Query: 124 --AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-- 179
             A  +D    D + +  +     LG L +++ NAG+ +       + + + + M +N  
Sbjct: 75  IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVT 134

Query: 180 -------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL 232
                    AP ++          G    II ++S                +G +    +
Sbjct: 135 GTWNTVMAGAPRIIE--------GGRGGSIILISS---------------AAGMKMQPFM 171

Query: 233 MGYSGSK 239
           + Y+ SK
Sbjct: 172 IHYTASK 178

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 39/182 (21%), Positives = 60/182 (32%), Gaps = 24/182 (13%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL------NI 122
           +VTG   G GR  A +LAE GA +++                     +            
Sbjct: 14  LVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKA 73

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN--- 179
              E+D+    +V R         G L V++ NAGI  +G         + +   V+   
Sbjct: 74  YTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGA--HLPVQAFADAFDVDFVG 131

Query: 180 --HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSG 237
             +   A L     P L  G  + II   SV   +           +G  +     GYS 
Sbjct: 132 VINTVHAAL-----PYLTSG--ASIITTGSVAGLIAAAQPPG----AGGPQGPGGAGYSY 180

Query: 238 SK 239
           +K
Sbjct: 181 AK 182

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 66.4 bits (163), Expect = 4e-13
 Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 24/158 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE--- 123
              +TG+  G GR  A +LA  GA ++        +  +                +E   
Sbjct: 17  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG 76

Query: 124 ----AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
                  LD+    ++         + G L V++ NAG+ S G   + + + ++  + VN
Sbjct: 77  RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVN 136

Query: 180 ---------HLAPALLSILLFPSLIRGSPSRIINVNSV 208
                       PA++          G+   I+ V+S 
Sbjct: 137 LTGTWRTLRATVPAMIE--------AGNGGSIVVVSSS 166

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 65.7 bits (161), Expect = 6e-13
 Identities = 39/188 (20%), Positives = 67/188 (35%), Gaps = 38/188 (20%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL------ 120
              +TG+  G GR  A +LA  GA ++      + A+        E     + L      
Sbjct: 15  VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS 74

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN- 179
            I A + D+   +S+    +A    LG L +++ NAGI     P     DG+ + + VN 
Sbjct: 75  RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI----APMSAGDDGWHDVIDVNL 130

Query: 180 --------HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTS 231
                      P L+         +G+   I+ ++S     G       +          
Sbjct: 131 TGVYHTIKVAIPTLVK--------QGTGGSIVLISSS---AGLAGVGSADP--------G 171

Query: 232 LMGYSGSK 239
            +GY  +K
Sbjct: 172 SVGYVAAK 179

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 64.9 bits (159), Expect = 1e-12
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 20/155 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVV--------MAVRNLKAANELIQKWQEEWSGKGL 118
           T ++TG   G+GR  A  LAE+GA +           V    A  + + +        G 
Sbjct: 12  TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR 71

Query: 119 PLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQV 178
                + ++D+    ++  F       LG + + I NAGI +I    +     ++E +  
Sbjct: 72  --RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGT 129

Query: 179 N-----HLAPALLSILLFPSLIRGSPSRIINVNSV 208
           N     +   A+      P +I+ +  RI+ V+S+
Sbjct: 130 NLTGTFNTIAAVA-----PGMIKRNYGRIVTVSSM 159

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 28/160 (17%), Positives = 59/160 (36%), Gaps = 28/160 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMA--------VRNLKAANELIQKWQEEWSGKGL 118
              +TG+  G GR  A  LA  GA ++          V+   +  + + +   +    G 
Sbjct: 30  VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR 89

Query: 119 PLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQ 177
              I A ++D+   D++    +    +LG L +++ NA + S G    +     + + + 
Sbjct: 90  --RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147

Query: 178 VN---------HLAPALLSILLFPSLIRGSPSRIINVNSV 208
           VN            P +++              I+  +S+
Sbjct: 148 VNLNGAWITARVAIPHIMA--------GKRGGSIVFTSSI 179

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 29/160 (18%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVM------------AVRNLKAANELIQKWQEEWS 114
              +TG+  G GR  A +LA+ GA +V             A  + +   E ++   EE  
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV-EEQG 106

Query: 115 GKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEE 174
            +     I A + D+  L S+    +      G + +L++N GI + GE    +   + +
Sbjct: 107 RR-----IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSD 161

Query: 175 HMQVN-----HLAPALLSILLFPSLIRGSPS-RIINVNSV 208
            +Q N     H   A+L     PS+I       +I V+S 
Sbjct: 162 ILQTNLIGAWHACRAVL-----PSMIERGQGGSVIFVSST 196

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 62.6 bits (153), Expect = 8e-12
 Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 10/147 (6%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           ++TG  SGIGR ++   A+ GA++ +A +     ANE  +++ E+   K +      +  
Sbjct: 51  LITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANET-KQYVEKEGVKCV-----LLPG 104

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           DL          +    +LG L++L+NN    +     +  + +  E+  ++N  +   +
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVG 213
           +      L +G    IIN  S++ Y G
Sbjct: 165 TKAALSHLKQG--DVIINTASIVAYEG 189

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 60.7 bits (147), Expect = 4e-11
 Identities = 20/127 (15%), Positives = 34/127 (26%), Gaps = 16/127 (12%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           V     +V   T  +G   A  LA  GA VV+  R L  A        + +         
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA--- 173

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINN--AGIFSIGEPQKFSKDGYEEHMQVNH 180
                +     S           +   H +      G+  + +    ++   E     N 
Sbjct: 174 ----AETADDASRAEA-------VKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNA 222

Query: 181 LAPALLS 187
             P  + 
Sbjct: 223 QPPLGIG 229

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 28/125 (22%)

Query: 50  LASHLQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVV----------MAVRNL 99
           L +  Q P  +  V+    IVTG+  GIGR  A   A  GA VV                
Sbjct: 12  LEAQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGG 71

Query: 100 KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN------GRLGPLHVLI 153
            AA  ++    +E +  G     EA+        +V  + +A           G L VL+
Sbjct: 72  SAAQSVV----DEITAAGG----EAV----ADGSNVADWDQAAGLIQTAVETFGGLDVLV 119

Query: 154 NNAGI 158
           NNAGI
Sbjct: 120 NNAGI 124

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 51.2 bits (123), Expect = 7e-08
 Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 26/155 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVV---------MAVRNLKAANELIQKWQEEWSGKG 117
             +VTG+  G+GR  A   AE GA VV            +   AA++++++         
Sbjct: 11  VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE--------- 61

Query: 118 LPLNIEAM----ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYE 173
               I         +  S+++  +  +      G + V++NNAGI       + S + ++
Sbjct: 62  ----IRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD 117

Query: 174 EHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
              +V+      ++   +  + + +  RII   S 
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA 152

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 34/159 (21%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVV---------MAVRNLKAANELIQKWQEEWSGKG 117
             I+TG+  G+G+  + + A+ GA VV             N KAA+ ++ +         
Sbjct: 10  VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDE--------- 60

Query: 118 LPLNIEAM-------ELDLLSLDSVVRFS-EAWNGRLGPLHVLINNAGIFSIGEPQKFSK 169
               I            ++L  D +V  + + +    G +HV+INNAGI      +K ++
Sbjct: 61  ----IVKNGGVAVADYNNVLDGDKIVETAVKNF----GTVHVIINNAGILRDASMKKMTE 112

Query: 170 DGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
             Y+  + V+      ++   +P   +    RI+N +S 
Sbjct: 113 KDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSP 151

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 18/158 (11%)

Query: 55  QNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWS 114
            +  P   + D   ++TG+ +G+G+E A+  A+ GA VV  V + K A + +    +E  
Sbjct: 312 ASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVV--VNDFKDATKTV----DEIK 365

Query: 115 GKGLPLNIEAMELDLLSLDSVVRFSEAW----NGRLGPLHVLINNAGIFSIGEPQKFSKD 170
             G     EA          V + SEA       + G + +L+NNAGI       K SK 
Sbjct: 366 AAG----GEAW----PDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQ 417

Query: 171 GYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV 208
            ++   QV+ +    LS L +P  +     RIIN+ S 
Sbjct: 418 EWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITST 455

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 25/127 (19%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVM-----AVRNLKAANELIQKWQEEWSGKGLPLN 121
             +VTG+ +G+GRE A   AE GA VV+           A+        +E    G    
Sbjct: 21  VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG---- 76

Query: 122 IEAMELDLLSLDSVVRFS-------EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEE 174
            EA+       +SV+  +       +A+ GR   + +L+NNAGI       K S+  +  
Sbjct: 77  GEAV----ADYNSVIDGAKVIETAIKAF-GR---VDILVNNAGILRDRSLVKTSEQDWNL 128

Query: 175 HMQVNHL 181
              V HL
Sbjct: 129 VNDV-HL 134

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 45.6 bits (108), Expect = 4e-06
 Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 13/69 (18%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           + G+   I R +  QLA+          R     ++              P N + +  D
Sbjct: 28  ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------------YPTNSQIIMGD 75

Query: 129 LLSLDSVVR 137
           +L+  ++ +
Sbjct: 76  VLNHAALKQ 84

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 12/68 (17%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           + G+T   G     Q  ++G  V + VR+                    P     +  D+
Sbjct: 8   IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------------GPRPAHVVVGDV 55

Query: 130 LSLDSVVR 137
           L    V +
Sbjct: 56  LQAADVDK 63

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL 105
           V G+   + R +  +L   G   V  VRN +   EL
Sbjct: 26  VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL 61

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 4e-05
 Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 65/246 (26%)

Query: 10  TSSPSAAELISKSKRKEALGWMEWLRGWLYVIYEMLFQRILASHLQNPLPLPPVN----- 64
           T++P    +I++S R     W      W +V  + L   I+ S L     L P       
Sbjct: 324 TTNPRRLSIIAESIRDGLATW----DNWKHVNCDKL-TTIIESSLNV---LEPAEYRKMF 375

Query: 65  -DLTCIVTGSTSGIGRE---IARQL-----AESGAHVVMAVRNLKAANELIQKWQEEWSG 115
             L          +      I   L      +     VM V N      L++K  +E   
Sbjct: 376 DRL---------SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE--- 423

Query: 116 KGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLH-VLINNAGIFSIGEPQKFSK---DG 171
                    + +  + L+  V+           LH  ++++  I    +         D 
Sbjct: 424 -------STISIPSIYLELKVKLEN-----EYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471

Query: 172 YEEHMQVNHLAPALLS--ILLFPSL------IRGSPSRIINVNSVMHYVGFVDTEDMNVV 223
           Y      +HL        + LF  +      +     +I + ++  +  G +    +N +
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE---QKIRHDSTAWNASGSI----LNTL 524

Query: 224 SGRRKY 229
              + Y
Sbjct: 525 QQLKFY 530

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 6/36 (16%), Positives = 17/36 (47%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL 105
           + GST  +G+ + + L+ +   +    R ++   + 
Sbjct: 5   IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY 40

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 57  PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVR 97
                P    + +VTG T GIG  +AR+LAE GA H+V+  R
Sbjct: 231 GSGKRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSR 272

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 13/69 (18%)

Query: 70  VTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +TG+T  +G  I  Q   +      + VRN++   +                 +   +LD
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------------WRGKVSVRQLD 52

Query: 129 LLSLDSVVR 137
             + +S+V 
Sbjct: 53  YFNQESMVE 61

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 13/71 (18%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++ G++  +G  +  +    G  V   VR+ +               K    +++  +
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-------------KIENEHLKVKK 52

Query: 127 LDLLSLDSVVR 137
            D+ SLD V  
Sbjct: 53  ADVSSLDEVCE 63

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 57  PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVR 97
                P    T +VTG T G+G +IAR LA  GA H+++  R
Sbjct: 220 DDEWKP--TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSR 259

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 25/110 (22%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           V G+T  +G   AR +  +G  +V+  R       L              L  E    ++
Sbjct: 18  VLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY------------LEPECRVAEM 65

Query: 130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
           L    +     A  G       +I +AG +            ++E +   
Sbjct: 66  LDHAGL---ERALRGL----DGVIFSAGYYP------SRPRRWQEEVASA 102

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL 129
           + G T  IGR I     ++G      VR    A     K +   + +   L +  +E D+
Sbjct: 7   ILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDI 64

Query: 130 LSLDSVVR 137
              +++V+
Sbjct: 65  NDHETLVK 72

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAE--SGAHVVMAVRNLKAANELIQK 108
           +  VTG+T  +G  + + L +    + ++  VRN++ A+ L  +
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQ 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	249
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.98
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.98
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.98
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.98
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.98
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.98
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.98
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.98
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.98
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.98
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.98
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.98
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.98
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.98
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.98
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.98
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.98
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.98
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.97
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.97
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.97
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.97
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.97
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.97
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.97
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.97
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.97
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.97
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.97
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.97
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.97
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.97
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.97
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.97
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.97
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.97
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.97
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.97
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.97
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.97
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.97
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.97
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.97
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.97
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.97
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.97
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.97
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.97
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.97
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.97
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.97
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.96
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.96
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.96
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.96
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.96
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.96
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.96
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.96
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.96
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.95
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.95
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.95
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.95
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.95
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.94
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.94
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.94
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.93
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.91
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.89
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.89
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.89
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.86
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.85
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.84
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.83
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.83
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.83
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.82
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.82
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.82
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.82
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.82
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.81
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.81
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.81
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.8
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.8
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.8
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.8
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.8
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.79
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.79
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.79
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.79
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.78
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.78
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.78
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.78
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.77
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.77
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.77
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.77
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.76
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.76
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.75
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.75
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.75
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.75
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.74
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.74
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.74
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.74
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.74
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.74
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.74
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.74
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.73
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.73
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.73
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.72
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.72
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.71
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.71
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.71
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.71
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.7
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.7
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.69
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.69
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.69
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.69
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.68
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.68
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.68
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.68
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.64
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.64
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.63
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.63
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.63
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.62
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.6
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.6
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.58
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.57
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.57
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.55
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.52
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.5
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.48
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.48
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.47
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.47
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.44
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.43
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.4
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.4
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.39
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.34
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.32
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.19
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.07
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.05
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.92
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.9
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.85
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.82
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.8
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.79
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.73
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.72
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.71
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.7
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.68
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.64
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.58
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.55
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.5
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.48
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.48
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.47
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.44
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.43
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.43
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.41
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.39
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.38
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.37
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.36
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.3
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.29
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.29
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.29
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.28
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.28
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.21
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.2
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.16
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.15
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.1
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.09
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.07
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.03
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.01
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.98
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.96
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.95
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.93
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.93
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.93
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.88
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.87
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.86
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.85
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.85
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.85
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.84
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.82
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.8
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.75
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.74
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.73
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.73
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.72
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.69
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.67
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.67
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.66
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.63
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.6
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.54
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.52
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.49
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.44
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.42
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.41
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.4
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.35
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.35
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.34
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.32
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.31
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.3
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.29
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.28
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.26
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.26
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.24
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.23
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.22
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.21
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.16
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.16
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.16
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.14
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.13
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.13
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.12
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.11
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.09
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.09
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.09
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.08
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.07
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.05
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.04
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.03
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.03
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.03
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.02
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.0
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.0
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.98
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.97
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.95
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.94
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.94
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.93
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.93
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.92
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.9
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.89
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.89
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.88
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.85
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.83
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.83
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.81
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.81
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.79
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.78
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.77
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.72
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.7
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.68
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.6
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.58
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.56
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.55
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.54
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.36
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.36
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.35
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.3
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.22
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.22
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.22
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.19
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.18
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.18
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.18
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.13
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.13
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.12
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.12
1lnq_A	336	MTHK channels, potassium channel related protein;	96.12
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.1
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.09
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.09
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.05
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.04
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.03
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.02
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.01
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.97
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.97
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.96
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.94
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.94
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.88
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.88
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.86
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.82
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.79
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.79
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.76
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.73
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	95.69
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.69
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.66
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.66
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.65
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.64
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.53
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.5

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.2e-41  Score=281.26  Aligned_cols=167  Identities=23%  Similarity=0.285  Sum_probs=157.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.      +.++.++.+|++|+++++++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~------g~~~~~~~~Dvt~~~~v~~~~~   76 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM------GKEVLGVKADVSKKKDVEEFVR   76 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998763      2578999999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+++|+||+||||||+.. ..++.++++|+|++++++|+.|+|+++|+++|+|+++++|+|||+||+++..+.     
T Consensus        77 ~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~-----  151 (254)
T 4fn4_A           77 RTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG-----  151 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS-----
T ss_pred             HHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC-----
Confidence            99999999999999999764 467899999999999999999999999999999999999999999999999988     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++..+|++||+|+.+|+|.
T Consensus       152 ----------~~~~~Y~asKaal~~ltr~  170 (254)
T 4fn4_A          152 ----------FAGAPYTVAKHGLIGLTRS  170 (254)
T ss_dssp             ----------SSCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCChHHHHHHHHHHHHHHH
Confidence                      8899999999999999984

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.8e-40  Score=276.83  Aligned_cols=168  Identities=21%  Similarity=0.233  Sum_probs=158.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.      +.++..+.+|++|++++++++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~------g~~~~~~~~Dv~~~~~v~~~~   77 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK------GYDAHGVAFDVTDELAIEAAF   77 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT------TCCEEECCCCTTCHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHH
Confidence            56899999999999999999999999999999999999999999999988773      247889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+++|+||+||||||+....++.++++|+|++++++|+.|+|+++|+++|+|+++ ++|+|||+||.++..+.    
T Consensus        78 ~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~----  153 (255)
T 4g81_D           78 SKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR----  153 (255)
T ss_dssp             HHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC----
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC----
Confidence            9999999999999999999988999999999999999999999999999999999764 67999999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +....|++||+|+.+|+|.
T Consensus       154 -----------~~~~~Y~asKaal~~ltr~  172 (255)
T 4g81_D          154 -----------PTVAPYTAAKGGIKMLTCS  172 (255)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchhHHHHHHHHHHHHHH
Confidence                       8999999999999999984

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.1e-38  Score=268.58  Aligned_cols=161  Identities=23%  Similarity=0.278  Sum_probs=151.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++..+.+|++|++++++++++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g---------~~~~~~~~Dv~~~~~v~~~~~~   96 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG---------GGAVGIQADSANLAELDRLYEK   96 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTCEEEECCTTCHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---------CCeEEEEecCCCHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999888877652         3678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|+||+||||||+....++.++++|+|++++++|+.|+|+++|+++|+|++  .|+|||+||.++..+.       
T Consensus        97 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~-------  167 (273)
T 4fgs_A           97 VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGT-------  167 (273)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCC-------
Confidence            9999999999999999988889999999999999999999999999999999976  4799999999999888       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              |....|++||+|+.+|+|.
T Consensus       168 --------~~~~~Y~asKaav~~ltr~  186 (273)
T 4fgs_A          168 --------PAFSVYAASKAALRSFARN  186 (273)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCchHHHHHHHHHHHHHHH
Confidence                    8999999999999999984

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=6.2e-38  Score=260.40  Aligned_cols=158  Identities=26%  Similarity=0.287  Sum_probs=146.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+||||||++|||+++|++|+++|++|++++|+++.+++..++          ..++..+.+|++|+++++++++++.+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~v~~~~~   71 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----------RPNLFYFHGDVADPLTLKKFVEYAME   71 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----------CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------cCCEEEEEecCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999998776554322          14688999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      ++|+||+||||||+....++.+++.|+|++++++|+.++|+++|+++|+|++++ |+|||+||..+..+.          
T Consensus        72 ~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~----------  140 (247)
T 3ged_A           72 KLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE----------  140 (247)
T ss_dssp             HHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC----------
Confidence            999999999999998888999999999999999999999999999999998865 999999999999887          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           |...+|++||+|+.+|+|.
T Consensus       141 -----~~~~~Y~asKaal~~ltk~  159 (247)
T 3ged_A          141 -----PDSEAYASAKGGIVALTHA  159 (247)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHH
T ss_pred             -----CCCHHHHHHHHHHHHHHHH
Confidence                 8999999999999999984

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-37  Score=258.20  Aligned_cols=162  Identities=24%  Similarity=0.330  Sum_probs=144.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .+++++||+++||||++|||+++|++|+++|++|++++|+.+  +++.+++.+.      +.++..+.+|++|+++++++
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~------g~~~~~~~~Dv~d~~~v~~~   74 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD------GGNASALLIDFADPLAAKDS   74 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT------TCCEEEEECCTTSTTTTTTS
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh------CCcEEEEEccCCCHHHHHHH
Confidence            346899999999999999999999999999999999999864  3455555552      25789999999999988776


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++     +|+||+||||||+....++.++++++|++++++|+.|+|+++|+++|+|++++ .|+|||+||+.+..+.   
T Consensus        75 ~~-----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~---  146 (247)
T 4hp8_A           75 FT-----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG---  146 (247)
T ss_dssp             ST-----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---
T ss_pred             HH-----hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC---
Confidence            53     48999999999999888999999999999999999999999999999998764 7999999999999988   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+.+|+|.
T Consensus       147 ------------~~~~~Y~asKaav~~ltr~  165 (247)
T 4hp8_A          147 ------------IRVPSYTAAKHGVAGLTKL  165 (247)
T ss_dssp             ------------SSCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCChHHHHHHHHHHHHHHH
Confidence                        8999999999999999984

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=6.8e-37  Score=256.05  Aligned_cols=164  Identities=24%  Similarity=0.271  Sum_probs=146.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+..+ ..+++.+.      +.++.++.+|++|+++++++++
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~v~   75 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR------QPRATYLPVELQDDAQCRDAVA   75 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH------CTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc------CCCEEEEEeecCCHHHHHHHHH
Confidence            3689999999999999999999999999999999999987654 34455443      1468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+++|+||+||||||+... ...+.+.|+|++.+++|+.++|+++|+++|+|+++ +|+|||+||+++..+.      
T Consensus        76 ~~~~~~G~iDiLVNnAGi~~~-~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~------  147 (258)
T 4gkb_A           76 QTIATFGRLDGLVNNAGVNDG-IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQ------  147 (258)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC-CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCC------
T ss_pred             HHHHHhCCCCEEEECCCCCCC-CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCC------
Confidence            999999999999999998654 44578999999999999999999999999999765 4999999999999888      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+.+|+|.
T Consensus       148 ---------~~~~~Y~asKaav~~ltr~  166 (258)
T 4gkb_A          148 ---------GNTSGYCASKGAQLALTRE  166 (258)
T ss_dssp             ---------SSCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchHHHHHHHHHHHHHHH
Confidence                     8999999999999999984

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-35  Score=248.19  Aligned_cols=172  Identities=20%  Similarity=0.273  Sum_probs=157.4

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      |.++.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..     ..++.++.+|++|+++++
T Consensus         2 p~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~~~~~v~   76 (262)
T 3pk0_A            2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-----SGKVIGVQTDVSDRAQCD   76 (262)
T ss_dssp             -CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-----SSCEEEEECCTTSHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-----CCcEEEEEcCCCCHHHHH
Confidence            456778999999999999999999999999999999999999999988888876531     147899999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFV  215 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~  215 (249)
                      ++++++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+. .+. 
T Consensus        77 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-  155 (262)
T 3pk0_A           77 ALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY-  155 (262)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC-
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-
Confidence            999999999999999999999988888899999999999999999999999999999999888999999999886 555 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|+|.
T Consensus       156 --------------~~~~~Y~asK~a~~~l~~~  174 (262)
T 3pk0_A          156 --------------PGWSHYGATKAAQLGFMRT  174 (262)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCChhhHHHHHHHHHHHHH
Confidence                          7889999999999999874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=4.5e-36  Score=247.89  Aligned_cols=153  Identities=33%  Similarity=0.383  Sum_probs=137.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++||+++||||++|||+++|++|+++|++|++++|+.+.+++.            ...++..+.+|++|++++++++++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~   75 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP------------RHPRIRREELDITDSQRLQRLFEA   75 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC------------CCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh------------hcCCeEEEEecCCCHHHHHHHHHh
Confidence            35899999999999999999999999999999999997765321            124788999999999999887764


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                          +|++|+||||||+.  .++.+++.++|++++++|+.|+|+++|+++|+|+++ +|+|||+||+.+..+.       
T Consensus        76 ----~g~iDiLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~-------  141 (242)
T 4b79_A           76 ----LPRLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGS-------  141 (242)
T ss_dssp             ----CSCCSEEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCC-------
T ss_pred             ----cCCCCEEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCC-------
Confidence                79999999999985  367889999999999999999999999999999765 4999999999999988       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+.+|+|.
T Consensus       142 --------~~~~~Y~asKaav~~ltr~  160 (242)
T 4b79_A          142 --------ADRPAYSASKGAIVQLTRS  160 (242)
T ss_dssp             --------SSCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCHHHHHHHHHHHHHHHH
Confidence                    8999999999999999984

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=4.9e-36  Score=251.46  Aligned_cols=160  Identities=21%  Similarity=0.275  Sum_probs=143.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.++.                ..+...+++|++++++++++
T Consensus         5 dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------~~~~~~~~~Dv~~~~~v~~~   68 (261)
T 4h15_A            5 EFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------------LPEELFVEADLTTKEGCAIV   68 (261)
T ss_dssp             CCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------------SCTTTEEECCTTSHHHHHHH
T ss_pred             hccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------------CCcEEEEEcCCCCHHHHHHH
Confidence            45689999999999999999999999999999999999985421                02345789999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          139 SEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++.+++|++|+||||||+..  ..++.++++|+|++++++|+.++++++|+++|+|+++++|+|||+||..+..+.+ 
T Consensus        69 ~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~-  147 (261)
T 4h15_A           69 AEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP-  147 (261)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC-
Confidence            9999999999999999999754  3578899999999999999999999999999999999999999999999988761 


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   .+...|++||+|+.+|+|.
T Consensus       148 -------------~~~~~Y~asKaal~~lt~~  166 (261)
T 4h15_A          148 -------------ESTTAYAAAKAALSTYSKA  166 (261)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CccHHHHHHHHHHHHHHHH
Confidence                         3678899999999999984

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3e-35  Score=247.36  Aligned_cols=170  Identities=22%  Similarity=0.291  Sum_probs=157.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.    .++.++.+|++|.+++++++
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~~~~~v~~~~   78 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG----ARLFASVCDVLDALQVRAFA   78 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT----CCEEEEECCTTCHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC----ceEEEEeCCCCCHHHHHHHH
Confidence            35688999999999999999999999999999999999999999988888764322    35889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.     
T Consensus        79 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  153 (265)
T 3lf2_A           79 EACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE-----  153 (265)
T ss_dssp             HHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC-----
Confidence            999999999999999999988788899999999999999999999999999999999888999999999999887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       154 ----------~~~~~Y~asKaa~~~l~~~  172 (265)
T 3lf2_A          154 ----------PHMVATSAARAGVKNLVRS  172 (265)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHH
T ss_pred             ----------CCchhhHHHHHHHHHHHHH
Confidence                      8899999999999999874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.5e-35  Score=245.82  Aligned_cols=167  Identities=25%  Similarity=0.269  Sum_probs=155.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~   80 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA------GGKAIGLECNVTDEQHREAVI   80 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHH
Confidence            45789999999999999999999999999999999999999998888887662      247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||+....++ +.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.     
T Consensus        81 ~~~~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  154 (256)
T 3gaf_A           81 KAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN-----  154 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-----
Confidence            9999999999999999999877777 8899999999999999999999999999999888999999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       155 ----------~~~~~Y~asKaa~~~~~~~  173 (256)
T 3gaf_A          155 ----------VRMASYGSSKAAVNHLTRN  173 (256)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCchHHHHHHHHHHHHHHH
Confidence                      8899999999999999874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-35  Score=247.52  Aligned_cols=165  Identities=24%  Similarity=0.334  Sum_probs=154.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++++++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~~~   75 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA------GGTALAQVLDVTDRHSVAAFAQAA   75 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999888888763      247889999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.+|++|+||||||+....++.+.+.++|++++++|+.|++.++++++|.|++++.|+||++||.++..+.        
T Consensus        76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~--------  147 (264)
T 3tfo_A           76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV--------  147 (264)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC--------
Confidence            999999999999999988888899999999999999999999999999999998888999999999999887        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|++||+|+++|+|.
T Consensus       148 -------~~~~~Y~asKaal~~l~~~  166 (264)
T 3tfo_A          148 -------PTAAVYCATKFAVRAISDG  166 (264)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------CCChhHHHHHHHHHHHHHH
Confidence                   8889999999999999874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.8e-35  Score=246.44  Aligned_cols=165  Identities=25%  Similarity=0.371  Sum_probs=153.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++..         +...+.+|++|++++++++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~Dv~d~~~v~~~~   74 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---------NGKGMALNVTNPESIEAVL   74 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---------GEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---------cceEEEEeCCCHHHHHHHH
Confidence            4568899999999999999999999999999999999999888877766643         5678899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.     
T Consensus        75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  149 (248)
T 3op4_A           75 KAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----  149 (248)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----
Confidence            999999999999999999988888899999999999999999999999999999998888999999999999887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       150 ----------~~~~~Y~asK~a~~~l~~~  168 (248)
T 3op4_A          150 ----------AGQANYAAAKAGVIGFTKS  168 (248)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCChHHHHHHHHHHHHHHH
Confidence                      8899999999999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=4.8e-35  Score=247.98  Aligned_cols=171  Identities=22%  Similarity=0.290  Sum_probs=153.0

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC------------hHHHHHHHHHHHHhhcCCCCCCceEE
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN------------LKAANELIQKWQEEWSGKGLPLNIEA  124 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~------------~~~~~~~~~~~~~~~~~~~~~~~v~~  124 (249)
                      |..+.+++||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.      +.++.+
T Consensus         2 p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~   75 (281)
T 3s55_A            2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT------GRRCIS   75 (281)
T ss_dssp             ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT------TCCEEE
T ss_pred             CCcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc------CCeEEE
Confidence            345678899999999999999999999999999999999997            55666666655542      247899


Q ss_pred             EEccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEE
Q 025705          125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIIN  204 (249)
Q Consensus       125 ~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~  204 (249)
                      +.+|++|+++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||+
T Consensus        76 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~  155 (281)
T 3s55_A           76 AKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVT  155 (281)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             EeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            99999999999999999999999999999999998888889999999999999999999999999999999888899999


Q ss_pred             EcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          205 VNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       205 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +||..+..+.               ++...|++||+|+++|+|.
T Consensus       156 isS~~~~~~~---------------~~~~~Y~asK~a~~~~~~~  184 (281)
T 3s55_A          156 VSSMLGHSAN---------------FAQASYVSSKWGVIGLTKC  184 (281)
T ss_dssp             ECCGGGGSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ECChhhcCCC---------------CCCchhHHHHHHHHHHHHH
Confidence            9999999887               8889999999999999874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4.2e-35  Score=244.88  Aligned_cols=165  Identities=19%  Similarity=0.181  Sum_probs=154.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++++
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~   77 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA------GGRIVARSLDARNEDEVTAFLNA   77 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEECcCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999998888763      24789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+. |++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.       
T Consensus        78 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  149 (252)
T 3h7a_A           78 ADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG-------  149 (252)
T ss_dssp             HHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC-------
T ss_pred             HHhh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC-------
Confidence            9998 99999999999988888899999999999999999999999999999999888999999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       150 --------~~~~~Y~asKaa~~~l~~~  168 (252)
T 3h7a_A          150 --------SGFAAFASAKFGLRAVAQS  168 (252)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCccHHHHHHHHHHHHHH
Confidence                    8899999999999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.9e-34  Score=239.69  Aligned_cols=169  Identities=24%  Similarity=0.312  Sum_probs=154.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccC--CCHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL--LSLDSVVR  137 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~v~~  137 (249)
                      ...++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++.++.+|+  +|.+++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~   81 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-----RQPQWFILDLLTCTSENCQQ   81 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----CCCEEEECCTTTCCHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----CCceEEEEecccCCHHHHHH
Confidence            3468999999999999999999999999999999999999999988888876432     2578889999  99999999


Q ss_pred             HHHHHhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++++.+.+|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.  
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--  159 (252)
T 3f1l_A           82 LAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR--  159 (252)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC--
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC--
Confidence            9999999999999999999985 3467888999999999999999999999999999999888999999999998887  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       160 -------------~~~~~Y~asK~a~~~l~~~  178 (252)
T 3f1l_A          160 -------------ANWGAYAASKFATEGMMQV  178 (252)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCchhHHHHHHHHHHHHH
Confidence                         8889999999999999874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5.2e-35  Score=246.83  Aligned_cols=167  Identities=19%  Similarity=0.262  Sum_probs=155.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++++
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~~   95 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV------GHDAEAVAFDVTSESEIIEAFA   95 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT------TCCEEECCCCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999888888662      2478899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.      
T Consensus        96 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~------  169 (271)
T 4ibo_A           96 RLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR------  169 (271)
T ss_dssp             HHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC------
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC------
Confidence            99999999999999999988888899999999999999999999999999999999888999999999998887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       170 ---------~~~~~Y~asKaa~~~l~~~  188 (271)
T 4ibo_A          170 ---------ATVAPYTVAKGGIKMLTRA  188 (271)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchhHHHHHHHHHHHHHH
Confidence                     8889999999999999874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.2e-34  Score=245.27  Aligned_cols=165  Identities=29%  Similarity=0.338  Sum_probs=152.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.         .++.++.+|++|.+++++++
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG---------SKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CceEEEEecCCCHHHHHHHH
Confidence            356789999999999999999999999999999999999988877766531         36889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.++..+.     
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  167 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI-----  167 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC-----
Confidence            999999999999999999988788889999999999999999999999999999999888999999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       168 ----------~~~~~Y~asKaa~~~l~~~  186 (277)
T 4dqx_A          168 ----------ADRTAYVASKGAISSLTRA  186 (277)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHH
T ss_pred             ----------CCChhHHHHHHHHHHHHHH
Confidence                      8899999999999999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.4e-35  Score=244.84  Aligned_cols=170  Identities=25%  Similarity=0.357  Sum_probs=156.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++.++.+|++|.++++++
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~~~~v~~~   88 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-----TDVHTVAIDLAEPDAPAEL   88 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTSTTHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHH
Confidence            34568999999999999999999999999999999999999999988888876332     4789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..++.+.   
T Consensus        89 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  165 (266)
T 4egf_A           89 ARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL---  165 (266)
T ss_dssp             HHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC---
Confidence            999999999999999999998888889999999999999999999999999999998865 6899999999998887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|+|.
T Consensus       166 ------------~~~~~Y~asK~a~~~l~~~  184 (266)
T 4egf_A          166 ------------PDHYAYCTSKAGLVMATKV  184 (266)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCChHHHHHHHHHHHHHHH
Confidence                        8889999999999999874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=4.9e-35  Score=243.72  Aligned_cols=164  Identities=21%  Similarity=0.295  Sum_probs=152.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.++++++++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~   72 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG---------KKARAIAADISDPGSVKALFA   72 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---------TTEEECCCCTTCHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CceEEEEcCCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999999988887766651         368899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+..+.     
T Consensus        73 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  147 (247)
T 3rwb_A           73 EIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-----  147 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----
Confidence            9999999999999999998888889999999999999999999999999999999866 6999999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       148 ----------~~~~~Y~asKaa~~~~~~~  166 (247)
T 3rwb_A          148 ----------PNMAAYVAAKGGVIGFTRA  166 (247)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCchhhHHHHHHHHHHHHH
Confidence                      8899999999999999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.4e-34  Score=242.29  Aligned_cols=167  Identities=21%  Similarity=0.331  Sum_probs=152.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+      .+.++.++.+|++|+++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~   75 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ------FPGQILTVQMDVRNTDDIQKMIE   75 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------STTCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------cCCcEEEEEccCCCHHHHHHHHH
Confidence            357899999999999999999999999999999999999988888777643      12478999999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhh-cCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLI-RGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~-~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|+ +++.|+||++||..+..+.     
T Consensus        76 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  150 (257)
T 3imf_A           76 QIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----  150 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----
Confidence            9999999999999999998888889999999999999999999999999999995 4557999999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       151 ----------~~~~~Y~asKaa~~~l~~~  169 (257)
T 3imf_A          151 ----------PGVIHSAAAKAGVLAMTKT  169 (257)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCcHHHHHHHHHHHHHHHH
Confidence                      8899999999999999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=9.7e-35  Score=245.83  Aligned_cols=170  Identities=19%  Similarity=0.230  Sum_probs=156.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .+..++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++.++.+|++|.++++++
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~   95 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-----RRCLPLSMDVRAPPAVMAA   95 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTCHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHH
Confidence            34568899999999999999999999999999999999999998888888865432     4789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..+.    
T Consensus        96 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----  171 (277)
T 4fc7_A           96 VDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ----  171 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC----
T ss_pred             HHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC----
Confidence            9999999999999999999887788889999999999999999999999999999998878999999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       172 -----------~~~~~Y~asKaa~~~l~~~  190 (277)
T 4fc7_A          172 -----------ALQVHAGSAKAAVDAMTRH  190 (277)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcHHHHHHHHHHHHHHHH
Confidence                       8889999999999999874

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-34  Score=244.80  Aligned_cols=168  Identities=20%  Similarity=0.233  Sum_probs=152.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-------------ChHHHHHHHHHHHHhhcCCCCCCceEEEE
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-------------NLKAANELIQKWQEEWSGKGLPLNIEAME  126 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  126 (249)
                      +.+++||+++||||++|||+++|++|+++|++|++++|             +.+++++..+++.+.      +.++.++.
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~   83 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ------GRKALTRV   83 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT------TCCEEEEE
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc------CCeEEEEE
Confidence            45789999999999999999999999999999999998             677777777666542      25789999


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEE
Q 025705          127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINV  205 (249)
Q Consensus       127 ~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~v  205 (249)
                      +|++|.++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++
T Consensus        84 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (280)
T 3pgx_A           84 LDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVV  163 (280)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            999999999999999999999999999999998888888999999999999999999999999999998865 7999999


Q ss_pred             cCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          206 NSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       206 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ||..+..+.               ++...|++||+|+++|+|.
T Consensus       164 sS~~~~~~~---------------~~~~~Y~asKaa~~~~~~~  191 (280)
T 3pgx_A          164 SSSAGLKAT---------------PGNGHYSASKHGLTALTNT  191 (280)
T ss_dssp             CCGGGTSCC---------------TTBHHHHHHHHHHHHHHHH
T ss_pred             cchhhccCC---------------CCchhHHHHHHHHHHHHHH
Confidence            999999887               8899999999999999874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=5.7e-35  Score=245.97  Aligned_cols=170  Identities=25%  Similarity=0.349  Sum_probs=143.7

Q ss_pred             cCCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH
Q 025705           55 QNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS  134 (249)
Q Consensus        55 ~~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  134 (249)
                      ..+..+.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|+++
T Consensus        17 ~g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~   87 (266)
T 3grp_A           17 QGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG---------KDVFVFSANLSDRKS   87 (266)
T ss_dssp             ----CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------SSEEEEECCTTSHHH
T ss_pred             CCCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CceEEEEeecCCHHH
Confidence            34556778999999999999999999999999999999999999988877755431         378999999999999


Q ss_pred             HHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          135 VVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       135 v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      ++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||.++..+.
T Consensus        88 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~  167 (266)
T 3grp_A           88 IKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN  167 (266)
T ss_dssp             HHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC
Confidence            99999999999999999999999987788889999999999999999999999999999998888999999999999887


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++...|++||+|+++|+|.
T Consensus       168 ---------------~~~~~Y~asKaa~~~~~~~  186 (266)
T 3grp_A          168 ---------------PGQTNYCAAKAGLIGFSKA  186 (266)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCchhHHHHHHHHHHHHHH
Confidence                           8889999999999999874

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-34  Score=245.07  Aligned_cols=168  Identities=23%  Similarity=0.237  Sum_probs=150.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|++++++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~   96 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA------GGQAIALEADVSDELQMRNAV   96 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT------TCCEEEEECCTTCHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHH
Confidence            45678999999999999999999999999999999999999888888777542      247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc--CCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV--GFVD  216 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~--~~~~  216 (249)
                      +++.+.+|++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..  +.  
T Consensus        97 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--  174 (283)
T 3v8b_A           97 RDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT--  174 (283)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS--
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC--
Confidence            9999999999999999998643 788899999999999999999999999999999998889999999998876  44  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       175 -------------~~~~~Y~asKaa~~~l~~~  193 (283)
T 3v8b_A          175 -------------PGATAYTATKAAQVAIVQQ  193 (283)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCchHHHHHHHHHHHHHHH
Confidence                         7889999999999999874

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=8e-35  Score=245.58  Aligned_cols=167  Identities=25%  Similarity=0.344  Sum_probs=155.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..      .++..+.+|++|.++++++++
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~   97 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG------LEGRGAVLNVNDATAVDALVE   97 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT------CCCEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEEeCCCHHHHHHHHH
Confidence            35789999999999999999999999999999999999999988888877631      367889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.++..+.      
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------  171 (270)
T 3ftp_A           98 STLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN------  171 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC------
Confidence            99999999999999999988788889999999999999999999999999999998888999999999998887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       172 ---------~~~~~Y~asKaa~~~l~~~  190 (270)
T 3ftp_A          172 ---------PGQVNYAAAKAGVAGMTRA  190 (270)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchhHHHHHHHHHHHHHH
Confidence                     8899999999999999874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.2e-34  Score=245.48  Aligned_cols=165  Identities=24%  Similarity=0.333  Sum_probs=151.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|++++++++
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~   94 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG---------CGAAACRVDVSDEQQIIAMV   94 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC---------SSCEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---------CcceEEEecCCCHHHHHHHH
Confidence            356889999999999999999999999999999999999988877766651         36789999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.     
T Consensus        95 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----  169 (277)
T 3gvc_A           95 DACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV-----  169 (277)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----
Confidence            999999999999999999988788889999999999999999999999999999999889999999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       170 ----------~~~~~Y~asKaa~~~l~~~  188 (277)
T 3gvc_A          170 ----------GGTGAYGMSKAGIIQLSRI  188 (277)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHH
T ss_pred             ----------CCchhHHHHHHHHHHHHHH
Confidence                      8899999999999999873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2e-34  Score=245.89  Aligned_cols=171  Identities=25%  Similarity=0.315  Sum_probs=156.2

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ..+.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..     ..++.++.+|++|.+++++
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~d~~~v~~  108 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-----AGNVIGVRLDVSDPGSCAD  108 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-----SSCEEEEECCTTCHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-----CCcEEEEEEeCCCHHHHHH
Confidence            34567899999999999999999999999999999999999999888887775521     1478899999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVD  216 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~  216 (249)
                      +++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+. .+.  
T Consensus       109 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~--  186 (293)
T 3rih_A          109 AARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY--  186 (293)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC--
Confidence            99999999999999999999988888899999999999999999999999999999999888999999999886 565  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       187 -------------~~~~~Y~asKaa~~~l~~~  205 (293)
T 3rih_A          187 -------------PGWSHYGASKAAQLGFMRT  205 (293)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCHHHHHHHHHHHHHHHH
Confidence                         7889999999999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-34  Score=242.75  Aligned_cols=167  Identities=20%  Similarity=0.259  Sum_probs=152.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-------------ChHHHHHHHHHHHHhhcCCCCCCceEEEEc
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-------------NLKAANELIQKWQEEWSGKGLPLNIEAMEL  127 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  127 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|             +.+.+++..+++...      +.++.++.+
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~   80 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA------NRRIVAAVV   80 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc------CCeEEEEEC
Confidence            3688999999999999999999999999999999998             667777777666552      247899999


Q ss_pred             cCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEc
Q 025705          128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVN  206 (249)
Q Consensus       128 D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vs  206 (249)
                      |++|.++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+|||+|
T Consensus        81 D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~is  160 (277)
T 3tsc_A           81 DTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILIS  160 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence            99999999999999999999999999999998888888999999999999999999999999999999865 68999999


Q ss_pred             CCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          207 SVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       207 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      |.++..+.               ++...|++||+|+++|+|.
T Consensus       161 S~~~~~~~---------------~~~~~Y~asKaa~~~~~~~  187 (277)
T 3tsc_A          161 SAAGMKMQ---------------PFMIHYTASKHAVTGLARA  187 (277)
T ss_dssp             CGGGTSCC---------------SSCHHHHHHHHHHHHHHHH
T ss_pred             cHhhCCCC---------------CCchhhHHHHHHHHHHHHH
Confidence            99998887               8889999999999999874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2e-34  Score=244.11  Aligned_cols=168  Identities=24%  Similarity=0.283  Sum_probs=151.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ...+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++
T Consensus        19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~   92 (279)
T 3sju_A           19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA------GHDVDGSSCDVTSTDEVHAAV   92 (279)
T ss_dssp             ------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHH
Confidence            34467899999999999999999999999999999999999998888887652      247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhch--hhhcCCCCeEEEEcCCccccCCCCc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFP--SLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~--~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|  .|++++.|+||++||.++..+.   
T Consensus        93 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~---  169 (279)
T 3sju_A           93 AAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV---  169 (279)
T ss_dssp             HHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC---
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC---
Confidence            99999999999999999998888889999999999999999999999999999  6888788999999999999887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|+|.
T Consensus       170 ------------~~~~~Y~asKaa~~~l~~~  188 (279)
T 3sju_A          170 ------------MYAAPYTASKHGVVGFTKS  188 (279)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCChhHHHHHHHHHHHHHH
Confidence                        8889999999999999874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.1e-34  Score=241.39  Aligned_cols=164  Identities=20%  Similarity=0.232  Sum_probs=151.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+.      +.++.++.+|++|.++++++++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~   76 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL------GVKVLVVKANVGQPAKIKEMFQQI   76 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            57999999999999999999999999999986 89988888888777652      247899999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..++.+.        
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  148 (258)
T 3oid_A           77 DETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL--------  148 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC--------
Confidence            999999999999999887788899999999999999999999999999999999888999999999998887        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|++||+|+++|+|.
T Consensus       149 -------~~~~~Y~asKaa~~~l~~~  167 (258)
T 3oid_A          149 -------ENYTTVGVSKAALEALTRY  167 (258)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------CCcHHHHHHHHHHHHHHHH
Confidence                   8899999999999999874

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.2e-34  Score=241.24  Aligned_cols=164  Identities=23%  Similarity=0.315  Sum_probs=151.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|+++++++++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~   74 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG---------PAAYAVQMDVTRQDSIDAAIA   74 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CCceEEEeeCCCHHHHHHHHH
Confidence            45789999999999999999999999999999999999988887776652         267899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++ .|+||++||.++..+.     
T Consensus        75 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  149 (259)
T 4e6p_A           75 ATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----  149 (259)
T ss_dssp             HHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----
Confidence            9999999999999999998778888999999999999999999999999999998765 7899999999999887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       150 ----------~~~~~Y~asK~a~~~~~~~  168 (259)
T 4e6p_A          150 ----------ALVAIYCATKAAVISLTQS  168 (259)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHH
T ss_pred             ----------CCChHHHHHHHHHHHHHHH
Confidence                      8889999999999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.8e-34  Score=239.56  Aligned_cols=172  Identities=26%  Similarity=0.360  Sum_probs=154.9

Q ss_pred             CCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           56 NPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        56 ~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .+.++.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++
T Consensus        20 ~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v   93 (262)
T 3rkr_A           20 DDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA------GGEAESHACDLSHSDAI   93 (262)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHH
T ss_pred             CcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh------CCceeEEEecCCCHHHH
Confidence            345567789999999999999999999999999999999999999998888887762      24789999999999999


Q ss_pred             HHHHHHHhccCCCccEEEecccc-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      +++++++.+.+|++|+||||||+ ...+++.+.+.+++++++++|+.+++.++++++|+|++++.|+||++||..+..+.
T Consensus        94 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  173 (262)
T 3rkr_A           94 AAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV  173 (262)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC
Confidence            99999999999999999999998 45567888999999999999999999999999999999888999999999998887


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++...|++||+|+++|++.
T Consensus       174 ---------------~~~~~Y~asKaa~~~l~~~  192 (262)
T 3rkr_A          174 ---------------ADGAAYTASKWGLNGLMTS  192 (262)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCchHHHHHHHHHHHHHH
Confidence                           8889999999999999874

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=4.7e-34  Score=237.71  Aligned_cols=165  Identities=24%  Similarity=0.385  Sum_probs=151.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|++++++++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~~~~~~~~~~~~   77 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA------GAKVHVLELDVADRQGVDAAVAS   77 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHH
Confidence            477899999999999999999999999999999999998888887777652      14688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++ |+||++||.++..+.       
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-------  149 (247)
T 2jah_A           78 TVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV-------  149 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-------
Confidence            999999999999999998777888999999999999999999999999999998877 999999999998877       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       150 --------~~~~~Y~asK~a~~~~~~~  168 (247)
T 2jah_A          150 --------RNAAVYQATKFGVNAFSET  168 (247)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCcHHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=3.3e-34  Score=240.07  Aligned_cols=167  Identities=13%  Similarity=0.135  Sum_probs=149.1

Q ss_pred             CCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        60 ~~~~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      +.+++||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++.+..     ..++.++++|++|++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~   75 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-----QPEAHLYQIDVQSDEEVIN   75 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-----CSSCEEEECCTTCHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCcEEEEEccCCCHHHHHH
Confidence            4678999999999875  99999999999999999999999988888877766532     1368899999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +++++.+++|++|+||||||+...    .++.+.+.++|+..+++|+.+++.+++.+.|+|.+  +|+|||+||.++..+
T Consensus        76 ~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~  153 (256)
T 4fs3_A           76 GFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFA  153 (256)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSC
T ss_pred             HHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccC
Confidence            999999999999999999997643    34567889999999999999999999999998765  489999999999988


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               +++..|++||+|+.+|+|.
T Consensus       154 ~---------------~~~~~Y~asKaal~~ltr~  173 (256)
T 4fs3_A          154 V---------------QNYNVMGVAKASLEANVKY  173 (256)
T ss_dssp             C---------------TTTHHHHHHHHHHHHHHHH
T ss_pred             c---------------ccchhhHHHHHHHHHHHHH
Confidence            8               8999999999999999984

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2e-34  Score=243.39  Aligned_cols=165  Identities=26%  Similarity=0.266  Sum_probs=148.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|++++++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~   93 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---------DDALCVPTDVTDPDSVRALF   93 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---------SCCEEEECCTTSHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------CCeEEEEecCCCHHHHHHHH
Confidence            456789999999999999999999999999999999999988887776652         36789999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcCCccccCCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++.+.+|++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|.|++++  .|+||++||..+..+.  
T Consensus        94 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--  171 (272)
T 4dyv_A           94 TATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR--  171 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC--
Confidence            9999999999999999998654 5788999999999999999999999999999999875  6899999999999887  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       172 -------------~~~~~Y~asKaa~~~l~~~  190 (272)
T 4dyv_A          172 -------------PYSAPYTATKHAITGLTKS  190 (272)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCchHHHHHHHHHHHHHHH
Confidence                         8899999999999999874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2e-34  Score=238.36  Aligned_cols=160  Identities=21%  Similarity=0.151  Sum_probs=142.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.++++++++++.
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~   72 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---------NAVIGIVADLAHHEDVDVAFAAAV   72 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------CCceEEECCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999988888776662         258899999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.+|++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++ |+||++||.++..+.         
T Consensus        73 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~---------  142 (235)
T 3l6e_A           73 EWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGK---------  142 (235)
T ss_dssp             HHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSC---------
T ss_pred             HhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCC---------
Confidence            9999999999999998777888999999999999999999999999999998865 599999999999887         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|++||+|+++|+|.
T Consensus       143 ------~~~~~Y~asKaa~~~~~~~  161 (235)
T 3l6e_A          143 ------ANESLYCASKWGMRGFLES  161 (235)
T ss_dssp             ------SSHHHHHHHHHHHHHHHHH
T ss_pred             ------CCCcHHHHHHHHHHHHHHH
Confidence                  8889999999999999874

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2e-34  Score=242.92  Aligned_cols=167  Identities=29%  Similarity=0.350  Sum_probs=152.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.      +.++.++.+|++|.+++++++
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~d~~~v~~~~   97 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA------GGEAFAVKADVSQESEVEALF   97 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHH
Confidence            4678999999999999999999999999999999998 666677777666552      247889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.     
T Consensus        98 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  172 (269)
T 4dmm_A           98 AAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN-----  172 (269)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----
Confidence            999999999999999999988788889999999999999999999999999999998888999999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       173 ----------~~~~~Y~asK~a~~~l~~~  191 (269)
T 4dmm_A          173 ----------PGQANYSAAKAGVIGLTKT  191 (269)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCchhHHHHHHHHHHHHHH
Confidence                      8899999999999999874

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.5e-34  Score=239.89  Aligned_cols=168  Identities=21%  Similarity=0.239  Sum_probs=146.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.....   .++.++.+|++|.+++++++++
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHV---QEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTS---CCCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcccc---CcceEEeccCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999999988887753221   3688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++ +.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.       
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  152 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF-------  152 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HHHhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC-------
Confidence            99999999999999999877777 7789999999999999999999999999998888999999999998866       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       153 --------~~~~~Y~asKaa~~~l~~~  171 (250)
T 3nyw_A          153 --------ADGGIYGSTKFALLGLAES  171 (250)
T ss_dssp             --------CCTTHHHHHHHHHHHHHHH
T ss_pred             --------CCCcchHHHHHHHHHHHHH
Confidence                    5688999999999999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.3e-34  Score=243.12  Aligned_cols=169  Identities=22%  Similarity=0.272  Sum_probs=152.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +.++.+|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+..     ..++.++.+|++|.++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-----SGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-----SSCEEEECCCTTCHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-----CCcEEEEeCCCCCHHHHHHH
Confidence            45688999999999999999999999999999999999 6667777776665421     24789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.    
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----  170 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS----  170 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC----
Confidence            9999999999999999999988888889999999999999999999999999999999888999999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       171 -----------~~~~~Y~asKaa~~~l~~~  189 (281)
T 3v2h_A          171 -----------PFKSAYVAAKHGIMGLTKT  189 (281)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHH
Confidence                       8889999999999999874

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.5e-34  Score=239.09  Aligned_cols=165  Identities=19%  Similarity=0.254  Sum_probs=152.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~   81 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT------GRRALSVGTDITDDAQVAHLVDE   81 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999888888763      24789999999999999999999


Q ss_pred             HhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.+|++|+||||||.. ...++.+.+.++|++++++|+.++++++++++|+|++++ |+||++||..+..+.      
T Consensus        82 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------  154 (264)
T 3ucx_A           82 TMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQ------  154 (264)
T ss_dssp             HHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCC------
T ss_pred             HHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCC------
Confidence            999999999999999985 556788999999999999999999999999999998865 999999999998887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       155 ---------~~~~~Y~asKaa~~~~~~~  173 (264)
T 3ucx_A          155 ---------AKYGAYKMAKSALLAMSQT  173 (264)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CccHHHHHHHHHHHHHHHH
Confidence                     8889999999999999874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-34  Score=242.74  Aligned_cols=169  Identities=21%  Similarity=0.208  Sum_probs=149.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     ..+.++.+|++|.+++++++
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~  102 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-----NIVRAVVCDVGDPDQVAALF  102 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CeEEEEEcCCCCHHHHHHHH
Confidence            3467899999999999999999999999999999999999999988888876422     23588999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcCCccccCCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++.+.+|++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|.|++++  .|+||++||..+..+.  
T Consensus       103 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--  180 (281)
T 4dry_A          103 AAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR--  180 (281)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC--
Confidence            9999999999999999998654 6788999999999999999999999999999999875  6899999999998887  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       181 -------------~~~~~Y~asKaa~~~l~~~  199 (281)
T 4dry_A          181 -------------PNSAPYTATKHAITGLTKS  199 (281)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCChhHHHHHHHHHHHHHH
Confidence                         8899999999999999874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-34  Score=243.82  Aligned_cols=168  Identities=27%  Similarity=0.326  Sum_probs=152.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+      .+.++.++.+|++|.+++++++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~   76 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG------GGGEAAALAGDVGDEALHEALV   76 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT------TTCCEEECCCCTTCHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh------cCCcEEEEECCCCCHHHHHHHH
Confidence            3568899999999999999999999999999999999999988888777654      1247889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCCc
Q 025705          140 EAWNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVDT  217 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~~  217 (249)
                      +++.+.+|++|+||||||+. ...++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+. .+.   
T Consensus        77 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  153 (280)
T 3tox_A           77 ELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGF---  153 (280)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCC---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCC---
Confidence            99999999999999999976 3467889999999999999999999999999999999888999999999887 555   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|+|.
T Consensus       154 ------------~~~~~Y~asKaa~~~l~~~  172 (280)
T 3tox_A          154 ------------AGVAPYAASKAGLIGLVQA  172 (280)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCchhHHHHHHHHHHHHHH
Confidence                        7889999999999999874

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=5.2e-34  Score=242.20  Aligned_cols=167  Identities=24%  Similarity=0.264  Sum_probs=150.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC----------------hHHHHHHHHHHHHhhcCCCCCCceEE
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN----------------LKAANELIQKWQEEWSGKGLPLNIEA  124 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~v~~  124 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+                .+.+++..+++...      +.++.+
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~   80 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH------NRRIVT   80 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT------TCCEEE
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc------CCceEE
Confidence            46889999999999999999999999999999999987                66666666665442      247899


Q ss_pred             EEccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeE
Q 025705          125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGE-PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRI  202 (249)
Q Consensus       125 ~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~I  202 (249)
                      +.+|++|.++++++++++.+.+|++|+||||||+..... +.+.+.++|++++++|+.++++++++++|+|++++ .|+|
T Consensus        81 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i  160 (286)
T 3uve_A           81 AEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSI  160 (286)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEE
Confidence            999999999999999999999999999999999876654 78899999999999999999999999999998865 6899


Q ss_pred             EEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          203 INVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       203 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ||+||..+..+.               ++...|++||+|+++|+|.
T Consensus       161 v~isS~~~~~~~---------------~~~~~Y~asKaa~~~~~~~  191 (286)
T 3uve_A          161 ILTSSVGGLKAY---------------PHTGHYVAAKHGVVGLMRA  191 (286)
T ss_dssp             EEECCGGGTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             EEECchhhccCC---------------CCccHHHHHHHHHHHHHHH
Confidence            999999999887               8899999999999999874

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=9.1e-34  Score=242.38  Aligned_cols=167  Identities=20%  Similarity=0.267  Sum_probs=151.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC------------hHHHHHHHHHHHHhhcCCCCCCceEEEEcc
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN------------LKAANELIQKWQEEWSGKGLPLNIEAMELD  128 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  128 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.      +.++.++.+|
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D   97 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL------GRRIIASQVD   97 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEEEEECC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc------CCceEEEECC
Confidence            36889999999999999999999999999999999987            67777777776652      2478999999


Q ss_pred             CCCHHHHHHHHHHHhccCCCccEEEeccccCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEc
Q 025705          129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGE-PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVN  206 (249)
Q Consensus       129 ~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vs  206 (249)
                      ++|.++++++++++.+.+|++|+||||||+..... +.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++|
T Consensus        98 v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~is  177 (299)
T 3t7c_A           98 VRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTS  177 (299)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            99999999999999999999999999999876654 88899999999999999999999999999988764 78999999


Q ss_pred             CCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          207 SVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       207 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      |.++..+.               ++...|++||+|+++|+|.
T Consensus       178 S~~~~~~~---------------~~~~~Y~asKaa~~~l~~~  204 (299)
T 3t7c_A          178 SIGGLRGA---------------ENIGNYIASKHGLHGLMRT  204 (299)
T ss_dssp             CGGGTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ChhhccCC---------------CCcchHHHHHHHHHHHHHH
Confidence            99999887               8899999999999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-34  Score=244.67  Aligned_cols=168  Identities=20%  Similarity=0.330  Sum_probs=154.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA---HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~---~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +++||++|||||++|||+++|++|+++|+   +|++++|+.+++++..+++.+..+.    .++.++.+|++|.++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~d~~~v~~~  105 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN----AKVHVAQLDITQAEKIKPF  105 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT----CEEEEEECCTTCGGGHHHH
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC----CeEEEEECCCCCHHHHHHH
Confidence            36789999999999999999999999998   9999999999999998888765322    4789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.++..+.   
T Consensus       106 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~---  182 (287)
T 3rku_A          106 IENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY---  182 (287)
T ss_dssp             HHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC---
Confidence            9999999999999999999875 567889999999999999999999999999999998888999999999999887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|+|.
T Consensus       183 ------------~~~~~Y~asKaa~~~l~~~  201 (287)
T 3rku_A          183 ------------PTGSIYCASKFAVGAFTDS  201 (287)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCchHHHHHHHHHHHHHH
Confidence                        8899999999999999874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5e-34  Score=241.79  Aligned_cols=170  Identities=22%  Similarity=0.240  Sum_probs=154.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...   ...++.++.+|++|+++++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~   83 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA---NGGAIRYEPTDITNEDETARAVD   83 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC---SSCEEEEEECCTTSHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC---CCceEEEEeCCCCCHHHHHHHHH
Confidence            367899999999999999999999999999999999999999888888876321   11378999999999999999999


Q ss_pred             HHhccCCCccEEEecccc-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.+|++|+||||||. ....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.     
T Consensus        84 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  158 (281)
T 3svt_A           84 AVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH-----  158 (281)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC-----
Confidence            999999999999999997 45567889999999999999999999999999999999888999999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       159 ----------~~~~~Y~asK~a~~~l~~~  177 (281)
T 3svt_A          159 ----------RWFGAYGVTKSAVDHLMQL  177 (281)
T ss_dssp             ----------TTCTHHHHHHHHHHHHHHH
T ss_pred             ----------CCChhHHHHHHHHHHHHHH
Confidence                      7889999999999999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=7e-34  Score=239.13  Aligned_cols=171  Identities=21%  Similarity=0.259  Sum_probs=153.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...    +.++.++.+|++|.++++++
T Consensus         7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~   82 (267)
T 1iy8_A            7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP----DAEVLTTVADVSDEAQVEAY   82 (267)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT----TCCEEEEECCTTSHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC----CceEEEEEccCCCHHHHHHH
Confidence            34568899999999999999999999999999999999999888888777765321    14688999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.+|++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.   
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  159 (267)
T 1iy8_A           83 VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---  159 (267)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC---
Confidence            99999999999999999998765 67788999999999999999999999999999998878999999999988876   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|+|.
T Consensus       160 ------------~~~~~Y~asK~a~~~~~~~  178 (267)
T 1iy8_A          160 ------------GNQSGYAAAKHGVVGLTRN  178 (267)
T ss_dssp             ------------SSBHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCccHHHHHHHHHHHHHH
Confidence                        7889999999999999874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-33  Score=238.23  Aligned_cols=172  Identities=28%  Similarity=0.397  Sum_probs=152.8

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +.+..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++.++.+|++|.++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~v~   87 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-----VETMAFRCDVSNYEEVK   87 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTCHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CeEEEEEcCCCCHHHHH
Confidence            3445678999999999999999999999999999999999999888888777733221     36788999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc-cccCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM-HYVGFV  215 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~-~~~~~~  215 (249)
                      ++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.. +..+. 
T Consensus        88 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-  166 (267)
T 1vl8_A           88 KLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM-  166 (267)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS-
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC-
Confidence            9999999999999999999999877788889999999999999999999999999999988889999999998 77666 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|+|.
T Consensus       167 --------------~~~~~Y~asK~a~~~~~~~  185 (267)
T 1vl8_A          167 --------------PNISAYAASKGGVASLTKA  185 (267)
T ss_dssp             --------------SSCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCChhHHHHHHHHHHHHHH
Confidence                          7888999999999999874

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=7.8e-34  Score=244.74  Aligned_cols=169  Identities=22%  Similarity=0.293  Sum_probs=152.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC------------hHHHHHHHHHHHHhhcCCCCCCceEEEE
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN------------LKAANELIQKWQEEWSGKGLPLNIEAME  126 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~  126 (249)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.      +.++.++.
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  113 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ------GRRIIARQ  113 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEEEEE
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc------CCeEEEEE
Confidence            4567899999999999999999999999999999999886            66677766666552      24789999


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEE
Q 025705          127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINV  205 (249)
Q Consensus       127 ~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~v  205 (249)
                      +|++|.++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++ .|+||++
T Consensus       114 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~i  193 (317)
T 3oec_A          114 ADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFV  193 (317)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            999999999999999999999999999999998888889999999999999999999999999999998875 6899999


Q ss_pred             cCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          206 NSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       206 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ||..++.+.               ++...|++||+|+++|+|.
T Consensus       194 sS~~~~~~~---------------~~~~~Y~asKaa~~~l~~~  221 (317)
T 3oec_A          194 SSTVGLRGA---------------PGQSHYAASKHGVQGLMLS  221 (317)
T ss_dssp             CCGGGSSCC---------------TTBHHHHHHHHHHHHHHHH
T ss_pred             CcHHhcCCC---------------CCCcchHHHHHHHHHHHHH
Confidence            999999887               8899999999999999874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=4.5e-34  Score=239.01  Aligned_cols=163  Identities=25%  Similarity=0.345  Sum_probs=149.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.         .++.++.+|++|.+++++++
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~   73 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---------PRVHALRSDIADLNEIAVLG   73 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CcceEEEccCCCHHHHHHHH
Confidence            346889999999999999999999999999999999999988877766652         37889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++  .|+|||+||.++..+.     
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~-----  146 (255)
T 4eso_A           74 AAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGH-----  146 (255)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBC-----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCC-----
Confidence            999999999999999999988788899999999999999999999999999999976  4899999999998887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       147 ----------~~~~~Y~asKaa~~~~~~~  165 (255)
T 4eso_A          147 ----------PGMSVYSASKAALVSFASV  165 (255)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHH
T ss_pred             ----------CCchHHHHHHHHHHHHHHH
Confidence                      8899999999999999874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.5e-34  Score=237.61  Aligned_cols=165  Identities=25%  Similarity=0.344  Sum_probs=150.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +.+|+++||||++|||+++|++|+++|++|+++++ +.+.+++..+++.+.      +.++.++.+|++|.+++++++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~   75 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK------GVDSFAIQANVADADEVKAMIKE   75 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHH
Confidence            46799999999999999999999999999999887 556777777776652      24788999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.       
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  148 (246)
T 3osu_A           76 VVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN-------  148 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-------
Confidence            9999999999999999988788899999999999999999999999999999998888999999999998887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       149 --------~~~~~Y~~sK~a~~~~~~~  167 (246)
T 3osu_A          149 --------PGQANYVATKAGVIGLTKS  167 (246)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCChHHHHHHHHHHHHHHH
Confidence                    8899999999999999874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.4e-34  Score=243.21  Aligned_cols=168  Identities=23%  Similarity=0.319  Sum_probs=155.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~   99 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ------GFDAHGVVCDVRHLDEMVRLA   99 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHH
Confidence            34588999999999999999999999999999999999999999888888763      247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+.+|++|+||||||+...+++.+.+.+++++++++|+.|++.++++++|+|++++ .|+||++||.+++.+.    
T Consensus       100 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  175 (301)
T 3tjr_A          100 DEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN----  175 (301)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC----
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----
Confidence            99999999999999999998878888999999999999999999999999999999876 7899999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       176 -----------~~~~~Y~asKaa~~~~~~~  194 (301)
T 3tjr_A          176 -----------AGLGTYGVAKYGVVGLAET  194 (301)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHH
Confidence                       8899999999999999874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=3.2e-34  Score=242.30  Aligned_cols=166  Identities=20%  Similarity=0.235  Sum_probs=150.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-------HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-------ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS  134 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  134 (249)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...      +.++.++.+|++|.++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~   76 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA------GGQGLALKCDIREEDQ   76 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH------TSEEEEEECCTTCHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc------CCeEEEEeCCCCCHHH
Confidence            5789999999999999999999999999999999998754       55555555442      2478999999999999


Q ss_pred             HHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC-
Q 025705          135 VVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG-  213 (249)
Q Consensus       135 v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~-  213 (249)
                      ++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+ 
T Consensus        77 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  156 (274)
T 3e03_A           77 VRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA  156 (274)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC
Confidence            9999999999999999999999998888888999999999999999999999999999999988899999999988876 


Q ss_pred             -CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 -FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 -~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       .               ++...|++||+|+++|+|.
T Consensus       157 ~~---------------~~~~~Y~asKaal~~l~~~  177 (274)
T 3e03_A          157 WW---------------GAHTGYTLAKMGMSLVTLG  177 (274)
T ss_dssp             HH---------------HHCHHHHHHHHHHHHHHHH
T ss_pred             CC---------------CCCchHHHHHHHHHHHHHH
Confidence             4               6788899999999999874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=8.3e-34  Score=241.08  Aligned_cols=168  Identities=15%  Similarity=0.181  Sum_probs=151.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH-------HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-------AANELIQKWQEEWSGKGLPLNIEAMELDLLSLD  133 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  133 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+.      +.++.++.+|++|.+
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~   78 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA------GGQALPIVGDIRDGD   78 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH------TSEEEEEECCTTSHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc------CCcEEEEECCCCCHH
Confidence            3578999999999999999999999999999999999976       456666666553      247899999999999


Q ss_pred             HHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          134 SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       134 ~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+
T Consensus        79 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  158 (285)
T 3sc4_A           79 AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP  158 (285)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC
Confidence            99999999999999999999999998888899999999999999999999999999999999988899999999988766


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..              ++...|++||+|+++|+|.
T Consensus       159 ~~--------------~~~~~Y~asKaal~~~~~~  179 (285)
T 3sc4_A          159 KW--------------LRPTPYMMAKYGMTLCALG  179 (285)
T ss_dssp             GG--------------SCSHHHHHHHHHHHHHHHH
T ss_pred             CC--------------CCCchHHHHHHHHHHHHHH
Confidence            31              5668899999999999874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-33  Score=234.48  Aligned_cols=166  Identities=23%  Similarity=0.336  Sum_probs=154.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   75 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK------GFKARGLVLNISDIESIQNFFAE   75 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEecCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999999988888887663      24789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||+....++.+.+.+++++++++|+.+++.++++++|+|++++.|+||++||..+..+.       
T Consensus        76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  148 (247)
T 3lyl_A           76 IKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN-------  148 (247)
T ss_dssp             HHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-------
Confidence            9999999999999999988888889999999999999999999999999999999888999999999998887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       149 --------~~~~~Y~~sK~a~~~~~~~  167 (247)
T 3lyl_A          149 --------PGQTNYCAAKAGVIGFSKS  167 (247)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCcHHHHHHHHHHHHHHHH
Confidence                    8899999999999999874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=9.9e-34  Score=239.61  Aligned_cols=169  Identities=21%  Similarity=0.275  Sum_probs=153.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.      +.++.++.+|++|.++++++++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~d~~~v~~~~~  101 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV------GGKALPIRCDVTQPDQVRGMLD  101 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT------TCCCEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHHH
Confidence            4688999999999999999999999999999999999999998888887652      2478899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+++|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+..+...   
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~---  178 (276)
T 3r1i_A          102 QMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP---  178 (276)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC---
Confidence            9999999999999999998888888999999999999999999999999999999876 489999999988766411   


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       179 ----------~~~~~Y~asKaa~~~l~~~  197 (276)
T 3r1i_A          179 ----------QQVSHYCTSKAAVVHLTKA  197 (276)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCcchHHHHHHHHHHHHHH
Confidence                      3678899999999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=7.8e-34  Score=239.53  Aligned_cols=164  Identities=23%  Similarity=0.246  Sum_probs=150.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.++++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~   77 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG---------RGAVHHVVDLTNEVSVRALID   77 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC---------TTCEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC---------CCeEEEECCCCCHHHHHHHHH
Confidence            36889999999999999999999999999999999999988887776651         367889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          141 AWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++.+.+|++|+||||||+..  ..++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.    
T Consensus        78 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----  153 (271)
T 3tzq_B           78 FTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY----  153 (271)
T ss_dssp             HHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC----
Confidence            99999999999999999863  445678899999999999999999999999999999888999999999998887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       154 -----------~~~~~Y~asKaa~~~l~~~  172 (271)
T 3tzq_B          154 -----------DMSTAYACTKAAIETLTRY  172 (271)
T ss_dssp             -----------SSCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCChHHHHHHHHHHHHHHH
Confidence                       8889999999999999874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2.9e-33  Score=234.53  Aligned_cols=167  Identities=28%  Similarity=0.380  Sum_probs=152.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|+++++++++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   78 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK------GFKVEASVCDLSSRSERQELMN   78 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888887777652      2478899999999999999999


Q ss_pred             HHhccC-CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~-g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.     
T Consensus        79 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  153 (260)
T 2ae2_A           79 TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV-----  153 (260)
T ss_dssp             HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----
Confidence            999999 89999999999887777888999999999999999999999999999998888999999999988776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|++.
T Consensus       154 ----------~~~~~Y~~sK~a~~~~~~~  172 (260)
T 2ae2_A          154 ----------PYEAVYGATKGAMDQLTRC  172 (260)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCcchHHHHHHHHHHHHHH
Confidence                      7888999999999999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-33  Score=236.75  Aligned_cols=167  Identities=31%  Similarity=0.424  Sum_probs=153.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|+++++++++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   90 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK------GLNVEGSVCDLLSRTERDKLMQ   90 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888887777652      2468899999999999999999


Q ss_pred             HHhccC-CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~-g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.+ +++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.+++.+.     
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  165 (273)
T 1ae1_A           91 TVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----  165 (273)
T ss_dssp             HHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----
Confidence            999999 89999999999987778889999999999999999999999999999998778999999999998876     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|++.
T Consensus       166 ----------~~~~~Y~asK~a~~~~~~~  184 (273)
T 1ae1_A          166 ----------PSVSLYSASKGAINQMTKS  184 (273)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCcchhHHHHHHHHHHHHH
Confidence                      7889999999999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1e-33  Score=235.39  Aligned_cols=165  Identities=24%  Similarity=0.358  Sum_probs=150.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++|+++||||++|||+++|++|+++|++|++++| +.+++++..+++.+.      +.++.++.+|++|++++++++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   75 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL------GSDAIAVRADVANAEDVTNMVKQ   75 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999 888887777777552      14688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.       
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  148 (246)
T 2uvd_A           76 TVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-------  148 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-------
Confidence            9999999999999999887777888999999999999999999999999999998778999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       149 --------~~~~~Y~asK~a~~~~~~~  167 (246)
T 2uvd_A          149 --------PGQANYVAAKAGVIGLTKT  167 (246)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------CCCchHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1e-33  Score=239.43  Aligned_cols=166  Identities=20%  Similarity=0.234  Sum_probs=152.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~~~~~~~  102 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS------GGTAQELAGDLSEAGAGTDLIE  102 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT------TCCEEEEECCTTSTTHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999999999988888887662      2478999999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+. +++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.      
T Consensus       103 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~------  175 (275)
T 4imr_A          103 RAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK------  175 (275)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------
T ss_pred             HHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC------
Confidence            99887 89999999999987788889999999999999999999999999999998888999999999988766      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       176 ---------~~~~~Y~asKaa~~~l~~~  194 (275)
T 4imr_A          176 ---------SVVTAYAATKAAQHNLIQS  194 (275)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchhhHHHHHHHHHHHHH
Confidence                     7788899999999999874

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.8e-33  Score=241.54  Aligned_cols=170  Identities=22%  Similarity=0.302  Sum_probs=155.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.....    ..++.++.+|++|.+++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dl~~~~~v~~~~   78 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS----GPEVMGVQLDVASREGFKMAA   78 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CCeEEEEECCCCCHHHHHHHH
Confidence            4567899999999999999999999999999999999999999988888876421    137899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC------CCCeEEEEcCCccccC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG------SPSRIINVNSVMHYVG  213 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~~g~Iv~vsS~~~~~~  213 (249)
                      +++.+.+|++|+||||||+...+++.+.+.+++++++++|+.|++.++++++|.|.++      +.|+||++||.+++.+
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~  158 (319)
T 3ioy_A           79 DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA  158 (319)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC
Confidence            9999999999999999999888889999999999999999999999999999999875      5799999999999988


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               ++...|++||+|+++|++.
T Consensus       159 ~---------------~~~~~Y~aSKaal~~~~~~  178 (319)
T 3ioy_A          159 A---------------GSPGIYNTTKFAVRGLSES  178 (319)
T ss_dssp             C---------------SSSHHHHHHHHHHHHHHHH
T ss_pred             C---------------CCCHHHHHHHHHHHHHHHH
Confidence            7               8889999999999999863

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-33  Score=239.47  Aligned_cols=168  Identities=22%  Similarity=0.301  Sum_probs=143.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +.++++|+++||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.      +.++.++.+|++|+++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~   97 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL------GARVIFLRADLADLSSHQAT   97 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT------TCCEEEEECCTTSGGGHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHH
Confidence            45678999999999999999999999999999999995 777777777777652      24789999999999999999


Q ss_pred             HHHHhccCCCccEEEecccc--CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC---CCeEEEEcCCccccC
Q 025705          139 SEAWNGRLGPLHVLINNAGI--FSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS---PSRIINVNSVMHYVG  213 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~--~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~g~Iv~vsS~~~~~~  213 (249)
                      ++++.+.+|++|+||||||+  ....++.+.+.++|++++++|+.++++++++++|+|++++   .|+||++||.++..+
T Consensus        98 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  177 (280)
T 4da9_A           98 VDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT  177 (280)
T ss_dssp             HHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----
T ss_pred             HHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC
Confidence            99999999999999999998  4456788999999999999999999999999999998765   789999999999988


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               ++...|++||+|+++|+|.
T Consensus       178 ~---------------~~~~~Y~asKaa~~~l~~~  197 (280)
T 4da9_A          178 S---------------PERLDYCMSKAGLAAFSQG  197 (280)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHH
T ss_pred             C---------------CCccHHHHHHHHHHHHHHH
Confidence            7               8889999999999999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-33  Score=235.42  Aligned_cols=171  Identities=21%  Similarity=0.234  Sum_probs=149.6

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE-cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~-r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      +.+....++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++.+.      +.++.++.+|++|.+++
T Consensus         5 ~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v   78 (256)
T 3ezl_A            5 HHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL------GFDFYASEGNVGDWDST   78 (256)
T ss_dssp             --------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT------TCCCEEEECCTTCHHHH
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCeeEEEecCCCCHHHH
Confidence            4455678899999999999999999999999999999988 6666677777666552      24788999999999999


Q ss_pred             HHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++++++.+.++++|+||||||+....++.+.+.+++++++++|+.+++.++++++|+|++++.|+||++||.++..+. 
T Consensus        79 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-  157 (256)
T 3ezl_A           79 KQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-  157 (256)
T ss_dssp             HHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC-
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC-
Confidence            9999999999999999999999988788889999999999999999999999999999999888999999999999887 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       158 --------------~~~~~Y~asK~a~~~~~~~  176 (256)
T 3ezl_A          158 --------------FGQTNYSTAKAGIHGFTMS  176 (256)
T ss_dssp             --------------SCCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCcccHHHHHHHHHHHHH
Confidence                          8899999999999999874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-33  Score=236.58  Aligned_cols=167  Identities=29%  Similarity=0.371  Sum_probs=148.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+ +.+++..+++.+.      +.++.++.+|++|.++++++
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~   97 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG------GGSAEAVVADLADLEGAANV   97 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT------TCEEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHH
Confidence            4467899999999999999999999999999999999966 4556666666541      25789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      .+.+ +.++++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.    
T Consensus        98 ~~~~-~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----  172 (273)
T 3uf0_A           98 AEEL-AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG----  172 (273)
T ss_dssp             HHHH-HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----
T ss_pred             HHHH-HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC----
Confidence            5554 45689999999999988888899999999999999999999999999999999888999999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       173 -----------~~~~~Y~asKaa~~~l~~~  191 (273)
T 3uf0_A          173 -----------RNVAAYAASKHAVVGLTRA  191 (273)
T ss_dssp             -----------SSCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCChhHHHHHHHHHHHHHH
Confidence                       8889999999999999874

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.3e-33  Score=243.50  Aligned_cols=171  Identities=19%  Similarity=0.235  Sum_probs=152.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-------HHHHHHHHHHhhcCCCCCCceEEEEccCCC
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-------ANELIQKWQEEWSGKGLPLNIEAMELDLLS  131 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  131 (249)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++.+.      +.++.++.+|++|
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~------g~~~~~~~~Dv~d  112 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV------GGKALPCIVDVRD  112 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT------TCEEEEEECCTTC
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc------CCeEEEEEccCCC
Confidence            4457899999999999999999999999999999999999764       45555565542      2578999999999


Q ss_pred             HHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          132 LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       132 ~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      +++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+.
T Consensus       113 ~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~  192 (346)
T 3kvo_A          113 EQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNL  192 (346)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHc
Confidence            99999999999999999999999999988888899999999999999999999999999999999888999999999988


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+.             ..++...|++||+|+++|++.
T Consensus       193 ~~~-------------~~~~~~~Y~aSKaal~~l~~~  216 (346)
T 3kvo_A          193 NPV-------------WFKQHCAYTIAKYGMSMYVLG  216 (346)
T ss_dssp             CGG-------------GTSSSHHHHHHHHHHHHHHHH
T ss_pred             CCC-------------CCCCchHHHHHHHHHHHHHHH
Confidence            762             017888999999999999874

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.5e-33  Score=236.56  Aligned_cols=164  Identities=18%  Similarity=0.261  Sum_probs=142.0

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ....++++|++|||||++|||+++|++|+++|++|++++|+.+++.+..   .+        ..+.++.+|++|.+++++
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~--------~~~~~~~~Dv~~~~~v~~   88 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL---RQ--------AGAVALYGDFSCETGIMA   88 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHH---HH--------HTCEEEECCTTSHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---Hh--------cCCeEEECCCCCHHHHHH
Confidence            3445688999999999999999999999999999999999987654333   22        136788999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++++.+.+|++|+||||||+..... .+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.   
T Consensus        89 ~~~~~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---  164 (260)
T 3gem_A           89 FIDLLKTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS---  164 (260)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC---
T ss_pred             HHHHHHHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC---
Confidence            99999999999999999999876554 56788999999999999999999999999999888999999999998887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|+|.
T Consensus       165 ------------~~~~~Y~asKaa~~~l~~~  183 (260)
T 3gem_A          165 ------------SKHIAYCATKAGLESLTLS  183 (260)
T ss_dssp             ------------SSCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCcHhHHHHHHHHHHHHHH
Confidence                        8889999999999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-33  Score=236.80  Aligned_cols=163  Identities=21%  Similarity=0.238  Sum_probs=140.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.         .++.++.+|++|.+++++++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~   74 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG---------AAVRFRNADVTNEADATAALAF   74 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------------CEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---------CceEEEEccCCCHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988877766552         3678999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCC----CCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC------CCCeEEEEcCCccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQ----KFSKDGYEEHMQVNHLAPALLSILLFPSLIRG------SPSRIINVNSVMHY  211 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~~g~Iv~vsS~~~~  211 (249)
                      +.+++|++|+||||||+....++.    +.+.++|++++++|+.+++.++++++|+|+++      +.|+||++||..++
T Consensus        75 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tpc_A           75 AKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF  154 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhc
Confidence            999999999999999987655443    67889999999999999999999999999885      67899999999999


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+.               ++...|++||+|+++|+|.
T Consensus       155 ~~~---------------~~~~~Y~asKaa~~~~~~~  176 (257)
T 3tpc_A          155 DGQ---------------IGQAAYAASKGGVAALTLP  176 (257)
T ss_dssp             HCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             cCC---------------CCCcchHHHHHHHHHHHHH
Confidence            887               8889999999999999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1.6e-33  Score=237.14  Aligned_cols=160  Identities=21%  Similarity=0.309  Sum_probs=145.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+.+++++..            ..++.++.+|++|.+++++++++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------------~~~~~~~~~Dv~d~~~v~~~~~~   80 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------------LPNTLCAQVDVTDKYTFDTAITR   80 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------------cCCceEEEecCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999977654331            12678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.|++.++++++|.|++++.|+||++||.+++.+.       
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------  153 (266)
T 3p19_A           81 AEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-------  153 (266)
T ss_dssp             HHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-------
T ss_pred             HHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-------
Confidence            9999999999999999988888899999999999999999999999999999998888999999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       154 --------~~~~~Y~asK~a~~~~~~~  172 (266)
T 3p19_A          154 --------PDHAAYCGTKFAVHAISEN  172 (266)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCchHHHHHHHHHHHHHH
Confidence                    8889999999999999874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.1e-33  Score=234.74  Aligned_cols=163  Identities=22%  Similarity=0.242  Sum_probs=148.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++         +.++.++.+|++|.+++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~   72 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---------GDAARYQHLDVTIEEDWQRVVAY   72 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---------GGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------CCceeEEEecCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999988776665443         13678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..++.+.       
T Consensus        73 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  145 (254)
T 1hdc_A           73 AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-------  145 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-------
Confidence            9999999999999999887777888999999999999999999999999999998878999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       146 --------~~~~~Y~asK~a~~~~~~~  164 (254)
T 1hdc_A          146 --------ALTSSYGASKWGVRGLSKL  164 (254)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCchhHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=3.8e-33  Score=234.76  Aligned_cols=165  Identities=25%  Similarity=0.347  Sum_probs=150.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+....    ..+..+.+|+++.++++++++
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~D~~~~~~~~~~~~   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD----AILQPVVADLGTEQGCQDVIE   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTT----CEEEEEECCTTSHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC----ceEEEEecCCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999998888775322    468889999999999887765


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +    ++++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..++.+.      
T Consensus        82 ~----~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  151 (267)
T 3t4x_A           82 K----YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS------  151 (267)
T ss_dssp             H----CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC------
T ss_pred             h----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC------
Confidence            4    689999999999988888899999999999999999999999999999999888999999999999887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       152 ---------~~~~~Y~asKaa~~~l~~~  170 (267)
T 3t4x_A          152 ---------QEMAHYSATKTMQLSLSRS  170 (267)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CcchHHHHHHHHHHHHHHH
Confidence                     8899999999999999874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=4.7e-33  Score=233.49  Aligned_cols=167  Identities=22%  Similarity=0.293  Sum_probs=152.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++.++.+|++|.+++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~D~~~~~~~~~~~~~   78 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-----VRVLEVAVDVATPEGVDAVVES   78 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC-----CceEEEEcCCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888888777765321     3688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+.       
T Consensus        79 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  151 (263)
T 3ai3_A           79 VRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-------  151 (263)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-------
Confidence            9999999999999999887778888999999999999999999999999999998778999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       152 --------~~~~~Y~~sK~a~~~~~~~  170 (263)
T 3ai3_A          152 --------WYEPIYNVTKAALMMFSKT  170 (263)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCcchHHHHHHHHHHHHHH
Confidence                    7888999999999999874

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=5.1e-33  Score=234.35  Aligned_cols=168  Identities=21%  Similarity=0.303  Sum_probs=149.2

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      ....+++||++|||||++|||+++|++|+++|++|++++++ .+.+++..+++.+.      +.++.++.+|++|.++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~   84 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL------GSDAIAIKADIRQVPEIV   84 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHH
Confidence            44557899999999999999999999999999999998765 55667777776652      247899999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc-cccCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM-HYVGFV  215 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~-~~~~~~  215 (249)
                      ++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.. +..+. 
T Consensus        85 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~-  161 (270)
T 3is3_A           85 KLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSV-  161 (270)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCC-
Confidence            999999999999999999999988888899999999999999999999999999999976  58999999987 44555 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|+|.
T Consensus       162 --------------~~~~~Y~asKaa~~~~~~~  180 (270)
T 3is3_A          162 --------------PKHSLYSGSKGAVDSFVRI  180 (270)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCchhHHHHHHHHHHHHH
Confidence                          7889999999999999874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-33  Score=235.31  Aligned_cols=166  Identities=23%  Similarity=0.307  Sum_probs=151.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   77 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK------GVEARSYVCDVTSEEAVIGTVDS   77 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------TSCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHH
Confidence            468899999999999999999999999999999999998888777776542      24688999999999999999999


Q ss_pred             HhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.+|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.      
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  151 (262)
T 1zem_A           78 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP------  151 (262)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC------
T ss_pred             HHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC------
Confidence            999999999999999987 5667888999999999999999999999999999998778999999999988877      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       152 ---------~~~~~Y~asK~a~~~~~~~  170 (262)
T 1zem_A          152 ---------PNMAAYGTSKGAIIALTET  170 (262)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCchHHHHHHHHHHHHHH
Confidence                     7888999999999999874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=6e-33  Score=230.52  Aligned_cols=170  Identities=24%  Similarity=0.265  Sum_probs=152.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccC--CCHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDL--LSLDSVV  136 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~v~  136 (249)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++.++.+|+  ++.++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~d~d~~~~~~~~   82 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ-----PQPLIIALNLENATAQQYR   82 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS-----CCCEEEECCTTTCCHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-----CCceEEEeccccCCHHHHH
Confidence            44578999999999999999999999999999999999999999998888876421     2456666666  9999999


Q ss_pred             HHHHHHhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      ++++++.+.+|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+. 
T Consensus        83 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-  161 (247)
T 3i1j_A           83 ELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR-  161 (247)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC-
Confidence            99999999999999999999985 4467888999999999999999999999999999999888999999999998887 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       162 --------------~~~~~Y~~sK~a~~~~~~~  180 (247)
T 3i1j_A          162 --------------ANWGAYGVSKFATEGLMQT  180 (247)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCcchhHHHHHHHHHHHHH
Confidence                          8889999999999999874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=5.4e-33  Score=235.08  Aligned_cols=169  Identities=24%  Similarity=0.353  Sum_probs=153.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ++.++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dv~~~~~v~~~   89 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA------GVEADGRTCDVRSVPEIEAL   89 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHH
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEECCCCCHHHHHHH
Confidence            344688999999999999999999999999999999999998888877777552      14688899999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchh--hhcCCCCeEEEEcCCccccCCCC
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPS--LIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~--m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.  |++++.|+||++||..+..+.  
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--  167 (277)
T 2rhc_B           90 VAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV--  167 (277)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC--
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC--
Confidence            9999999999999999999887777888999999999999999999999999999  988777999999999988876  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       168 -------------~~~~~Y~asK~a~~~~~~~  186 (277)
T 2rhc_B          168 -------------VHAAPYSASKHGVVGFTKA  186 (277)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCccHHHHHHHHHHHHHH
Confidence                         7889999999999999874

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=2.7e-33  Score=234.63  Aligned_cols=166  Identities=24%  Similarity=0.291  Sum_probs=150.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++ +++..+++.+...     .++.++.+|++|.+++++++++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~   76 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-----VKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-----SCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC-----CcEEEEECCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999999887 7777777655321     3678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.       
T Consensus        77 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  149 (260)
T 1x1t_A           77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-------  149 (260)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-------
Confidence            9999999999999999877777888999999999999999999999999999998778999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       150 --------~~~~~Y~~sK~a~~~~~~~  168 (260)
T 1x1t_A          150 --------ANKSAYVAAKHGVVGFTKV  168 (260)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCchHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=7e-33  Score=232.73  Aligned_cols=170  Identities=20%  Similarity=0.191  Sum_probs=155.3

Q ss_pred             CCCCCCCCEEEEeCCC-CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           59 PLPPVNDLTCIVTGST-SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        59 ~~~~~~~~~vlItGas-~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .+.++++|+++||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+..     ..++.++.+|++|.+++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~v~~   90 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-----LGRVEAVVCDVTSTEAVDA   90 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-----SSCEEEEECCTTCHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-----CCceEEEEeCCCCHHHHHH
Confidence            3456889999999998 599999999999999999999999999988888875531     2478999999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++++.++++++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||..+..+.  
T Consensus        91 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--  168 (266)
T 3o38_A           91 LITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ--  168 (266)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC--
T ss_pred             HHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC--
Confidence            999999999999999999999887888899999999999999999999999999999986 67899999999998887  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|++.
T Consensus       169 -------------~~~~~Y~~sKaa~~~~~~~  187 (266)
T 3o38_A          169 -------------HSQSHYAAAKAGVMALTRC  187 (266)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCchHHHHHHHHHHHHHH
Confidence                         8899999999999999874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.5e-33  Score=234.90  Aligned_cols=166  Identities=21%  Similarity=0.249  Sum_probs=147.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +.+++||+++||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+.      +.++.++.+|++|.++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~   76 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL------GRSALAIKADLTNAAEVEAA   76 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT------TSCCEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCceEEEEcCCCCHHHHHHH
Confidence            356889999999999999999999999999999998 56667777777666542      24688999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCC
Q 025705          139 SEAWNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVD  216 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~  216 (249)
                      ++++.+++|++|+||||||.. ...++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||.++. .+.  
T Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~--  152 (259)
T 3edm_A           77 ISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGG--  152 (259)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCS--
T ss_pred             HHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCC--
Confidence            999999999999999999977 5667889999999999999999999999999999977  5899999999887 555  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       153 -------------~~~~~Y~asKaa~~~l~~~  171 (259)
T 3edm_A          153 -------------PGALAYATSKGAVMTFTRG  171 (259)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCcHHHHHHHHHHHHHHHH
Confidence                         7889999999999999874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.7e-33  Score=234.02  Aligned_cols=163  Identities=22%  Similarity=0.325  Sum_probs=148.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..         ++.++.+|++|.+++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~D~~~~~~v~~~~~~   74 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---------AARYVHLDVTQPAQWKAAVDT   74 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---------GEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---------CceEEEecCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999998887766555432         478889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..++.+.       
T Consensus        75 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  147 (260)
T 1nff_A           75 AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-------  147 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-------
Confidence            9999999999999999887777888999999999999999999999999999998778999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       148 --------~~~~~Y~~sK~a~~~~~~~  166 (260)
T 1nff_A          148 --------VACHGYTATKFAVRGLTKS  166 (260)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------CCchhHHHHHHHHHHHHHH
Confidence                    7888999999999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=3.2e-33  Score=232.89  Aligned_cols=163  Identities=22%  Similarity=0.352  Sum_probs=147.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|++ +++++   ++.+.      +.++.++.+|++|.++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~------~~~~~~~~~Dv~~~~~v~~~~~   74 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL------GRRVLTVKCDVSQPGDVEAFGK   74 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT------TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc------CCcEEEEEeecCCHHHHHHHHH
Confidence            46789999999999999999999999999999999998 66654   23221      1468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..++.+.      
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  148 (249)
T 2ew8_A           75 QVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI------  148 (249)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC------
Confidence            99999999999999999887778888999999999999999999999999999998878999999999988876      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|++.
T Consensus       149 ---------~~~~~Y~asK~a~~~~~~~  167 (249)
T 2ew8_A          149 ---------EAYTHYISTKAANIGFTRA  167 (249)
T ss_dssp             ---------SSCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchhHHHHHHHHHHHHHH
Confidence                     7889999999999999874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=6.7e-33  Score=232.19  Aligned_cols=168  Identities=26%  Similarity=0.372  Sum_probs=151.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~   82 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE------GLSVTGTVCHVGKAEDRERLV   82 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHH
Confidence            45678999999999999999999999999999999999998888877777652      146888999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..++.+.    
T Consensus        83 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  158 (260)
T 2zat_A           83 AMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF----  158 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC----
Confidence            999999999999999999864 356788899999999999999999999999999998888999999999988776    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       159 -----------~~~~~Y~~sK~a~~~~~~~  177 (260)
T 2zat_A          159 -----------PNLGPYNVSKTALLGLTKN  177 (260)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchhHHHHHHHHHHHHHH
Confidence                       7889999999999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.9e-33  Score=232.86  Aligned_cols=163  Identities=25%  Similarity=0.286  Sum_probs=148.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH--HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA--ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|+++||||++|||+++|++|+++|++|++++|+.++  +++..+++.+.      +.++.++.+|++|.++++++++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA------DQKAVFVGLDVTDKANFDSAIDEA   75 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHH
Confidence            6899999999999999999999999999999999877  77766666541      246889999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcCCccccCCCCccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++. |+||++||..+..+.       
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  148 (258)
T 3a28_C           76 AEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF-------  148 (258)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC-------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC-------
Confidence            999999999999999887778888999999999999999999999999999998776 899999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       149 --------~~~~~Y~~sK~a~~~~~~~  167 (258)
T 3a28_C          149 --------PILSAYSTTKFAVRGLTQA  167 (258)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCchhHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.7e-33  Score=237.34  Aligned_cols=162  Identities=25%  Similarity=0.312  Sum_probs=144.7

Q ss_pred             CCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           56 NPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        56 ~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .+.+.++.+||++|||||++|||+++|++|+++|++|++++|+.+...                ..+..+.+|++|.+++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~~Dv~~~~~v   68 (269)
T 3vtz_A            5 HHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----------------NVSDHFKIDVTNEEEV   68 (269)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----------------TSSEEEECCTTCHHHH
T ss_pred             ccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----------------CceeEEEecCCCHHHH
Confidence            455667899999999999999999999999999999999999875430                2457789999999999


Q ss_pred             HHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..++.+. 
T Consensus        69 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-  147 (269)
T 3vtz_A           69 KEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT-  147 (269)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-
Confidence            9999999999999999999999988888889999999999999999999999999999998888999999999998887 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|+|.
T Consensus       148 --------------~~~~~Y~asKaa~~~l~~~  166 (269)
T 3vtz_A          148 --------------KNAAAYVTSKHALLGLTRS  166 (269)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCChhHHHHHHHHHHHHHH
Confidence                          8889999999999999874

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.3e-33  Score=235.10  Aligned_cols=168  Identities=28%  Similarity=0.358  Sum_probs=150.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ++.++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+    .   .++.++.+|++|+++++++
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~----~---~~~~~~~~Dv~d~~~v~~~   95 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA----Y---GDCQAIPADLSSEAGARRL   95 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT----S---SCEEECCCCTTSHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----c---CceEEEEeeCCCHHHHHHH
Confidence            44568899999999999999999999999999999999999888777666643    1   2678889999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC----CeEEEEcCCccccCC
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP----SRIINVNSVMHYVGF  214 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~----g~Iv~vsS~~~~~~~  214 (249)
                      ++++.+.++++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++.    |+||++||.+++.+.
T Consensus        96 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~  175 (276)
T 2b4q_A           96 AQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM  175 (276)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC
Confidence            9999999999999999999887778888999999999999999999999999999987665    899999999988776


Q ss_pred             CCccccccccccccCCCcc-cchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLM-GYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~-~Y~asKaal~~l~~~  248 (249)
                                     ++.. .|++||+|+++|+|.
T Consensus       176 ---------------~~~~~~Y~asK~a~~~~~~~  195 (276)
T 2b4q_A          176 ---------------GEQAYAYGPSKAALHQLSRM  195 (276)
T ss_dssp             ---------------CCSCTTHHHHHHHHHHHHHH
T ss_pred             ---------------CCCccccHHHHHHHHHHHHH
Confidence                           6667 899999999999874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=7.8e-33  Score=231.37  Aligned_cols=163  Identities=25%  Similarity=0.263  Sum_probs=149.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...      +.++.++.+|++|.++++++++++.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~~   75 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA------GGHAVAVKVDVSDRDQVFAAVEQARK   75 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999998888887777552      13688999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      .+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++ .|+||++||..+..+.         
T Consensus        76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  146 (256)
T 1geg_A           76 TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---------  146 (256)
T ss_dssp             HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC---------
Confidence            999999999999987777788899999999999999999999999999999876 7899999999988877         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|++||+|+++|+|.
T Consensus       147 ------~~~~~Y~asK~a~~~~~~~  165 (256)
T 1geg_A          147 ------PELAVYSSSKFAVRGLTQT  165 (256)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHH
T ss_pred             ------CCchhHHHHHHHHHHHHHH
Confidence                  7888999999999999874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=6.9e-33  Score=236.07  Aligned_cols=169  Identities=22%  Similarity=0.227  Sum_probs=149.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE-cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH-----
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD-----  133 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~-r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----  133 (249)
                      +.++++|+++||||++|||+++|++|+++|++|++++ |+.+++++..+++.+..     +.++.++.+|++|.+     
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~~~~~   78 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-----PNSAITVQADLSNVATAPVS   78 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-----TTCEEEEECCCSSSCBCCCC
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-----CCeeEEEEeecCCccccccc
Confidence            3467899999999999999999999999999999999 99988888888776321     146889999999999     


Q ss_pred             ------------HHHHHHHHHhccCCCccEEEeccccCCCCCCCCCC--------------HHHHHHHHHhhhhHHHHHH
Q 025705          134 ------------SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFS--------------KDGYEEHMQVNHLAPALLS  187 (249)
Q Consensus       134 ------------~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~--------------~~~~~~~~~vN~~~~~~l~  187 (249)
                                  +++++++++.+.+|++|+||||||+....++.+.+              .++|++++++|+.+++.++
T Consensus        79 ~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  158 (291)
T 1e7w_A           79 GADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  158 (291)
T ss_dssp             ----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHH
Confidence                        99999999999999999999999988777788888              9999999999999999999


Q ss_pred             HHhchhhhcCC------CCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          188 ILLFPSLIRGS------PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       188 ~~~l~~m~~~~------~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++++|+|++++      .|+||++||..+..+.               ++...|++||+|+++|++.
T Consensus       159 ~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~---------------~~~~~Y~asKaa~~~l~~~  210 (291)
T 1e7w_A          159 KAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL---------------LGYTIYTMAKGALEGLTRS  210 (291)
T ss_dssp             HHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC---------------CCCchhHHHHHHHHHHHHH
Confidence            99999999876      6999999999998877               8889999999999999874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-33  Score=232.11  Aligned_cols=162  Identities=26%  Similarity=0.314  Sum_probs=148.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.+++++++++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~   73 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG---------ERSMFVRHDVSSEADWTLVMAA   73 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---------TTEEEECCCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---------CceEEEEccCCCHHHHHHHHHH
Confidence            5788999999999999999999999999999999999888777665541         3688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++ |+||++||..++.+.       
T Consensus        74 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-------  145 (253)
T 1hxh_A           74 VQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI-------  145 (253)
T ss_dssp             HHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-------
Confidence            999999999999999988777788899999999999999999999999999999877 999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       146 --------~~~~~Y~~sK~a~~~~~~~  164 (253)
T 1hxh_A          146 --------EQYAGYSASKAAVSALTRA  164 (253)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------CCCccHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=5.6e-33  Score=229.16  Aligned_cols=164  Identities=24%  Similarity=0.306  Sum_probs=149.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~   75 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-----VEVFYHHLDVSKAESVEEFSKKVL   75 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTCHHHHHHHCC-HH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----CeEEEEEeccCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999998888875432     478999999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.+|++|+||||||+....++.+.+.+++++++++|+.+++.++++++|+|.+ +.|++|+++|..+..+.         
T Consensus        76 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~---------  145 (235)
T 3l77_A           76 ERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLI---------  145 (235)
T ss_dssp             HHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCC---------
T ss_pred             HhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccC---------
Confidence            99999999999999988888899999999999999999999999999999944 45899999999888776         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            +....|++||+|+++|++.
T Consensus       146 ------~~~~~Y~~sKaa~~~~~~~  164 (235)
T 3l77_A          146 ------PYGGGYVSTKWAARALVRT  164 (235)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------CCcchHHHHHHHHHHHHHH
Confidence                  7888999999999999874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=4.1e-33  Score=232.23  Aligned_cols=159  Identities=20%  Similarity=0.321  Sum_probs=144.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|+++++++++++.+.
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~   71 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---------DNLYIAQLDVRNRAAIEEMLASLPAE   71 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999999888777665542         26888999999999999999999999


Q ss_pred             CCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.++..+.          
T Consensus        72 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------  141 (248)
T 3asu_A           72 WCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY----------  141 (248)
T ss_dssp             TCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------
T ss_pred             CCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC----------
Confidence            999999999999863 467788999999999999999999999999999988778999999999988776          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++...|++||+|+++|++.
T Consensus       142 -----~~~~~Y~asKaa~~~~~~~  160 (248)
T 3asu_A          142 -----AGGNVYGATKAFVRQFSLN  160 (248)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHH
T ss_pred             -----CCCchHHHHHHHHHHHHHH
Confidence                 7889999999999999874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=6e-33  Score=233.97  Aligned_cols=169  Identities=21%  Similarity=0.269  Sum_probs=151.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+. +..++..+++.+.      +.++.++.+|++|.+++++
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~   96 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK------GYKAAVIKFDAASESDFIE   96 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCceEEEECCCCCHHHHHH
Confidence            34568899999999999999999999999999999999954 4455555555441      2478999999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++++.+.++++|+||||||+....++.+.+.+++++.+++|+.+++.+++.++|+|++++.|+||++||.++..+.   
T Consensus        97 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---  173 (271)
T 4iin_A           97 AIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN---  173 (271)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC---
Confidence            99999999999999999999988888889999999999999999999999999999999888999999999998887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       174 ------------~~~~~Y~asK~a~~~~~~~  192 (271)
T 4iin_A          174 ------------MGQTNYSASKGGMIAMSKS  192 (271)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCchHhHHHHHHHHHHHHH
Confidence                        8899999999999999874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=6.7e-33  Score=232.12  Aligned_cols=164  Identities=23%  Similarity=0.269  Sum_probs=149.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.++++++++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~   75 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG---------DAALAVAADISKEADVDAAVE   75 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC---------CceEEEEecCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999999988887766542         368899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC----CCeEEEEcCCccccCCC
Q 025705          141 AWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS----PSRIINVNSVMHYVGFV  215 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~----~g~Iv~vsS~~~~~~~~  215 (249)
                      ++.+.++++|+||||||+.. ..++.+.+.+++++++++|+.+++.++++++|+|++++    .|+||++||..+..+. 
T Consensus        76 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-  154 (261)
T 3n74_A           76 AALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR-  154 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC-
T ss_pred             HHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC-
Confidence            99999999999999999875 56778889999999999999999999999999998753    6789999999998887 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       155 --------------~~~~~Y~asKaa~~~~~~~  173 (261)
T 3n74_A          155 --------------PNLAWYNATKGWVVSVTKA  173 (261)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCccHHHHHHHHHHHHHHH
Confidence                          8889999999999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.6e-33  Score=230.99  Aligned_cols=159  Identities=19%  Similarity=0.245  Sum_probs=145.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ||+++||||++|||+++|++|+++|  ++|++++|+.+++++..+++.         .++.++.+|++|.++++++++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~   72 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG---------DRFFYVVGDITEDSVLKQLVNAA   72 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG---------GGEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC---------CceEEEECCCCCHHHHHHHHHHH
Confidence            6899999999999999999999985  789999999988877766542         37889999999999999999999


Q ss_pred             hccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          143 NGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       143 ~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++++ |+||++||..+..+.       
T Consensus        73 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~-------  144 (254)
T 3kzv_A           73 VKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYF-------  144 (254)
T ss_dssp             HHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSS-------
T ss_pred             HHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCC-------
Confidence            999999999999999864 36788999999999999999999999999999998866 999999999998887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       145 --------~~~~~Y~asK~a~~~~~~~  163 (254)
T 3kzv_A          145 --------SSWGAYGSSKAALNHFAMT  163 (254)
T ss_dssp             --------CCSHHHHHHHHHHHHHHHH
T ss_pred             --------CCcchHHHHHHHHHHHHHH
Confidence                    8899999999999999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.9e-33  Score=242.84  Aligned_cols=174  Identities=25%  Similarity=0.209  Sum_probs=153.4

Q ss_pred             hcCCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC----------hHHHHHHHHHHHHhhcCCCCCCceE
Q 025705           54 LQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN----------LKAANELIQKWQEEWSGKGLPLNIE  123 (249)
Q Consensus        54 ~~~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~----------~~~~~~~~~~~~~~~~~~~~~~~v~  123 (249)
                      ...|..+.+++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++.+.      +.++.
T Consensus        16 ~~~p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~   89 (322)
T 3qlj_A           16 TQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA------GGEAV   89 (322)
T ss_dssp             ------CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT------TCEEE
T ss_pred             ccCCchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc------CCcEE
Confidence            344556778899999999999999999999999999999999998          67777777777652      24788


Q ss_pred             EEEccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-----
Q 025705          124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-----  198 (249)
Q Consensus       124 ~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-----  198 (249)
                      ++.+|++|.++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++.+     
T Consensus        90 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~  169 (322)
T 3qlj_A           90 ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKA  169 (322)
T ss_dssp             EECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCC
Confidence            999999999999999999999999999999999998888889999999999999999999999999999998532     


Q ss_pred             -CCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          199 -PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       199 -~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       .|+||++||..+..+.               ++...|++||+|+++|+|.
T Consensus       170 ~~g~IV~isS~~~~~~~---------------~~~~~Y~asKaal~~l~~~  205 (322)
T 3qlj_A          170 VDGRIINTSSGAGLQGS---------------VGQGNYSAAKAGIATLTLV  205 (322)
T ss_dssp             CCEEEEEECCHHHHHCB---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCHHHccCC---------------CCCccHHHHHHHHHHHHHH
Confidence             3799999999999887               8889999999999999874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.1e-32  Score=230.81  Aligned_cols=169  Identities=20%  Similarity=0.221  Sum_probs=150.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHH---cCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAE---SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~---~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .++++|+++||||++|||+++|++|++   +|++|++++|+.+++++..+++.+..+    +.++.++.+|++|++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dv~~~~~v~~   77 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP----DLKVVLAAADLGTEAGVQR   77 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT----TSEEEEEECCTTSHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC----CCeEEEEecCCCCHHHHHH
Confidence            357889999999999999999999999   899999999999998888888765321    1478899999999999999


Q ss_pred             HHHHHhc--cCCCcc--EEEeccccCCC--CCCCC-CCHHHHHHHHHhhhhHHHHHHHHhchhhhcC--CCCeEEEEcCC
Q 025705          138 FSEAWNG--RLGPLH--VLINNAGIFSI--GEPQK-FSKDGYEEHMQVNHLAPALLSILLFPSLIRG--SPSRIINVNSV  208 (249)
Q Consensus       138 ~~~~~~~--~~g~id--~linnag~~~~--~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~--~~g~Iv~vsS~  208 (249)
                      +++++.+  .+|++|  +||||||+...  .++.+ .+.++|++++++|+.+++.++++++|+|+++  +.|+||++||.
T Consensus        78 ~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
T 1oaa_A           78 LLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSL  157 (259)
T ss_dssp             HHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCG
T ss_pred             HHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCc
Confidence            9999988  678899  99999998643  45667 6899999999999999999999999999887  67999999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +++.+.               ++...|++||+|+++|+|.
T Consensus       158 ~~~~~~---------------~~~~~Y~asKaa~~~~~~~  182 (259)
T 1oaa_A          158 CALQPY---------------KGWGLYCAGKAARDMLYQV  182 (259)
T ss_dssp             GGTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             hhcCCC---------------CCccHHHHHHHHHHHHHHH
Confidence            998877               8889999999999999874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=9.2e-33  Score=230.27  Aligned_cols=164  Identities=23%  Similarity=0.276  Sum_probs=140.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++++
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD------GGTAISVAVDVSDPESAKAMAD   78 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEEEEECCTTSHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999999999998888888662      2478899999999999999999


Q ss_pred             HHhccCCCccEEEeccccC---CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          141 AWNGRLGPLHVLINNAGIF---SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~---~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++.+.++++|+||||||+.   ...++.+.+.+++++++++|+.+++.++++++|.|++++.|+||++||..++      
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------  152 (253)
T 3qiv_A           79 RTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW------  152 (253)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc------
Confidence            9999999999999999983   3456778899999999999999999999999999999888999999999876      


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       153 ------------~~~~~Y~asK~a~~~~~~~  171 (253)
T 3qiv_A          153 ------------LYSNYYGLAKVGINGLTQQ  171 (253)
T ss_dssp             -------------------CCHHHHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHH
Confidence                        3456699999999999874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=2.1e-33  Score=235.86  Aligned_cols=167  Identities=13%  Similarity=0.182  Sum_probs=143.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC---hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN---LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+   .+.+++..+++.+.      +.++.++.+|++|.+++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v   78 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ------GAKVALYQSDLSNEEEV   78 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT------TCEEEEEECCCCSHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHH
Confidence            3467899999999999999999999999999999998764   44566666665542      25789999999999999


Q ss_pred             HHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||.++..+. 
T Consensus        79 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~-  155 (262)
T 3ksu_A           79 AKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYT-  155 (262)
T ss_dssp             HHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHH-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCC-
Confidence            9999999999999999999999988888899999999999999999999999999999943  5899999999988877 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|+|.
T Consensus       156 --------------~~~~~Y~asKaa~~~l~~~  174 (262)
T 3ksu_A          156 --------------GFYSTYAGNKAPVEHYTRA  174 (262)
T ss_dssp             --------------CCCCC-----CHHHHHHHH
T ss_pred             --------------CCCchhHHHHHHHHHHHHH
Confidence                          7888999999999999874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.1e-32  Score=230.98  Aligned_cols=167  Identities=16%  Similarity=0.192  Sum_probs=151.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++......    .++.++.+|++|++++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~   79 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSG----AQVDIVAGDIREPGDIDRLFEK   79 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT----CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC----CeEEEEEccCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888887777642111    2688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+| +|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..++.+.       
T Consensus        80 ~~~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  151 (260)
T 2z1n_A           80 ARDLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW-------  151 (260)
T ss_dssp             HHHTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-------
Confidence            999998 999999999877777888999999999999999999999999999998888999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       152 --------~~~~~Y~~sK~a~~~~~~~  170 (260)
T 2z1n_A          152 --------QDLALSNIMRLPVIGVVRT  170 (260)
T ss_dssp             --------TTBHHHHHHTHHHHHHHHH
T ss_pred             --------CCCchhHHHHHHHHHHHHH
Confidence                    7889999999999999874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-32  Score=230.20  Aligned_cols=160  Identities=29%  Similarity=0.328  Sum_probs=145.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++ ++..+++.          + .++.+|++|.+++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----------~-~~~~~D~~~~~~~~~~~~~   70 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----------G-AFFQVDLEDERERVRFVEE   70 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----------C-EEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----------C-CEEEeeCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999999876 55444331          3 6788999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.       
T Consensus        71 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  143 (256)
T 2d1y_A           71 AAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-------  143 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-------
Confidence            9999999999999999887777888999999999999999999999999999998888999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       144 --------~~~~~Y~~sK~a~~~~~~~  162 (256)
T 2d1y_A          144 --------QENAAYNASKGGLVNLTRS  162 (256)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------CCChhHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.5e-33  Score=233.52  Aligned_cols=168  Identities=21%  Similarity=0.279  Sum_probs=148.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE-cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~-r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ...+.+|+++||||++|||+++|++|+++|++|++++ ++.+..++..+++..      .+.++.++.+|++|.++++++
T Consensus        20 ~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~v~~~   93 (269)
T 3gk3_A           20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD------AGRDFKAYAVDVADFESCERC   93 (269)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT------TTCCCEEEECCTTCHHHHHHH
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh------cCCceEEEEecCCCHHHHHHH
Confidence            3346789999999999999999999999999999998 555555555555443      124789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+.+|++|+||||||+....++.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||.++..+.    
T Consensus        94 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----  169 (269)
T 3gk3_A           94 AEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA----  169 (269)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC----
Confidence            9999999999999999999988788889999999999999999999999999999998888999999999998887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       170 -----------~~~~~Y~asKaa~~~~~~~  188 (269)
T 3gk3_A          170 -----------FGQANYASAKAGIHGFTKT  188 (269)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcchHHHHHHHHHHHHHH
Confidence                       8899999999999999874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.1e-32  Score=230.26  Aligned_cols=163  Identities=27%  Similarity=0.337  Sum_probs=146.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+  ++..+++.+.      +.++.++.+|++|.++++++++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~------~~~~~~~~~D~~~~~~v~~~~~~~   73 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH------GVKAVHHPADLSDVAQIEALFALA   73 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT------SCCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc------CCceEEEeCCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999999876  4444454431      246888999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||.+++.+.        
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  145 (255)
T 2q2v_A           74 EREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS--------  145 (255)
T ss_dssp             HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC--------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC--------
Confidence            999999999999999887777888999999999999999999999999999998888999999999988876        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|++||+|+++|+|.
T Consensus       146 -------~~~~~Y~~sK~a~~~~~~~  164 (255)
T 2q2v_A          146 -------TGKAAYVAAKHGVVGLTKV  164 (255)
T ss_dssp             -------TTBHHHHHHHHHHHHHHHH
T ss_pred             -------CCchhHHHHHHHHHHHHHH
Confidence                   7889999999999999874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.7e-33  Score=233.05  Aligned_cols=164  Identities=24%  Similarity=0.228  Sum_probs=145.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++|++|||||++|||+++|++|+++|++|++. .|+.+.+++..+++...      +.++.++.+|++|.++++++++
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~   97 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA------GGKALTAQADVSDPAAVRRLFA   97 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCeEEEEEcCCCCHHHHHHHHH
Confidence            3578999999999999999999999999999987 45666677777666552      2478899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++  .|+||++||..+..+.      
T Consensus        98 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~------  169 (267)
T 3u5t_A           98 TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLH------  169 (267)
T ss_dssp             HHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCC------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCC------
Confidence            99999999999999999988888899999999999999999999999999999976  4899999999988877      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       170 ---------~~~~~Y~asKaa~~~l~~~  188 (267)
T 3u5t_A          170 ---------PSYGIYAAAKAGVEAMTHV  188 (267)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchHHHHHHHHHHHHHHH
Confidence                     8889999999999999874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.8e-33  Score=233.03  Aligned_cols=165  Identities=24%  Similarity=0.305  Sum_probs=147.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++ |+++||||++|||+++|++|+++|++|++++|+.+++++..+++...       .++.++.+|++|.++++++++
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~   89 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-------TRVLPLTLDVRDRAAMSAAVD   89 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-------SCEEEEECCTTCHHHHHHHHH
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-------CcEEEEEcCCCCHHHHHHHHH
Confidence            4566 99999999999999999999999999999999998887776665431       368899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCC-eEEEEcCCccccCCCCcc
Q 025705          141 AWNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPS-RIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g-~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++.+.+|++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|.|++++.| +||++||..+..+.    
T Consensus        90 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~----  165 (272)
T 2nwq_A           90 NLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY----  165 (272)
T ss_dssp             TCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC----
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC----
Confidence            999999999999999998753 678889999999999999999999999999999987778 99999999988776    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       166 -----------~~~~~Y~asKaa~~~l~~~  184 (272)
T 2nwq_A          166 -----------PGSHVYGGTKAFVEQFSLN  184 (272)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCchHHHHHHHHHHHHHH
Confidence                       7889999999999999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-32  Score=233.16  Aligned_cols=172  Identities=22%  Similarity=0.234  Sum_probs=149.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ++.++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...   ...++.++.+|++|.++++++
T Consensus        20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~~Dv~d~~~v~~~   96 (297)
T 1xhl_A           20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV---PAEKINAVVADVTEASGQDDI   96 (297)
T ss_dssp             ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEECCTTSHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---CCceEEEEecCCCCHHHHHHH
Confidence            34467899999999999999999999999999999999999988888877765210   011688999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCC--CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGE--PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++.+.+|++|+||||||+....+  +.+.+.++|++++++|+.+++.++++++|.|++++ |+||++||.++..+.. 
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~-  174 (297)
T 1xhl_A           97 INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH-  174 (297)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC-
T ss_pred             HHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC-
Confidence            9999999999999999999876666  78899999999999999999999999999999876 9999999998776531 


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       175 -------------~~~~~Y~asKaa~~~l~~~  193 (297)
T 1xhl_A          175 -------------SGYPYYACAKAALDQYTRC  193 (297)
T ss_dssp             -------------TTSHHHHHHHHHHHHHHHH
T ss_pred             -------------CCcchHHHHHHHHHHHHHH
Confidence                         5678899999999999874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.7e-32  Score=230.17  Aligned_cols=165  Identities=25%  Similarity=0.311  Sum_probs=148.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.+++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~d~~~v~~~~   77 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---------NGGFAVEVDVTKRASVDAAM   77 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---------TCCEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---------cCCeEEEEeCCCHHHHHHHH
Confidence            345789999999999999999999999999999999999877765544332         15678899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..+.    
T Consensus        78 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  153 (263)
T 3ak4_A           78 QKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA----  153 (263)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC----
Confidence            99999999999999999988777788899999999999999999999999999999876 7999999999988776    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       154 -----------~~~~~Y~~sK~a~~~~~~~  172 (263)
T 3ak4_A          154 -----------PLLAHYSASKFAVFGWTQA  172 (263)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchhHHHHHHHHHHHHHH
Confidence                       7888999999999999874

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-32  Score=229.94  Aligned_cols=165  Identities=26%  Similarity=0.305  Sum_probs=147.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+++||++|||||++|||+++|++|+++|++|++++++. +.+++..+++.+.      +.++.++.+|++|.+++++++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~Dv~d~~~v~~~~  100 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA------GGRAVAIRADNRDAEAIEQAI  100 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHH
Confidence            468899999999999999999999999999999987654 5667777666552      247889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC-CCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG-FVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~-~~~~~  218 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+ .    
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~----  174 (271)
T 3v2g_A          101 RETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPW----  174 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCS----
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCC----
Confidence            999999999999999999988888899999999999999999999999999999965  589999999877654 3    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       175 -----------~~~~~Y~asKaa~~~l~~~  193 (271)
T 3v2g_A          175 -----------PGISLYSASKAALAGLTKG  193 (271)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHH
Confidence                       7889999999999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.4e-32  Score=232.47  Aligned_cols=169  Identities=22%  Similarity=0.289  Sum_probs=145.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC------------hHHHHHHHHHHHHhhcCCCCCCceEEEE
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN------------LKAANELIQKWQEEWSGKGLPLNIEAME  126 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~  126 (249)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...      +.++.++.
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~   80 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI------GSRIVARQ   80 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH------TCCEEEEE
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc------CCeEEEEe
Confidence            3456899999999999999999999999999999999987            66777776666553      14789999


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEE
Q 025705          127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINV  205 (249)
Q Consensus       127 ~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~v  205 (249)
                      +|++|+++++++++++.+.+|++|+||||||+.....    +.++|++++++|+.++++++++++|+|++++ .|+||++
T Consensus        81 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~i  156 (278)
T 3sx2_A           81 ADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLI  156 (278)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            9999999999999999999999999999999864332    5899999999999999999999999998864 6899999


Q ss_pred             cCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          206 NSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       206 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ||.++..+..           ...++...|++||+|+++|+|.
T Consensus       157 sS~~~~~~~~-----------~~~~~~~~Y~asKaa~~~~~~~  188 (278)
T 3sx2_A          157 SSSAGLAGVG-----------SADPGSVGYVAAKHGVVGLMRV  188 (278)
T ss_dssp             CCGGGTSCCC-----------CSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHhcCCCc-----------cCCCCchHhHHHHHHHHHHHHH
Confidence            9999887641           1225677899999999999874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-32  Score=227.41  Aligned_cols=160  Identities=23%  Similarity=0.256  Sum_probs=144.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++           .+.++.+|++|.+++++++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~   70 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----------GAHPVVMDVADPASVERGFAE   70 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----------TCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----------CCEEEEecCCCHHHHHHHHHH
Confidence            367899999999999999999999999999999999987766554321           267889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||.. ..+.       
T Consensus        71 ~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~-------  142 (245)
T 1uls_A           71 ALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGN-------  142 (245)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCC-------
Confidence            99999999999999998877788889999999999999999999999999999988889999999988 7666       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       143 --------~~~~~Y~asK~a~~~~~~~  161 (245)
T 1uls_A          143 --------LGQANYAASMAGVVGLTRT  161 (245)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCchhHHHHHHHHHHHHHH
Confidence                    7888999999999999874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.8e-32  Score=233.07  Aligned_cols=170  Identities=24%  Similarity=0.241  Sum_probs=144.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCC----HH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLS----LD  133 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~  133 (249)
                      +..++++|+++||||++|||+++|++|+++|++|++++|+. +++++..+++.+..     +.++.++.+|++|    .+
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~~~~~~~~   91 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-----SNTAVVCQADLTNSNVLPA   91 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-----TTCEEEEECCCSCSTTHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-----CCceEEEEeecCCccCCHH
Confidence            44568899999999999999999999999999999999998 88888877775321     1468899999999    99


Q ss_pred             HHHHHHHHHhccCCCccEEEeccccCCCCCC-----CC-----CCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-----
Q 025705          134 SVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-----QK-----FSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-----  198 (249)
Q Consensus       134 ~v~~~~~~~~~~~g~id~linnag~~~~~~~-----~~-----~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-----  198 (249)
                      +++++++++.+.+|++|+||||||+....++     .+     .+.++|++++++|+.+++.++++++|.|++++     
T Consensus        92 ~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  171 (288)
T 2x9g_A           92 SCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTS  171 (288)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------C
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCC
Confidence            9999999999999999999999998766666     56     78899999999999999999999999998876     


Q ss_pred             -CCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          199 -PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       199 -~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       .|+||++||..+..+.               ++...|++||+|+++|++.
T Consensus       172 ~~g~iv~isS~~~~~~~---------------~~~~~Y~asKaa~~~l~~~  207 (288)
T 2x9g_A          172 SNLSIVNLCDAMVDQPC---------------MAFSLYNMGKHALVGLTQS  207 (288)
T ss_dssp             CCEEEEEECCTTTTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEecccccCCC---------------CCCchHHHHHHHHHHHHHH
Confidence             7899999999988876               8889999999999999874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.7e-32  Score=232.75  Aligned_cols=166  Identities=23%  Similarity=0.269  Sum_probs=146.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.  +..++..+++.+.      +.++.++.+|++|.+++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~  117 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC------GRKAVLLPGDLSDESFARS  117 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT------TCCEEECCCCTTSHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc------CCcEEEEEecCCCHHHHHH
Confidence            4567899999999999999999999999999999999873  3445554444431      2478899999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++++.+.+|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|.+  .|+||++||..++.+.  
T Consensus       118 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~--  193 (294)
T 3r3s_A          118 LVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPS--  193 (294)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCC--
T ss_pred             HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCC--
Confidence            99999999999999999999864 456788999999999999999999999999999965  4899999999999887  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       194 -------------~~~~~Y~asKaa~~~l~~~  212 (294)
T 3r3s_A          194 -------------PHLLDYAATKAAILNYSRG  212 (294)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCchHHHHHHHHHHHHHHH
Confidence                         8889999999999999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=4.4e-32  Score=231.66  Aligned_cols=166  Identities=11%  Similarity=0.057  Sum_probs=145.9

Q ss_pred             CCCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +..+++||++|||||++  |||+++|++|+++|++|++++|+.+..+...+ +.+..      ..+.++.+|++|.++++
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~------~~~~~~~~Dv~d~~~v~   96 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDP-LAESL------GVKLTVPCDVSDAESVD   96 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHHH------TCCEEEECCTTCHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-HHHhc------CCeEEEEcCCCCHHHHH
Confidence            34568899999999997  99999999999999999999999765444433 33322      24678999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV  212 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~  212 (249)
                      ++++++.+++|++|+||||||+...    .++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..
T Consensus        97 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~  174 (296)
T 3k31_A           97 NMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEK  174 (296)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTS
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhcc
Confidence            9999999999999999999998764    67888999999999999999999999999999976  58999999999988


Q ss_pred             CCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          213 GFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +.               ++...|++||+|+++|+|.
T Consensus       175 ~~---------------~~~~~Y~asKaal~~l~~~  195 (296)
T 3k31_A          175 VV---------------PHYNVMGVCKAALEASVKY  195 (296)
T ss_dssp             CC---------------TTTTHHHHHHHHHHHHHHH
T ss_pred             CC---------------CCchhhHHHHHHHHHHHHH
Confidence            87               8889999999999999874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-32  Score=230.49  Aligned_cols=169  Identities=23%  Similarity=0.261  Sum_probs=148.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...   ...++.++.+|++|.+++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~   79 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV---SEKQVNSVVADVTTEDGQDQIINS   79 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC---CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCcceEEEEecCCCHHHHHHHHHH
Confidence            57889999999999999999999999999999999999888887777654210   012688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCC----CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGE----PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +.+.+|++|+||||||+....+    +.+.+.++|++++++|+.+++.++++++|+|++++ |+||++||..+..+..  
T Consensus        80 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~--  156 (280)
T 1xkq_A           80 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ--  156 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC--
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCC--
Confidence            9999999999999999876666    77889999999999999999999999999998766 9999999998776531  


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       157 ------------~~~~~Y~asK~a~~~~~~~  175 (280)
T 1xkq_A          157 ------------PDFLYYAIAKAALDQYTRS  175 (280)
T ss_dssp             ------------CSSHHHHHHHHHHHHHHHH
T ss_pred             ------------CcccHHHHHHHHHHHHHHH
Confidence                        5678899999999999874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-32  Score=236.51  Aligned_cols=166  Identities=25%  Similarity=0.351  Sum_probs=145.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-----hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-----LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      +++|+++||||++|||+++|++|+++|++|++++|+     .+++++..+.+...      +.++.++.+|++|.+++++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~------~~~~~~~~~Dvtd~~~v~~   76 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN------DVDLRTLELDVQSQVSVDR   76 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH------TCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc------CCcEEEEEeecCCHHHHHH
Confidence            568999999999999999999999999999988776     44555555444432      1478999999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++++.+++|++|+||||||+...+++.+.+.+++++++++|+.|++.++++++|+|++++.|+||++||.++..+..  
T Consensus        77 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~--  154 (324)
T 3u9l_A           77 AIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP--  154 (324)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC--
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC--
Confidence            999999999999999999999888889999999999999999999999999999999998889999999998875531  


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       155 ------------~~~~~Y~asKaa~~~~~~~  173 (324)
T 3u9l_A          155 ------------PYLAPYFAAKAAMDAIAVQ  173 (324)
T ss_dssp             ------------SSCHHHHHHHHHHHHHHHH
T ss_pred             ------------CcchhHHHHHHHHHHHHHH
Confidence                        6678899999999999874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-32  Score=231.57  Aligned_cols=168  Identities=24%  Similarity=0.283  Sum_probs=141.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.....   .+.++.++.+|++|.+++++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~   79 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV---SEQNVNSVVADVTTDAGQDEILST   79 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc---CCCceeEEecccCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888887777643111   124688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCC----CHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcc-ccCCCC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKF----SKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMH-YVGFVD  216 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~----~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~-~~~~~~  216 (249)
                      +.+.+|++|+||||||.....++.+.    +.++|++++++|+.+++.++++++|.|++++ |+||++||..+ ..+.  
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~--  156 (278)
T 1spx_A           80 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT--  156 (278)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC--
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC--
Confidence            99999999999999998766677777    9999999999999999999999999998766 99999999988 7666  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|++.
T Consensus       157 -------------~~~~~Y~~sK~a~~~~~~~  175 (278)
T 1spx_A          157 -------------PDFPYYSIAKAAIDQYTRN  175 (278)
T ss_dssp             -------------TTSHHHHHHHHHHHHHHHH
T ss_pred             -------------CCccHHHHHHHHHHHHHHH
Confidence                         7888999999999999874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=4e-32  Score=231.37  Aligned_cols=167  Identities=21%  Similarity=0.292  Sum_probs=146.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+...+...+..+.     .+.++.++.+|++|.+++++++
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~  116 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-----EGVKCVLLPGDLSDEQHCKDIV  116 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-----TTCCEEEEESCTTSHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHH
Confidence            34678999999999999999999999999999999999977544433333332     1247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..++.+.    
T Consensus       117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~----  190 (291)
T 3ijr_A          117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGN----  190 (291)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCC----
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCC----
Confidence            999999999999999999864 356788899999999999999999999999999965  4799999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       191 -----------~~~~~Y~asKaa~~~l~~~  209 (291)
T 3ijr_A          191 -----------ETLIDYSATKGAIVAFTRS  209 (291)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCChhHHHHHHHHHHHHHH
Confidence                       8889999999999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.6e-32  Score=230.41  Aligned_cols=167  Identities=20%  Similarity=0.173  Sum_probs=142.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH----HHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL----DSV  135 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~----~~v  135 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.+++++..+++.+...     .++.++.+|++|.    +++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~   81 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-----GSAVLCKGDLSLSSSLLDCC   81 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-----TCEEEEECCCSSSTTHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-----CceEEEeccCCCccccHHHH
Confidence            3467899999999999999999999999999999999 88888888777765311     3688999999999    999


Q ss_pred             HHHHHHHhccCCCccEEEeccccCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHhchhhhcCCC-----
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSK-----------DGYEEHMQVNHLAPALLSILLFPSLIRGSP-----  199 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-----  199 (249)
                      +++++++.+.+|++|+||||||+....++.+.+.           ++|++++++|+.+++.++++++|+|+ ++.     
T Consensus        82 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~  160 (276)
T 1mxh_A           82 EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSR  160 (276)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCC
Confidence            9999999999999999999999887777778888           99999999999999999999999998 555     


Q ss_pred             -CeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          200 -SRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       200 -g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       |+||++||..++.+.               ++...|++||+|+++|++.
T Consensus       161 ~g~iv~isS~~~~~~~---------------~~~~~Y~asK~a~~~l~~~  195 (276)
T 1mxh_A          161 NLSVVNLCDAMTDLPL---------------PGFCVYTMAKHALGGLTRA  195 (276)
T ss_dssp             CEEEEEECCGGGGSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECchhhcCCC---------------CCCeehHHHHHHHHHHHHH
Confidence             899999999998877               7889999999999999874

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2e-32  Score=232.11  Aligned_cols=162  Identities=21%  Similarity=0.250  Sum_probs=142.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++         +.++.++.+|++|.+++++++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~   72 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---------GGNAVGVVGDVRSLQDQKRAAER   72 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---------BTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            467999999999999999999999999999999999988876655442         14788999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCC-CC----CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          142 WNGRLGPLHVLINNAGIFSIG-EP----QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~-~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +.+.+|++|+||||||+.... ++    .+.+.++|++++++|+.+++.++++++|+|++++ |+||++||..+..+.  
T Consensus        73 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~--  149 (281)
T 3zv4_A           73 CLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPN--  149 (281)
T ss_dssp             HHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSS--
T ss_pred             HHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCC--
Confidence            999999999999999986432 22    2445678999999999999999999999998764 899999999998887  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|+|.
T Consensus       150 -------------~~~~~Y~asKaa~~~l~~~  168 (281)
T 3zv4_A          150 -------------GGGPLYTATKHAVVGLVRQ  168 (281)
T ss_dssp             -------------SSCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCchhHHHHHHHHHHHHH
Confidence                         8889999999999999874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.2e-32  Score=229.71  Aligned_cols=170  Identities=16%  Similarity=0.210  Sum_probs=151.7

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHH-HHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           61 PPVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAA-NELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        61 ~~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.+...     .++.++.+|++|.+++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~v~~   90 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG-----IKAKAYKCQVDSYESCEK   90 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHC-----CCEECCBCCTTCHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcC-----CceeEEecCCCCHHHHHH
Confidence            35789999999999  9999999999999999999999887654 666777765432     478899999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++++.+.++++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+... 
T Consensus        91 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  169 (267)
T 3gdg_A           91 LVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP-  169 (267)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS-
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC-
Confidence            9999999999999999999998878888999999999999999999999999999999988899999999988876421 


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       170 ------------~~~~~Y~~sK~a~~~~~~~  188 (267)
T 3gdg_A          170 ------------QEQTSYNVAKAGCIHMARS  188 (267)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCcchHHHHHHHHHHHH
Confidence                        4678899999999999874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-32  Score=229.33  Aligned_cols=171  Identities=22%  Similarity=0.303  Sum_probs=153.3

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +.+..++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.      +.++.++.+|++|.++++
T Consensus        23 ~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~v~   96 (272)
T 1yb1_A           23 PKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL------GAKVHTFVVDCSNREDIY   96 (272)
T ss_dssp             --CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHH
T ss_pred             CCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc------CCeEEEEEeeCCCHHHHH
Confidence            44556789999999999999999999999999999999999998888887777652      246889999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++++.+.++++|+||||||+....++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..++.+.  
T Consensus        97 ~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--  174 (272)
T 1yb1_A           97 SSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV--  174 (272)
T ss_dssp             HHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH--
T ss_pred             HHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC--
Confidence            999999999999999999999887777888889999999999999999999999999998888999999999988776  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|++.
T Consensus       175 -------------~~~~~Y~~sK~a~~~l~~~  193 (272)
T 1yb1_A          175 -------------PFLLAYCSSKFAAVGFHKT  193 (272)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHH
T ss_pred             -------------CCchhHHHHHHHHHHHHHH
Confidence                         7788999999999999874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.4e-32  Score=232.58  Aligned_cols=162  Identities=25%  Similarity=0.413  Sum_probs=148.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++         ..++.++.+|++|.++++++++++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~~~~~~~~~   73 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---------PDRAEAISLDVTDGERIDVVAADV   73 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---------TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---------cCCceEEEeeCCCHHHHHHHHHHH
Confidence            46799999999999999999999999999999999988877665432         136889999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.+|++|+||||||.....++.+.+.+++++++++|+.+++.++++++|.|++++.|+||++||..+..+.        
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  145 (281)
T 3m1a_A           74 LARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSF--------  145 (281)
T ss_dssp             HHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC--------
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCC--------
Confidence            999999999999999987788889999999999999999999999999999998888999999999998887        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|++||+|+++|++.
T Consensus       146 -------~~~~~Y~~sK~a~~~~~~~  164 (281)
T 3m1a_A          146 -------AGFSAYSATKAALEQLSEG  164 (281)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------CCchHHHHHHHHHHHHHHH
Confidence                   8889999999999999874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-33  Score=232.26  Aligned_cols=160  Identities=23%  Similarity=0.252  Sum_probs=141.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.+++++++++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~   73 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---------AEAIAVVADVSDPKAVEAVFAE   73 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC---------SSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------CceEEEEcCCCCHHHHHHHHHH
Confidence            5788999999999999999999999999999999999887766544331         3688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+| ++ .|+||++||..++ +.       
T Consensus        74 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~-------  143 (263)
T 2a4k_A           74 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GA-------  143 (263)
T ss_dssp             HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CH-------
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CC-------
Confidence            99999999999999999877788889999999999999999999999999999 54 7899999999988 65       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       144 --------~~~~~Y~asK~a~~~~~~~  162 (263)
T 2a4k_A          144 --------FGLAHYAAGKLGVVGLART  162 (263)
T ss_dssp             --------HHHHHHHHCSSHHHHHHHH
T ss_pred             --------CCcHHHHHHHHHHHHHHHH
Confidence                    6788999999999999874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-32  Score=234.44  Aligned_cols=169  Identities=22%  Similarity=0.227  Sum_probs=149.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE-cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH-----
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD-----  133 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~-r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----  133 (249)
                      +.++++|++|||||++|||+++|++|+++|++|++++ |+.+++++..+++....     +.++.++.+|++|.+     
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~d~~~~~~~  115 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-----PNSAITVQADLSNVATAPVS  115 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-----TTCEEEEECCCSSSCBCC--
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-----CCeEEEEEeeCCCchhcccc
Confidence            3447899999999999999999999999999999999 99988888887776322     146889999999999     


Q ss_pred             ------------HHHHHHHHHhccCCCccEEEeccccCCCCCCCCCC--------------HHHHHHHHHhhhhHHHHHH
Q 025705          134 ------------SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFS--------------KDGYEEHMQVNHLAPALLS  187 (249)
Q Consensus       134 ------------~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~--------------~~~~~~~~~vN~~~~~~l~  187 (249)
                                  +++++++++.+.+|++|+||||||+....++.+.+              .++|++++++|+.+++.++
T Consensus       116 ~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~  195 (328)
T 2qhx_A          116 GADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  195 (328)
T ss_dssp             -----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence                        99999999999999999999999988777777888              8999999999999999999


Q ss_pred             HHhchhhhcCC------CCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          188 ILLFPSLIRGS------PSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       188 ~~~l~~m~~~~------~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++++|.|.+++      .|+||++||..+..+.               ++...|++||+|+++|++.
T Consensus       196 ~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~---------------~~~~~Y~asKaal~~l~~~  247 (328)
T 2qhx_A          196 KAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL---------------LGYTIYTMAKGALEGLTRS  247 (328)
T ss_dssp             HHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCcCCCCCcEEEEECchhhccCC---------------CCcHHHHHHHHHHHHHHHH
Confidence            99999998876      7999999999988877               8889999999999999874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=9.7e-33  Score=232.33  Aligned_cols=157  Identities=24%  Similarity=0.262  Sum_probs=141.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.+.++                 ....+.+|++|.+++++++
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------------~~~~~~~Dv~~~~~~~~~~   85 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------------ADLHLPGDLREAAYADGLP   85 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------------CSEECCCCTTSHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------------hhhccCcCCCCHHHHHHHH
Confidence            45688999999999999999999999999999999999865321                 1244579999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..++.+.     
T Consensus        86 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  160 (266)
T 3uxy_A           86 GAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG-----  160 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC-----
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-----
Confidence            999999999999999999988888889999999999999999999999999999999888999999999999887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|++.
T Consensus       161 ----------~~~~~Y~asKaa~~~l~~~  179 (266)
T 3uxy_A          161 ----------PGHALYCLTKAALASLTQC  179 (266)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHH
T ss_pred             ----------CCChHHHHHHHHHHHHHHH
Confidence                      8899999999999999874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.3e-31  Score=228.49  Aligned_cols=165  Identities=15%  Similarity=0.098  Sum_probs=144.8

Q ss_pred             CCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           60 LPPVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        60 ~~~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      +.+++||++|||||+  +|||+++|++|+++|++|++++|+.+. .+..+++.+..      .++.++.+|++|.+++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~   98 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEEL------GAFVAGHCDVADAASIDA   98 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHH------TCEEEEECCTTCHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhc------CCceEEECCCCCHHHHHH
Confidence            346889999999999  559999999999999999999999543 33444444432      257889999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +++++.+.+|++|+||||||+..    ..++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+
T Consensus        99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~  176 (293)
T 3grk_A           99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKV  176 (293)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSB
T ss_pred             HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccC
Confidence            99999999999999999999875    467888999999999999999999999999999976  589999999999888


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               ++...|++||+|+++|+|.
T Consensus       177 ~---------------~~~~~Y~asKaa~~~l~~~  196 (293)
T 3grk_A          177 M---------------PNYNVMGVAKAALEASVKY  196 (293)
T ss_dssp             C---------------TTTTHHHHHHHHHHHHHHH
T ss_pred             C---------------CchHHHHHHHHHHHHHHHH
Confidence            7               8889999999999999874

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=3e-32  Score=232.94  Aligned_cols=184  Identities=23%  Similarity=0.311  Sum_probs=148.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~  138 (249)
                      ...+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..     ..++.++.+|++|. ++++++
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~~v~~~   81 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-----HENVVFHQLDVTDPIATMSSL   81 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-----CCSEEEEECCTTSCHHHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEccCCCcHHHHHHH
Confidence            345789999999999999999999999999999999999999988888887632     14789999999998 999999


Q ss_pred             HHHHhccCCCccEEEeccccCCC------------------------------CCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSI------------------------------GEPQKFSKDGYEEHMQVNHLAPALLSI  188 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~------------------------------~~~~~~~~~~~~~~~~vN~~~~~~l~~  188 (249)
                      ++++.+.++++|+||||||+...                              .++.+.+.+++++++++|+.|++.+++
T Consensus        82 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  161 (311)
T 3o26_A           82 ADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTE  161 (311)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHH
Confidence            99999999999999999998632                              234567889999999999999999999


Q ss_pred             HhchhhhcCCCCeEEEEcCCccccCCCCccc----------cc-----------------ccccccc-CCCcccchhhHH
Q 025705          189 LLFPSLIRGSPSRIINVNSVMHYVGFVDTED----------MN-----------------VVSGRRK-YTSLMGYSGSKL  240 (249)
Q Consensus       189 ~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~----------~~-----------------~~~~~~~-~~~~~~Y~asKa  240 (249)
                      +++|+|++++.|+||++||.++..+.....+          +.                 ....... .++...|++||+
T Consensus       162 ~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          162 VLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             HhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            9999999888899999999998876422100          00                 0000011 146678999999


Q ss_pred             HHHhhhhc
Q 025705          241 AQVKLETK  248 (249)
Q Consensus       241 al~~l~~~  248 (249)
                      |+++|++.
T Consensus       242 a~~~~~~~  249 (311)
T 3o26_A          242 CLNAYTRV  249 (311)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-32  Score=230.55  Aligned_cols=178  Identities=23%  Similarity=0.276  Sum_probs=148.2

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC------------hHHHHHHHHHHHHhhcCCCCCCceEE
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN------------LKAANELIQKWQEEWSGKGLPLNIEA  124 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~------------~~~~~~~~~~~~~~~~~~~~~~~v~~  124 (249)
                      |.++.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++...++...      +.++.+
T Consensus         2 p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~   75 (287)
T 3pxx_A            2 PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT------GRKAYT   75 (287)
T ss_dssp             TTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT------TSCEEE
T ss_pred             CCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc------CCceEE
Confidence            456778999999999999999999999999999999999998            66666666666542      247899


Q ss_pred             EEccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEE
Q 025705          125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIIN  204 (249)
Q Consensus       125 ~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~  204 (249)
                      +.+|++|.++++++++++.+.+|++|+||||||+....  .+.+.++|++++++|+.++++++++++|+|.  +.|+||+
T Consensus        76 ~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~  151 (287)
T 3pxx_A           76 AEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIIT  151 (287)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEE
T ss_pred             EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEE
Confidence            99999999999999999999999999999999987544  3478899999999999999999999999993  4589999


Q ss_pred             EcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          205 VNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       205 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +||..++.+....+.    .+....++...|++||+|+++|+|.
T Consensus       152 isS~~~~~~~~~~~~----~~~~~~~~~~~Y~asK~a~~~~~~~  191 (287)
T 3pxx_A          152 TGSVAGLIAAAQPPG----AGGPQGPGGAGYSYAKQLVDSYTLQ  191 (287)
T ss_dssp             ECCHHHHHHHHCCC---------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             eccchhccccccccc----ccccCCCccchHHHHHHHHHHHHHH
Confidence            999988876422111    1112235678899999999999874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-32  Score=227.48  Aligned_cols=165  Identities=22%  Similarity=0.306  Sum_probs=133.5

Q ss_pred             CCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHH
Q 025705           56 NPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSV  135 (249)
Q Consensus        56 ~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v  135 (249)
                      .+.+..+.++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|+++.+++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~   75 (249)
T 3f9i_A            5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---------DNYTIEVCNLANKEEC   75 (249)
T ss_dssp             ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------SSEEEEECCTTSHHHH
T ss_pred             CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---------cCccEEEcCCCCHHHH
Confidence            4556678899999999999999999999999999999999999988877766653         2678889999999999


Q ss_pred             HHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      ++++++    .+++|++|||||+....++.+.+.+++++++++|+.+++.++++++|.|++++.|+||++||.+++.+. 
T Consensus        76 ~~~~~~----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-  150 (249)
T 3f9i_A           76 SNLISK----TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-  150 (249)
T ss_dssp             HHHHHT----CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-
T ss_pred             HHHHHh----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-
Confidence            888765    478999999999987777788899999999999999999999999999998888999999999999887 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       151 --------------~~~~~Y~~sK~a~~~~~~~  169 (249)
T 3f9i_A          151 --------------PGQANYCASKAGLIGMTKS  169 (249)
T ss_dssp             --------------SCSHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCchhHHHHHHHHHHHHH
Confidence                          8889999999999999874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=5.5e-32  Score=227.44  Aligned_cols=156  Identities=28%  Similarity=0.363  Sum_probs=143.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++                 ..++.++.+|++|.++++++++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~~Dl~~~~~v~~~~~   66 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------------EAKYDHIECDVTNPDQVKASID   66 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------------SCSSEEEECCTTCHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------------CCceEEEEecCCCHHHHHHHHH
Confidence            35788999999999999999999999999999999998653                 1367889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.+|++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||.++..+.      
T Consensus        67 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------  140 (264)
T 2dtx_A           67 HIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT------  140 (264)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC------
Confidence            99999999999999999887778888999999999999999999999999999998888999999999988876      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|++.
T Consensus       141 ---------~~~~~Y~~sK~a~~~~~~~  159 (264)
T 2dtx_A          141 ---------KNASAYVTSKHAVIGLTKS  159 (264)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchhHHHHHHHHHHHHHH
Confidence                     7889999999999999874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-31  Score=224.94  Aligned_cols=165  Identities=24%  Similarity=0.220  Sum_probs=145.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...      +.++.++.+|++|.+++++++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL------GGQCVPVVCDSSQESEVRSLFEQ   75 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH------SSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc------CCceEEEECCCCCHHHHHHHHHH
Confidence            367899999999999999999999999999999999998888887777653      14688999999999999999999


Q ss_pred             Hhcc-CCCccEEEeccc--cC-----CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          142 WNGR-LGPLHVLINNAG--IF-----SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       142 ~~~~-~g~id~linnag--~~-----~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +.+. +|++|+||||||  +.     ...++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+
T Consensus        76 ~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  155 (260)
T 2qq5_A           76 VDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY  155 (260)
T ss_dssp             HHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC
T ss_pred             HHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC
Confidence            9876 899999999995  32     245677889999999999999999999999999999888899999999987754


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                      ++...|++||+|+++|+|.
T Consensus       156 ----------------~~~~~Y~asK~a~~~~~~~  174 (260)
T 2qq5_A          156 ----------------MFNVPYGVGKAACDKLAAD  174 (260)
T ss_dssp             ----------------CSSHHHHHHHHHHHHHHHH
T ss_pred             ----------------CCCCchHHHHHHHHHHHHH
Confidence                            3457899999999999874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.98  E-value=7.8e-32  Score=226.61  Aligned_cols=168  Identities=23%  Similarity=0.244  Sum_probs=149.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEE-EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil-~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..++.+|+++||||++|||+++|++|+++|++|++ ..|+.+.+++..+++.+.      +.++.++.+|++|.++++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~~~~~   94 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN------GGNGRLLSFDVANREQCREV   94 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc------CCceEEEEecCCCHHHHHHH
Confidence            44678899999999999999999999999999966 457777788887777663      24789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhh-cCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLI-RGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~-~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.++++|+||||||+....++.+.+.+++++.+++|+.+++.+++.+++.|. +++.|+||++||.++..+.   
T Consensus        95 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  171 (267)
T 4iiu_A           95 LEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN---  171 (267)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC---
T ss_pred             HHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC---
Confidence            999999999999999999998888888999999999999999999999999999887 5677999999999999887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       172 ------------~~~~~Y~asKaa~~~~~~~  190 (267)
T 4iiu_A          172 ------------RGQVNYSAAKAGIIGATKA  190 (267)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHH
Confidence                        8899999999999999874

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.98  E-value=1.4e-31  Score=226.89  Aligned_cols=164  Identities=21%  Similarity=0.336  Sum_probs=144.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++ +++..+++.+.      +.++.++.+|++|.++++++++
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   99 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN------GSDAACVKANVGVVEDIVRMFE   99 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh------CCCeEEEEcCCCCHHHHHHHHH
Confidence            4689999999999999999999999999999999998754 45555555442      2468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|  ++.|+||++||..+..+.      
T Consensus       100 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~------  171 (283)
T 1g0o_A          100 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKA------  171 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSS------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCC------
Confidence            999999999999999999877788889999999999999999999999999999  346899999999888765      


Q ss_pred             ccccccccCC-CcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYT-SLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~-~~~~Y~asKaal~~l~~~  248 (249)
                               + +...|++||+|+++|++.
T Consensus       172 ---------~~~~~~Y~asK~a~~~~~~~  191 (283)
T 1g0o_A          172 ---------VPKHAVYSGSKGAIETFARC  191 (283)
T ss_dssp             ---------CSSCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCCcchHHHHHHHHHHHHH
Confidence                     4 488999999999999874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.98  E-value=1.7e-31  Score=224.40  Aligned_cols=169  Identities=11%  Similarity=0.120  Sum_probs=145.5

Q ss_pred             CCCCCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH
Q 025705           56 NPLPLPPVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD  133 (249)
Q Consensus        56 ~~~~~~~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  133 (249)
                      .+.+..++++|++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+..      .++.++.+|++|.+
T Consensus         5 ~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~------~~~~~~~~Dv~~~~   77 (271)
T 3ek2_A            5 HHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEF------GSELVFPCDVADDA   77 (271)
T ss_dssp             ----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHT------TCCCEEECCTTCHH
T ss_pred             CCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHc------CCcEEEECCCCCHH
Confidence            3456678899999999998  999999999999999999999998543 34445554432      24788999999999


Q ss_pred             HHHHHHHHHhccCCCccEEEeccccCCC----CCCCC-CCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          134 SVVRFSEAWNGRLGPLHVLINNAGIFSI----GEPQK-FSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       134 ~v~~~~~~~~~~~g~id~linnag~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                      +++++++++.+.+|++|+||||||+...    .++.+ .+.+++++++++|+.+++.++++++|+|++  .|+||++||.
T Consensus        78 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~  155 (271)
T 3ek2_A           78 QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYL  155 (271)
T ss_dssp             HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEecc
Confidence            9999999999999999999999998764    55555 899999999999999999999999999975  4799999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+.               ++...|++||+|+++|++.
T Consensus       156 ~~~~~~---------------~~~~~Y~asKaa~~~~~~~  180 (271)
T 3ek2_A          156 GAERAI---------------PNYNTMGLAKAALEASVRY  180 (271)
T ss_dssp             GGTSBC---------------TTTTHHHHHHHHHHHHHHH
T ss_pred             ccccCC---------------CCccchhHHHHHHHHHHHH
Confidence            998887               8899999999999999874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.98  E-value=1.9e-31  Score=221.65  Aligned_cols=165  Identities=25%  Similarity=0.299  Sum_probs=149.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...       .++.++.+|++|.+++++++++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~   75 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-------DQIQFFQHDSSDEDGWTKLFDA   75 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-------TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-------CceEEEECCCCCHHHHHHHHHH
Confidence            578899999999999999999999999999999999988777666554321       3688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++. ++||++||..++.+.      
T Consensus        76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------  149 (251)
T 1zk4_A           76 TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD------  149 (251)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC------
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC------
Confidence            9999999999999999887777888999999999999999999999999999998776 899999999988876      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+++++|++.
T Consensus       150 ---------~~~~~Y~~sK~a~~~~~~~  168 (251)
T 1zk4_A          150 ---------PSLGAYNASKGAVRIMSKS  168 (251)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCccchHHHHHHHHHHHH
Confidence                     7889999999999999863

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.98  E-value=4.4e-32  Score=227.54  Aligned_cols=159  Identities=18%  Similarity=0.250  Sum_probs=142.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+..+               ..++.++.+|++|++++++++++
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~~Dv~d~~~v~~~~~~   89 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------------DPDIHTVAGDISKPETADRIVRE   89 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------------STTEEEEESCTTSHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------------cCceEEEEccCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999999865321               13688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||+....++.+.+.++|++++++|+.|++.++++++|.|++++.|+||++||..+..+..      
T Consensus        90 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------  163 (260)
T 3un1_A           90 GIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMV------  163 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBT------
T ss_pred             HHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCC------
Confidence            99999999999999999888888899999999999999999999999999999998889999999988764431      


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             .++...|++||+|+++|+|.
T Consensus       164 -------~~~~~~Y~~sKaa~~~l~~~  183 (260)
T 3un1_A          164 -------GMPSALASLTKGGLNAVTRS  183 (260)
T ss_dssp             -------TCCCHHHHHHHHHHHHHHHH
T ss_pred             -------CCccHHHHHHHHHHHHHHHH
Confidence                   15668899999999999874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.98  E-value=2.3e-31  Score=225.86  Aligned_cols=169  Identities=22%  Similarity=0.288  Sum_probs=153.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ...++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~d~~~v~~~  111 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF------GYESSGYAGDVSKKEEISEV  111 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc------CCceeEEECCCCCHHHHHHH
Confidence            345678999999999999999999999999999999999988888777776542      24688999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.    
T Consensus       112 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----  187 (285)
T 2c07_A          112 INKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----  187 (285)
T ss_dssp             HHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----
Confidence            9999999999999999999987777888999999999999999999999999999998778999999999988877    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       188 -----------~~~~~Y~asK~a~~~~~~~  206 (285)
T 2c07_A          188 -----------VGQANYSSSKAGVIGFTKS  206 (285)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCchHHHHHHHHHHHHHH
Confidence                       7889999999999999874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.98  E-value=2.6e-31  Score=222.28  Aligned_cols=166  Identities=21%  Similarity=0.295  Sum_probs=149.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.      +.++.++.+|++|.++++++++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~   77 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV------GGEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc------CCceEEEECCCCCHHHHHHHHH
Confidence            467899999999999999999999999999999999 877777777776542      2468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.     
T Consensus        78 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  152 (261)
T 1gee_A           78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-----  152 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC-----
Confidence            9999999999999999988777788889999999999999999999999999999876 7899999999888776     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|++.
T Consensus       153 ----------~~~~~Y~~sK~a~~~~~~~  171 (261)
T 1gee_A          153 ----------PLFVHYAASKGGMKLMTET  171 (261)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCccHHHHHHHHHHHHHHH
Confidence                      7889999999999999864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.98  E-value=8.5e-32  Score=226.97  Aligned_cols=162  Identities=25%  Similarity=0.367  Sum_probs=144.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++          .++.++.+|++|.++++++++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~   74 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----------PGAVFILCDVTQEDDVKTLVS   74 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------cCCeEEEcCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999999999988776654432          136788999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.+|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++ .|+||++||..+..+.     
T Consensus        75 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  148 (270)
T 1yde_A           75 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ-----  148 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCC-----
Confidence            99999999999999999864 3567888999999999999999999999999999865 5899999999888876     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       149 ----------~~~~~Y~asKaa~~~~~~~  167 (270)
T 1yde_A          149 ----------AQAVPYVATKGAVTAMTKA  167 (270)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCcccHHHHHHHHHHHHH
Confidence                      7888999999999999874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.98  E-value=2.3e-31  Score=220.48  Aligned_cols=163  Identities=23%  Similarity=0.339  Sum_probs=148.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      +|+++||||++|||+++|++|+++|+       +|++++|+.+++++..+++...      +.++.++.+|++|.+++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~   75 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE------GALTDTITADISDMADVRR   75 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT------TCEEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc------CCeeeEEEecCCCHHHHHH
Confidence            68999999999999999999999999       9999999988887777666541      2478899999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|+|++++.|+||++||..++.+.   
T Consensus        76 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---  152 (244)
T 2bd0_A           76 LTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---  152 (244)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---
T ss_pred             HHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC---
Confidence            99999999999999999999987777888999999999999999999999999999988778999999999988776   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       153 ------------~~~~~Y~~sK~a~~~~~~~  171 (244)
T 2bd0_A          153 ------------RHSSIYCMSKFGQRGLVET  171 (244)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHH
Confidence                        7888999999999999863

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.98  E-value=1.7e-31  Score=223.88  Aligned_cols=166  Identities=21%  Similarity=0.299  Sum_probs=142.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+|+++||||++|||+++|++|+++|++|++++|+.+...+...+..+..     +.++.++.+|++|.++++++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~   79 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-----EERLQFVQADVTKKEDLHKIVEEA   79 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-----GGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence            457999999999999999999999999999999887665444444433322     247899999999999999999999


Q ss_pred             hccCCCccEEEeccc--cCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc-c-ccCCCCcc
Q 025705          143 NGRLGPLHVLINNAG--IFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM-H-YVGFVDTE  218 (249)
Q Consensus       143 ~~~~g~id~linnag--~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~-~-~~~~~~~~  218 (249)
                      .+.++++|+||||||  .....++.+.+.+++++.+++|+.+++.++++++|+|++++.|+||++||.. + ..+.    
T Consensus        80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~----  155 (264)
T 3i4f_A           80 MSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGW----  155 (264)
T ss_dssp             HHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCC----
T ss_pred             HHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCC----
Confidence            999999999999999  4455678889999999999999999999999999999998889999999983 3 3333    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       156 -----------~~~~~Y~asKaa~~~~~~~  174 (264)
T 3i4f_A          156 -----------IYRSAFAAAKVGLVSLTKT  174 (264)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCchhHHHHHHHHHHHHH
Confidence                       6788999999999999874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.98  E-value=2.5e-32  Score=228.17  Aligned_cols=162  Identities=22%  Similarity=0.318  Sum_probs=138.2

Q ss_pred             cCCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH
Q 025705           55 QNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS  134 (249)
Q Consensus        55 ~~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  134 (249)
                      ..|.+..++++|+++||||++|||+++|++|+++|++|++++|+.++++                 ++.++.+|++|+++
T Consensus        11 ~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~Dl~d~~~   73 (253)
T 2nm0_A           11 SSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------------GFLAVKCDITDTEQ   73 (253)
T ss_dssp             ---------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------------TSEEEECCTTSHHH
T ss_pred             CCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------------cceEEEecCCCHHH
Confidence            3466667889999999999999999999999999999999999865321                 36788999999999


Q ss_pred             HHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          135 VVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       135 v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      ++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..+.
T Consensus        74 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  153 (253)
T 2nm0_A           74 VEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS  153 (253)
T ss_dssp             HHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC
Confidence            99999999999999999999999987777888899999999999999999999999999998778999999999988776


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++...|++||+|+++|++.
T Consensus       154 ---------------~~~~~Y~asK~a~~~~~~~  172 (253)
T 2nm0_A          154 ---------------AGQANYAASKAGLVGFARS  172 (253)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCcHHHHHHHHHHHHHHHH
Confidence                           6788999999999999874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.98  E-value=3.6e-31  Score=224.63  Aligned_cols=164  Identities=13%  Similarity=0.157  Sum_probs=144.6

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+...      .+.++.+|++|.+++++++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~------~~~~~~~Dl~~~~~v~~~~   90 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG------SDLVVKCDVSLDEDIKNLK   90 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT------CCCEEECCTTCHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC------CeEEEEcCCCCHHHHHHHH
Confidence            4789999999999  99999999999999999999999975 4555556554321      3678899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+.+|++|+||||||+...    .++.+.+.+++++++++|+.+++.++++++|+|+++ .|+||++||..+..+. 
T Consensus        91 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-  168 (285)
T 2p91_A           91 KFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVV-  168 (285)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBC-
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCC-
Confidence            9999999999999999998753    567788999999999999999999999999999864 5899999999888776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       169 --------------~~~~~Y~~sK~a~~~~~~~  187 (285)
T 2p91_A          169 --------------PHYNVMGIAKAALESTVRY  187 (285)
T ss_dssp             --------------TTTTHHHHHHHHHHHHHHH
T ss_pred             --------------CCccHHHHHHHHHHHHHHH
Confidence                          7888999999999999874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.98  E-value=4.3e-31  Score=219.94  Aligned_cols=163  Identities=22%  Similarity=0.276  Sum_probs=146.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCce-EEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI-EAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~v~~~~  139 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++ .++.+|++|.+++++++
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~   77 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---------AAVAARIVADVTDAEAMTAAA   77 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------ccceeEEEEecCCHHHHHHHH
Confidence            45789999999999999999999999999999999999888777666552         256 78899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+ ++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+.     
T Consensus        78 ~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  151 (254)
T 2wsb_A           78 AEAEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN-----  151 (254)
T ss_dssp             HHHHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred             HHHHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC-----
Confidence            99988 899999999999887777888899999999999999999999999999998888999999999888765     


Q ss_pred             cccccccccCCCc--ccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSL--MGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~--~~Y~asKaal~~l~~~  248 (249)
                                +..  ..|++||+|+++|++.
T Consensus       152 ----------~~~~~~~Y~~sK~a~~~~~~~  172 (254)
T 2wsb_A          152 ----------RPQFASSYMASKGAVHQLTRA  172 (254)
T ss_dssp             ----------SSSCBHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHH
Confidence                      455  8899999999999874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.98  E-value=4.5e-31  Score=220.55  Aligned_cols=167  Identities=17%  Similarity=0.223  Sum_probs=149.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.++++++++
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~~~   82 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME------GHDVSSVVMDVTNTESVQNAVR   82 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEEecCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888777777552      1468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+.     
T Consensus        83 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----  157 (260)
T 3awd_A           83 SVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN-----  157 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC-----
Confidence            99999999999999999876 567788899999999999999999999999999998778999999999887765     


Q ss_pred             cccccccccCCCc--ccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSL--MGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~--~~Y~asKaal~~l~~~  248 (249)
                                ++.  ..|++||+++++|++.
T Consensus       158 ----------~~~~~~~Y~~sK~a~~~~~~~  178 (260)
T 3awd_A          158 ----------RPQQQAAYNASKAGVHQYIRS  178 (260)
T ss_dssp             ----------SSSCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCccccHHHHHHHHHHHHH
Confidence                      444  8899999999999874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.98  E-value=2.8e-31  Score=222.73  Aligned_cols=168  Identities=26%  Similarity=0.304  Sum_probs=139.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|.+++++++
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~   82 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK------GFQVTGSVCDASLRPEREKLM   82 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeeEEEECCCCCHHHHHHHH
Confidence            34678999999999999999999999999999999999998888877777652      246888999999999999999


Q ss_pred             HHHhccC-CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~-g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+.+ +++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+.    
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----  158 (266)
T 1xq1_A           83 QTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA----  158 (266)
T ss_dssp             HHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------
T ss_pred             HHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC----
Confidence            9999888 89999999999877777888899999999999999999999999999988778999999999988776    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+++++|++.
T Consensus       159 -----------~~~~~Y~~sK~a~~~~~~~  177 (266)
T 1xq1_A          159 -----------SVGSIYSATKGALNQLARN  177 (266)
T ss_dssp             -------------CCHHHHHHHHHHHHHHH
T ss_pred             -----------CCCchHHHHHHHHHHHHHH
Confidence                       7788999999999999874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.98  E-value=2.2e-31  Score=225.54  Aligned_cols=168  Identities=11%  Similarity=0.095  Sum_probs=145.0

Q ss_pred             CCCCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH
Q 025705           57 PLPLPPVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS  134 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  134 (249)
                      +..+.++++|+++||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..      .++.++.+|++|.++
T Consensus        18 ~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~------~~~~~~~~Dl~~~~~   89 (280)
T 3nrc_A           18 GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF------NPAAVLPCDVISDQE   89 (280)
T ss_dssp             ----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG------CCSEEEECCTTCHHH
T ss_pred             CCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc------CCceEEEeecCCHHH
Confidence            445667899999999988  8899999999999999999999987  344555555533      257889999999999


Q ss_pred             HHHHHHHHhccCCCccEEEeccccCCC----CCCCC-CCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          135 VVRFSEAWNGRLGPLHVLINNAGIFSI----GEPQK-FSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       135 v~~~~~~~~~~~g~id~linnag~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                      ++++++++.+.++++|+||||||+...    .++.+ .+.+++++++++|+.+++.++++++|+|+++ .|+||++||.+
T Consensus        90 v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~  168 (280)
T 3nrc_A           90 IKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIG  168 (280)
T ss_dssp             HHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccc
Confidence            999999999999999999999998754    44445 8999999999999999999999999999876 69999999999


Q ss_pred             cccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          210 HYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+.               ++...|++||+|+++|++.
T Consensus       169 ~~~~~---------------~~~~~Y~asKaal~~~~~~  192 (280)
T 3nrc_A          169 AEKAM---------------PSYNTMGVAKASLEATVRY  192 (280)
T ss_dssp             GTSCC---------------TTTHHHHHHHHHHHHHHHH
T ss_pred             cccCC---------------CCchhhHHHHHHHHHHHHH
Confidence            99887               8899999999999999874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.98  E-value=9.6e-32  Score=223.72  Aligned_cols=158  Identities=26%  Similarity=0.361  Sum_probs=134.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..+++++|+++||||++|||+++|++|+++|++|++++|++++++                 ++..+.+|++|.++++++
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~D~~~~~~~~~~   71 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------------GLFGVEVDVTDSDAVDRA   71 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------------TSEEEECCTTCHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-----------------HhcCeeccCCCHHHHHHH
Confidence            445688999999999999999999999999999999999865432                 122478999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+.++++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.    
T Consensus        72 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----  147 (247)
T 1uzm_A           72 FTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----  147 (247)
T ss_dssp             HHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC----
Confidence            9999999999999999999987777888999999999999999999999999999998888999999999988876    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       148 -----------~~~~~Y~~sK~a~~~~~~~  166 (247)
T 1uzm_A          148 -----------GNQANYAASKAGVIGMARS  166 (247)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCChhHHHHHHHHHHHHHH
Confidence                       7888999999999999874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.98  E-value=6.3e-31  Score=222.34  Aligned_cols=170  Identities=25%  Similarity=0.320  Sum_probs=150.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..    ...++.++.+|++|.+++++++
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~  102 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG----YPGTLIPYRCDLSNEEDILSMF  102 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CSSEEEEEECCTTCHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC----CCceEEEEEecCCCHHHHHHHH
Confidence            445789999999999999999999999999999999999988888777776531    1246888999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC--CeEEEEcCCccc--cCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP--SRIINVNSVMHY--VGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~--g~Iv~vsS~~~~--~~~~  215 (249)
                      +++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.  |+||++||..+.  .+. 
T Consensus       103 ~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~-  181 (279)
T 1xg5_A          103 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-  181 (279)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-
T ss_pred             HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC-
Confidence            999999999999999999887777888899999999999999999999999999998763  899999999877  333 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       182 --------------~~~~~Y~~sK~a~~~~~~~  200 (279)
T 1xg5_A          182 --------------SVTHFYSATKYAVTALTEG  200 (279)
T ss_dssp             --------------GGGHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCchhHHHHHHHHHHHHH
Confidence                          6778899999999999863

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.97  E-value=3e-31  Score=224.52  Aligned_cols=164  Identities=20%  Similarity=0.268  Sum_probs=145.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.+++++++
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~---------~~~~~~~~Dl~~~~~v~~~~   95 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG---------NRAEFVSTNVTSEDSVLAAI   95 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---------CceEEEEcCCCCHHHHHHHH
Confidence            456889999999999999999999999999999999999988887776652         36899999999999999999


Q ss_pred             HHHhccCCCccEEEec-cccCCCCCC-----CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc------CCCCeEEEEcC
Q 025705          140 EAWNGRLGPLHVLINN-AGIFSIGEP-----QKFSKDGYEEHMQVNHLAPALLSILLFPSLIR------GSPSRIINVNS  207 (249)
Q Consensus       140 ~~~~~~~g~id~linn-ag~~~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~------~~~g~Iv~vsS  207 (249)
                      +++ +.++++|++||| ||......+     .+.+.+++++.+++|+.+++.++++++|.|.+      ++.|+||++||
T Consensus        96 ~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS  174 (281)
T 3ppi_A           96 EAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTAS  174 (281)
T ss_dssp             HHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECC
T ss_pred             HHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEec
Confidence            999 778999999999 555444433     36788999999999999999999999999987      56789999999


Q ss_pred             CccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          208 VMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+++.+.               ++...|++||+|+++|++.
T Consensus       175 ~~~~~~~---------------~~~~~Y~asKaa~~~~~~~  200 (281)
T 3ppi_A          175 IAGYEGQ---------------IGQTAYAAAKAGVIGLTIA  200 (281)
T ss_dssp             GGGTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ccccCCC---------------CCCcccHHHHHHHHHHHHH
Confidence            9999887               8899999999999999874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.97  E-value=3.8e-32  Score=227.30  Aligned_cols=160  Identities=21%  Similarity=0.238  Sum_probs=134.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++..   +++         ..++.++.+|++|.++++++++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~---------~~~~~~~~~D~~~~~~v~~~~~   72 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL---------GDRARFAAADVTDEAAVASALD   72 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT---------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc---------CCceEEEECCCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999999765432   221         1478999999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCC----CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc--------CCCCeEEEEcCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGE----PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR--------GSPSRIINVNSV  208 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~--------~~~g~Iv~vsS~  208 (249)
                      .+.+ +|++|+||||||+....+    ..+.+.++|++++++|+.+++.++++++|+|++        ++.|+||++||.
T Consensus        73 ~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  151 (257)
T 3tl3_A           73 LAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASV  151 (257)
T ss_dssp             HHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCC
T ss_pred             HHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcch
Confidence            9887 899999999999864332    235789999999999999999999999999998        667899999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+.               ++...|++||+|+++|+|.
T Consensus       152 ~~~~~~---------------~~~~~Y~asKaa~~~~~~~  176 (257)
T 3tl3_A          152 AAFDGQ---------------IGQAAYSASKGGVVGMTLP  176 (257)
T ss_dssp             C--CCH---------------HHHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCC---------------CCCccHHHHHHHHHHHHHH
Confidence            998887               7888999999999999874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.97  E-value=3.6e-31  Score=219.51  Aligned_cols=167  Identities=26%  Similarity=0.386  Sum_probs=151.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+...     .++.++.+|++|.+++++++++
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~   78 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-----VKAHGVEMNLLSEESINKAFEE   78 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC-----CceEEEEccCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888877777654221     3688899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+.       
T Consensus        79 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  151 (248)
T 2pnf_A           79 IYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-------  151 (248)
T ss_dssp             HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-------
Confidence            9999999999999999887777788899999999999999999999999999998878999999999888776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+++++|++.
T Consensus       152 --------~~~~~Y~~sK~a~~~~~~~  170 (248)
T 2pnf_A          152 --------VGQVNYSTTKAGLIGFTKS  170 (248)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCchHHHHHHHHHHHHHH
Confidence                    7788999999999999874

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.97  E-value=3.7e-31  Score=219.85  Aligned_cols=164  Identities=24%  Similarity=0.284  Sum_probs=146.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.     .+.++.++.+|++|.++++++++++.+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA-----YADKVLRVRADVADEGDVNAAIAATME   76 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT-----TGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999988887776665221     124688999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCC---CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          145 RLGPLHVLINNAGIFSIGE---PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .++++|++|||||.....+   +.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.       
T Consensus        77 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  149 (250)
T 2cfc_A           77 QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF-------  149 (250)
T ss_dssp             HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-------
Confidence            9999999999999876555   778899999999999999999999999999998878999999999988776       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       150 --------~~~~~Y~~sK~a~~~~~~~  168 (250)
T 2cfc_A          150 --------PGRSAYTTSKGAVLQLTKS  168 (250)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCchhHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.97  E-value=2.7e-31  Score=224.32  Aligned_cols=163  Identities=15%  Similarity=0.143  Sum_probs=144.3

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+...      .+.++.+|++|.+++++++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~------~~~~~~~D~~~~~~v~~~~   75 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN------SPYVYELDVSKEEHFKSLY   75 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT------CCCEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC------CcEEEEcCCCCHHHHHHHH
Confidence            4678999999999  99999999999999999999999986 5555566655321      3678899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+.+|++|+||||||+...    .++.+.+.+++++++++|+.+++.++++++|+|++  .|+||++||..+..+. 
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~-  152 (275)
T 2pd4_A           76 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYM-  152 (275)
T ss_dssp             HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC-
T ss_pred             HHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCC-
Confidence            9999999999999999998754    56778899999999999999999999999999975  4899999999888776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       153 --------------~~~~~Y~asK~a~~~~~~~  171 (275)
T 2pd4_A          153 --------------AHYNVMGLAKAALESAVRY  171 (275)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCchhhHHHHHHHHHHHHH
Confidence                          7888999999999999874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.97  E-value=3.5e-31  Score=223.24  Aligned_cols=166  Identities=25%  Similarity=0.295  Sum_probs=146.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++|+++||||++|||+++|++|+++|++|+++ .|+.+.+++..+++.+.      +.++.++.+|++|.+++++++++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~   97 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES------GGEAVAIPGDVGNAADIAAMFSA   97 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            357999999999999999999999999999876 77877777777777652      24789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC---CCCeEEEEcCCccccCCCCc
Q 025705          142 WNGRLGPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG---SPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~---~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +.+.++++|+||||||+... .++.+.+.+++++++++|+.+++.++++++|.|.+.   +.|+||++||.++..+.+  
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  175 (272)
T 4e3z_A           98 VDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--  175 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--
T ss_pred             HHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--
Confidence            99999999999999998764 678889999999999999999999999999999873   468999999999988761  


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  +....|++||+|+++|++.
T Consensus       176 ------------~~~~~Y~asKaa~~~~~~~  194 (272)
T 4e3z_A          176 ------------TQYVDYAASKAAIDTFTIG  194 (272)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCcchhHHHHHHHHHHHHH
Confidence                        3667899999999999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=6e-32  Score=250.90  Aligned_cols=163  Identities=23%  Similarity=0.301  Sum_probs=143.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh---------HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL---------KAANELIQKWQEEWSGKGLPLNIEAMELDLLSL  132 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  132 (249)
                      +++||+++||||++|||+++|++|+++|++|++.+|+.         +.++++.+++.+.    +  .++   .+|++|.
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~----g--~~~---~~d~~d~   75 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN----G--GVA---VADYNNV   75 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT----T--CEE---EEECCCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc----C--CeE---EEEcCCH
Confidence            57899999999999999999999999999999998765         5667777776552    1  222   3588888


Q ss_pred             HHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc
Q 025705          133 DSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV  212 (249)
Q Consensus       133 ~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~  212 (249)
                      ++++++++++.+.+|+||+||||||+....++.+++.++|++++++|+.|+++++|+++|+|++++.|+|||+||.++..
T Consensus        76 ~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~  155 (604)
T 2et6_A           76 LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY  155 (604)
T ss_dssp             TCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            88899999999999999999999999877788999999999999999999999999999999988889999999999998


Q ss_pred             CCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          213 GFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +.               ++...|++||+|+.+|+|.
T Consensus       156 ~~---------------~~~~~Y~asKaal~~lt~~  176 (604)
T 2et6_A          156 GN---------------FGQANYASAKSALLGFAET  176 (604)
T ss_dssp             CC---------------TTBHHHHHHHHHHHHHHHH
T ss_pred             CC---------------CCchHHHHHHHHHHHHHHH
Confidence            87               8899999999999999974

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.97  E-value=4.5e-31  Score=219.97  Aligned_cols=156  Identities=22%  Similarity=0.256  Sum_probs=142.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.         +   .    ..+..+.+|++|.+++++++++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~---~----~~~~~~~~D~~d~~~~~~~~~~   67 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E---Q----YPFATEVMDVADAAQVAQVCQR   67 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S---C----CSSEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h---c----CCceEEEcCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999998641         1   1    1267889999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.       
T Consensus        68 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  140 (250)
T 2fwm_X           68 LLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR-------  140 (250)
T ss_dssp             HHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-------
Confidence            9999999999999999987778888999999999999999999999999999998878999999999988876       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       141 --------~~~~~Y~~sK~a~~~~~~~  159 (250)
T 2fwm_X          141 --------IGMSAYGASKAALKSLALS  159 (250)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCchHHHHHHHHHHHHHH
Confidence                    7889999999999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.97  E-value=9.9e-31  Score=223.26  Aligned_cols=170  Identities=16%  Similarity=0.237  Sum_probs=153.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++.++.+|++|.++++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~~~~~   94 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-----NKVHAIQCDVRDPDMVQNT   94 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTCHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CceEEEEeCCCCHHHHHHH
Confidence            44568999999999999999999999999999999999999988888877766421     3688999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhh-cCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLI-RGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~-~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|+ +++.|+||++||..+..+.   
T Consensus        95 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---  171 (302)
T 1w6u_A           95 VSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---  171 (302)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC---
Confidence            999999999999999999987777788889999999999999999999999999998 4456899999999988776   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       172 ------------~~~~~Y~~sK~a~~~~~~~  190 (302)
T 1w6u_A          172 ------------GFVVPSASAKAGVEAMSKS  190 (302)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCcchhHHHHHHHHHHHHH
Confidence                        7888999999999999874

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.97  E-value=7.1e-31  Score=220.47  Aligned_cols=165  Identities=12%  Similarity=0.139  Sum_probs=144.8

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+....+ ..+++.+....    .++.++.+|++|.+++++++
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVHELAGTLDR----NDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHTSSS----CCCEEEECCCSSSHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHHHHHHhcCC----CCceEEeCCCCCHHHHHHHH
Confidence            5789999999999  67999999999999999999999865443 34444443221    26899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+.++++|++|||||+..    ..++.+.+.+++++.+++|+.+++.++++++|+|++  .|+||++||.++..+. 
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~-  155 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVM-  155 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCC-
T ss_pred             HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccC-
Confidence            999999999999999999875    467788999999999999999999999999999975  5899999999999887 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|++.
T Consensus       156 --------------~~~~~Y~asKaa~~~~~~~  174 (266)
T 3oig_A          156 --------------PNYNVMGVAKASLDASVKY  174 (266)
T ss_dssp             --------------TTTHHHHHHHHHHHHHHHH
T ss_pred             --------------CCcchhHHHHHHHHHHHHH
Confidence                          8899999999999999874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.97  E-value=3.8e-31  Score=221.58  Aligned_cols=164  Identities=23%  Similarity=0.265  Sum_probs=146.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|++|.++++++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~   78 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG---------NNCVFAPADVTSEKDVQTALA   78 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC---------TTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC---------CceEEEEcCCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999999887776665541         368899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCC------CCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC------CCCeEEEEcCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQ------KFSKDGYEEHMQVNHLAPALLSILLFPSLIRG------SPSRIINVNSV  208 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~------~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~~g~Iv~vsS~  208 (249)
                      ++.+.++++|+||||||.....++.      +.+.+++++.+++|+.+++.++++++|.|+++      +.|+||++||.
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           79 LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence            9999999999999999987655544      37889999999999999999999999999987      67999999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+.               ++...|++||+|+++|++.
T Consensus       159 ~~~~~~---------------~~~~~Y~~sK~a~~~~~~~  183 (265)
T 2o23_A          159 AAFEGQ---------------VGQAAYSASKGGIVGMTLP  183 (265)
T ss_dssp             HHHHCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             hhcCCC---------------CCCchhHHHHHHHHHHHHH
Confidence            988776               7889999999999999874

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.97  E-value=3e-31  Score=222.11  Aligned_cols=172  Identities=24%  Similarity=0.262  Sum_probs=147.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCC-CCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK-GLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..... ....++.++.+|++|.++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999999888777665554311000 001367889999999999999999


Q ss_pred             HHhccCCCc-cEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          141 AWNGRLGPL-HVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       141 ~~~~~~g~i-d~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++.+.+|++ |+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.    
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  159 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN----  159 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC----
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC----
Confidence            999999998 9999999988777778889999999999999999999999999998866 6899999999888776    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       160 -----------~~~~~Y~~sK~a~~~~~~~  178 (264)
T 2pd6_A          160 -----------VGQTNYAASKAGVIGLTQT  178 (264)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHH
T ss_pred             -----------CCChhhHHHHHHHHHHHHH
Confidence                       7889999999999999864

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=8.3e-31  Score=218.19  Aligned_cols=166  Identities=25%  Similarity=0.297  Sum_probs=149.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.      +.++.++.+|++|+++++++++
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   80 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL------GGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh------CCceEEEEcCCCCHHHHHHHHH
Confidence            3578899999999999999999999999999999999998888777776552      1368889999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++ +.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..+.      
T Consensus        81 ~~~~~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  153 (255)
T 1fmc_A           81 FAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------  153 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC------
Confidence            999999999999999998766555 7889999999999999999999999999998778999999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+++++|++.
T Consensus       154 ---------~~~~~Y~~sK~a~~~~~~~  172 (255)
T 1fmc_A          154 ---------INMTSYASSKAAASHLVRN  172 (255)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCcccHHHHHHHHHHHHH
Confidence                     7888999999999999874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.97  E-value=6.4e-31  Score=216.56  Aligned_cols=160  Identities=23%  Similarity=0.276  Sum_probs=144.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+|+++||||++|||++++++|+++|++|++++|+.+++++..+++          .++.++.+|++|.++++++++++.
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~   73 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----------EGALPLPGDVREEGDWARAVAAME   73 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----------TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------hhceEEEecCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999987776654432          146788999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.         
T Consensus        74 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  144 (234)
T 2ehd_A           74 EAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF---------  144 (234)
T ss_dssp             HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC---------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC---------
Confidence            99999999999999887777888999999999999999999999999999998888999999999988776         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|++||+|+++|++.
T Consensus       145 ------~~~~~Y~~sK~a~~~~~~~  163 (234)
T 2ehd_A          145 ------KGGAAYNASKFGLLGLAGA  163 (234)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------CCCchhhHHHHHHHHHHHH
Confidence                  7888999999999999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.1e-31  Score=221.38  Aligned_cols=157  Identities=25%  Similarity=0.331  Sum_probs=137.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++.. ++          .++.++.+|++|.++++++.  
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----------~~~~~~~~D~~~~~~~~~~~--   69 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----------PGIQTRVLDVTKKKQIDQFA--   69 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----------TTEEEEECCTTCHHHHHHHH--
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----------cCceEEEeeCCCHHHHHHHH--
Confidence            578899999999999999999999999999999999987654432 11          15788999999999988444  


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                        +.++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.       
T Consensus        70 --~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  140 (246)
T 2ag5_A           70 --NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG-------  140 (246)
T ss_dssp             --HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-------
T ss_pred             --HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC-------
Confidence              34689999999999887777888999999999999999999999999999998878999999999888775       


Q ss_pred             cccccccCC-CcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYT-SLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~-~~~~Y~asKaal~~l~~~  248 (249)
                              + +...|++||+|+++|+|.
T Consensus       141 --------~~~~~~Y~~sK~a~~~~~~~  160 (246)
T 2ag5_A          141 --------VVNRCVYSTTKAAVIGLTKS  160 (246)
T ss_dssp             --------CTTBHHHHHHHHHHHHHHHH
T ss_pred             --------CCCCccHHHHHHHHHHHHHH
Confidence                    5 788999999999999874

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.97  E-value=4.5e-31  Score=218.56  Aligned_cols=163  Identities=23%  Similarity=0.311  Sum_probs=147.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEE-EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil-~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ||+++||||++|||+++|++|+++|++|++ .+|+.+++++..+++.+.      +.++.++.+|++|.++++++++++.
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   74 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY------GGQAITFGGDVSKEADVEAMMKTAI   74 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH------TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            589999999999999999999999999998 489888887777776542      1368889999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      +.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|+|++++.|+||++||..+..+.         
T Consensus        75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  145 (244)
T 1edo_A           75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---------  145 (244)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------
T ss_pred             HHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC---------
Confidence            99999999999999987777888899999999999999999999999999998778999999999888776         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            ++...|++||+|+++|++.
T Consensus       146 ------~~~~~Y~~sK~a~~~~~~~  164 (244)
T 1edo_A          146 ------IGQANYAAAKAGVIGFSKT  164 (244)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------CCCccchhhHHHHHHHHHH
Confidence                  7888999999999999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.97  E-value=2.8e-31  Score=220.19  Aligned_cols=166  Identities=22%  Similarity=0.356  Sum_probs=128.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||+++|++|+++|++|+++ .|+++.+++..+++.+.      +.++.++.+|++|.++++++++
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   75 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA------GINVVVAKGDVKNPEDVENMVK   75 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT------TCCEEEEESCTTSHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHH
Confidence            3678999999999999999999999999999998 67777777776666542      1468899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+.      
T Consensus        76 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  149 (247)
T 2hq1_A           76 TAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------  149 (247)
T ss_dssp             HHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------
Confidence            99999999999999999877667778889999999999999999999999999998778999999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|++.
T Consensus       150 ---------~~~~~Y~~sK~a~~~~~~~  168 (247)
T 2hq1_A          150 ---------AGQANYAASKAGLIGFTKS  168 (247)
T ss_dssp             -----------CHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCcHhHHHHHHHHHHHHH
Confidence                     7888999999999999874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=1.2e-30  Score=220.07  Aligned_cols=168  Identities=19%  Similarity=0.247  Sum_probs=147.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +..++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++..    .   .++.++.+|++|.++++++
T Consensus        10 ~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~---~~~~~~~~D~~~~~~~~~~   82 (278)
T 2bgk_A           10 STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----P---DVISFVHCDVTKDEDVRNL   82 (278)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----T---TTEEEEECCTTCHHHHHHH
T ss_pred             CcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC----C---CceEEEECCCCCHHHHHHH
Confidence            34567899999999999999999999999999999999998776665554421    1   2688999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSI--GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++.+.++++|+||||||....  .++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..++.+.  
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--  160 (278)
T 2bgk_A           83 VDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG--  160 (278)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC--
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC--
Confidence            99999999999999999998642  46778899999999999999999999999999998888999999999988776  


Q ss_pred             ccccccccccccCC-CcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYT-SLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~-~~~~Y~asKaal~~l~~~  248 (249)
                                   + +...|++||+++++|++.
T Consensus       161 -------------~~~~~~Y~~sK~a~~~~~~~  180 (278)
T 2bgk_A          161 -------------EGVSHVYTATKHAVLGLTTS  180 (278)
T ss_dssp             -------------TTSCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCcchHHHHHHHHHHHHH
Confidence                         5 778899999999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.97  E-value=7.5e-31  Score=219.98  Aligned_cols=163  Identities=15%  Similarity=0.107  Sum_probs=143.2

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..      ..+.++.+|++|.+++++++
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~------~~~~~~~~D~~~~~~v~~~~   77 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL------GGALLFRADVTQDEELDALF   77 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT------TCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc------CCcEEEECCCCCHHHHHHHH
Confidence            4678999999999  99999999999999999999999975 444555555432      13678899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI----GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+.+|++|+||||||+...    .++.+.+.++|++++++|+.+++.++++++|+|++  .|+||++||..+..+. 
T Consensus        78 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~-  154 (261)
T 2wyu_A           78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVV-  154 (261)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBC-
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCC-
Confidence            9999999999999999998753    56778899999999999999999999999999975  4899999999888776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+++|+|.
T Consensus       155 --------------~~~~~Y~asK~a~~~~~~~  173 (261)
T 2wyu_A          155 --------------PKYNVMAIAKAALEASVRY  173 (261)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCchHHHHHHHHHHHHHHH
Confidence                          7888999999999999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=2.6e-31  Score=246.65  Aligned_cols=163  Identities=25%  Similarity=0.319  Sum_probs=142.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+++||||++|||+++|++|+++|++|++.+++.  ++++.+++.+.      +.++..+.+|++  ++.+++++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~------g~~~~~~~~Dv~--~~~~~~~~  387 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA------GGEAWPDQHDVA--KDSEAIIK  387 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT------TCEEEEECCCHH--HHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc------CCeEEEEEcChH--HHHHHHHH
Confidence            368899999999999999999999999999999998642  34555666542      136777788884  45677888


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+++|+||+||||||+....++.+++.++|++++++|+.|+++++|+++|+|++++.|+|||+||.++..+.      
T Consensus       388 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~------  461 (604)
T 2et6_A          388 NVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN------  461 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC------
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC------
Confidence            88888999999999999987778899999999999999999999999999999998888999999999999887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +++..|++||+|+.+|+|.
T Consensus       462 ---------~~~~~Y~asKaal~~lt~~  480 (604)
T 2et6_A          462 ---------FGQANYSSSKAGILGLSKT  480 (604)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCChhHHHHHHHHHHHHHH
Confidence                     8889999999999999874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.97  E-value=7.5e-31  Score=220.40  Aligned_cols=163  Identities=10%  Similarity=0.092  Sum_probs=142.5

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+...      ...++.+|++|.+++++++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~------~~~~~~~D~~~~~~v~~~~   78 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG------SDIVLQCDVAEDASIDTMF   78 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT------CCCEEECCTTCHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC------CcEEEEccCCCHHHHHHHH
Confidence            4778999999999  9999999999999999999999987 45555556554321      2368899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCC----CCCCC-CCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSI----GEPQK-FSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~----~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      +++.+.+|++|+||||||+...    .++.+ .+.++|++++++|+.+++.++++++|+|.+  .|+||++||..++.+.
T Consensus        79 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~  156 (265)
T 1qsg_A           79 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAI  156 (265)
T ss_dssp             HHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC
T ss_pred             HHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCC
Confidence            9999999999999999998653    55667 899999999999999999999999999975  4899999999888776


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++...|++||+|+++|++.
T Consensus       157 ---------------~~~~~Y~~sK~a~~~~~~~  175 (265)
T 1qsg_A          157 ---------------PNYNVMGLAKASLEANVRY  175 (265)
T ss_dssp             ---------------TTTTHHHHHHHHHHHHHHH
T ss_pred             ---------------CCchHHHHHHHHHHHHHHH
Confidence                           7888999999999999874

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.97  E-value=4.3e-31  Score=227.81  Aligned_cols=164  Identities=21%  Similarity=0.273  Sum_probs=145.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE---------cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV---------RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS  131 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~---------r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  131 (249)
                      .+++||+++||||++|||+++|++|+++|++|++.+         |+.+++++..+++.+..      ..   ..+|+++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~------~~---~~~D~~~   75 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG------GK---AVANYDS   75 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT------CE---EEEECCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC------Ce---EEEeCCC
Confidence            357899999999999999999999999999999964         56777887777776521      12   3489999


Q ss_pred             HHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          132 LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       132 ~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      .++++++++++.+.++++|+||||||+....++.+.+.++|+.++++|+.|++.++++++|+|++++.|+||++||.++.
T Consensus        76 ~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~  155 (319)
T 1gz6_A           76 VEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  155 (319)
T ss_dssp             GGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            99999999999999999999999999887777888999999999999999999999999999998888999999999888


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+.               ++...|++||+|+++|++.
T Consensus       156 ~~~---------------~~~~~Y~aSK~a~~~~~~~  177 (319)
T 1gz6_A          156 YGN---------------FGQANYSAAKLGLLGLANT  177 (319)
T ss_dssp             HCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             cCC---------------CCCHHHHHHHHHHHHHHHH
Confidence            876               7889999999999999874

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.97  E-value=8.5e-31  Score=221.37  Aligned_cols=166  Identities=19%  Similarity=0.180  Sum_probs=146.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.      +.++.++.+|++|.+++++++++
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~  104 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY------GVHSKAYKCNISDPKSVEETISQ  104 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH------CSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcceEEEeecCCHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777666665442      13688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCC-CCCC-CCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC--CCCc
Q 025705          142 WNGRLGPLHVLINNAGIFSI-GEPQ-KFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG--FVDT  217 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~-~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~--~~~~  217 (249)
                      +.+.++++|++|||||.... .++. +.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..+  .   
T Consensus       105 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---  181 (279)
T 3ctm_A          105 QEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP---  181 (279)
T ss_dssp             HHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------
T ss_pred             HHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC---
Confidence            99999999999999998765 5666 788899999999999999999999999999887899999999988776  4   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       182 ------------~~~~~Y~~sK~a~~~~~~~  200 (279)
T 3ctm_A          182 ------------QLQAPYNTAKAACTHLAKS  200 (279)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCcccHHHHHHHHHHHHHH
Confidence                        7788999999999999874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.97  E-value=8.6e-31  Score=219.30  Aligned_cols=176  Identities=22%  Similarity=0.261  Sum_probs=149.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+...     .++.++.+|++|.+++++++
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~~~~~~   83 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-----VKTKAYQCDVSNTDIVTKTI   83 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT-----CCEEEEECCTTCHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC-----CeeEEEEeeCCCHHHHHHHH
Confidence            3457899999999999999999999999999999999987776666666654332     36889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+.++++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.... 
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-  162 (265)
T 1h5q_A           84 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-  162 (265)
T ss_dssp             HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-
Confidence            99999999999999999998777788899999999999999999999999999998765 4899999999887664210 


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ..+..+...|++||+|+++|++.
T Consensus       163 -------~~~~~~~~~Y~~sK~a~~~~~~~  185 (265)
T 1h5q_A          163 -------LNGSLTQVFYNSSKAACSNLVKG  185 (265)
T ss_dssp             -------TTEECSCHHHHHHHHHHHHHHHH
T ss_pred             -------ccccccccccHHHHHHHHHHHHH
Confidence                   01123478899999999999874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.97  E-value=5.7e-31  Score=219.42  Aligned_cols=164  Identities=27%  Similarity=0.333  Sum_probs=145.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++|+++||||++|||+++|++|+++|++|+++ .|+.+.+++..+++.+.      +.++.++.+|++|.++++++++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   77 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN------GGSAFSIGANLESLHGVEALYS   77 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT------TCEEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc------CCceEEEecCcCCHHHHHHHHH
Confidence            3678999999999999999999999999999885 67778888887777652      2478899999999999999999


Q ss_pred             HHhccCC------CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          141 AWNGRLG------PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       141 ~~~~~~g------~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      ++.+.++      ++|+||||||+....++.+.+.+++++++++|+.+++.++++++|+|.+  .|+||++||.++..+.
T Consensus        78 ~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~  155 (255)
T 3icc_A           78 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISL  155 (255)
T ss_dssp             HHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCC
T ss_pred             HHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCC
Confidence            9887653      5999999999987778888999999999999999999999999999954  4799999999998887


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++...|++||+|+++|++.
T Consensus       156 ---------------~~~~~Y~asKaa~~~~~~~  174 (255)
T 3icc_A          156 ---------------PDFIAYSMTKGAINTMTFT  174 (255)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCcchhHHhHHHHHHHHHH
Confidence                           8899999999999999874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.97  E-value=7e-31  Score=218.88  Aligned_cols=166  Identities=22%  Similarity=0.295  Sum_probs=148.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++||||++|||++++++|+++|++|++++|+ ++++++..+++...      +.++.++.+|++|.++++++++
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   77 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD------GGDAAFFAADLATSEACQQLVD   77 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT------TCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc------CCceEEEECCCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999999 78887777776652      2478899999999999999999


Q ss_pred             HHhccCCCccEEEecccc-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--C---CeEEEEcCCcccc-C
Q 025705          141 AWNGRLGPLHVLINNAGI-FSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--P---SRIINVNSVMHYV-G  213 (249)
Q Consensus       141 ~~~~~~g~id~linnag~-~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~---g~Iv~vsS~~~~~-~  213 (249)
                      ++.+.++++|++|||||. ....++.+.+.+++++++++|+.+++.++++++|.|.+++  .   ++||++||..+.. +
T Consensus        78 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  157 (258)
T 3afn_B           78 EFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG  157 (258)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC
T ss_pred             HHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC
Confidence            999999999999999997 5566778889999999999999999999999999998654  3   8999999998876 5


Q ss_pred             CCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .               ++...|++||+++++|++.
T Consensus       158 ~---------------~~~~~Y~~sK~a~~~~~~~  177 (258)
T 3afn_B          158 G---------------PGAGLYGAAKAFLHNVHKN  177 (258)
T ss_dssp             C---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             C---------------CCchHHHHHHHHHHHHHHH
Confidence            5               7888999999999999864

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.97  E-value=2.4e-30  Score=219.56  Aligned_cols=166  Identities=25%  Similarity=0.299  Sum_probs=146.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..     ..++.++.+|++|.++++++++
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~   98 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-----AASAHYIAGTMEDMTFAEQFVA   98 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-----CSEEEEEECCTTCHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-----CCceEEEeCCCCCHHHHHHHHH
Confidence            34789999999999999999999999999999999999999888877776531     1368899999999999999999


Q ss_pred             HHhccCCCccEEEec-cccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINN-AGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linn-ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+.+|++|++||| ||... .++.+.+.+++++++++|+.+++.++++++|.|.++ .|+||++||.++..+.     
T Consensus        99 ~~~~~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  171 (286)
T 1xu9_A           99 QAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAY-----  171 (286)
T ss_dssp             HHHHHHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCC-----
T ss_pred             HHHHHcCCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCC-----
Confidence            999999999999999 56653 345567899999999999999999999999998765 4899999999988876     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|++.
T Consensus       172 ----------~~~~~Y~asK~a~~~~~~~  190 (286)
T 1xu9_A          172 ----------PMVAAYSASKFALDGFFSS  190 (286)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCccHHHHHHHHHHHHHHH
Confidence                      7889999999999999863

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.97  E-value=1.3e-30  Score=215.68  Aligned_cols=163  Identities=24%  Similarity=0.316  Sum_probs=146.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEE-EEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEA-MELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~D~~~~~~v~~~~~~~  142 (249)
                      +|+++||||++|||+++|++|+++|++|+++ +|+.+++++..+++.+.      +.++.. +.+|++|.++++++++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~   74 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR------GSPLVAVLGANLLEAEAATALVHQA   74 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT------TCSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCceEEEEeccCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999998 89988887777766552      124566 889999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..+.        
T Consensus        75 ~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  146 (245)
T 2ph3_A           75 AEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN--------  146 (245)
T ss_dssp             HHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC--------
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC--------
Confidence            999999999999999887677788899999999999999999999999999998778999999999888776        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ++...|++||+|+++|++.
T Consensus       147 -------~~~~~Y~~sK~a~~~~~~~  165 (245)
T 2ph3_A          147 -------PGQANYVASKAGLIGFTRA  165 (245)
T ss_dssp             -------SSBHHHHHHHHHHHHHHHH
T ss_pred             -------CCCcchHHHHHHHHHHHHH
Confidence                   7888999999999999874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=3.9e-30  Score=219.78  Aligned_cols=172  Identities=19%  Similarity=0.307  Sum_probs=151.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ...+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++....... .+.++.++.+|++|.+++++++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPT-KQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTT-CCCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcccc-CCccEEEEecCCCCHHHHHHHH
Confidence            346889999999999999999999999999999999999998888888876532211 1247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+.+|++|+||||||.....++.+.+.+++++.+++|+.+++.++++++|.+.+++.|+||++||.. ..+.     
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~-----  165 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGF-----  165 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCC-----
Confidence            9999999999999999998766778888999999999999999999999999977665568999999987 5555     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+.+|+|.
T Consensus       166 ----------~~~~~Y~~sK~a~~~~~~~  184 (303)
T 1yxm_A          166 ----------PLAVHSGAARAGVYNLTKS  184 (303)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CcchhhHHHHHHHHHHHHH
Confidence                      7888999999999999874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.97  E-value=8.1e-31  Score=215.68  Aligned_cols=155  Identities=17%  Similarity=0.135  Sum_probs=139.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++         ..++.++.+|+++.++++++++++.+.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~~~~~~~~~~   72 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---------SNNVGYRARDLASHQEVEQLFEQLDSI   72 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---------SSCCCEEECCTTCHHHHHHHHHSCSSC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---------hhccCeEeecCCCHHHHHHHHHHHhhc
Confidence            67999999999999999999999999999999998877665543         146789999999999999999887653


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                         .|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|++++ ++||++||..+..+.           
T Consensus        73 ---~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~-----------  137 (230)
T 3guy_A           73 ---PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPK-----------  137 (230)
T ss_dssp             ---CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCC-----------
T ss_pred             ---CCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCC-----------
Confidence               49999999998888888999999999999999999999999999998865 499999999998887           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ++...|++||+|+++|++.
T Consensus       138 ----~~~~~Y~asKaa~~~~~~~  156 (230)
T 3guy_A          138 ----AQESTYCAVKWAVKGLIES  156 (230)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHH
T ss_pred             ----CCCchhHHHHHHHHHHHHH
Confidence                8889999999999999874

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.97  E-value=2.6e-31  Score=247.28  Aligned_cols=171  Identities=23%  Similarity=0.250  Sum_probs=136.3

Q ss_pred             hcCCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc---------ChHHHHHHHHHHHHhhcCCCCCCceEE
Q 025705           54 LQNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR---------NLKAANELIQKWQEEWSGKGLPLNIEA  124 (249)
Q Consensus        54 ~~~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r---------~~~~~~~~~~~~~~~~~~~~~~~~v~~  124 (249)
                      ..++.+..+++||+++||||++|||+++|++|+++|++|++++|         +.+.+++..+++.+..      ..   
T Consensus         8 ~~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~------~~---   78 (613)
T 3oml_A            8 MSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG------GE---   78 (613)
T ss_dssp             -------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT------CC---
T ss_pred             ccCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC------Ce---
Confidence            34556667899999999999999999999999999999999988         6677777777776521      12   


Q ss_pred             EEccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEE
Q 025705          125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIIN  204 (249)
Q Consensus       125 ~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~  204 (249)
                      ..+|++|.++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++.|+|||
T Consensus        79 ~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~  158 (613)
T 3oml_A           79 AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIM  158 (613)
T ss_dssp             EEECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            24799999999999999999999999999999998888889999999999999999999999999999999998899999


Q ss_pred             EcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          205 VNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       205 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +||.++..+.               ++...|++||+|+.+|++.
T Consensus       159 isS~a~~~~~---------------~~~~~Y~asKaal~~lt~~  187 (613)
T 3oml_A          159 TSSNSGIYGN---------------FGQVNYTAAKMGLIGLANT  187 (613)
T ss_dssp             ECCHHHHHCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ECCHHHcCCC---------------CCChHHHHHHHHHHHHHHH
Confidence            9999999887               8899999999999999874

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.97  E-value=1.3e-30  Score=219.48  Aligned_cols=160  Identities=16%  Similarity=0.212  Sum_probs=139.1

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEEcChHHH-HHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           62 PVNDLTCIVTGS--TSGIGREIARQLAESGAHVVMAVRNLKAA-NELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        62 ~~~~~~vlItGa--s~gIG~~ia~~l~~~G~~Vil~~r~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.++. ++.    .++.     +.++.++.+|++|+++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~-----~~~~~~~~~Dv~~~~~v~~~   74 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRI----TDRL-----PAKAPLLELDVQNEEHLASL   74 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHH----HTTS-----SSCCCEEECCTTCHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHH----HHhc-----CCCceEEEccCCCHHHHHHH
Confidence            478899999999  99999999999999999999999997653 333    2222     13578899999999999999


Q ss_pred             HHHHhccCC---CccEEEeccccCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcc
Q 025705          139 SEAWNGRLG---PLHVLINNAGIFS-----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMH  210 (249)
Q Consensus       139 ~~~~~~~~g---~id~linnag~~~-----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~  210 (249)
                      ++++.+.+|   ++|+||||||+..     ..++.+.+.++|++.+++|+.+++.++++++|+|.++  |+||++||..+
T Consensus        75 ~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~  152 (269)
T 2h7i_A           75 AGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS  152 (269)
T ss_dssp             HHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS
T ss_pred             HHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc
Confidence            999999999   9999999999875     4577889999999999999999999999999999763  79999999765


Q ss_pred             ccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          211 YVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       .+.               +.+..|++||+|+++|+|.
T Consensus       153 -~~~---------------~~~~~Y~asKaa~~~l~~~  174 (269)
T 2h7i_A          153 -RAM---------------PAYNWMTVAKSALESVNRF  174 (269)
T ss_dssp             -SCC---------------TTTHHHHHHHHHHHHHHHH
T ss_pred             -ccc---------------CchHHHHHHHHHHHHHHHH
Confidence             444               7888999999999999874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.97  E-value=4.5e-31  Score=228.41  Aligned_cols=168  Identities=23%  Similarity=0.311  Sum_probs=141.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++|+++||||++|||+++|++|+++|++|++++|+...+++..+.+...........++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            36899999999999999999999999999988876554444333333211000112468899999999999999999884


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                        ++++|+||||||+....++.+.+.+++++++++|+.+++.++++++|+|++++.|+|||+||.++..+.         
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~---------  149 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL---------  149 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC---------
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC---------
Confidence              589999999999887778888999999999999999999999999999998778999999999998876         


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            +....|++||+|+++|++.
T Consensus       150 ------~~~~~Y~aSK~a~~~~~~~  168 (327)
T 1jtv_A          150 ------PFNDVYCASKFALEGLCES  168 (327)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHH
T ss_pred             ------CCChHHHHHHHHHHHHHHH
Confidence                  7888999999999999874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.97  E-value=2.4e-30  Score=214.15  Aligned_cols=156  Identities=24%  Similarity=0.301  Sum_probs=138.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||++|||+++|++|+++|++|++++|+.++.   .+++           .+..+.+|++| ++++++++++.+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~-----------~~~~~~~D~~~-~~~~~~~~~~~~   66 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL-----------GAVPLPTDLEK-DDPKGLVKRALE   66 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH-----------TCEEEECCTTT-SCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh-----------CcEEEecCCch-HHHHHHHHHHHH
Confidence            68999999999999999999999999999999998652   2222           15678999999 999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      .++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..++.+..         
T Consensus        67 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  137 (239)
T 2ekp_A           67 ALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------  137 (239)
T ss_dssp             HHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------
Confidence            89999999999998877788899999999999999999999999999999988789999999998876531         


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          .++...|++||+|+++|++.
T Consensus       138 ----~~~~~~Y~~sK~a~~~~~~~  157 (239)
T 2ekp_A          138 ----PVPIPAYTTAKTALLGLTRA  157 (239)
T ss_dssp             ----TSCCHHHHHHHHHHHHHHHH
T ss_pred             ----CCCCccHHHHHHHHHHHHHH
Confidence                15678899999999999874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.97  E-value=6.5e-31  Score=218.25  Aligned_cols=154  Identities=15%  Similarity=0.079  Sum_probs=136.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-E--cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMA-V--RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~-~--r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +|+++||||++|||+++|++|+++|++|+++ +  |+.+++++..+++ .         .     +|+.|.+++++++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~---------~-----~~~~~~~~v~~~~~~   65 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P---------G-----TIALAEQKPERLVDA   65 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T---------T-----EEECCCCCGGGHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C---------C-----CcccCHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9988777665543 1         1     133377788889999


Q ss_pred             HhccCCCccEEEeccccCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          142 WNGRLGPLHVLINNAGIFSI---GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +.+.+|++|+||||||+...   .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.    
T Consensus        66 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----  141 (244)
T 1zmo_A           66 TLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL----  141 (244)
T ss_dssp             HGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC----
Confidence            99999999999999998876   78889999999999999999999999999999998888999999999998877    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|++.
T Consensus       142 -----------~~~~~Y~asK~a~~~~~~~  160 (244)
T 1zmo_A          142 -----------AYNPLYGPARAATVALVES  160 (244)
T ss_dssp             -----------TTCTTHHHHHHHHHHHHHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHH
Confidence                       7889999999999999874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.6e-30  Score=217.23  Aligned_cols=159  Identities=25%  Similarity=0.327  Sum_probs=140.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...    +.++.++.+|++|+++++++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~   80 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE----PQKTLFIQCDVADQQQLRDTFRKV   80 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC----GGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC----CCceEEEecCCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998887776666644211    146889999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC---CCeEEEEcCCccccCCCCccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS---PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      .+.+|++|+||||||...        .++|++.+++|+.+++.+++.++|.|++++   .|+||++||..+..+.     
T Consensus        81 ~~~~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  147 (267)
T 2gdz_A           81 VDHFGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----  147 (267)
T ss_dssp             HHHHSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----
T ss_pred             HHHcCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----
Confidence            999999999999999742        467899999999999999999999998753   6899999999988876     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       148 ----------~~~~~Y~~sK~a~~~~~~~  166 (267)
T 2gdz_A          148 ----------AQQPVYCASKHGIVGFTRS  166 (267)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCchHHHHHHHHHHHHHH
Confidence                      7888999999999999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.97  E-value=9.6e-30  Score=213.92  Aligned_cols=166  Identities=23%  Similarity=0.301  Sum_probs=147.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++.+.      +.++.++.+|++|.++++++
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~~~~~   89 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL------GAQGVAIQADISKPSEVVAL   89 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHH
Confidence            34678999999999999999999999999999999999 777777777666552      24688999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc-cCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY-VGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~-~~~~~~  217 (249)
                      ++++.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|++ + |+||++||..++ .+.   
T Consensus        90 ~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~---  164 (274)
T 1ja9_A           90 FDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGI---  164 (274)
T ss_dssp             HHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCC---
Confidence            9999999999999999999887777888999999999999999999999999999984 3 899999999887 555   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+++++|++.
T Consensus       165 ------------~~~~~Y~~sK~a~~~~~~~  183 (274)
T 1ja9_A          165 ------------PNHALYAGSKAAVEGFCRA  183 (274)
T ss_dssp             ------------CSCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCchHHHHHHHHHHHHHH
Confidence                        7788999999999999874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.97  E-value=7.9e-30  Score=211.19  Aligned_cols=158  Identities=27%  Similarity=0.353  Sum_probs=138.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.          .+.++.+|++|.++++++++ 
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~D~~~~~~~~~~~~-   72 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------GIEPVCVDLGDWEATERALG-   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----------TCEEEECCTTCHHHHHHHHT-
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----------CCCEEEEeCCCHHHHHHHHH-
Confidence            5789999999999999999999999999999999999877665544321          24567999999999988776 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                         .++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.      
T Consensus        73 ---~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  143 (244)
T 3d3w_A           73 ---SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------  143 (244)
T ss_dssp             ---TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------
T ss_pred             ---HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC------
Confidence               468899999999987767788889999999999999999999999999998866 7999999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|++.
T Consensus       144 ---------~~~~~Y~~sK~a~~~~~~~  162 (244)
T 3d3w_A          144 ---------TNHSVYCSTKGALDMLTKV  162 (244)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCchHHHHHHHHHHHHHH
Confidence                     7888999999999999874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.97  E-value=1.6e-30  Score=221.32  Aligned_cols=171  Identities=38%  Similarity=0.615  Sum_probs=145.3

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +..+++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++         ..++.++.+|++|.++++
T Consensus         8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~v~   78 (291)
T 3rd5_A            8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---------AGQVEVRELDLQDLSSVR   78 (291)
T ss_dssp             GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---------SSEEEEEECCTTCHHHHH
T ss_pred             hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------cCCeeEEEcCCCCHHHHH
Confidence            45567899999999999999999999999999999999999988877665443         247899999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++++    +++|+||||||+..  +..+.+.+++++++++|+.+++.++++++|+|.+    +||++||.+++.+...
T Consensus        79 ~~~~~~----~~iD~lv~nAg~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~  148 (291)
T 3rd5_A           79 RFADGV----SGADVLINNAGIMA--VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRIN  148 (291)
T ss_dssp             HHHHTC----CCEEEEEECCCCCS--CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCC
T ss_pred             HHHHhc----CCCCEEEECCcCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCC
Confidence            988875    68999999999864  3466788999999999999999999999999975    8999999999887655


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+++..  ...+.++...|++||+|+++|++.
T Consensus       149 ~~~~~~--~~~~~~~~~~Y~~sK~a~~~~~~~  178 (291)
T 3rd5_A          149 LEDLNW--RSRRYSPWLAYSQSKLANLLFTSE  178 (291)
T ss_dssp             SSCTTC--SSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccc--cccCCCCcchHHHHHHHHHHHHHH
Confidence            444332  224557788999999999999874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.97  E-value=2.5e-30  Score=216.01  Aligned_cols=156  Identities=21%  Similarity=0.262  Sum_probs=136.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+ +.+. .     .++..+     |.++++++++++.+.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~-~-----~~~~~~-----d~~~v~~~~~~~~~~   69 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-Y-----PQLKPM-----SEQEPAELIEAVTSA   69 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-C-----TTSEEC-----CCCSHHHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc-C-----CcEEEE-----CHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999888776654 5432 1     233333     667788888888888


Q ss_pred             CCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      +|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.          
T Consensus        70 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  139 (254)
T 1zmt_A           70 YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----------  139 (254)
T ss_dssp             HSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC----------
T ss_pred             hCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC----------
Confidence            99999999999987 6677888999999999999999999999999999998878999999999998877          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++...|++||+|+++|+|.
T Consensus       140 -----~~~~~Y~~sK~a~~~~~~~  158 (254)
T 1zmt_A          140 -----KELSTYTSARAGACTLANA  158 (254)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHH
T ss_pred             -----CCchHHHHHHHHHHHHHHH
Confidence                 7889999999999999874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-29  Score=209.80  Aligned_cols=158  Identities=28%  Similarity=0.425  Sum_probs=138.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++          ..+.++.+|++|.++++++++ 
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~-   72 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----------PGIEPVCVDLGDWDATEKALG-   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----------TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------cCCCcEEecCCCHHHHHHHHH-
Confidence            578899999999999999999999999999999999987766554331          134567999999999988776 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                         .++++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|.|.+++ .|+||++||..++.+.      
T Consensus        73 ---~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  143 (244)
T 1cyd_A           73 ---GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------  143 (244)
T ss_dssp             ---TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------
T ss_pred             ---HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC------
Confidence               467899999999987767788889999999999999999999999999998876 7899999999888776      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+++++|++.
T Consensus       144 ---------~~~~~Y~~sK~a~~~~~~~  162 (244)
T 1cyd_A          144 ---------PNLITYSSTKGAMTMLTKA  162 (244)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCcchhHHHHHHHHHHHHH
Confidence                     7888999999999999874

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.97  E-value=9e-30  Score=212.34  Aligned_cols=158  Identities=19%  Similarity=0.234  Sum_probs=136.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~  139 (249)
                      ++++|+++||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..+    +.++.++.+|++|. +++++++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP----KVNITFHTYDVTVPVAESKKLL   75 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT----TSEEEEEECCTTSCHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC----CceEEEEEEecCCChHHHHHHH
Confidence            467899999999999999999999999996 9999998642  23344444322    24788999999998 9999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC---CCeEEEEcCCccccCCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS---PSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++.+.++++|+||||||+.        +.+++++.+++|+.+++.++++++|.|.+++   .|+||++||.+++.+.  
T Consensus        76 ~~~~~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  145 (254)
T 1sby_A           76 KKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI--  145 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC--
T ss_pred             HHHHHhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC--
Confidence            99999999999999999973        4577999999999999999999999998764   5899999999988776  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|++.
T Consensus       146 -------------~~~~~Y~~sK~a~~~~~~~  164 (254)
T 1sby_A          146 -------------HQVPVYSASKAAVVSFTNS  164 (254)
T ss_dssp             -------------TTSHHHHHHHHHHHHHHHH
T ss_pred             -------------CCchHHHHHHHHHHHHHHH
Confidence                         7888999999999999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.97  E-value=1.2e-29  Score=228.20  Aligned_cols=163  Identities=26%  Similarity=0.360  Sum_probs=144.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++|+++||||++|||+++|++|+++|++|++++|+... ++.. +..+.       ..+.++.||++|.+++++++++
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~-~~~~~-------~~~~~~~~Dvtd~~~v~~~~~~  280 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLK-RVADK-------VGGTALTLDVTADDAVDKITAH  280 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHH-HHHHH-------HTCEEEECCTTSTTHHHHHHHH
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHH-HHHHH-------cCCeEEEEecCCHHHHHHHHHH
Confidence            4689999999999999999999999999999999997532 2222 22221       1356889999999999999999


Q ss_pred             HhccCCC-ccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGP-LHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~-id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+.+++ +|++|||||+.....+.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||+++..+.      
T Consensus       281 ~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~------  354 (454)
T 3u0b_A          281 VTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN------  354 (454)
T ss_dssp             HHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC------
T ss_pred             HHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC------
Confidence            9999986 999999999988888899999999999999999999999999999998888999999999999888      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +++..|++||+|+++|++.
T Consensus       355 ---------~g~~~YaasKaal~~l~~~  373 (454)
T 3u0b_A          355 ---------RGQTNYATTKAGMIGLAEA  373 (454)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCHHHHHHHHHHHHHHHH
Confidence                     8999999999999999874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.97  E-value=4.8e-30  Score=212.98  Aligned_cols=151  Identities=17%  Similarity=0.192  Sum_probs=134.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~-~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++|+++||||++|||+++|++|++ .|++|++.+|+.+..                ..++.++.+|++|.++++++++.
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v~~~~~~   65 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----------------AENLKFIKADLTKQQDITNVLDI   65 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----------------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----------------cccceEEecCcCCHHHHHHHHHH
Confidence            3578999999999999999999999 788999999875410                13578899999999999999965


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.  ++++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|+++  |+||++||..+..+.       
T Consensus        66 ~~--~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~-------  134 (244)
T 4e4y_A           66 IK--NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAK-------  134 (244)
T ss_dssp             TT--TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCC-------
T ss_pred             HH--hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCC-------
Confidence            54  6799999999999887888999999999999999999999999999999775  799999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       135 --------~~~~~Y~asKaa~~~~~~~  153 (244)
T 4e4y_A          135 --------PNSFAYTLSKGAIAQMTKS  153 (244)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------CCCchhHHHHHHHHHHHHH
Confidence                    8889999999999999874

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.97  E-value=7.8e-30  Score=212.66  Aligned_cols=155  Identities=10%  Similarity=0.085  Sum_probs=134.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +..+..+|+++||||++|||+++|++|+++|++|++++|+.++.+                  -..+.+|++|.++++++
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------------~~~~~~d~~d~~~v~~~   77 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------------DHSFTIKDSGEEEIKSV   77 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------------SEEEECSCSSHHHHHHH
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------------ccceEEEeCCHHHHHHH
Confidence            344556899999999999999999999999999999999875421                  23568999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGE-PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+.++++|+||||||+....+ +.+.+.+++++++++|+.+++.++++++|.|++  .|+||++||..+..+.   
T Consensus        78 ~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~---  152 (251)
T 3orf_A           78 IEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRT---  152 (251)
T ss_dssp             HHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC---
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCC---
Confidence            9999999999999999999876554 677889999999999999999999999999976  4799999999998887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+++|++.
T Consensus       153 ------------~~~~~Y~~sKaa~~~~~~~  171 (251)
T 3orf_A          153 ------------SGMIAYGATKAATHHIIKD  171 (251)
T ss_dssp             ------------TTBHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHH
Confidence                        8899999999999999874

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.97  E-value=2.1e-29  Score=220.22  Aligned_cols=164  Identities=11%  Similarity=0.023  Sum_probs=137.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEEcChHHHH------------HHHHHHHHhhcCCCCCCceEEEEccC
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAAN------------ELIQKWQEEWSGKGLPLNIEAMELDL  129 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~-~G~~Vil~~r~~~~~~------------~~~~~~~~~~~~~~~~~~v~~~~~D~  129 (249)
                      -.+|++|||||++|||+++|+.|++ .|++|++++|+.+..+            ...+++.+      .+.++..+.+|+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~------~G~~a~~i~~Dv  118 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ------KGLYAKSINGDA  118 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH------TTCCEEEEESCT
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh------cCCceEEEECCC
Confidence            4679999999999999999999999 9999999998765432            12223333      124688899999


Q ss_pred             CCHHHHHHHHHHHhccCCCccEEEeccccC-------------CCCCC---------------------CCCCHHHHHHH
Q 025705          130 LSLDSVVRFSEAWNGRLGPLHVLINNAGIF-------------SIGEP---------------------QKFSKDGYEEH  175 (249)
Q Consensus       130 ~~~~~v~~~~~~~~~~~g~id~linnag~~-------------~~~~~---------------------~~~~~~~~~~~  175 (249)
                      +|+++++++++++.+.+|++|+||||||..             ...++                     .+.++++|+++
T Consensus       119 td~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~  198 (405)
T 3zu3_A          119 FSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDST  198 (405)
T ss_dssp             TSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHH
Confidence            999999999999999999999999999974             23344                     67899999999


Q ss_pred             HHhhhhHHH-HHHHHhch-hhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCc--ccchhhHHHHHhhhhc
Q 025705          176 MQVNHLAPA-LLSILLFP-SLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL--MGYSGSKLAQVKLETK  248 (249)
Q Consensus       176 ~~vN~~~~~-~l~~~~l~-~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~asKaal~~l~~~  248 (249)
                      +++|..+.+ ++++++++ .|++ ++|+|||+||+.+..+.               |.+  ..|++||+|+++|+|.
T Consensus       199 v~Vn~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~---------------p~~~~~aY~AaKaal~~ltrs  259 (405)
T 3zu3_A          199 VAVMGGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITH---------------DIYWNGSIGAAKKDLDQKVLA  259 (405)
T ss_dssp             HHHHSSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGT---------------TTTTTSHHHHHHHHHHHHHHH
T ss_pred             HHhhchhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcC---------------CCccchHHHHHHHHHHHHHHH
Confidence            999999998 78888775 4554 45899999999998887               776  8999999999999984

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.96  E-value=4.3e-30  Score=212.89  Aligned_cols=153  Identities=12%  Similarity=0.048  Sum_probs=136.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++|+++||||++|||+++|++|+++|++|++++|+.++.+                ....++.+|++|.++++++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~~D~~~~~~v~~~~~~~   68 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------------SASVIVKMTDSFTEQADQVTAEV   68 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------------SEEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------------CCcEEEEcCCCCHHHHHHHHHHH
Confidence            46799999999999999999999999999999999875431                13567789999999999999999


Q ss_pred             hccC--CCccEEEeccccCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          143 NGRL--GPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       143 ~~~~--g~id~linnag~~~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      .+.+  +++|+||||||+....++ .+.+.+++++.+++|+.+++.++++++|+|++  .|+||++||..++.+.     
T Consensus        69 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~-----  141 (241)
T 1dhr_A           69 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGT-----  141 (241)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC-----
T ss_pred             HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCC-----
Confidence            9988  799999999998766666 77889999999999999999999999999976  3899999999998877     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|++.
T Consensus       142 ----------~~~~~Y~asK~a~~~~~~~  160 (241)
T 1dhr_A          142 ----------PGMIGYGMAKGAVHQLCQS  160 (241)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHH
T ss_pred             ----------CCchHHHHHHHHHHHHHHH
Confidence                      7889999999999999874

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=4e-30  Score=212.35  Aligned_cols=152  Identities=14%  Similarity=0.072  Sum_probs=136.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++|+++||||++|||+++|++|+++|++|++++|++++.+                ....++.+|++|.++++++++++.
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~   65 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------------DSNILVDGNKNWTEQEQSILEQTA   65 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------------SEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------------cccEEEeCCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999875431                135677899999999999999999


Q ss_pred             ccC--CCccEEEeccccCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          144 GRL--GPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       144 ~~~--g~id~linnag~~~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+  +++|+||||||+....++ .+.+.+++++.+++|+.+++.++++++|+|++  .|+||++||..++.+.      
T Consensus        66 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~------  137 (236)
T 1ooe_A           66 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPT------  137 (236)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC------
T ss_pred             HHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCC------
Confidence            988  799999999998766666 77888999999999999999999999999976  4899999999988876      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|++.
T Consensus       138 ---------~~~~~Y~~sK~a~~~~~~~  156 (236)
T 1ooe_A          138 ---------PSMIGYGMAKAAVHHLTSS  156 (236)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCcHHHHHHHHHHHHHHHH
Confidence                     8889999999999999874

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.96  E-value=1.5e-30  Score=225.22  Aligned_cols=168  Identities=13%  Similarity=0.135  Sum_probs=136.8

Q ss_pred             CCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHH-H-HHHH---HHHHHhhcC-CCCCCceEEEEccCCCH--H
Q 025705           64 NDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKA-A-NELI---QKWQEEWSG-KGLPLNIEAMELDLLSL--D  133 (249)
Q Consensus        64 ~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~-~-~~~~---~~~~~~~~~-~~~~~~v~~~~~D~~~~--~  133 (249)
                      .+|++|||||++  |||+++|++|+++|++|++.+|++.. + ....   +........ ......+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            368999999986  99999999999999999988876521 0 0000   011111111 11113478889999988  8


Q ss_pred             ------------------HHHHHHHHHhccCCCccEEEeccccC--CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchh
Q 025705          134 ------------------SVVRFSEAWNGRLGPLHVLINNAGIF--SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPS  193 (249)
Q Consensus       134 ------------------~v~~~~~~~~~~~g~id~linnag~~--~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~  193 (249)
                                        +++++++++.+.+|++|+||||||+.  ...++.+.+.++|++++++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999974  3567889999999999999999999999999999


Q ss_pred             hhcCCCCeEEEEcCCccccCCCCccccccccccccCCCcc-cchhhHHHHHhhhhc
Q 025705          194 LIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLM-GYSGSKLAQVKLETK  248 (249)
Q Consensus       194 m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~asKaal~~l~~~  248 (249)
                      |+++  |+||++||.++..+.               ++.. .|++||+|+.+|++.
T Consensus       161 m~~~--g~Iv~isS~~~~~~~---------------~~~~~~Y~asKaal~~~~~~  199 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVV---------------PGYGGGMSSAKAALESDTRV  199 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCC---------------TTCTTTHHHHHHHHHHHHHH
T ss_pred             HhhC--CeEEEEeCccccCCC---------------CcchHHHHHHHHHHHHHHHH
Confidence            9885  899999999998887               7775 999999999999874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.96  E-value=3e-29  Score=210.36  Aligned_cols=173  Identities=24%  Similarity=0.315  Sum_probs=143.6

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcC---CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESG---AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD  133 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G---~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  133 (249)
                      ..+..++++|+++||||++|||+++|++|+++|   ++|++++|+.++++.. +++.+.      ..++.++.+|++|.+
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~------~~~~~~~~~Dl~~~~   85 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN------HSNIHILEIDLRNFD   85 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH------CTTEEEEECCTTCGG
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc------CCceEEEEecCCChH
Confidence            344557889999999999999999999999999   9999999998765543 344332      136889999999999


Q ss_pred             HHHHHHHHHhccCC--CccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC------C-----C
Q 025705          134 SVVRFSEAWNGRLG--PLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG------S-----P  199 (249)
Q Consensus       134 ~v~~~~~~~~~~~g--~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~-----~  199 (249)
                      +++++++++.+.++  ++|+||||||+.. ..++.+.+.+++++.+++|+.+++.++++++|.|+++      +     .
T Consensus        86 ~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~  165 (267)
T 1sny_A           86 AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGR  165 (267)
T ss_dssp             GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTT
T ss_pred             HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCC
Confidence            99999999999888  8999999999876 6677888999999999999999999999999999876      3     5


Q ss_pred             CeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          200 SRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       200 g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      |+||++||..+..+..            ..++...|++||+|+++|++.
T Consensus       166 ~~iv~isS~~~~~~~~------------~~~~~~~Y~~sK~a~~~~~~~  202 (267)
T 1sny_A          166 AAIINMSSILGSIQGN------------TDGGMYAYRTSKSALNAATKS  202 (267)
T ss_dssp             CEEEEECCGGGCSTTC------------CSCCCHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecccccccCC------------CCCCchHHHHHHHHHHHHHHH
Confidence            8999999998877641            113677899999999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.96  E-value=1.3e-29  Score=207.70  Aligned_cols=140  Identities=21%  Similarity=0.192  Sum_probs=127.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+                          +|++|++++++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------------~D~~~~~~v~~~~~~   56 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------------LDISDEKSVYHYFET   56 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------------CCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------------cCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999998753                          799999999999886


Q ss_pred             HhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +    +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.      
T Consensus        57 ~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~------  124 (223)
T 3uce_A           57 I----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVV------  124 (223)
T ss_dssp             H----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCC------
T ss_pred             h----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCC------
Confidence            5    7899999999987 5667889999999999999999999999999999976  4799999999998887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       125 ---------~~~~~Y~asK~a~~~~~~~  143 (223)
T 3uce_A          125 ---------ANTYVKAAINAAIEATTKV  143 (223)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchHHHHHHHHHHHHHHH
Confidence                     8889999999999999874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=3.4e-29  Score=207.40  Aligned_cols=169  Identities=23%  Similarity=0.318  Sum_probs=143.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++|+++||||++|||++++++|+++|  ++|++++|+.+++++..    +.     ...++.++.+|++|.++++++++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~----~~-----~~~~~~~~~~D~~~~~~~~~~~~   71 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI-----KDSRVHVLPLTVTCDKSLDTFVS   71 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC-----CCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH----hc-----cCCceEEEEeecCCHHHHHHHHH
Confidence            357899999999999999999999999  99999999987765432    21     12478999999999999999999


Q ss_pred             HHhccCC--CccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC------C-----CCeEEEEc
Q 025705          141 AWNGRLG--PLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG------S-----PSRIINVN  206 (249)
Q Consensus       141 ~~~~~~g--~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~-----~g~Iv~vs  206 (249)
                      ++.+.+|  ++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.++      +     .|+||++|
T Consensus        72 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  151 (250)
T 1yo6_A           72 KVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             HHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             HHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEec
Confidence            9999888  8999999999876 6778888999999999999999999999999999876      5     78999999


Q ss_pred             CCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          207 SVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       207 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      |..+..+....        ....++...|++||+|+++|++.
T Consensus       152 S~~~~~~~~~~--------~~~~~~~~~Y~~sK~a~~~~~~~  185 (250)
T 1yo6_A          152 SGLGSITDNTS--------GSAQFPVLAYRMSKAAINMFGRT  185 (250)
T ss_dssp             CGGGCSTTCCS--------TTSSSCBHHHHHHHHHHHHHHHH
T ss_pred             cCccccCCccc--------ccccCCccHHHHHHHHHHHHHHH
Confidence            99887764211        01114677899999999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.96  E-value=2.5e-29  Score=209.39  Aligned_cols=156  Identities=19%  Similarity=0.218  Sum_probs=131.8

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +.+...+++|+++||||++|||+++|++|+++|++|++++|+.+.++    ++          .++.++ +|+  .++++
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~----------~~~~~~-~D~--~~~~~   73 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS----------GHRYVV-CDL--RKDLD   73 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT----------CSEEEE-CCT--TTCHH
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh----------CCeEEE-eeH--HHHHH
Confidence            34456789999999999999999999999999999999999973321    11          145666 999  55677


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++++.    ++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..++.+.  
T Consensus        74 ~~~~~~~----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  147 (249)
T 1o5i_A           74 LLFEKVK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI--  147 (249)
T ss_dssp             HHHHHSC----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--
T ss_pred             HHHHHhc----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC--
Confidence            7777653    7999999999877777888999999999999999999999999999998888999999999988876  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++...|++||+|+++|++.
T Consensus       148 -------------~~~~~Y~~sK~a~~~~~~~  166 (249)
T 1o5i_A          148 -------------ENLYTSNSARMALTGFLKT  166 (249)
T ss_dssp             -------------TTBHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCchHHHHHHHHHHHHHH
Confidence                         7889999999999999874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.96  E-value=1.1e-29  Score=223.82  Aligned_cols=164  Identities=12%  Similarity=0.063  Sum_probs=135.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEEcChHHHHH------------HHHHHHHhhcCCCCCCceEEEEccCC
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAANE------------LIQKWQEEWSGKGLPLNIEAMELDLL  130 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~-~G~~Vil~~r~~~~~~~------------~~~~~~~~~~~~~~~~~v~~~~~D~~  130 (249)
                      .+|++|||||++|||+++|+.|++ .|++|++++|+.+.+++            ..+++.+      .+.++..+.+|++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~------~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA------AGLYSKSINGDAF  133 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH------TTCCEEEEESCTT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh------cCCcEEEEEecCC
Confidence            489999999999999999999999 99999999998654332            2233333      1247889999999


Q ss_pred             CHHHHHHHHHHHhccC-CCccEEEeccccC-------------CCCCC---------------------CCCCHHHHHHH
Q 025705          131 SLDSVVRFSEAWNGRL-GPLHVLINNAGIF-------------SIGEP---------------------QKFSKDGYEEH  175 (249)
Q Consensus       131 ~~~~v~~~~~~~~~~~-g~id~linnag~~-------------~~~~~---------------------~~~~~~~~~~~  175 (249)
                      |+++++++++++.+.+ |+||+||||||..             ...++                     .+.+.++|+++
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~  213 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDT  213 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHH
Confidence            9999999999999999 9999999999972             22343                     35799999999


Q ss_pred             HHhhhhHHH-HHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCc--ccchhhHHHHHhhhhc
Q 025705          176 MQVNHLAPA-LLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL--MGYSGSKLAQVKLETK  248 (249)
Q Consensus       176 ~~vN~~~~~-~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~asKaal~~l~~~  248 (249)
                      +++|..+.+ .+++++++.+...++|+|||+||+.+..+.               |.+  +.|++||+|+.+|+|.
T Consensus       214 v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~---------------p~~~~~aY~ASKaAl~~lTrs  274 (422)
T 3s8m_A          214 ITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW---------------PIYWHGALGKAKVDLDRTAQR  274 (422)
T ss_dssp             HHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH---------------HHHTSHHHHHHHHHHHHHHHH
T ss_pred             HHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC---------------CCccchHHHHHHHHHHHHHHH
Confidence            999999997 888887764433345899999999988876               666  8999999999999984

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.96  E-value=3e-30  Score=214.24  Aligned_cols=158  Identities=24%  Similarity=0.231  Sum_probs=118.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||++|||+++|++|++ |++|++++|+.+++++..+ +          .++.++.+|+++.+. .+.+.+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~----------~~~~~~~~D~~~~~~-~~~~~~   68 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I----------EGVEPIESDIVKEVL-EEGGVD   68 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S----------TTEEEEECCHHHHHH-TSSSCG
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h----------cCCcceecccchHHH-HHHHHH
Confidence            36789999999999999999999998 9999999999877665532 0          257889999998877 444555


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      ..+.++++|++|||||+....++.+.+.+++++++++|+.+++.++++++|.|++++ |+||++||.++..+.       
T Consensus        69 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-------  140 (245)
T 3e9n_A           69 KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH-------  140 (245)
T ss_dssp             GGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC-------
Confidence            556778999999999998878888889999999999999999999999999998765 899999999998887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|++.
T Consensus       141 --------~~~~~Y~asK~a~~~~~~~  159 (245)
T 3e9n_A          141 --------PGNTIYAASKHALRGLADA  159 (245)
T ss_dssp             ----------CHHHHHHHHHHHHHHHH
T ss_pred             --------CCchHHHHHHHHHHHHHHH
Confidence                    8889999999999999874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=1.5e-28  Score=224.66  Aligned_cols=164  Identities=18%  Similarity=0.186  Sum_probs=143.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEE-EcCh-------------HHHHHHHHHHHHhhcCCCCCCceEEEEc
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAH-VVMA-VRNL-------------KAANELIQKWQEEWSGKGLPLNIEAMEL  127 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~  127 (249)
                      .+++++|||||++|||+++|++|+++|++ |+++ +|+.             +.+++..+++.+.      +.++.++.|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~------g~~v~~~~~  322 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL------GATATVVTC  322 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH------TCEEEEEEC
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc------CCEEEEEEC
Confidence            36899999999999999999999999997 7777 8883             4455666666552      257999999


Q ss_pred             cCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEc
Q 025705          128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVN  206 (249)
Q Consensus       128 D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vs  206 (249)
                      |++|.++++++++++. .+++||+||||||+...+.+.+.+.+++++++++|+.|++++.+++.+.|++++ .++||++|
T Consensus       323 Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~S  401 (525)
T 3qp9_A          323 DLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFS  401 (525)
T ss_dssp             CTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEEC
Confidence            9999999999999998 789999999999998888899999999999999999999999999999998876 78999999


Q ss_pred             CCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          207 SVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       207 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      |+++..+.               +++..|+++|+++++|+++
T Consensus       402 S~a~~~g~---------------~g~~~YaaaKa~l~~lA~~  428 (525)
T 3qp9_A          402 SVAAIWGG---------------AGQGAYAAGTAFLDALAGQ  428 (525)
T ss_dssp             EGGGTTCC---------------TTCHHHHHHHHHHHHHHTS
T ss_pred             CHHHcCCC---------------CCCHHHHHHHHHHHHHHHH
Confidence            99999998               8999999999999999875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.96  E-value=3.1e-28  Score=204.30  Aligned_cols=142  Identities=27%  Similarity=0.360  Sum_probs=124.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~-~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++|+++||||++|||+++|++|++ +|++|++++|+.+++++..+++...      +.++.++.+|++|.+++++++++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~~~~~~~~~~   75 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE------GLSPRFHQLDIDDLQSIRALRDF   75 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT------TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc------CCeeEEEECCCCCHHHHHHHHHH
Confidence            3579999999999999999999999 9999999999998888887777652      13678999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCC-HHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFS-KDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~-~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      +.+.++++|+||||||...... .+.+ .+++++++++|+.+++.++++++|.|++  .|+||++||..++.+
T Consensus        76 ~~~~~g~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~  145 (276)
T 1wma_A           76 LRKEYGGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRA  145 (276)
T ss_dssp             HHHHHSSEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHH
T ss_pred             HHHhcCCCCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcc
Confidence            9999999999999999865433 3334 5889999999999999999999999976  379999999988754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.95  E-value=2.5e-28  Score=210.01  Aligned_cols=169  Identities=17%  Similarity=0.143  Sum_probs=131.1

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEEcChHH------H-HHHHHHHHHhhcCCCCCCceEEEEc-----
Q 025705           62 PVNDLTCIVTGS--TSGIGREIARQLAESGAHVVMAVRNLKA------A-NELIQKWQEEWSGKGLPLNIEAMEL-----  127 (249)
Q Consensus        62 ~~~~~~vlItGa--s~gIG~~ia~~l~~~G~~Vil~~r~~~~------~-~~~~~~~~~~~~~~~~~~~v~~~~~-----  127 (249)
                      +++||+++||||  ++|||+++|++|+++|++|++++|++..      . ++..+++. +.........+.++.+     
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDR-KLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHH-BCTTSCBCCCSCEEECCTTCS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhh-hhhcccccccccccccccccc
Confidence            478999999999  8999999999999999999999987421      0 01111221 1111000001233333     


Q ss_pred             -------cCCC--------HHHHHHHHHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHh
Q 025705          128 -------DLLS--------LDSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILL  190 (249)
Q Consensus       128 -------D~~~--------~~~v~~~~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~  190 (249)
                             |++|        .++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++++++|+.+++.+++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  164 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF  164 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence                   3343        66899999999999999999999999763  467788999999999999999999999999


Q ss_pred             chhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCc-ccchhhHHHHHhhhhc
Q 025705          191 FPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL-MGYSGSKLAQVKLETK  248 (249)
Q Consensus       191 l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~asKaal~~l~~~  248 (249)
                      +|+|+++  |+||++||.++..+.               ++. ..|++||+|+++|+|.
T Consensus       165 ~~~m~~~--g~Iv~isS~~~~~~~---------------~~~~~~Y~asKaal~~l~~~  206 (315)
T 2o2s_A          165 GPIMNEG--GSAVTLSYLAAERVV---------------PGYGGGMSSAKAALESDTRT  206 (315)
T ss_dssp             STTEEEE--EEEEEEEEGGGTSCC---------------TTCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHhcC--CEEEEEecccccccC---------------CCccHHHHHHHHHHHHHHHH
Confidence            9999763  899999999988776               666 5899999999999874

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1e-27  Score=197.86  Aligned_cols=150  Identities=23%  Similarity=0.238  Sum_probs=132.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|+++||||++|||+++|++|+++|++|++++|+.+ .                 .++.++.+|++|.++++++++++ +
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------------~~~~~~~~D~~~~~~~~~~~~~~-~   62 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------------EDLIYVEGDVTREEDVRRAVARA-Q   62 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------------SSSEEEECCTTCHHHHHHHHHHH-H
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------------cceEEEeCCCCCHHHHHHHHHHH-H
Confidence            689999999999999999999999999999999864 1                 14578899999999999999999 7


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCH----HHHHHHHHhhhhHHHHHHHHhchhhhcCC---C---CeEEEEcCCccccCC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSK----DGYEEHMQVNHLAPALLSILLFPSLIRGS---P---SRIINVNSVMHYVGF  214 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~----~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~---g~Iv~vsS~~~~~~~  214 (249)
                      .++++|++|||||.....++.+.+.    +++++.+++|+.+++.++++++|.|.+++   .   |+||++||..++.+.
T Consensus        63 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  142 (242)
T 1uay_A           63 EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ  142 (242)
T ss_dssp             HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC
T ss_pred             hhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC
Confidence            7889999999999876666655544    49999999999999999999999998764   3   499999999988776


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++...|++||+|+++|++.
T Consensus       143 ---------------~~~~~Y~~sK~a~~~~~~~  161 (242)
T 1uay_A          143 ---------------IGQAAYAASKGGVVALTLP  161 (242)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCchhhHHHHHHHHHHHH
Confidence                           7889999999999999864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.95  E-value=5.6e-28  Score=206.07  Aligned_cols=169  Identities=15%  Similarity=0.129  Sum_probs=130.3

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEEcChHHHH-------HHHHHHHHhhcCCCCCCceEEEEcc----
Q 025705           62 PVNDLTCIVTGST--SGIGREIARQLAESGAHVVMAVRNLKAAN-------ELIQKWQEEWSGKGLPLNIEAMELD----  128 (249)
Q Consensus        62 ~~~~~~vlItGas--~gIG~~ia~~l~~~G~~Vil~~r~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~D----  128 (249)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|++....       +..+++ ++............+.+|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceecc
Confidence            5789999999999  99999999999999999999998742210       000111 111100000012333333    


Q ss_pred             ----CC----C--------HHHHHHHHHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHh
Q 025705          129 ----LL----S--------LDSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILL  190 (249)
Q Consensus       129 ----~~----~--------~~~v~~~~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~  190 (249)
                          ++    |        +++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++++++|+.+++.+++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                32    2        66899999999999999999999999753  457788999999999999999999999999


Q ss_pred             chhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCc-ccchhhHHHHHhhhhc
Q 025705          191 FPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL-MGYSGSKLAQVKLETK  248 (249)
Q Consensus       191 l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~asKaal~~l~~~  248 (249)
                      +|+|++  .|+||++||.++..+.               ++. ..|++||+|+++|+|.
T Consensus       164 ~~~m~~--~g~iv~isS~~~~~~~---------------~~~~~~Y~asKaa~~~~~~~  205 (297)
T 1d7o_A          164 LPIMNP--GGASISLTYIASERII---------------PGYGGGMSSAKAALESDTRV  205 (297)
T ss_dssp             GGGEEE--EEEEEEEECGGGTSCC---------------TTCTTTHHHHHHHHHHHHHH
T ss_pred             HHHhcc--CceEEEEeccccccCC---------------CCcchHHHHHHHHHHHHHHH
Confidence            999976  3899999999988776               666 6899999999999874

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.95  E-value=1.8e-27  Score=210.94  Aligned_cols=165  Identities=12%  Similarity=0.007  Sum_probs=136.3

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCEEEEEEcChHH------------HHHHHHHHHHhhcCCCCCCceEEEEcc
Q 025705           63 VNDLTCIVTGSTSGIGRE--IARQLAESGAHVVMAVRNLKA------------ANELIQKWQEEWSGKGLPLNIEAMELD  128 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~--ia~~l~~~G~~Vil~~r~~~~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D  128 (249)
                      ..||++|||||++|||++  +|+.|+++|++|++++|+.+.            .+...+.+.+ .     +.++..+.+|
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----g~~~~~~~~D  131 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK-K-----GLVAKNFIED  131 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH-T-----TCCEEEEESC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH-c-----CCcEEEEEee
Confidence            678999999999999999  999999999999999997543            1222222222 1     2468899999


Q ss_pred             CCCHHHHHHHHHHHhccCCCccEEEeccccC-------------CCCCC---------------------CCCCHHHHHH
Q 025705          129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIF-------------SIGEP---------------------QKFSKDGYEE  174 (249)
Q Consensus       129 ~~~~~~v~~~~~~~~~~~g~id~linnag~~-------------~~~~~---------------------~~~~~~~~~~  174 (249)
                      ++|.++++++++++.+.+|+||+||||||..             ...++                     .+.+.++|++
T Consensus       132 vtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~  211 (418)
T 4eue_A          132 AFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEE  211 (418)
T ss_dssp             TTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHH
Confidence            9999999999999999999999999999974             22233                     3568999999


Q ss_pred             HHHhhhhHHH-HHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCc--ccchhhHHHHHhhhhc
Q 025705          175 HMQVNHLAPA-LLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL--MGYSGSKLAQVKLETK  248 (249)
Q Consensus       175 ~~~vN~~~~~-~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~asKaal~~l~~~  248 (249)
                      ++++|..+.+ .+++.+++.+...+.|+||++||+.+..+.               |.+  +.|++||+|+++|+|.
T Consensus       212 ~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~---------------p~~~~~aY~ASKaAL~~ltrs  273 (418)
T 4eue_A          212 TRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY---------------KIYREGTIGIAKKDLEDKAKL  273 (418)
T ss_dssp             HHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT---------------TTTTTSHHHHHHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC---------------CccccHHHHHHHHHHHHHHHH
Confidence            9999999988 778887765544456899999999988877               777  9999999999999974

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.95  E-value=4.8e-28  Score=208.60  Aligned_cols=166  Identities=17%  Similarity=0.191  Sum_probs=113.6

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEEcCh-----------HHHHH-----------HHHHHHHhhcCCC
Q 025705           62 PVNDLTCIVTGS--TSGIGREIARQLAESGAHVVMAVRNL-----------KAANE-----------LIQKWQEEWSGKG  117 (249)
Q Consensus        62 ~~~~~~vlItGa--s~gIG~~ia~~l~~~G~~Vil~~r~~-----------~~~~~-----------~~~~~~~~~~~~~  117 (249)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|++           +++++           +.+++.+    .+
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~   81 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAE----KP   81 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC---------------------------------
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhh----cc
Confidence            478999999999  89999999999999999999998753           12211           1222211    10


Q ss_pred             CC-CceEEEEcc------------CCC--------HHHHHHHHHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHH
Q 025705          118 LP-LNIEAMELD------------LLS--------LDSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEE  174 (249)
Q Consensus       118 ~~-~~v~~~~~D------------~~~--------~~~v~~~~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~  174 (249)
                      .. ....++.+|            ++|        .++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~  161 (319)
T 2ptg_A           82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA  161 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred             ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence            00 002333333            333        45889999999999999999999999763  46778899999999


Q ss_pred             HHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCc-ccchhhHHHHHhhhhc
Q 025705          175 HMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSL-MGYSGSKLAQVKLETK  248 (249)
Q Consensus       175 ~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~asKaal~~l~~~  248 (249)
                      ++++|+.++++++++++|+|+++  |+||++||.++..+.               ++. ..|++||+|+++|+|.
T Consensus       162 ~~~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~---------------~~~~~~Y~asKaal~~l~~~  219 (319)
T 2ptg_A          162 AVSSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVI---------------PGYGGGMSSAKAALESDCRT  219 (319)
T ss_dssp             HHHHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC---------------------------------THHHHHH
T ss_pred             HHhHhhHHHHHHHHHHHHHHhcC--ceEEEEecccccccc---------------CccchhhHHHHHHHHHHHHH
Confidence            99999999999999999999763  899999999988776               666 6899999999999874

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.94  E-value=2.7e-26  Score=229.72  Aligned_cols=165  Identities=23%  Similarity=0.208  Sum_probs=146.0

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSG-IGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~g-IG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+.+...  +.++.++.+|++|.+++++++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~--g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAK--GSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcC--CCeEEEEEecCCCHHHHHHHH
Confidence            578999999999998 9999999999999999998 578888888888876655432  247899999999999999999


Q ss_pred             HHHhcc-----CC-CccEEEeccccCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHh--chhhhcCCCCeEEEEcCC
Q 025705          140 EAWNGR-----LG-PLHVLINNAGIFSIG-EPQKFS--KDGYEEHMQVNHLAPALLSILL--FPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       140 ~~~~~~-----~g-~id~linnag~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--l~~m~~~~~g~Iv~vsS~  208 (249)
                      +++.+.     +| ++|+||||||+...+ ++.+.+  .++|++++++|+.+++.+++.+  +|.|++++.|+||++||.
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            999988     66 999999999998776 788888  8999999999999999999998  899988777999999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhh
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL  245 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l  245 (249)
                      .+..+                 +...|++||+|+++|
T Consensus       830 ag~~g-----------------g~~aYaASKAAL~~L  849 (1887)
T 2uv8_A          830 HGTFG-----------------GDGMYSESKLSLETL  849 (1887)
T ss_dssp             TTCSS-----------------CBTTHHHHHHHGGGH
T ss_pred             HhccC-----------------CCchHHHHHHHHHHH
Confidence            87654                 446799999999998

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.94  E-value=2.1e-26  Score=208.71  Aligned_cols=158  Identities=22%  Similarity=0.274  Sum_probs=139.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChH---HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLK---AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|||||++|||+++|++|+++|+ +|++++|+..   ..++..+++.+      .+.++.++.||++|.++++++++
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~------~g~~v~~~~~Dvtd~~~v~~~~~  312 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ------LGVRVTIAACDAADREALAALLA  312 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH------TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh------cCCeEEEEEccCCCHHHHHHHHH
Confidence            49999999999999999999999999 8999999743   35555556554      22589999999999999999999


Q ss_pred             HHhccCCCccEEEeccccC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+. +++|++|||||+. ...++.+.+.+++++++++|+.+++++.+.+.+.    ..++||++||+++..+.     
T Consensus       313 ~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~-----  382 (496)
T 3mje_A          313 ELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGS-----  382 (496)
T ss_dssp             TCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTC-----
T ss_pred             HHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCC-----
Confidence            98877 7899999999997 6778899999999999999999999999987665    35799999999999998     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                +++..|+++|+++++|+++
T Consensus       383 ----------~g~~~YaAaKa~ldala~~  401 (496)
T 3mje_A          383 ----------GGQPGYAAANAYLDALAEH  401 (496)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCcHHHHHHHHHHHHHHHH
Confidence                      8999999999999999874

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=8.3e-27  Score=227.34  Aligned_cols=167  Identities=23%  Similarity=0.201  Sum_probs=144.3

Q ss_pred             CCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEE-EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSG-IGREIARQLAESGAHVVMA-VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        60 ~~~~~~~~vlItGas~g-IG~~ia~~l~~~G~~Vil~-~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ..+++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+.....  +.++.++.+|++|.+++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~--Ga~V~vV~~DVTD~esVea  548 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAK--GSTLIVVPFNQGSKQDVEA  548 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCT--TCEEEEEECCSSSTTHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcC--CCeEEEEEeCCCCHHHHHH
Confidence            34578999999999998 9999999999999999998 577777666666664433221  2578999999999999999


Q ss_pred             HHHHHhcc-----CC-CccEEEeccccCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHh--chhhhcCCCCeEEEEc
Q 025705          138 FSEAWNGR-----LG-PLHVLINNAGIFSIG-EPQKFS--KDGYEEHMQVNHLAPALLSILL--FPSLIRGSPSRIINVN  206 (249)
Q Consensus       138 ~~~~~~~~-----~g-~id~linnag~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--l~~m~~~~~g~Iv~vs  206 (249)
                      +++++.+.     +| ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++.+  +|.|++++.|+||++|
T Consensus       549 LVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          549 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            99999988     77 999999999988776 788888  8999999999999999999999  8999888779999999


Q ss_pred             CCccccCCCCccccccccccccCCCcccchhhHHHHHhh
Q 025705          207 SVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL  245 (249)
Q Consensus       207 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l  245 (249)
                      |.++..+                 +...|++||+|+++|
T Consensus       629 SiAG~~G-----------------g~saYaASKAAL~aL  650 (1688)
T 2pff_A          629 PNHGTFG-----------------GDGMYSESKLSLETL  650 (1688)
T ss_dssp             SCTTTSS-----------------CBTTHHHHHHHHTHH
T ss_pred             ChHhccC-----------------CchHHHHHHHHHHHH
Confidence            9987654                 446899999999998

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.94  E-value=3.2e-26  Score=228.82  Aligned_cols=167  Identities=20%  Similarity=0.159  Sum_probs=146.1

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEE-cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSG-IGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~g-IG~~ia~~l~~~G~~Vil~~-r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++.+++...  +.++.++.||++|.+++++++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~--G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGAR--GSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhcc--CCeEEEEEcCCCCHHHHHHHH
Confidence            478999999999999 99999999999999999985 66777777777776655332  257899999999999999999


Q ss_pred             HHHhcc---CC-CccEEEeccccCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHH--hchhhhcCCCCeEEEEcCCcc
Q 025705          140 EAWNGR---LG-PLHVLINNAGIFSIG-EPQKFS--KDGYEEHMQVNHLAPALLSIL--LFPSLIRGSPSRIINVNSVMH  210 (249)
Q Consensus       140 ~~~~~~---~g-~id~linnag~~~~~-~~~~~~--~~~~~~~~~vN~~~~~~l~~~--~l~~m~~~~~g~Iv~vsS~~~  210 (249)
                      +++.+.   +| +||+||||||+...+ ++.+.+  .++|++++++|+.+++.+++.  ++|.|++++.|+||++||.++
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence            999998   88 999999999998776 788888  899999999999999999987  788998877789999999987


Q ss_pred             ccCCCCccccccccccccCCCcccchhhHHHHHhhhh
Q 025705          211 YVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+                 +...|++||+|+++|++
T Consensus       807 ~~g-----------------g~~aYaASKAAL~aLt~  826 (1878)
T 2uv9_A          807 TFG-----------------NDGLYSESKLALETLFN  826 (1878)
T ss_dssp             SSS-----------------CCSSHHHHHHHHTTHHH
T ss_pred             ccC-----------------CchHHHHHHHHHHHHHH
Confidence            754                 34679999999999975

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.94  E-value=5.2e-26  Score=182.96  Aligned_cols=137  Identities=14%  Similarity=0.180  Sum_probs=124.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||++|||++++++|+ +|++|++++|+.+                       .+.+|++|+++++++++++    
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------------~~~~D~~~~~~~~~~~~~~----   56 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------------DVTVDITNIDSIKKMYEQV----   56 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------------SEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------------ceeeecCCHHHHHHHHHHh----
Confidence            79999999999999999999 9999999999853                       3579999999999998875    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      +++|++|||||.....++.+.+.+++++.+++|+.+++.+++++.|.|.+.  |+||++||..+..+.            
T Consensus        57 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~------------  122 (202)
T 3d7l_A           57 GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPI------------  122 (202)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTSCC------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcCCC------------
Confidence            789999999998777778888999999999999999999999999998653  899999999887776            


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         ++...|++||+++++|++.
T Consensus       123 ---~~~~~Y~~sK~~~~~~~~~  141 (202)
T 3d7l_A          123 ---VQGASAAMANGAVTAFAKS  141 (202)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHH
T ss_pred             ---CccHHHHHHHHHHHHHHHH
Confidence               7888999999999999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=3.2e-26  Score=218.37  Aligned_cols=158  Identities=20%  Similarity=0.296  Sum_probs=143.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHH-HcCC-EEEEEEcC---hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLA-ESGA-HVVMAVRN---LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~-~~G~-~Vil~~r~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ..+++++||||++|||+++|++|+ ++|+ +|++++|+   .+.+++..+++.+.      +.++.++.||++|.+++++
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~------G~~v~~~~~Dvsd~~~v~~  601 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY------GAEVSLQACDVADRETLAK  601 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT------TCEEEEEECCTTCHHHHHH
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc------CCcEEEEEeecCCHHHHHH
Confidence            368999999999999999999999 7999 69999999   44566677776552      3589999999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++++.+.+ +||++|||||+....++.+++.++|++.+++|+.|++++++++.|.|      +||++||+++..+.   
T Consensus       602 ~~~~~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~---  671 (795)
T 3slk_A          602 VLASIPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGS---  671 (795)
T ss_dssp             HHHTSCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTC---
T ss_pred             HHHHHHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCC---
Confidence            999998876 89999999999988899999999999999999999999999998887      89999999999998   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++++.|++||+++++|+++
T Consensus       672 ------------~g~~~YaAaka~~~alA~~  690 (795)
T 3slk_A          672 ------------GGQGNYAAANSFLDALAQQ  690 (795)
T ss_dssp             ------------SSCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCHHHHHHHHHHHHHHHH
Confidence                        8999999999999999874

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.93  E-value=3.7e-26  Score=184.31  Aligned_cols=147  Identities=22%  Similarity=0.276  Sum_probs=125.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||++++++|+++  +|++++|+++++++..+++.          . .++.+|++|++++++++++    
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----------~-~~~~~D~~~~~~~~~~~~~----   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----------A-RALPADLADELEAKALLEE----   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----------C-EECCCCTTSHHHHHHHHHH----
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----------C-cEEEeeCCCHHHHHHHHHh----
Confidence            57999999999999999999998  99999999887766554431          1 6788999999999999887    


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      ++++|++|||||.....++.+.+.+++++.+++|+.+++.+++++    .+++.|+||++||..++.+.           
T Consensus        64 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~-----------  128 (207)
T 2yut_A           64 AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQV-----------  128 (207)
T ss_dssp             HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSS-----------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCC-----------
Confidence            579999999999887777888899999999999999999999998    33445899999999988776           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ++...|++||+++++|++.
T Consensus       129 ----~~~~~Y~~sK~a~~~~~~~  147 (207)
T 2yut_A          129 ----PGFAAYAAAKGALEAYLEA  147 (207)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHH
T ss_pred             ----CCcchHHHHHHHHHHHHHH
Confidence                7889999999999999874

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.93  E-value=1.9e-26  Score=192.23  Aligned_cols=154  Identities=16%  Similarity=0.156  Sum_probs=119.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||++|||+++|++|+++|++|++++|+.++++.                  . +.+|++|.++++++++++   
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------------~-~~~Dl~~~~~v~~~~~~~---   59 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------------D-LSTAEGRKQAIADVLAKC---   59 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------------C-TTSHHHHHHHHHHHHTTC---
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------------c-cccCCCCHHHHHHHHHHh---
Confidence            689999999999999999999999999999998654210                  1 568999999998887642   


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc---
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV---  222 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~---  222 (249)
                      .+++|+||||||+...       .+.+++++++|+.+++.++++++|+|++++.|+||++||.+++.+....++...   
T Consensus        60 ~~~id~lv~~Ag~~~~-------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  132 (257)
T 1fjh_A           60 SKGMDGLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             TTCCSEEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CCCCCEEEECCCCCCC-------cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhc
Confidence            3789999999997541       123899999999999999999999999888899999999988743211000000   


Q ss_pred             -cc---------ccccCCCcccchhhHHHHHhhhhc
Q 025705          223 -VS---------GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 -~~---------~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       .+         ...+.++...|++||+|+++|++.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  168 (257)
T 1fjh_A          133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRK  168 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHH
Confidence             00         001224678899999999999874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=7.3e-25  Score=198.72  Aligned_cols=160  Identities=23%  Similarity=0.260  Sum_probs=139.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChH---HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLK---AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..+++++||||++|||+++|++|+++|+ +|++++|+..   .+++..+++.+.      +.++.++.||++|.++++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~------g~~v~~~~~Dv~d~~~v~~~  297 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL------GARTTVAACDVTDRESVREL  297 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc------CCEEEEEEeCCCCHHHHHHH
Confidence            3579999999999999999999999999 5999999875   345555555541      24789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++ +.++++|++|||||+...+.+.+.+.+++++++++|+.|++++.+++.+    .+.++||++||+++..+.    
T Consensus       298 ~~~i-~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~----  368 (486)
T 2fr1_A          298 LGGI-GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGA----  368 (486)
T ss_dssp             HHTS-CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCC----
T ss_pred             HHHH-HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCC----
Confidence            9998 5568999999999998878888999999999999999999999998754    356899999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +++..|+++|+++++|+++
T Consensus       369 -----------~g~~~Yaaaka~l~~la~~  387 (486)
T 2fr1_A          369 -----------PGLGGYAPGNAYLDGLAQQ  387 (486)
T ss_dssp             -----------TTCTTTHHHHHHHHHHHHH
T ss_pred             -----------CCCHHHHHHHHHHHHHHHH
Confidence                       8889999999999998763

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=5e-24  Score=194.15  Aligned_cols=157  Identities=22%  Similarity=0.262  Sum_probs=135.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChH---HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLK---AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..+++++||||++|||+++|++|+++|+ +|++++|+..   .+++..+++.+      .+.++.++.||++|.++++++
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~------~g~~v~~~~~Dvtd~~~v~~~  330 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG------HGCEVVHAACDVAERDALAAL  330 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT------TTCEEEEEECCSSCHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh------cCCEEEEEEeCCCCHHHHHHH
Confidence            3579999999999999999999999999 6999999874   34555555543      125789999999999999998


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++     +++|++|||||+.....+.+.+.+++++++++|+.+++++.+.+.+..   +.++||++||+++..+.    
T Consensus       331 ~~~-----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~~~~~V~~SS~a~~~g~----  398 (511)
T 2z5l_A          331 VTA-----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---GLDAFVLFSSVTGTWGN----  398 (511)
T ss_dssp             HHH-----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---TCCCEEEEEEGGGTTCC----
T ss_pred             Hhc-----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCEEEEEeCHHhcCCC----
Confidence            887     689999999999887788889999999999999999999999875431   45799999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +++..|+++|+++++|+++
T Consensus       399 -----------~g~~~YaaaKa~ld~la~~  417 (511)
T 2z5l_A          399 -----------AGQGAYAAANAALDALAER  417 (511)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCHHHHHHHHHHHHHHHH
Confidence                       8899999999999999863

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.91  E-value=2.1e-24  Score=224.89  Aligned_cols=160  Identities=16%  Similarity=0.179  Sum_probs=126.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHH---HHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAA---NELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+|+++||||++|||+++|++|+++|++ |++++|+..+.   ++..+++.+.      +.++.++.||++|.+++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~------g~~v~~~~~Dvsd~~~v~~~~ 1956 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ------GVQVLVSTSNASSLDGARSLI 1956 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT------TCEEEEECCCSSSHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC------CCEEEEEecCCCCHHHHHHHH
Confidence            6899999999999999999999999996 88889986543   3334444331      257889999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+ +|+||+||||||+....++.+++.++|++.+++|+.|++++.+++.+.|.+.  |+||++||+++..+.     
T Consensus      1957 ~~~~~-~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~----- 2028 (2512)
T 2vz8_A         1957 TEATQ-LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGN----- 2028 (2512)
T ss_dssp             HHHHH-HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTC-----
T ss_pred             HHHHh-cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCC-----
Confidence            99874 7899999999999877888999999999999999999999999999988664  799999999999988     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhh
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                                +++..|++||+|+++|+|
T Consensus      2029 ----------~g~~~Y~aaKaal~~l~~ 2046 (2512)
T 2vz8_A         2029 ----------AGQANYGFANSAMERICE 2046 (2512)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHH
T ss_pred             ----------CCcHHHHHHHHHHHHHHH
Confidence                      899999999999999998

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.89  E-value=2.1e-23  Score=175.09  Aligned_cols=147  Identities=19%  Similarity=0.104  Sum_probs=119.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++|+++||||+||||++++++|+++|++|++++|++.+.+               ..++.++.+|++|.++++++++   
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~---   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------------GPNEECVQCDLADANAVNAMVA---   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------------CTTEEEEECCTTCHHHHHHHHT---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------------CCCCEEEEcCCCCHHHHHHHHc---
Confidence            4689999999999999999999999999999999875432               1478999999999999988776   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|+||||||..        +.+.+++++++|+.+++.+++++.    +.+.++||++||..++.......   ..
T Consensus        64 ----~~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~g~~~~~~---~~  124 (267)
T 3rft_A           64 ----GCDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAAR----AHGQPRIVFASSNHTIGYYPQTE---RL  124 (267)
T ss_dssp             ----TCSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEEEEGGGGTTSBTTS---CB
T ss_pred             ----CCCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcchHHhCCCCCCC---CC
Confidence                689999999983        335678999999999999999983    34568999999998875432221   22


Q ss_pred             cccccCCCcccchhhHHHHHhhhh
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ++..+.++...|++||++++.+++
T Consensus       125 ~e~~~~~~~~~Y~~sK~~~e~~~~  148 (267)
T 3rft_A          125 GPDVPARPDGLYGVSKCFGENLAR  148 (267)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHH
Confidence            334455777889999999999986

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.89  E-value=1.2e-22  Score=211.79  Aligned_cols=168  Identities=17%  Similarity=0.161  Sum_probs=128.2

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSG-IGREIARQLAESGAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~g-IG~~ia~~l~~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+.+. ..+..+++.+++...  +.++..+.+|++|.+++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHH
Confidence            378999999999999 9999999999999999999998765 222234444443332  257889999999999999999


Q ss_pred             HHHhc----cCCCccEEEecccc----CCC-CCCCCCCHHHHH----HHHHhhhhHHHHHHHHhchhhhcCCCC----eE
Q 025705          140 EAWNG----RLGPLHVLINNAGI----FSI-GEPQKFSKDGYE----EHMQVNHLAPALLSILLFPSLIRGSPS----RI  202 (249)
Q Consensus       140 ~~~~~----~~g~id~linnag~----~~~-~~~~~~~~~~~~----~~~~vN~~~~~~l~~~~l~~m~~~~~g----~I  202 (249)
                      +++.+    .+|++|+||||||+    ... ....+.+.++|+    ..+++|+.+++.+++.+.+.|.+++.+    .|
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            99998    89999999999997    211 223333444444    449999999999999999999876543    23


Q ss_pred             EEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          203 INVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       203 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +++|+..+..                 ++...|++||+|+++|+|.
T Consensus      2291 ~~~ss~~g~~-----------------g~~~aYsASKaAl~~Ltrs 2319 (3089)
T 3zen_D         2291 LPGSPNRGMF-----------------GGDGAYGEAKSALDALENR 2319 (3089)
T ss_dssp             EEECSSTTSC-----------------SSCSSHHHHGGGHHHHHHH
T ss_pred             EECCcccccC-----------------CCchHHHHHHHHHHHHHHH
Confidence            3333332221                 4556899999999999974

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.89  E-value=3e-23  Score=172.03  Aligned_cols=154  Identities=22%  Similarity=0.163  Sum_probs=119.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++||||+||||++++++|+++|++|++++|+.++++                 .  .+.+|+++.++++++++++   
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~--~~~~D~~~~~~~~~~~~~~---   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------------A--DLSTPGGRETAVAAVLDRC---   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------------C--CTTSHHHHHHHHHHHHHHH---
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------------c--cccCCcccHHHHHHHHHHc---
Confidence            57999999999999999999999999999999865321                 0  1568999999999988865   


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc---
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV---  222 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~---  222 (249)
                      .+++|++|||||....       .+.+++.+++|+.+++.+++++++.|++++.++||++||..++.+.....+...   
T Consensus        60 ~~~~d~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  132 (255)
T 2dkn_A           60 GGVLDGLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAML  132 (255)
T ss_dssp             TTCCSEEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHH
T ss_pred             CCCccEEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhc
Confidence            3689999999997531       234889999999999999999999999887799999999988765411110000   


Q ss_pred             -ccc-------cccCCCcccchhhHHHHHhhhhc
Q 025705          223 -VSG-------RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 -~~~-------~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       .++       ....++...|++||++++++++.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  166 (255)
T 2dkn_A          133 AGDEARAIELAEQQGQTHLAYAGSKYAVTCLARR  166 (255)
T ss_dssp             HTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhccccCCcchhHHHHHHHHHHHHHH
Confidence             000       00114667899999999998874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.86  E-value=2.2e-21  Score=159.59  Aligned_cols=147  Identities=16%  Similarity=0.121  Sum_probs=111.3

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCce-EEEEccCCCHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI-EAMELDLLSLDSV  135 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~v  135 (249)
                      +.+..+++|++++||||+|+||++++++|+++|++|++++|+++++++..    .        ..+ .++.+|++     
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~--------~~~~~~~~~Dl~-----   75 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----E--------RGASDIVVANLE-----   75 (236)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----H--------TTCSEEEECCTT-----
T ss_pred             cccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----h--------CCCceEEEcccH-----
Confidence            34456789999999999999999999999999999999999988765442    2        256 88999998     


Q ss_pred             HHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          136 VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       136 ~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                          +.+.+.++++|++|||||...        .+++++.+++|+.++..+++++.    +.+.++||++||..+..+..
T Consensus        76 ----~~~~~~~~~~D~vi~~ag~~~--------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~  139 (236)
T 3e8x_A           76 ----EDFSHAFASIDAVVFAAGSGP--------HTGADKTILIDLWGAIKTIQEAE----KRGIKRFIMVSSVGTVDPDQ  139 (236)
T ss_dssp             ----SCCGGGGTTCSEEEECCCCCT--------TSCHHHHHHTTTHHHHHHHHHHH----HHTCCEEEEECCTTCSCGGG
T ss_pred             ----HHHHHHHcCCCEEEECCCCCC--------CCCccccchhhHHHHHHHHHHHH----HcCCCEEEEEecCCCCCCCC
Confidence                334445668999999999753        24688999999999999999873    33567999999966554320


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ..++...|+++|++++.+.+.
T Consensus       140 ------------~~~~~~~Y~~sK~~~e~~~~~  160 (236)
T 3e8x_A          140 ------------GPMNMRHYLVAKRLADDELKR  160 (236)
T ss_dssp             ------------SCGGGHHHHHHHHHHHHHHHH
T ss_pred             ------------ChhhhhhHHHHHHHHHHHHHH
Confidence                        004677899999999998763

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.85  E-value=1.4e-20  Score=162.60  Aligned_cols=163  Identities=21%  Similarity=0.173  Sum_probs=124.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+++++||||+|+||++++++|+++|++|++++|+.+...+..+++.+...     .++.++.+|++|.+++++++++  
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~--   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG-----KTPAFHETDVSDERALARIFDA--   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHS-----CCCEEECCCTTCHHHHHHHHHH--
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcC-----CCceEEEeecCCHHHHHHHHhc--
Confidence            457999999999999999999999999999999987766666666554322     3678899999999999998876  


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                         +++|++|||||......    ..+..++.+++|+.++..+++++    ++.+.++||++||.+.+... ...   ..
T Consensus        77 ---~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~-~~~---~~  141 (341)
T 3enk_A           77 ---HPITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVP-ERS---PI  141 (341)
T ss_dssp             ---SCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSC-SSS---SB
T ss_pred             ---cCCcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCC-CCC---CC
Confidence               47999999999753221    23445678899999998887764    55566799999997765332 111   12


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+..+...|+.||++.+.++++
T Consensus       142 ~e~~~~~~~~~Y~~sK~~~e~~~~~  166 (341)
T 3enk_A          142 DETFPLSATNPYGQTKLMAEQILRD  166 (341)
T ss_dssp             CTTSCCBCSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHH
Confidence            3334445678899999999998864

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.84  E-value=7.7e-21  Score=163.89  Aligned_cols=161  Identities=11%  Similarity=0.143  Sum_probs=120.4

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +.++.++++++++||||+|+||++++++|+++|++|++++|+.....+..++         . .++.++.+|++|.++++
T Consensus        12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l-~~v~~~~~Dl~d~~~~~   81 (330)
T 2pzm_A           12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------V-AGLSVIEGSVTDAGLLE   81 (330)
T ss_dssp             --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------C-TTEEEEECCTTCHHHHH
T ss_pred             cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------c-CCceEEEeeCCCHHHHH
Confidence            3456678899999999999999999999999999999999975432211100         0 25788999999999999


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++++++     ++|++|||||.....     +.++++  +++|+.++..+++++..    .+.++||++||.+++.....
T Consensus        82 ~~~~~~-----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~  145 (330)
T 2pzm_A           82 RAFDSF-----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPAT  145 (330)
T ss_dssp             HHHHHH-----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSS
T ss_pred             HHHhhc-----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCcc
Confidence            988865     699999999975432     345555  99999999999999863    34579999999877543211


Q ss_pred             cc-ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TE-DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~-~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+ ++++   ..  .+...|++||++++.+++.
T Consensus       146 ~~~~~~E---~~--~~~~~Y~~sK~~~e~~~~~  173 (330)
T 2pzm_A          146 VPIPIDS---PT--APFTSYGISKTAGEAFLMM  173 (330)
T ss_dssp             SSBCTTC---CC--CCCSHHHHHHHHHHHHHHT
T ss_pred             CCCCcCC---CC--CCCChHHHHHHHHHHHHHH
Confidence            00 1111   11  3567899999999999875

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.83  E-value=2.8e-20  Score=160.48  Aligned_cols=163  Identities=15%  Similarity=0.093  Sum_probs=121.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++++||||+|+||.+++++|+++|++|++++|+.+..+.  +.+.....    ..++.++.+|++|.+++.++++.+ 
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~-   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGI----ENDVKIIHMDLLEFSNIIRTIEKV-   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTC----TTTEEECCCCTTCHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccc----cCceeEEECCCCCHHHHHHHHHhc-
Confidence            57899999999999999999999999999999998754321  12222111    136788899999999999988876 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++|||||...    .+.+.++++..+++|+.++..+++++...   ...++||++||.+.+..... .   ..
T Consensus        75 ----~~d~vih~A~~~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~-~---~~  139 (345)
T 2z1m_A           75 ----QPDEVYNLAAQSF----VGVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQE-I---PQ  139 (345)
T ss_dssp             ----CCSEEEECCCCCC----HHHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSS-S---SB
T ss_pred             ----CCCEEEECCCCcc----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCC-C---CC
Confidence                6999999999742    12234568899999999999999998753   11379999999876543211 1   12


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+.++...|++||++.+.+++.
T Consensus       140 ~e~~~~~~~~~Y~~sK~~~e~~~~~  164 (345)
T 2z1m_A          140 TEKTPFYPRSPYAVAKLFGHWITVN  164 (345)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCCChhHHHHHHHHHHHHH
Confidence            2334446678899999999998764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.83  E-value=5e-21  Score=157.70  Aligned_cols=139  Identities=17%  Similarity=0.091  Sum_probs=110.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +.+++++||||+||||++++++|+++|+  +|++++|+++++++..    .        .++.++.+|++|.++++++++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~--------~~~~~~~~D~~d~~~~~~~~~   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----Y--------KNVNQEVVDFEKLDDYASAFQ   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----G--------GGCEEEECCGGGGGGGGGGGS
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----c--------CCceEEecCcCCHHHHHHHhc
Confidence            3568999999999999999999999999  9999999876542211    0        257788999999988766543


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                             ++|++|||||....       .+.+++.+++|+.++..+++++    .+.+.++||++||..++.+       
T Consensus        84 -------~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~-------  138 (242)
T 2bka_A           84 -------GHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS-------  138 (242)
T ss_dssp             -------SCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT-------
T ss_pred             -------CCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC-------
Confidence                   69999999996421       2456889999999999888874    4455679999999876532       


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                +...|+++|++++.+++.
T Consensus       139 ----------~~~~Y~~sK~~~e~~~~~  156 (242)
T 2bka_A          139 ----------SNFLYLQVKGEVEAKVEE  156 (242)
T ss_dssp             ----------CSSHHHHHHHHHHHHHHT
T ss_pred             ----------CcchHHHHHHHHHHHHHh
Confidence                      345799999999999875

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.82  E-value=1.1e-19  Score=157.94  Aligned_cols=146  Identities=16%  Similarity=0.232  Sum_probs=117.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-CC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAES-GA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~-G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+++++++||||+|+||++++++|+++ |+ +|++++|++.+.++..+++..        .++.++.+|++|.+++.+++
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~--------~~v~~~~~Dl~d~~~l~~~~   89 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND--------PRMRFFIGDVRDLERLNYAL   89 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC--------TTEEEEECCTTCHHHHHHHT
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC--------CCEEEEECCCCCHHHHHHHH
Confidence            467899999999999999999999999 98 999999998776665544321        36889999999999887765


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +       ++|++|||||....    .......++.+++|+.++.++++++.+.    +.++||++||..+.        
T Consensus        90 ~-------~~D~Vih~Aa~~~~----~~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~--------  146 (344)
T 2gn4_A           90 E-------GVDICIHAAALKHV----PIAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAA--------  146 (344)
T ss_dssp             T-------TCSEEEECCCCCCH----HHHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGS--------
T ss_pred             h-------cCCEEEECCCCCCC----CchhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccC--------
Confidence            4       68999999997531    1122345688999999999999998765    45799999997543        


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                .+...|++||++.+.+++.
T Consensus       147 ----------~p~~~Y~~sK~~~E~~~~~  165 (344)
T 2gn4_A          147 ----------NPINLYGATKLCSDKLFVS  165 (344)
T ss_dssp             ----------SCCSHHHHHHHHHHHHHHH
T ss_pred             ----------CCccHHHHHHHHHHHHHHH
Confidence                      3456899999999998763

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.82  E-value=1.5e-19  Score=157.85  Aligned_cols=168  Identities=15%  Similarity=0.062  Sum_probs=118.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH-HHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN-ELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +++++||||+|+||.+++++|+++|++|++++|+.+... +..+++.+....  ...++.++.+|++|.+++.++++.. 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDTSNLTRILREV-   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhcccc--CCCceEEEECCCCCHHHHHHHHHhc-
Confidence            368999999999999999999999999999999865421 111222111000  0136788899999999999988875 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++|||||....    ..+.++++..+++|+.++..+++++.+.+.+ +.++||++||.+.+.+.. ..   ..
T Consensus        78 ----~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~-~~---~~  144 (372)
T 1db3_A           78 ----QPDEVYNLGAMSHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQ-EI---PQ  144 (372)
T ss_dssp             ----CCSEEEECCCCCTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCC-SS---SB
T ss_pred             ----CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCC-CC---CC
Confidence                68999999997532    2344567889999999999999999877654 247999999987654331 11   12


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+..+...|+.||++.+.++++
T Consensus       145 ~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (372)
T 1db3_A          145 KETTPFYPRSPYAVAKLYAYWITVN  169 (372)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCCChHHHHHHHHHHHHHH
Confidence            2333445677899999999998764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.82  E-value=9.7e-20  Score=156.93  Aligned_cols=165  Identities=17%  Similarity=0.112  Sum_probs=120.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEE-EccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM-ELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~v~~~~~  140 (249)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.++.+...+.+.....     .++.++ .+|++|.++++++++
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-----GRFETAVVEDMLKQGAYDEVIK   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-----TTEEEEECSCTTSTTTTTTTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC-----CceEEEEecCCcChHHHHHHHc
Confidence            46789999999999999999999999999999999998876665554433211     257777 799999887766543


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc---
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT---  217 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~---  217 (249)
                             ++|++|||||.....       +++++.+++|+.++..+++++.+.   .+.++||++||.+++......   
T Consensus        83 -------~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~  145 (342)
T 1y1p_A           83 -------GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             -------TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCC
T ss_pred             -------CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCC
Confidence                   699999999975421       246779999999999999998652   345799999998776432110   


Q ss_pred             cccccccc-------------cccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSG-------------RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~-------------~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+++...             ..+..+...|++||++.+.+++.
T Consensus       146 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  189 (342)
T 1y1p_A          146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWK  189 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHH
Confidence            01111100             00123457899999999998763

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.82  E-value=3.5e-19  Score=153.87  Aligned_cols=164  Identities=16%  Similarity=0.074  Sum_probs=120.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++|||||+|+||.+++++|+++|++|++++|+. ....+..+.+..    .   .++.++.+|++|.++++++++..  
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~----~---~~~~~~~~Dl~d~~~~~~~~~~~--   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----L---GNFEFVHGDIRNKNDVTRLITKY--   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----T---CCCEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc----C---CceEEEEcCCCCHHHHHHHHhcc--
Confidence            5799999999999999999999999999999853 222233333332    1   25788999999999999888762  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc------
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE------  218 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~------  218 (249)
                         ++|++|||||....    +.+.++++..+++|+.++..+++++.+.+.+   ++||++||.+.+.+....+      
T Consensus        73 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~---~~iv~~SS~~v~g~~~~~~~~e~~~  142 (347)
T 1orr_A           73 ---MPDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN---CNIIYSSTNKVYGDLEQYKYNETET  142 (347)
T ss_dssp             ---CCSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT---CEEEEEEEGGGGTTCTTSCEEECSS
T ss_pred             ---CCCEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC---ceEEEeccHHHhCCCCcCCcccccc
Confidence               69999999996421    2234577889999999999999999887642   6999999987654321110      


Q ss_pred             ------ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 ------DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ------~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            .....++..+.++...|++||++.+.++++
T Consensus       143 ~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~  178 (347)
T 1orr_A          143 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD  178 (347)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccCccccCCCCCCCchHHHHHHHHHHHHH
Confidence                  000122233445678899999999998764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.82  E-value=1.3e-19  Score=157.58  Aligned_cols=164  Identities=15%  Similarity=0.040  Sum_probs=123.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++++++||||+|+||.+++++|+++|++|++++|+.++.....+.+..       ..++.++.+|++|.+++.++++..
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV-------ADGMQSEIGDIRDQNKLLESIREF   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT-------TTTSEEEECCTTCHHHHHHHHHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc-------CCceEEEEccccCHHHHHHHHHhc
Confidence            4578999999999999999999999999999999987654433332210       136788999999999999988875


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                           ++|++|||||..    ..+.+.++++..+++|+.++..+++++.+.   .+.++||++||...+.+.....   .
T Consensus        80 -----~~d~vih~A~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~---~  144 (357)
T 1rkx_A           80 -----QPEIVFHMAAQP----LVRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIW---G  144 (357)
T ss_dssp             -----CCSEEEECCSCC----CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSS---C
T ss_pred             -----CCCEEEECCCCc----ccccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCC---C
Confidence                 699999999963    122345678899999999999999998663   2247999999987654321100   1


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+..+...|+.||++.+.+++.
T Consensus       145 ~~E~~~~~~~~~Y~~sK~~~e~~~~~  170 (357)
T 1rkx_A          145 YRENEAMGGYDPYSNSKGCAELVTSS  170 (357)
T ss_dssp             BCTTSCBCCSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHH
Confidence            12222345677899999999998764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.81  E-value=1.5e-19  Score=154.85  Aligned_cols=155  Identities=19%  Similarity=0.184  Sum_probs=118.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +.+++|||||+|+||.+++++|+++|++|++++|+... +.    +           ++.++.+|++|.+++.++++.  
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----------~~~~~~~Dl~d~~~~~~~~~~--   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----------NVEMISLDIMDSQRVKKVISD--   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----------TEEEEECCTTCHHHHHHHHHH--
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----------eeeEEECCCCCHHHHHHHHHh--
Confidence            45889999999999999999999999999999998653 11    0           467889999999999988876  


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                         +++|++|||||....    +.+.+++++.+++|+.++..+++++ +.+.  +.++||++||.+.+.+..  ++....
T Consensus        73 ---~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~g~~~--~~~~~~  140 (321)
T 2pk3_A           73 ---IKPDYIFHLAAKSSV----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEYGMIL--PEESPV  140 (321)
T ss_dssp             ---HCCSEEEECCSCCCH----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGTBSCC--GGGCSB
T ss_pred             ---cCCCEEEEcCcccch----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhcCCCC--CCCCCC
Confidence               379999999997532    1233467899999999999999998 5552  357999999987654321  011112


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+.++...|++||++.+.+++.
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (321)
T 2pk3_A          141 SEENQLRPMSPYGVSKASVGMLARQ  165 (321)
T ss_dssp             CTTSCCBCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHH
Confidence            3333446678999999999998764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.81  E-value=3.9e-19  Score=154.24  Aligned_cols=166  Identities=9%  Similarity=-0.040  Sum_probs=124.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHH-HcCCEEEEEEcChHH------------HHHHHHHHHHhhcCCCCCCceEEEEcc
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLA-ESGAHVVMAVRNLKA------------ANELIQKWQEEWSGKGLPLNIEAMELD  128 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~-~~G~~Vil~~r~~~~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D  128 (249)
                      ...+|+|||||||+|||++.+..|+ +.|++++++++..+.            .....+++++.      +.+...+.||
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~------G~~a~~i~~D  120 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE------GLYSVTIDGD  120 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH------TCCEEEEESC
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc------CCCceeEeCC
Confidence            4567999999999999999999999 689999999876432            23334444442      2578999999


Q ss_pred             CCCHHHHHHHHHHHhccCCCccEEEeccccCCCCC-------------C---------------------CCCCHHHHHH
Q 025705          129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGE-------------P---------------------QKFSKDGYEE  174 (249)
Q Consensus       129 ~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~-------------~---------------------~~~~~~~~~~  174 (249)
                      +++.+.++++++++++.+|+||+||||+|......             +                     ...+.++++.
T Consensus       121 v~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~  200 (401)
T 4ggo_A          121 AFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAA  200 (401)
T ss_dssp             TTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHH
Confidence            99999999999999999999999999999753111             0                     1235566666


Q ss_pred             HHHh---hhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          175 HMQV---NHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       175 ~~~v---N~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+   ..++.+...+...+.|.+  +++++.+|++.+....+             .+....+|++|++|+..+|+
T Consensus       201 T~~vMg~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P-------------~Y~~G~mG~AKaaLEa~~r~  262 (401)
T 4ggo_A          201 TVKVMGGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQA-------------LYRKGTIGKAKEHLEATAHR  262 (401)
T ss_dssp             HHHHHSSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHH-------------HHTTSHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeec-------------CCCccHHHHHHHHHHHHHHH
Confidence            6555   445556667777777755  47999999987765541             02335799999999999875

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.81  E-value=1.7e-19  Score=146.76  Aligned_cols=136  Identities=14%  Similarity=0.104  Sum_probs=104.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHH-HcCCEEEEEEcChH-HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLA-ESGAHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~-~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      |+++||||+||||++++++|+ ++|++|++++|+++ ++++..    ..      ..++.++.+|++|.++++++++   
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~------~~~~~~~~~D~~d~~~~~~~~~---   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID------HERVTVIEGSFQNPGXLEQAVT---   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT------STTEEEEECCTTCHHHHHHHHT---
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC------CCceEEEECCCCCHHHHHHHHc---
Confidence            789999999999999999999 89999999999987 554432    10      1368899999999999888765   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++|||||..                   |+.     ++.+++.|++.+.++||++||..++.+.+...  .  
T Consensus        73 ----~~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~--~--  120 (221)
T 3r6d_A           73 ----NAEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL--E--  120 (221)
T ss_dssp             ----TCSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH--H--
T ss_pred             ----CCCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccc--c--
Confidence                689999999853                   222     88888999988888999999998776541100  0  


Q ss_pred             cccccCCCcc-cchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLM-GYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~-~Y~asKaal~~l~~~  248 (249)
                       ... .+... .|+++|.+++.+.+.
T Consensus       121 -~~~-~~~~~~~y~~~K~~~e~~~~~  144 (221)
T 3r6d_A          121 -KWT-FDNLPISYVQGERQARNVLRE  144 (221)
T ss_dssp             -HHH-HHTSCHHHHHHHHHHHHHHHH
T ss_pred             -ccc-ccccccHHHHHHHHHHHHHHh
Confidence             000 01122 799999999998874

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.80  E-value=4e-19  Score=146.63  Aligned_cols=152  Identities=15%  Similarity=0.040  Sum_probs=112.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAES--GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+++++||||+|+||++++++|+++  |++|++++|++++.++.     .        .++.++.+|++|.++++++++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----~--------~~~~~~~~D~~d~~~~~~~~~   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----G--------GEADVFIGDITDADSINPAFQ   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----T--------CCTTEEECCTTSHHHHHHHHT
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----C--------CCeeEEEecCCCHHHHHHHHc
Confidence            35689999999999999999999999  89999999997654322     1        256788999999998888764


Q ss_pred             HHhccCCCccEEEeccccCCCCCC---------CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEP---------QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~---------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                             ++|++|||||.......         .+...+.+++.+++|+.++..+++++..    .+.++||++||..+.
T Consensus        69 -------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~  137 (253)
T 1xq6_A           69 -------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGT  137 (253)
T ss_dssp             -------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTT
T ss_pred             -------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCC
Confidence                   58999999997542111         1222344567889999999998888644    345799999998765


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+   ...       .....|+.+|++++.++++
T Consensus       138 ~~~~~---~~~-------~~~~~y~~sK~~~e~~~~~  164 (253)
T 1xq6_A          138 NPDHP---LNK-------LGNGNILVWKRKAEQYLAD  164 (253)
T ss_dssp             CTTCG---GGG-------GGGCCHHHHHHHHHHHHHT
T ss_pred             CCCCc---ccc-------ccchhHHHHHHHHHHHHHh
Confidence            43210   000       1123577899999998874

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.80  E-value=2.5e-19  Score=154.78  Aligned_cols=161  Identities=14%  Similarity=0.140  Sum_probs=122.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-------CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESG-------AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD  133 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G-------~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  133 (249)
                      ..+++++++||||+|+||.+++++|+++|       ++|++++|+.+...+      .      ...++.++.+|++|.+
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~------~~~~~~~~~~Dl~d~~   77 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G------FSGAVDARAADLSAPG   77 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T------CCSEEEEEECCTTSTT
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c------cCCceeEEEcCCCCHH
Confidence            35678999999999999999999999999       899999998643211      0      1246888999999999


Q ss_pred             HHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCcccc
Q 025705          134 SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYV  212 (249)
Q Consensus       134 ~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~  212 (249)
                      +++++++      +++|++|||||...     ..+.+++++.+++|+.++..+++++.+...++ +.++||++||.+.+.
T Consensus        78 ~~~~~~~------~~~d~vih~A~~~~-----~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~  146 (342)
T 2hrz_A           78 EAEKLVE------ARPDVIFHLAAIVS-----GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFG  146 (342)
T ss_dssp             HHHHHHH------TCCSEEEECCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCC
T ss_pred             HHHHHHh------cCCCEEEECCccCc-----ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhC
Confidence            9888775      37999999999753     12456788999999999999999987754322 147999999997654


Q ss_pred             CCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          213 GFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +... .   ..++..+..+...|++||++.+.++++
T Consensus       147 ~~~~-~---~~~E~~~~~~~~~Y~~sK~~~e~~~~~  178 (342)
T 2hrz_A          147 APLP-Y---PIPDEFHTTPLTSYGTQKAICELLLSD  178 (342)
T ss_dssp             SSCC-S---SBCTTCCCCCSSHHHHHHHHHHHHHHH
T ss_pred             CCCC-C---CcCCCCCCCCcchHHHHHHHHHHHHHH
Confidence            3211 1   122333344667899999999998763

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.80  E-value=2.7e-19  Score=154.38  Aligned_cols=159  Identities=15%  Similarity=0.055  Sum_probs=113.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +...+++++++||||+|+||.+++++|+++|++|++++|+.....+.       ...  . .++.++.+|++|.++++++
T Consensus        15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------l~~--~-~~~~~~~~Dl~d~~~~~~~   84 (333)
T 2q1w_A           15 VPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH-------LKD--H-PNLTFVEGSIADHALVNQL   84 (333)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-------SCC--C-TTEEEEECCTTCHHHHHHH
T ss_pred             eeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh-------Hhh--c-CCceEEEEeCCCHHHHHHH
Confidence            34457789999999999999999999999999999999975432111       000  0 2678899999999999888


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC---CC
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG---FV  215 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~---~~  215 (249)
                      ++.     +++|++|||||.....     +.++++  +++|+.++..+++++.+    .+.++||++||...+..   ..
T Consensus        85 ~~~-----~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~  148 (333)
T 2q1w_A           85 IGD-----LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQ  148 (333)
T ss_dssp             HHH-----HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSS
T ss_pred             Hhc-----cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccC
Confidence            875     2699999999975432     334444  99999999999999865    34579999999776531   11


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .. .+   ++.. .|....|++||++.+.+++.
T Consensus       149 ~~-~~---~E~~-~p~~~~Y~~sK~~~E~~~~~  176 (333)
T 2q1w_A          149 PV-RL---DHPR-NPANSSYAISKSANEDYLEY  176 (333)
T ss_dssp             SB-CT---TSCC-CCTTCHHHHHHHHHHHHHHH
T ss_pred             CC-Cc---CCCC-CCCCCchHHHHHHHHHHHHh
Confidence            10 11   1111 23227899999999999875

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.80  E-value=1.7e-18  Score=152.51  Aligned_cols=170  Identities=17%  Similarity=0.180  Sum_probs=119.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH-HcCCEEEEEEcChHH---------HHHHHHHHHHhhcCCCCCCc---eEEEEccCCC
Q 025705           65 DLTCIVTGSTSGIGREIARQLA-ESGAHVVMAVRNLKA---------ANELIQKWQEEWSGKGLPLN---IEAMELDLLS  131 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~-~~G~~Vil~~r~~~~---------~~~~~~~~~~~~~~~~~~~~---v~~~~~D~~~  131 (249)
                      +.++|||||+|+||.+++++|+ ++|++|++++|+...         .+...+.+.+ ........+   +.++.+|++|
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQ-SDGPKPPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHH-SCSSCCTTTTCCCEEEESCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHH-hhccccccCCceEEEEECCCCC
Confidence            3579999999999999999999 999999999997644         2333222222 111000013   7889999999


Q ss_pred             HHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          132 LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       132 ~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      .+.+++++++    ++++|++|||||.....    .+.+.+++.+++|+.++..+++++.    +.+.++||++||.+.+
T Consensus        81 ~~~~~~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~iv~~SS~~v~  148 (397)
T 1gy8_A           81 EDFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAML----LHKCDKIIFSSSAAIF  148 (397)
T ss_dssp             HHHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHH----HhCCCEEEEECCHHHh
Confidence            9998887764    45699999999975321    1346678899999999999999853    3455799999997654


Q ss_pred             cCCCCc----cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDT----EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~----~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       +....    ++....++..+..+...|++||++.+.+++.
T Consensus       149 -g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~  188 (397)
T 1gy8_A          149 -GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRD  188 (397)
T ss_dssp             -BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHH
T ss_pred             -CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHH
Confidence             32210    0011123333334567899999999998764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.80  E-value=4.4e-19  Score=155.63  Aligned_cols=163  Identities=15%  Similarity=0.058  Sum_probs=122.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-----HHHHHHHHHHhhcCCCCCC-ceEEEEccCCCHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-----ANELIQKWQEEWSGKGLPL-NIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-----~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++|||||+|+||.+++++|+++|++|++++|+.+.     ++...+++..      ... ++.++.+|++|.+++.+++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~  102 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN------VNKALMKLHYADLTDASSLRRWI  102 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------------CCEEEEECCTTCHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc------ccccceEEEECCCCCHHHHHHHH
Confidence            689999999999999999999999999999998643     2211111110      012 5788999999999999988


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +.+     ++|++|||||....    +.+.++++..+++|+.++..+++++.+.+.++ +.++||++||...+.....  
T Consensus       103 ~~~-----~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~--  171 (381)
T 1n7h_A          103 DVI-----KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP--  171 (381)
T ss_dssp             HHH-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS--
T ss_pred             Hhc-----CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC--
Confidence            875     69999999997532    12346788999999999999999999987652 3469999999876544321  


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         ..++..+..+...|+.||++.+.+++.
T Consensus       172 ---~~~E~~~~~~~~~Y~~sK~~~E~~~~~  198 (381)
T 1n7h_A          172 ---PQSETTPFHPRSPYAASKCAAHWYTVN  198 (381)
T ss_dssp             ---SBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCCCCCCchHHHHHHHHHHHHH
Confidence               122333445677899999999988763

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=4.6e-19  Score=155.15  Aligned_cols=164  Identities=17%  Similarity=0.094  Sum_probs=119.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-----HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-----ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++||||+|+||.+++++|+++|++|++++|+.+.     ++...+++...     ...++.++.+|++|.+++.++++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~   99 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-----IEGNMKLHYGDLTDSTCLVKIIN   99 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC--------------CEEEEECCTTCHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-----cCCCceEEEccCCCHHHHHHHHH
Confidence            689999999999999999999999999999998543     11111110000     01367889999999999999888


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ..     ++|++|||||....    ..+.++++..+++|+.++..+++++.+.+.+ +.++||++||...+..... .  
T Consensus       100 ~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~-~--  166 (375)
T 1t2a_A          100 EV-----KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQE-I--  166 (375)
T ss_dssp             HH-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSS-S--
T ss_pred             hc-----CCCEEEECCCcccc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCC-C--
Confidence            75     68999999996431    1234667889999999999999999876542 2379999999877654321 1  


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       ..++..+..+...|+.||++.+.++++
T Consensus       167 -~~~E~~~~~~~~~Y~~sK~~~e~~~~~  193 (375)
T 1t2a_A          167 -PQKETTPFYPRSPYGAAKLYAYWIVVN  193 (375)
T ss_dssp             -SBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -CCCccCCCCCCChhHHHHHHHHHHHHH
Confidence             122233345567899999999998764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.79  E-value=6.5e-19  Score=152.45  Aligned_cols=162  Identities=19%  Similarity=0.167  Sum_probs=117.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH------HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA------ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +++++||||+|+||.+++++|+++|++|++++|+...      ..+..+++.+...     .++.++.+|++|.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~D~~~~~~~~~~   76 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG-----RSVEFEEMDILDQGALQRL   76 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT-----CCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccC-----CceEEEECCCCCHHHHHHH
Confidence            5789999999999999999999999999999985432      2222333332111     3578899999999999888


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.     ++|++|||||.....    .+.+++++.+++|+.++..+++++    .+.+.++||++||...+... ...
T Consensus        77 ~~~~-----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~-~~~  142 (348)
T 1ek6_A           77 FKKY-----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNP-QYL  142 (348)
T ss_dssp             HHHC-----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSC-SSS
T ss_pred             HHhc-----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCC-CCC
Confidence            7752     799999999975321    134567889999999999999875    34455799999997765432 111


Q ss_pred             ccccccccccC-CCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKY-TSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~-~~~~~Y~asKaal~~l~~~  248 (249)
                      .   +++..+. |....|+.||++.+.++++
T Consensus       143 ~---~~E~~~~~p~~~~Y~~sK~~~e~~~~~  170 (348)
T 1ek6_A          143 P---LDEAHPTGGCTNPYGKSKFFIEEMIRD  170 (348)
T ss_dssp             S---BCTTSCCCCCSSHHHHHHHHHHHHHHH
T ss_pred             C---cCCCCCCCCCCCchHHHHHHHHHHHHH
Confidence            1   1222222 3367899999999998864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.79  E-value=3.8e-19  Score=155.07  Aligned_cols=163  Identities=16%  Similarity=0.056  Sum_probs=116.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH--cCCEEEEEEcChHHHHHHHH---HHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAE--SGAHVVMAVRNLKAANELIQ---KWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~--~G~~Vil~~r~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      ++++++|+||||+|+||.+++++|++  +|++|++++|+.........   .+......  ...++.++.+|++|.++++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTTCHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCCCHHHHH
Confidence            57889999999999999999999999  99999999997642110000   00000000  1135789999999999887


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      ++      ...++|++|||||....      +.+.++..+++|+.++..+++++..    .+ ++||++||...+... .
T Consensus        85 ~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~~~V~~SS~~vyg~~-~  146 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----KK-AKVIYASSAGVYGNT-K  146 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGGCSC-C
T ss_pred             Hh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEeCcHHHhCCC-C
Confidence            76      23479999999996432      4467889999999999999998732    23 469999996554332 2


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .    ..++..+..+...|+.||++.+.+++.
T Consensus       147 ~----~~~E~~~~~p~~~Y~~sK~~~E~~~~~  174 (362)
T 3sxp_A          147 A----PNVVGKNESPENVYGFSKLCMDEFVLS  174 (362)
T ss_dssp             S----SBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             C----CCCCCCCCCCCChhHHHHHHHHHHHHH
Confidence            1    223333445667899999999999874

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.79  E-value=3e-19  Score=155.35  Aligned_cols=165  Identities=15%  Similarity=0.115  Sum_probs=120.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChH--HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           67 TCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLK--AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++|||||+|+||.+++++|+++ |++|++++|+..  ..+.. +++.       ...++.++.+|++|.+++.+++++. 
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~~~-   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-------ESNRYNFEHADICDSAEITRIFEQY-   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-------TCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-------cCCCeEEEECCCCCHHHHHHHHhhc-
Confidence            4899999999999999999998 799999998642  11111 1110       0136889999999999999988762 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-----CCeEEEEcCCccccCCCC--
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-----PSRIINVNSVMHYVGFVD--  216 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-----~g~Iv~vsS~~~~~~~~~--  216 (249)
                          ++|++|||||...    .+.+.+++++.+++|+.++..+++++.+.|..-+     .|+||++||.+.+.....  
T Consensus        73 ----~~d~vih~A~~~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~  144 (361)
T 1kew_A           73 ----QPDAVMHLAAESH----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD  144 (361)
T ss_dssp             ----CCSEEEECCSCCC----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG
T ss_pred             ----CCCEEEECCCCcC----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccc
Confidence                7999999999753    1234466788999999999999999999875422     359999999765432210  


Q ss_pred             ----ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 ----TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ----~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          .+++...++..+.++...|++||++.+.+++.
T Consensus       145 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  180 (361)
T 1kew_A          145 EVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA  180 (361)
T ss_dssp             GSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence                01111233334456778999999999998864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.78  E-value=5.8e-18  Score=149.32  Aligned_cols=169  Identities=11%  Similarity=0.056  Sum_probs=118.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH----------------HHHHHHHhhcCCCCCCceEEEE
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE----------------LIQKWQEEWSGKGLPLNIEAME  126 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~----------------~~~~~~~~~~~~~~~~~v~~~~  126 (249)
                      -.+..||||||+|.||.+++++|+++|++|++++|+.....+                ...++.... .    .++.++.
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~----~~v~~~~   83 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-G----KSIELYV   83 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-C----CCCEEEE
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-C----CceEEEE
Confidence            356789999999999999999999999999999987543211                112211111 1    3578899


Q ss_pred             ccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEE
Q 025705          127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINV  205 (249)
Q Consensus       127 ~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~v  205 (249)
                      +|++|.+++.++++..     ++|++|||||...... ...+++.++..+++|+.++..+++++.+.    +. .+||++
T Consensus        84 ~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~  153 (404)
T 1i24_A           84 GDICDFEFLAESFKSF-----EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKL  153 (404)
T ss_dssp             SCTTSHHHHHHHHHHH-----CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEE
T ss_pred             CCCCCHHHHHHHHhcc-----CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEe
Confidence            9999999999888765     6999999999753211 12256677889999999999999998654    22 499999


Q ss_pred             cCCccccCCCCccccccc-----------cccccCCCcccchhhHHHHHhhhhc
Q 025705          206 NSVMHYVGFVDTEDMNVV-----------SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       206 sS~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ||.+.+... . .+.++.           ....+..+...|++||++.+.+++.
T Consensus       154 SS~~vyg~~-~-~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  205 (404)
T 1i24_A          154 GTMGEYGTP-N-IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAF  205 (404)
T ss_dssp             CCGGGGCCC-S-SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CcHHHhCCC-C-CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHH
Confidence            997655332 1 111110           0002345667899999999988753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.78  E-value=2e-18  Score=149.85  Aligned_cols=166  Identities=14%  Similarity=0.019  Sum_probs=119.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+++++||||+|+||.+++++|+++|++|++++|+.....+..+++.+..... ...++.++.+|++|.++++++++  
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-QWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH-HHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc-cCCceEEEECCCCCHHHHHHHhc--
Confidence            345889999999999999999999999999999997532112222222211100 00267889999999998877765  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                           ++|++||+||.....    .+.++++..+++|+.++..+++++.+.    +.++||++||...+.+... .+   
T Consensus       102 -----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~-~~---  164 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPG-LP---  164 (352)
T ss_dssp             -----TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCC-SS---
T ss_pred             -----CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhcCCCCC-CC---
Confidence                 699999999964311    134667889999999999999998653    4579999999887654321 11   


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .++..+..+...|+.+|++.+.+++.
T Consensus       165 ~~E~~~~~~~~~Y~~sK~~~e~~~~~  190 (352)
T 1sb8_A          165 KVEDTIGKPLSPYAVTKYVNELYADV  190 (352)
T ss_dssp             BCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHH
Confidence            22223335667899999999998753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.78  E-value=3.4e-18  Score=147.92  Aligned_cols=153  Identities=16%  Similarity=0.082  Sum_probs=114.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +..+.++++||||||+|+||.+++++|+++|++|++++|+.+.                  .++.++.+|++|.+.+.++
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------------~~~~~~~~Dl~d~~~~~~~   74 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------------TGGEEVVGSLEDGQALSDA   74 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------------SCCSEEESCTTCHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------------CCccEEecCcCCHHHHHHH
Confidence            4456788999999999999999999999999999999998653                  2567889999999988877


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++       ++|++||+||...      .+.+.++..+++|+.++..+++++..    .+.++||++||...+....  +
T Consensus        75 ~~-------~~d~vih~A~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~--~  135 (347)
T 4id9_A           75 IM-------GVSAVLHLGAFMS------WAPADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENR--P  135 (347)
T ss_dssp             HT-------TCSEEEECCCCCC------SSGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTS--C
T ss_pred             Hh-------CCCEEEECCcccC------cchhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCC--C
Confidence            65       6999999999643      23455689999999999999998744    4557999999976654421  1


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .....++..+..+...|+.||.+.+.++++
T Consensus       136 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (347)
T 4id9_A          136 EFLPVTEDHPLCPNSPYGLTKLLGEELVRF  165 (347)
T ss_dssp             SSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            111233444556778899999999998763

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.78  E-value=7.1e-19  Score=151.50  Aligned_cols=158  Identities=15%  Similarity=0.095  Sum_probs=116.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChH--HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLK--AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++++||||+|+||.+++++|+++|  ++|++++|+..  ..+.. +++.       ...++.++.+|++|.+.+++++ 
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-------~~~~~~~~~~Dl~d~~~~~~~~-   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-------DDPRYTFVKGDVADYELVKELV-   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-------TCTTEEEEECCTTCHHHHHHHH-
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-------cCCceEEEEcCCCCHHHHHHHh-
Confidence            4679999999999999999999997  89999998642  11111 1110       0136888999999999888876 


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                            +++|++|||||...    .+.+.+++++.+++|+.++..+++++.+.   +..++||++||.+.+.... ..  
T Consensus        74 ------~~~d~vih~A~~~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~-~~--  137 (336)
T 2hun_A           74 ------RKVDGVVHLAAESH----VDRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDIL-KG--  137 (336)
T ss_dssp             ------HTCSEEEECCCCCC----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCS-SS--
T ss_pred             ------hCCCEEEECCCCcC----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCC-CC--
Confidence                  27999999999743    12234567889999999999999999876   2236999999986543321 11  


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       .+++..+.++...|++||++.+.++++
T Consensus       138 -~~~E~~~~~~~~~Y~~sK~~~e~~~~~  164 (336)
T 2hun_A          138 -SFTENDRLMPSSPYSATKAASDMLVLG  164 (336)
T ss_dssp             -CBCTTBCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -CcCCCCCCCCCCccHHHHHHHHHHHHH
Confidence             122333446678899999999998864

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.77  E-value=2.2e-18  Score=148.67  Aligned_cols=160  Identities=18%  Similarity=0.105  Sum_probs=112.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||++++++|+++|++|++++|......+..+++.+...     .++.++.+|++|.++++++++..    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~----   72 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-----KHPTFVEGDIRNEALMTEILHDH----   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT-----SCCEEEECCTTCHHHHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC-----CcceEEEccCCCHHHHHHHhhcc----
Confidence            589999999999999999999999999998643221112222222111     25778899999999998887752    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++|||||.....    ...+..++.+++|+.++..+++++    ++.+.++||++||.+.+... ....   .++.
T Consensus        73 -~~D~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~-~~~~---~~e~  139 (338)
T 1udb_A           73 -AIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDN-PKIP---YVES  139 (338)
T ss_dssp             -TCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSC-CSSS---BCTT
T ss_pred             -CCCEEEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCC-CCCC---cCcc
Confidence             699999999964311    123456778999999999998864    34455799999997655322 1111   1121


Q ss_pred             ccC-CCcccchhhHHHHHhhhhc
Q 025705          227 RKY-TSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~-~~~~~Y~asKaal~~l~~~  248 (249)
                      .+. ++...|++||++++.++++
T Consensus       140 ~~~~~~~~~Y~~sK~~~e~~~~~  162 (338)
T 1udb_A          140 FPTGTPQSPYGKSKLMVEQILTD  162 (338)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCChHHHHHHHHHHHHHH
Confidence            222 3467899999999998764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.77  E-value=7.6e-19  Score=142.73  Aligned_cols=135  Identities=15%  Similarity=0.191  Sum_probs=106.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~  145 (249)
                      +++||||+|+||++++++|+++|++|++++|+++++++.              .++.++.+|++| .+++.++++     
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------------~~~~~~~~D~~d~~~~~~~~~~-----   62 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------------NNVKAVHFDVDWTPEEMAKQLH-----   62 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------------TTEEEEECCTTSCHHHHHTTTT-----
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------------CCceEEEecccCCHHHHHHHHc-----
Confidence            589999999999999999999999999999997654221              368899999999 887766553     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        ++|++|||||....            ..+++|+.++..+++++    ++.+.++||++||..+..+.+. +      +
T Consensus        63 --~~d~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~-~------e  117 (219)
T 3dqp_A           63 --GMDAIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKW-I------G  117 (219)
T ss_dssp             --TCSEEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGC-C------S
T ss_pred             --CCCEEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcc-c------c
Confidence              69999999997541            26789999999988886    4445579999999877654310 0      0


Q ss_pred             cccCCCcccchhhHHHHHhhh
Q 025705          226 RRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~  246 (249)
                       ....+...|+.+|++.+.+.
T Consensus       118 -~~~~~~~~Y~~sK~~~e~~~  137 (219)
T 3dqp_A          118 -AGFDALKDYYIAKHFADLYL  137 (219)
T ss_dssp             -HHHHHTHHHHHHHHHHHHHH
T ss_pred             -cccccccHHHHHHHHHHHHH
Confidence             11133678999999999987

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.77  E-value=3.5e-18  Score=147.11  Aligned_cols=163  Identities=17%  Similarity=0.039  Sum_probs=117.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH-HHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN-ELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .-.++++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+.       ...++.++.+|++|.+++.++++
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~   83 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-------IEGDIQYEDGDMADACSVQRAVI   83 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-------CGGGEEEEECCTTCHHHHHHHHH
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-------ccCceEEEECCCCCHHHHHHHHH
Confidence            445788999999999999999999999999999999865321 1111110       01368889999999999999888


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ..     ++|++||+||....    +.+.++++..+++|+.++..+++++.+.    + .++||++||...+.+... . 
T Consensus        84 ~~-----~~d~Vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~-~-  148 (335)
T 1rpn_A           84 KA-----QPQEVYNLAAQSFV----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQA-E-  148 (335)
T ss_dssp             HH-----CCSEEEECCSCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSS-S-
T ss_pred             Hc-----CCCEEEECccccch----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCC-C-
Confidence            75     68999999996431    1123456789999999999999988553    3 269999999766544321 1 


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                        ..++..+..+...|+.||++.+.++++
T Consensus       149 --~~~E~~~~~p~~~Y~~sK~~~e~~~~~  175 (335)
T 1rpn_A          149 --RQDENTPFYPRSPYGVAKLYGHWITVN  175 (335)
T ss_dssp             --SBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             --CCCcccCCCCCChhHHHHHHHHHHHHH
Confidence              122333344567899999999998764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.77  E-value=5e-18  Score=147.13  Aligned_cols=165  Identities=12%  Similarity=-0.023  Sum_probs=121.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+++++||||+|+||.+++++|+++|++|++++|+........+.+....... ...++.++.+|++|.+++.++++   
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTE-QWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHH-HHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccc-cCCceEEEEccCCCHHHHHHHhc---
Confidence            46899999999999999999999999999999997655444444444321100 00268899999999998877665   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++||+||....    ....++.+..+++|+.++..+++++..    .+.+++|++||...+..... .   ..
T Consensus       100 ----~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~-~---~~  163 (351)
T 3ruf_A          100 ----GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDHPA-L---PK  163 (351)
T ss_dssp             ----TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCC-S---SB
T ss_pred             ----CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCC-C---CC
Confidence                69999999996432    223456778899999999999998744    34569999999876644321 1   12


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+..+...|+.+|.+.+.++++
T Consensus       164 ~E~~~~~p~~~Y~~sK~~~E~~~~~  188 (351)
T 3ruf_A          164 VEENIGNPLSPYAVTKYVNEIYAQV  188 (351)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHH
Confidence            2333445667899999999988763

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.76  E-value=5.7e-19  Score=147.69  Aligned_cols=145  Identities=18%  Similarity=0.115  Sum_probs=112.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||+|+||++++++|+++|++|++++|+..+..               ...+.++.+|++|.+.+.++++     
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~-----   62 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------------EAHEEIVACDLADAQAVHDLVK-----   62 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------------CTTEEECCCCTTCHHHHHHHHT-----
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------------CCCccEEEccCCCHHHHHHHHc-----
Confidence            67999999999999999999999999999999864310               0246788899999998877765     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        ++|++|||||..        +.+.+++.+++|+.++..+++++.+    .+.++||++||..++...+....   .++
T Consensus        63 --~~d~vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~---~~E  125 (267)
T 3ay3_A           63 --DCDGIIHLGGVS--------VERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTR---IDT  125 (267)
T ss_dssp             --TCSEEEECCSCC--------SCCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSC---BCT
T ss_pred             --CCCEEEECCcCC--------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCC---CCC
Confidence              589999999975        1245678999999999999998754    34579999999877654322111   222


Q ss_pred             cccCCCcccchhhHHHHHhhhh
Q 025705          226 RRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+..+...|+.||++++.+++
T Consensus       126 ~~~~~~~~~Y~~sK~~~e~~~~  147 (267)
T 3ay3_A          126 EVPRRPDSLYGLSKCFGEDLAS  147 (267)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHH
Confidence            2333456789999999999876

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.76  E-value=2.7e-18  Score=146.64  Aligned_cols=145  Identities=18%  Similarity=0.161  Sum_probs=88.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++++||||+|+||++++++|+++|++|++++|+.+.         .         +  ++.+|++|.+++.++++..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~---------~--~~~~Dl~d~~~~~~~~~~~--   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------P---------K--FEQVNLLDSNAVHHIIHDF--   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------------CHHHHHHH--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------C---------C--eEEecCCCHHHHHHHHHhh--
Confidence            5789999999999999999999999999999987532         0         1  5678999999998888764  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         ++|++|||||....    +.+.+++++.+++|+.++..+++++.+.    + ++||++||...+.+.  ..+   ++
T Consensus        60 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~--~~~---~~  122 (315)
T 2ydy_A           60 ---QPHVIVHCAAERRP----DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGT--NPP---YR  122 (315)
T ss_dssp             ---CCSEEEECC-----------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSS--SCS---BC
T ss_pred             ---CCCEEEECCcccCh----hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCC--CCC---CC
Confidence               69999999997532    2245678899999999999999998753    3 599999998876551  111   22


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+..+...|+.+|++.+.+++.
T Consensus       123 E~~~~~~~~~Y~~sK~~~e~~~~~  146 (315)
T 2ydy_A          123 EEDIPAPLNLYGKTKLDGEKAVLE  146 (315)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcCHHHHHHHHHHHHHHH
Confidence            333345677899999999998864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.75  E-value=3.6e-18  Score=147.27  Aligned_cols=151  Identities=19%  Similarity=0.157  Sum_probs=108.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      .+++||||+|+||.+++++|+++|++|++++|+..+.++.    ..        .++.++.+|++|.+++.++++     
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--------~~~~~~~~Dl~d~~~~~~~~~-----   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--------LEPECRVAEMLDHAGLERALR-----   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--------GCCEEEECCTTCHHHHHHHTT-----
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--------CCeEEEEecCCCHHHHHHHHc-----
Confidence            3799999999999999999999999999999987654221    11        257888999999988877654     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        ++|++||+||...      ...+.+++.+++|+.++..+++++.+.    +.++||++||...+.+......+   ++
T Consensus        77 --~~d~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~---~E  141 (342)
T 2x4g_A           77 --GLDGVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPG---HE  141 (342)
T ss_dssp             --TCSEEEEC------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCB---CT
T ss_pred             --CCCEEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCC---CC
Confidence              5899999999643      234567889999999999999998764    34699999998876544221111   22


Q ss_pred             cccCCC----cccchhhHHHHHhhhhc
Q 025705          226 RRKYTS----LMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~----~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+    ...|+.+|++.+.++++
T Consensus       142 ~~~~~p~~~~~~~Y~~sK~~~e~~~~~  168 (342)
T 2x4g_A          142 GLFYDSLPSGKSSYVLCKWALDEQARE  168 (342)
T ss_dssp             TCCCSSCCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccccChHHHHHHHHHHHHHH
Confidence            223333    67899999999998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.75  E-value=1.2e-17  Score=144.07  Aligned_cols=163  Identities=17%  Similarity=0.031  Sum_probs=112.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +++++|||||+|+||.+++++|+++|++|+++.|+.+..++.. .+.+ ...  ...++.++.+|++|.++++++++   
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~---   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLD-LPK--AETHLTLWKADLADEGSFDEAIK---   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHT-STT--HHHHEEEEECCTTSTTTTHHHHT---
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHh-ccc--CCCeEEEEEcCCCCHHHHHHHHc---
Confidence            5689999999999999999999999999999999876433221 1111 000  00257888999999988877654   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++||+|+..   ...  ..+..++.+++|+.++..+++++.+..   +.++||++||.+++.+......  .+
T Consensus        77 ----~~d~Vih~A~~~---~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~--~~  142 (337)
T 2c29_D           77 ----GCTGVFHVATPM---DFE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLP--VY  142 (337)
T ss_dssp             ----TCSEEEECCCCC---CSS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCS--EE
T ss_pred             ----CCCEEEEecccc---CCC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCc--cc
Confidence                589999999854   121  122345789999999999999987653   2469999999987665421111  11


Q ss_pred             cccc---------cCCCcccchhhHHHHHhhhh
Q 025705          224 SGRR---------KYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       224 ~~~~---------~~~~~~~Y~asKaal~~l~~  247 (249)
                      ++..         ..++...|++||++.+.+++
T Consensus       143 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~  175 (337)
T 2c29_D          143 DESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAW  175 (337)
T ss_dssp             CTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHH
T ss_pred             CcccCCchhhhcccCCccchHHHHHHHHHHHHH
Confidence            1111         01234479999999998764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.75  E-value=1.5e-17  Score=133.13  Aligned_cols=139  Identities=13%  Similarity=0.048  Sum_probs=104.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++++||||+|+||++++++|+++|++|++++|++++.+..            ...++.++.+|++|.+++.++++    
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~----   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------------GPRPAHVVVGDVLQAADVDKTVA----   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------------SCCCSEEEESCTTSHHHHHHHHT----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------------cCCceEEEEecCCCHHHHHHHHc----
Confidence            47899999999999999999999999999999997653211            01367899999999998877664    


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         .+|++|||||.....   +  .      .++|+.++..+.+++..    .+.++||++||...+......       
T Consensus        67 ---~~d~vi~~a~~~~~~---~--~------~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~~~~~~-------  121 (206)
T 1hdo_A           67 ---GQDAVIVLLGTRNDL---S--P------TTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDPTKV-------  121 (206)
T ss_dssp             ---TCSEEEECCCCTTCC---S--C------CCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCTTCS-------
T ss_pred             ---CCCEEEECccCCCCC---C--c------cchHHHHHHHHHHHHHH----hCCCeEEEEeeeeeccCcccc-------
Confidence               489999999975431   1  1      13777777777776543    345799999998665433100       


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ..+...|+.+|++++.+.++
T Consensus       122 ----~~~~~~y~~~K~~~e~~~~~  141 (206)
T 1hdo_A          122 ----PPRLQAVTDDHIRMHKVLRE  141 (206)
T ss_dssp             ----CGGGHHHHHHHHHHHHHHHH
T ss_pred             ----cccchhHHHHHHHHHHHHHh
Confidence                01567899999999998764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.75  E-value=6.3e-18  Score=146.18  Aligned_cols=165  Identities=13%  Similarity=0.072  Sum_probs=115.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .+.+++|+||||+|+||.+++++|+++|  ++|+..+|.....  ..+.+...    ....++.++.+|++|.+.+.+++
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~----~~~~~~~~~~~Dl~d~~~~~~~~   94 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSI----QDHPNYYFVKGEIQNGELLEHVI   94 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTT----TTCTTEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhh----ccCCCeEEEEcCCCCHHHHHHHH
Confidence            4567899999999999999999999999  6788887764211  01111111    11147899999999999999988


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +..     ++|++||+||.....    ...+..+..+++|+.++..+++++...    +.++||++||...+......  
T Consensus        95 ~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~~~~~--  159 (346)
T 4egb_A           95 KER-----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGSLGKT--  159 (346)
T ss_dssp             HHH-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCCCCSS--
T ss_pred             hhc-----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCCCCcC--
Confidence            864     699999999975422    244567788999999999999987543    45689999998665543211  


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       ..+++..+..+...|+.+|.+.+.++++
T Consensus       160 -~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  187 (346)
T 4egb_A          160 -GRFTEETPLAPNSPYSSSKASADMIALA  187 (346)
T ss_dssp             -CCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -CCcCCCCCCCCCChhHHHHHHHHHHHHH
Confidence             1233344456678899999999988764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.74  E-value=9.7e-18  Score=158.29  Aligned_cols=170  Identities=18%  Similarity=0.175  Sum_probs=117.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+++++++||||+|+||.+++++|+++|++|++++|+.....+..+++.... .    .++.++.+|++|.++++++++
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~----~~v~~v~~Dl~d~~~l~~~~~   81 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-K----HHIPFYEVDLCDRKGLEKVFK   81 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-T----SCCCEEECCTTCHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-C----CceEEEEcCCCCHHHHHHHHH
Confidence            34678999999999999999999999999999999987643322333332211 1    357788999999999988877


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.     ++|++|||||......    ..+..++.+++|+.++..+++++    ++.+.++||++||.+.+......++.
T Consensus        82 ~~-----~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~  148 (699)
T 1z45_A           82 EY-----KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNM  148 (699)
T ss_dssp             HS-----CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTC
T ss_pred             hC-----CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCcccccc
Confidence            53     6999999999753211    12334668899999999988765    33445799999998665332111111


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ....+..+..+...|+.||++++.++++
T Consensus       149 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  176 (699)
T 1z45_A          149 IPIPEECPLGPTNPYGHTKYAIENILND  176 (699)
T ss_dssp             CSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCccccCCCCCCChHHHHHHHHHHHHHH
Confidence            1122222334567899999999998764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.74  E-value=1.5e-17  Score=142.90  Aligned_cols=154  Identities=14%  Similarity=0.116  Sum_probs=115.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||+|+||.+++++|+++|++|++++|+.....       +...     .++.++.+|++|.+.+++++++    
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~-----~~~~~~~~D~~~~~~~~~~~~~----   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-------DAIT-----EGAKFYNGDLRDKAFLRDVFTQ----   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-------GGSC-----TTSEEEECCTTCHHHHHHHHHH----
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-------hhcC-----CCcEEEECCCCCHHHHHHHHhh----
Confidence            57999999999999999999999999999998754321       1111     2578889999999999888775    


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                       .++|++||+||.....    .+.+++++.+++|+.++..+++++.    +.+.++||++||...+... ...   ..++
T Consensus        66 -~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~~~-~~~---~~~E  132 (330)
T 2c20_A           66 -ENIEAVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMD----EFKVDKFIFSSTAATYGEV-DVD---LITE  132 (330)
T ss_dssp             -SCEEEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGGCSC-SSS---SBCT
T ss_pred             -cCCCEEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHH----HcCCCEEEEeCCceeeCCC-CCC---CCCc
Confidence             3799999999975321    1345678899999999999998863    3455799999997665432 111   1223


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+...|+.||++.+.+++.
T Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A          133 ETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             TSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHH
Confidence            33345678899999999998764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.74  E-value=5.9e-18  Score=144.40  Aligned_cols=154  Identities=18%  Similarity=0.108  Sum_probs=112.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||++++++|+++|++|++++|......       +...     ..+.++.+|++|.+++++++++.    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-------~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~----   65 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR-------ENVP-----KGVPFFRVDLRDKEGVERAFREF----   65 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG-------GGSC-----TTCCEECCCTTCHHHHHHHHHHH----
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch-------hhcc-----cCeEEEECCCCCHHHHHHHHHhc----
Confidence            5899999999999999999999999999998532210       0000     24677889999999998888752    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC-CCccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF-VDTEDMNVVSG  225 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~-~~~~~~~~~~~  225 (249)
                       ++|++||+||....    ..+.++++..+++|+.++..+++++..    .+.++||++||..+.++. .....   .++
T Consensus        66 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~---~~E  133 (311)
T 2p5y_A           66 -RPTHVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGER---AEE  133 (311)
T ss_dssp             -CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCC---BCT
T ss_pred             -CCCEEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCC---cCC
Confidence             68999999996431    124466788999999999999998753    345799999998333332 11111   112


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+...|++||++.+.+++.
T Consensus       134 ~~~~~~~~~Y~~sK~~~e~~~~~  156 (311)
T 2p5y_A          134 TWPPRPKSPYAASKAAFEHYLSV  156 (311)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHH
Confidence            22334567899999999998763

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.74  E-value=1.4e-17  Score=139.28  Aligned_cols=142  Identities=18%  Similarity=0.167  Sum_probs=111.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||++++++|++ |++|++++|+++. +       .         .   +.+|++|.++++++++..    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~-------~---------~---~~~Dl~~~~~~~~~~~~~----   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q-------G---------G---YKLDLTDFPRLEDFIIKK----   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T-------T---------C---EECCTTSHHHHHHHHHHH----
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C-------C---------C---ceeccCCHHHHHHHHHhc----
Confidence            589999999999999999994 8999999998631 0       1         1   789999999999988875    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++|||||....    +.+.+++++.+++|+.++..+++++.+    .+ ++||++||..++.+...     ..++.
T Consensus        57 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~-----~~~e~  121 (273)
T 2ggs_A           57 -RPDVIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKG-----NYKEE  121 (273)
T ss_dssp             -CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSC-----SBCTT
T ss_pred             -CCCEEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCC-----CcCCC
Confidence             69999999997532    223567889999999999999999854    23 59999999987755421     12222


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+...|+++|++++.+++.
T Consensus       122 ~~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A          122 DIPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHhC
Confidence            3334567899999999998863

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.74  E-value=5.3e-18  Score=146.71  Aligned_cols=159  Identities=15%  Similarity=0.094  Sum_probs=114.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAES--GAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++++||||+|+||.+++++|+++  |++|++++|+... ..+..++    ..    ..++.++.+|++|.++++++++  
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~----~~----~~~~~~~~~Dl~d~~~~~~~~~--   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA----IL----GDRVELVVGDIADAELVDKLAA--   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG----GC----SSSEEEEECCTTCHHHHHHHHT--
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhh----hc----cCCeEEEECCCCCHHHHHHHhh--
Confidence            68999999999999999999999  8999999996421 1111111    11    1368889999999998877765  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC------
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD------  216 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~------  216 (249)
                           .+|++|||||....    +.+.++++..+++|+.++..+++++.+.    + ++||++||...+.....      
T Consensus        75 -----~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~  140 (348)
T 1oc2_A           75 -----KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPG  140 (348)
T ss_dssp             -----TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTT
T ss_pred             -----cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccc
Confidence                 46999999997531    2234567789999999999999998765    3 49999999865533210      


Q ss_pred             --ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 --TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 --~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                        .++....++..+.++...|++||++.+.++++
T Consensus       141 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  174 (348)
T 1oc2_A          141 HGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKA  174 (348)
T ss_dssp             TTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccccCCCcCCCCCCCCCCccHHHHHHHHHHHHH
Confidence              00001223333456678899999999998764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.74  E-value=7.3e-18  Score=148.01  Aligned_cols=160  Identities=17%  Similarity=0.103  Sum_probs=116.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++++++||||+|+||.+++++|+++|++|++++|+.......    .        ..++.++.+|++|.+++.++++  
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--------~~~v~~~~~Dl~d~~~~~~~~~--   92 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----D--------MFCDEFHLVDLRVMENCLKVTE--   92 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----G--------GTCSEEEECCTTSHHHHHHHHT--
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----c--------cCCceEEECCCCCHHHHHHHhC--
Confidence            3568999999999999999999999999999999986542111    0        0257888999999998887764  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc-cccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT-EDMN  221 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~-~~~~  221 (249)
                           ++|++||+||.....   ..+.+++++.+++|+.++..+++++..    .+.++||++||...+...... ++..
T Consensus        93 -----~~d~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~  160 (379)
T 2c5a_A           93 -----GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNV  160 (379)
T ss_dssp             -----TCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred             -----CCCEEEECceecCcc---cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCC
Confidence                 699999999975321   111356788999999999999998753    345699999997665432110 0001


Q ss_pred             cccccc--cCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRR--KYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~--~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+++..  +..+...|+.+|++.+.++++
T Consensus       161 ~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~  189 (379)
T 2c5a_A          161 SLKESDAWPAEPQDAFGLEKLATEELCKH  189 (379)
T ss_dssp             EECGGGGSSBCCSSHHHHHHHHHHHHHHH
T ss_pred             CcCcccCCCCCCCChhHHHHHHHHHHHHH
Confidence            112211  335667899999999998763

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.74  E-value=3e-18  Score=146.05  Aligned_cols=150  Identities=17%  Similarity=0.100  Sum_probs=113.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||+|+||.+++++|+++|++|++++|+.+...+..            ...+.++.+|++|.+ +.++++     
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~~Dl~d~~-~~~~~~-----   62 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------------NPSAELHVRDLKDYS-WGAGIK-----   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------------CTTSEEECCCTTSTT-TTTTCC-----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------------CCCceEEECccccHH-HHhhcC-----
Confidence            46999999999999999999999999999999765432211            136788999999987 544322     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        . |++||+||...    .+.+.++++..+++|+.++..+++++..    .+.++||++||...+.... .   ...++
T Consensus        63 --~-d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~-~---~~~~e  127 (312)
T 3ko8_A           63 --G-DVVFHFAANPE----VRLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDAD-V---IPTPE  127 (312)
T ss_dssp             --C-SEEEECCSSCS----SSGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCS-S---SSBCT
T ss_pred             --C-CEEEECCCCCC----chhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCC-C---CCCCC
Confidence              3 99999999532    2345667889999999999999998743    3456999999987664431 1   11233


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+...|+.||++.+.++++
T Consensus       128 ~~~~~p~~~Y~~sK~~~e~~~~~  150 (312)
T 3ko8_A          128 EEPYKPISVYGAAKAAGEVMCAT  150 (312)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHH
Confidence            34556778999999999998764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.74  E-value=1.3e-17  Score=148.67  Aligned_cols=167  Identities=17%  Similarity=0.128  Sum_probs=113.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH---HHHHHHHHHHHhhcC---CCCCCceEEEEccCCCHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK---AANELIQKWQEEWSG---KGLPLNIEAMELDLLSLD  133 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~---~~~~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~  133 (249)
                      .....+++|+||||+|+||.+++++|+++|++|++++|+.+   ..+...+.+...+..   .....++.++.+|++|.+
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            44566789999999999999999999999999999999877   333333333221100   000137899999999988


Q ss_pred             HHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          134 SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       134 ~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      .+.        ..+++|+||||||...       ..+.++..+++|+.++..+++++.+     +.++||++||..+  |
T Consensus       144 ~l~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~--G  201 (427)
T 4f6c_A          144 DVV--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV--G  201 (427)
T ss_dssp             CCC--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG--G
T ss_pred             cCC--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh--C
Confidence            776        3568999999999753       2356788999999999999999866     3469999999887  2


Q ss_pred             CC-----CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FV-----DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~-----~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..     ....+.+.+......+...|+.||++.+.++++
T Consensus       202 ~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~  241 (427)
T 4f6c_A          202 TYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLE  241 (427)
T ss_dssp             SEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHH
Confidence            21     011111111111234778999999999998764

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.73  E-value=8.9e-18  Score=136.84  Aligned_cols=143  Identities=11%  Similarity=-0.017  Sum_probs=107.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||+|+||++++++|+++|++|++++|++++.+..             ..++.++.+|++|.+++.++++     
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~-----   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------------NEHLKVKKADVSSLDEVCEVCK-----   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------------CTTEEEECCCTTCHHHHHHHHT-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------------cCceEEEEecCCCHHHHHHHhc-----
Confidence            6899999999999999999999999999999997654211             1368899999999999888765     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        ++|++|||||....          ....+++|+.++..+.+++..    .+.++||++||..++.+.....     ..
T Consensus        67 --~~d~vi~~a~~~~~----------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~-----~~  125 (227)
T 3dhn_A           67 --GADAVISAFNPGWN----------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLR-----LM  125 (227)
T ss_dssp             --TCSEEEECCCC----------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEE-----GG
T ss_pred             --CCCEEEEeCcCCCC----------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCc-----cc
Confidence              58999999986421          112678899998888887643    4456999999988776543211     11


Q ss_pred             cccCCCcccchhhHHHHHhhhh
Q 025705          226 RRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+..+...|+.+|++.+.+.+
T Consensus       126 ~~~~~p~~~Y~~sK~~~e~~~~  147 (227)
T 3dhn_A          126 DSGEVPENILPGVKALGEFYLN  147 (227)
T ss_dssp             GTTCSCGGGHHHHHHHHHHHHH
T ss_pred             cCCcchHHHHHHHHHHHHHHHH
Confidence            2233456789999999996654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.73  E-value=1.2e-17  Score=142.34  Aligned_cols=153  Identities=12%  Similarity=0.062  Sum_probs=115.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAES--GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++++||||+|+||.+++++|+++  |++|++++|+....+     +..         ++.++.+|++|.+++++++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~---------~~~~~~~D~~d~~~~~~~~~~~   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN---------SGPFEVVNALDFNQIEHLVEVH   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH---------SSCEEECCTTCHHHHHHHHHHT
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC---------CCceEEecCCCHHHHHHHHhhc
Confidence            467999999999999999999999  899999999865421     111         3567899999999998887753


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                           ++|++||+||....     ...++.++.+++|+.++..+++++.+    .+.+++|++||...+.+......   
T Consensus        68 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~---  130 (312)
T 2yy7_A           68 -----KITDIYLMAALLSA-----TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKEN---  130 (312)
T ss_dssp             -----TCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSS---
T ss_pred             -----CCCEEEECCccCCC-----chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCC---
Confidence                 69999999996431     12356788899999999999998754    34569999999877654321111   


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .++..+..+...|+.||++.+.++++
T Consensus       131 ~~e~~~~~~~~~Y~~sK~~~e~~~~~  156 (312)
T 2yy7_A          131 TPQYTIMEPSTVYGISKQAGERWCEY  156 (312)
T ss_dssp             BCSSCBCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccCcCCCCchhHHHHHHHHHHHHH
Confidence            12223335567899999999998763

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.73  E-value=6.8e-18  Score=144.11  Aligned_cols=150  Identities=19%  Similarity=0.140  Sum_probs=109.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      +++|||||+|+||.+++++|+++|..|++..|+....+..             ...+.++.+|+++ +++.++++     
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~-~~~~~~~~-----   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-------------NEAARLVKADLAA-DDIKDYLK-----   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-------------CTTEEEECCCTTT-SCCHHHHT-----
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-------------CCCcEEEECcCCh-HHHHHHhc-----
Confidence            4699999999999999999999995555544443221111             1367889999999 77776654     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        ++|++||+||...    .+.+.+++++.+++|+.++..+++++    .+.+.++||++||...+.... .   ...++
T Consensus        63 --~~d~vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~-~---~~~~E  128 (313)
T 3ehe_A           63 --GAEEVWHIAANPD----VRIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAK-V---IPTPE  128 (313)
T ss_dssp             --TCSEEEECCCCCC----CC-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCS-S---SSBCT
T ss_pred             --CCCEEEECCCCCC----hhhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCC-C---CCCCC
Confidence              6999999999532    23456778899999999999999885    344557999999987664321 1   11223


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+...|+.||++.+.+++.
T Consensus       129 ~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A          129 DYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHH
Confidence            34456778899999999998864

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.72  E-value=1.6e-17  Score=142.05  Aligned_cols=161  Identities=19%  Similarity=0.076  Sum_probs=106.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ||++|||||+|+||++++++|+++|++|+++.| +++..++. ..+.+ ...  ...++.++.+|++|.++++++++   
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~---   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTN-LPG--ASEKLHFFNADLSNPDSFAAAIE---   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHT-STT--HHHHEEECCCCTTCGGGGHHHHT---
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHh-hhc--cCCceEEEecCCCCHHHHHHHHc---
Confidence            578999999999999999999999999999988 65321111 11111 000  00257788899999998887764   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHH-HHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDG-YEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                          ++|++||+|+..      +...++ .++.+++|+.++..+++++.+.+   +.++||++||..++.+......  .
T Consensus        74 ----~~d~vih~A~~~------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~--~  138 (322)
T 2p4h_X           74 ----GCVGIFHTASPI------DFAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKD--V  138 (322)
T ss_dssp             ----TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCS--E
T ss_pred             ----CCCEEEEcCCcc------cCCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCe--e
Confidence                579999999632      112222 35689999999999999987652   3479999999887655322110  1


Q ss_pred             cccccc---------CCCcccchhhHHHHHhhhh
Q 025705          223 VSGRRK---------YTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       223 ~~~~~~---------~~~~~~Y~asKaal~~l~~  247 (249)
                      .++...         .|....|++||++.+.+++
T Consensus       139 ~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~  172 (322)
T 2p4h_X          139 LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVL  172 (322)
T ss_dssp             ECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHH
T ss_pred             cCCccccchhhhcccCcccccHHHHHHHHHHHHH
Confidence            111100         0111269999999888764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.72  E-value=1.9e-17  Score=144.61  Aligned_cols=164  Identities=10%  Similarity=0.029  Sum_probs=115.3

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC-CHHH
Q 025705           57 PLPLPPVNDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL-SLDS  134 (249)
Q Consensus        57 ~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~  134 (249)
                      +..+..+.+++|+||||+|+||.+++++|+++ |++|++++|+.++.....+           ..++.++.+|++ |.+.
T Consensus        16 ~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----------~~~v~~~~~Dl~~d~~~   84 (372)
T 3slg_A           16 TQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----------HERMHFFEGDITINKEW   84 (372)
T ss_dssp             -------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----------STTEEEEECCTTTCHHH
T ss_pred             hcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----------CCCeEEEeCccCCCHHH
Confidence            33445577899999999999999999999998 9999999998765432211           136899999999 9998


Q ss_pred             HHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          135 VVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       135 v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      +.++++       ++|++||+||.....    ...++.++.+++|+.++..+++++...    + +++|++||...+...
T Consensus        85 ~~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~  148 (372)
T 3slg_A           85 VEYHVK-------KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMC  148 (372)
T ss_dssp             HHHHHH-------HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSC
T ss_pred             HHHHhc-------cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCC
Confidence            888776       489999999975321    123456788899999999998887443    4 699999996554432


Q ss_pred             CCcccccccccc---cc-CCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGR---RK-YTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~---~~-~~~~~~Y~asKaal~~l~~~  248 (249)
                       ....+.+.+..   .+ ..+...|+.||.+.+.++++
T Consensus       149 -~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~  185 (372)
T 3slg_A          149 -ADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWG  185 (372)
T ss_dssp             -CCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHH
Confidence             21122211110   00 13455899999999988764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.71  E-value=3.8e-17  Score=140.78  Aligned_cols=157  Identities=15%  Similarity=0.106  Sum_probs=113.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc---C---CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAES---G---AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~---G---~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++||||+|+||.+++++|+++   |   ++|++++|+.....  .+.+.. ...   ..++.++.+|++|.+++++++ 
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~-~~~---~~~~~~~~~Dl~d~~~~~~~~-   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAP-VDA---DPRLRFVHGDIRDAGLLAREL-   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGG-GTT---CTTEEEEECCTTCHHHHHHHT-
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhh-ccc---CCCeEEEEcCCCCHHHHHHHh-
Confidence            5899999999999999999997   8   99999998642100  000111 100   136888999999998887765 


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                            .++|++||+||....    +.+.+++++.+++|+.++..+++++.+.    +.++||++||.+.+.... ..  
T Consensus        75 ------~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~-~~--  137 (337)
T 1r6d_A           75 ------RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSID-SG--  137 (337)
T ss_dssp             ------TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCS-SS--
T ss_pred             ------cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCC-CC--
Confidence                  479999999996431    1234566789999999999999998765    346999999986654321 11  


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       ..++..+..+...|+.||++.+.++++
T Consensus       138 -~~~E~~~~~~~~~Y~~sK~~~e~~~~~  164 (337)
T 1r6d_A          138 -SWTESSPLEPNSPYAASKAGSDLVARA  164 (337)
T ss_dssp             -CBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCCCCCCchHHHHHHHHHHHHH
Confidence             122333445678899999999998763

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.71  E-value=9.2e-18  Score=145.93  Aligned_cols=158  Identities=14%  Similarity=0.149  Sum_probs=111.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++++++||||+|+||.+++++|+++| ++|++++|+.....     . ....      .+. +.+|++|.+.+++++
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~-~~~~------~~~-~~~d~~~~~~~~~~~  108 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----F-VNLV------DLN-IADYMDKEDFLIQIM  108 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----G-GGTT------TSC-CSEEEEHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----h-hccc------Cce-EeeecCcHHHHHHHH
Confidence            34667899999999999999999999999 89999999764321     0 0011      122 578999998888776


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +.  ..++++|++||+||....      +.+++++.+++|+.++..+++++.+.    +. +||++||...+.... ...
T Consensus       109 ~~--~~~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~-~~~  174 (357)
T 2x6t_A          109 AG--EEFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRT-SDF  174 (357)
T ss_dssp             TT--CCCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCS-SCC
T ss_pred             hh--cccCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCC-CCC
Confidence            53  235689999999997542      33457889999999999999998663    34 899999987654321 111


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         .++..+..+...|+.||++.+.+++.
T Consensus       175 ---~~E~~~~~p~~~Y~~sK~~~E~~~~~  200 (357)
T 2x6t_A          175 ---IESREYEKPLNVFGYSKFLFDEYVRQ  200 (357)
T ss_dssp             ---CSSGGGCCCSSHHHHHHHHHHHHHHH
T ss_pred             ---cCCcCCCCCCChhHHHHHHHHHHHHH
Confidence               22223334567899999999998763

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.71  E-value=3.1e-17  Score=138.63  Aligned_cols=140  Identities=19%  Similarity=0.335  Sum_probs=109.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ..++++||||+|+||.+++++|+++|++|++++|+                           .+|++|.+++.++++.. 
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------------~~Dl~d~~~~~~~~~~~-   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------------DLDITNVLAVNKFFNEK-   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------------TCCTTCHHHHHHHHHHH-
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------------cCCCCCHHHHHHHHHhc-
Confidence            45889999999999999999999999999999986                           26999999998888765 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++|||||....    +.+.+++++.+++|+.++..+++++.+.    + .+||++||.+.+.+... .+   .
T Consensus        63 ----~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~~~~~~-~~---~  125 (292)
T 1vl0_A           63 ----KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVFDGEAK-EP---I  125 (292)
T ss_dssp             ----CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSCCS-SC---B
T ss_pred             ----CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeECCCCC-CC---C
Confidence                69999999996431    2234678899999999999999998653    3 39999999876654321 11   2


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+..+...|+.+|++.+.+++.
T Consensus       126 ~E~~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A          126 TEFDEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHh
Confidence            2223334567899999999998864

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.71  E-value=9.8e-17  Score=130.28  Aligned_cols=141  Identities=13%  Similarity=0.088  Sum_probs=100.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||++++++|+++|++|++++|+++++.+..    .        ..+.++.+|++|.++     +.    +
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~--------~~~~~~~~D~~d~~~-----~~----~   60 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL----G--------ATVATLVKEPLVLTE-----AD----L   60 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT----C--------TTSEEEECCGGGCCH-----HH----H
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc----C--------CCceEEecccccccH-----hh----c
Confidence            4899999999999999999999999999999987654331    1        367899999999887     22    2


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      +++|++|||||......           ..++|+.++    +.+++.+++.+ +++|++||..++.+..... ....++.
T Consensus        61 ~~~d~vi~~ag~~~~~~-----------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~-~~~~~~~  123 (224)
T 3h2s_A           61 DSVDAVVDALSVPWGSG-----------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGADH-PMILDFP  123 (224)
T ss_dssp             TTCSEEEECCCCCTTSS-----------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTCSS-CGGGGCC
T ss_pred             ccCCEEEECCccCCCcc-----------hhhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCCCc-cccccCC
Confidence            47999999999852110           124566655    55555567666 8999999987776543211 1122222


Q ss_pred             ccCCCcccchhhHHHHHhh
Q 025705          227 RKYTSLMGYSGSKLAQVKL  245 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l  245 (249)
                      ....+...|+.+|++.+.+
T Consensus       124 ~~~~~~~~y~~sK~~~e~~  142 (224)
T 3h2s_A          124 ESAASQPWYDGALYQYYEY  142 (224)
T ss_dssp             GGGGGSTTHHHHHHHHHHH
T ss_pred             CCCccchhhHHHHHHHHHH
Confidence            2222367899999998865

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.70  E-value=5.6e-17  Score=138.47  Aligned_cols=148  Identities=18%  Similarity=0.149  Sum_probs=112.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAES--GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++||||+|+||.+++++|+++  |++|++++|+....+                 .+.++.+|++|.+++.+++++   
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------------~~~~~~~D~~d~~~~~~~~~~---   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------------GIKFITLDVSNRDEIDRAVEK---   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------------TCCEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------------CceEEEecCCCHHHHHHHHhh---
Confidence            3899999999999999999999  899999998754321                 246788999999999888775   


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                        .++|++||+||....     ...++.+..+++|+.++..+++++.+    .+.+++|++||...+.+......   ..
T Consensus        61 --~~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~---~~  126 (317)
T 3ajr_A           61 --YSIDAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNK---VP  126 (317)
T ss_dssp             --TTCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSS---BC
T ss_pred             --cCCcEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCC---cc
Confidence              269999999996431     12356788899999999999998754    34569999999887654321111   11


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+..+...|+.||++.+.+++.
T Consensus       127 e~~~~~p~~~Y~~sK~~~e~~~~~  150 (317)
T 3ajr_A          127 SITITRPRTMFGVTKIAAELLGQY  150 (317)
T ss_dssp             SSSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCchHHHHHHHHHHHHHH
Confidence            222334677899999999988753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.70  E-value=7.2e-17  Score=132.68  Aligned_cols=138  Identities=14%  Similarity=0.064  Sum_probs=94.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +..++++||||+|+||++++++|+++| ++|++++|+++++++.            ...++.++.+|++|.++++++++ 
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------------~~~~~~~~~~Dl~d~~~~~~~~~-   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------------YPTNSQIIMGDVLNHAALKQAMQ-   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------------CCTTEEEEECCTTCHHHHHHHHT-
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------------ccCCcEEEEecCCCHHHHHHHhc-
Confidence            345899999999999999999999999 8999999998654321            11368899999999999888765 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                            ++|++|||+|...                      ....++.+++.|++.+.++||++||..++.+.+...  .
T Consensus        88 ------~~D~vv~~a~~~~----------------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~--~  137 (236)
T 3qvo_A           88 ------GQDIVYANLTGED----------------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF--V  137 (236)
T ss_dssp             ------TCSEEEEECCSTT----------------------HHHHHHHHHHHHHHTTCCEEEEECCCCC-----------
T ss_pred             ------CCCEEEEcCCCCc----------------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCccc--c
Confidence                  5799999998510                      113466788889888888999999988766542110  0


Q ss_pred             cccccccCCCcccchhhHHHHH
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQV  243 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~  243 (249)
                      .............|..+|.++.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~  159 (236)
T 3qvo_A          138 EWNNAVIGEPLKPFRRAADAIE  159 (236)
T ss_dssp             -------CGGGHHHHHHHHHHH
T ss_pred             cchhhcccchHHHHHHHHHHHH
Confidence            0111111233456777776654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.69  E-value=8.9e-18  Score=135.52  Aligned_cols=133  Identities=14%  Similarity=0.064  Sum_probs=105.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++++||||+|+||++++++|+++|+  +|++++|++++         .       ..++.++.+|++|.+++.+++  
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~-------~~~~~~~~~D~~~~~~~~~~~--   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------E-------HPRLDNPVGPLAELLPQLDGS--   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------C-------CTTEECCBSCHHHHGGGCCSC--
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------c-------CCCceEEeccccCHHHHHHhh--
Confidence            457899999999999999999999998  99999998754         0       135777889998877654432  


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                             +|++|||||....      +.+.+++.+++|+.++..+++++.+    .+.++||++||..++.         
T Consensus        66 -------~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~---------  119 (215)
T 2a35_A           66 -------IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA---------  119 (215)
T ss_dssp             -------CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT---------
T ss_pred             -------hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCC---------
Confidence                   8999999996431      2456788899999999999998754    3456999999987653         


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|+.+|++++.++++
T Consensus       120 --------~~~~~y~~sK~~~e~~~~~  138 (215)
T 2a35_A          120 --------KSSIFYNRVKGELEQALQE  138 (215)
T ss_dssp             --------TCSSHHHHHHHHHHHHHTT
T ss_pred             --------CCccHHHHHHHHHHHHHHH
Confidence                    2345799999999999875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.69  E-value=2.3e-17  Score=142.24  Aligned_cols=161  Identities=16%  Similarity=0.050  Sum_probs=105.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH--HHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL--IQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++++|||||+|+||.+++++|+++|++|+++.|+.+..++.  ..++..       ..++.++.+|++|.+++.++++  
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~--   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE-------LGDLKIFRADLTDELSFEAPIA--   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG-------GSCEEEEECCTTTSSSSHHHHT--
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC-------CCcEEEEecCCCChHHHHHHHc--
Confidence            68999999999999999999999999999989886542211  111210       1257888999999988777654  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc---c
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE---D  219 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~---~  219 (249)
                           ++|++||+||...   ..  ..+..++.+++|+.++..+++++.+..   +.++||++||.+++.+.....   .
T Consensus        80 -----~~D~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~  146 (338)
T 2rh8_A           80 -----GCDFVFHVATPVH---FA--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLV  146 (338)
T ss_dssp             -----TCSEEEEESSCCC---C-----------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCC
T ss_pred             -----CCCEEEEeCCccC---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcc
Confidence                 5899999998542   11  112234589999999999999986643   246999999987544321100   1


Q ss_pred             ccccccc-----ccC-CCcccchhhHHHHHhhhh
Q 025705          220 MNVVSGR-----RKY-TSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       220 ~~~~~~~-----~~~-~~~~~Y~asKaal~~l~~  247 (249)
                      +++....     .+. +....|++||++.+.+++
T Consensus       147 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~  180 (338)
T 2rh8_A          147 VDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAW  180 (338)
T ss_dssp             CCTTTTTCC-------CCCCCCTTSCCHHHHHHH
T ss_pred             cChhhccchhhccccCCccchHHHHHHHHHHHHH
Confidence            1111000     000 112269999999988764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.69  E-value=1.4e-16  Score=128.85  Aligned_cols=137  Identities=17%  Similarity=0.171  Sum_probs=92.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||++++++|+++|++|++++|+++++++..             ..+.++.+|++|.++     +.    +
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------------~~~~~~~~D~~d~~~-----~~----~   59 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------------KDINILQKDIFDLTL-----SD----L   59 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------------SSSEEEECCGGGCCH-----HH----H
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------------CCCeEEeccccChhh-----hh----h
Confidence            5899999999999999999999999999999987654431             257889999999887     22    2


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      .++|++|||||....             ...+|+.+    ++.+++.+++.+.+++|++||..++.+.+....   ....
T Consensus        60 ~~~d~vi~~ag~~~~-------------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~---~~~~  119 (221)
T 3ew7_A           60 SDQNVVVDAYGISPD-------------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNT---LLES  119 (221)
T ss_dssp             TTCSEEEECCCSSTT-------------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-----------------
T ss_pred             cCCCEEEECCcCCcc-------------ccchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCcc---cccc
Confidence            479999999997421             12334444    555555566666789999999988776532111   1111


Q ss_pred             ccCCCcccchhhHHHHHhh
Q 025705          227 RKYTSLMGYSGSKLAQVKL  245 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l  245 (249)
                      .+..+...|+.+|++.+.+
T Consensus       120 ~~~~~~~~y~~~k~~~e~~  138 (221)
T 3ew7_A          120 KGLREAPYYPTARAQAKQL  138 (221)
T ss_dssp             -----CCCSCCHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHH
Confidence            2223456799999998876

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.69  E-value=4.4e-17  Score=142.87  Aligned_cols=160  Identities=13%  Similarity=0.047  Sum_probs=111.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++++++||||+|+||.+++++|+++| ++|++++|+.....+.       ..   ...++.++.+|++|.++++++++
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-------l~---~~~~v~~~~~Dl~d~~~l~~~~~   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN-------VP---DHPAVRFSETSITDDALLASLQD   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG-------SC---CCTTEEEECSCTTCHHHHHHCCS
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh-------cc---CCCceEEEECCCCCHHHHHHHhh
Confidence            4677899999999999999999999999 9999999986432111       00   01368889999999987766543


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                             ++|++||+||....    ..+.++.++.+++|+.++..+++++..    . +.++||++||...+.... ...
T Consensus        99 -------~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~-~~~  162 (377)
T 2q1s_A           99 -------EYDYVFHLATYHGN----QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKT-FDD  162 (377)
T ss_dssp             -------CCSEEEECCCCSCH----HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC-----------
T ss_pred             -------CCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCC-CCC
Confidence                   79999999996431    123456788999999999999998743    3 446999999976554321 101


Q ss_pred             cccccccc---cC-CCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRR---KY-TSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~---~~-~~~~~Y~asKaal~~l~~~  248 (249)
                      ++. ++..   +. .+...|+.+|++.+.+++.
T Consensus       163 ~~~-~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~  194 (377)
T 2q1s_A          163 AKA-TEETDIVSLHNNDSPYSMSKIFGEFYSVY  194 (377)
T ss_dssp             -----CCCCCCCSSCCCSHHHHHHHHHHHHHHH
T ss_pred             cCc-ccccccccccCCCCchHHHHHHHHHHHHH
Confidence            110 0111   22 4567899999999998763

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.68  E-value=3.9e-16  Score=141.26  Aligned_cols=170  Identities=18%  Similarity=0.163  Sum_probs=115.9

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHc---CCEEEEEEcChHHHHHHHHHHHHhhcCC----------CCCCceEE
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAES---GAHVVMAVRNLKAANELIQKWQEEWSGK----------GLPLNIEA  124 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~---G~~Vil~~r~~~~~~~~~~~~~~~~~~~----------~~~~~v~~  124 (249)
                      .+....++++|+||||+|+||.+++++|+++   |++|++++|+.+... ..+++.+.....          ....++.+
T Consensus        66 ~~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~  144 (478)
T 4dqv_A           66 LPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEV  144 (478)
T ss_dssp             SCCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEE
T ss_pred             CCCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEE
Confidence            3445678899999999999999999999999   999999999876542 233333322210          00137899


Q ss_pred             EEccCC------CHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC
Q 025705          125 MELDLL------SLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS  198 (249)
Q Consensus       125 ~~~D~~------~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~  198 (249)
                      +.+|++      +.+.++++++       ++|++|||||....        +.+++.+++|+.++..+++++..    .+
T Consensus       145 v~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~  205 (478)
T 4dqv_A          145 VAGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TK  205 (478)
T ss_dssp             EECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SS
T ss_pred             EEeECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CC
Confidence            999999      5556666554       58999999997643        23346789999999999998754    34


Q ss_pred             CCeEEEEcCCccccCCCCcccccccccccc--------CCCcccchhhHHHHHhhhhc
Q 025705          199 PSRIINVNSVMHYVGFVDTEDMNVVSGRRK--------YTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       199 ~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~--------~~~~~~Y~asKaal~~l~~~  248 (249)
                      .++||++||...+... ....+.+.....+        ......|+.||.+.+.++++
T Consensus       206 ~~~~V~iSS~~v~~~~-~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  262 (478)
T 4dqv_A          206 LKPFTYVSTADVGAAI-EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLRE  262 (478)
T ss_dssp             CCCEEEEEEGGGGTTS-CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeehhhcCcc-CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHH
Confidence            4589999997654332 1111111110000        11235599999999998764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.68  E-value=3e-16  Score=133.84  Aligned_cols=145  Identities=16%  Similarity=0.172  Sum_probs=108.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++++||||+|+||.+++++|+++|++|++++|+....+ .              .++.++.+|++ .+++.++++    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~--------------~~~~~~~~Dl~-~~~~~~~~~----   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I--------------NDYEYRVSDYT-LEDLINQLN----   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------------CCEEEECCCC-HHHHHHHTT----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C--------------CceEEEEcccc-HHHHHHhhc----
Confidence            378999999999999999999999999999999843322 1              14688999999 887776654    


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         ++|++||+||.....        ..+..+++|+.++..+++++..    .+.+++|++||...+... ...+   ++
T Consensus        62 ---~~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~-~~~~---~~  122 (311)
T 3m2p_A           62 ---DVDAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDE-TSLP---WN  122 (311)
T ss_dssp             ---TCSEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCG-GGCS---BC
T ss_pred             ---CCCEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCC-CCCC---CC
Confidence               799999999976432        3345788999999988888743    345689999996655432 1111   23


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+..+...|+.+|.+.+.++++
T Consensus       123 E~~~~~p~~~Y~~sK~~~E~~~~~  146 (311)
T 3m2p_A          123 EKELPLPDLMYGVSKLACEHIGNI  146 (311)
T ss_dssp             TTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCchhHHHHHHHHHHHHH
Confidence            333445677899999999988764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.68  E-value=1.2e-16  Score=134.71  Aligned_cols=137  Identities=12%  Similarity=0.194  Sum_probs=108.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||.+++++|+++|++|++++|.                           .+|++|.+.+.++++..    
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------------~~D~~d~~~~~~~~~~~----   55 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------------LLDITNISQVQQVVQEI----   55 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------------TSCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------------ccCCCCHHHHHHHHHhc----
Confidence            79999999999999999999999999999982                           37999999999988875    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++||+||....    +...+.++..+++|+.++..+++++...    + .++|++||...+.+...    ..+++.
T Consensus        56 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~----~~~~E~  121 (287)
T 3sc6_A           56 -RPHIIIHCAAYTKV----DQAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRP----EGYDEF  121 (287)
T ss_dssp             -CCSEEEECCCCCCH----HHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCS----SCBCTT
T ss_pred             -CCCEEEECCcccCh----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCC----CCCCCC
Confidence             69999999997532    1123567889999999999999997543    2 48999999876644321    113333


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+...|+.+|.+.+.++++
T Consensus       122 ~~~~p~~~Y~~sK~~~E~~~~~  143 (287)
T 3sc6_A          122 HNPAPINIYGASKYAGEQFVKE  143 (287)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH
Confidence            4446678899999999998764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.68  E-value=1.8e-16  Score=136.70  Aligned_cols=155  Identities=12%  Similarity=0.005  Sum_probs=109.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~  143 (249)
                      ++++||||+|+||.+++++|+++ |++|++++|+.++.+...    .       ..++.++.+|++|. +.++++++   
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~-------~~~~~~~~~D~~~~~~~~~~~~~---   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N-------HPHFHFVEGDISIHSEWIEYHVK---   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----T-------CTTEEEEECCTTTCSHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----c-------CCCeEEEeccccCcHHHHHhhcc---
Confidence            36999999999999999999998 899999999876543211    0       13688999999984 55666554   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++||+||.....    ...++.++.+++|+.++..+.+++..    .+ ++||++||...+..... ..+++.
T Consensus        67 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~-~~~~e~  132 (345)
T 2bll_A           67 ----KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSD-KYFDED  132 (345)
T ss_dssp             ----HCSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCC-SSBCTT
T ss_pred             ----CCCEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCC-CCcCCc
Confidence                479999999975321    12345678899999999999888744    34 79999999766543211 111111


Q ss_pred             ccc---cc-CCCcccchhhHHHHHhhhhc
Q 025705          224 SGR---RK-YTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~---~~-~~~~~~Y~asKaal~~l~~~  248 (249)
                      ...   .+ ..+...|+.+|++.+.+++.
T Consensus       133 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  161 (345)
T 2bll_A          133 HSNLIVGPVNKPRWIYSVSKQLLDRVIWA  161 (345)
T ss_dssp             TCCCBCCCTTCGGGHHHHHHHHHHHHHHH
T ss_pred             ccccccCcccCcccccHHHHHHHHHHHHH
Confidence            100   00 12345899999999998753

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.64  E-value=2.2e-16  Score=136.53  Aligned_cols=159  Identities=12%  Similarity=0.076  Sum_probs=106.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ...+++++++||||+|+||.+++++|+++|++|++++|+.....+..+++    ..   ..++.++.+|+.+..      
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~---~~~~~~~~~D~~~~~------   88 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW----IG---HENFELINHDVVEPL------   88 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG----TT---CTTEEEEECCTTSCC------
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh----cc---CCceEEEeCccCChh------
Confidence            34567899999999999999999999999999999998643221111111    00   136788999998752      


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                            +.++|++||+||......    ..++.+..+++|+.++..+++++...    + .++|++||...+.... ...
T Consensus        89 ------~~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~-~~~  152 (343)
T 2b69_A           89 ------YIEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPE-VHP  152 (343)
T ss_dssp             ------CCCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCS-SSS
T ss_pred             ------hcCCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCC-CCC
Confidence                  357999999999753211    12345678999999999999987543    3 4899999976553321 111


Q ss_pred             cccc--cccccCCCcccchhhHHHHHhhhh
Q 025705          220 MNVV--SGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       220 ~~~~--~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      .++.  ....+..+...|+.||++.+.+++
T Consensus       153 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~  182 (343)
T 2b69_A          153 QSEDYWGHVNPIGPRACYDEGKRVAETMCY  182 (343)
T ss_dssp             BCTTCCCBCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CcccccccCCCCCCCCchHHHHHHHHHHHH
Confidence            1110  001233456789999999999875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.64  E-value=4.1e-16  Score=132.45  Aligned_cols=152  Identities=15%  Similarity=0.156  Sum_probs=108.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      +++||||+|+||.+++++|+++| ++|++++|+.....  ...+..          +. +.+|+++.+.++++++..  .
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----------~~-~~~d~~~~~~~~~~~~~~--~   65 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----------LN-IADYMDKEDFLIQIMAGE--E   65 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----------SC-CSEEEEHHHHHHHHHTTC--C
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----------ce-eccccccHHHHHHHHhcc--c
Confidence            38999999999999999999999 89999999765421  111111          12 568999888877765421  1


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      ++++|++||+||....      +.++.++.+++|+.++..+++++.+.    +. ++|++||...+.... ..   ..++
T Consensus        66 ~~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~-~~---~~~E  130 (310)
T 1eq2_A           66 FGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRT-SD---FIES  130 (310)
T ss_dssp             CSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCC-SC---BCSS
T ss_pred             cCCCcEEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCC-CC---CCCC
Confidence            2369999999997532      23456788999999999999987553    44 899999986654321 11   1222


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+...|+.+|.+.+.++++
T Consensus       131 ~~~~~p~~~Y~~sK~~~e~~~~~  153 (310)
T 1eq2_A          131 REYEKPLNVYGYSKFLFDEYVRQ  153 (310)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhHHHHHHHHHHHHH
Confidence            23335567899999999998764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.63  E-value=1.4e-15  Score=129.97  Aligned_cols=146  Identities=16%  Similarity=0.122  Sum_probs=106.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+++++||||+|+||.+++++|+++|++|++++|+.                          .+|++|.+++.+++++. 
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------------~~D~~d~~~~~~~~~~~-   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------------ELNLLDSRAVHDFFASE-   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------------TCCTTCHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------------cCCccCHHHHHHHHHhc-
Confidence            357899999999999999999999999999888762                          26999999998888764 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++||+||....   .....+..++.+++|+.++..+++++..    .+.+++|++||...+.+.. ...+++.
T Consensus        55 ----~~d~vih~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~-~~~~~E~  122 (321)
T 1e6u_A           55 ----RIDQVYLAAAKVGG---IVANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLA-KQPMAES  122 (321)
T ss_dssp             ----CCSEEEECCCCCCC---HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTC-CSSBCGG
T ss_pred             ----CCCEEEEcCeecCC---cchhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCC-CCCcCcc
Confidence                69999999996421   1123445678899999999999988754    3446999999987654321 1111111


Q ss_pred             ccc--ccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGR--RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~--~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..  ...|....|+.+|.+.+.+++.
T Consensus       123 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~  149 (321)
T 1e6u_A          123 ELLQGTLEPTNEPYAIAKIAGIKLCES  149 (321)
T ss_dssp             GTTSSCCCGGGHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCCCCccHHHHHHHHHHHHH
Confidence            100  1112246899999999988764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.63  E-value=5.1e-16  Score=130.85  Aligned_cols=144  Identities=14%  Similarity=0.047  Sum_probs=106.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++++||| +|+||.+++++|+++|++|++++|+.+.+                ..++.++.+|++|.+.+.++++   
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------------~~~~~~~~~Dl~d~~~~~~~~~---   61 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------------PAGVQTLIADVTRPDTLASIVH---   61 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------------CTTCCEEECCTTCGGGCTTGGG---
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------------ccCCceEEccCCChHHHHHhhc---
Confidence            357899999 59999999999999999999999986541                1367889999999988777654   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                         +++|++||+||..         .+..+..+++|+.++..+.+++.    +.+.+++|++||...+... ..   ...
T Consensus        62 ---~~~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~-~~---~~~  121 (286)
T 3gpi_A           62 ---LRPEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQE-VE---EWL  121 (286)
T ss_dssp             ---GCCSEEEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCC-CS---SEE
T ss_pred             ---CCCCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCC-CC---CCC
Confidence               3699999999963         24456778999999999988875    3455799999998665433 11   112


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+..+...|+.+|.+.+.+ ++
T Consensus       122 ~E~~~~~p~~~Y~~sK~~~E~~-~~  145 (286)
T 3gpi_A          122 DEDTPPIAKDFSGKRMLEAEAL-LA  145 (286)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHH-GG
T ss_pred             CCCCCCCCCChhhHHHHHHHHH-Hh
Confidence            3334445678899999999988 54

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.63  E-value=1.1e-15  Score=129.24  Aligned_cols=140  Identities=16%  Similarity=0.137  Sum_probs=107.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++||||+|+||.+++++|+ +|++|++++|+..                       .+.+|++|.+++.++++..    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------------~~~~D~~d~~~~~~~~~~~----   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------------EFCGDFSNPKGVAETVRKL----   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------------SSCCCTTCHHHHHHHHHHH----
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------------cccccCCCHHHHHHHHHhc----
Confidence            58999999999999999999 8999999999751                       2368999999998888764    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++||+||.....    ...++.++.+++|+.++..+.+++...    + .++|++||...+.+... ..   +++.
T Consensus        54 -~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~vy~~~~~-~~---~~E~  119 (299)
T 1n2s_A           54 -RPDVIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANET----G-AWVVHYSTDYVFPGTGD-IP---WQET  119 (299)
T ss_dssp             -CCSEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTTT----T-CEEEEEEEGGGSCCCTT-CC---BCTT
T ss_pred             -CCCEEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEecccEEeCCCC-CC---CCCC
Confidence             699999999964311    123456788999999999999987442    3 38999999876654321 11   2222


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+...|+.+|++.+.++++
T Consensus       120 ~~~~p~~~Y~~sK~~~E~~~~~  141 (299)
T 1n2s_A          120 DATSPLNVYGKTKLAGEKALQD  141 (299)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHH
Confidence            3334567899999999998764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.62  E-value=1.9e-15  Score=127.10  Aligned_cols=128  Identities=16%  Similarity=0.157  Sum_probs=99.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAES--GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++++||||+|+||.+++++|+++  |++|++++|+.++.++.    ..        ..+.++.+|++|.+++.++++   
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l----~~--------~~~~~~~~D~~d~~~l~~~~~---   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL----AD--------QGVEVRHGDYNQPESLQKAFA---   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH----HH--------TTCEEEECCTTCHHHHHHHTT---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH----hh--------cCCeEEEeccCCHHHHHHHHh---
Confidence            46999999999999999999999  99999999987655432    11        246788999999988877654   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++||+||..    .   . +      ++|+.++..+.+++    .+.+.++||++||..+..           
T Consensus        66 ----~~d~vi~~a~~~----~---~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~-----------  112 (287)
T 2jl1_A           66 ----GVSKLLFISGPH----Y---D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE-----------  112 (287)
T ss_dssp             ----TCSEEEECCCCC----S---C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG-----------
T ss_pred             ----cCCEEEEcCCCC----c---C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC-----------
Confidence                589999999952    1   1 1      57888888887776    344556999999986531           


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ....|+.+|.+.+.++++
T Consensus       113 -------~~~~y~~~K~~~E~~~~~  130 (287)
T 2jl1_A          113 -------SIIPLAHVHLATEYAIRT  130 (287)
T ss_dssp             -------CCSTHHHHHHHHHHHHHH
T ss_pred             -------CCCchHHHHHHHHHHHHH
Confidence                   113799999999998764

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.60  E-value=2.2e-15  Score=141.31  Aligned_cols=157  Identities=12%  Similarity=-0.006  Sum_probs=111.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH-HHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS-VVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~  140 (249)
                      +++++++||||+|+||.+++++|+++ |++|++++|+....+...       .    ..++.++.+|++|.++ ++++++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~----~~~v~~v~~Dl~d~~~~~~~~~~  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------N----HPHFHFVEGDISIHSEWIEYHVK  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------T----CTTEEEEECCTTTCHHHHHHHHH
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------c----CCceEEEECCCCCcHHHHHHhhc
Confidence            46789999999999999999999998 899999999875432210       0    1368889999999764 555544


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                             ++|++|||||.....    ...++.++.+++|+.++..+.+++..    .+ +++|++||...+.+... ..+
T Consensus       382 -------~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~-~~~  444 (660)
T 1z7e_A          382 -------KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSD-KYF  444 (660)
T ss_dssp             -------HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCS-SSB
T ss_pred             -------CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCC-ccc
Confidence                   589999999975321    12345678999999999999888754    34 79999999876543211 111


Q ss_pred             cccccc----ccCCCcccchhhHHHHHhhhh
Q 025705          221 NVVSGR----RKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 ~~~~~~----~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ++.+..    ....+...|+.||++.+.+++
T Consensus       445 ~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~  475 (660)
T 1z7e_A          445 DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIW  475 (660)
T ss_dssp             CTTTCCEEECCTTCTTHHHHHHHHHHHHHHH
T ss_pred             CCCccccccCcccCCCCCcHHHHHHHHHHHH
Confidence            111100    001344579999999999875

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.60  E-value=3.4e-15  Score=126.66  Aligned_cols=151  Identities=13%  Similarity=0.030  Sum_probs=104.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++++++||||+|+||.+++++|+++|+      +..                 .....+..+.+|++|.+.+.++++.
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------------~~~~~~~~~~~D~~d~~~~~~~~~~   59 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-----------------EDWVFVSSKDADLTDTAQTRALFEK   59 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------------CEEEECCTTTCCTTSHHHHHHHHHH
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------------ccccccCceecccCCHHHHHHHHhh
Confidence            35678999999999999999999999998      110                 0001334457899999999888875


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      .     ++|++||+||....   ...+.+..+..+++|+.++..+.+++..    .+.+++|++||...+... ...+++
T Consensus        60 ~-----~~d~Vih~A~~~~~---~~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~-~~~~~~  126 (319)
T 4b8w_A           60 V-----QPTHVIHLAAMVGG---LFRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDK-TTYPID  126 (319)
T ss_dssp             S-----CCSEEEECCCCCCC---HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSS-CCSSBC
T ss_pred             c-----CCCEEEECceeccc---ccccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCC-CCCCcc
Confidence            2     69999999997421   1122345677899999999999988743    344689999998655432 221222


Q ss_pred             ccccc--ccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGR--RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~--~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +....  ...|....|+.||.+.+.+++.
T Consensus       127 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~  155 (319)
T 4b8w_A          127 ETMIHNGPPHNSNFGYSYAKRMIDVQNRA  155 (319)
T ss_dssp             GGGGGBSCCCSSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCCCcchHHHHHHHHHHHHHH
Confidence            21110  2223334699999999988753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.58  E-value=2.3e-14  Score=124.68  Aligned_cols=134  Identities=18%  Similarity=0.082  Sum_probs=97.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEcc-CCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD-LLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~~v~~~~~~~  142 (249)
                      .+++++||||+|+||++++++|+++|++|++++|+.++..  .+++..   .    ..+.++.+| ++|.+++.++++  
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~----~~v~~v~~D~l~d~~~l~~~~~--   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---I----PNVTLFQGPLLNNVPLMDTLFE--   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---S----TTEEEEESCCTTCHHHHHHHHT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---c----CCcEEEECCccCCHHHHHHHHh--
Confidence            3578999999999999999999999999999999876542  122221   0    257888999 999998887654  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCc-cccCCCCcccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVM-HYVGFVDTEDM  220 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~-~~~~~~~~~~~  220 (249)
                           .+|++|||++....               +.|..+     +.+++.+++.+ .++||++||.. +..+.      
T Consensus        73 -----~~d~Vi~~a~~~~~---------------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~~------  121 (352)
T 1xgk_A           73 -----GAHLAFINTTSQAG---------------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYGP------  121 (352)
T ss_dssp             -----TCSEEEECCCSTTS---------------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTSS------
T ss_pred             -----cCCEEEEcCCCCCc---------------HHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccCC------
Confidence                 58999999875310               123332     44445555555 57999999986 23332      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|+.||++.+.++++
T Consensus       122 ---------~~~~~y~~sK~~~E~~~~~  140 (352)
T 1xgk_A          122 ---------WPAVPMWAPKFTVENYVRQ  140 (352)
T ss_dssp             ---------CCCCTTTHHHHHHHHHHHT
T ss_pred             ---------CCCccHHHHHHHHHHHHHH
Confidence                     3446799999999999875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.57  E-value=5.4e-15  Score=134.58  Aligned_cols=162  Identities=17%  Similarity=0.121  Sum_probs=110.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH---HHHHHHHHHHhhc---CCCCCCceEEEEccCCCHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA---ANELIQKWQEEWS---GKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~---~~~~~~~~~~~~~---~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .++|+||||+|+||.+++++|.++|++|++++|+..+   .+...+.+.....   ......++.++.+|+++.+.+.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4789999999999999999999999999999998763   2233333222100   0001147899999999987776  


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC---
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV---  215 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~---  215 (249)
                            ...++|++|||||...       ....++..+++|+.++..+++++..     +..++|++||...  |..   
T Consensus       228 ------~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v--G~~~~~  287 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV--GTYFDI  287 (508)
T ss_dssp             ------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT--TSEECT
T ss_pred             ------CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh--ccCCcc
Confidence                  3458999999999753       1235677889999999999998755     3469999999877  221   


Q ss_pred             --CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 --DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 --~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                        ....+.+.+......+...|+.||.+.+.++++
T Consensus       288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~  322 (508)
T 4f6l_B          288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLE  322 (508)
T ss_dssp             TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHH
T ss_pred             CCcCcccccccccccccCCCcHHHHHHHHHHHHHH
Confidence              011111111111223677899999999988764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.57  E-value=2.1e-14  Score=121.64  Aligned_cols=138  Identities=14%  Similarity=-0.002  Sum_probs=97.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .++++||||+|+||.+++++|+++| ++|++++|++++...  +.+..        ..+.++.+|++|.+++.++++   
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--------~~~~~~~~D~~d~~~l~~~~~---   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--------QGAEVVQGDQDDQVIMELALN---   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--------TTCEEEECCTTCHHHHHHHHT---
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--------CCCEEEEecCCCHHHHHHHHh---
Confidence            4789999999999999999999999 999999999765421  22222        247788999999998877664   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++|||+|.....     .       .+.|+.    .++.+++.+++.+.++||++|+. +..+..        
T Consensus        72 ----~~d~vi~~a~~~~~~-----~-------~~~~~~----~~~~~~~aa~~~gv~~iv~~S~~-~~~~~~--------  122 (299)
T 2wm3_A           72 ----GAYATFIVTNYWESC-----S-------QEQEVK----QGKLLADLARRLGLHYVVYSGLE-NIKKLT--------  122 (299)
T ss_dssp             ----TCSEEEECCCHHHHT-----C-------HHHHHH----HHHHHHHHHHHHTCSEEEECCCC-CHHHHT--------
T ss_pred             ----cCCEEEEeCCCCccc-----c-------chHHHH----HHHHHHHHHHHcCCCEEEEEcCc-cccccC--------
Confidence                589999999853210     0       123433    44555555666666799996554 333210        


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          .......|+.+|.+++.+.++
T Consensus       123 ----~~~~~~~y~~sK~~~e~~~~~  143 (299)
T 2wm3_A          123 ----AGRLAAAHFDGKGEVEEYFRD  143 (299)
T ss_dssp             ----TTSCCCHHHHHHHHHHHHHHH
T ss_pred             ----CCcccCchhhHHHHHHHHHHH
Confidence                002346799999999998764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.55  E-value=1.1e-14  Score=122.28  Aligned_cols=125  Identities=14%  Similarity=0.095  Sum_probs=91.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAES--GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++||||+|+||.+++++|+++  |++|++++|++++.+..    ..        ..+.++.+|++|.+++.++++    
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----~~--------~~~~~~~~D~~d~~~~~~~~~----   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL----AA--------QGITVRQADYGDEAALTSALQ----   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH----HH--------TTCEEEECCTTCHHHHHHHTT----
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh----hc--------CCCeEEEcCCCCHHHHHHHHh----
Confidence            3899999999999999999998  99999999987654432    11        246788999999988877654    


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         ++|++||+||...                +.|+.++..+.+++    .+.+.++||++||..++ ..          
T Consensus        65 ---~~d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~-~~----------  110 (286)
T 2zcu_A           65 ---GVEKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD-TS----------  110 (286)
T ss_dssp             ---TCSEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT-TC----------
T ss_pred             ---CCCEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC-CC----------
Confidence               5899999998521                12555655555554    44455799999998764 11          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           +  ..|+.+|.+.+.++++
T Consensus       111 -----~--~~y~~sK~~~e~~~~~  127 (286)
T 2zcu_A          111 -----P--LGLADEHIETEKMLAD  127 (286)
T ss_dssp             -----C--STTHHHHHHHHHHHHH
T ss_pred             -----c--chhHHHHHHHHHHHHH
Confidence                 2  3799999999998763

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.52  E-value=1.9e-15  Score=128.79  Aligned_cols=152  Identities=16%  Similarity=0.044  Sum_probs=98.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+++++||||+|+||.+++++|+++|++|++++|+........+.+....    ...++.++.+|++            
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL----EKPVLELEERDLS------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE----CSCGGGCCHHHHT------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc----cCCCeeEEeCccc------------
Confidence            456899999999999999999999999999999997641000000000000    0013444455554            


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                           ++|++||+||........    +.....++ |+.++..+.+++...    +.++||++||...+.... .   ..
T Consensus        69 -----~~d~vi~~a~~~~~~~~~----~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~-~---~~  130 (321)
T 3vps_A           69 -----DVRLVYHLASHKSVPRSF----KQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQAD-T---LP  130 (321)
T ss_dssp             -----TEEEEEECCCCCCHHHHT----TSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCS-S---SS
T ss_pred             -----cCCEEEECCccCChHHHH----hCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCC-C---CC
Confidence                 699999999975421111    11223455 999999888887543    346999999987655431 1   11


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .++..+..+...|+.+|.+.+.++++
T Consensus       131 ~~E~~~~~p~~~Y~~sK~~~E~~~~~  156 (321)
T 3vps_A          131 TPEDSPLSPRSPYAASKVGLEMVAGA  156 (321)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHH
Confidence            23334445678899999999988764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.50  E-value=1.6e-13  Score=116.39  Aligned_cols=133  Identities=14%  Similarity=0.148  Sum_probs=90.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-------HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-------KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      +++++||||+|+||.+++++|+++|++|++++|+.       ++.+.. +++..        ..+.++.+|++|.+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--------~~v~~v~~D~~d~~~l~~   72 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--------LGVILLEGDINDHETLVK   72 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--------TTCEEEECCTTCHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--------CCCEEEEeCCCCHHHHHH
Confidence            46799999999999999999999999999999986       444332 23322        257889999999998877


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++       ++|++||++|...                   +.+...++++    +++.+ -+++|  .|..+....  
T Consensus        73 ~~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v--~S~~g~~~~--  118 (307)
T 2gas_A           73 AIK-------QVDIVICAAGRLL-------------------IEDQVKIIKA----IKEAGNVKKFF--PSEFGLDVD--  118 (307)
T ss_dssp             HHT-------TCSEEEECSSSSC-------------------GGGHHHHHHH----HHHHCCCSEEE--CSCCSSCTT--
T ss_pred             HHh-------CCCEEEECCcccc-------------------cccHHHHHHH----HHhcCCceEEe--ecccccCcc--
Confidence            665       5899999999642                   2233334444    44444 46776  343332110  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                        .     .....|....| .+|++++.+.++
T Consensus       119 --~-----~~~~~p~~~~y-~sK~~~e~~~~~  142 (307)
T 2gas_A          119 --R-----HDAVEPVRQVF-EEKASIRRVIEA  142 (307)
T ss_dssp             --S-----CCCCTTHHHHH-HHHHHHHHHHHH
T ss_pred             --c-----ccCCCcchhHH-HHHHHHHHHHHH
Confidence              0     00112345679 999999988763

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.48  E-value=2.9e-13  Score=113.75  Aligned_cols=133  Identities=14%  Similarity=0.034  Sum_probs=94.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++|||| |.||.+++++|+++|++|++++|+..+.....    .        ..+.++.+|++|.+            
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--------~~~~~~~~D~~d~~------------   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A--------SGAEPLLWPGEEPS------------   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H--------TTEEEEESSSSCCC------------
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h--------CCCeEEEecccccc------------
Confidence            68999998 99999999999999999999999987654432    2        25889999999833            


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc--CCCCeEEEEcCCccccCCCCccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR--GSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~--~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      ..++|++||+||.....     .  ..              ++.++..+.+  .+.+++|++||...+... ..   ...
T Consensus        61 ~~~~d~vi~~a~~~~~~-----~--~~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~-~~---~~~  115 (286)
T 3ius_A           61 LDGVTHLLISTAPDSGG-----D--PV--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDH-DG---AWV  115 (286)
T ss_dssp             CTTCCEEEECCCCBTTB-----C--HH--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCC-TT---CEE
T ss_pred             cCCCCEEEECCCccccc-----c--HH--------------HHHHHHHHHhhcCCceEEEEeecceecCCC-CC---CCc
Confidence            35799999999965321     0  10              1333344444  345699999997655432 11   122


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+..+...|+.+|.+.+.++++
T Consensus       116 ~E~~~~~p~~~Y~~sK~~~E~~~~~  140 (286)
T 3ius_A          116 DETTPLTPTAARGRWRVMAEQQWQA  140 (286)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHh
Confidence            3334445667899999999998764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.48  E-value=6.9e-13  Score=114.69  Aligned_cols=137  Identities=10%  Similarity=0.059  Sum_probs=98.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh----HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL----KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +..++++||||+|+||++++++|+++|++|++++|+.    ++.+ ..+++..        ..+.++.+|++|.+++.++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--------~~v~~~~~Dl~d~~~l~~~   78 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--------KGAIIVYGLINEQEAMEKI   78 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--------TTCEEEECCTTCHHHHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--------CCcEEEEeecCCHHHHHHH
Confidence            4457899999999999999999999999999999986    2322 2223322        3688999999999999988


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++.     ++|++||++|..                   |+.++..+++++..    .+ -.++|+ |+ .+..     
T Consensus        79 ~~~~-----~~d~Vi~~a~~~-------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~-~g~~-----  123 (346)
T 3i6i_A           79 LKEH-----EIDIVVSTVGGE-------------------SILDQIALVKAMKA----VGTIKRFLP-SE-FGHD-----  123 (346)
T ss_dssp             HHHT-----TCCEEEECCCGG-------------------GGGGHHHHHHHHHH----HCCCSEEEC-SC-CSSC-----
T ss_pred             HhhC-----CCCEEEECCchh-------------------hHHHHHHHHHHHHH----cCCceEEee-cc-cCCC-----
Confidence            8763     699999999962                   77777777777643    33 346664 33 2211     


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           .++..+.++...|+.+|.+++.+.++
T Consensus       124 -----~~e~~~~~p~~~y~~sK~~~e~~l~~  149 (346)
T 3i6i_A          124 -----VNRADPVEPGLNMYREKRRVRQLVEE  149 (346)
T ss_dssp             -----TTTCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred             -----CCccCcCCCcchHHHHHHHHHHHHHH
Confidence                 01122235667899999999988764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.47  E-value=1.9e-13  Score=116.76  Aligned_cols=133  Identities=12%  Similarity=0.076  Sum_probs=88.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-H----HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-K----AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~----~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++||||+|+||.+++++|+++|++|++++|+. .    ...+..+++..        ..+.++.+|++|.+++.++++
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--------~~v~~v~~D~~d~~~l~~a~~   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--------MGVTIIEGEMEEHEKMVSVLK   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--------TTCEEEECCTTCHHHHHHHHT
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--------CCcEEEEecCCCHHHHHHHHc
Confidence            6799999999999999999999999999999986 1    11122222222        257889999999998877765


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                             ++|++||++|...                   +.++    +.+++.+.+.+ -++||  .|..+....     
T Consensus        77 -------~~d~vi~~a~~~~-------------------~~~~----~~l~~aa~~~g~v~~~v--~S~~g~~~~-----  119 (321)
T 3c1o_A           77 -------QVDIVISALPFPM-------------------ISSQ----IHIINAIKAAGNIKRFL--PSDFGCEED-----  119 (321)
T ss_dssp             -------TCSEEEECCCGGG-------------------SGGG----HHHHHHHHHHCCCCEEE--CSCCSSCGG-----
T ss_pred             -------CCCEEEECCCccc-------------------hhhH----HHHHHHHHHhCCccEEe--ccccccCcc-----
Confidence                   4899999998632                   2223    33344445444 46777  343321110     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                        .  .....|....| .+|++++.++++
T Consensus       120 --~--~~~~~p~~~~y-~sK~~~e~~~~~  143 (321)
T 3c1o_A          120 --R--IKPLPPFESVL-EKKRIIRRAIEA  143 (321)
T ss_dssp             --G--CCCCHHHHHHH-HHHHHHHHHHHH
T ss_pred             --c--cccCCCcchHH-HHHHHHHHHHHH
Confidence              0  00011235679 999999988763

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.47  E-value=1.7e-14  Score=122.07  Aligned_cols=109  Identities=18%  Similarity=0.199  Sum_probs=86.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||+++||||+||+|+++++.|+++|++|++++|+.+++++..+++....       .+.++.+|+++.++++++++ 
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~-  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-------KVNVTAAETADDASRAEAVK-  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-------TCCCEEEECCSHHHHHHHTT-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEecCCCHHHHHHHHH-
Confidence            4688999999999999999999999999999999999998888887775521       34567899999988776554 


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCH-HHHHHHHHhhhhHHH
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSK-DGYEEHMQVNHLAPA  184 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~-~~~~~~~~vN~~~~~  184 (249)
                            .+|++|||+|... ..+..+.+. +.++..+++|+.+++
T Consensus       188 ------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ------hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence                  4799999998642 222223333 566678899999877

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.44  E-value=2.4e-13  Score=116.16  Aligned_cols=133  Identities=13%  Similarity=0.080  Sum_probs=88.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++||||+|+||.+++++|+++|++|++++|+.....+..+++..        ..+.++.+|++|.+++.++++     
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--------~~v~~v~~Dl~d~~~l~~a~~-----   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--------LGAIIVKGELDEHEKLVELMK-----   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--------TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--------CCCEEEEecCCCHHHHHHHHc-----
Confidence            5799999999999999999999999999999987522222222322        257889999999998887765     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                        ++|++||++|...                   +.+.    +.+++.+++.+ .++||+  |..+....    .     
T Consensus        79 --~~d~vi~~a~~~~-------------------~~~~----~~l~~aa~~~g~v~~~v~--S~~g~~~~----~-----  122 (318)
T 2r6j_A           79 --KVDVVISALAFPQ-------------------ILDQ----FKILEAIKVAGNIKRFLP--SDFGVEED----R-----  122 (318)
T ss_dssp             --TCSEEEECCCGGG-------------------STTH----HHHHHHHHHHCCCCEEEC--SCCSSCTT----T-----
T ss_pred             --CCCEEEECCchhh-------------------hHHH----HHHHHHHHhcCCCCEEEe--eccccCcc----c-----
Confidence              5899999998631                   2222    33344445444 567774  33221110    0     


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .....|....| .+|.+++.+.++
T Consensus       123 ~~~~~p~~~~y-~sK~~~e~~~~~  145 (318)
T 2r6j_A          123 INALPPFEALI-ERKRMIRRAIEE  145 (318)
T ss_dssp             CCCCHHHHHHH-HHHHHHHHHHHH
T ss_pred             ccCCCCcchhH-HHHHHHHHHHHh
Confidence            00011234578 999999988764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.43  E-value=2.7e-12  Score=109.10  Aligned_cols=138  Identities=14%  Similarity=0.087  Sum_probs=93.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-----HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-----KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++||||+|+||.+++++|+++|++|++++|+.     ++.+.. +++..        ..+.++.+|++|.+++.+++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~--------~~~~~~~~D~~d~~~l~~~~   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFKQ--------LGAKLIEASLDDHQRLVDAL   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHHT--------TTCEEECCCSSCHHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHHh--------CCeEEEeCCCCCHHHHHHHH
Confidence            36799999999999999999999999999999984     332221 22221        25788999999999887776


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +       ++|++||++|.....               .|+.++..+++++    ++.+ -++||+  |..+....    
T Consensus        75 ~-------~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~----  122 (313)
T 1qyd_A           75 K-------QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP--SEFGMDPD----  122 (313)
T ss_dssp             T-------TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC--SCCSSCTT----
T ss_pred             h-------CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe--cCCcCCcc----
Confidence            4       589999999975321               2555655555554    4444 568874  33321110    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+    .....|....| .+|.+++.+.++
T Consensus       123 ~~----~~~~~p~~~~y-~sK~~~e~~~~~  147 (313)
T 1qyd_A          123 IM----EHALQPGSITF-IDKRKVRRAIEA  147 (313)
T ss_dssp             SC----CCCCSSTTHHH-HHHHHHHHHHHH
T ss_pred             cc----ccCCCCCcchH-HHHHHHHHHHHh
Confidence            00    00111445678 999999988764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.40  E-value=1.4e-12  Score=110.63  Aligned_cols=137  Identities=14%  Similarity=0.100  Sum_probs=88.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHH--HHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAA--NELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++++||||+|+||.+++++|+++|++|++++|+....  .+..+.+.. ...    ..+.++.+|++|.+++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~-l~~----~~v~~v~~D~~d~~~l~~~~~--   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLES-FKA----SGANIVHGSIDDHASLVEAVK--   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHH-HHT----TTCEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHH-HHh----CCCEEEEeccCCHHHHHHHHc--
Confidence            36799999999999999999999999999999984321  111111111 111    257889999999998887765  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                           ++|++||++|...                   +.+...++    +.+++.+ -+++|+ |+ .+....       
T Consensus        77 -----~~d~vi~~a~~~~-------------------~~~~~~l~----~aa~~~g~v~~~v~-S~-~g~~~~-------  119 (308)
T 1qyc_A           77 -----NVDVVISTVGSLQ-------------------IESQVNII----KAIKEVGTVKRFFP-SE-FGNDVD-------  119 (308)
T ss_dssp             -----TCSEEEECCCGGG-------------------SGGGHHHH----HHHHHHCCCSEEEC-SC-CSSCTT-------
T ss_pred             -----CCCEEEECCcchh-------------------hhhHHHHH----HHHHhcCCCceEee-cc-cccCcc-------
Confidence                 4899999998631                   22233333    3344444 467773 33 321110       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .  .....|....| .+|++++.+.++
T Consensus       120 ~--~~~~~p~~~~y-~sK~~~e~~~~~  143 (308)
T 1qyc_A          120 N--VHAVEPAKSVF-EVKAKVRRAIEA  143 (308)
T ss_dssp             S--CCCCTTHHHHH-HHHHHHHHHHHH
T ss_pred             c--cccCCcchhHH-HHHHHHHHHHHh
Confidence            0  00111335678 999999988763

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.40  E-value=1.7e-12  Score=118.42  Aligned_cols=143  Identities=20%  Similarity=0.177  Sum_probs=99.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++||||||+|+||.+++++|+++|++|++++|+..+.                    ..+.+|+.+..         .+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------------~~v~~d~~~~~---------~~  197 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------------GKRFWDPLNPA---------SD  197 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------------TCEECCTTSCC---------TT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------------cceeecccchh---------HH
Confidence            57899999999999999999999999999999986532                    12456776431         22


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      .+.++|++||+||.....   ..+.+..+..+++|+.++..+++++.   .+.+.++||++||...+......   ..++
T Consensus       198 ~l~~~D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~---~~~~  268 (516)
T 3oh8_A          198 LLDGADVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGD---EILT  268 (516)
T ss_dssp             TTTTCSEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEE---EEEC
T ss_pred             hcCCCCEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCC---CccC
Confidence            345799999999975432   34567788899999999999999743   33455699999997755411111   1122


Q ss_pred             ccccCCCcccchhhHHHHHhhh
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~  246 (249)
                      +..+ .+...|+.+|...+.+.
T Consensus       269 E~~~-~~~~~y~~~~~~~E~~~  289 (516)
T 3oh8_A          269 EESE-SGDDFLAEVCRDWEHAT  289 (516)
T ss_dssp             TTSC-CCSSHHHHHHHHHHHTT
T ss_pred             CCCC-CCcChHHHHHHHHHHHH
Confidence            2222 25567888888766554

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.39  E-value=1.1e-12  Score=113.79  Aligned_cols=119  Identities=15%  Similarity=0.075  Sum_probs=92.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-----CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESG-----AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G-----~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++++||||+|+||.+++++|+++|     ++|++++|+.....         .    ...++.++.+|++|.+++.+++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~----~~~~~~~~~~Dl~d~~~~~~~~   67 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------H----EDNPINYVQCDISDPDDSQAKL   67 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------C----CSSCCEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------c----ccCceEEEEeecCCHHHHHHHH
Confidence            4689999999999999999999999     99999999865422         0    0136788999999999887766


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEE-------EEcCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRII-------NVNSVMHY  211 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv-------~vsS~~~~  211 (249)
                      +.    .+++|++||+||...         +..+..+++|+.++..+++++.+...  +-.++|       ++||...+
T Consensus        68 ~~----~~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vy  131 (364)
T 2v6g_A           68 SP----LTDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESY  131 (364)
T ss_dssp             TT----CTTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGT
T ss_pred             hc----CCCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhc
Confidence            53    224999999999642         24577889999999999999876521  223665       68887554

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.34  E-value=1.9e-12  Score=108.95  Aligned_cols=106  Identities=17%  Similarity=0.168  Sum_probs=80.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      +++||||+|+||++++++|+++ |++|++++|++++....    .    .    ..+.++.+|++|.+++.++++     
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~----~----~~v~~~~~D~~d~~~l~~~~~-----   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W----R----GKVSVRQLDYFNQESMVEAFK-----   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G----B----TTBEEEECCTTCHHHHHHHTT-----
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h----h----CCCEEEEcCCCCHHHHHHHHh-----
Confidence            4899999999999999999998 99999999998754321    1    1    368899999999998877654     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                        ++|++|||||....       .       ..|+.+    ++.+++.+++.+-++||++||..
T Consensus        65 --~~d~vi~~a~~~~~-------~-------~~~~~~----~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           65 --GMDTVVFIPSIIHP-------S-------FKRIPE----VENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             --TCSEEEECCCCCCS-------H-------HHHHHH----HHHHHHHHHHTTCCEEEEEEESC
T ss_pred             --CCCEEEEeCCCCcc-------c-------hhhHHH----HHHHHHHHHHcCCCEEEEEcccC
Confidence              68999999986421       0       124444    34555556666667999999964

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.32  E-value=3.2e-12  Score=111.43  Aligned_cols=113  Identities=16%  Similarity=0.141  Sum_probs=88.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      +++||||+|+||++++++|+++|+ +|+..+|+                               +|.++++++++     
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------------~d~~~l~~~~~-----   45 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------------TKEEELESALL-----   45 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------------CCHHHHHHHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------------CCHHHHHHHhc-----
Confidence            589999999999999999999998 77666553                               56777777766     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                        ++|++||+||....        +..+..+++|+.++..+++++..    .+. .++|++||...+.            
T Consensus        46 --~~d~Vih~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~~------------   99 (369)
T 3st7_A           46 --KADFIVHLAGVNRP--------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQATQ------------   99 (369)
T ss_dssp             --HCSEEEECCCSBCT--------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGGS------------
T ss_pred             --cCCEEEECCcCCCC--------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhcC------------
Confidence              38999999997542        23345678999999999988743    333 3899999976542            


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             ...|+.+|++.+.++++
T Consensus       100 -------~~~Y~~sK~~~E~~~~~  116 (369)
T 3st7_A          100 -------DNPYGESKLQGEQLLRE  116 (369)
T ss_dssp             -------CSHHHHHHHHHHHHHHH
T ss_pred             -------CCCchHHHHHHHHHHHH
Confidence                   45799999999988764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.19  E-value=6.3e-11  Score=96.19  Aligned_cols=82  Identities=17%  Similarity=0.242  Sum_probs=62.1

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEE
Q 025705           62 PVNDLTCIVTGS----------------TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM  125 (249)
Q Consensus        62 ~~~~~~vlItGa----------------s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~  125 (249)
                      ++.||+||||||                |||||+++|++|+++|++|++++++.. ++         .+     ..+  .
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~-----~g~--~   67 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TP-----PFV--K   67 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CC-----TTE--E
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cC-----CCC--e
Confidence            588999999999                689999999999999999999988642 10         00     112  2


Q ss_pred             EccCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCC
Q 025705          126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGE  163 (249)
Q Consensus       126 ~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~  163 (249)
                      .+|+++.++   +++.+.+.++++|++|||||+....+
T Consensus        68 ~~dv~~~~~---~~~~v~~~~~~~Dili~~Aav~d~~p  102 (226)
T 1u7z_A           68 RVDVMTALE---MEAAVNASVQQQNIFIGCAAVADYRA  102 (226)
T ss_dssp             EEECCSHHH---HHHHHHHHGGGCSEEEECCBCCSEEE
T ss_pred             EEccCcHHH---HHHHHHHhcCCCCEEEECCcccCCCC
Confidence            468877554   45566666789999999999875443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.07  E-value=3.9e-09  Score=89.04  Aligned_cols=139  Identities=17%  Similarity=0.143  Sum_probs=88.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .||||||+|.||.+++++|.++|++|+++.|++..                  .++   ..|     .+   .   .+..
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------------~~~---~~~-----~~---~---~~~l   49 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------------GRI---TWD-----EL---A---ASGL   49 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------------TEE---EHH-----HH---H---HHCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------------Cee---ecc-----hh---h---Hhhc
Confidence            48999999999999999999999999999997531                  111   111     11   1   1234


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      .++|.+||.||..........+.+..+..++.|+.++-.+.+++...  +.+...+|+.||...+... ....   .++.
T Consensus        50 ~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~-~~~~---~~E~  123 (298)
T 4b4o_A           50 PSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPS-LTAE---YDED  123 (298)
T ss_dssp             CSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCC-SSCC---BCTT
T ss_pred             cCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCC-CCCc---cccc
Confidence            57999999998654444445567777888999999888877765332  1223457777776555432 2111   2222


Q ss_pred             ccCCCcccchhhHHHHH
Q 025705          227 RKYTSLMGYSGSKLAQV  243 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~  243 (249)
                      .+..+...|+..|..-+
T Consensus       124 ~p~~~~~~~~~~~~~~e  140 (298)
T 4b4o_A          124 SPGGDFDFFSNLVTKWE  140 (298)
T ss_dssp             CCCSCSSHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHH
Confidence            33344444555554433

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.05  E-value=6.2e-11  Score=96.44  Aligned_cols=84  Identities=17%  Similarity=0.212  Sum_probs=59.8

Q ss_pred             CCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEc
Q 025705           64 NDLTCIVTGS----------------TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL  127 (249)
Q Consensus        64 ~~~~vlItGa----------------s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  127 (249)
                      .||+||||||                ||++|.++|++|+++|++|++++|+... ..          .  ....+..  .
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~----------~--~~~~~~~--~   66 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP----------E--PHPNLSI--R   66 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC----------C--CCTTEEE--E
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc----------c--CCCCeEE--E
Confidence            5899999999                7789999999999999999999997421 00          0  0012222  3


Q ss_pred             cCCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCC
Q 025705          128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQ  165 (249)
Q Consensus       128 D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~  165 (249)
                      |+.   +++++++.+.+.++++|++|+|||+....+..
T Consensus        67 ~v~---s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~  101 (232)
T 2gk4_A           67 EIT---NTKDLLIEMQERVQDYQVLIHSMAVSDYTPVY  101 (232)
T ss_dssp             ECC---SHHHHHHHHHHHGGGCSEEEECSBCCSEEEEE
T ss_pred             EHh---HHHHHHHHHHHhcCCCCEEEEcCccccccchh
Confidence            444   45556666666678899999999987554443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.92  E-value=3.1e-09  Score=91.28  Aligned_cols=151  Identities=11%  Similarity=0.016  Sum_probs=94.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      ..++||||+|.||.+++..|+++|.       +|+++++..  ++.+....++...        .+.++ .|+.+.+++.
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--------~~~~~-~di~~~~~~~   75 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--------AFPLL-AGLEATDDPK   75 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--------TCTTE-EEEEEESCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--------ccccc-CCeEeccChH
Confidence            4699999999999999999999996       899999875  2333333333220        11112 4665544443


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +.+       .+.|++||.||.....   .   +.....+++|+.++..+.+++..+-  ...++++++|+.........
T Consensus        76 ~a~-------~~~D~Vih~Ag~~~~~---~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~  140 (327)
T 1y7t_A           76 VAF-------KDADYALLVGAAPRKA---G---MERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIA  140 (327)
T ss_dssp             HHT-------TTCSEEEECCCCCCCT---T---CCHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHH
T ss_pred             HHh-------CCCCEEEECCCcCCCC---C---CCHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHH
Confidence            332       2689999999975321   1   2235678999999999998876542  12357888887542111000


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhh
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLE  246 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~  246 (249)
                      +      ......++...|+.||..-+.+.
T Consensus       141 ~------~~~~~~~p~~~yg~tkl~~er~~  164 (327)
T 1y7t_A          141 Y------KNAPGLNPRNFTAMTRLDHNRAK  164 (327)
T ss_dssp             H------HTCTTSCGGGEEECCHHHHHHHH
T ss_pred             H------HHcCCCChhheeccchHHHHHHH
Confidence            0      00002355567999999766654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.90  E-value=7e-09  Score=74.95  Aligned_cols=75  Identities=21%  Similarity=0.232  Sum_probs=61.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+++++|+|+ |++|.++++.|.+.| ++|++++|++++++...    .        ..+..+.+|+++.+.+.+.++  
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--------~~~~~~~~d~~~~~~~~~~~~--   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--------MGVATKQVDAKDEAGLAKALG--   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--------TTCEEEECCTTCHHHHHHHTT--
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--------CCCcEEEecCCCHHHHHHHHc--
Confidence            3578999999 999999999999999 89999999987765543    1        246678899999887766543  


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                           ++|++|++++.
T Consensus        69 -----~~d~vi~~~~~   79 (118)
T 3ic5_A           69 -----GFDAVISAAPF   79 (118)
T ss_dssp             -----TCSEEEECSCG
T ss_pred             -----CCCEEEECCCc
Confidence                 68999999863

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.85  E-value=2.8e-11  Score=108.26  Aligned_cols=134  Identities=16%  Similarity=0.160  Sum_probs=77.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhh--cCCCCCCceEEEEc---cCCCHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW--SGKGLPLNIEAMEL---DLLSLDSVV  136 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~---D~~~~~~v~  136 (249)
                      .+.||+++|||++ +||+++|+.|+..|++|+++++++.++++.........  .......++.+...   |+-+.+   
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e---  337 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLD---  337 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHH---
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHH---
Confidence            5789999999988 99999999999999999999999877655443210000  00000012222111   111111   


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHH-------HHhhhhHHHHHH-HHhchhhhcCCCCeEEEEcCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH-------MQVNHLAPALLS-ILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~-------~~vN~~~~~~l~-~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                       .++.     -+.+.+|+|+|..    ..+.+.+.++..       +..|+.+.+... +..++.|.+   |+|||+||.
T Consensus       338 -~l~~-----mk~gaiVvNaG~~----~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLae---GRIVNlsS~  404 (488)
T 3ond_A          338 -HMKK-----MKNNAIVCNIGHF----DNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAE---GRLMNLGCA  404 (488)
T ss_dssp             -HHTT-----SCTTEEEEESSST----TTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEGG---GSCHHHHHS
T ss_pred             -HHHh-----cCCCeEEEEcCCC----CcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHcC---CcEEEEecC
Confidence             1111     1456777888864    234455555544       233333333222 334444433   899999998


Q ss_pred             cccc
Q 025705          209 MHYV  212 (249)
Q Consensus       209 ~~~~  212 (249)
                      .|.-
T Consensus       405 ~G~p  408 (488)
T 3ond_A          405 TGHP  408 (488)
T ss_dssp             CCSC
T ss_pred             cccC
Confidence            8763

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.82  E-value=2.4e-09  Score=82.36  Aligned_cols=77  Identities=14%  Similarity=0.148  Sum_probs=61.5

Q ss_pred             chHHHHHHHHHHcCCEEEEEEcChHHHH---HHHHHHHHhhcCCCCCCceEEEEccCCCH--HHHHHHHHHHhccCCCcc
Q 025705           76 GIGREIARQLAESGAHVVMAVRNLKAAN---ELIQKWQEEWSGKGLPLNIEAMELDLLSL--DSVVRFSEAWNGRLGPLH  150 (249)
Q Consensus        76 gIG~~ia~~l~~~G~~Vil~~r~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~~v~~~~~~~~~~~g~id  150 (249)
                      -++.++++.|++.|++|++..|+.....   +..+.+.+      .+.++..+.+|++++  ++++++++.+.+.+|+ |
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~------~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-d   99 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ------AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-D   99 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH------TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-C
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH------cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-C
Confidence            4779999999999999999988755432   12333333      124778889999999  9999999999998999 9


Q ss_pred             EEEeccccC
Q 025705          151 VLINNAGIF  159 (249)
Q Consensus       151 ~linnag~~  159 (249)
                      +||||||..
T Consensus       100 VLVnnAgg~  108 (157)
T 3gxh_A          100 VLVHCLANY  108 (157)
T ss_dssp             EEEECSBSH
T ss_pred             EEEECCCCC
Confidence            999999963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.80  E-value=3.9e-08  Score=86.94  Aligned_cols=82  Identities=21%  Similarity=0.306  Sum_probs=69.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC---CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESG---AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G---~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.++|+|| ||||+++++.|++.|   .+|++++|+.+++++..+++....     ..++..+.+|++|.+++++++++.
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-----~~~~~~~~~D~~d~~~l~~~l~~~   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-----YGEIDITTVDADSIEELVALINEV   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-----CCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-----CCceEEEEecCCCHHHHHHHHHhh
Confidence            46899999 899999999999998   489999999999988887776521     125788899999999999998875


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                           ++|++|||+|.
T Consensus        76 -----~~DvVin~ag~   86 (405)
T 4ina_A           76 -----KPQIVLNIALP   86 (405)
T ss_dssp             -----CCSEEEECSCG
T ss_pred             -----CCCEEEECCCc
Confidence                 68999999985

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.79  E-value=1.6e-09  Score=98.85  Aligned_cols=98  Identities=23%  Similarity=0.212  Sum_probs=66.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++|+++||||+ |+|+++++.|++.|++|++++|+.+++++..+++.         .++.    ++.+   +      
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---------~~~~----~~~d---l------  417 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---------GKAL----SLTD---L------  417 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---------C-CE----ETTT---T------
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---------Ccee----eHHH---h------
Confidence            4678999999994 99999999999999999999999988877665541         1121    1212   1      


Q ss_pred             Hhc-cCCCccEEEeccccCCC-----CCCCCCCHHHHHHHHHhhhhHH
Q 025705          142 WNG-RLGPLHVLINNAGIFSI-----GEPQKFSKDGYEEHMQVNHLAP  183 (249)
Q Consensus       142 ~~~-~~g~id~linnag~~~~-----~~~~~~~~~~~~~~~~vN~~~~  183 (249)
                       .+ ..+.+|++|||+|+...     .++.+.+.+.+..++++|+.+.
T Consensus       418 -~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          418 -DNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             -TTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             -hhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence             11 11358999999997532     3455566778888999999875

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.73  E-value=2.9e-08  Score=78.78  Aligned_cols=103  Identities=17%  Similarity=0.129  Sum_probs=71.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|++++||||++|||.++++.+...|++|++++|++++.+..    ++ .   +  ..   ..+|.++.+..+.+.+...
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~-~---g--~~---~~~d~~~~~~~~~~~~~~~  104 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SR-L---G--VE---YVGDSRSVDFADEILELTD  104 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HT-T---C--CS---EEEETTCSTHHHHHHHHTT
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-c---C--CC---EEeeCCcHHHHHHHHHHhC
Confidence            579999999999999999999999999999999997765433    11 1   1  11   1247777655554444332


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                      .  +++|++|+|+|.           +.               .+.+++.|++  .|++|++++..
T Consensus       105 ~--~~~D~vi~~~g~-----------~~---------------~~~~~~~l~~--~G~~v~~g~~~  140 (198)
T 1pqw_A          105 G--YGVDVVLNSLAG-----------EA---------------IQRGVQILAP--GGRFIELGKKD  140 (198)
T ss_dssp             T--CCEEEEEECCCT-----------HH---------------HHHHHHTEEE--EEEEEECSCGG
T ss_pred             C--CCCeEEEECCch-----------HH---------------HHHHHHHhcc--CCEEEEEcCCC
Confidence            1  369999999872           11               2344455544  37999998854

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.72  E-value=2e-08  Score=86.24  Aligned_cols=79  Identities=15%  Similarity=0.230  Sum_probs=60.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++||||++|||.++++.+...|++|+++++++++++.. +++       +  ..   ..+|.++.+++.+.+.+..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-------g--~~---~~~d~~~~~~~~~~~~~~~  211 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-------G--FD---AAFNYKTVNSLEEALKKAS  211 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-------T--CS---EEEETTSCSCHHHHHHHHC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-------C--Cc---EEEecCCHHHHHHHHHHHh
Confidence            579999999999999999999999999999999998776544 222       1  11   2357777445555555554


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      .  +++|++|+|+|
T Consensus       212 ~--~~~d~vi~~~g  223 (333)
T 1v3u_A          212 P--DGYDCYFDNVG  223 (333)
T ss_dssp             T--TCEEEEEESSC
T ss_pred             C--CCCeEEEECCC
Confidence            3  57999999998

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.71  E-value=4.9e-08  Score=84.34  Aligned_cols=104  Identities=12%  Similarity=-0.001  Sum_probs=74.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+|+++|||.++++.+...|++|++++|++++++.. +++       +  ..   ..+|+++.+++.+.+.++.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~-------g--~~---~~~d~~~~~~~~~~~~~~~  235 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI-------G--GE---VFIDFTKEKDIVGAVLKAT  235 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT-------T--CC---EEEETTTCSCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc-------C--Cc---eEEecCccHhHHHHHHHHh
Confidence            579999999999999999999999999999999998776432 221       1  11   2248776556666666655


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                      +.  ++|++|+|+|..          +               ..+.+++.|.+  .|+||++++..
T Consensus       236 ~~--~~D~vi~~~g~~----------~---------------~~~~~~~~l~~--~G~iv~~g~~~  272 (347)
T 2hcy_A          236 DG--GAHGVINVSVSE----------A---------------AIEASTRYVRA--NGTTVLVGMPA  272 (347)
T ss_dssp             TS--CEEEEEECSSCH----------H---------------HHHHHTTSEEE--EEEEEECCCCT
T ss_pred             CC--CCCEEEECCCcH----------H---------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence            43  799999999841          0               34555666654  37999998754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.70  E-value=3e-08  Score=86.57  Aligned_cols=109  Identities=16%  Similarity=0.150  Sum_probs=74.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+.+++++|+|+ |+||+.+++.+...|++|++++|++++++...+.+    .     ..   +.+|.++.+++.+.+.
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g-----~~---~~~~~~~~~~l~~~~~  228 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----G-----GR---VITLTATEANIKKSVQ  228 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----T-----TS---EEEEECCHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----C-----ce---EEEecCCHHHHHHHHh
Confidence            3578899999999 99999999999999999999999987765543221    1     12   3467777777766553


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMH  210 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~  210 (249)
                             +.|++|+++|......                   +..+.+..++.|++  .|.||++++..+
T Consensus       229 -------~~DvVi~~~g~~~~~~-------------------~~li~~~~l~~mk~--gg~iV~v~~~~g  270 (369)
T 2eez_A          229 -------HADLLIGAVLVPGAKA-------------------PKLVTRDMLSLMKE--GAVIVDVAVDQG  270 (369)
T ss_dssp             -------HCSEEEECCC--------------------------CCSCHHHHTTSCT--TCEEEECC----
T ss_pred             -------CCCEEEECCCCCcccc-------------------chhHHHHHHHhhcC--CCEEEEEecCCC
Confidence                   5899999998642100                   12234556677753  479999998754

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.68  E-value=1.4e-08  Score=85.73  Aligned_cols=81  Identities=23%  Similarity=0.381  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++|||++ |+|+++|+.|++.| +|++++|+.+++++..+++......     .. .+.+|+++.         
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~-----~~-~~~~d~~~~---------  187 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK-----KF-GEEVKFSGL---------  187 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC-----CH-HHHEEEECT---------
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc-----cc-ceeEEEeeH---------
Confidence            4678999999997 99999999999999 9999999998888887776542100     00 112344441         


Q ss_pred             HhccCCCccEEEeccccCC
Q 025705          142 WNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~  160 (249)
                       .+.++++|++|||+|...
T Consensus       188 -~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          188 -DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             -TCCCTTCCEEEECSCTTC
T ss_pred             -HHhhCCCCEEEECCCCCC
Confidence             345678999999999754

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.64  E-value=5.5e-08  Score=87.08  Aligned_cols=78  Identities=18%  Similarity=0.184  Sum_probs=61.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +++.++|+| +|++|+++++.|++.|++|++++|+.+++++..+++          ..+..+.+|++|.+++.++++   
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----------~~~~~~~~Dv~d~~~l~~~l~---   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----------QHSTPISLDVNDDAALDAEVA---   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----------TTEEEEECCTTCHHHHHHHHT---
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----------CCceEEEeecCCHHHHHHHHc---
Confidence            468899998 799999999999999999999999987654442211          136678899999988776653   


Q ss_pred             ccCCCccEEEeccccC
Q 025705          144 GRLGPLHVLINNAGIF  159 (249)
Q Consensus       144 ~~~g~id~linnag~~  159 (249)
                          ++|++|||++..
T Consensus        68 ----~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 ----KHDLVISLIPYT   79 (450)
T ss_dssp             ----TSSEEEECCC--
T ss_pred             ----CCcEEEECCccc
Confidence                699999999864

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.58  E-value=6.8e-07  Score=76.17  Aligned_cols=84  Identities=15%  Similarity=0.200  Sum_probs=64.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC---hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN---LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .+++++.++++....       .+.+...++.+.+++.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-------~~~~~~~~~~~~~~l~  221 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-------DCKAQLFDIEDHEQLR  221 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-------SCEEEEEETTCHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-------CCceEEeccchHHHHH
Confidence            4578999999998 6999999999999999 89999999   888888888877642       1223344666665554


Q ss_pred             HHHHHHhccCCCccEEEeccccC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~  159 (249)
                      +.+.       ..|++||+....
T Consensus       222 ~~l~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          222 KEIA-------ESVIFTNATGVG  237 (315)
T ss_dssp             HHHH-------TCSEEEECSSTT
T ss_pred             hhhc-------CCCEEEECccCC
Confidence            4333       589999998653

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.55  E-value=2.6e-07  Score=77.21  Aligned_cols=77  Identities=21%  Similarity=0.302  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++...       ..+  ...|+   +++      
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~-------~~~--~~~~~---~~~------  176 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-------GSI--QALSM---DEL------  176 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-------SSE--EECCS---GGG------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc-------CCe--eEecH---HHh------
Confidence            467899999998 69999999999999999999999998887776654321       012  12333   211      


Q ss_pred             HhccCCCccEEEeccccCC
Q 025705          142 WNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~  160 (249)
                       .+  ++.|++|||+|...
T Consensus       177 -~~--~~~DivVn~t~~~~  192 (271)
T 1nyt_A          177 -EG--HEFDLIINATSSGI  192 (271)
T ss_dssp             -TT--CCCSEEEECCSCGG
T ss_pred             -cc--CCCCEEEECCCCCC
Confidence             11  58999999999754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.50  E-value=3.9e-07  Score=81.84  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++++.++|+|+ ||+|++++..|++. |++|++++|+.+++++..++  .         .+..+.+|+.|.+++.++++
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~--~---------~~~~~~~D~~d~~~l~~~l~   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP--S---------GSKAISLDVTDDSALDKVLA   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG--G---------TCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh--c---------CCcEEEEecCCHHHHHHHHc
Confidence            456789999997 99999999999998 78999999998877655432  1         24566789999888776654


Q ss_pred             HHhccCCCccEEEeccccC
Q 025705          141 AWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~  159 (249)
                             ++|++||+++..
T Consensus        88 -------~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -------DNDVVISLIPYT   99 (467)
T ss_dssp             -------TSSEEEECSCGG
T ss_pred             -------CCCEEEECCchh
Confidence                   589999999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.48  E-value=2.6e-07  Score=79.06  Aligned_cols=79  Identities=18%  Similarity=0.229  Sum_probs=58.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+||++|||.++++.+...|++|+++++++++++...+ +    .     ..   ..+|.++.+..+++.+...
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~----g-----~~---~~~~~~~~~~~~~~~~~~~  206 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A----G-----AW---QVINYREEDLVERLKEITG  206 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H----T-----CS---EEEETTTSCHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----C-----CC---EEEECCCccHHHHHHHHhC
Confidence            57999999999999999999999999999999999877654432 1    1     11   1247766655555544332


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      .  .++|++|+|+|
T Consensus       207 ~--~~~D~vi~~~g  218 (327)
T 1qor_A          207 G--KKVRVVYDSVG  218 (327)
T ss_dssp             T--CCEEEEEECSC
T ss_pred             C--CCceEEEECCc
Confidence            2  36999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.48  E-value=3.5e-07  Score=78.47  Aligned_cols=80  Identities=16%  Similarity=0.182  Sum_probs=58.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+||+||||.++++.+...|++|+++++++++++... ++    .     ..   ..+|.++.+..+++.+...
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~----g-----~~---~~~d~~~~~~~~~i~~~~~  211 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL----G-----CH---HTINYSTQDFAEVVREITG  211 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH----T-----CS---EEEETTTSCHHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----C-----CC---EEEECCCHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999987765442 22    1     11   1247766655555444432


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  .++|++|+|+|.
T Consensus       212 ~--~~~d~vi~~~g~  224 (333)
T 1wly_A          212 G--KGVDVVYDSIGK  224 (333)
T ss_dssp             T--CCEEEEEECSCT
T ss_pred             C--CCCeEEEECCcH
Confidence            2  369999999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.47  E-value=8.6e-07  Score=66.26  Aligned_cols=75  Identities=17%  Similarity=0.218  Sum_probs=58.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ..++++|+|+ |.+|.++++.|.++|++|++++++++..+...    +        ..+.++.+|.++++.++++     
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~--------~~~~~~~gd~~~~~~l~~~-----   66 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----D--------EGFDAVIADPTDESFYRSL-----   66 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H--------TTCEEEECCTTCHHHHHHS-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----H--------CCCcEEECCCCCHHHHHhC-----
Confidence            3467999998 77999999999999999999999987665443    2        1356778999999877653     


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                       ...+.|++|.+.+
T Consensus        67 -~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 -DLEGVSAVLITGS   79 (141)
T ss_dssp             -CCTTCSEEEECCS
T ss_pred             -CcccCCEEEEecC
Confidence             2246899998766

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.44  E-value=1.9e-07  Score=80.41  Aligned_cols=81  Identities=14%  Similarity=0.187  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+||+||||..+++.+...|++|+++++++++++...+++       +  ..   ..+|.++.+++.+.+.++.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-------g--~~---~~~d~~~~~~~~~~~~~~~  222 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-------G--FD---DAFNYKEESDLTAALKRCF  222 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-------C--CS---EEEETTSCSCSHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------C--Cc---eEEecCCHHHHHHHHHHHh
Confidence            5799999999999999999999999999999999987765442221       1  11   1236665544445555543


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  +++|++|+|+|.
T Consensus       223 ~--~~~d~vi~~~g~  235 (345)
T 2j3h_A          223 P--NGIDIYFENVGG  235 (345)
T ss_dssp             T--TCEEEEEESSCH
T ss_pred             C--CCCcEEEECCCH
Confidence            2  479999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.43  E-value=2.6e-07  Score=68.83  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=56.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++++++|+|+ |++|..+++.|.+.|++|+++++++++.+..    .+        .....+.+|.++.+.+.++    
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~--------~~~~~~~~d~~~~~~l~~~----   66 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----AS--------YATHAVIANATEENELLSL----   66 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TT--------TCSEEEECCTTCHHHHHTT----
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH--------hCCEEEEeCCCCHHHHHhc----
Confidence            45678999998 9999999999999999999999987654322    11        1234567899887655432    


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                        ...+.|++|++++.
T Consensus        67 --~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 --GIRNFEYVIVAIGA   80 (144)
T ss_dssp             --TGGGCSEEEECCCS
T ss_pred             --CCCCCCEEEECCCC
Confidence              12468999999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.43  E-value=4.9e-07  Score=78.28  Aligned_cols=80  Identities=13%  Similarity=0.114  Sum_probs=58.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+||+||||..+++.+...|++|+++++++++++.. +++.         ..   ..+|.++.+..+++.+...
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g---------~~---~~~~~~~~~~~~~~~~~~~  228 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG---------AA---AGFNYKKEDFSEATLKFTK  228 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT---------CS---EEEETTTSCHHHHHHHHTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC---------Cc---EEEecCChHHHHHHHHHhc
Confidence            579999999999999999999999999999999998776554 2221         11   2346666554444433321


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  +++|++|+|+|.
T Consensus       229 ~--~~~d~vi~~~G~  241 (354)
T 2j8z_A          229 G--AGVNLILDCIGG  241 (354)
T ss_dssp             T--SCEEEEEESSCG
T ss_pred             C--CCceEEEECCCc
Confidence            1  369999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.41  E-value=6.3e-07  Score=77.55  Aligned_cols=80  Identities=9%  Similarity=0.148  Sum_probs=57.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+||+||||..+++.+...|++|+++++++++++.. +++       +  ..   ..+|.++.+..+++.+...
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-------g--a~---~~~d~~~~~~~~~~~~~~~  236 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-------G--AH---EVFNHREVNYIDKIKKYVG  236 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-------T--CS---EEEETTSTTHHHHHHHHHC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-------C--CC---EEEeCCCchHHHHHHHHcC
Confidence            578999999999999999999999999999999998776532 221       1  11   1246766554544443332


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                        ..++|++|+|+|.
T Consensus       237 --~~~~D~vi~~~G~  249 (351)
T 1yb5_A          237 --EKGIDIIIEMLAN  249 (351)
T ss_dssp             --TTCEEEEEESCHH
T ss_pred             --CCCcEEEEECCCh
Confidence              1369999999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.39  E-value=3.7e-07  Score=79.05  Aligned_cols=77  Identities=14%  Similarity=0.129  Sum_probs=55.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ++++|+||+||||..+++.+...|+ +|+++++++++++...+++    .     ..   ..+|.++.+..+. +.+...
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~----g-----~~---~~~d~~~~~~~~~-~~~~~~  228 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL----G-----FD---AAINYKKDNVAEQ-LRESCP  228 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS----C-----CS---EEEETTTSCHHHH-HHHHCT
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----C-----Cc---eEEecCchHHHHH-HHHhcC
Confidence            8999999999999999999999999 9999999987665443221    1     11   2347666443333 333322


Q ss_pred             cCCCccEEEeccc
Q 025705          145 RLGPLHVLINNAG  157 (249)
Q Consensus       145 ~~g~id~linnag  157 (249)
                        +++|++|+|+|
T Consensus       229 --~~~d~vi~~~G  239 (357)
T 2zb4_A          229 --AGVDVYFDNVG  239 (357)
T ss_dssp             --TCEEEEEESCC
T ss_pred             --CCCCEEEECCC
Confidence              26999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.38  E-value=5.2e-07  Score=77.42  Aligned_cols=80  Identities=18%  Similarity=0.253  Sum_probs=57.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+||+||||..+++.+...|++|+++++++++++...+++       +  ..   ...|.++.+..+.+.+ ..
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-------g--~~---~~~~~~~~~~~~~~~~-~~  215 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-------G--FD---GAIDYKNEDLAAGLKR-EC  215 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-------C--CS---EEEETTTSCHHHHHHH-HC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------C--CC---EEEECCCHHHHHHHHH-hc
Confidence            5799999999999999999999999999999999987765442221       1  11   1246666544444333 22


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                        .+++|++|+|+|.
T Consensus       216 --~~~~d~vi~~~g~  228 (336)
T 4b7c_A          216 --PKGIDVFFDNVGG  228 (336)
T ss_dssp             --TTCEEEEEESSCH
T ss_pred             --CCCceEEEECCCc
Confidence              2479999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.37  E-value=2e-06  Score=73.73  Aligned_cols=81  Identities=12%  Similarity=0.162  Sum_probs=56.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|++++|+||+||||...+..+...|++|+++++++++++.. +++    .     .. .  ..|..+.+..+.+.+..
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----g-----a~-~--~~~~~~~~~~~~~~~~~  213 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY----G-----AE-Y--LINASKEDILRQVLKFT  213 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----T-----CS-E--EEETTTSCHHHHHHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----C-----Cc-E--EEeCCCchHHHHHHHHh
Confidence            3579999999999999999999999999999999998776533 221    1     11 1  23555544444433322


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  .++|++|+|+|.
T Consensus       214 ~~--~g~D~vid~~g~  227 (334)
T 3qwb_A          214 NG--KGVDASFDSVGK  227 (334)
T ss_dssp             TT--SCEEEEEECCGG
T ss_pred             CC--CCceEEEECCCh
Confidence            11  269999999984

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.36  E-value=1.2e-06  Score=74.91  Aligned_cols=80  Identities=18%  Similarity=0.171  Sum_probs=57.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+||+|++|...++.+...|++|+++++++++++... ++.         .. .  ..|.++.+..+++.+...
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~G---------a~-~--~~~~~~~~~~~~~~~~~~  206 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALG---------AW-E--TIDYSHEDVAKRVLELTD  206 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHT---------CS-E--EEETTTSCHHHHHHHHTT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---------CC-E--EEeCCCccHHHHHHHHhC
Confidence            5799999999999999999999999999999999988765442 221         11 1  235555544444433321


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  .++|++|+|+|.
T Consensus       207 ~--~g~Dvvid~~g~  219 (325)
T 3jyn_A          207 G--KKCPVVYDGVGQ  219 (325)
T ss_dssp             T--CCEEEEEESSCG
T ss_pred             C--CCceEEEECCCh
Confidence            1  269999999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.30  E-value=3e-06  Score=73.60  Aligned_cols=101  Identities=18%  Similarity=0.135  Sum_probs=68.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh---HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL---KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .++|++|+|+|+ ||+|..+++.+...|++|++++++.   ++.+.. +++.           ...+  | .+ +..+++
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~g-----------a~~v--~-~~-~~~~~~  240 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EETK-----------TNYY--N-SS-NGYDKL  240 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHHT-----------CEEE--E-CT-TCSHHH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHhC-----------Ccee--c-hH-HHHHHH
Confidence            456999999999 9999999999999999999999987   665332 2221           1222  5 44 222232


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHH-HHhchhhhcCCCCeEEEEcCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS-ILLFPSLIRGSPSRIINVNSVMH  210 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~-~~~l~~m~~~~~g~Iv~vsS~~~  210 (249)
                      .+ . .  +++|++|+++|...                         .. +.+++.|.+  .|+||+++...+
T Consensus       241 ~~-~-~--~~~d~vid~~g~~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~~  282 (366)
T 2cdc_A          241 KD-S-V--GKFDVIIDATGADV-------------------------NILGNVIPLLGR--NGVLGLFGFSTS  282 (366)
T ss_dssp             HH-H-H--CCEEEEEECCCCCT-------------------------HHHHHHGGGEEE--EEEEEECSCCCS
T ss_pred             HH-h-C--CCCCEEEECCCChH-------------------------HHHHHHHHHHhc--CCEEEEEecCCC
Confidence            22 2 2  57999999998521                         22 555666654  379999887543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.29  E-value=1.7e-06  Score=74.61  Aligned_cols=80  Identities=13%  Similarity=0.153  Sum_probs=56.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++++|+|+++|||..+++.+... |++|+++++++++++.. +++    .     ..   ..+|.++.+..+++ .++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~----g-----~~---~~~~~~~~~~~~~~-~~~  235 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA----G-----AD---YVINASMQDPLAEI-RRI  235 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH----T-----CS---EEEETTTSCHHHHH-HHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh----C-----CC---EEecCCCccHHHHH-HHH
Confidence            5789999999999999999999999 99999999998776544 222    1     11   12366654443333 333


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ... +++|++|+|+|.
T Consensus       236 ~~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          236 TES-KGVDAVIDLNNS  250 (347)
T ss_dssp             TTT-SCEEEEEESCCC
T ss_pred             hcC-CCceEEEECCCC
Confidence            221 479999999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.29  E-value=5.3e-06  Score=69.67  Aligned_cols=81  Identities=14%  Similarity=0.169  Sum_probs=60.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.+++++..+++......    .++  ...+..+   +.+.+.
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~----~~i--~~~~~~~---l~~~l~  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGR----EAV--VGVDARG---IEDVIA  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTS----CCE--EEECSTT---HHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCC----ceE--EEcCHHH---HHHHHh
Confidence            578899999998 7999999999999999 7999999999999998888764322    122  2334333   333222


Q ss_pred             HHhccCCCccEEEeccccC
Q 025705          141 AWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~  159 (249)
                             ..|++||+....
T Consensus       194 -------~~DiVInaTp~G  205 (283)
T 3jyo_A          194 -------AADGVVNATPMG  205 (283)
T ss_dssp             -------HSSEEEECSSTT
T ss_pred             -------cCCEEEECCCCC
Confidence                   479999998653

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.29  E-value=2.2e-06  Score=71.62  Aligned_cols=77  Identities=21%  Similarity=0.315  Sum_probs=56.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++++++++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++...       ..+..  .|+   +++      
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~-------~~~~~--~~~---~~~------  176 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-------GNIQA--VSM---DSI------  176 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-------SCEEE--EEG---GGC------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc-------CCeEE--eeH---HHh------
Confidence            467899999998 79999999999999999999999999888877665431       12222  232   111      


Q ss_pred             HhccCCCccEEEeccccCC
Q 025705          142 WNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~  160 (249)
                       .+  +..|++||+++...
T Consensus       177 -~~--~~~DivIn~t~~~~  192 (272)
T 1p77_A          177 -PL--QTYDLVINATSAGL  192 (272)
T ss_dssp             -CC--SCCSEEEECCCC--
T ss_pred             -cc--CCCCEEEECCCCCC
Confidence             01  47999999999754

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.28  E-value=8.2e-06  Score=69.37  Aligned_cols=84  Identities=17%  Similarity=0.190  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC---hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN---LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+   .+++++.++++.....     ..+.  ..+..+.+...
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-----~~v~--~~~~~~l~~~~  215 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-----CVVT--VTDLADQHAFT  215 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-----CEEE--EEETTCHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-----cceE--EechHhhhhhH
Confidence            4578899999998 8999999999999999 89999999   8888888888776421     1233  34555543322


Q ss_pred             HHHHHHhccCCCccEEEeccccC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~  159 (249)
                      +.+.       +.|++||+....
T Consensus       216 ~~l~-------~~DiIINaTp~G  231 (312)
T 3t4e_A          216 EALA-------SADILTNGTKVG  231 (312)
T ss_dssp             HHHH-------HCSEEEECSSTT
T ss_pred             hhcc-------CceEEEECCcCC
Confidence            2222       479999997654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.28  E-value=1.5e-06  Score=77.46  Aligned_cols=86  Identities=10%  Similarity=0.214  Sum_probs=57.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEE--ccCC---------C
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME--LDLL---------S  131 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~D~~---------~  131 (249)
                      ..|++|+|+||+||||...+..+...|++|+++++++++++.. +++    .     ....+..  .|+.         +
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l----G-----a~~~i~~~~~~~~~~~~~~~~~~  288 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL----G-----CDLVINRAELGITDDIADDPRRV  288 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----T-----CCCEEEHHHHTCCTTGGGCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc----C-----CCEEEeccccccccccccccccc
Confidence            4689999999999999999999999999999999988776544 221    1     1112211  1221         1


Q ss_pred             HHHHHHHHHHHhccCC-CccEEEecccc
Q 025705          132 LDSVVRFSEAWNGRLG-PLHVLINNAGI  158 (249)
Q Consensus       132 ~~~v~~~~~~~~~~~g-~id~linnag~  158 (249)
                      .++++++.+++.+..+ ++|++|+|+|.
T Consensus       289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          289 VETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             chhhhHHHHHHHHHhCCCceEEEECCCc
Confidence            2334444555554333 69999999983

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.21  E-value=4.3e-06  Score=72.27  Aligned_cols=79  Identities=15%  Similarity=0.182  Sum_probs=57.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+||+||||..+++.+...|++|+++++++++++... ++.         .. .  ..|..+.+..+.+.+.. 
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lG---------a~-~--~~~~~~~~~~~~~~~~~-  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLG---------AK-R--GINYRSEDFAAVIKAET-  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHT---------CS-E--EEETTTSCHHHHHHHHH-
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC---------CC-E--EEeCCchHHHHHHHHHh-
Confidence            5789999999999999999999999999999999988765443 221         11 1  23555554444443333 


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                        .+++|++|+|+|.
T Consensus       233 --~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 --GQGVDIILDMIGA  245 (353)
T ss_dssp             --SSCEEEEEESCCG
T ss_pred             --CCCceEEEECCCH
Confidence              3479999999984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.20  E-value=5.7e-06  Score=71.14  Aligned_cols=79  Identities=13%  Similarity=0.109  Sum_probs=56.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++++|+|+++|+|..+++.+...|++|+++++++++++... ++    .     .. .  .+|.++.+..++ +.+..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~----g-----a~-~--~~d~~~~~~~~~-~~~~~  231 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL----G-----AD-E--TVNYTHPDWPKE-VRRLT  231 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH----T-----CS-E--EEETTSTTHHHH-HHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc----C-----CC-E--EEcCCcccHHHH-HHHHh
Confidence            5789999999999999999999999999999999987765542 21    1     11 1  247666543333 33332


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      . ..++|++|+|+|
T Consensus       232 ~-~~~~d~vi~~~g  244 (343)
T 2eih_A          232 G-GKGADKVVDHTG  244 (343)
T ss_dssp             T-TTCEEEEEESSC
T ss_pred             C-CCCceEEEECCC
Confidence            2 136999999998

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.16  E-value=4e-06  Score=71.95  Aligned_cols=120  Identities=8%  Similarity=0.039  Sum_probs=79.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcC----hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-------HVVMAVRN----LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS  134 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  134 (249)
                      ..++||||+|.+|.+++..|+.+|.       .|+++|++    .++++....++.+..      ..+.   .|+...++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~------~~~~---~~i~~~~~   76 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA------FPLL---AGMTAHAD   76 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT------CTTE---EEEEEESS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc------cccc---CcEEEecC
Confidence            4799999999999999999999885       79999998    655665555555411      0111   23333333


Q ss_pred             HHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          135 VVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       135 v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                      ..+.       +.+.|++|+.||....   ...+.   ...+..|+.....+++.+..+.  ...+.||++|.-.
T Consensus        77 ~~~a-------l~~aD~Vi~~ag~~~~---~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv  136 (329)
T 1b8p_A           77 PMTA-------FKDADVALLVGARPRG---PGMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPA  136 (329)
T ss_dssp             HHHH-------TTTCSEEEECCCCCCC---TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSH
T ss_pred             cHHH-------hCCCCEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCch
Confidence            3332       2368999999997532   11222   3467888888777777765542  1246899998744

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.15  E-value=1.2e-05  Score=69.35  Aligned_cols=79  Identities=14%  Similarity=0.119  Sum_probs=55.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++++|+||+|+||...+..+...|++|+++++++++++... ++.         .. .  ..|..+.+..+.+.+....
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~G---------a~-~--~~~~~~~~~~~~v~~~~~~  231 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIG---------AA-H--VLNEKAPDFEATLREVMKA  231 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHT---------CS-E--EEETTSTTHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---------CC-E--EEECCcHHHHHHHHHHhcC
Confidence            379999999999999999999999999999999988765442 221         11 1  2355554433333333222


Q ss_pred             cCCCccEEEecccc
Q 025705          145 RLGPLHVLINNAGI  158 (249)
Q Consensus       145 ~~g~id~linnag~  158 (249)
                        .++|++|+|+|.
T Consensus       232 --~g~D~vid~~g~  243 (349)
T 3pi7_A          232 --EQPRIFLDAVTG  243 (349)
T ss_dssp             --HCCCEEEESSCH
T ss_pred             --CCCcEEEECCCC
Confidence              269999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.10  E-value=5.3e-06  Score=71.28  Aligned_cols=81  Identities=17%  Similarity=0.076  Sum_probs=57.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|++|+|+||+++||...+..+...|++|+++++++++++...+ +.         .. .  ..|..+.+..+++.+..
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lg---------a~-~--~~~~~~~~~~~~~~~~~  209 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LG---------AA-Y--VIDTSTAPLYETVMELT  209 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT---------CS-E--EEETTTSCHHHHHHHHT
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CC---------Cc-E--EEeCCcccHHHHHHHHh
Confidence            357899999999999999999999999999999999887654432 21         11 1  23555544443333322


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                       . ..++|++|+|+|.
T Consensus       210 -~-~~g~Dvvid~~g~  223 (340)
T 3gms_A          210 -N-GIGADAAIDSIGG  223 (340)
T ss_dssp             -T-TSCEEEEEESSCH
T ss_pred             -C-CCCCcEEEECCCC
Confidence             1 1269999999985

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.09  E-value=1.5e-05  Score=68.46  Aligned_cols=77  Identities=16%  Similarity=0.111  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+|+ +|+|..+++.+...|++|+.+++++++++... ++       +  ..   ..+|.++.+..++ +.+..
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-------G--a~---~~~d~~~~~~~~~-~~~~~  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-------G--AD---LVVNPLKEDAAKF-MKEKV  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-------T--CS---EEECTTTSCHHHH-HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-------C--CC---EEecCCCccHHHH-HHHHh
Confidence            4789999999 88999999999999999999999987765432 11       1  11   1247665433333 33322


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                         +++|++|+++|.
T Consensus       229 ---~~~d~vid~~g~  240 (339)
T 1rjw_A          229 ---GGVHAAVVTAVS  240 (339)
T ss_dssp             ---SSEEEEEESSCC
T ss_pred             ---CCCCEEEECCCC
Confidence               579999999984

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.07  E-value=2.3e-05  Score=59.27  Aligned_cols=78  Identities=15%  Similarity=0.117  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+++++|.|+ |.+|..+++.|.+.|++|+++++++ ++.+...+.. .        ..+.++.+|.++++.+++.    
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~--------~~~~~i~gd~~~~~~l~~a----   67 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-G--------DNADVIPGDSNDSSVLKKA----   67 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-C--------TTCEEEESCTTSHHHHHHH----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-c--------CCCeEEEcCCCCHHHHHHc----
Confidence            3467889986 9999999999999999999999974 4443333221 1        1467888999998876543    


Q ss_pred             hccCCCccEEEeccc
Q 025705          143 NGRLGPLHVLINNAG  157 (249)
Q Consensus       143 ~~~~g~id~linnag  157 (249)
                        ...+.|.+|.+.+
T Consensus        68 --~i~~ad~vi~~~~   80 (153)
T 1id1_A           68 --GIDRCRAILALSD   80 (153)
T ss_dssp             --TTTTCSEEEECSS
T ss_pred             --ChhhCCEEEEecC
Confidence              1236788888765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.03  E-value=6.5e-05  Score=55.32  Aligned_cols=75  Identities=16%  Similarity=0.282  Sum_probs=54.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +..++|+|+ |.+|..+++.|.+.|++|++++++++..+...    +.       ..+..+..|.++.+.+.+.      
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~----~~-------~~~~~~~~d~~~~~~l~~~------   65 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS----AE-------IDALVINGDCTKIKTLEDA------   65 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HH-------CSSEEEESCTTSHHHHHHT------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH----Hh-------cCcEEEEcCCCCHHHHHHc------
Confidence            357899987 99999999999999999999999977654432    21       1245667898887654321      


Q ss_pred             cCCCccEEEeccc
Q 025705          145 RLGPLHVLINNAG  157 (249)
Q Consensus       145 ~~g~id~linnag  157 (249)
                      ...+.|++|.+.+
T Consensus        66 ~~~~~d~vi~~~~   78 (140)
T 1lss_A           66 GIEDADMYIAVTG   78 (140)
T ss_dssp             TTTTCSEEEECCS
T ss_pred             CcccCCEEEEeeC
Confidence            1246899999865

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.01  E-value=2.7e-05  Score=66.96  Aligned_cols=79  Identities=18%  Similarity=0.226  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+||+|+||...+..+...|++|++++++.++++... ++.         .. .++  |..  +++.+.+.+..
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g---------a~-~v~--~~~--~~~~~~v~~~~  223 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVG---------AD-IVL--PLE--EGWAKAVREAT  223 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHT---------CS-EEE--ESS--TTHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC---------Cc-EEe--cCc--hhHHHHHHHHh
Confidence            5799999999999999999999999999999999988765432 221         11 222  443  23333333332


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .. .++|++|+|+|.
T Consensus       224 ~~-~g~Dvvid~~g~  237 (342)
T 4eye_A          224 GG-AGVDMVVDPIGG  237 (342)
T ss_dssp             TT-SCEEEEEESCC-
T ss_pred             CC-CCceEEEECCch
Confidence            21 259999999984

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.98  E-value=3.6e-05  Score=66.80  Aligned_cols=78  Identities=17%  Similarity=0.136  Sum_probs=56.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+++++|+|+|+ ||+|+++++.+...|++|++++|++++++...+....         .+..   +..+.+++.+.+  
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---------~~~~---~~~~~~~~~~~~--  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---------RVEL---LYSNSAEIETAV--  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---------GSEE---EECCHHHHHHHH--
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---------eeEe---eeCCHHHHHHHH--
Confidence            467799999999 9999999999999999999999999887666433221         2212   222344443322  


Q ss_pred             HhccCCCccEEEeccccC
Q 025705          142 WNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       142 ~~~~~g~id~linnag~~  159 (249)
                           .+.|++||+++..
T Consensus       229 -----~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 -----AEADLLIGAVLVP  241 (361)
T ss_dssp             -----HTCSEEEECCCCT
T ss_pred             -----cCCCEEEECCCcC
Confidence                 2689999999874

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.96  E-value=7.4e-05  Score=62.55  Aligned_cols=76  Identities=16%  Similarity=0.245  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++++++|+|+ ||+|++++..|++.|+ +|.+++|+.+++++..+++...       ..+.....  .+   +    
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~-------~~~~~~~~--~~---l----  184 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY-------GEVKAQAF--EQ---L----  184 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG-------SCEEEEEG--GG---C----
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc-------CCeeEeeH--HH---h----
Confidence            3578899999998 6999999999999997 9999999999988888776542       12333322  11   1    


Q ss_pred             HHHhccCCCccEEEeccccC
Q 025705          140 EAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~  159 (249)
                            ....|++||+....
T Consensus       185 ------~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 ------KQSYDVIINSTSAS  198 (281)
T ss_dssp             ------CSCEEEEEECSCCC
T ss_pred             ------cCCCCEEEEcCcCC
Confidence                  03689999998654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.95  E-value=1.5e-05  Score=69.26  Aligned_cols=75  Identities=13%  Similarity=0.176  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++.+...+++         +.. .  ..|..+.+.+++      
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---------Ga~-~--v~~~~~~~~~~~------  247 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---------GAD-S--FLVSRDQEQMQA------  247 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---------CCS-E--EEETTCHHHHHH------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---------CCc-e--EEeccCHHHHHH------
Confidence            6789999996 99999999999999999999999987765443221         111 1  236666543322      


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                       ..+++|++|+++|.
T Consensus       248 -~~~~~D~vid~~g~  261 (366)
T 1yqd_A          248 -AAGTLDGIIDTVSA  261 (366)
T ss_dssp             -TTTCEEEEEECCSS
T ss_pred             -hhCCCCEEEECCCc
Confidence             22479999999985

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.93  E-value=4.4e-05  Score=63.65  Aligned_cols=49  Identities=20%  Similarity=0.363  Sum_probs=43.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQ  110 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~  110 (249)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.+++++.++++.
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            3578999999998 6999999999999996 99999999998888776653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.93  E-value=0.00016  Score=61.81  Aligned_cols=105  Identities=11%  Similarity=0.093  Sum_probs=66.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ..++||||+|.+|..++..|+++|  .+|++++++++  +....++.+..    ...++..    +.+.++..+.+    
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~----~~~~v~~----~~~t~d~~~al----   74 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD----TGAVVRG----FLGQQQLEAAL----   74 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC----SSCEEEE----EESHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc----ccceEEE----EeCCCCHHHHc----
Confidence            469999999999999999999998  78999998876  33333333310    0012222    22333443332    


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchh
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPS  193 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~  193 (249)
                         .+.|++|++||.....   ..+.+   ..+..|+.....+.+.+..+
T Consensus        75 ---~gaDvVi~~ag~~~~~---g~~r~---dl~~~N~~~~~~i~~~i~~~  115 (326)
T 1smk_A           75 ---TGMDLIIVPAGVPRKP---GMTRD---DLFKINAGIVKTLCEGIAKC  115 (326)
T ss_dssp             ---TTCSEEEECCCCCCCS---SCCCS---HHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCEEEEcCCcCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh
Confidence               2689999999975321   11222   34778888777777776554

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.93  E-value=1.5e-05  Score=67.44  Aligned_cols=78  Identities=24%  Similarity=0.361  Sum_probs=55.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++++++|+|+ ||+|++++..|++.|+ +|++++|+.+++++..+++..    .   ..      ++.+.+++     
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~----~---~~------~~~~~~~~-----  198 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE----R---RS------AYFSLAEA-----  198 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS----S---SC------CEECHHHH-----
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh----c---cC------ceeeHHHH-----
Confidence            467899999998 7999999999999998 999999999887776654321    0   00      11122222     


Q ss_pred             HHhccCCCccEEEeccccCC
Q 025705          141 AWNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~  160 (249)
                        .+.....|++||+.+...
T Consensus       199 --~~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          199 --ETRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             --HHTGGGCSEEEECSCTTC
T ss_pred             --HhhhccCCEEEECCCCCC
Confidence              222346899999998653

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.88  E-value=4.5e-05  Score=68.14  Aligned_cols=86  Identities=13%  Similarity=0.160  Sum_probs=60.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEE--cc--------CCCH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME--LD--------LLSL  132 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~D--------~~~~  132 (249)
                      ..|++|+|+||+|++|...+..+...|++|+++++++++++.. +++..         ...+..  .|        ..+.
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa---------~~vi~~~~~d~~~~~~~~~~~~  296 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGA---------EAIIDRNAEGYRFWKDENTQDP  296 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTC---------CEEEETTTTTCCSEEETTEECH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCC---------cEEEecCcCcccccccccccch
Confidence            4679999999999999999999999999999999988776544 22211         111111  11        2455


Q ss_pred             HHHHHHHHHHhccCC--CccEEEecccc
Q 025705          133 DSVVRFSEAWNGRLG--PLHVLINNAGI  158 (249)
Q Consensus       133 ~~v~~~~~~~~~~~g--~id~linnag~  158 (249)
                      ++++++.+++.+..+  ++|++|+++|.
T Consensus       297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          297 KEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            666666666665432  69999999884

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.87  E-value=4.5e-05  Score=66.61  Aligned_cols=108  Identities=17%  Similarity=0.149  Sum_probs=72.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+.+++++|+|+ |+||..+++.+...|++|++++|++++++...+.+.         ..+   ..|..+.+++.+.+.
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g---------~~~---~~~~~~~~~l~~~l~  230 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC---------GRI---HTRYSSAYELEGAVK  230 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT---------TSS---EEEECCHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC---------Cee---EeccCCHHHHHHHHc
Confidence            3678999999998 999999999999999999999999887655432221         122   123445555544432


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                             ..|++|++++.... ..   .               ..+.+..++.|++  .+.||++++..
T Consensus       231 -------~aDvVi~~~~~p~~-~t---~---------------~li~~~~l~~mk~--g~~iV~va~~~  271 (377)
T 2vhw_A          231 -------RADLVIGAVLVPGA-KA---P---------------KLVSNSLVAHMKP--GAVLVDIAIDQ  271 (377)
T ss_dssp             -------HCSEEEECCCCTTS-CC---C---------------CCBCHHHHTTSCT--TCEEEEGGGGT
T ss_pred             -------CCCEEEECCCcCCC-CC---c---------------ceecHHHHhcCCC--CcEEEEEecCC
Confidence                   58999999886432 10   0               0112344555643  47899998643

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.86  E-value=6.6e-05  Score=64.52  Aligned_cols=77  Identities=13%  Similarity=0.171  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+||+|++|...+..+...|++|+++ +++++++.. +++.         ...    +| .+.+..+. +.+..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~lG---------a~~----i~-~~~~~~~~-~~~~~  212 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDLG---------ATP----ID-ASREPEDY-AAEHT  212 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHHT---------SEE----EE-TTSCHHHH-HHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHcC---------CCE----ec-cCCCHHHH-HHHHh
Confidence            57999999999999999999999999999998 777665433 2221         121    34 33333333 33322


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .. .++|++|+++|.
T Consensus       213 ~~-~g~D~vid~~g~  226 (343)
T 3gaz_A          213 AG-QGFDLVYDTLGG  226 (343)
T ss_dssp             TT-SCEEEEEESSCT
T ss_pred             cC-CCceEEEECCCc
Confidence            21 369999999983

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.85  E-value=0.00012  Score=54.49  Aligned_cols=73  Identities=16%  Similarity=0.129  Sum_probs=56.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++++|.|+ |.+|..+++.|.+.|++|++++++++..+...    +        ..+.++.+|.++++.++++      .
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~--------~g~~~i~gd~~~~~~l~~a------~   68 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----E--------RGVRAVLGNAANEEIMQLA------H   68 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H--------TTCEEEESCTTSHHHHHHT------T
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----H--------cCCCEEECCCCCHHHHHhc------C
Confidence            56788886 78999999999999999999999987765443    2        1356788999999876553      1


Q ss_pred             CCCccEEEeccc
Q 025705          146 LGPLHVLINNAG  157 (249)
Q Consensus       146 ~g~id~linnag  157 (249)
                      ..+.|.+|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (140)
T 3fwz_A           69 LECAKWLILTIP   80 (140)
T ss_dssp             GGGCSEEEECCS
T ss_pred             cccCCEEEEECC
Confidence            135788888755

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.85  E-value=3.8e-05  Score=59.80  Aligned_cols=78  Identities=14%  Similarity=0.091  Sum_probs=57.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++.+.+++|.| .|.+|..+++.|.+. |++|+++++++++.+..    .+        ..+..+.+|.++.+.+.++  
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~--------~g~~~~~gd~~~~~~l~~~--  100 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH----RS--------EGRNVISGDATDPDFWERI--  100 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HH--------TTCCEEECCTTCHHHHHTB--
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HH--------CCCCEEEcCCCCHHHHHhc--
Confidence            45677888998 589999999999999 99999999998766543    22        1245667899887654321  


Q ss_pred             HHhccCCCccEEEeccc
Q 025705          141 AWNGRLGPLHVLINNAG  157 (249)
Q Consensus       141 ~~~~~~g~id~linnag  157 (249)
                         ....+.|++|.+.+
T Consensus       101 ---~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 ---LDTGHVKLVLLAMP  114 (183)
T ss_dssp             ---CSCCCCCEEEECCS
T ss_pred             ---cCCCCCCEEEEeCC
Confidence               01346899998765

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.85  E-value=6e-05  Score=64.85  Aligned_cols=104  Identities=13%  Similarity=0.046  Sum_probs=67.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++... ++.         .. .  ..|..+.+..++ +.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~G---------a~-~--~~~~~~~~~~~~-v~~~  231 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVG---------AD-Y--VINPFEEDVVKE-VMDI  231 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHT---------CS-E--EECTTTSCHHHH-HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC---------CC-E--EECCCCcCHHHH-HHHH
Confidence            7899999999 9999999999999999 9999999977665432 221         11 1  235554332222 3332


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMH  210 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~  210 (249)
                      ... .++|++|+++|..          +               ..+.+++.+.+  .|+++.+++..+
T Consensus       232 ~~g-~g~D~vid~~g~~----------~---------------~~~~~~~~l~~--~G~iv~~g~~~~  271 (348)
T 2d8a_A          232 TDG-NGVDVFLEFSGAP----------K---------------ALEQGLQAVTP--AGRVSLLGLYPG  271 (348)
T ss_dssp             TTT-SCEEEEEECSCCH----------H---------------HHHHHHHHEEE--EEEEEECCCCSS
T ss_pred             cCC-CCCCEEEECCCCH----------H---------------HHHHHHHHHhc--CCEEEEEccCCC
Confidence            211 2599999999841          1               12334444544  479999987543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.84  E-value=2.8e-05  Score=67.39  Aligned_cols=78  Identities=14%  Similarity=0.156  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+||+|++|...++.+...|++|+++++++++++... ++       +  .. ..  .|..+.+ +.+.+.+..
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~-------G--a~-~~--~~~~~~~-~~~~~~~~~  228 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SL-------G--CD-RP--INYKTEP-VGTVLKQEY  228 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-------T--CS-EE--EETTTSC-HHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-Hc-------C--Cc-EE--EecCChh-HHHHHHHhc
Confidence            5789999999999999999999999999999999977665432 11       1  12 12  3444433 333333332


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                        -+++|++|+|+|
T Consensus       229 --~~g~D~vid~~g  240 (362)
T 2c0c_A          229 --PEGVDVVYESVG  240 (362)
T ss_dssp             --TTCEEEEEECSC
T ss_pred             --CCCCCEEEECCC
Confidence              136999999988

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.82  E-value=0.00035  Score=59.35  Aligned_cols=119  Identities=13%  Similarity=0.132  Sum_probs=74.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEc--ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVR--NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++||||+|.+|.+++..|+.+|.  .++++++  ++++++....++.+...-.+  .++.+...|  |  ++.      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~--~~~~i~~~~--d--~l~------   69 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTR--SDANIYVES--D--ENL------   69 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSC--CCCEEEEEE--T--TCG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcC--CCeEEEeCC--c--chH------
Confidence            589999999999999999999885  6889998  76656555555544221110  122222211  0  111      


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                       +.+.+.|++|+.||.....   ..+   -...++.|+.....+.+++..+-    .+.|+++|.-
T Consensus        70 -~al~gaD~Vi~~Ag~~~~~---g~~---r~dl~~~N~~i~~~i~~~i~~~~----~~~vlv~SNP  124 (313)
T 1hye_A           70 -RIIDESDVVIITSGVPRKE---GMS---RMDLAKTNAKIVGKYAKKIAEIC----DTKIFVITNP  124 (313)
T ss_dssp             -GGGTTCSEEEECCSCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHC----CCEEEECSSS
T ss_pred             -HHhCCCCEEEECCCCCCCC---CCc---HHHHHHHHHHHHHHHHHHHHHhC----CeEEEEecCc
Confidence             1234799999999975311   112   23458889888888888876653    3456665553

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.80  E-value=0.00058  Score=57.72  Aligned_cols=104  Identities=13%  Similarity=0.028  Sum_probs=68.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEc--ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVR--NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++||||+|.+|.+++..|+.+|.  +++++|+  ++++++....++.+... ..  ..+.+.. |  +.+.        
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~--~~~~v~~-~--~~~a--------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA-YD--SNTRVRQ-G--GYED--------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT-TT--CCCEEEE-C--CGGG--------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh-hC--CCcEEEe-C--CHHH--------
Confidence            589999999999999999999885  6899999  77766655555555322 11  1233332 2  2211        


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchh
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPS  193 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~  193 (249)
                         +.+.|++|+.||.....   ..+.   ...+..|+.....+.+.+..+
T Consensus        68 ---~~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~  109 (303)
T 1o6z_A           68 ---TAGSDVVVITAGIPRQP---GQTR---IDLAGDNAPIMEDIQSSLDEH  109 (303)
T ss_dssp             ---GTTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHTT
T ss_pred             ---hCCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH
Confidence               23689999999975311   1122   345788888777777776544

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.75  E-value=0.00012  Score=60.12  Aligned_cols=82  Identities=11%  Similarity=0.182  Sum_probs=59.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCCce
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPLNI  122 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~v  122 (249)
                      +++++|+|.|+ ||+|..+++.|++.|. +|.++|++.                   .+.+...+++.+..+.    .++
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~----~~v  103 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH----IAI  103 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT----SEE
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC----cEE
Confidence            44688999996 6999999999999998 899999987                   7777777777664322    356


Q ss_pred             EEEEccCCCHHHHHHHHHHHhccCCCccEEEeccc
Q 025705          123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAG  157 (249)
Q Consensus       123 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~linnag  157 (249)
                      ..+..++++ +.+.++++       +.|++|++..
T Consensus       104 ~~~~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          104 TPVNALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             EEECSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             EEEeccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            666666653 33333322       5788888754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.74  E-value=0.00013  Score=62.60  Aligned_cols=78  Identities=8%  Similarity=0.077  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+||+|++|...+..+...|++|+.+++++++++...+ +.         .. .+  .|..+ + +.+.+.+. 
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG---------a~-~v--i~~~~-~-~~~~~~~~-  213 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MG---------AD-IV--LNHKE-S-LLNQFKTQ-  213 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HT---------CS-EE--ECTTS-C-HHHHHHHH-
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC---------Cc-EE--EECCc-c-HHHHHHHh-
Confidence            68999999999999999999999999999999998877654432 21         11 12  24332 2 33333333 


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                       ..+.+|++|+++|.
T Consensus       214 -~~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          214 -GIELVDYVFCTFNT  227 (346)
T ss_dssp             -TCCCEEEEEESSCH
T ss_pred             -CCCCccEEEECCCc
Confidence             22369999999884

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.73  E-value=8.2e-05  Score=56.35  Aligned_cols=78  Identities=15%  Similarity=0.160  Sum_probs=55.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +..+++++|.|+ |.+|..+++.|.+.|++|++++|++++.+..    .+   .    .....+..|.++.+.+.+.   
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~----~~---~----~g~~~~~~d~~~~~~l~~~---   80 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRL----NS---E----FSGFTVVGDAAEFETLKEC---   80 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS----CT---T----CCSEEEESCTTSHHHHHTT---
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----Hh---c----CCCcEEEecCCCHHHHHHc---
Confidence            455688999996 9999999999999999999999998765322    10   1    1234566788876544321   


Q ss_pred             HhccCCCccEEEeccc
Q 025705          142 WNGRLGPLHVLINNAG  157 (249)
Q Consensus       142 ~~~~~g~id~linnag  157 (249)
                         ...+.|++|.+.+
T Consensus        81 ---~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 ---GMEKADMVFAFTN   93 (155)
T ss_dssp             ---TGGGCSEEEECSS
T ss_pred             ---CcccCCEEEEEeC
Confidence               1235899999876

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.73  E-value=0.00012  Score=63.57  Aligned_cols=76  Identities=18%  Similarity=0.277  Sum_probs=56.1

Q ss_pred             CCCCCC--EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           61 PPVNDL--TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        61 ~~~~~~--~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ++++|+  .|+|.|| |++|+.+|+.|++ .++|.+.+++.+++++..    +         .+..+.+|+.|.+++.++
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~----~---------~~~~~~~d~~d~~~l~~~   74 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK----E---------FATPLKVDASNFDKLVEV   74 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT----T---------TSEEEECCTTCHHHHHHH
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh----c---------cCCcEEEecCCHHHHHHH
Confidence            345554  5889998 9999999998875 579999999987765542    1         345678999999988776


Q ss_pred             HHHHhccCCCccEEEecccc
Q 025705          139 SEAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~  158 (249)
                      ++       +.|++||+++.
T Consensus        75 ~~-------~~DvVi~~~p~   87 (365)
T 3abi_A           75 MK-------EFELVIGALPG   87 (365)
T ss_dssp             HT-------TCSEEEECCCG
T ss_pred             Hh-------CCCEEEEecCC
Confidence            54       57999999875

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.72  E-value=5.8e-05  Score=63.93  Aligned_cols=99  Identities=17%  Similarity=0.200  Sum_probs=61.5

Q ss_pred             CCCCE-EEEeCCCC-----------------c-hHHHHHHHHHHcCCEEEEEEcChHHHHHHH-----HHHHHhh-cCCC
Q 025705           63 VNDLT-CIVTGSTS-----------------G-IGREIARQLAESGAHVVMAVRNLKAANELI-----QKWQEEW-SGKG  117 (249)
Q Consensus        63 ~~~~~-vlItGas~-----------------g-IG~~ia~~l~~~G~~Vil~~r~~~~~~~~~-----~~~~~~~-~~~~  117 (249)
                      +.|+. ||||+|..                 | .|.++|+.++++|+.|+++.+... +....     ..+.+.. ....
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECCC
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhccccc
Confidence            45676 99998754                 5 999999999999999999988532 11000     0000100 0000


Q ss_pred             CCCceEEEEccCCCHHHHHHHHHHH------------------------------hccCCCccEEEeccccCCCC
Q 025705          118 LPLNIEAMELDLLSLDSVVRFSEAW------------------------------NGRLGPLHVLINNAGIFSIG  162 (249)
Q Consensus       118 ~~~~v~~~~~D~~~~~~v~~~~~~~------------------------------~~~~g~id~linnag~~~~~  162 (249)
                      ....+..+.+|+...+++.+.+.+.                              .+.+++.|++|.+|+++...
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence            0112445666777766666666443                              23457899999999997654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.69  E-value=5.2e-05  Score=63.88  Aligned_cols=42  Identities=12%  Similarity=0.130  Sum_probs=37.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .|++++|+|++|++|...+..+...|++|+.+++++++++..
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999998776543

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.67  E-value=7.2e-05  Score=64.21  Aligned_cols=77  Identities=18%  Similarity=0.167  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++ .        .    ...|..+.+ +.+.+.++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a--------~----~v~~~~~~~-~~~~~~~~  227 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-A--------D----RLVNPLEED-LLEVVRRV  227 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-C--------S----EEECTTTSC-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-H--------H----hccCcCccC-HHHHHHHh
Confidence            6899999999 9999999998888999 9999999976654321 11 0        1    123555433 33333333


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      .  ..++|++|+++|.
T Consensus       228 ~--~~g~D~vid~~g~  241 (343)
T 2dq4_A          228 T--GSGVEVLLEFSGN  241 (343)
T ss_dssp             H--SSCEEEEEECSCC
T ss_pred             c--CCCCCEEEECCCC
Confidence            3  2369999999984

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.66  E-value=0.00031  Score=60.61  Aligned_cols=83  Identities=13%  Similarity=0.052  Sum_probs=58.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|.|+ |++|...+..+...|++ |+++++++++++... ++ .        ..+..+..|-.+.+++.+.+.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~--------~~~~~~~~~~~~~~~~~~~v~~~  247 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C--------PEVVTHKVERLSAEESAKKIVES  247 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C--------TTCEEEECCSCCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c--------hhcccccccccchHHHHHHHHHH
Confidence            5789999998 99999999888889997 899999987765443 32 2        23444555655556555544444


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ... .++|++|.++|.
T Consensus       248 t~g-~g~Dvvid~~g~  262 (363)
T 3m6i_A          248 FGG-IEPAVALECTGV  262 (363)
T ss_dssp             TSS-CCCSEEEECSCC
T ss_pred             hCC-CCCCEEEECCCC
Confidence            321 369999999884

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.63  E-value=0.0003  Score=60.52  Aligned_cols=81  Identities=20%  Similarity=0.126  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~  142 (249)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++++... ++       +  .. .+  .|..+ .+..+++.+..
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-------G--a~-~~--~~~~~~~~~~~~i~~~~  233 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-------G--AD-VT--LVVDPAKEEESSIIERI  233 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-------T--CS-EE--EECCTTTSCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-------C--CC-EE--EcCcccccHHHHHHHHh
Confidence            5789999997 89999999988889999999999987765432 21       1  12 12  24443 33233333222


Q ss_pred             hc-cCCCccEEEecccc
Q 025705          143 NG-RLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~-~~g~id~linnag~  158 (249)
                      .+ .-+++|++|+++|.
T Consensus       234 ~~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          234 RSAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHHSSSCCSEEEECSCC
T ss_pred             ccccCCCCCEEEECCCC
Confidence            10 01369999999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.60  E-value=0.00049  Score=57.79  Aligned_cols=92  Identities=10%  Similarity=0.225  Sum_probs=66.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh------------------HHHHHHHHHHHHhhcCCCCCC
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL------------------KAANELIQKWQEEWSGKGLPL  120 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~------------------~~~~~~~~~~~~~~~~~~~~~  120 (249)
                      ..++++++|+|.|+ ||+|..+++.|++.|. ++.++|.+.                  .+.+...+.+.+..+    ..
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP----~v  105 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP----DV  105 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT----TS
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC----Cc
Confidence            34577889999987 5999999999999998 899998765                  566667777766433    25


Q ss_pred             ceEEEEccCCCHHHHHHHHHHHhcc----CCCccEEEecc
Q 025705          121 NIEAMELDLLSLDSVVRFSEAWNGR----LGPLHVLINNA  156 (249)
Q Consensus       121 ~v~~~~~D~~~~~~v~~~~~~~~~~----~g~id~linna  156 (249)
                      ++..+..++++.+.++.+++.+...    ..+.|++|.+.
T Consensus       106 ~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          106 LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             EEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             EEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            7788878888777777776544211    13578888663

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.54  E-value=0.00053  Score=54.79  Aligned_cols=73  Identities=15%  Similarity=0.146  Sum_probs=55.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .++|.|+ |.+|..+|+.|.+.|++|++++++++..++..++           ..+.++.+|.++.+.++++      ..
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-----------~~~~~i~gd~~~~~~l~~a------~i   63 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-----------LKATIIHGDGSHKEILRDA------EV   63 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-----------SSSEEEESCTTSHHHHHHH------TC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-----------cCCeEEEcCCCCHHHHHhc------Cc
Confidence            4889996 8999999999999999999999998876654322           1356778899888766543      12


Q ss_pred             CCccEEEeccc
Q 025705          147 GPLHVLINNAG  157 (249)
Q Consensus       147 g~id~linnag  157 (249)
                      .+.|++|.+.+
T Consensus        64 ~~ad~vi~~~~   74 (218)
T 3l4b_C           64 SKNDVVVILTP   74 (218)
T ss_dssp             CTTCEEEECCS
T ss_pred             ccCCEEEEecC
Confidence            35778777665

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.52  E-value=0.00018  Score=62.56  Aligned_cols=78  Identities=18%  Similarity=0.293  Sum_probs=52.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|++|+|+||+|++|...+..+...|++|+.++ +.++.+.. +++    .     .. .+  .|..+.+..+    ++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l----G-----a~-~v--~~~~~~~~~~----~~  243 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL----G-----AD-DV--IDYKSGSVEE----QL  243 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT----T-----CS-EE--EETTSSCHHH----HH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc----C-----CC-EE--EECCchHHHH----HH
Confidence            4689999999999999999998888999999888 44444322 221    1     11 12  3555433222    22


Q ss_pred             hccCCCccEEEeccccC
Q 025705          143 NGRLGPLHVLINNAGIF  159 (249)
Q Consensus       143 ~~~~g~id~linnag~~  159 (249)
                      .+ .+++|++|+++|..
T Consensus       244 ~~-~~g~D~vid~~g~~  259 (375)
T 2vn8_A          244 KS-LKPFDFILDNVGGS  259 (375)
T ss_dssp             HT-SCCBSEEEESSCTT
T ss_pred             hh-cCCCCEEEECCCCh
Confidence            22 25799999999853

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.49  E-value=9.7e-05  Score=55.22  Aligned_cols=44  Identities=20%  Similarity=0.301  Sum_probs=38.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~  109 (249)
                      +++++|.|+ |++|..+++.|.+.|++|++++|++++.++..+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            789999996 99999999999999999999999998877665543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.44  E-value=0.0012  Score=54.74  Aligned_cols=41  Identities=17%  Similarity=0.311  Sum_probs=38.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELI  106 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~  106 (249)
                      ++.++|.|+ ||.|++++..|++.|.+|.++.|+.+++++.+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            799999997 89999999999999999999999999887776

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.42  E-value=0.00049  Score=59.14  Aligned_cols=119  Identities=11%  Similarity=0.064  Sum_probs=71.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +.++.+.|+|++|.+|..+|..++.+|.  +|+++|+++++++....++.... -  ...++.+ .   +|.   .+.  
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~--~~~~i~~-t---~d~---~~a--   73 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-F--EGLNLTF-T---SDI---KEA--   73 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-C--TTCCCEE-E---SCH---HHH--
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-C--CCCceEE-c---CCH---HHH--
Confidence            4567899999999999999999999994  79999999988887777776631 0  1112221 1   121   111  


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCe-EEEEcC
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSR-IINVNS  207 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~-Iv~vsS  207 (249)
                       +    .+-|++|.+||....   ...+   -...++.|..-...+.+.+..+-   ..+. |+++|-
T Consensus        74 -l----~dADvVvitaG~p~k---pG~~---R~dLl~~N~~I~~~i~~~i~~~~---p~a~~vlvvsN  127 (343)
T 3fi9_A           74 -L----TDAKYIVSSGGAPRK---EGMT---REDLLKGNAEIAAQLGKDIKSYC---PDCKHVIIIFN  127 (343)
T ss_dssp             -H----TTEEEEEECCC----------C---HHHHHHHHHHHHHHHHHHHHHHC---TTCCEEEECSS
T ss_pred             -h----CCCCEEEEccCCCCC---CCCC---HHHHHHHHHHHHHHHHHHHHHhc---cCcEEEEEecC
Confidence             1    268999999997421   1112   23445666554444444443332   2343 566654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.41  E-value=0.00057  Score=60.09  Aligned_cols=46  Identities=30%  Similarity=0.554  Sum_probs=40.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQK  108 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~  108 (249)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.+++++..++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~  210 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD  210 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            467999999998 9999999999999999 999999998877655544

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.40  E-value=0.0012  Score=57.33  Aligned_cols=80  Identities=11%  Similarity=0.077  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC--CHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL--SLDSVVRFSE  140 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~  140 (249)
                      .|++|+|+| +|++|...+..+...| ++|+.+++++++++... ++       +  .. .+  .|..  +.+++.+.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-------G--a~-~v--i~~~~~~~~~~~~~v~  260 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-------G--AD-LT--LNRRETSVEERRKAIM  260 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-------T--CS-EE--EETTTSCHHHHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-------C--Cc-EE--EeccccCcchHHHHHH
Confidence            578999999 8999999999888899 59999999987765432 21       1  11 22  2433  2344433333


Q ss_pred             HHhccCCCccEEEecccc
Q 025705          141 AWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       141 ~~~~~~g~id~linnag~  158 (249)
                      +.... .++|++|+++|.
T Consensus       261 ~~~~g-~g~Dvvid~~g~  277 (380)
T 1vj0_A          261 DITHG-RGADFILEATGD  277 (380)
T ss_dssp             HHTTT-SCEEEEEECSSC
T ss_pred             HHhCC-CCCcEEEECCCC
Confidence            33221 159999999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.35  E-value=0.0019  Score=55.01  Aligned_cols=120  Identities=8%  Similarity=-0.012  Sum_probs=68.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +..++.+.|+|+ |.+|.++|..|+..|.  +|+++|+++++++....++....+-.   ..+.....|   .       
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~---~~~~i~~~~---~-------   71 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFT---SPKKIYSAE---Y-------   71 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGS---CCCEEEECC---G-------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhc---CCcEEEECc---H-------
Confidence            445678999996 9999999999999987  89999999998888877777643210   123333222   1       


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                          +.+.+-|++|+.||.... +  .   +.-...++.|.--...+++.+..+-   ..+.++++|--
T Consensus        72 ----~a~~~aDiVvi~ag~~~k-p--G---~tR~dL~~~N~~I~~~i~~~i~~~~---p~a~ilvvtNP  127 (326)
T 3vku_A           72 ----SDAKDADLVVITAGAPQK-P--G---ETRLDLVNKNLKILKSIVDPIVDSG---FNGIFLVAANP  127 (326)
T ss_dssp             ----GGGTTCSEEEECCCCC----------------------CHHHHHHHHHTTT---CCSEEEECSSS
T ss_pred             ----HHhcCCCEEEECCCCCCC-C--C---chHHHHHHHHHHHHHHHHHHHHhcC---CceEEEEccCc
Confidence                123468999999997431 1  1   1223345556544444444443322   23566666543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.35  E-value=0.00073  Score=59.39  Aligned_cols=43  Identities=16%  Similarity=0.103  Sum_probs=38.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .+.+++|+|+|+ |.+|..+++.+...|++|+++++++++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367899999996 8999999999999999999999998876554

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.34  E-value=0.0038  Score=53.23  Aligned_cols=118  Identities=11%  Similarity=-0.046  Sum_probs=75.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ...+.|+|+ |.+|.++|..|+..|.  +|+++|+++++++..+.++.+..+-..  ..+.....|.             
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~--~~v~i~~~~~-------------   68 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAP--QPVKTSYGTY-------------   68 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSS--SCCEEEEECG-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcccccc--CCeEEEeCcH-------------
Confidence            357899996 9999999999999997  899999999988887777776432111  1233332221             


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                       +.+.+-|++|.++|.... +  ..+.   ...++.|..-.-.+.+.+..+-   ..+.|+++|--
T Consensus        69 -~a~~~aDvVvi~ag~p~k-p--G~~R---~dL~~~N~~Iv~~i~~~I~~~~---p~a~vlvvtNP  124 (326)
T 3pqe_A           69 -EDCKDADIVCICAGANQK-P--GETR---LELVEKNLKIFKGIVSEVMASG---FDGIFLVATNP  124 (326)
T ss_dssp             -GGGTTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHTT---CCSEEEECSSS
T ss_pred             -HHhCCCCEEEEecccCCC-C--CccH---HHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcCCh
Confidence             112368999999997421 1  1222   3346666555445555543332   23567776654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.32  E-value=0.0013  Score=56.88  Aligned_cols=78  Identities=15%  Similarity=0.150  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+| +|++|...+..+...|++|+++++++++++.. +++.         .. .+  .| .+.+++.+.+.++.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lG---------a~-~v--i~-~~~~~~~~~v~~~~  253 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALG---------AD-HG--IN-RLEEDWVERVYALT  253 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT---------CS-EE--EE-TTTSCHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcC---------CC-EE--Ec-CCcccHHHHHHHHh
Confidence            578999999 88999999998888999999999998776553 2221         11 12  24 33233333333333


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      .. .++|++|+++|
T Consensus       254 ~g-~g~D~vid~~g  266 (363)
T 3uog_A          254 GD-RGADHILEIAG  266 (363)
T ss_dssp             TT-CCEEEEEEETT
T ss_pred             CC-CCceEEEECCC
Confidence            21 26999999998

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.31  E-value=0.00015  Score=61.73  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=48.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +|+|+||+|++|...++.+...|++|+.+++++++++... ++    .     .. .+  .|..+.+  .+.++++.  .
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l----G-----a~-~~--i~~~~~~--~~~~~~~~--~  214 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL----G-----AK-EV--LAREDVM--AERIRPLD--K  214 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT----T-----CS-EE--EECC-----------CC--S
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc----C-----Cc-EE--EecCCcH--HHHHHHhc--C
Confidence            7999999999999999999899999999999877665442 21    1     11 11  3444432  22222222  2


Q ss_pred             CCccEEEecccc
Q 025705          147 GPLHVLINNAGI  158 (249)
Q Consensus       147 g~id~linnag~  158 (249)
                      +++|++|+++|.
T Consensus       215 ~~~d~vid~~g~  226 (328)
T 1xa0_A          215 QRWAAAVDPVGG  226 (328)
T ss_dssp             CCEEEEEECSTT
T ss_pred             CcccEEEECCcH
Confidence            369999999984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.30  E-value=0.0008  Score=57.15  Aligned_cols=117  Identities=13%  Similarity=0.117  Sum_probs=68.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|+||+|.+|..++..|+.+|  ..|+++|+++  .+....++.+..    ...++....    ..++.++.+     
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~----~~~~l~~~~----~t~d~~~a~-----   66 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE----TRATVKGYL----GPEQLPDCL-----   66 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS----SSCEEEEEE----SGGGHHHHH-----
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC----cCceEEEec----CCCCHHHHh-----
Confidence            48999999999999999999988  6899999987  333334443311    111222221    011222222     


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM  209 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~  209 (249)
                        .+.|++|+.+|.....   ..+..   ..+..|.-....+.+.+..+.   ..+.|+++|--.
T Consensus        67 --~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~~---p~a~viv~sNPv  120 (314)
T 1mld_A           67 --KGCDVVVIPAGVPRKP---GMTRD---DLFNTNATIVATLTAACAQHC---PDAMICIISNPV  120 (314)
T ss_dssp             --TTCSEEEECCSCCCCT---TCCGG---GGHHHHHHHHHHHHHHHHHHC---TTSEEEECSSCH
T ss_pred             --CCCCEEEECCCcCCCC---CCcHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCCc
Confidence              2689999999985321   11221   235666665555555554433   236777765543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.29  E-value=0.00064  Score=58.62  Aligned_cols=38  Identities=16%  Similarity=0.116  Sum_probs=33.3

Q ss_pred             CC-CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH
Q 025705           64 ND-LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA  101 (249)
Q Consensus        64 ~~-~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~  101 (249)
                      .| .+|+|+||+|++|...+..+...|++|++++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            47 899999999999999888888889999998877655

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.28  E-value=0.00015  Score=60.60  Aligned_cols=43  Identities=21%  Similarity=0.326  Sum_probs=37.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANEL  105 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~  105 (249)
                      ++++++++|+|+ ||+|++++..|++.|+ +|.+++|+.++.++.
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            467899999997 7999999999999999 899999998765443

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.26  E-value=0.003  Score=54.31  Aligned_cols=79  Identities=22%  Similarity=0.186  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC--CHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL--SLDSVVRFSE  140 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~  140 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++       +  .. .+  .|..  +.++..+.+.
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-------G--a~-~v--i~~~~~~~~~~~~~i~  236 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-------G--AD-LV--LQISKESPQEIARKVE  236 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-------T--CS-EE--EECSSCCHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-------C--CC-EE--EcCcccccchHHHHHH
Confidence            5789999996 8999999888888999 8999999987654332 21       1  11 22  3444  2233333233


Q ss_pred             HHhccCCCccEEEecccc
Q 025705          141 AWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       141 ~~~~~~g~id~linnag~  158 (249)
                      +...  +++|++|+++|.
T Consensus       237 ~~~~--~g~D~vid~~g~  252 (356)
T 1pl8_A          237 GQLG--CKPEVTIECTGA  252 (356)
T ss_dssp             HHHT--SCCSEEEECSCC
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3222  469999999884

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.26  E-value=0.0065  Score=51.85  Aligned_cols=122  Identities=11%  Similarity=-0.017  Sum_probs=74.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .....+.+.|+|+ |.+|.++|..|+.+|.  +|+++|+++++++..+.++..-..-.   .....+..  .|.+     
T Consensus        15 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~---~~~~i~~~--~d~~-----   83 (331)
T 4aj2_A           15 EQVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFL---KTPKIVSS--KDYS-----   83 (331)
T ss_dssp             --CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGC---SCCEEEEC--SSGG-----
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhcc---CCCeEEEc--CCHH-----
Confidence            4556788999998 8999999999999997  89999999988888888887632110   01112211  1211     


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                            ...+-|++|.+||....   ...+.+   ..++.|.--...+.+.+..+   ...+.++++|--
T Consensus        84 ------~~~~aDiVvi~aG~~~k---pG~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  138 (331)
T 4aj2_A           84 ------VTANSKLVIITAGARQQ---EGESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNP  138 (331)
T ss_dssp             ------GGTTEEEEEECCSCCCC---TTCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             ------HhCCCCEEEEccCCCCC---CCccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCh
Confidence                  12368999999997532   122322   34555544444444444333   123566666653

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.24  E-value=0.0011  Score=54.49  Aligned_cols=63  Identities=21%  Similarity=0.279  Sum_probs=44.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCCce
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPLNI  122 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~v  122 (249)
                      +++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+..++++.+..+.    .++
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~----~~v  100 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD----IQL  100 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT----SEE
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC----CEE
Confidence            45688999998 5799999999999998 788886542                   5667777777664322    345


Q ss_pred             EEEEccCC
Q 025705          123 EAMELDLL  130 (249)
Q Consensus       123 ~~~~~D~~  130 (249)
                      ..+..+++
T Consensus       101 ~~~~~~~~  108 (251)
T 1zud_1          101 TALQQRLT  108 (251)
T ss_dssp             EEECSCCC
T ss_pred             EEEeccCC
Confidence            55544443

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.23  E-value=0.00072  Score=57.79  Aligned_cols=78  Identities=13%  Similarity=0.146  Sum_probs=53.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|++|+|+|+ |++|...+..+...|++|+.+++++++++.. +++    .     .. .  ..|..+.+..+.+.+  
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l----G-----a~-~--~i~~~~~~~~~~~~~--  228 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL----G-----AE-V--AVNARDTDPAAWLQK--  228 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT----T-----CS-E--EEETTTSCHHHHHHH--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc----C-----CC-E--EEeCCCcCHHHHHHH--
Confidence            35789999997 8999999988888999999999998776543 221    1     11 1  235555443333333  


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                        ..+++|++|.++|.
T Consensus       229 --~~g~~d~vid~~g~  242 (340)
T 3s2e_A          229 --EIGGAHGVLVTAVS  242 (340)
T ss_dssp             --HHSSEEEEEESSCC
T ss_pred             --hCCCCCEEEEeCCC
Confidence              23579999999873

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.22  E-value=0.00096  Score=57.53  Aligned_cols=78  Identities=13%  Similarity=0.080  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|+|+ |++|...+..+... |++|+.+++++++++... ++    .     .. .+  .|..+.  +.+.+.++
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l----G-----a~-~v--i~~~~~--~~~~v~~~  249 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL----G-----AD-HV--VDARRD--PVKQVMEL  249 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT----T-----CS-EE--EETTSC--HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh----C-----CC-EE--Eeccch--HHHHHHHH
Confidence            5789999999 89999998888888 999999999987765432 21    1     11 12  355543  33333443


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ... .++|++|.++|.
T Consensus       250 ~~g-~g~Dvvid~~G~  264 (359)
T 1h2b_A          250 TRG-RGVNVAMDFVGS  264 (359)
T ss_dssp             TTT-CCEEEEEESSCC
T ss_pred             hCC-CCCcEEEECCCC
Confidence            321 269999999985

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.21  E-value=0.00067  Score=58.79  Aligned_cols=79  Identities=14%  Similarity=0.208  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~  141 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++       +  .. .+  .|..+ .+++.+.+.+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-------G--a~-~v--i~~~~~~~~~~~~~~~  257 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-------G--AT-DF--VNPNDHSEPISQVLSK  257 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-------T--CC-EE--ECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-------C--Cc-eE--EeccccchhHHHHHHH
Confidence            5789999995 8999999998888999 8999999988765432 21       1  11 11  35443 1234444444


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +++|++|+++|.
T Consensus       258 ~~~--~g~D~vid~~g~  272 (374)
T 1cdo_A          258 MTN--GGVDFSLECVGN  272 (374)
T ss_dssp             HHT--SCBSEEEECSCC
T ss_pred             HhC--CCCCEEEECCCC
Confidence            433  479999999985

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.16  E-value=0.0027  Score=55.18  Aligned_cols=43  Identities=16%  Similarity=0.130  Sum_probs=38.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .+++++|+|.|+ |.+|..+++.+...|++|++++|++++++..
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  223 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQV  223 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            457889999999 6999999999999999999999999877655

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.16  E-value=0.00076  Score=58.47  Aligned_cols=81  Identities=20%  Similarity=0.190  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+.. +++.         .. .  ..|.++.+..+.+.+..
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lG---------a~-~--vi~~~~~~~~~~i~~~~  247 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEVG---------AT-A--TVDPSAGDVVEAIAGPV  247 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHT---------CS-E--EECTTSSCHHHHHHSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcC---------CC-E--EECCCCcCHHHHHHhhh
Confidence            4789999998 8999999988888999 899999988765433 2221         11 1  23555544332222110


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ....+++|++|.++|.
T Consensus       248 ~~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          248 GLVPGGVDVVIECAGV  263 (370)
T ss_dssp             SSSTTCEEEEEECSCC
T ss_pred             hccCCCCCEEEECCCC
Confidence            0122479999999884

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.16  E-value=0.00077  Score=58.40  Aligned_cols=79  Identities=16%  Similarity=0.220  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~  141 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++       +  .. .+  .|..+ .+++.+.+.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-------G--a~-~v--i~~~~~~~~~~~~~~~  256 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-------G--AT-EC--VNPQDYKKPIQEVLTE  256 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-------T--CS-EE--ECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-------C--Cc-eE--ecccccchhHHHHHHH
Confidence            5789999995 8999999998888999 8999999988765432 21       1  11 11  34443 1234444444


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +++|++|+++|.
T Consensus       257 ~~~--~g~D~vid~~g~  271 (374)
T 2jhf_A          257 MSN--GGVDFSFEVIGR  271 (374)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             HhC--CCCcEEEECCCC
Confidence            433  479999999985

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.13  E-value=0.0011  Score=57.47  Aligned_cols=74  Identities=18%  Similarity=0.173  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|.+|+|+|+ |++|...+..+...|++|+.+++++++++... ++.         .. .  ..|..+.+.++    ++.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lG---------a~-~--vi~~~~~~~~~----~~~  255 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALG---------AD-E--VVNSRNADEMA----AHL  255 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHT---------CS-E--EEETTCHHHHH----TTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---------Cc-E--EeccccHHHHH----Hhh
Confidence            5789999998 89999999888889999999999988765443 221         11 1  23555554332    222


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                         +++|++|+++|.
T Consensus       256 ---~g~Dvvid~~g~  267 (369)
T 1uuf_A          256 ---KSFDFILNTVAA  267 (369)
T ss_dssp             ---TCEEEEEECCSS
T ss_pred             ---cCCCEEEECCCC
Confidence               479999999985

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.13  E-value=0.00093  Score=57.84  Aligned_cols=79  Identities=14%  Similarity=0.170  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~  141 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++.         .. .+  .|..+ .+++.+.+.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lG---------a~-~v--i~~~~~~~~~~~~v~~  255 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFG---------AT-EC--INPQDFSKPIQEVLIE  255 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHT---------CS-EE--ECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcC---------Cc-eE--eccccccccHHHHHHH
Confidence            5789999996 8999999988888899 8999999988765442 221         11 11  34443 1233344444


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +++|++|+++|.
T Consensus       256 ~~~--~g~D~vid~~g~  270 (373)
T 2fzw_A          256 MTD--GGVDYSFECIGN  270 (373)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             HhC--CCCCEEEECCCc
Confidence            433  479999999884

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.12  E-value=0.00051  Score=59.28  Aligned_cols=74  Identities=16%  Similarity=0.175  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL-DSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~  142 (249)
                      .|++|+|+|+ |++|...+..+...|++|+.+++++++++... ++.         .. .+  .|..+. +.    .+++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lG---------a~-~v--~~~~~~~~~----~~~~  240 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMG---------AD-HY--IATLEEGDW----GEKY  240 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHT---------CS-EE--EEGGGTSCH----HHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcC---------CC-EE--EcCcCchHH----HHHh
Confidence            5789999999 99999999888889999999999887765442 221         11 12  244333 22    2222


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      .   +++|++|+++|.
T Consensus       241 ~---~~~D~vid~~g~  253 (360)
T 1piw_A          241 F---DTFDLIVVCASS  253 (360)
T ss_dssp             C---SCEEEEEECCSC
T ss_pred             h---cCCCEEEECCCC
Confidence            2   479999999985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.11  E-value=0.00078  Score=58.61  Aligned_cols=80  Identities=16%  Similarity=0.172  Sum_probs=53.9

Q ss_pred             CCCEEEEeC-CCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTG-STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItG-as~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|.+|+|.| |+|++|...+..+...|++|+.+++++++++... +    +.     .. .+  .|..+.+..+++.+..
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~----lG-----a~-~~--~~~~~~~~~~~v~~~t  236 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-A----QG-----AV-HV--CNAASPTFMQDLTEAL  236 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-H----TT-----CS-CE--EETTSTTHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h----CC-----Cc-EE--EeCCChHHHHHHHHHh
Confidence            467899987 9999999999888889999999999987765442 1    11     11 12  3444443333333322


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  .++|++|.++|.
T Consensus       237 ~~--~g~d~v~d~~g~  250 (379)
T 3iup_A          237 VS--TGATIAFDATGG  250 (379)
T ss_dssp             HH--HCCCEEEESCEE
T ss_pred             cC--CCceEEEECCCc
Confidence            22  269999999985

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.09  E-value=0.00097  Score=57.10  Aligned_cols=117  Identities=12%  Similarity=0.085  Sum_probs=68.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--E-----EEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--H-----VVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~-----Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      ..|.||||+|.||.+++..|+..|.  +     ++++|+++  +.++..+.++..-..     ..+.  ...+++  ...
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~-----~~~~--~~~~~~--~~~   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-----PLLK--DVIATD--KEE   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-----TTEE--EEEEES--CHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh-----cccC--CEEEcC--CcH
Confidence            4699999999999999999998876  4     99999975  456666666655210     0111  111111  111


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CC-eEEEEcCC
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PS-RIINVNSV  208 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g-~Iv~vsS~  208 (249)
                      +.       +.+.|++|+.||.... +  ..+   -...++.|......+.+.+    .+.. .+ .|+++|--
T Consensus        75 ~~-------~~daDvVvitAg~prk-p--G~t---R~dll~~N~~i~~~i~~~i----~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           75 IA-------FKDLDVAILVGSMPRR-D--GME---RKDLLKANVKIFKCQGAAL----DKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             HH-------TTTCSEEEECCSCCCC-T--TCC---TTTTHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSS
T ss_pred             HH-------hCCCCEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCCc
Confidence            11       2368999999997531 1  112   2234566655544444444    3333 24 46666653

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.09  E-value=0.0016  Score=57.08  Aligned_cols=80  Identities=14%  Similarity=0.180  Sum_probs=53.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..|.+|+|+|+ |++|...+..+...|+ +|+.+++++++++.. +++.         .. .+  .|..+.+..+++ .+
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lG---------a~-~v--i~~~~~~~~~~i-~~  276 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELG---------AD-HV--IDPTKENFVEAV-LD  276 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHT---------CS-EE--ECTTTSCHHHHH-HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcC---------CC-EE--EcCCCCCHHHHH-HH
Confidence            45789999998 8999999888888999 899999998776533 2221         11 12  355444433333 22


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +... .++|++|.++|.
T Consensus       277 ~t~g-~g~D~vid~~g~  292 (404)
T 3ip1_A          277 YTNG-LGAKLFLEATGV  292 (404)
T ss_dssp             HTTT-CCCSEEEECSSC
T ss_pred             HhCC-CCCCEEEECCCC
Confidence            2211 259999999985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.09  E-value=0.0015  Score=56.57  Aligned_cols=79  Identities=11%  Similarity=0.119  Sum_probs=52.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|++|+|.||+|++|...+..+...|++|+.+. ++++++ .++++    .     .. .+  .|..+.+..++ +.+.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l----G-----a~-~v--i~~~~~~~~~~-v~~~  227 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR----G-----AE-EV--FDYRAPNLAQT-IRTY  227 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT----T-----CS-EE--EETTSTTHHHH-HHHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc----C-----Cc-EE--EECCCchHHHH-HHHH
Confidence            5789999999999999999999989999998886 555544 22221    1     11 12  35555443333 3333


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  +++|++|.++|.
T Consensus       228 t~--g~~d~v~d~~g~  241 (371)
T 3gqv_A          228 TK--NNLRYALDCITN  241 (371)
T ss_dssp             TT--TCCCEEEESSCS
T ss_pred             cc--CCccEEEECCCc
Confidence            22  459999999985

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.08  E-value=0.00062  Score=59.15  Aligned_cols=79  Identities=15%  Similarity=0.180  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~  141 (249)
                      .|.+|+|+|+ |++|...+..+...|+ +|+.+++++++++.. +++       +  .. .  ..|..+ .+++.+.+.+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l-------G--a~-~--vi~~~~~~~~~~~~i~~  258 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF-------G--VN-E--FVNPKDHDKPIQEVIVD  258 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT-------T--CC-E--EECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-------C--Cc-E--EEccccCchhHHHHHHH
Confidence            5789999998 9999999988888999 899999998876533 211       1  11 1  234442 2334444444


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +++|++|.++|.
T Consensus       259 ~~~--gg~D~vid~~g~  273 (378)
T 3uko_A          259 LTD--GGVDYSFECIGN  273 (378)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             hcC--CCCCEEEECCCC
Confidence            433  379999999884

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.07  E-value=0.0027  Score=54.80  Aligned_cols=79  Identities=10%  Similarity=0.145  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~-~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      -.|++|+|+||+|++|...+..+.. .|++|+.+++++++.+... ++    .     .. .+  .|..+  ++.+.+.+
T Consensus       170 ~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l----G-----ad-~v--i~~~~--~~~~~v~~  234 (363)
T 4dvj_A          170 GAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL----G-----AH-HV--IDHSK--PLAAEVAA  234 (363)
T ss_dssp             TSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT----T-----CS-EE--ECTTS--CHHHHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc----C-----CC-EE--EeCCC--CHHHHHHH
Confidence            3688999999999999887766655 5899999999987665432 21    1     11 12  24433  22222222


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      .  ..+++|++|.++|.
T Consensus       235 ~--~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          235 L--GLGAPAFVFSTTHT  249 (363)
T ss_dssp             T--CSCCEEEEEECSCH
T ss_pred             h--cCCCceEEEECCCc
Confidence            2  22469999999884

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.05  E-value=0.001  Score=56.89  Aligned_cols=77  Identities=13%  Similarity=0.090  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAES--GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .|++|+|+|+ |++|...++.+...  |++|+.+++++++++... ++.         .. .+  .|..+.   ...+++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lG---------a~-~v--i~~~~~---~~~~~~  232 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELG---------AD-YV--SEMKDA---ESLINK  232 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHT---------CS-EE--ECHHHH---HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhC---------CC-EE--eccccc---hHHHHH
Confidence            5799999999 89999999888888  999999999987765432 221         11 11  233320   122333


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +.+ -.++|++|+++|.
T Consensus       233 ~~~-g~g~D~vid~~g~  248 (344)
T 2h6e_A          233 LTD-GLGASIAIDLVGT  248 (344)
T ss_dssp             HHT-TCCEEEEEESSCC
T ss_pred             hhc-CCCccEEEECCCC
Confidence            332 1269999999984

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.04  E-value=0.0065  Score=51.72  Aligned_cols=121  Identities=14%  Similarity=0.080  Sum_probs=70.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++...+.|+|+ |.+|.+++..|+..|. +|+++|+++++++....++.+.........++.. ..|   .+        
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~--------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA--------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG--------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH--------
Confidence            34567999998 9999999999999998 9999999998877666666553210001122222 122   11        


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                         .+.+-|++|+.+|.....   ..+.   ...++.|..-.-.+.+.+..+-   ..+.++++|--
T Consensus        72 ---a~~~aDiVIiaag~p~k~---G~~R---~dl~~~N~~i~~~i~~~i~~~~---p~a~iivvtNP  126 (324)
T 3gvi_A           72 ---AIEGADVVIVTAGVPRKP---GMSR---DDLLGINLKVMEQVGAGIKKYA---PEAFVICITNP  126 (324)
T ss_dssp             ---GGTTCSEEEECCSCCCC-----------CHHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSS
T ss_pred             ---HHCCCCEEEEccCcCCCC---CCCH---HHHHHhhHHHHHHHHHHHHHHC---CCeEEEecCCC
Confidence               123689999999975321   1121   1234445443333444433321   23566666643

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.03  E-value=0.00094  Score=57.55  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+|+ |++|...+..+...|++|+.+++++++.+...++    +.     .. .+  .|..+.+.++    +  
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~----lG-----a~-~v--i~~~~~~~~~----~--  240 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD----LG-----AD-DY--VIGSDQAKMS----E--  240 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT----SC-----CS-CE--EETTCHHHHH----H--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----cC-----Cc-ee--eccccHHHHH----H--
Confidence            5789999995 9999999988888899999999998766443211    11     11 11  2444543322    2  


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                       ..+++|++|.++|.
T Consensus       241 -~~~g~D~vid~~g~  254 (357)
T 2cf5_A          241 -LADSLDYVIDTVPV  254 (357)
T ss_dssp             -STTTEEEEEECCCS
T ss_pred             -hcCCCCEEEECCCC
Confidence             22479999999985

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.03  E-value=0.023  Score=47.62  Aligned_cols=116  Identities=12%  Similarity=0.044  Sum_probs=69.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|+|+ |.+|.++|..|+..|.  +|+++|+++++++....++...........++.. ..|   .+           
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d---~~-----------   65 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG-GAD---YS-----------   65 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE-ESC---GG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE-eCC---HH-----------
Confidence            4789999 9999999999999998  8999999998877555555443221111122222 112   22           


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSV  208 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~  208 (249)
                      .+.+-|++|..+|....   ...+.   ...++.|.--    .+.+.+.+.+. ..+.|+++|--
T Consensus        66 a~~~aDiVViaag~~~k---pG~~R---~dl~~~N~~i----~~~i~~~i~~~~p~a~iivvsNP  120 (294)
T 1oju_A           66 LLKGSEIIVVTAGLARK---PGMTR---LDLAHKNAGI----IKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             GGTTCSEEEECCCCCCC---SSCCH---HHHHHHHHHH----HHHHHHHHHTTSTTCEEEECSSS
T ss_pred             HhCCCCEEEECCCCCCC---CCCcH---HHHHHHHHHH----HHHHHHHHHhhCCCeEEEEeCCc
Confidence            12368999999997531   12233   2345566443    34444444443 24667776653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.03  E-value=0.00064  Score=56.84  Aligned_cols=44  Identities=25%  Similarity=0.480  Sum_probs=38.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELI  106 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~  106 (249)
                      +++++.++|.|+ ||.|++++..|.+.|+ +|.++.|+.+++++.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            467899999998 5999999999999999 8999999988766553

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.02  E-value=0.0013  Score=56.98  Aligned_cols=79  Identities=18%  Similarity=0.171  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~  141 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++       +  .. .+  .|..+ .+++.+.+.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-------G--a~-~v--i~~~~~~~~~~~~v~~  260 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-------G--AT-DC--LNPRELDKPVQDVITE  260 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-------T--CS-EE--ECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-------C--Cc-EE--EccccccchHHHHHHH
Confidence            5789999996 8999999988888999 8999999988765432 21       1  11 11  34443 1223333444


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +.+|++|.++|.
T Consensus       261 ~~~--~g~Dvvid~~G~  275 (376)
T 1e3i_A          261 LTA--GGVDYSLDCAGT  275 (376)
T ss_dssp             HHT--SCBSEEEESSCC
T ss_pred             HhC--CCccEEEECCCC
Confidence            333  479999999985

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.00  E-value=0.012  Score=49.88  Aligned_cols=120  Identities=17%  Similarity=0.121  Sum_probs=72.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC--hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN--LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++.+.+.|+|+ |.+|..+|..|+..|. +|+++|++  +++++....++....+-.....++... .|   .+      
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~~------   74 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---YA------   74 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---HH------
Confidence            34578999997 9999999999999999 99999999  566665555554432100001122221 12   11      


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                           .+.+-|++|.++|.....   ..+.   ...++.|..-.-.+.+.+..+   ...+.++++|-
T Consensus        75 -----a~~~aDvVIiaag~p~kp---g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsN  128 (315)
T 3tl2_A           75 -----DTADSDVVVITAGIARKP---GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTN  128 (315)
T ss_dssp             -----GGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             -----HhCCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCC
Confidence                 234789999999975321   2232   345566655444444444333   22356777664

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.00  E-value=0.0009  Score=54.02  Aligned_cols=72  Identities=15%  Similarity=0.095  Sum_probs=52.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .++++|.|+ |.+|..+++.|.+.|+ |++++++++..+...    .         .+.++.+|.++.+.++++      
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~---------~~~~i~gd~~~~~~l~~a------   67 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR----S---------GANFVHGDPTRVSDLEKA------   67 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----T---------TCEEEESCTTCHHHHHHT------
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----c---------CCeEEEcCCCCHHHHHhc------
Confidence            367899997 8999999999999999 999999987654432    1         356777888888765443      


Q ss_pred             cCCCccEEEeccc
Q 025705          145 RLGPLHVLINNAG  157 (249)
Q Consensus       145 ~~g~id~linnag  157 (249)
                      ...+.|.+|.+.+
T Consensus        68 ~i~~ad~vi~~~~   80 (234)
T 2aef_A           68 NVRGARAVIVDLE   80 (234)
T ss_dssp             TCTTCSEEEECCS
T ss_pred             CcchhcEEEEcCC
Confidence            1224666666554

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.98  E-value=0.0031  Score=53.93  Aligned_cols=64  Identities=11%  Similarity=0.222  Sum_probs=47.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPL  120 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~  120 (249)
                      ..+++++|+|.|++ |+|.++++.|+..|. ++.++|++.                   .+.+..++.+.+..+.    .
T Consensus        30 ~kL~~~~VlIvGaG-GlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~----v  104 (340)
T 3rui_A           30 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL----M  104 (340)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT----C
T ss_pred             HHHhCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC----C
Confidence            45678999999885 999999999999998 788888743                   4666666666665432    4


Q ss_pred             ceEEEEccC
Q 025705          121 NIEAMELDL  129 (249)
Q Consensus       121 ~v~~~~~D~  129 (249)
                      ++..+..++
T Consensus       105 ~v~~~~~~i  113 (340)
T 3rui_A          105 DATGVKLSI  113 (340)
T ss_dssp             EEEEECCCC
T ss_pred             EEEEEeccc
Confidence            566665544

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.97  E-value=0.048  Score=46.42  Aligned_cols=119  Identities=10%  Similarity=-0.085  Sum_probs=72.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..+.+.|+|+ |.+|..+|..++..|.  +|+++|+++++++....++.....-. ...++. ...|..+          
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~-~~~~i~-~t~d~~~----------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFL-HTAKIV-SGKDYSV----------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGS-CCSEEE-EESSSCS----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcc-cCCeEE-EcCCHHH----------
Confidence            4578999999 9999999999999997  89999999998888777776642111 111222 1233321          


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                          +.+-|++|..||.....   ..+.+   ..+..|..-.-.+.+.+..+   ...+.++++|--
T Consensus        87 ----~~daDiVIitaG~p~kp---G~tR~---dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNP  140 (330)
T 3ldh_A           87 ----SAGSKLVVITAGARQQE---GESRL---NLVQRNVNIFKFIIPNIVKH---SPDCLKELHPEL  140 (330)
T ss_dssp             ----CSSCSEEEECCSCCCCS---SCCTT---GGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             ----hCCCCEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCc
Confidence                23689999999985321   12221   23444443333333433333   223567776653

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.95  E-value=0.0014  Score=56.65  Aligned_cols=79  Identities=19%  Similarity=0.220  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~  141 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++       +  .. .+  .|..+ .+++.+.+.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-------G--a~-~v--i~~~~~~~~~~~~i~~  256 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-------G--AT-EC--LNPKDYDKPIYEVICE  256 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-------T--CS-EE--ECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-------C--Cc-EE--EecccccchHHHHHHH
Confidence            5789999995 8999999888888899 8999999988765432 21       1  11 12  34432 1223333444


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +++|++|.++|.
T Consensus       257 ~t~--gg~Dvvid~~g~  271 (373)
T 1p0f_A          257 KTN--GGVDYAVECAGR  271 (373)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             HhC--CCCCEEEECCCC
Confidence            332  479999999885

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.94  E-value=0.0011  Score=56.15  Aligned_cols=74  Identities=11%  Similarity=0.252  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|++|+|+||+|++|...+..+...|++|+.++++ ++. +.++++.         .. .+  .|..+.+.+.+      
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~~~~lG---------a~-~~--i~~~~~~~~~~------  211 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AFLKALG---------AE-QC--INYHEEDFLLA------  211 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HHHHHHT---------CS-EE--EETTTSCHHHH------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HHHHHcC---------CC-EE--EeCCCcchhhh------
Confidence            57899999999999999999999999999988754 332 2222221         11 12  34444432211      


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                       ...++|++|+++|.
T Consensus       212 -~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          212 -ISTPVDAVIDLVGG  225 (321)
T ss_dssp             -CCSCEEEEEESSCH
T ss_pred             -hccCCCEEEECCCc
Confidence             12479999999884

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.94  E-value=0.0031  Score=55.20  Aligned_cols=43  Identities=19%  Similarity=0.132  Sum_probs=38.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .+.+.+|+|.|+ |.+|..+++.+...|++|+++++++++++..
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  229 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV  229 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            357789999999 6999999999999999999999998876554

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.93  E-value=0.0016  Score=56.09  Aligned_cols=76  Identities=12%  Similarity=0.120  Sum_probs=50.9

Q ss_pred             CCCCEEEEeCCCCchHHHH-HHHH-HHcCCE-EEEEEcChH---HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREI-ARQL-AESGAH-VVMAVRNLK---AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~i-a~~l-~~~G~~-Vil~~r~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      +.+++|+|+|+ |++|... +..+ ...|++ |+.++++++   +++.. +++           ....+  |..+.+ +.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l-----------Ga~~v--~~~~~~-~~  234 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL-----------DATYV--DSRQTP-VE  234 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT-----------TCEEE--ETTTSC-GG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc-----------CCccc--CCCccC-HH
Confidence            44589999999 9999998 7666 567997 999999876   65433 221           11222  554432 22


Q ss_pred             HHHHHHhccCCCccEEEecccc
Q 025705          137 RFSEAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~  158 (249)
                      + +.++ .  +++|++|.++|.
T Consensus       235 ~-i~~~-~--gg~Dvvid~~g~  252 (357)
T 2b5w_A          235 D-VPDV-Y--EQMDFIYEATGF  252 (357)
T ss_dssp             G-HHHH-S--CCEEEEEECSCC
T ss_pred             H-HHHh-C--CCCCEEEECCCC
Confidence            3 4444 2  379999999884

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.93  E-value=0.01  Score=50.41  Aligned_cols=119  Identities=14%  Similarity=0.126  Sum_probs=70.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+.+.|+|+ |.+|.++|..|+..|. +|+++|+++++++....++.+.....+...++.. ..|   .+         
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~-t~d---~~---------   69 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG-TND---YK---------   69 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESC---GG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE-cCC---HH---------
Confidence            3467888895 9999999999999988 9999999998887766666653211011122221 112   11         


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                        .+.+-|++|+.+|.....   ..+.   ...+..|..-.-.+.+.+..+-   ..+.+++++-
T Consensus        70 --a~~~aDvVIi~ag~p~k~---G~~R---~dl~~~N~~i~~~i~~~i~~~~---p~a~vivvtN  123 (321)
T 3p7m_A           70 --DLENSDVVIVTAGVPRKP---GMSR---DDLLGINIKVMQTVGEGIKHNC---PNAFVICITN  123 (321)
T ss_dssp             --GGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHC---TTCEEEECCS
T ss_pred             --HHCCCCEEEEcCCcCCCC---CCCH---HHHHHHhHHHHHHHHHHHHHHC---CCcEEEEecC
Confidence              123689999999975321   1232   2345555544444444443332   2356666654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.92  E-value=0.0017  Score=56.83  Aligned_cols=80  Identities=18%  Similarity=0.210  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|.|+ |++|...+..+...|+ +|+.+++++++++..    ++      .+.  ..  .|..+.+.+.+.+.++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~------lGa--~~--i~~~~~~~~~~~~~~~  249 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SD------AGF--ET--IDLRNSAPLRDQIDQI  249 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HT------TTC--EE--EETTSSSCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HH------cCC--cE--EcCCCcchHHHHHHHH
Confidence            5789999996 9999998888888899 899999998776433    11      112  22  3554433212222222


Q ss_pred             hccCCCccEEEeccccC
Q 025705          143 NGRLGPLHVLINNAGIF  159 (249)
Q Consensus       143 ~~~~g~id~linnag~~  159 (249)
                      ... .++|++|.++|..
T Consensus       250 ~~g-~g~Dvvid~~g~~  265 (398)
T 2dph_A          250 LGK-PEVDCGVDAVGFE  265 (398)
T ss_dssp             HSS-SCEEEEEECSCTT
T ss_pred             hCC-CCCCEEEECCCCc
Confidence            221 2599999999853

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.0021  Score=56.13  Aligned_cols=80  Identities=19%  Similarity=0.115  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|.|+ |++|...+..+...|+ +|+.+++++++++... ++         +.  ..  .|.++.+.+.+.+.++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l---------Ga--~~--i~~~~~~~~~~~v~~~  249 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ---------GF--EI--ADLSLDTPLHEQIAAL  249 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---------TC--EE--EETTSSSCHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc---------CC--cE--EccCCcchHHHHHHHH
Confidence            5789999995 9999998888888899 7899999987765442 21         12  22  3554433233323332


Q ss_pred             hccCCCccEEEeccccC
Q 025705          143 NGRLGPLHVLINNAGIF  159 (249)
Q Consensus       143 ~~~~g~id~linnag~~  159 (249)
                      ... .++|++|.++|..
T Consensus       250 t~g-~g~Dvvid~~G~~  265 (398)
T 1kol_A          250 LGE-PEVDCAVDAVGFE  265 (398)
T ss_dssp             HSS-SCEEEEEECCCTT
T ss_pred             hCC-CCCCEEEECCCCc
Confidence            221 2699999999853

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.89  E-value=0.0055  Score=50.30  Aligned_cols=42  Identities=24%  Similarity=0.465  Sum_probs=36.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANEL  105 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~  105 (249)
                      .+++ +++|.|+ ||.|++++..|++.|+ +|.+++|+.+++++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            3567 8999997 8999999999999999 899999998765544

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.89  E-value=0.0013  Score=56.36  Aligned_cols=42  Identities=21%  Similarity=0.271  Sum_probs=36.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ..|++|+|+|+ |++|...+..+...|++|+.+++++++.+..
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            35789999997 8999999988888999999999998876543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.88  E-value=0.018  Score=47.85  Aligned_cols=43  Identities=26%  Similarity=0.229  Sum_probs=36.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~  109 (249)
                      +++.|.|+ |.+|..+|..|++.|++|++++|+++.++...+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            56777775 78999999999999999999999998887776653

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.85  E-value=0.003  Score=54.60  Aligned_cols=78  Identities=10%  Similarity=0.121  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++.. +++.         .. .+  .|..+.+..++ +.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lG---------a~-~v--i~~~~~~~~~~-~~~~  254 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLG---------AT-HV--INSKTQDPVAA-IKEI  254 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHT---------CS-EE--EETTTSCHHHH-HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcC---------CC-EE--ecCCccCHHHH-HHHh
Confidence            5789999995 8999999888888899 699999998776543 2221         11 12  24444332222 2222


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  +++|++|+++|.
T Consensus       255 ~~--gg~D~vid~~g~  268 (371)
T 1f8f_A          255 TD--GGVNFALESTGS  268 (371)
T ss_dssp             TT--SCEEEEEECSCC
T ss_pred             cC--CCCcEEEECCCC
Confidence            22  369999999984

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.83  E-value=0.0025  Score=50.45  Aligned_cols=42  Identities=24%  Similarity=0.382  Sum_probs=36.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~  108 (249)
                      +++|+||+|.+|.++++.|++.|++|.+++|++++.++..++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            478999999999999999999999999999998877665544

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.83  E-value=0.0018  Score=55.59  Aligned_cols=79  Identities=13%  Similarity=0.066  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|.+|+|+|+ |++|...+..+...|+ +|+.+++++++++.. +++.         .. .  ..|..+.+..+++.+..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lG---------a~-~--vi~~~~~~~~~~v~~~t  231 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYG---------AT-D--IINYKNGDIVEQILKAT  231 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHT---------CC-E--EECGGGSCHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhC---------Cc-e--EEcCCCcCHHHHHHHHc
Confidence            4788999985 8999999888888899 799999988765433 2221         11 1  23444443333332222


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                       .. .++|++|.++|.
T Consensus       232 -~g-~g~D~v~d~~g~  245 (352)
T 3fpc_A          232 -DG-KGVDKVVIAGGD  245 (352)
T ss_dssp             -TT-CCEEEEEECSSC
T ss_pred             -CC-CCCCEEEECCCC
Confidence             11 259999999885

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.81  E-value=0.031  Score=47.33  Aligned_cols=118  Identities=8%  Similarity=0.020  Sum_probs=70.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ....+.|+|+ |.+|..++..|+.+|.  .|+++|+++++++....++....+-.+  ..+.+.. |  +.+        
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~--~~~~v~~-~--~~~--------   70 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSP--TTVRVKA-G--EYS--------   70 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSS--SCCEEEE-C--CGG--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcC--CCeEEEe-C--CHH--------
Confidence            3457899999 9999999999999884  899999998888766666555321111  1223322 2  211        


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                         .+.+-|++|..+|.....   ..+.+   ..+..|.--...+++.+.++   ...+.|+++|-
T Consensus        71 ---a~~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN  124 (317)
T 3d0o_A           71 ---DCHDADLVVICAGAAQKP---GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATN  124 (317)
T ss_dssp             ---GGTTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSS
T ss_pred             ---HhCCCCEEEECCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence               123689999999975321   12222   33455544444444444333   12356666544

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.81  E-value=0.0046  Score=56.73  Aligned_cols=64  Identities=11%  Similarity=0.222  Sum_probs=48.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPL  120 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~  120 (249)
                      ..+++.+|+|.|++ |+|.++|+.|++.|. ++.++|.+.                   .+.+..++.+.+..+.    .
T Consensus       322 ekL~~arVLIVGaG-GLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~----V  396 (615)
T 4gsl_A          322 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL----M  396 (615)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTT----C
T ss_pred             HHHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCC----c
Confidence            46788999999985 999999999999998 899998753                   4667777777665432    4


Q ss_pred             ceEEEEccC
Q 025705          121 NIEAMELDL  129 (249)
Q Consensus       121 ~v~~~~~D~  129 (249)
                      ++..+..++
T Consensus       397 ~v~~~~~~I  405 (615)
T 4gsl_A          397 DATGVKLSI  405 (615)
T ss_dssp             EEEEECCCC
T ss_pred             EEEEeeccc
Confidence            666666554

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.79  E-value=0.0026  Score=55.43  Aligned_cols=43  Identities=16%  Similarity=0.136  Sum_probs=38.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .+.+++|+|+|+ |++|+.+++.+...|++|+++++++++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            568999999996 7999999999999999999999998776544

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.78  E-value=0.0025  Score=54.80  Aligned_cols=37  Identities=24%  Similarity=0.347  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      .|++|+|+||+|++|...+..+...|++++++.++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5789999999999999988888788999888776543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.77  E-value=0.024  Score=48.28  Aligned_cols=80  Identities=16%  Similarity=0.044  Sum_probs=53.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ..+.|.|| |.+|.++|..|+..|. +|+++|+++++++....++.+.........++...    +|.+   +.   +  
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea---~--   76 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AA---L--   76 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HH---H--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HH---h--
Confidence            46899998 9999999999999998 99999999988877555554432111111223221    2222   11   1  


Q ss_pred             cCCCccEEEeccccCC
Q 025705          145 RLGPLHVLINNAGIFS  160 (249)
Q Consensus       145 ~~g~id~linnag~~~  160 (249)
                        .+-|++|..+|...
T Consensus        77 --~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 --TGADCVIVTAGLTK   90 (331)
T ss_dssp             --TTCSEEEECCSCSS
T ss_pred             --CCCCEEEEccCCCC
Confidence              26799999999753

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.72  E-value=0.0053  Score=54.06  Aligned_cols=59  Identities=19%  Similarity=0.249  Sum_probs=44.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .+++|.|. |-+|..+++.|.+.|.+|++++++++..+...+.            .+.++.+|.++.+.+++
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~------------g~~vi~GDat~~~~L~~   63 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF------------GMKVFYGDATRMDLLES   63 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT------------TCCCEESCTTCHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC------------CCeEEEcCCCCHHHHHh
Confidence            56899996 7899999999999999999999998876554321            23445566666665443

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.70  E-value=0.0071  Score=52.12  Aligned_cols=63  Identities=16%  Similarity=0.376  Sum_probs=44.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCCce
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPLNI  122 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~v  122 (249)
                      +++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+...+.+.+..+.    .++
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~----v~v  190 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE----ISV  190 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT----SEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC----CeE
Confidence            45688999998 7999999999999998 899998752                   3566666666664332    344


Q ss_pred             EEEEccCC
Q 025705          123 EAMELDLL  130 (249)
Q Consensus       123 ~~~~~D~~  130 (249)
                      ..+..+++
T Consensus       191 ~~~~~~i~  198 (353)
T 3h5n_A          191 SEIALNIN  198 (353)
T ss_dssp             EEEECCCC
T ss_pred             EEeecccC
Confidence            44444443

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.68  E-value=0.016  Score=49.12  Aligned_cols=117  Identities=17%  Similarity=0.140  Sum_probs=68.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|+|+ |.+|.++|..|+..|.  +|+++|+++++++..+.++.+......  ..+.+...|  +.+           
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~--~~~~v~~~~--~~~-----------   65 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHG--FDTRVTGTN--DYG-----------   65 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHT--CCCEEEEES--SSG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccC--CCcEEEECC--CHH-----------
Confidence            4788996 9999999999999987  899999999888776666665321100  112222112  111           


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                      .+.+-|++|.++|.... +  ..+   -...++.|..-.-.+.+.+..+   ...+.|+++|--
T Consensus        66 a~~~aDvVii~ag~~~k-p--G~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNP  120 (314)
T 3nep_X           66 PTEDSDVCIITAGLPRS-P--GMS---RDDLLAKNTEIVGGVTEQFVEG---SPDSTIIVVANP  120 (314)
T ss_dssp             GGTTCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHHHTT---CTTCEEEECCSS
T ss_pred             HhCCCCEEEECCCCCCC-C--CCC---HHHHHHhhHHHHHHHHHHHHHh---CCCcEEEecCCc
Confidence            23468999999997531 1  112   2234555654444444443332   124667776653

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.60  E-value=0.0049  Score=53.33  Aligned_cols=48  Identities=19%  Similarity=0.328  Sum_probs=41.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~  109 (249)
                      .+++||+++|.|. |.+|..+|+.|.+.|++|++.+++++++++..++.
T Consensus       169 ~~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          169 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             cCCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            3689999999997 78999999999999999999999988877666553

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.58  E-value=0.016  Score=49.34  Aligned_cols=78  Identities=17%  Similarity=0.137  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|++++|.|+ |++|...+..+... |++|+.+++++++++... ++       +  .. .++  |..+ +..+++.+..
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~l-------G--a~-~~i--~~~~-~~~~~v~~~t  235 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EV-------G--AD-AAV--KSGA-GAADAIRELT  235 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HT-------T--CS-EEE--ECST-THHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc-------C--CC-EEE--cCCC-cHHHHHHHHh
Confidence            4789999998 99999888777666 789999999987765432 21       1  11 122  3222 2233332222


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  .++|++|.++|.
T Consensus       236 ~g--~g~d~v~d~~G~  249 (345)
T 3jv7_A          236 GG--QGATAVFDFVGA  249 (345)
T ss_dssp             GG--GCEEEEEESSCC
T ss_pred             CC--CCCeEEEECCCC
Confidence            11  269999999885

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.56  E-value=0.042  Score=46.04  Aligned_cols=113  Identities=12%  Similarity=0.041  Sum_probs=70.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEE-ccCCCHHHHHHHHHHHhc
Q 025705           68 CIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME-LDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~v~~~~~~~~~  144 (249)
                      |.|+|+ |+||..+|..|+.++.  +++++|.++++++..+.++..-.....  ....... .|..+             
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~--~~~~i~~~~d~~~-------------   66 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGID--KYPKIVGGADYSL-------------   66 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGT--CCCEEEEESCGGG-------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCC--CCCeEecCCCHHH-------------
Confidence            678895 9999999999998875  799999999888877777776432111  1222222 23321             


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                       ..+-|++|..||....   ..++.+   ..++.|..=    .+.+.+.+.+.. .+.|+.+|-
T Consensus        67 -~~~aDvVvitAG~prk---pGmtR~---dLl~~Na~I----~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           67 -LKGSEIIVVTAGLARK---PGMTRL---DLAHKNAGI----IKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             -GTTCSEEEECCCCCCC---SSSCHH---HHHHHHHHH----HHHHHHHHHTTSTTCEEEECSS
T ss_pred             -hCCCCEEEEecCCCCC---CCCchH---HHHHHHHHH----HHHHHHHHHhcCCceEEEEecC
Confidence             2368999999997531   123433   446666553    344444444433 345555554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.55  E-value=0.02  Score=48.24  Aligned_cols=79  Identities=13%  Similarity=0.095  Sum_probs=52.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ..+.|+|+ |.+|..++..|+..|. +|+++|+++++++....++.+.........++... .|.   +.          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~---~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY---AD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG---GG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH---HH----------
Confidence            46899999 9999999999999997 99999999888876655555421100111222221 221   11          


Q ss_pred             cCCCccEEEeccccCC
Q 025705          145 RLGPLHVLINNAGIFS  160 (249)
Q Consensus       145 ~~g~id~linnag~~~  160 (249)
                       +.+.|++|.++|...
T Consensus        68 -~~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           68 -TANSDVIVVTSGAPR   82 (309)
T ss_dssp             -GTTCSEEEECCCC--
T ss_pred             -HCCCCEEEEcCCCCC
Confidence             236899999999753

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.54  E-value=0.043  Score=46.65  Aligned_cols=118  Identities=8%  Similarity=0.005  Sum_probs=72.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +...+.|+|+ |.+|..++..|+..+.  .|+++|+++++++....++.+..+- .  ..+.+.. |  +.+.       
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~-~--~~~~i~~-~--~~~a-------   73 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPF-T--SPKKIYS-A--EYSD-------   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGG-S--CCCEEEE-C--CGGG-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHh-c--CCeEEEE-C--CHHH-------
Confidence            4467999999 9999999999999886  8999999998888777777663211 1  1233322 2  2111       


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                          +.+-|++|..+|.....   ..+.+   ..+..|.--...+.+.+..+   ...+.|+++|--
T Consensus        74 ----~~~aDvVii~ag~~~k~---g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNP  127 (326)
T 2zqz_A           74 ----AKDADLVVITAGAPQKP---GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANP  127 (326)
T ss_dssp             ----GGGCSEEEECCCCC--------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSS
T ss_pred             ----hCCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCc
Confidence                23689999999975311   12222   33455554444444444333   234677776543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.36  E-value=0.0096  Score=54.54  Aligned_cols=64  Identities=11%  Similarity=0.218  Sum_probs=48.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC-------------------hHHHHHHHHHHHHhhcCCCCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN-------------------LKAANELIQKWQEEWSGKGLPL  120 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~  120 (249)
                      ..+++++|+|.|++ |+|.++|+.|++.|. ++.++|.+                   ..+.+..++.+++..+.    .
T Consensus       323 ~kL~~~kVLIVGaG-GLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~----v  397 (598)
T 3vh1_A          323 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL----M  397 (598)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTT----C
T ss_pred             HHHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCC----c
Confidence            45678899999875 999999999999998 78898654                   24777777777765332    4


Q ss_pred             ceEEEEccC
Q 025705          121 NIEAMELDL  129 (249)
Q Consensus       121 ~v~~~~~D~  129 (249)
                      ++..+..++
T Consensus       398 ~v~~~~~~I  406 (598)
T 3vh1_A          398 DATGVKLSI  406 (598)
T ss_dssp             EEEEECCCC
T ss_pred             EEEEEeccc
Confidence            666666554

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.36  E-value=0.0058  Score=51.46  Aligned_cols=41  Identities=10%  Similarity=0.144  Sum_probs=34.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ..|++|+|+|+ |++|...+..+...|++|+.++ ++++.+..
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~  181 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA  181 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence            35899999999 9999999988888999999999 76665443

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.35  E-value=0.0092  Score=50.86  Aligned_cols=79  Identities=16%  Similarity=0.096  Sum_probs=47.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|.+++|.|+ +++|...+..+... |++|+.+++++++++... ++    .     .. .  ..|.++.+..+++.+..
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~----G-----a~-~--~i~~~~~~~~~~v~~~t  228 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KI----G-----AD-V--TINSGDVNPVDEIKKIT  228 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HT----T-----CS-E--EEEC-CCCHHHHHHHHT
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hc----C-----Ce-E--EEeCCCCCHHHHhhhhc
Confidence            5789999987 67777777777665 779999999987754332 11    1     11 1  23555544444433322


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                       .. ..+|.++.++|.
T Consensus       229 -~g-~g~d~~~~~~~~  242 (348)
T 4eez_A          229 -GG-LGVQSAIVCAVA  242 (348)
T ss_dssp             -TS-SCEEEEEECCSC
T ss_pred             -CC-CCceEEEEeccC
Confidence             11 247778877663

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.30  E-value=0.013  Score=50.18  Aligned_cols=106  Identities=10%  Similarity=0.077  Sum_probs=62.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcChH--HHHHHHHHHHHhhcCCCCCCceEEEEccCCCH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNLK--AANELIQKWQEEWSGKGLPLNIEAMELDLLSL  132 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  132 (249)
                      .+..-.|.|+||+|+||..++..|+....       ++.++|.++.  .++...-++..-.    .......+..+  +.
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~----~~~~~~~~~~~--~~   94 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA----FPLLDKVVVTA--DP   94 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT----CTTEEEEEEES--CH
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC----ccCCCcEEEcC--Ch
Confidence            44556899999999999999999998643       6999998763  3455555555421    11122222211  21


Q ss_pred             HHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 025705          133 DSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSIL  189 (249)
Q Consensus       133 ~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~  189 (249)
                      .   +       .+.+-|++|..||....   ..++.   +..++.|..=.-.+.+.
T Consensus        95 ~---~-------a~~~advVvi~aG~prk---pGmtR---~DLl~~Na~I~~~~~~~  135 (345)
T 4h7p_A           95 R---V-------AFDGVAIAIMCGAFPRK---AGMER---KDLLEMNARIFKEQGEA  135 (345)
T ss_dssp             H---H-------HTTTCSEEEECCCCCCC---TTCCH---HHHHHHHHHHHHHHHHH
T ss_pred             H---H-------HhCCCCEEEECCCCCCC---CCCCH---HHHHHHhHHHHHHHHHH
Confidence            1   1       13478999999998532   12343   34566665433333333

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.22  E-value=0.0039  Score=52.86  Aligned_cols=39  Identities=36%  Similarity=0.499  Sum_probs=34.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +|+|+||+|++|...+..+...|++|+.+++++++++..
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999888999999999987766543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.22  E-value=0.055  Score=45.79  Aligned_cols=76  Identities=11%  Similarity=0.096  Sum_probs=54.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ..+.|+|+ |.+|..++..|+..+.  .|+++|+++++++..+.++.+..+- .  ..+.+.. |  +.+          
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~-~--~~~~v~~-~--~~~----------   68 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAF-T--APKKIYS-G--EYS----------   68 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGG-S--CCCEEEE-C--CGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHh-c--CCeEEEE-C--CHH----------
Confidence            47999999 9999999999999886  8999999998888777777664311 1  1233322 2  211          


Q ss_pred             ccCCCccEEEeccccC
Q 025705          144 GRLGPLHVLINNAGIF  159 (249)
Q Consensus       144 ~~~g~id~linnag~~  159 (249)
                       .+.+-|++|..+|..
T Consensus        69 -a~~~aDvVii~ag~~   83 (318)
T 1ez4_A           69 -DCKDADLVVITAGAP   83 (318)
T ss_dssp             -GGTTCSEEEECCCC-
T ss_pred             -HhCCCCEEEECCCCC
Confidence             134789999999975

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.22  E-value=0.0099  Score=53.09  Aligned_cols=73  Identities=14%  Similarity=0.215  Sum_probs=56.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++|.|+ |-+|..+|+.|.++|++|++++++++.++...++           ..+.++.+|.++++.++++=      .
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~-----------~~~~~i~Gd~~~~~~L~~Ag------i   66 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDK-----------YDLRVVNGHASHPDVLHEAG------A   66 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH-----------SSCEEEESCTTCHHHHHHHT------T
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh-----------cCcEEEEEcCCCHHHHHhcC------C
Confidence            4777777 5899999999999999999999998877665433           25678889999998876641      1


Q ss_pred             CCccEEEeccc
Q 025705          147 GPLHVLINNAG  157 (249)
Q Consensus       147 g~id~linnag  157 (249)
                      .+-|.+|-..+
T Consensus        67 ~~ad~~ia~t~   77 (461)
T 4g65_A           67 QDADMLVAVTN   77 (461)
T ss_dssp             TTCSEEEECCS
T ss_pred             CcCCEEEEEcC
Confidence            25688776544

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.19  E-value=0.056  Score=45.83  Aligned_cols=79  Identities=16%  Similarity=0.087  Sum_probs=54.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ..+.|+|| |.+|..++..|+..|. +|+++|+++++++.....+...........++... .|.   +           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY---D-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH---H-----------
Confidence            46889998 9999999999999998 99999999988876666655432111111223221 222   1           


Q ss_pred             cCCCccEEEeccccCC
Q 025705          145 RLGPLHVLINNAGIFS  160 (249)
Q Consensus       145 ~~g~id~linnag~~~  160 (249)
                      .+.+-|++|.++|...
T Consensus        69 al~~aD~Vi~a~g~p~   84 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTK   84 (322)
T ss_dssp             GGTTCSEEEECCSCSS
T ss_pred             HhCCCCEEEEeCCCCC
Confidence            1236899999999753

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.18  E-value=0.14  Score=43.10  Aligned_cols=78  Identities=14%  Similarity=0.107  Sum_probs=54.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +.+.|+|+ |.+|..++..++..|.  +|+++|+++++++....++.+.....+  ..+.+.. |  +.+          
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~--~~~~i~~-~--~~~----------   70 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAP--KPVDIWH-G--DYD----------   70 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSS--SCCEEEE-C--CGG----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcC--CCeEEEc-C--cHH----------
Confidence            57999999 9999999999998885  899999998877766666655322111  1233332 1  211          


Q ss_pred             ccCCCccEEEeccccCC
Q 025705          144 GRLGPLHVLINNAGIFS  160 (249)
Q Consensus       144 ~~~g~id~linnag~~~  160 (249)
                       .+.+-|++|.++|...
T Consensus        71 -al~~aDvViia~~~~~   86 (316)
T 1ldn_A           71 -DCRDADLVVICAGANQ   86 (316)
T ss_dssp             -GTTTCSEEEECCSCCC
T ss_pred             -HhCCCCEEEEcCCCCC
Confidence             1346899999999854

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.18  E-value=0.013  Score=49.21  Aligned_cols=43  Identities=26%  Similarity=0.292  Sum_probs=38.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE  104 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~  104 (249)
                      .++.|++++|.|+ |+||+++|+.+...|++|++++|+.++.+.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            4688999999996 899999999999999999999999865543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.18  E-value=0.064  Score=45.56  Aligned_cols=79  Identities=20%  Similarity=0.122  Sum_probs=53.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +.+.|.|| |.+|..+|..|+..|. +|+++|++++.++....++.+.........++... .|.   +.          
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~a----------   79 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY---EY----------   79 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---GG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH---HH----------
Confidence            57899998 9999999999999998 99999999988876544444322110011223321 222   11          


Q ss_pred             cCCCccEEEeccccCC
Q 025705          145 RLGPLHVLINNAGIFS  160 (249)
Q Consensus       145 ~~g~id~linnag~~~  160 (249)
                       +.+-|++|.++|...
T Consensus        80 -l~~aD~VI~avg~p~   94 (328)
T 2hjr_A           80 -LQNSDVVIITAGVPR   94 (328)
T ss_dssp             -GTTCSEEEECCSCCC
T ss_pred             -HCCCCEEEEcCCCCC
Confidence             236899999999753

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.13  E-value=0.038  Score=46.95  Aligned_cols=80  Identities=13%  Similarity=0.178  Sum_probs=50.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..|++|+|.|+ ||+|...+..+...|+. ++.+++++++++.. +++    .     .. ..  .|.++.+ ..+..++
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~l----G-----a~-~~--i~~~~~~-~~~~~~~  223 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSF----G-----AM-QT--FNSSEMS-APQMQSV  223 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT----T-----CS-EE--EETTTSC-HHHHHHH
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHc----C-----Ce-EE--EeCCCCC-HHHHHHh
Confidence            35789999987 89999999888889986 46778887765433 221    1     11 22  2444332 2233344


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +.+ ....|+++.++|.
T Consensus       224 ~~~-~~g~d~v~d~~G~  239 (346)
T 4a2c_A          224 LRE-LRFNQLILETAGV  239 (346)
T ss_dssp             HGG-GCSSEEEEECSCS
T ss_pred             hcc-cCCcccccccccc
Confidence            433 2468999998874

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.13  E-value=0.0062  Score=50.67  Aligned_cols=39  Identities=21%  Similarity=0.342  Sum_probs=35.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      .++.||+++|.|+++-+|+.+|..|++.|+.|.++.++.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999999999999999999999999987653

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.12  E-value=0.008  Score=50.72  Aligned_cols=40  Identities=23%  Similarity=0.309  Sum_probs=35.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      |+ |+|+||+|++|...+..+...|++|+.+++++++.+..
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            45 99999999999999999989999999999998876544

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.12  E-value=0.0048  Score=51.18  Aligned_cols=43  Identities=28%  Similarity=0.414  Sum_probs=37.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ++++++++|.|+ |++|+++++.|.+.|++|.+++|+.++.++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            467889999996 6999999999999999999999998766544

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.12  E-value=0.0062  Score=51.84  Aligned_cols=72  Identities=14%  Similarity=0.109  Sum_probs=52.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .++++|.|+ |.+|..++++|.++|. |++++++++..+ ..    +        ..+.++.+|.+|++.++++      
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~--------~~~~~i~gd~~~~~~L~~a------  173 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R--------SGANFVHGDPTRVSDLEKA------  173 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H--------TTCEEEESCTTSHHHHHHT------
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h--------CCcEEEEeCCCCHHHHHhc------
Confidence            468999996 8999999999999999 999999988765 32    1        1467788899888877653      


Q ss_pred             cCCCccEEEeccc
Q 025705          145 RLGPLHVLINNAG  157 (249)
Q Consensus       145 ~~g~id~linnag  157 (249)
                      ...+.|.+|...+
T Consensus       174 ~i~~a~~vi~~~~  186 (336)
T 1lnq_A          174 NVRGARAVIVDLE  186 (336)
T ss_dssp             CSTTEEEEEECCS
T ss_pred             ChhhccEEEEcCC
Confidence            1124566665543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.10  E-value=0.059  Score=45.22  Aligned_cols=75  Identities=19%  Similarity=0.161  Sum_probs=48.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|+|+ |.+|..++..|+..|.  +|+++|+++++++....++.+...   ....+.+..   ++.+           
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~---~~~~~~i~~---~~~~-----------   63 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP---VSHGTRVWH---GGHS-----------   63 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC---TTSCCEEEE---ECGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh---hcCCeEEEE---CCHH-----------
Confidence            5789998 9999999999999998  999999998877654444433110   001122221   1211           


Q ss_pred             cCCCccEEEeccccC
Q 025705          145 RLGPLHVLINNAGIF  159 (249)
Q Consensus       145 ~~g~id~linnag~~  159 (249)
                      ...+-|++|.++|..
T Consensus        64 a~~~aDvVIi~~~~~   78 (304)
T 2v6b_A           64 ELADAQVVILTAGAN   78 (304)
T ss_dssp             GGTTCSEEEECC---
T ss_pred             HhCCCCEEEEcCCCC
Confidence            123689999999864

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.09  E-value=0.066  Score=45.13  Aligned_cols=40  Identities=23%  Similarity=0.153  Sum_probs=35.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELI  106 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~  106 (249)
                      ..+.|.|+ |.+|..+|..|++.|. +|++++++++.++...
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~   45 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKA   45 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHH
Confidence            56889998 8999999999999998 9999999988776643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.09  E-value=0.13  Score=43.22  Aligned_cols=115  Identities=15%  Similarity=0.075  Sum_probs=70.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|+|+ |.+|..++..|+.++  .+|+++|+++++++..+.++.+...- .  ..+.+.. |  +.+.          
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~-~--~~~~v~~-~--~~~a----------   64 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPF-A--HPVWVWA-G--SYGD----------   64 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGG-S--CCCEEEE-C--CGGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhh-c--CCeEEEE-C--CHHH----------
Confidence            5889998 999999999999987  48999999998888777777653211 0  1223322 2  2221          


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                       +.+-|++|..+|.....   ..+.+   ..+..|.--...+.+.+..+   ...+.|+++|--
T Consensus        65 -~~~aD~Vii~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNP  118 (310)
T 2xxj_A           65 -LEGARAVVLAAGVAQRP---GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNP  118 (310)
T ss_dssp             -GTTEEEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             -hCCCCEEEECCCCCCCC---CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence             24689999999975321   22322   23455544444444444333   234677776543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.05  E-value=0.0023  Score=54.26  Aligned_cols=82  Identities=24%  Similarity=0.188  Sum_probs=54.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceE-EEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE-AMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~v~~~~~  140 (249)
                      ++.|++++|.|++.-+|+.+|+.|++.|++|.+++|+..++.+..+++.         ...+ ...+..++++++.+.+.
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la---------~~~~~~t~~~~t~~~~L~e~l~  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK---------LNKHHVEDLGEYSEDLLKKCSL  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS---------CCCCEEEEEEECCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh---------hhcccccccccccHhHHHHHhc
Confidence            7899999999999889999999999999999999887432211111100         0111 11111134456666555


Q ss_pred             HHhccCCCccEEEeccccC
Q 025705          141 AWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~  159 (249)
                             .-|++|.+.|..
T Consensus       245 -------~ADIVIsAtg~p  256 (320)
T 1edz_A          245 -------DSDVVITGVPSE  256 (320)
T ss_dssp             -------HCSEEEECCCCT
T ss_pred             -------cCCEEEECCCCC
Confidence                   369999998864

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.04  E-value=0.035  Score=47.02  Aligned_cols=115  Identities=10%  Similarity=0.016  Sum_probs=65.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ..+.|+|+ |.+|..++..|+..|.  +|+++|.++++++....++.+..+   ....+.+. .  .+.+          
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~---~~~~~~i~-~--~~~~----------   70 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP---FMGQMSLY-A--GDYS----------   70 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC---CTTCEEEC-----CGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH---hcCCeEEE-E--CCHH----------
Confidence            45888898 9999999999999987  899999998777665555544211   00122221 1  1111          


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                       .+.+-|++|..+|.....   ..+.   ...+..|.--...+++.+.++   ...+.|+++|-
T Consensus        71 -a~~~aDvVii~~g~p~k~---g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN  124 (318)
T 1y6j_A           71 -DVKDCDVIVVTAGANRKP---GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  124 (318)
T ss_dssp             -GGTTCSEEEECCCC---------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             -HhCCCCEEEEcCCCCCCC---CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence             134789999999974311   1122   234566655555555555444   23456666543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.03  E-value=0.012  Score=48.28  Aligned_cols=45  Identities=31%  Similarity=0.467  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~  108 (249)
                      +++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.++..++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            5678 8999997 7899999999999999999999998776665543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.02  E-value=0.017  Score=48.28  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .++.|++++|.|+ |+||+++|+.+...|++|++++|+.++.+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            4688999999995 79999999999999999999999986644

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.01  E-value=0.022  Score=50.62  Aligned_cols=79  Identities=25%  Similarity=0.203  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .++++|.++|.|. |+.|.++|+.|.++|++|.+.|++........+++.+.        .+.+....-  .+.      
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~--------gi~~~~g~~--~~~------   67 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE--------GIKVVCGSH--PLE------   67 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT--------TCEEEESCC--CGG------
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC--------CCEEEECCC--hHH------
Confidence            4567899999999 78999999999999999999998754222333444441        233332221  110      


Q ss_pred             HHhccCCC-ccEEEeccccCC
Q 025705          141 AWNGRLGP-LHVLINNAGIFS  160 (249)
Q Consensus       141 ~~~~~~g~-id~linnag~~~  160 (249)
                          .... .|.+|...|+..
T Consensus        68 ----~~~~~~d~vv~spgi~~   84 (451)
T 3lk7_A           68 ----LLDEDFCYMIKNPGIPY   84 (451)
T ss_dssp             ----GGGSCEEEEEECTTSCT
T ss_pred             ----hhcCCCCEEEECCcCCC
Confidence                0123 899999999853

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.97  E-value=0.07  Score=44.91  Aligned_cols=116  Identities=16%  Similarity=0.078  Sum_probs=67.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAES--GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|.|+ |.+|..+|..|++.  |.+|+++++++++++....++.+.........++... .|   .+.          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d---~~~----------   66 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS-ND---YAD----------   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE-SC---GGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC-CC---HHH----------
Confidence            4788998 99999999999985  7899999999887775543333211000001122211 12   211          


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                       ..+.|++|.+++....   ...+   -...++.|..-.-.+.+.+.++.   ..+.|++++-
T Consensus        67 -l~~aDvViiav~~p~~---~g~~---r~dl~~~n~~i~~~i~~~i~~~~---~~~~viv~tN  119 (310)
T 1guz_A           67 -TANSDIVIITAGLPRK---PGMT---REDLLMKNAGIVKEVTDNIMKHS---KNPIIIVVSN  119 (310)
T ss_dssp             -GTTCSEEEECCSCCCC---TTCC---HHHHHHHHHHHHHHHHHHHHHHC---SSCEEEECCS
T ss_pred             -HCCCCEEEEeCCCCCC---CCCC---HHHHHHHHHHHHHHHHHHHHHhC---CCcEEEEEcC
Confidence             2368999999986421   1111   22445555555555555554442   2356666644

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.97  E-value=0.058  Score=45.52  Aligned_cols=87  Identities=16%  Similarity=0.115  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH-------HHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK-------WQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      ..+++.|.|. |.+|..+|..|++.|++|++++|++++.++..++       ..+...      ...++..=+.+...++
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~------~aDvVi~~vp~~~~~~  102 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAAR------DADIVVSMLENGAVVQ  102 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHT------TCSEEEECCSSHHHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHh------cCCEEEEECCCHHHHH
Confidence            4467888865 7899999999999999999999998877665431       111111      1223333445566666


Q ss_pred             HHHH--HHhccCCCccEEEeccc
Q 025705          137 RFSE--AWNGRLGPLHVLINNAG  157 (249)
Q Consensus       137 ~~~~--~~~~~~g~id~linnag  157 (249)
                      .++.  .+.....+=.++|+...
T Consensus       103 ~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          103 DVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHHcchhHHhhCCCCCEEEecCC
Confidence            6664  44443334456666644

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.96  E-value=0.14  Score=43.27  Aligned_cols=115  Identities=14%  Similarity=0.105  Sum_probs=67.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-C--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           67 TCIVTGSTSGIGREIARQLAES-G--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~-G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|.|+||+|.+|.+++..|+.+ +  .+++++|+++ +.+...-++...    ....++..+. .-.+.+.         
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~----~~~~~v~~~~-~~~~~~~---------   66 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI----PTAVKIKGFS-GEDATPA---------   66 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS----CSSEEEEEEC-SSCCHHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC----CCCceEEEec-CCCcHHH---------
Confidence            4789999999999999999886 5  3799999987 444444455441    1111222221 1112221         


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                        +.+.|++|..||....   ...+   -...++.|..-.-.+.+.+..+-   ..+.|+++|-
T Consensus        67 --~~~aDivii~ag~~rk---pG~~---R~dll~~N~~I~~~i~~~i~~~~---p~a~vlvvtN  119 (312)
T 3hhp_A           67 --LEGADVVLISAGVARK---PGMD---RSDLFNVNAGIVKNLVQQVAKTC---PKACIGIITN  119 (312)
T ss_dssp             --HTTCSEEEECCSCSCC---TTCC---HHHHHHHHHHHHHHHHHHHHHHC---TTSEEEECSS
T ss_pred             --hCCCCEEEEeCCCCCC---CCCC---HHHHHHHHHHHHHHHHHHHHHHC---CCcEEEEecC
Confidence              1368999999997531   1223   23455666555455555544432   2356666654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.94  E-value=0.14  Score=42.69  Aligned_cols=41  Identities=22%  Similarity=0.228  Sum_probs=35.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQ  107 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~  107 (249)
                      +++.|.|+ |.+|..+|..|++.|++|++++|+++.++...+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            56888888 799999999999999999999999888776543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.94  E-value=0.023  Score=46.34  Aligned_cols=77  Identities=18%  Similarity=0.249  Sum_probs=55.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      .+.|.|++|.+|+.+++.+.+. ++.|+.+....+.+++...   .         ... +..|++.++.+.+.++.+.+.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~---------~~D-vvIDfT~p~a~~~~~~~a~~~   68 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---G---------NTE-VVIDFTHPDVVMGNLEFLIDN   68 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---T---------TCC-EEEECSCTTTHHHHHHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---c---------CCc-EEEEccChHHHHHHHHHHHHc
Confidence            4899999999999999999876 8988765443333332211   1         112 456999999998888877664


Q ss_pred             CCCccEEEecccc
Q 025705          146 LGPLHVLINNAGI  158 (249)
Q Consensus       146 ~g~id~linnag~  158 (249)
                        +++++|-..|.
T Consensus        69 --g~~~VigTTG~   79 (245)
T 1p9l_A           69 --GIHAVVGTTGF   79 (245)
T ss_dssp             --TCEEEECCCCC
T ss_pred             --CCCEEEcCCCC
Confidence              68888887764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.88  E-value=0.031  Score=46.77  Aligned_cols=81  Identities=15%  Similarity=0.148  Sum_probs=51.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+++.|.||.|.+|.++|..|.+.|++|++++|+++..   ..+..+   .    .++.++.+-.   ..+.++++++..
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~---~~~~~~---~----aDvVilavp~---~~~~~vl~~l~~   87 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV---AESILA---N----ADVVIVSVPI---NLTLETIERLKP   87 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG---HHHHHT---T----CSEEEECSCG---GGHHHHHHHHGG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC---HHHHhc---C----CCEEEEeCCH---HHHHHHHHHHHh
Confidence            35689999999999999999999999999999986531   111111   1    3455544322   236667777655


Q ss_pred             cCCCccEEEecccc
Q 025705          145 RLGPLHVLINNAGI  158 (249)
Q Consensus       145 ~~g~id~linnag~  158 (249)
                      ...+=.++++.+++
T Consensus        88 ~l~~~~iv~~~~sv  101 (298)
T 2pv7_A           88 YLTENMLLADLTSV  101 (298)
T ss_dssp             GCCTTSEEEECCSC
T ss_pred             hcCCCcEEEECCCC
Confidence            43322355555443

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.88  E-value=0.098  Score=44.00  Aligned_cols=77  Identities=14%  Similarity=0.186  Sum_probs=52.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +.|+|| |.+|..++..++..|. .|+++|+++++++....++.+.........++... .|   .+           .+
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~-----------a~   65 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---YE-----------DM   65 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG-----------GG
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---HH-----------Hh
Confidence            678998 9999999999999888 69999999988877666665532100111223221 22   11           12


Q ss_pred             CCccEEEeccccCC
Q 025705          147 GPLHVLINNAGIFS  160 (249)
Q Consensus       147 g~id~linnag~~~  160 (249)
                      .+-|++|..+|...
T Consensus        66 ~~aD~Vi~~ag~~~   79 (308)
T 2d4a_B           66 RGSDIVLVTAGIGR   79 (308)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             CCCCEEEEeCCCCC
Confidence            37899999999753

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.86  E-value=0.098  Score=46.90  Aligned_cols=44  Identities=27%  Similarity=0.287  Sum_probs=36.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ  110 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~  110 (249)
                      +++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.+.
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~   49 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIH   49 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHH
Confidence            34666666 799999999999999999999999998887766543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.82  E-value=0.015  Score=48.16  Aligned_cols=37  Identities=14%  Similarity=0.199  Sum_probs=34.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +.||+++|.|+++-+|+.+|..|.+.|++|.++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            7899999999999999999999999999999987653

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.79  E-value=0.035  Score=45.95  Aligned_cols=41  Identities=20%  Similarity=0.318  Sum_probs=36.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELI  106 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~  106 (249)
                      .++.|.|++|.+|.++++.|++.|++|++++|++++.+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47999999999999999999999999999999987766543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.79  E-value=0.062  Score=44.48  Aligned_cols=85  Identities=15%  Similarity=0.070  Sum_probs=53.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH-------HHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK-------WQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +++.|.|. |.+|..+|..|++.|++|++++|++++.+...+.       ..+...      +..++..=+.+...++++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~------~aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVE------SCPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHH------HCSEEEECCSSHHHHHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHh------cCCEEEEEcCCHHHHHHH
Confidence            45777775 7999999999999999999999998877655431       111100      122333345556667776


Q ss_pred             H---HHHhccCCCccEEEeccc
Q 025705          139 S---EAWNGRLGPLHVLINNAG  157 (249)
Q Consensus       139 ~---~~~~~~~g~id~linnag  157 (249)
                      +   +++.....+=.++|+..+
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECSC
T ss_pred             HcCcchHhhcCCCCCEEEeCCC
Confidence            6   555443333356666644

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.76  E-value=0.023  Score=50.33  Aligned_cols=62  Identities=18%  Similarity=0.227  Sum_probs=44.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCCceE
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPLNIE  123 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~v~  123 (249)
                      ++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+..++.+.+..+.    .++.
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~----v~v~  113 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN----CNVV  113 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT----CCCE
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC----CEEE
Confidence            5678999997 6899999999999998 788886421                   3566666666664332    3455


Q ss_pred             EEEccCC
Q 025705          124 AMELDLL  130 (249)
Q Consensus       124 ~~~~D~~  130 (249)
                      .+..++.
T Consensus       114 ~~~~~i~  120 (434)
T 1tt5_B          114 PHFNKIQ  120 (434)
T ss_dssp             EEESCGG
T ss_pred             EEecccc
Confidence            5554443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.73  E-value=0.056  Score=44.79  Aligned_cols=84  Identities=13%  Similarity=0.146  Sum_probs=55.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---EEEEEEcChHHHHHHHHHH--------HHhhcCCCCCCceEEEEccCCCHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA---HVVMAVRNLKAANELIQKW--------QEEWSGKGLPLNIEAMELDLLSLDS  134 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~---~Vil~~r~~~~~~~~~~~~--------~~~~~~~~~~~~v~~~~~D~~~~~~  134 (249)
                      +++.|.|+ |-+|.+++..|++.|+   +|++++|+++++++..++.        .+...    ..++.++.+   .++.
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~----~aDvVilav---~p~~   75 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGAL----NADVVVLAV---KPHQ   75 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHS----SCSEEEECS---CGGG
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHh----cCCeEEEEe---CHHH
Confidence            55778877 7999999999999998   8999999998877665431        11111    124444433   3466


Q ss_pred             HHHHHHHHhcc-CCCccEEEeccc
Q 025705          135 VVRFSEAWNGR-LGPLHVLINNAG  157 (249)
Q Consensus       135 v~~~~~~~~~~-~g~id~linnag  157 (249)
                      ++++++++... ..+=.++|++++
T Consensus        76 ~~~vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           76 IKMVCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHHHHhhccCCCeEEEEecC
Confidence            77777777654 332237777654

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=95.69  E-value=0.099  Score=47.62  Aligned_cols=65  Identities=14%  Similarity=0.111  Sum_probs=48.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .....+++|.|.+ -+|..+++.|.+.|.+|++++.+++..++..++           ..+.++.+|.++++.++++
T Consensus       124 ~~~~~hviI~G~g-~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~-----------~~~~~i~Gd~~~~~~L~~a  188 (565)
T 4gx0_A          124 DDTRGHILIFGID-PITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ-----------EGFKVVYGSPTDAHVLAGL  188 (565)
T ss_dssp             TTCCSCEEEESCC-HHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS-----------CSSEEEESCTTCHHHHHHT
T ss_pred             cccCCeEEEECCC-hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh-----------cCCeEEEeCCCCHHHHHhc
Confidence            3445678888875 799999999999999999999998766544321           1456777888887776553

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.69  E-value=0.019  Score=47.60  Aligned_cols=45  Identities=24%  Similarity=0.450  Sum_probs=38.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~  109 (249)
                      .++.++|.|+ ||.|++++..|++.|+ +|.++.|+.+++++.++++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4578999995 6999999999999998 7999999998887776554

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.66  E-value=0.015  Score=48.27  Aligned_cols=39  Identities=23%  Similarity=0.385  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      .++.||+++|.|.++-+|+.+|..|++.|+.|.++.++.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            468899999999999899999999999999999987643

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.66  E-value=0.078  Score=44.51  Aligned_cols=87  Identities=14%  Similarity=0.084  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH-------HHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK-------WQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      .-.++.|.| .|.+|..+|..|++.|++|++++|++++.+...+.       ..+...      ...++..=+.+...++
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~------~aDvvi~~vp~~~~~~   92 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIK------KCKYTIAMLSDPCAAL   92 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHH------HCSEEEECCSSHHHHH
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHH------hCCEEEEEcCCHHHHH
Confidence            335677776 57999999999999999999999998876655421       111000      1223333445556666


Q ss_pred             HHH---HHHhccCCCccEEEeccc
Q 025705          137 RFS---EAWNGRLGPLHVLINNAG  157 (249)
Q Consensus       137 ~~~---~~~~~~~g~id~linnag  157 (249)
                      +++   +.+.....+=.++|+...
T Consensus        93 ~v~~~~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           93 SVVFDKGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             HHHHSTTCGGGGCCTTCEEEECSC
T ss_pred             HHHhCchhhhhccCCCCEEEECCC
Confidence            666   444443333356666554

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.65  E-value=0.02  Score=48.01  Aligned_cols=38  Identities=18%  Similarity=0.259  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      .++.||+++|.|.++-+|+.+|..|++.|+.|.++.|+
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            36899999999999999999999999999999998874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.64  E-value=0.0078  Score=57.41  Aligned_cols=79  Identities=18%  Similarity=0.153  Sum_probs=50.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ..|++|+|.||+||+|...+......|++|+.++++. +.+..     +      .+.. .+  .|..+.+..+.+.+..
T Consensus       344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-----~------lga~-~v--~~~~~~~~~~~i~~~t  408 (795)
T 3slk_A          344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-----E------LSRE-HL--ASSRTCDFEQQFLGAT  408 (795)
T ss_dssp             CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-----C------SCGG-GE--ECSSSSTHHHHHHHHS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-----h------cChh-he--eecCChhHHHHHHHHc
Confidence            4689999999999999999888888999999988664 22111     0      1111 11  2444444333333322


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                       .. .++|+++++.|.
T Consensus       409 -~g-~GvDvVld~~gg  422 (795)
T 3slk_A          409 -GG-RGVDVVLNSLAG  422 (795)
T ss_dssp             -CS-SCCSEEEECCCT
T ss_pred             -CC-CCeEEEEECCCc
Confidence             11 259999998874

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.53  E-value=0.023  Score=52.59  Aligned_cols=81  Identities=22%  Similarity=0.262  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh-------------------HHHHHHHHHHHHhhcCCCCCCce
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL-------------------KAANELIQKWQEEWSGKGLPLNI  122 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~v  122 (249)
                      +.+.+|+|.|+ ||+|..+++.|++.|. ++.++|.+.                   .+.+..++.+.+.    +...++
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~i----NP~v~V   89 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQF----YPKANI   89 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTT----CTTCEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHH----CCCCeE
Confidence            34578999988 7999999999999998 888988532                   2344444454443    333567


Q ss_pred             EEEEccCCCHHHHHHHHHHHhccCCCccEEEec
Q 025705          123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINN  155 (249)
Q Consensus       123 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~linn  155 (249)
                      ..+..++++......+       +.+.|++|++
T Consensus        90 ~a~~~~i~~~~~~~~~-------~~~~DlVvda  115 (640)
T 1y8q_B           90 VAYHDSIMNPDYNVEF-------FRQFILVMNA  115 (640)
T ss_dssp             EEEESCTTSTTSCHHH-------HTTCSEEEEC
T ss_pred             EEEecccchhhhhHhh-------hcCCCEEEEC
Confidence            7777777543211111       1356777776

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.50  E-value=0.015  Score=61.88  Aligned_cols=42  Identities=14%  Similarity=0.256  Sum_probs=36.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +|.+|+|.||+||+|...+......|++|+.++++.++.+..
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l 1708 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYL 1708 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHH
Confidence            589999999999999999988888999999999987765544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	249
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-30
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-28
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-26
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-25
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-25
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-25
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-25
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-25
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-25
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-25
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-25
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-24
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-24
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-24
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-24
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	5e-24
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	8e-24
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-23
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-22
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	8e-22
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-21
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-21
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-21
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	5e-21
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-21
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-20
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-20
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-20
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-19
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-19
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-19
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-19
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	8e-19
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-19
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-18
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-18
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-18
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-18
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-18
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-18
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-18
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-18
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-17
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-17
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-17
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-17
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	8e-17
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-16
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-16
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	8e-16
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-15
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-14
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-13
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-13
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-13
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-13
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-13
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	6e-13
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-13
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-12
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-09
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-08
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	4e-08
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	6e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	3e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	6e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	8e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	8e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.002

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (280), Expect = 2e-30
 Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 6/150 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIG  +AR L + G  VV   R +    EL      E    G P  +    
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEEL----AAECKSAGYPGTLIPYR 67

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL + + ++    A   +   + + INNAG+         S  G+++   VN LA ++ 
Sbjct: 68  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 127

Query: 187 SILLFPSLI--RGSPSRIINVNSVMHYVGF 214
           +   + S+         IIN+NS+  +   
Sbjct: 128 TREAYQSMKERNVDDGHIININSMSGHRVL 157

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 7e-28
 Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 6/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+  GIGR  A + A+  + +V+   N     E   K       KGL   +    
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC------KGLGAKVHTFV 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D  + + +   ++     +G + +L+NNAG+    +         E+  +VN LA    
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWT 122

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +    P++ + +   I+ V S   +V  
Sbjct: 123 TKAFLPAMTKNNHGHIVTVASAAGHVSV 150

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =   99 bits (249), Expect = 4e-26
 Identities = 41/148 (27%), Positives = 58/148 (39%), Gaps = 12/148 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG   GIGR IA+  A  GA V +         E+ +            +     +
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEA-----------IGGAFFQ 54

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +DL      VRF E     LG + VL+NNA I + G         +   ++VN  AP  L
Sbjct: 55  VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHL 114

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           S L    + +     I+NV SV      
Sbjct: 115 SALAAREMRKVGGGAIVNVASVQGLFAE 142

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 98.9 bits (246), Expect = 1e-25
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG  SG+G E+ + L   GA V  +  N  A  +L      E   + +      + 
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA----AELGERSM-----FVR 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+ S         A   RLG L+VL+NNAGI   G+ +    + +   +++N  +  + 
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
                 ++       IIN+ SV  ++  
Sbjct: 119 CQQGIAAMKETG-GSIINMASVSSWLPI 145

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.2 bits (246), Expect = 1e-25
 Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 9/147 (6%)

Query: 69  IVTGSTSGIGREIARQLA-ESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMEL 127
           +VTG   GIG  I R L       VV+  R++      +Q+ Q E       L+    +L
Sbjct: 7   LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG------LSPRFHQL 60

Query: 128 DLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           D+  L S+    +      G L VL+NNAGI              E  M+ N      + 
Sbjct: 61  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVC 120

Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVGF 214
             L P +      R++NV+S+M     
Sbjct: 121 TELLPLIKPQ--GRVVNVSSIMSVRAL 145

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 98.5 bits (245), Expect = 2e-25
 Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 7/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG + GIG  I  +LA  GA V    RN K  N+ + +W+ +         +EA  
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG------FKVEASV 63

Query: 127 LDLLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            DL S        +   N   G L++L+NNAGI    E + ++ + Y   M +N  A   
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 123

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           LS+L  P L       ++ ++SV   +  
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAV 152

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 98.5 bits (245), Expect = 2e-25
 Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 7/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG T GIG  I  + A  GA +    RN    NE + KWQ++         +    
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK------GFQVTGSV 63

Query: 127 LDLLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            D        +  +  +    G L +LINN G         ++ + +  H+  N  +   
Sbjct: 64  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 123

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           LS L  P L       II ++S+   V  
Sbjct: 124 LSQLAHPLLKASGCGNIIFMSSIAGVVSA 152

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 97.8 bits (243), Expect = 3e-25
 Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 8/149 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG T GIG  IA +  E GA V++  R+     +  +         G P  I+  +
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKS-------VGTPDQIQFFQ 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D    D   +  +A     GP+  L+NNAGI      ++ +   + + + VN       
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVGF 214
           + L    +  +G  + IIN++S+  +VG 
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGD 149

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 3e-25
 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 15/155 (9%)

Query: 63  VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNI 122
           VN    +VTG+  GIGR  A  L   GA V +   NL+A  +      E++  +      
Sbjct: 1   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ----KT 56

Query: 123 EAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
             ++ D+     +           G L +L+NNAG+ +           +E+ +Q+N ++
Sbjct: 57  LFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN--------WEKTLQINLVS 108

Query: 183 PALLSILLFPSLIR---GSPSRIINVNSVMHYVGF 214
               + L    + +   G    IIN++S+   +  
Sbjct: 109 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV 143

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 97.3 bits (242), Expect = 4e-25
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 10/149 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAM 125
             ++TG  +GIGR IA + A  GA + +A       A   I+          L   +  +
Sbjct: 7   LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN---------LGRRVLTV 57

Query: 126 ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
           + D+     V  F +      G   +L+NNAGI+ +    + + + +++  ++N  +  L
Sbjct: 58  KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFL 117

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           ++    P + R    RIIN+ S  +++  
Sbjct: 118 MAKAFVPGMKRNGWGRIINLTSTTYWLKI 146

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 97.3 bits (242), Expect = 6e-25
 Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 7/152 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TGS++GIGR  A   A  GA V +  R+ +   E  Q+       +    N+ ++ 
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQ---NVNSVV 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF----SKDGYEEHMQVNHLA 182
            D+ +            G+ G L +L+NNAG        K     S + Y+  + +N  +
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 183 PALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
              L+    P L       +   +        
Sbjct: 124 VIALTKKAVPHLSSTKGEIVNISSIASGLHAT 155

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 96.6 bits (240), Expect = 1e-24
 Identities = 40/185 (21%), Positives = 67/185 (36%), Gaps = 27/185 (14%)

Query: 64  NDL---TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           NDL   T I+TG   G+G E ARQ   +GA VV+A    +      ++         L  
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---------LGD 51

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
                 LD+   +   R         G +  L+NNAGI +    +  S + + + +++N 
Sbjct: 52  AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINL 111

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKL 240
               +    + P++       I+N++S                +G         Y  SK 
Sbjct: 112 TGVFIGMKTVIPAMKDAGGGSIVNISS---------------AAGLMGLALTSSYGASKW 156

Query: 241 AQVKL 245
               L
Sbjct: 157 GVRGL 161

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 94.9 bits (235), Expect = 3e-24
 Identities = 40/187 (21%), Positives = 72/187 (38%), Gaps = 17/187 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           + +VTG+  GIG  + +QL +     H++   R+++ A EL                +  
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---------KDSRVHV 55

Query: 125 MELDLLSLDSVVRFSEAWNGRLG--PLHVLINNAGIF-SIGEPQKFSKDGYEEHMQVNHL 181
           + L +    S+  F       +G   L +LINNAG+  S G   + ++    E + VN  
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS---GRRKYTSLMGYSGS 238
           +  LL+  L P L   +     +  SV        +  +  ++          ++ Y  S
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175

Query: 239 KLAQVKL 245
           K A    
Sbjct: 176 KAAINMF 182

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 95.8 bits (238), Expect = 4e-24
 Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  G+GR  A   AE GA VV+                 +   + +        
Sbjct: 9   VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            +  S+++  +  +      G + V++NNAGI       + S + ++   +V+      +
Sbjct: 69  ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQV 128

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           +   +  + + +  RII   S                SG         YS +KL  +
Sbjct: 129 TRAAWDHMKKQNYGRIIMTAS---------------ASGIYGNFGQANYSAAKLGLL 170

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 94.7 bits (235), Expect = 4e-24
 Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG + G+G  IA+ LAE+G  VV+A RNL+ A+E  QK  E++  +       A  
Sbjct: 7   VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE-----TMAFR 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN 179
            D+ + + V +  EA   + G L  ++N AGI      ++F  D + + ++VN
Sbjct: 62  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVN 114

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 94.8 bits (235), Expect = 5e-24
 Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 12/179 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T IVTG   GIG    R +A +GA+V +  R+   A E+ +K  +E+  K      +A +
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK-----TKAYQ 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+ + D V +  +  +  LGP+  LI NAG+  +    + + + +     VN       
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNT 125

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
              +    ++      I V S M          +   S      + + Y+ SK A   L
Sbjct: 126 CRAVAKLWLQKQQKGSIVVTSSMSS-------QIINQSSLNGSLTQVFYNSSKAACSNL 177

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 94.3 bits (234), Expect = 8e-24
 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 7/158 (4%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           P  ++ T I+TGS++GIGR  A   A+ GA+V +  R+ +   E  Q   +    +    
Sbjct: 1   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEK--- 57

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKD----GYEEHM 176
            + ++  D+ + D   +   +   + G + VL+NNAG            D     Y + +
Sbjct: 58  QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTL 117

Query: 177 QVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           ++N  A   ++  + P L+      +   + V      
Sbjct: 118 KLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ 155

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.5 bits (232), Expect = 1e-23
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIGR+  + L  SGA VV   R       L ++             IE + 
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----------GIEPVC 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +DL   D+     E   G +GP+ +L+NNA +  +    + +K+ ++    VN  +   +
Sbjct: 57  VDLGDWDAT----EKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 187 SILLFPSLI-RGSPSRIINVNSVMHYVGF 214
           S ++   +I RG P  I+NV+S++ +V F
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTF 141

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 88.9 bits (220), Expect = 5e-22
 Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 11/144 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG+  GIGR      A+ GA +V          E  +            +    + 
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----------VGAHPVV 55

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+    SV R        LG L  +++ AGI       K   + +E  ++VN     L+
Sbjct: 56  MDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 187 SILLFPSLIRGSPSRIINVNSVMH 210
           +     ++   +P  I+   S ++
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVY 139

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 88.5 bits (219), Expect = 8e-22
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 13/118 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T IVT      G   A +L+E+G  V     + K  +EL                    +
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA------------FAETYPQ 49

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAP 183
           L  +S        EA     G + VL++N       +P  K++ + Y   ++   + P
Sbjct: 50  LKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRP 107

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 1e-21
 Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 28/179 (15%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIGR   + L  +GA VV   R     + L+++             IE + 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------GIEPVC 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +DL   ++  R   +     GP+ +L+NNA +  +    + +K+ ++   +VN  A   +
Sbjct: 59  VDLGDWEATERALGSV----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
           S ++   LI       I   S                  +R  T+   Y  +K A   L
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQ--------------CSQRAVTNHSVYCSTKGALDML 159

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.0 bits (220), Expect = 1e-21
 Identities = 29/144 (20%), Positives = 62/144 (43%), Gaps = 1/144 (0%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG  +GIG+ I ++L E G++VV+A R L+       + Q           +  ++
Sbjct: 14  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANL-PPTKQARVIPIQ 72

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            ++ + + V    ++     G ++ L+NN G   +   +  S  G+   ++ N      +
Sbjct: 73  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 132

Query: 187 SILLFPSLIRGSPSRIINVNSVMH 210
              ++ S ++     I+N+     
Sbjct: 133 CKAVYSSWMKEHGGSIVNIIVPTK 156

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 87.8 bits (217), Expect = 2e-21
 Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 9/145 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V+G   G+G    R +   GA VV      +    +  +         L      + 
Sbjct: 8   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE---------LADAARYVH 58

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD+          +      G LHVL+NNAGI +IG  + ++   ++  + VN     L 
Sbjct: 59  LDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 118

Query: 187 SILLFPSLIRGSPSRIINVNSVMHY 211
              +   +       IIN++S+   
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGL 143

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (214), Expect = 5e-21
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 12/149 (8%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG   GIG  I R    SGA VV+  ++      L Q+                + 
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----------GAVFIL 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+   D V         R G L  ++NNAG     +  ++ S  G+ + +++N L    
Sbjct: 58  CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT 117

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           L+ L  P L +     +IN++S++  +G 
Sbjct: 118 LTKLALPYLRKSQ-GNVINISSLVGAIGQ 145

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 87.0 bits (215), Expect = 5e-21
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 20/181 (11%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           + I+TGS++GIGR  A   A+ GA V +  RN     E  Q+  +          I A+ 
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA---GVPAEKINAVV 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG--EPQKFSKDGYEEHMQVNHLAPA 184
            D+               + G + +L+NNAG              + Y++  ++N  A  
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVK 244
            +                      +           ++V+G + ++    Y+ +K A  +
Sbjct: 123 EM---------------TQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQ 167

Query: 245 L 245
            
Sbjct: 168 Y 168

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 85.9 bits (212), Expect = 1e-20
 Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 9/149 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG   GIG   A+     GA VV+A        ++                I  + 
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC----NNIGSPD---VISFVH 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG--EPQKFSKDGYEEHMQVNHLAPA 184
            D+   + V    +    + G L ++  N G+ S       +   + ++  M +N     
Sbjct: 61  CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 120

Query: 185 LLSILLFPSLIRGSPSRIINVNSVMHYVG 213
           L++      +I      I+   S+  +  
Sbjct: 121 LVAKHAARVMIPAKKGSIVFTASISSFTA 149

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 85.5 bits (211), Expect = 2e-20
 Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 14/150 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG  SG+GR +  +    GA V +  ++ +   EL               N+  + 
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---------HGDNVLGIV 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIG-----EPQKFSKDGYEEHMQVNHL 181
            D+ SL+   + +     R G +  LI NAGI+         P++     ++E   +N  
Sbjct: 58  GDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVK 117

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHY 211
                     P+L+    + I  +++   Y
Sbjct: 118 GYIHAVKACLPALVASRGNVIFTISNAGFY 147

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 84.8 bits (209), Expect = 2e-20
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 7/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG + GIG  I  +LA  GA V    RN K  +E ++ W+E+       LN+E   
Sbjct: 8   TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG------LNVEGSV 61

Query: 127 LDLLSLDSVVRFSEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            DLLS     +  +       G L++L+NNAG+    E + F++  Y   M  N  A   
Sbjct: 62  CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYH 121

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           LS + +P L       +I ++S+  +   
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFSAL 150

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 82.9 bits (204), Expect = 1e-19
 Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 4/114 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG  SG+GR  A +LA  GA + +   + +          E          +    
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA----EVLTTV 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            D+     V  +  A   R G +    NNAGI     P +       + +   +
Sbjct: 62  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSIN 115

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 82.8 bits (204), Expect = 1e-19
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 6/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIGREIA+ LA+S +HV+   R  K+ + ++ +       K          
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI------KSFGYESSGYA 65

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+   + +             + +L+NNAGI       +   D +E+ ++ N  +   +
Sbjct: 66  GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYI 125

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +  +   +I     RIIN++S++   G 
Sbjct: 126 TQPISKRMINNRYGRIINISSIVGLTGN 153

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 82.4 bits (203), Expect = 2e-19
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+TG+ +GIG+EIA   A +GA VV++  N  AAN ++ + Q+      L     A  
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ------LGGQAFACR 66

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQ 177
            D+ S   +   ++    +LG + +L+NNAG      P       +    +
Sbjct: 67  CDITSEQELSALADFAISKLGKVDILVNNAGGGGPK-PFDMPMADFRRAYE 116

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 81.6 bits (201), Expect = 3e-19
 Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 32/183 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I   +  GIG + +R+L +      + +  ++    L      E       +NI    
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-----AELKAINPKVNITFHT 61

Query: 127 LDL-LSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPAL 185
            D+ + +    +  +    +L  + +LIN AGI    +         E  + +N      
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQ--------IERTIAINFTGLVN 113

Query: 186 LSILLFP---SLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQ 242
            +  +         G    I N+ SV  +                    +  YS SK A 
Sbjct: 114 TTTAILDFWDKRKGGPGGIIANICSVTGFNA---------------IHQVPVYSASKAAV 158

Query: 243 VKL 245
           V  
Sbjct: 159 VSF 161

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 80.6 bits (198), Expect = 8e-19
 Identities = 27/144 (18%), Positives = 61/144 (42%), Gaps = 5/144 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             + TG+  GIGR IA +L   GA VV+   +   A E +    ++   +G+     A++
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGV-----AIQ 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+     VV   +      G L  +++N+G+    +  + +++ +++   +N      +
Sbjct: 63  ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122

Query: 187 SILLFPSLIRGSPSRIINVNSVMH 210
           +        RG    + +  + + 
Sbjct: 123 AQQGLKHCRRGGRIILTSSIAAVM 146

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 80.7 bits (198), Expect = 8e-19
 Identities = 22/114 (19%), Positives = 36/114 (31%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG    IG  IA +L + G  VV+  R+ + A + +             L    + 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
           L    LD      +      G   VL+NNA  +                 +   
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 116

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 79.8 bits (196), Expect = 1e-18
 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 13/153 (8%)

Query: 69  IVTGSTSGIGREIARQLAESGAH-------VVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           ++TG+  GIGR IA + A +  H       +V++ R      ++  + + E +       
Sbjct: 5   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA------L 58

Query: 122 IEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHL 181
            + +  D+  +  V R +     R G +  L+NNAG+   G     +++ ++  M  N  
Sbjct: 59  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 118

Query: 182 APALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
               L+  LF  + R     I  + SV     F
Sbjct: 119 GTFFLTQALFALMERQHSGHIFFITSVAATKAF 151

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 79.4 bits (195), Expect = 2e-18
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+TSGIG EIAR+L + G  V +  R  +     +++ +E        +  +   
Sbjct: 4   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA------GVEADGRT 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            D+ S+  +     A   R GP+ VL+NNAG    G   + + + + + ++ N 
Sbjct: 58  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL 111

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 3e-18
 Identities = 28/160 (17%), Positives = 63/160 (39%), Gaps = 9/160 (5%)

Query: 59  PLPPVNDL---TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSG 115
            + P N        +TG  +G+G+ +   L+  GA  V+A R +       ++   +   
Sbjct: 16  AMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN 75

Query: 116 KGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH 175
           K     + A++ D+   D V           G  +++INNA    I   ++ S + ++  
Sbjct: 76  K-----VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTI 130

Query: 176 MQVNHLAPALLSILLFPSLI-RGSPSRIINVNSVMHYVGF 214
             +     A +++ +   LI     +  +++ ++    G 
Sbjct: 131 TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS 170

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 79.1 bits (194), Expect = 3e-18
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 6/126 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG+  GIG+ IA +L + G  V +A  N   A  +  +  +         +  A++
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG------HAVAVK 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           +D+   D V    E     LG   V++NNAG+      +  + +  ++   +N       
Sbjct: 57  VDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWG 116

Query: 187 SILLFP 192
                 
Sbjct: 117 IQAAVE 122

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 78.6 bits (193), Expect = 4e-18
 Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 5/146 (3%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG++ GIG+ IA  L ++G  V++       A E + K  E + G+           D
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ-----AITFGGD 59

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +     V    +      G + V++NNAGI       +  K  ++E + +N     L + 
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGF 214
                +++    RIIN+ SV+  +G 
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGN 145

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 4e-18
 Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 6/148 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             IVTG++ GIGRE+A  LA+ GAHVV+  R+ +   +++    E  +      +   + 
Sbjct: 16  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA-----SAHYIA 70

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
             +  +    +F       +G L +LI N    +             + M+VN L+  +L
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 130

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           ++   P L + +   I+ V+S+   V +
Sbjct: 131 TVAALPMLKQSN-GSIVVVSSLAGKVAY 157

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 78.3 bits (192), Expect = 5e-18
 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 9/148 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTG++ GIGR IA  LA  GA V+    +   A  +            L  N + + 
Sbjct: 6   IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDY---------LGANGKGLM 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           L++    S+    E      G + +L+NNAGI       +   + + + ++ N  +   L
Sbjct: 57  LNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRL 116

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           S  +  ++++    RII + SV+  +G 
Sbjct: 117 SKAVMRAMMKKRHGRIITIGSVVGTMGN 144

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 77.9 bits (191), Expect = 9e-18
 Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TGS++G+G+ +A + A   A VV+  R+ +     + +  ++  G+ +     A++
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI-----AVK 63

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+     V+   ++     G L V+INNAG+ +     + S   + + +  N     L 
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123

Query: 187 SILLFP 192
           S     
Sbjct: 124 SREAIK 129

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.4 bits (190), Expect = 1e-17
 Identities = 38/179 (21%), Positives = 63/179 (35%), Gaps = 29/179 (16%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             I+T +  GIG+  A   A  GA V+    N     EL +              I+   
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----------PGIQTRV 56

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
           LD     +  +  + +   +  L VL N AG    G      +  ++  M +N  +  L+
Sbjct: 57  LD----VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKL 245
                P ++      IIN++S              V S  +   +   YS +K A + L
Sbjct: 113 IKAFLPKMLAQKSGNIINMSS--------------VASSVKGVVNRCVYSTTKAAVIGL 157

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 77.5 bits (190), Expect = 1e-17
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 9/117 (7%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T ++TGS  GIGR  A      GA V +A  NL+AA     +         +     A+ 
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE---------IGPAACAIA 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
           LD+    S+ R       R G + +L+NNA +F +    + +++ Y+    +N    
Sbjct: 58  LDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGT 114

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 76.8 bits (188), Expect = 2e-17
 Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 19/177 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +VTGSTSGIG  IA  LA  GA +V+      A  E ++       G      +    
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV----KVLYDG 61

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            DL   ++V    +    ++G + +L+NNAGI      + F  + ++  + +N  A    
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
           +    P + +    RIIN               +    G     +   Y  +K   V
Sbjct: 122 TAAALPHMKKQGFGRIIN---------------IASAHGLVASANKSAYVAAKHGVV 163

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 75.5 bits (185), Expect = 6e-17
 Identities = 28/144 (19%), Positives = 61/144 (42%), Gaps = 9/144 (6%)

Query: 53  HLQNPLPLPP----VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK 108
           +   P PL P    +     +VTG+  GIGRE+A +L   G  V++   N   + E +  
Sbjct: 2   YDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVA 61

Query: 109 WQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFS 168
             ++            ++ ++  ++ +VR  E      G L ++ +N+G+ S G  +  +
Sbjct: 62  AIKKNGSD-----AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVT 116

Query: 169 KDGYEEHMQVNHLAPALLSILLFP 192
            + ++    +N      ++   + 
Sbjct: 117 PEEFDRVFTINTRGQFFVAREAYK 140

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.8 bits (183), Expect = 8e-17
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 17/154 (11%)

Query: 61  PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPL 120
           PP    + +VTG   GIG  IA++LA  G  V +  R   A   L               
Sbjct: 3   PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------- 48

Query: 121 NIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
               +E+D+   D+V R   A     GP+ VL++NAG+ +     + +++ +E+ +  N 
Sbjct: 49  ---GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL 105

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
                ++     S+ R    R+I + SV    G 
Sbjct: 106 TGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI 139

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.7 bits (180), Expect = 3e-16
 Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 14/155 (9%)

Query: 67  TCIVTGSTSGIGREIARQLAES---GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
            C++TG++ G GR +A QLA     G+ ++++ R+     +L    +EE   +   L + 
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQL----KEELGAQQPDLKVV 63

Query: 124 AMELDLLSLDSV----VRFSEAWNGRLGPLHVLINNAGIFSIGEPQKF---SKDGYEEHM 176
               DL +   V        E          +LINNA                     + 
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 177 QVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY 211
            +N  +   L+     +           VN     
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC 158

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 72.9 bits (178), Expect = 5e-16
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 7/149 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
            C+VTG+   IG   A +LAE G  + +   N +A  +     +E        +   +  
Sbjct: 7   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE------KGVEARSYV 60

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
            D+ S ++V+   ++     G +  L NNAG      P Q +  D +   + +N      
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 120

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +   +   +I  +  RI+N  S+    G 
Sbjct: 121 VLKAVSRQMITQNYGRIVNTASMAGVKGP 149

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 72.0 bits (176), Expect = 8e-16
 Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 9/148 (6%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T +VTG+ SGIGR      A  GA +V   R  +   E +           L     A+ 
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---------LEAEAIAVV 57

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
            D+    +V           G LH + + AG+           + +E+ ++VN     L+
Sbjct: 58  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLV 117

Query: 187 SILLFPSLIRGSPSRIINVNSVMHYVGF 214
           +      L  G    +    + +   G 
Sbjct: 118 ARKAGEVLEEGGSLVLTGSVAGLGAFGL 145

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 70.8 bits (172), Expect = 5e-15
 Identities = 29/142 (20%), Positives = 44/142 (30%), Gaps = 17/142 (11%)

Query: 62  PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGL-- 118
           PV     +VTG+   +GR IA  L   G  V +   R+   AN L            +  
Sbjct: 3   PV----ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 58

Query: 119 ----------PLNIEAMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFS 168
                     P++       +           A     G   VL+NNA  F      +  
Sbjct: 59  QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRND 118

Query: 169 KDGYEEHMQVNHLAPALLSILL 190
           +DG+E  +          + L 
Sbjct: 119 EDGHEPCVGDREAMETATADLF 140

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 2e-14
 Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 2/146 (1%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG +SGIG  +A +LA   +        L+      + W+   +    P ++E ++LD
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 65

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSI 188
           +    SV    E        + VL+ NAG+  +G  +   +D     + VN +    +  
Sbjct: 66  VRDSKSVAAARERVTEG--RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ 123

Query: 189 LLFPSLIRGSPSRIINVNSVMHYVGF 214
              P + R    R++   SV   +G 
Sbjct: 124 AFLPDMKRRGSGRVLVTGSVGGLMGL 149

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 15/154 (9%)

Query: 67  TCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
             +V G T+   +G  IA +L E+GA V ++ +  +   E  +  +              
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-------GALL 62

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEH----MQVNH 180
              D+   + +           G L  L++          +    D   +     ++V+ 
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122

Query: 181 LAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF 214
            +   ++    P L  G    I+ +         
Sbjct: 123 YSLVAVARRAEPLLREGGG--IVTLTYYASEKVV 154

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 65.5 bits (159), Expect = 2e-13
 Identities = 21/117 (17%), Positives = 43/117 (36%), Gaps = 21/117 (17%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V  ++ GIGR +A  L++ GA V +  RN +                        + 
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR---------------SGHRYVV 50

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
            DL     ++        ++  + +L+ NAG    G   + + + ++E +    L  
Sbjct: 51  CDLRKDLDLLF------EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNM 101

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (158), Expect = 2e-13
 Identities = 23/154 (14%), Positives = 50/154 (32%), Gaps = 9/154 (5%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             ++TG  SG+G   A +L   GA  V+            +K           +  E   
Sbjct: 7   VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDV 66

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALL 186
                  ++ +              +   +  +++ + Q  + + ++  + VN +    +
Sbjct: 67  QT---ALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNV 123

Query: 187 SILLFPSLIRGSP------SRIINVNSVMHYVGF 214
             L+   + +  P        IIN  SV  + G 
Sbjct: 124 IRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 157

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 64.9 bits (157), Expect = 3e-13
 Identities = 13/147 (8%), Positives = 42/147 (28%), Gaps = 17/147 (11%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           IV G    +G  I     ++G  V+    +             + +   + ++      +
Sbjct: 6   IVYGGKGALGSAILEFFKKNGYTVLNIDLS-----------ANDQADSNILVDGNKNWTE 54

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPALLS 187
                S++  + +       +  +   AG ++ G    K      +  ++ +  + A+ +
Sbjct: 55  --QEQSILEQTASSLQ-GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111

Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVGF 214
                +        +    +       
Sbjct: 112 K--LATTHLKPGGLLQLTGAAAAMGPT 136

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 64.8 bits (157), Expect = 4e-13
 Identities = 30/159 (18%), Positives = 52/159 (32%), Gaps = 27/159 (16%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
           + + +VTG  SG+GR  A  L   G  VV+     +  + +                   
Sbjct: 1   ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI------------------Y 42

Query: 125 MELDLLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHL 181
           +E D+   + V R  + A         V     G+    +G+      + +   ++VN L
Sbjct: 43  VEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLL 102

Query: 182 APALLSILLFP------SLIRGSPSRIINVNSVMHYVGF 214
               +  L             G    I+N  SV  + G 
Sbjct: 103 GTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ 141

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 64.3 bits (155), Expect = 6e-13
 Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 8/182 (4%)

Query: 67  TCIVTGSTSGIGREIARQL---AESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           + ++TG   G+G  + + L    +   H+    RN + A EL    +   +   L +++ 
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLR 63

Query: 124 AMELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAP 183
             +    + D +V   E      G   +  N                   + +Q N + P
Sbjct: 64  NFD----AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVP 119

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQV 243
            +L+    P L + + +       V        +  +  + G      +  Y  SK A  
Sbjct: 120 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT-DGGMYAYRTSKSALN 178

Query: 244 KL 245
             
Sbjct: 179 AA 180

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.1 bits (155), Expect = 6e-13
 Identities = 15/157 (9%), Positives = 34/157 (21%), Gaps = 17/157 (10%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V G    +G    +        V                   E       + ++  +
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASIDVV-------------ENEEASASVIVKMTD 50

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEP-QKFSKDGYEEHMQVNHLAPAL 185
                 D V        G    +  ++  AG ++ G    K      +   + +     +
Sbjct: 51  SFTEQADQVTAEVGKLLGD-QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 109

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV 222
            S L            +    +     G        +
Sbjct: 110 SSHLATK--HLKEGGLLTLAGAKAALDGTPGMIGYGM 144

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 61.9 bits (149), Expect = 4e-12
 Identities = 26/185 (14%), Positives = 55/185 (29%), Gaps = 44/185 (23%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +++G  +GIG    + L  +G  +V                               +  D
Sbjct: 5   VISGCATGIGAATRKVLEAAGHQIVGIDIRD-----------------------AEVIAD 41

Query: 129 LLSLDSVVR-FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLS 187
           L + +   +  ++        +  L+  AG+    +            + VN+     L 
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKV-------LGNVVSVNYFGATELM 94

Query: 188 ILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN-------------VVSGRRKYTSLMG 234
               P+L +G     + ++SV       D   +              +V    +    + 
Sbjct: 95  DAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154

Query: 235 YSGSK 239
           Y+GSK
Sbjct: 155 YAGSK 159

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 55.7 bits (133), Expect = 6e-10
 Identities = 20/163 (12%), Positives = 52/163 (31%), Gaps = 16/163 (9%)

Query: 67  TCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
             +VTG  S   I   IA+ +   GA +    +N K    +  +      G     +   
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV--EEFAAQLG-----SDIV 59

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGI-----FSIGEPQKFSKDGYEEHMQVN 179
           ++ D+    S+                 +++ G               +++G++    ++
Sbjct: 60  LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDIS 119

Query: 180 HLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV 222
             +   ++      L  G  S ++ ++ +       +   M +
Sbjct: 120 SYSFVAMAKACRSMLNPG--SALLTLSYLGAERAIPNYNVMGL 160

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 53.9 bits (128), Expect = 2e-09
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 65  DLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRN---LKAANELIQKWQEEW 113
             T +VTG T G+G +IAR LA  GA H+++  R+      A EL+ + +   
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG 61

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.1 bits (120), Expect = 3e-08
 Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 64  NDLTCIVTG--STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLN 121
           N+  C + G   T+G G  IA++L++    ++  +        +      ++    +   
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 122 IEAME-LDLLSLDSVVRFSEAWNG 144
            + M  LD+L  D+    +   + 
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDE 84

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 50.5 bits (119), Expect = 4e-08
 Identities = 14/116 (12%), Positives = 37/116 (31%), Gaps = 9/116 (7%)

Query: 67  TCIVTG--STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
             ++ G  +   I   IA+     GA +     N ++  + ++   +E +      +   
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELN------SPYV 59

Query: 125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNH 180
            ELD+   +       +    LG L  ++++         +    +  +       
Sbjct: 60  YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAM 115

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 50.1 bits (118), Expect = 6e-08
 Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 67  TCIVTG--STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW 113
             +V+G  + S I   IAR   E GA +V+   +     + I       
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAK 56

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.5 bits (114), Expect = 1e-07
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE 112
           + G T  +G+ +A +LA  G  +V+  R  + A     +++  
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI 47

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 49.0 bits (115), Expect = 1e-07
 Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 67  TCIVTG--STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA 124
              + G    +G G  +A+ LA +GA +++               + ++    +  +   
Sbjct: 10  RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSL 69

Query: 125 MEL 127
           ME+
Sbjct: 70  MEI 72

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 18/149 (12%), Positives = 35/149 (23%), Gaps = 19/149 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
             +V   T  +G   A  LA  GA VV+  R L  A        + +             
Sbjct: 25  KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE----- 79

Query: 127 LDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPA-L 185
                         +    +   H +     I      +   +  ++    +  +A    
Sbjct: 80  ---------TADDASRAEAVKGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNA 126

Query: 186 LSILLFPSLIRGSPSRIINVNSVMHYVGF 214
              L    +      +          +G 
Sbjct: 127 QPPLGIGGIDATDKGKEYGGKRAFGALGI 155

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 41.2 bits (95), Expect = 6e-05
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 9/71 (12%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME 126
           T  V G+T   G  + R  A  G HV   V +LK       +            N+   +
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA---------IPNVTLFQ 55

Query: 127 LDLLSLDSVVR 137
             LL+   ++ 
Sbjct: 56  GPLLNNVPLMD 66

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.9 bits (95), Expect = 7e-05
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 25/184 (13%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           ++TG    IG  + R + ++    V+ +  L  A  L     E  S             D
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL-----ESLSDISESNRYNFEHAD 58

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVN-----HLAP 183
           +     + R  E +         +++ A    +      S  G    ++ N      L  
Sbjct: 59  ICDSAEITRIFEQYQ-----PDAVMHLAAESHVDR----SITGPAAFIETNIVGTYALLE 109

Query: 184 ALLSILLFPSLIRGSPSRIINVNSVMHY--VGFVDTEDMNVVSGRRKYTSLMG----YSG 237
                       + +  R  ++++   Y  +   D  + +V       T+       YS 
Sbjct: 110 VARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSA 169

Query: 238 SKLA 241
           SK +
Sbjct: 170 SKAS 173

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.0 bits (94), Expect = 8e-05
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIE 123
           VTG+   +   +  QL E G  V    R+      L ++W  ++ G+     +E
Sbjct: 16  VTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 40.1 bits (92), Expect = 1e-04
 Identities = 9/49 (18%), Positives = 15/49 (30%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGL 118
           + G T  IG+ I       G    +  R    +N    +    +   G 
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA 56

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELD 128
           +VTG +  IG     QL ++G  V+  + NL  +   +    E   GK    +   +E D
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVI-ILDNLCNSKRSVLPVIERLGGK----HPTFVEGD 58

Query: 129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLA 182
           + +   +             +  +I+ AG+ ++GE    S     E+   N   
Sbjct: 59  IRNEALMTEILHDHA-----IDTVIHFAGLKAVGE----SVQKPLEYYDNNVNG 103

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 8/45 (17%), Positives = 15/45 (33%)

Query: 69  IVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW 113
            + G+T   G     Q  ++G  V + VR+         +     
Sbjct: 7   AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVV 51

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.5 bits (85), Expect = 8e-04
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 67  TCIVTGSTSGIGREIARQLAESGAH--VVMAVRNLKAANELIQKWQ 110
           T +VTG++   G+ + ++L E          VR+ +   ++  +  
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD 50

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 36.3 bits (82), Expect = 0.002
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 70  VTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGL 118
           + G+T  IGR +A+   + G    + VR +  ++N    +  E +   G 
Sbjct: 8   LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA 57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	249
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.98
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.97
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.97
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.96
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.96
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.95
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.94
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.93
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.93
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.92
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.91
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.91
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.86
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.8
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.74
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.65
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.63
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.62
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.58
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.58
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.57
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.55
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.54
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.54
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.52
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.51
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.51
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.49
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.46
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.44
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.43
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.43
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.37
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.33
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.29
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.21
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.21
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.14
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.03
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.97
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.91
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.79
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.75
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.69
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.26
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.19
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.18
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.12
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.04
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	98.02
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.01
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.0
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.97
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.95
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.9
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.87
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.85
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.75
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.73
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.71
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.71
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.68
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.65
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.64
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.6
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.58
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.54
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.54
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.53
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.47
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.45
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.39
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.33
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.25
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.24
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.22
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.22
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.19
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.17
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.17
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.16
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.14
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.14
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.13
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.12
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.08
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.07
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.06
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.06
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.03
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.01
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.0
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.96
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.91
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.91
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.85
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.85
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.82
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.82
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.8
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.77
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.73
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.73
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.69
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.64
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.63
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.57
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.47
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.44
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.41
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.4
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.36
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.25
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.11
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.08
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.01
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.01
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.88
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.32
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.28
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.17
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.9
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.86
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.85
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.82
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.81
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.74
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.72
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.71
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.64
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.61
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.59
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.54
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.51
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.45
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.43
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.27
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.22
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.19
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.14
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.08
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	94.07
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.0
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.9
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.85
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.83
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.75
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.73
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.64
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.52
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.52
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.16
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.12
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.0
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.96
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.82
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.72
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.67
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.48
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.43
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	92.38
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.38
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.29
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.21
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.08
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	92.07
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.05
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	91.94
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.86
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	91.85
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	91.83
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.81
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.79
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.72
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.71
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.55
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.37
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	91.24
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.21
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.2
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.94
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.9
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	90.82
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.74
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.63
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.52
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.2
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.1
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.93
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.89
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.79
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	89.74
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.7
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	89.69
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.62
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.58
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	89.43
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	89.34
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.34
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.31
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.24
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.04
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	88.93
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	88.75
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.68
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	88.64
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.56
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.52
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.45
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.15
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	88.07
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.7
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.54
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	87.5
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	87.39
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.35
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	87.03
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.69
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	86.39
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.19
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.15
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	86.15
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	85.68
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	85.58
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.28
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	85.13
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	84.97
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	84.75
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	84.62
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.5
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	83.93
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	83.61
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.41
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	83.03
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	82.96
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	82.96
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	82.72
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	82.35
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	82.05
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	81.96
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	81.19
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	80.41

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-40  Score=270.20  Aligned_cols=168  Identities=21%  Similarity=0.300  Sum_probs=158.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.++.||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.      +.++..+.||++|.+++++++
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~------~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL------GAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999998763      247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+++|++|++|||||.....++.+.+.+.|++++++|+.|+++++++++|+|++++.|+||++||.++..+.     
T Consensus        76 ~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~-----  150 (244)
T d1yb1a_          76 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----  150 (244)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----
T ss_pred             HHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC-----
Confidence            999999999999999999998889999999999999999999999999999999999999999999999999887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                |+++.|++||+|+.+|+|.
T Consensus       151 ----------~~~~~Y~asKaal~~~~~~  169 (244)
T d1yb1a_         151 ----------PFLLAYCSSKFAAVGFHKT  169 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCcHHHHHHHHHHHHHHHH
Confidence                      8999999999999999873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.3e-40  Score=270.71  Aligned_cols=163  Identities=23%  Similarity=0.341  Sum_probs=154.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++..         ++..+.+|++|++++++++++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~---------~~~~~~~Dv~~~~~v~~~~~~   71 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA---------NGKGLMLNVTDPASIESVLEK   71 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---------GEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---------CCcEEEEEecCHHHhhhhhhh
Confidence            57899999999999999999999999999999999999999888877643         678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.       
T Consensus        72 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~-------  144 (243)
T d1q7ba_          72 IRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN-------  144 (243)
T ss_dssp             HHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred             hhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC-------
Confidence            9999999999999999998899999999999999999999999999999999999989999999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++.++|++||+|+++|+|.
T Consensus       145 --------~~~~~Y~asKaal~~lt~~  163 (243)
T d1q7ba_         145 --------GGQANYAAAKAGLIGFSKS  163 (243)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCHHHHHHHHHHHHHHHH
Confidence                    8999999999999999984

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.7e-39  Score=269.35  Aligned_cols=169  Identities=22%  Similarity=0.288  Sum_probs=159.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..+.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.      +.++..+.+|++|+++++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~------g~~~~~~~~Dvt~~~~v~~~   77 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF------GYESSGYAGDVSKKEEISEV   77 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT------TCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHH
Confidence            457889999999999999999999999999999999999999999999888662      24789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+++|++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.    
T Consensus        78 ~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~----  153 (251)
T d2c07a1          78 INKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----  153 (251)
T ss_dssp             HHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----
T ss_pred             HHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC----
Confidence            9999999999999999999988889999999999999999999999999999999999999999999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++..+|++||+|+++|+|.
T Consensus       154 -----------~~~~~Y~asKaal~~ltr~  172 (251)
T d2c07a1         154 -----------VGQANYSSSKAGVIGFTKS  172 (251)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCHHHHHHHHHHHHHHHH
Confidence                       8999999999999999984

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.7e-39  Score=267.28  Aligned_cols=168  Identities=28%  Similarity=0.398  Sum_probs=156.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+...     .++..+.+|++|+++++++++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g-----~~~~~~~~Dv~~~~~v~~~~~   75 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-----VETMAFRCDVSNYEEVKKLLE   75 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC-----CcEEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999998877543     478899999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc-CCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV-GFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~-~~~~~~~  219 (249)
                      ++.+++|+||+||||||+...+++.+++.|+|++.+++|+.++++++|+++|+|++++.|+||+++|..+.. +.     
T Consensus        76 ~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~-----  150 (251)
T d1vl8a_          76 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM-----  150 (251)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC-----
Confidence            999999999999999999888899999999999999999999999999999999999999999999987644 44     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       151 ----------~~~~~Y~asKaal~~lt~~  169 (251)
T d1vl8a_         151 ----------PNISAYAASKGGVASLTKA  169 (251)
T ss_dssp             ----------SSCHHHHHHHHHHHHHHHH
T ss_pred             ----------ccccchHHHHHhHHHHHHH
Confidence                      7788999999999999984

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.6e-39  Score=269.19  Aligned_cols=168  Identities=21%  Similarity=0.253  Sum_probs=156.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+....    .++..+.+|++|++++++++++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~----~~~~~~~~Dvt~~~~v~~~~~~   76 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD----AEVLTTVADVSDEAQVEAYVTA   76 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT----CCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC----CeEEEEeccCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999888875432    4789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+++|+||+||||||+.. ..++.+++.++|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.      
T Consensus        77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------  150 (258)
T d1iy8a_          77 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI------  150 (258)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC------
T ss_pred             HHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC------
Confidence            9999999999999999764 457889999999999999999999999999999999999999999999999887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|++||+|+.+|+|.
T Consensus       151 ---------~~~~~Y~asKaal~~lt~~  169 (258)
T d1iy8a_         151 ---------GNQSGYAAAKHGVVGLTRN  169 (258)
T ss_dssp             ---------SSBHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchHHHHHHHHHHHHHHH
Confidence                     8999999999999999984

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.5e-39  Score=267.04  Aligned_cols=163  Identities=22%  Similarity=0.325  Sum_probs=154.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++..         ++.++.+|++|++++++++++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~Dv~~~~~v~~~~~~   73 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---------AARYVHLDVTQPAQWKAAVDT   73 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---------GEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhC---------cceEEEeecCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999999998888777643         678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|++|+||||||.....++.+++.++|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.       
T Consensus        74 ~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-------  146 (244)
T d1nffa_          74 AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-------  146 (244)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc-------
Confidence            9999999999999999988889999999999999999999999999999999999999999999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       147 --------~~~~~Y~asKaal~~ltk~  165 (244)
T d1nffa_         147 --------VACHGYTATKFAVRGLTKS  165 (244)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------ccccchhhHHHHHHHHHHH
Confidence                    8999999999999999984

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=7.4e-39  Score=266.65  Aligned_cols=168  Identities=27%  Similarity=0.358  Sum_probs=158.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.      +.++.++.+|++|++++++++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~------g~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK------GFKVEASVCDLSSRSERQELM   76 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCCceEEEeeCCCHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999988763      257889999999999999999


Q ss_pred             HHHhccCC-CccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLG-PLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g-~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.++++ ++|+||||||+....++.+.+.|+|++++++|+.++++++|+++|+|++++.|+|||+||..+..+.    
T Consensus        77 ~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----  152 (259)
T d2ae2a_          77 NTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV----  152 (259)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC----
T ss_pred             HHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc----
Confidence            99998886 7999999999988889999999999999999999999999999999999999999999999998887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 ++...|++||+|+++|+|.
T Consensus       153 -----------~~~~~Y~asKaal~~lt~~  171 (259)
T d2ae2a_         153 -----------PYEAVYGATKGAMDQLTRC  171 (259)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------ccccchHHHHHHHHHHHHH
Confidence                       8999999999999999984

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3.1e-39  Score=267.99  Aligned_cols=163  Identities=22%  Similarity=0.243  Sum_probs=153.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++.++.+|+++++++++++++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~   72 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG---------DAARYQHLDVTIEEDWQRVVAY   72 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG---------GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------CceEEEEcccCCHHHHHHHHHH
Confidence            6899999999999999999999999999999999999988877766542         3788999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|++|+||||||+....++.+.+.|+|++++++|+.++++++|+++|+|++++.|+||++||.++..+.       
T Consensus        73 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~-------  145 (254)
T d1hdca_          73 AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-------  145 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc-------
Confidence            9999999999999999998889999999999999999999999999999999999999999999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++..+|++||+|+.+|+|.
T Consensus       146 --------~~~~~Y~asKaal~~lt~~  164 (254)
T d1hdca_         146 --------ALTSSYGASKWGVRGLSKL  164 (254)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------cchhhHHHHHHHHHHHHHH
Confidence                    8999999999999999984

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.4e-39  Score=268.27  Aligned_cols=166  Identities=23%  Similarity=0.292  Sum_probs=154.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ++||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+...     .++.++.+|++|++++++++++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g-----~~~~~~~~Dv~~~~~v~~~~~~   76 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-----VKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-----SCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999997 4667777777766542     4788999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|+||+||||||+...+++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.       
T Consensus        77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-------  149 (260)
T d1x1ta1          77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-------  149 (260)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc-------
Confidence            9999999999999999998899999999999999999999999999999999999999999999999999888       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       150 --------~~~~~Y~asKaal~~lt~~  168 (260)
T d1x1ta1         150 --------ANKSAYVAAKHGVVGFTKV  168 (260)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCcchhhhhhhhHHHhHHH
Confidence                    8999999999999999984

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=7e-39  Score=267.00  Aligned_cols=166  Identities=23%  Similarity=0.305  Sum_probs=155.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.      +.++..+.||++|++++++++++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~------g~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK------GVEARSYVCDVTSEEAVIGTVDS   75 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------TSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999999999999998888762      25789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+++|++|+||||||... ..++.+++.++|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.      
T Consensus        76 ~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~------  149 (260)
T d1zema1          76 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP------  149 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC------
T ss_pred             HHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC------
Confidence            9999999999999999764 467899999999999999999999999999999999999999999999999887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|++||+|+.+|+|.
T Consensus       150 ---------~~~~~Y~asKaal~~ltk~  168 (260)
T d1zema1         150 ---------PNMAAYGTSKGAIIALTET  168 (260)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------cchHHHHHHHHHHHHHHHH
Confidence                     8999999999999999984

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.1e-38  Score=265.37  Aligned_cols=164  Identities=25%  Similarity=0.363  Sum_probs=154.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.      +.++..+.+|++|+++++++++++.
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~------g~~~~~~~~Dvs~~~~v~~~~~~~~   74 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA------GVEADGRTCDVRSVPEIEALVAAVV   74 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEeecCCHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999998763      2478999999999999999999999


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchh--hhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPS--LIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~--m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +++|+||+||||||+....++.+++.|+|++++++|+.++++++|+++|+  |.+++.|+||+++|..+..+.       
T Consensus        75 ~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~-------  147 (257)
T d2rhca1          75 ERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-------  147 (257)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC-------
T ss_pred             HHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc-------
Confidence            99999999999999998889999999999999999999999999999997  556777999999999999888       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+.+|+|.
T Consensus       148 --------~~~~~Y~asKaal~~ltk~  166 (257)
T d2rhca1         148 --------VHAAPYSASKHGVVGFTKA  166 (257)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------ccchhHHHHHHHHHHHHHH
Confidence                    8999999999999999984

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-38  Score=265.82  Aligned_cols=169  Identities=25%  Similarity=0.302  Sum_probs=144.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .+++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.      ..++..+.||++++++++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~   75 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK------GFQVTGSVCDASLRPEREKL   75 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCceEEEeccCCCHHHHHHH
Confidence            356899999999999999999999999999999999999999999999988763      24789999999999999999


Q ss_pred             HHHHhccC-CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCc
Q 025705          139 SEAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       139 ~~~~~~~~-g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++++.+++ |++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||..+..+.   
T Consensus        76 ~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~---  152 (259)
T d1xq1a_          76 MQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA---  152 (259)
T ss_dssp             HHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------
T ss_pred             HHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc---
Confidence            99999988 68999999999998889999999999999999999999999999999999989999999999999887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  ++...|++||+|+.+|+|.
T Consensus       153 ------------~~~~~Y~asKaal~~lt~~  171 (259)
T d1xq1a_         153 ------------SVGSIYSATKGALNQLARN  171 (259)
T ss_dssp             --------------CCHHHHHHHHHHHHHHH
T ss_pred             ------------cccccccccccchhhhhHH
Confidence                        8889999999999999984

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.2e-38  Score=264.26  Aligned_cols=165  Identities=25%  Similarity=0.313  Sum_probs=153.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..       ..++.++.+|++|++++++++++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~   75 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-------PDQIQFFQHDSSDEDGWTKLFDA   75 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-------TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-------CCcEEEEEccCCCHHHHHHHHHH
Confidence            58999999999999999999999999999999999999988888777632       24789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCC-eEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPS-RIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g-~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+++|+||+||||||....+++.+++.++|++++++|+.++++++|+++|+|++++.| +|||+||.++..+.      
T Consensus        76 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~------  149 (251)
T d1zk4a1          76 TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD------  149 (251)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC------
T ss_pred             HHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC------
Confidence            99999999999999999988999999999999999999999999999999999988765 89999999999887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               |....|++||+|+.+|+|.
T Consensus       150 ---------~~~~~Y~asKaal~~lt~~  168 (251)
T d1zk4a1         150 ---------PSLGAYNASKGAVRIMSKS  168 (251)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCchhHHHHHHHHhcchHH
Confidence                     8999999999999999884

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-38  Score=264.64  Aligned_cols=165  Identities=25%  Similarity=0.304  Sum_probs=155.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.      +.++.++.+|++|++++++++++
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~------g~~~~~~~~Dvs~~~~~~~~~~~   81 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL------GGQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc------CCcEEEEEccCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999999999999999998873      24788999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|++|+||||||+....++ +.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.       
T Consensus        82 ~~~~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~-------  153 (255)
T d1fmca_          82 AISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-------  153 (255)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-------
T ss_pred             HHHHcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc-------
Confidence            99999999999999998876655 7899999999999999999999999999999999999999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++..+|++||+|+.+|+|.
T Consensus       154 --------~~~~~Y~asKaal~~lt~~  172 (255)
T d1fmca_         154 --------INMTSYASSKAAASHLVRN  172 (255)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------cccccchhHHHHHHHHHHH
Confidence                    8999999999999999984

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.3e-38  Score=263.43  Aligned_cols=164  Identities=22%  Similarity=0.350  Sum_probs=149.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||+++||||++|||+++|++|+++|++|++++|++.+.  ..+.+++      .+.++..+.+|++|++++++++++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~------~g~~~~~~~~Dvs~~~~v~~~~~~   73 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRN------LGRRVLTVKCDVSQPGDVEAFGKQ   73 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHH------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHH------cCCcEEEEEeeCCCHHHHHHHHHH
Confidence            58899999999999999999999999999999999987532  2223332      124789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|+||+||||||+....++.+.+.|+|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.       
T Consensus        74 ~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-------  146 (247)
T d2ew8a1          74 VISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-------  146 (247)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC-------
Confidence            9999999999999999998889999999999999999999999999999999999999999999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              +....|++||+|+.+|+|.
T Consensus       147 --------~~~~~Y~asKaal~~ltk~  165 (247)
T d2ew8a1         147 --------EAYTHYISTKAANIGFTRA  165 (247)
T ss_dssp             --------SSCHHHHHHHHHHHHHHHH
T ss_pred             --------cccccchhhhccHHHHHHH
Confidence                    8999999999999999984

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.9e-38  Score=261.33  Aligned_cols=162  Identities=24%  Similarity=0.356  Sum_probs=152.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCE-------EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAH-------VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~-------Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ++||||||++|||+++|++|+++|++       |++++|+.++++++.+++++.      +.++.++.||++|+++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~------g~~~~~~~~Dvt~~~~v~~~   75 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE------GALTDTITADISDMADVRRL   75 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT------TCEEEEEECCTTSHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEecCCCHHHHHHH
Confidence            46899999999999999999999998       899999999999998888762      25788999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+|||+||.++..+.    
T Consensus        76 ~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----  151 (240)
T d2bd0a1          76 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF----  151 (240)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC----
Confidence            9999999999999999999998899999999999999999999999999999999999989999999999999888    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 |+.+.|++||+|+.+|+|.
T Consensus       152 -----------~~~~~Y~asK~al~~lt~~  170 (240)
T d2bd0a1         152 -----------RHSSIYCMSKFGQRGLVET  170 (240)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCChHHHHHHHHHHHHHHH
Confidence                       8999999999999999984

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.1e-38  Score=260.48  Aligned_cols=160  Identities=28%  Similarity=0.313  Sum_probs=147.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++           ...++++|++|++++++++++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~   69 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----------GGAFFQVDLEDERERVRFVEE   69 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----------TCEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----------CCeEEEEeCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999999976543 33322           345789999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|+||+||||||+...+++.+.+.|+|++++++|+.++++++|+++|+|++++.|+|||+||..+..+.       
T Consensus        70 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~-------  142 (248)
T d2d1ya1          70 AAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-------  142 (248)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-------
T ss_pred             HHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-------
Confidence            9999999999999999998889999999999999999999999999999999999999999999999999888       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+++|+|.
T Consensus       143 --------~~~~~Y~asKaal~~ltk~  161 (248)
T d2d1ya1         143 --------QENAAYNASKGGLVNLTRS  161 (248)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------cccchhHHHHHHHHHHHHH
Confidence                    8999999999999999984

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.8e-38  Score=262.55  Aligned_cols=167  Identities=21%  Similarity=0.290  Sum_probs=153.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH-HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+ .++++.+++++.      +.++..+.+|++|++++++++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~------g~~~~~~~~Dvt~~~~v~~~~   76 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV------GGEAIAVKGDVTVESDVINLV   76 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHH
Confidence            3689999999999999999999999999999999999864 577777777662      247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCC-eEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPS-RIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g-~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+++|+||+||||||+....++.+.+.++|++++++|+.++++++|+++|+|++++.| +||++||.++..+.    
T Consensus        77 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~----  152 (261)
T d1geea_          77 QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----  152 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----
T ss_pred             HHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC----
Confidence            9999999999999999999888899999999999999999999999999999999987755 59999999998887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +....|++||+|+.+|+|.
T Consensus       153 -----------~~~~~Y~asKaal~~lt~~  171 (261)
T d1geea_         153 -----------PLFVHYAASKGGMKLMTET  171 (261)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------ccccccccCCccchhhHHH
Confidence                       8999999999999999984

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.1e-38  Score=261.93  Aligned_cols=162  Identities=26%  Similarity=0.310  Sum_probs=151.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.         .+..++.+|++|++++++++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~~~~~~~~   73 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG---------ERSMFVRHDVSSEADWTLVMAA   73 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---------TTEEEECCCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------CCeEEEEeecCCHHHHHHHHHH
Confidence            5899999999999999999999999999999999999998888877663         2678899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|++|+||||||+....++.+.+.|+|++++++|+.++++++|+++|+|+++ +|+|||+||.++..+.       
T Consensus        74 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~-------  145 (253)
T d1hxha_          74 VQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPI-------  145 (253)
T ss_dssp             HHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCC-------
T ss_pred             HHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCc-------
Confidence            99999999999999999888899999999999999999999999999999999765 5999999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              +...+|++||+|+.+|+|.
T Consensus       146 --------~~~~~Y~asKaal~~lt~~  164 (253)
T d1hxha_         146 --------EQYAGYSASKAAVSALTRA  164 (253)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------cccccccchhHHHHHHHHH
Confidence                    8999999999999999984

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=8.7e-38  Score=259.63  Aligned_cols=162  Identities=25%  Similarity=0.263  Sum_probs=151.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.      +.++..+.||++|+++++++++++.++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~------g~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA------GGHAVAVKVDVSDRDQVFAAVEQARKT   75 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999998763      247899999999999999999999999


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCcccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      +|+||+||||||+....++.+.+.++|++++++|+.|+++++|+++|+|.+++ .|+||++||.++..+.          
T Consensus        76 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------  145 (255)
T d1gega_          76 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN----------  145 (255)
T ss_dssp             TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------
T ss_pred             hCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC----------
Confidence            99999999999998888999999999999999999999999999999887664 5789999999999887          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++.+.|++||+|+.+|+|.
T Consensus       146 -----~~~~~Y~asKaal~~ltk~  164 (255)
T d1gega_         146 -----PELAVYSSSKFAVRGLTQT  164 (255)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHH
T ss_pred             -----cccccchhCHHHHHhhHHH
Confidence                 8999999999999999984

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=5.4e-38  Score=261.02  Aligned_cols=163  Identities=26%  Similarity=0.376  Sum_probs=151.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.         .++..+.+|++|++++++++++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~---------~~~~~~~~Dvt~~~~v~~~~~~   72 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG---------PAACAIALDVTDQASIDRCVAE   72 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC---------TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------CceEEEEeeCCCHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999888877762         3688999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-CCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-SPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+++|+||+||||||.....++.+.+.|+|++.+++|+.++++++|+++|+|.++ +.|+|||+||.++..+.      
T Consensus        73 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------  146 (256)
T d1k2wa_          73 LLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE------  146 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------
T ss_pred             HHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc------
Confidence            99999999999999999888899999999999999999999999999999987654 57999999999999888      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +..+.|++||+|+.+|+|.
T Consensus       147 ---------~~~~~Y~asKaal~~lt~~  165 (256)
T d1k2wa_         147 ---------ALVGVYCATKAAVISLTQS  165 (256)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------ccccchhhhhhHHHHHHHH
Confidence                     8999999999999999984

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=7.4e-38  Score=258.36  Aligned_cols=162  Identities=23%  Similarity=0.314  Sum_probs=150.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEE-cChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAV-RNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~-r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ++||||||++|||+++|++|+++|++|++.+ |+++.++++.+++++.      +.++.++.+|++|+++++++++++.+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~------g~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY------GGQAITFGGDVSKEADVEAMMKTAID   75 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH------TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc------CCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999875 5667788888877663      24789999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                      ++|++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.          
T Consensus        76 ~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~----------  145 (244)
T d1edoa_          76 AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN----------  145 (244)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------
T ss_pred             HcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC----------
Confidence            9999999999999998899999999999999999999999999999999999999999999999999888          


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           ++...|++||+|+.+|+|.
T Consensus       146 -----~~~~~Y~asKaal~~ltk~  164 (244)
T d1edoa_         146 -----IGQANYAAAKAGVIGFSKT  164 (244)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHH
T ss_pred             -----CCCHHHHHHHHHHHHChHH
Confidence                 8999999999999999984

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.9e-38  Score=257.43  Aligned_cols=157  Identities=26%  Similarity=0.356  Sum_probs=138.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+.+                 .++..+.+|++|++++++++
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------------~~~~~~~~Dv~~~~~v~~~~   64 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------------KGLFGVEVDVTDSDAVDRAF   64 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------------TTSEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------------cCceEEEEecCCHHHHHHHH
Confidence            4678999999999999999999999999999999999986432                 35678999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+++|++|+||||||+....++.+.+.|+|++++++|+.++++++|+++|+|++++.|+|||+||.++..+.     
T Consensus        65 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----  139 (237)
T d1uzma1          65 TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----  139 (237)
T ss_dssp             HHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------
T ss_pred             HHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC-----
Confidence            999999999999999999988889999999999999999999999999999999999999999999999999887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+++|+|.
T Consensus       140 ----------~~~~~Y~asKaal~~lt~~  158 (237)
T d1uzma1         140 ----------GNQANYAASKAGVIGMARS  158 (237)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHH
T ss_pred             ----------cccHHHHHHHHHHHHHHHH
Confidence                      8999999999999999984

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-37  Score=255.57  Aligned_cols=172  Identities=24%  Similarity=0.300  Sum_probs=156.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +.+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++...    ..++.++.||+++++++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~----~~~~~~~~~Dls~~~~v~~~v   80 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY----PGTLIPYRCDLSNEEDILSMF   80 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----SSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CceEEEEEccCCCHHHHHHHH
Confidence            5568999999999999999999999999999999999999999999999988532    247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcCCccccCCCCc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS~~~~~~~~~~  217 (249)
                      +++.+++|+||+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++  +|+||++||.++..+.+  
T Consensus        81 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p--  158 (257)
T d1xg5a_          81 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP--  158 (257)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS--
T ss_pred             HHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCC--
Confidence            99999999999999999999888999999999999999999999999999999998754  69999999999876541  


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 .+....|++||+|+.+|+|.
T Consensus       159 -----------~~~~~~Y~~sKaal~~ltr~  178 (257)
T d1xg5a_         159 -----------LSVTHFYSATKYAVTALTEG  178 (257)
T ss_dssp             -----------CGGGHHHHHHHHHHHHHHHH
T ss_pred             -----------CcccHHHHHHHHHHHhCHHH
Confidence                       15667799999999999874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-37  Score=258.24  Aligned_cols=162  Identities=25%  Similarity=0.367  Sum_probs=147.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++          .++.++.||++|+++++++++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----------~~~~~~~~Dvs~~~~v~~~~~   71 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----------PGAVFILCDVTQEDDVKTLVS   71 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----------CCCeEEEccCCCHHHHHHHHH
Confidence            3689999999999999999999999999999999999988877766543          246888999999999999999


Q ss_pred             HHhccCCCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ++.+++|+||+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+++ +|+|||+||.++..+.     
T Consensus        72 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~-----  145 (250)
T d1ydea1          72 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ-----  145 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC-----
T ss_pred             HHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccc-----
Confidence            99999999999999999764 4567889999999999999999999999999999875 4999999999999887     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                +...+|++||+|+.+|+|.
T Consensus       146 ----------~~~~~Y~asKaal~~lt~~  164 (250)
T d1ydea1         146 ----------AQAVPYVATKGAVTAMTKA  164 (250)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------cCcchhHHHHhhHHHHHHH
Confidence                      8999999999999999984

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=6.2e-37  Score=256.24  Aligned_cols=167  Identities=19%  Similarity=0.250  Sum_probs=150.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||+||||||++|||+++|++|+++|++|++++|++++++++.+++...       ..+.++.||++|+++++++++
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-------~~~~~~~~Dv~~~~~v~~~~~   74 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-------DVISFVHCDVTKDEDVRNLVD   74 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-------TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-------CceEEEEccCCCHHHHHHHHH
Confidence            3689999999999999999999999999999999999999998888777431       357888999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIG--EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++.+++|++|+||||||+....  .+.+.+.|+|++++++|+.++++++|+++|+|++++.|+||++||..+..+..   
T Consensus        75 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~---  151 (268)
T d2bgka1          75 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---  151 (268)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---
T ss_pred             HHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc---
Confidence            9999999999999999986544  46788999999999999999999999999999999999999999999887751   


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +....|++||+|+++|+|.
T Consensus       152 -----------~~~~~Y~asKaal~~lt~~  170 (268)
T d2bgka1         152 -----------GVSHVYTATKHAVLGLTTS  170 (268)
T ss_dssp             -----------TSCHHHHHHHHHHHHHHHH
T ss_pred             -----------ccccccchhHHHHHhCHHH
Confidence                       3345799999999999984

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.8e-37  Score=252.69  Aligned_cols=160  Identities=23%  Similarity=0.249  Sum_probs=146.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++           +...+.||++|++++++++++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~   70 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----------GAHPVVMDVADPASVERGFAE   70 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----------TCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----------CCeEEEEecCCHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887765442           457789999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|+||+||||||+....++.+.+.++|++++++|+.++++++|+++|+|++++.+.|+++||. +..+.       
T Consensus        71 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~-------  142 (242)
T d1ulsa_          71 ALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGN-------  142 (242)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCC-------
T ss_pred             HHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCC-------
Confidence            9999999999999999998889999999999999999999999999999999999888888887774 45555       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++..+|++||+|+.+|+|.
T Consensus       143 --------~~~~~Y~asKaal~~ltk~  161 (242)
T d1ulsa_         143 --------LGQANYAASMAGVVGLTRT  161 (242)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCCcchHHHHHHHHHHHHH
Confidence                    7889999999999999984

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.3e-37  Score=256.72  Aligned_cols=169  Identities=24%  Similarity=0.275  Sum_probs=148.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      |+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+...   ...++..+.||++|+++++++++
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~---~~~~~~~~~~Dvs~~~~v~~~~~   77 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV---SEKQVNSVVADVTTEDGQDQIIN   77 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC---CGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---CCCceEEEEccCCCHHHHHHHHH
Confidence            568999999999999999999999999999999999999999999998876421   12478999999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC-CccccCCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEP----QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS-VMHYVGFV  215 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS-~~~~~~~~  215 (249)
                      ++.+++|++|+||||||.....++    .+.+.++|++++++|+.++++++|+++|+|++++ |.+|+++| .++..+. 
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~-  155 (272)
T d1xkqa_          78 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ-  155 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC-
T ss_pred             HHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCC-
Confidence            999999999999999998765554    4567788999999999999999999999999865 55665555 5667776 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    ++...|++||+|+.+|+|.
T Consensus       156 --------------~~~~~Y~asKaal~~ltk~  174 (272)
T d1xkqa_         156 --------------PDFLYYAIAKAALDQYTRS  174 (272)
T ss_dssp             --------------CSSHHHHHHHHHHHHHHHH
T ss_pred             --------------CCcchhhhHHHHHHHHHHH
Confidence                          8999999999999999984

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2e-36  Score=251.64  Aligned_cols=168  Identities=30%  Similarity=0.417  Sum_probs=157.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++++||+||||||++|||+++|++|+++|++|++++|++++++++.+++.+.      +.++.++.+|+++.+++++++
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~------~~~~~~~~~D~s~~~~~~~~~   74 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK------GLNVEGSVCDLLSRTERDKLM   74 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCCceEEEeecCCHHHHHHHH
Confidence            36789999999999999999999999999999999999999999998888763      246888999999999999999


Q ss_pred             HHHhccC-CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          140 EAWNGRL-GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       140 ~~~~~~~-g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      +++.+++ +.+|+||||||.....++.+++.++|++++++|+.++++++++++|.|.+++.|+||++||.++..+.    
T Consensus        75 ~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~----  150 (258)
T d1ae1a_          75 QTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL----  150 (258)
T ss_dssp             HHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC----
T ss_pred             HHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc----
Confidence            9999998 57999999999998899999999999999999999999999999999999999999999999999887    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +....|+++|+|+++|+|.
T Consensus       151 -----------~~~~~Y~~sK~al~~lt~~  169 (258)
T d1ae1a_         151 -----------PSVSLYSASKGAINQMTKS  169 (258)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHH
T ss_pred             -----------ccchhHHHHHHHHHHHHHH
Confidence                       8999999999999999984

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.5e-37  Score=259.96  Aligned_cols=164  Identities=21%  Similarity=0.267  Sum_probs=149.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC---------hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN---------LKAANELIQKWQEEWSGKGLPLNIEAMELDLLS  131 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~---------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  131 (249)
                      .+++||++|||||++|||+++|++|+++|++|++.+|+         .+.+++..+++..         +.....+|++|
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~~~   73 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR---------RGGKAVANYDS   73 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH---------TTCEEEEECCC
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh---------cccccccccch
Confidence            46899999999999999999999999999999998764         4556666666655         33556789999


Q ss_pred             HHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          132 LDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       132 ~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      .++++++++++.+++|+||+||||||+...+++.+++.++|++++++|+.|+++++|+++|+|++++.|+|||+||.++.
T Consensus        74 ~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~  153 (302)
T d1gz6a_          74 VEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  153 (302)
T ss_dssp             GGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc
Confidence            99999999999999999999999999998899999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+.               ++...|++||+|+.+|+|.
T Consensus       154 ~~~---------------~~~~~Y~asKaal~~lt~~  175 (302)
T d1gz6a_         154 YGN---------------FGQANYSAAKLGLLGLANT  175 (302)
T ss_dssp             HCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             CCC---------------CCcHHHHHHHHHHHHHHHH
Confidence            888               8999999999999999974

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.4e-36  Score=253.40  Aligned_cols=169  Identities=21%  Similarity=0.194  Sum_probs=152.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+...   ...++..+.+|++|++++++++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~   77 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV---PAEKINAVVADVTEASGQDDIINT   77 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcceEEEEeeCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999887421   124789999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIG--EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +.+++|+||++|||||.....  ...+.+.|+|++++++|+.++++++|+++|+|++++.|.|+++||.++..+.     
T Consensus        78 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~-----  152 (274)
T d1xhla_          78 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH-----  152 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC-----
T ss_pred             HHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC-----
Confidence            999999999999999976443  3456788999999999999999999999999999988999999998888777     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ++...|++||+|+.+|+|.
T Consensus       153 ----------~~~~~Y~asKaal~~ltk~  171 (274)
T d1xhla_         153 ----------SGYPYYACAKAALDQYTRC  171 (274)
T ss_dssp             ----------TTSHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCceehhhhhHHHHHHHH
Confidence                      8899999999999999984

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.1e-36  Score=252.50  Aligned_cols=168  Identities=23%  Similarity=0.274  Sum_probs=143.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+....   ..++..+.+|+++++++++++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~   78 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVS---EQNVNSVVADVTTDAGQDEILST   78 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---cCceEEEEccCCCHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999998874221   24689999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCc-cccCCCC
Q 025705          142 WNGRLGPLHVLINNAGIFSIG----EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVM-HYVGFVD  216 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~-~~~~~~~  216 (249)
                      +.+++|++|+||||||+..+.    ++.+.+.|+|++++++|+.++++++|+++|+|++++ |.+|+++|.. +..+.  
T Consensus        79 ~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~--  155 (264)
T d1spxa_          79 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT--  155 (264)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC--
T ss_pred             HHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccC--
Confidence            999999999999999986433    355678999999999999999999999999998765 6677666654 56666  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   |....|++||+|+++|+|.
T Consensus       156 -------------~~~~~Y~asKaal~~lt~~  174 (264)
T d1spxa_         156 -------------PDFPYYSIAKAAIDQYTRN  174 (264)
T ss_dssp             -------------TTSHHHHHHHHHHHHHHHH
T ss_pred             -------------CCchhhhhhhhhHHHHHHH
Confidence                         8889999999999999984

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-36  Score=254.22  Aligned_cols=172  Identities=19%  Similarity=0.307  Sum_probs=157.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +-.++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..... .+.++..+.||++|++++++++
T Consensus         7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1           7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPT-KQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTT-CCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccc-cCceEEEEeccCCCHHHHHHHH
Confidence            356899999999999999999999999999999999999999999999998765432 2358999999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      +++.+++|++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||. +..+.     
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~-----  159 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGF-----  159 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCC-----
T ss_pred             HHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccccc-----
Confidence            999999999999999999988889999999999999999999999999999999999999999998764 44444     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                |....|++||+|+.+|+|.
T Consensus       160 ----------~~~~~Y~asKaal~~ltk~  178 (297)
T d1yxma1         160 ----------PLAVHSGAARAGVYNLTKS  178 (297)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------cccccchhHHHHHHHHHHH
Confidence                      7889999999999999985

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=9.1e-36  Score=250.07  Aligned_cols=162  Identities=22%  Similarity=0.291  Sum_probs=145.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.         .++..+.+|+++.+++++++++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~---------~~~~~~~~Dv~~~~~~~~~~~~   72 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG---------DNVLGIVGDVRSLEDQKQAASR   72 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---------CCeeEEecccccHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988877766543         3788999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCC-----CCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGE-----PQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +.+++|++|++|||||+.....     ..+.+++.|++++++|+.++++++|+++|+|++++ |+||+++|.++..+.  
T Consensus        73 ~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~--  149 (276)
T d1bdba_          73 CVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN--  149 (276)
T ss_dssp             HHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT--
T ss_pred             HHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC--
Confidence            9999999999999999865433     23445567999999999999999999999998765 899999999998887  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++.+.|++||+|+.+|+|.
T Consensus       150 -------------~~~~~Y~asKaal~~ltr~  168 (276)
T d1bdba_         150 -------------GGGPLYTAAKHAIVGLVRE  168 (276)
T ss_dssp             -------------SSCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCchHHHHHHHHHHHHHH
Confidence                         8899999999999999984

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-35  Score=247.00  Aligned_cols=159  Identities=25%  Similarity=0.327  Sum_probs=144.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...    +.++.++.+|++|+++++++++++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~   76 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE----PQKTLFIQCDVADQQQLRDTFRKV   76 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC----GGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC----CCcEEEEEeecCCHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999888876432    257899999999999999999999


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC---CCeEEEEcCCccccCCCCccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS---PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      .+++|+||+||||||...        .+.|++++++|+.+++.++++++|+|++++   .|+|||+||.++..+.     
T Consensus        77 ~~~~G~iDilVnnAg~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~-----  143 (254)
T d2gdza1          77 VDHFGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----  143 (254)
T ss_dssp             HHHHSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----
T ss_pred             HHHcCCcCeecccccccc--------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC-----
Confidence            999999999999999853        346899999999999999999999998764   4889999999999888     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                +..++|++||+|+.+|+|.
T Consensus       144 ----------~~~~~Y~asKaal~~ltrs  162 (254)
T d2gdza1         144 ----------AQQPVYCASKHGIVGFTRS  162 (254)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCccchHHHHHHHHHHHHH
Confidence                      8999999999999999873

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-35  Score=245.79  Aligned_cols=169  Identities=20%  Similarity=0.202  Sum_probs=152.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHH---cCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAE---SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~---~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      ..++||+++||||++|||+++|++|++   +|++|++++|+.++++++.+++....+.    .++..+.||+++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~----~~~~~~~~Dvs~~~~v~~   77 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD----LKVVLAAADLGTEAGVQR   77 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTT----SEEEEEECCTTSHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCC----ceEEEEEccCCCHHHHHH
Confidence            468899999999999999999999996   7999999999999999999999875432    589999999999999999


Q ss_pred             HHHHHhcc----CCCccEEEeccccCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC--CCeEEEEcCC
Q 025705          138 FSEAWNGR----LGPLHVLINNAGIFS---IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS--PSRIINVNSV  208 (249)
Q Consensus       138 ~~~~~~~~----~g~id~linnag~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~--~g~Iv~vsS~  208 (249)
                      +++.+.+.    ++.+|++|||||...   .+++.+.+.++|++++++|+.++++++|+++|+|++++  .|+||++||.
T Consensus        78 l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~  157 (259)
T d1oaaa_          78 LLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSL  157 (259)
T ss_dssp             HHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCG
T ss_pred             HHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccc
Confidence            99988763    467999999999754   34577889999999999999999999999999999875  5899999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+.               +++..|++||+|+++|+|.
T Consensus       158 ~~~~~~---------------~~~~~Y~asKaal~~lt~~  182 (259)
T d1oaaa_         158 CALQPY---------------KGWGLYCAGKAARDMLYQV  182 (259)
T ss_dssp             GGTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             cccCCC---------------ccchHHHHHHHHHHHHHHH
Confidence            999888               8999999999999999984

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-35  Score=244.23  Aligned_cols=158  Identities=29%  Similarity=0.443  Sum_probs=142.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.          .+..+.+|++|+++++++++ 
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~-   70 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----------GIEPVCVDLGDWDATEKALG-   70 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----------TCEEEECCTTCHHHHHHHHT-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----------CCeEEEEeCCCHHHHHHHHH-
Confidence            5789999999999999999999999999999999999988877765532          46788999999998876654 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc-CCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-GSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                         ++|+||+||||||+....++.+++.++|++.+++|+.++++++|+++|+|++ .++|+||+++|..+..+.      
T Consensus        71 ---~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------  141 (242)
T d1cyda_          71 ---GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------  141 (242)
T ss_dssp             ---TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------
T ss_pred             ---HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC------
Confidence               5799999999999988889999999999999999999999999999998765 457899999999988887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               |+...|++||+|+.+|+|.
T Consensus       142 ---------~~~~~Y~asKaal~~lt~~  160 (242)
T d1cyda_         142 ---------PNLITYSSTKGAMTMLTKA  160 (242)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------CccccccchHHHHHHHHHH
Confidence                     8999999999999999984

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-35  Score=243.36  Aligned_cols=158  Identities=28%  Similarity=0.378  Sum_probs=143.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.          .+..+.+|++|+++++++++ 
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----------~~~~~~~Dv~d~~~v~~~~~-   72 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------GIEPVCVDLGDWEATERALG-   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----------TCEEEECCTTCHHHHHHHHT-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----------CCeEEEEeCCCHHHHHHHHH-
Confidence            5899999999999999999999999999999999999988877765542          36788999999999877664 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhh-cCCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLI-RGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~-~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                         ++|+||+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|. +++.|+||++||.++..+.      
T Consensus        73 ---~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------  143 (244)
T d1pr9a_          73 ---SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------  143 (244)
T ss_dssp             ---TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------
T ss_pred             ---HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc------
Confidence               579999999999999888999999999999999999999999999999765 4567999999999998887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               +....|++||+|+++|+|.
T Consensus       144 ---------~~~~~Y~asKaal~~lt~~  162 (244)
T d1pr9a_         144 ---------TNHSVYCSTKGALDMLTKV  162 (244)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------cchhhhhhhHHHHHHHHHH
Confidence                     8999999999999999985

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3.1e-35  Score=244.83  Aligned_cols=174  Identities=22%  Similarity=0.270  Sum_probs=153.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++..+.+|++|++++++++++
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g-----~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-----VKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999888877543     4788999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc-CCCCeEEEEcCCccccCCCCcccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-GSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+++|++|+||||||+....++.+.+.++|++++++|+.++++++|+++|+|++ +..|.|++++|.........    
T Consensus        81 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~----  156 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----  156 (260)
T ss_dssp             HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----
T ss_pred             HHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc----
Confidence            9999999999999999988889999999999999999999999999999999865 45677888888766544310    


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          .....++...|++||+|+.+|+|.
T Consensus       157 ----~~~~~~~~~~Y~asKaal~~lt~~  180 (260)
T d1h5qa_         157 ----SLNGSLTQVFYNSSKAACSNLVKG  180 (260)
T ss_dssp             ----ETTEECSCHHHHHHHHHHHHHHHH
T ss_pred             ----ccccCccccchhhhhhhHHHHHHH
Confidence                112236778999999999999984

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-34  Score=241.55  Aligned_cols=166  Identities=25%  Similarity=0.293  Sum_probs=154.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+...     ..+..+.+|+++.+.+....++
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~   85 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-----ASAHYIAGTMEDMTFAEQFVAQ   85 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----SEEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhc-----ccchhhhhhhhhHHHHHHHHHH
Confidence            38999999999999999999999999999999999999999999988877532     4788899999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+.+|.+|++|||||.....++.+.+.+++++++++|+.+++.++++++|+|+++ +|+||++||.++..+.       
T Consensus        86 ~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~-------  157 (269)
T d1xu9a_          86 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAY-------  157 (269)
T ss_dssp             HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCC-------
T ss_pred             HHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCC-------
Confidence            99999999999999999888888999999999999999999999999999999754 5999999999999888       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              |++..|++||+|+++|+|.
T Consensus       158 --------p~~~~Y~asKaal~~~~~~  176 (269)
T d1xu9a_         158 --------PMVAAYSASKFALDGFFSS  176 (269)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCchHHHHHHHHHHHHHHH
Confidence                    8999999999999999874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.9e-35  Score=243.86  Aligned_cols=155  Identities=20%  Similarity=0.236  Sum_probs=140.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      |+|||||++|||+++|++|+++|++|++.+|+.+.++++......            +..+|+++.++++++++++.+++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------------~~~~dv~~~~~~~~~~~~~~~~~   69 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------------YPQLKPMSEQEPAELIEAVTSAY   69 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------------CTTSEECCCCSHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------------EEEeccCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999999998887665433221            23589999999999999999999


Q ss_pred             CCccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          147 GPLHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       147 g~id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                      |+||+||||||+.. ..++.+.+.|+|++.+++|+.++++++|+++|+|++++.|+|||+||.++..+.           
T Consensus        70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~-----------  138 (252)
T d1zmta1          70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----------  138 (252)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----------
T ss_pred             CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc-----------
Confidence            99999999999764 468899999999999999999999999999999999999999999999998887           


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          +....|++||+|+.+|+|.
T Consensus       139 ----~~~~~Y~asKaal~~lt~~  157 (252)
T d1zmta1         139 ----KELSTYTSARAGACTLANA  157 (252)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHH
T ss_pred             ----ccccccccccccHHHHHHH
Confidence                8899999999999999984

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=243.22  Aligned_cols=175  Identities=24%  Similarity=0.281  Sum_probs=147.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +++|||||++|||+++|++|+++ |++|++++|+.++++++.+++++..      .++.++.||++|.++++++++++.+
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dvs~~~sv~~~~~~~~~   77 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG------LSPRFHQLDIDDLQSIRALRDFLRK   77 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT------CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEEecCCHHHHHHHHHHHHH
Confidence            45699999999999999999986 8999999999999999999998742      4678999999999999999999999


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc----
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM----  220 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~----  220 (249)
                      ++|+||+||||||+....+..+.+.++|++++++|++|+++++++++|+|+++  |+|||+||+.+..+.+...+-    
T Consensus        78 ~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k  155 (275)
T d1wmaa1          78 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQK  155 (275)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             hcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhhhh
Confidence            99999999999999888888888899999999999999999999999999764  899999999887654221100    


Q ss_pred             ----------------------ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 ----------------------NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ----------------------~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                            ..........+...|++||+|+.+|+|.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~  205 (275)
T d1wmaa1         156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRI  205 (275)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHH
T ss_pred             hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHH
Confidence                                  0000112334556799999999999864

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=3.2e-34  Score=237.78  Aligned_cols=159  Identities=18%  Similarity=0.253  Sum_probs=139.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC-CHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL-SLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~  140 (249)
                      +++||+||||||++|||+++|++|+++|++|++++|+.++.++. +++.....    ..++.++.+|++ +.++++++++
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~   76 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINP----KVNITFHTYDVTVPVAESKKLLK   76 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCT----TSEEEEEECCTTSCHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCC----CCCEEEEEeecCCCHHHHHHHHH
Confidence            58899999999999999999999999999999998887775544 34443322    258899999998 6778999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC---CCCeEEEEcCCccccCCCCc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG---SPSRIINVNSVMHYVGFVDT  217 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~---~~g~Iv~vsS~~~~~~~~~~  217 (249)
                      ++.+++|+||+||||||..        +.+.|++++++|+.|+++++++++|+|.++   ..|+||++||.+++.+.   
T Consensus        77 ~~~~~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~---  145 (254)
T d1sbya1          77 KIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI---  145 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---
T ss_pred             HHHHHcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC---
Confidence            9999999999999999963        467899999999999999999999999875   35899999999999887   


Q ss_pred             cccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          218 EDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                  +++..|++||+|+.+|+|.
T Consensus       146 ------------~~~~~Y~asKaal~~~t~~  164 (254)
T d1sbya1         146 ------------HQVPVYSASKAAVVSFTNS  164 (254)
T ss_dssp             ------------TTSHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCHHHHHHHHHHHHHHHH
Confidence                        8999999999999999984

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.3e-33  Score=234.86  Aligned_cols=165  Identities=24%  Similarity=0.323  Sum_probs=146.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc-ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVR-NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ++++||+||||||++|||+++|++|+++|++|++.++ +.+.++++.+++.+.      +.++..+.+|++|++++++++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~------g~~~~~~~~D~~~~~~v~~~~   75 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL------GAQGVAIQADISKPSEVVALF   75 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc------CCCceEecCCCCCHHHHHHHH
Confidence            3589999999999999999999999999999998765 555567777777652      247899999999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc-CCCCcc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV-GFVDTE  218 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~-~~~~~~  218 (249)
                      +++.+++|+||++|||||.....++.+.+.++|++.+++|+.++++++|+++|+|+++  |++++++|..+.. +.    
T Consensus        76 ~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~----  149 (259)
T d1ja9a_          76 DKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGI----  149 (259)
T ss_dssp             HHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSC----
T ss_pred             HHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCC----
Confidence            9999999999999999999988899999999999999999999999999999999764  6788888876544 44    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                 +.+..|++||+|+.+|+|.
T Consensus       150 -----------~~~~~Y~asK~al~~l~r~  168 (259)
T d1ja9a_         150 -----------PNHALYAGSKAAVEGFCRA  168 (259)
T ss_dssp             -----------CSCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchhHHHHHHHHHHHHHH
Confidence                       8889999999999999984

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-34  Score=239.46  Aligned_cols=164  Identities=25%  Similarity=0.344  Sum_probs=141.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEE---EcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMA---VRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~---~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .|+||||||++|||+++|++|+++|++|+++   .|+.+..++..+...+ ...  .+.++..+.||++|.+++++++++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~-~~~--~~~~~~~~~~Dv~~~~~~~~~~~~   78 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARA-LAC--PPGSLETLQLDVRDSKSVAAARER   78 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHH-TTC--CTTSEEEEECCTTCHHHHHHHHHT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHH-Hhc--cCCceEEEeccccchHhhhhhhhh
Confidence            4789999999999999999999999985544   5555544444333333 221  235899999999999999999998


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+  |.+|++|||||....+++.+.+.|+|++++++|+.|+++++|+++|+|++++.|+|||+||+++..+.       
T Consensus        79 ~~~--g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~-------  149 (285)
T d1jtva_          79 VTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-------  149 (285)
T ss_dssp             CTT--SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-------
T ss_pred             ccc--cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC-------
Confidence            754  78999999999998889999999999999999999999999999999999999999999999999988       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              |+.+.|++||+|+++|++.
T Consensus       150 --------~~~~~Y~asKaal~~l~~~  168 (285)
T d1jtva_         150 --------PFNDVYCASKFALEGLCES  168 (285)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------CCchHHHHHHHHHHHHHHH
Confidence                    8999999999999999874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4.2e-34  Score=235.34  Aligned_cols=160  Identities=24%  Similarity=0.264  Sum_probs=138.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++         +.++.++++|+++++++++++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dls~~~~i~~~~~~   72 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---------EAEAIAVVADVSDPKAVEAVFAE   72 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---------CSSEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---------CCceEEEEecCCCHHHHHHHHHH
Confidence            478999999999999999999999999999999999998876655443         24788999999999999999999


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                      +.+++|++|+||||||.....++.+.+.++|++++++|+.+++.++|+++|+|.++  +.|+++||.+. .+.       
T Consensus        73 i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~a~-~~~-------  142 (241)
T d2a4ka1          73 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVAG-LGA-------  142 (241)
T ss_dssp             HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCCTT-CCH-------
T ss_pred             HHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc--cceeecccccc-ccc-------
Confidence            99999999999999999888899999999999999999999999999999998764  46666666543 333       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              |++..|+++|+|+++|+|+
T Consensus       143 --------~~~~~Y~~sK~al~~lt~~  161 (241)
T d2a4ka1         143 --------FGLAHYAAGKLGVVGLART  161 (241)
T ss_dssp             --------HHHHHHHHCSSHHHHHHHH
T ss_pred             --------cCccccchhhHHHHHHHHH
Confidence                    6788899999999999985

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-33  Score=231.68  Aligned_cols=150  Identities=19%  Similarity=0.248  Sum_probs=134.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++.               ...++.+|+++.      ++.+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---------------~~~~~~~Dv~~~------~~~~   60 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------------GHRYVVCDLRKD------LDLL   60 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------------CSEEEECCTTTC------HHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---------------CCcEEEcchHHH------HHHH
Confidence            6899999999999999999999999999999999997655432               235678999864      3445


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                      .+++|+||+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||+++|..+..+.        
T Consensus        61 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~--------  132 (234)
T d1o5ia_          61 FEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI--------  132 (234)
T ss_dssp             HHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             HHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc--------
Confidence            556799999999999988888999999999999999999999999999999999999999999999888877        


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                             +....|++||+|+.+|+|.
T Consensus       133 -------~~~~~Y~asKaal~~ltk~  151 (234)
T d1o5ia_         133 -------ENLYTSNSARMALTGFLKT  151 (234)
T ss_dssp             -------TTBHHHHHHHHHHHHHHHH
T ss_pred             -------cccccchhHHHHHHHHHHH
Confidence                   8999999999999999984

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.4e-33  Score=231.78  Aligned_cols=167  Identities=22%  Similarity=0.342  Sum_probs=148.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.      +.++.++.+|++|+++++++
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~------g~~~~~~~~D~~~~~~v~~~   86 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN------GSDAACVKANVGVVEDIVRM   86 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEEEEECCTTCHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh------CCceeeEeCCCCCHHHHHHH
Confidence            346999999999999999999999999999999999887 45667777776662      24789999999999999999


Q ss_pred             HHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc
Q 025705          139 SEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE  218 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~  218 (249)
                      ++++.+.+|++|++|||+|.....++.+.+.++|++++++|+.+++.++|+++|+|.++  |++++++|..+..+.    
T Consensus        87 ~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~----  160 (272)
T d1g0oa_          87 FEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKA----  160 (272)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSS----
T ss_pred             HHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--ccccccccccccccc----
Confidence            99999999999999999999888899999999999999999999999999999999764  699999998765543    


Q ss_pred             ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                .+....|++||+|+++|+|.
T Consensus       161 ----------~~~~~~Y~asKaal~~ltk~  180 (272)
T d1g0oa_         161 ----------VPKHAVYSGSKGAIETFARC  180 (272)
T ss_dssp             ----------CSSCHHHHHHHHHHHHHHHH
T ss_pred             ----------ccchhhHHHHHHHHHHHHHH
Confidence                      17778899999999999984

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.1e-33  Score=231.04  Aligned_cols=164  Identities=24%  Similarity=0.345  Sum_probs=140.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHH---HcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLA---ESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~---~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      |+||||||++|||+++|++|+   ++|++|++++|++++++++.+...+       ..++.++.||++|+++++++++++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~Dvs~~~~v~~~~~~i   75 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-------HSNIHILEIDLRNFDAYDKLVADI   75 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-------CTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc-------CCcEEEEEEEeccHHHHHHHHhhh
Confidence            789999999999999999997   5799999999999988776543332       147899999999999999999988


Q ss_pred             hc--cCCCccEEEeccccCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-----------CCCeEEEEcCC
Q 025705          143 NG--RLGPLHVLINNAGIFSIG-EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-----------SPSRIINVNSV  208 (249)
Q Consensus       143 ~~--~~g~id~linnag~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----------~~g~Iv~vsS~  208 (249)
                      ++  +++++|+||||||+.... ++.+.+.++|++++++|+.|++.++++++|+|+++           ++|+||+++|.
T Consensus        76 ~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~  155 (248)
T d1snya_          76 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  155 (248)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccc
Confidence            54  678999999999986544 57788999999999999999999999999999863           46899999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++..+.            .+.++..+|++||+|+.+|+|.
T Consensus       156 ~g~~~~------------~~~~~~~~Y~aSKaal~~lt~~  183 (248)
T d1snya_         156 LGSIQG------------NTDGGMYAYRTSKSALNAATKS  183 (248)
T ss_dssp             GGCSTT------------CCSCCCHHHHHHHHHHHHHHHH
T ss_pred             ccccCC------------CCCCChHHHHHHHHHHHHHHHH
Confidence            887653            2226778999999999999874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.1e-33  Score=230.27  Aligned_cols=163  Identities=16%  Similarity=0.135  Sum_probs=142.9

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      +++||++|||||+|  |||+++|++|+++|++|++.+|+++..++. +++.+..      .+...+.+|++|++++++++
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~------~~~~~~~~D~~~~~~v~~~~   77 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEAL------GGALLFRADVTQDEELDALF   77 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHT------TCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhcc------CcccccccccCCHHHHHHHH
Confidence            68999999999987  999999999999999999999987554443 4443321      35678899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+++|+||+||||||...    ..++.+.+.++|+..+++|+.+++.++|+++|+|+++  |+|||+||..+..+. 
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~~-  154 (256)
T d1ulua_          78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVV-  154 (256)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSBC-
T ss_pred             HHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCCC-
Confidence            999999999999999999754    3456788999999999999999999999999999764  899999999998887 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    |+...|++||+|+.+|+|.
T Consensus       155 --------------~~~~~Y~asKaal~~ltr~  173 (256)
T d1ulua_         155 --------------PKYNVMAIAKAALEASVRY  173 (256)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------CCchHHHHHHHHHHHHHHH
Confidence                          8999999999999999984

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.1e-32  Score=224.57  Aligned_cols=158  Identities=25%  Similarity=0.337  Sum_probs=138.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++++++..++           ..+....+|+.+.+.++...+
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~   70 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----------PGIQTRVLDVTKKKQIDQFAN   70 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS-----------TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-----------cCCceeeeecccccccccccc
Confidence            458999999999999999999999999999999999998776554221           356788899988776665544


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCcccc-CCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYV-GFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~-~~~~~~~  219 (249)
                          .++++|+||||||.....++.+.+.++|++.+++|+.+++.++|+++|+|.+++.|+||+++|..+.. +.     
T Consensus        71 ----~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~-----  141 (245)
T d2ag5a1          71 ----EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV-----  141 (245)
T ss_dssp             ----HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC-----
T ss_pred             ----ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCc-----
Confidence                46799999999999988899999999999999999999999999999999999999999999987743 44     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                +++..|+++|+|+++|+|.
T Consensus       142 ----------~~~~~Y~~sKaal~~l~r~  160 (245)
T d2ag5a1         142 ----------VNRCVYSTTKAAVIGLTKS  160 (245)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHH
T ss_pred             ----------cchhHHHHHHHHHHHHHHH
Confidence                      7889999999999999985

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.97  E-value=3.6e-31  Score=223.66  Aligned_cols=171  Identities=16%  Similarity=0.250  Sum_probs=155.1

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           58 LPLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        58 ~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .+..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...     .++..+.+|+++.+++++
T Consensus        18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g-----~~~~~~~~D~~~~~~v~~   92 (294)
T d1w6ua_          18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-----NKVHAIQCDVRDPDMVQN   92 (294)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcC-----CceEEEEecccChHHHHH
Confidence            344689999999999999999999999999999999999999999999999887643     368899999999999999


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhc-CCCCeEEEEcCCccccCCCC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIR-GSPSRIINVNSVMHYVGFVD  216 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-~~~g~Iv~vsS~~~~~~~~~  216 (249)
                      +++.+.++++++|+||||||.....++.+.+.+++++.+++|+.+.+.+.+...+.+.. +..+.+++++|..+..+.  
T Consensus        93 ~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~--  170 (294)
T d1w6ua_          93 TVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS--  170 (294)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC--
T ss_pred             Hhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc--
Confidence            99999999999999999999988888899999999999999999999999888777665 456778889998888777  


Q ss_pred             ccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          217 TEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                   ++..+|++||+|+.+|+|.
T Consensus       171 -------------~~~~~YsasKaal~~ltk~  189 (294)
T d1w6ua_         171 -------------GFVVPSASAKAGVEAMSKS  189 (294)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHH
T ss_pred             -------------cccchHHHHHHHHHHHHHH
Confidence                         8889999999999999985

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=3.6e-32  Score=224.90  Aligned_cols=168  Identities=24%  Similarity=0.323  Sum_probs=139.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..|+||||||++|||+++|++|+++|+  +|++.+|+.+++++..    +.     ...++.++.+|++|.+++++++++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~-----~~~~~~~~~~Dvs~~~~v~~~~~~   72 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI-----KDSRVHVLPLTVTCDKSLDTFVSK   72 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC-----CCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hh-----hCCceEEEEEecCCHHHHHHHHHH
Confidence            459999999999999999999999996  6889999998876543    21     124789999999999999999999


Q ss_pred             HhccCCC--ccEEEeccccCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-----------CCCeEEEEcC
Q 025705          142 WNGRLGP--LHVLINNAGIFS-IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-----------SPSRIINVNS  207 (249)
Q Consensus       142 ~~~~~g~--id~linnag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----------~~g~Iv~vsS  207 (249)
                      +.+.++.  +|+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|+|+++           ..|++++++|
T Consensus        73 i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~  152 (250)
T d1yo6a1          73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS  152 (250)
T ss_dssp             HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred             HHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccc
Confidence            9887654  999999999864 3667888999999999999999999999999999863           2478999999


Q ss_pred             CccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          208 VMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+......        ......+..+|++||+|+.+|+|.
T Consensus       153 ~~~~~~~~~--------~~~~~~~~~aY~aSKaal~~l~~~  185 (250)
T d1yo6a1         153 GLGSITDNT--------SGSAQFPVLAYRMSKAAINMFGRT  185 (250)
T ss_dssp             GGGCSTTCC--------STTSSSCBHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCc--------ccccchhHHHHHHHHHHHHHHHHH
Confidence            877665421        112235566799999999999874

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.7e-31  Score=217.73  Aligned_cols=164  Identities=24%  Similarity=0.275  Sum_probs=147.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..         +.....+|+.+.+.+++..+
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~~~~~~~   71 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN---------NCVFAPADVTSEKDVQTALA   71 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT---------TEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC---------Cccccccccccccccccccc
Confidence            368999999999999999999999999999999999999999888777643         67888999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCC------CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC------CCCeEEEEcCC
Q 025705          141 AWNGRLGPLHVLINNAGIFSI------GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG------SPSRIINVNSV  208 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~------~~g~Iv~vsS~  208 (249)
                      ++...++.+|.+++|+++...      .++.+.+.++|++++++|+.++++++|+++|+|..+      ++|+|||+||.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~  151 (248)
T d2o23a1          72 LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  151 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             ccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecch
Confidence            999888999999999886543      344667889999999999999999999999998653      57899999999


Q ss_pred             ccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          209 MHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+.               +++.+|++||+|+++|+|.
T Consensus       152 ~~~~~~---------------~~~~~Y~asKaal~~lt~~  176 (248)
T d2o23a1         152 AAFEGQ---------------VGQAAYSASKGGIVGMTLP  176 (248)
T ss_dssp             HHHHCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             hhccCC---------------CCchHHHHHHHHHHHHHHH
Confidence            999887               8999999999999999984

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=2.7e-29  Score=205.74  Aligned_cols=152  Identities=11%  Similarity=0.039  Sum_probs=130.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +||++|||||++|||+++|++|+++|++|++++++..+.                ........+|..+.++++.+.+++.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~   64 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------------ASASVIVKMTDSFTEQADQVTAEVG   64 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------------SSEEEECCCCSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------------ccccceeecccCcHHHHHHHHHHHH
Confidence            589999999999999999999999999999999875321                1244566788888888888887777


Q ss_pred             ccC--CCccEEEeccccCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          144 GRL--GPLHVLINNAGIFSI-GEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       144 ~~~--g~id~linnag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.+  +++|+||||||.... ....+.+.++|++++++|+.++++++++++|+|++  +|+||++||.++..+.      
T Consensus        65 ~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~------  136 (236)
T d1dhra_          65 KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGT------  136 (236)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCC------
T ss_pred             HHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCc------
Confidence            654  469999999997543 44566778999999999999999999999999976  4899999999998887      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++...|++||+|+++|+|.
T Consensus       137 ---------~~~~~Y~asKaal~~lt~~  155 (236)
T d1dhra_         137 ---------PGMIGYGMAKGAVHQLCQS  155 (236)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHH
T ss_pred             ---------cCCcccHHHHHHHHHHHHH
Confidence                     8999999999999999984

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.96  E-value=2.5e-28  Score=204.64  Aligned_cols=168  Identities=23%  Similarity=0.242  Sum_probs=132.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC-hHHHHHHHHHHHHhhcCCC------------CCCceEEEEccCCCH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRN-LKAANELIQKWQEEWSGKG------------LPLNIEAMELDLLSL  132 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~-~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~D~~~~  132 (249)
                      -++|||||++|||+++|++|+++|++|++.+++ .+.+++..+++.+..+...            ...++....+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            378999999999999999999999999998765 5567777777776543210            112334456779999


Q ss_pred             HHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHH--------------HHHHhhhhHHHHHHHHhchh-----
Q 025705          133 DSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYE--------------EHMQVNHLAPALLSILLFPS-----  193 (249)
Q Consensus       133 ~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~--------------~~~~vN~~~~~~l~~~~l~~-----  193 (249)
                      ++++++++++.+++|+||+||||||...+.++.+.+.++++              .++++|+.++++++|.+.+.     
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            99999999999999999999999999887777776665554              47899999999999997765     


Q ss_pred             -hhcCCCCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          194 -LIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       194 -m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                       |.+.+.|+||+++|..+..+.               +++.+|++||+|+++|+|.
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~---------------~~~~~Y~asKaal~~lt~~  203 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPL---------------LGYTIYTMAKGALEGLTRS  203 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCcccccccccccCCc---------------cceeeeccccccchhhhHH
Confidence             444567899999999888877               8899999999999999985

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=4.5e-29  Score=204.29  Aligned_cols=151  Identities=15%  Similarity=0.075  Sum_probs=127.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ++.||||||++|||+++|++|+++|++|++++|++++.                ........+|+.+.+......+.+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------------ADSNILVDGNKNWTEQEQSILEQTAS   65 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------------SSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------------ccccceeccccCchhHHHHHHHHHHH
Confidence            35679999999999999999999999999999986431                02345567888888887776666665


Q ss_pred             --cCCCccEEEeccccCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc
Q 025705          145 --RLGPLHVLINNAGIFSIG-EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN  221 (249)
Q Consensus       145 --~~g~id~linnag~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~  221 (249)
                        ++++||+||||||..... +..+.+.+.|+.++++|+.+++.++|+++|+|+++  |+||++||..+..+.       
T Consensus        66 ~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~-------  136 (235)
T d1ooea_          66 SLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPT-------  136 (235)
T ss_dssp             HHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCC-------
T ss_pred             HhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCc-------
Confidence              468999999999986544 34555678899999999999999999999999764  899999999999887       


Q ss_pred             cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                              ++...|++||+|+.+|+|.
T Consensus       137 --------~~~~~Y~asKaal~~l~~~  155 (235)
T d1ooea_         137 --------PSMIGYGMAKAAVHHLTSS  155 (235)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHH
T ss_pred             --------ccccchHHHHHHHHHHHHH
Confidence                    8999999999999999874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=1.8e-28  Score=203.29  Aligned_cols=158  Identities=23%  Similarity=0.282  Sum_probs=138.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChH---HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLK---AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ++++|||||++|||+++|++|+++|+ +|++++|+..   ..++..+++.+      .+.++.++.||++|.++++++++
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~------~g~~v~~~~~Dv~d~~~~~~~~~   82 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA------LGARTTVAACDVTDRESVRELLG   82 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH------TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh------ccccccccccccchHHHHHHhhc
Confidence            47999999999999999999999999 6999999753   45555555544      12589999999999999999999


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      ++.+. +++|.+|||+|.....++.+.+.+++++++++|+.+++++.+.+    .+.+.++||++||+++..+.      
T Consensus        83 ~i~~~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~------  151 (259)
T d2fr1a1          83 GIGDD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGA------  151 (259)
T ss_dssp             TSCTT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCC------
T ss_pred             ccccc-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCC------
Confidence            87664 68999999999999999999999999999999999999988864    44567899999999999998      


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ++++.|+++|+++++|+++
T Consensus       152 ---------~~~~~YaAaka~l~~la~~  170 (259)
T d2fr1a1         152 ---------PGLGGYAPGNAYLDGLAQQ  170 (259)
T ss_dssp             ---------TTCTTTHHHHHHHHHHHHH
T ss_pred             ---------cccHHHHHHHHhHHHHHHH
Confidence                     8999999999999999864

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=1e-27  Score=205.43  Aligned_cols=167  Identities=13%  Similarity=0.167  Sum_probs=134.1

Q ss_pred             CCEEEEeC--CCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCC-----C-CCCceEEE-----------
Q 025705           65 DLTCIVTG--STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK-----G-LPLNIEAM-----------  125 (249)
Q Consensus        65 ~~~vlItG--as~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~-----~-~~~~v~~~-----------  125 (249)
                      +|++||||  +++|||+++|+.|+++|++|++.+++............+.....     . ........           
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            69999999  56899999999999999999999998776555444333221110     0 00011122           


Q ss_pred             ---------EccCCCHHHHHHHHHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhh
Q 025705          126 ---------ELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSL  194 (249)
Q Consensus       126 ---------~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m  194 (249)
                               .+|+++.++++++++++.+.+|+||+||||||...  .+++.+.+.++|++.+++|+.+.+.++|+++|+|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                     24677888899999999999999999999999764  3578899999999999999999999999999999


Q ss_pred             hcCCCCeEEEEcCCccccCCCCccccccccccccCCC-cccchhhHHHHHhhhhc
Q 025705          195 IRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTS-LMGYSGSKLAQVKLETK  248 (249)
Q Consensus       195 ~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~asKaal~~l~~~  248 (249)
                      .+  .|+||++||.++..+.               |+ ...|++||+|+++|+|.
T Consensus       162 ~~--~GsIv~iss~~~~~~~---------------p~y~~~y~asKaal~~ltr~  199 (329)
T d1uh5a_         162 KP--QSSIISLTYHASQKVV---------------PGYGGGMSSAKAALESDTRV  199 (329)
T ss_dssp             EE--EEEEEEEECGGGTSCC---------------TTCTTTHHHHHHHHHHHHHH
T ss_pred             cc--ccccccceeehhcccc---------------cccchhhhhhhccccccchh
Confidence            65  4899999999988876               55 45799999999999984

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=6.5e-26  Score=187.49  Aligned_cols=163  Identities=12%  Similarity=0.109  Sum_probs=138.5

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++||++|||||++  |||+++|+.|+++|++|++++|+++..+. .+++....      .+...+.+|+++.+++.+.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~   74 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGR-VEEFAAQL------GSDIVLQCDVAEDASIDTMF   74 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHH-HHHHHHHT------TCCCEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHhhc------CCcceeecccchHHHHHHHH
Confidence            37899999999998  89999999999999999999999654443 34444421      35677889999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCCCC-----CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEP-----QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      +++.+.++++|++|||++......+     .....+.+...+++|+.+.+.+++.+.|.|.++  +.||++||..+..+.
T Consensus        75 ~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~~~~~  152 (258)
T d1qsga_          75 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAERAI  152 (258)
T ss_dssp             HHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSBC
T ss_pred             HHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhhccCC
Confidence            9999999999999999997643332     345678899999999999999999999998654  589999999888877


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     |.+..|++||+|+++|+|+
T Consensus       153 ---------------~~~~~Y~~sKaal~~ltr~  171 (258)
T d1qsga_         153 ---------------PNYNVMGLAKASLEANVRY  171 (258)
T ss_dssp             ---------------TTTTHHHHHHHHHHHHHHH
T ss_pred             ---------------CCcHHHHHHHHHHHHHHHH
Confidence                           8889999999999999985

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.93  E-value=1.1e-25  Score=189.60  Aligned_cols=172  Identities=16%  Similarity=0.128  Sum_probs=129.7

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcC-----CCCCCc-eEEEEcc----
Q 025705           61 PPVNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSG-----KGLPLN-IEAMELD----  128 (249)
Q Consensus        61 ~~~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-----~~~~~~-v~~~~~D----  128 (249)
                      .+++||++|||||++  |||+++|++|+++|++|++.+|++................     ...... -....+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            468999999999876  9999999999999999999999865443333222211100     000001 1222233    


Q ss_pred             ----------------CCCHHHHHHHHHHHhccCCCccEEEeccccCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHh
Q 025705          129 ----------------LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFS--IGEPQKFSKDGYEEHMQVNHLAPALLSILL  190 (249)
Q Consensus       129 ----------------~~~~~~v~~~~~~~~~~~g~id~linnag~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~  190 (249)
                                      .++.+.++++++++.+++|+||+||||||...  ..++.+.+.++|++.+++|+.+++.+++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                            34556678899999999999999999999753  457889999999999999999999999999


Q ss_pred             chhhhcCCCCeEEEEcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          191 FPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       191 l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +|.|.++  |.++++++........              +....|+++|+++.++++.
T Consensus       164 ~~~~~~~--g~~~~~~~~~~~~~~~--------------~~~~~y~~aKaa~~~l~~~  205 (297)
T d1d7oa_         164 LPIMNPG--GASISLTYIASERIIP--------------GYGGGMSSAKAALESDTRV  205 (297)
T ss_dssp             GGGEEEE--EEEEEEECGGGTSCCT--------------TCTTTHHHHHHHHHHHHHH
T ss_pred             HHHhhcC--Ccceeeeehhhccccc--------------ccccceecccccccccccc
Confidence            9998775  5677777766554331              6777899999999999874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=1.5e-25  Score=183.12  Aligned_cols=150  Identities=24%  Similarity=0.280  Sum_probs=128.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|++|||||++|||+++|++|+++|++|++++|+++.                  .+....++|+++......+.++..+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------------~~~~~~~~d~~~~~~~~~~~~~~~~   62 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------------EDLIYVEGDVTREEDVRRAVARAQE   62 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------------SSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------------ccceEeeccccchhhhHHHHHhhhc
Confidence            5899999999999999999999999999999998542                  2567789999999999998888777


Q ss_pred             cCCCccEEEeccccCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchh------hhcCCCCeEEEEcCCccccCC
Q 025705          145 RLGPLHVLINNAGIFS----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPS------LIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       145 ~~g~id~linnag~~~----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~------m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                      .. ..+.++++++...    .......+.+.+++++++|+.+++.+++.+.+.      |.+++.|+|||+||..+..+.
T Consensus        63 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  141 (241)
T d1uaya_          63 EA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ  141 (241)
T ss_dssp             HS-CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC
T ss_pred             cc-cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC
Confidence            65 4555666666433    234456788999999999999999999999988      566678999999999999888


Q ss_pred             CCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          215 VDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                     ++...|++||+|+.+|+|.
T Consensus       142 ---------------~~~~~Y~asKaal~~lt~~  160 (241)
T d1uaya_         142 ---------------IGQAAYAASKGGVVALTLP  160 (241)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCchhhHHHHHHHHHHHHH
Confidence                           8999999999999999984

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.92  E-value=1.8e-24  Score=179.24  Aligned_cols=163  Identities=21%  Similarity=0.201  Sum_probs=131.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-HHHHHHHHHHhhcCCCCCCceEEEEccCC----CHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-ANELIQKWQEEWSGKGLPLNIEAMELDLL----SLDSVVRFSE  140 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~----~~~~v~~~~~  140 (249)
                      -++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+...     .++....+|+.    ..+.++++++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~   76 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-----GSAVLCKGDLSLSSSLLDCCEDIID   76 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-----TCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcC-----CceEEEecccccchhHHHHHHHHHH
Confidence            379999999999999999999999999999998654 5667777777543     35566665554    3677888888


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCC-----------CCHHHHHHHHHhhhhHHHHHHHHhchhhhc-----CCCCeEEE
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQK-----------FSKDGYEEHMQVNHLAPALLSILLFPSLIR-----GSPSRIIN  204 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~-----------~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~-----~~~g~Iv~  204 (249)
                      ++.+++|++|+||||||+..+.++.+           ...+.+...+.+|+.+.+...+...+.+..     ...+.+++
T Consensus        77 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (266)
T d1mxha_          77 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  156 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             HHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchh
Confidence            89999999999999999876554432           234567788899999999999988887764     24578889


Q ss_pred             EcCCccccCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          205 VNSVMHYVGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       205 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ++|..+..+.               |++..|++||+|+++|+|.
T Consensus       157 ~~~~~~~~~~---------------~~~~~Y~asKaal~~lt~~  185 (266)
T d1mxha_         157 LCDAMTDLPL---------------PGFCVYTMAKHALGGLTRA  185 (266)
T ss_dssp             ECCGGGGSCC---------------TTCHHHHHHHHHHHHHHHH
T ss_pred             hhhccccccC---------------cchhhhhhhHHHHhhhHHH
Confidence            9998888777               8999999999999999985

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.91  E-value=3e-24  Score=178.16  Aligned_cols=161  Identities=15%  Similarity=0.130  Sum_probs=130.5

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGS--TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGa--s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++||++|||||  ++|||+++|++|+++|++|++++|+.+++.+   ++.++.     +.+...++||+++.++++.++
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-----~~~~~~~~~dv~~~~~~~~~~   74 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-----PAKAPLLELDVQNEEHLASLA   74 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-----SSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-----CCceeeEeeeccccccccccc
Confidence            478999999994  5799999999999999999999999876533   333322     246778899999999999998


Q ss_pred             HHHhcc---CCCccEEEeccccCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccc
Q 025705          140 EAWNGR---LGPLHVLINNAGIFS-----IGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHY  211 (249)
Q Consensus       140 ~~~~~~---~g~id~linnag~~~-----~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~  211 (249)
                      +.+.+.   ++.+|++|||+|...     ..++.+.+.+++.+.+++|..+.+...+.+.+.+.+   +.+++++|....
T Consensus        75 ~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~  151 (268)
T d2h7ma1          75 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS  151 (268)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS
T ss_pred             chhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---cccccccccccc
Confidence            888765   467999999999753     234567888999999999999999999998887644   345566666655


Q ss_pred             cCCCCccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          212 VGFVDTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+.               |....|+++|+|+.+|+|+
T Consensus       152 ~~~---------------p~~~~y~~sK~a~~~ltr~  173 (268)
T d2h7ma1         152 RAM---------------PAYNWMTVAKSALESVNRF  173 (268)
T ss_dssp             SCC---------------TTTHHHHHHHHHHHHHHHH
T ss_pred             ccC---------------cccchhhccccchhhcccc
Confidence            555               8889999999999999984

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.91  E-value=4.3e-24  Score=177.91  Aligned_cols=163  Identities=14%  Similarity=0.123  Sum_probs=125.7

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTS--GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~--gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++||++|||||+|  |||+++|++|+++|++|++++|++ ++++.++++.+..      ....++.+|+++.+++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~------~~~~~~~~d~~~~~~~~~~~   74 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQEL------NSPYVYELDVSKEEHFKSLY   74 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHT------TCCCEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhC------CceeEeeecccchhhHHHHH
Confidence            37899999999765  999999999999999999999985 4555666666643      24567899999999999999


Q ss_pred             HHHhccCCCccEEEeccccCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIG----EPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFV  215 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~  215 (249)
                      +++.+.+|++|++|||+|.....    ...+...+.+...+.++..+.+...+...+.+..  .+.|+++|+.+...+. 
T Consensus        75 ~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~~~~~~~~-  151 (274)
T d2pd4a1          75 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYM-  151 (274)
T ss_dssp             HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBC-
T ss_pred             HHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc--Ccceeeeccccccccc-
Confidence            99999999999999999976432    2233445556666666666666666666655433  2456666666656555 


Q ss_pred             CccccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          216 DTEDMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                    +....|+++|+|+.+|+|+
T Consensus       152 --------------~~~~~y~asK~al~~ltr~  170 (274)
T d2pd4a1         152 --------------AHYNVMGLAKAALESAVRY  170 (274)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHH
T ss_pred             --------------ccchhhhHHHHHHHHHHHh
Confidence                          7788899999999999984

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.86  E-value=7.6e-23  Score=161.79  Aligned_cols=156  Identities=14%  Similarity=0.086  Sum_probs=119.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..+++||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+..       ++....+|+++.+++++++
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~d~~~~~~~~~~~   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-------KVNVTAAETADDASRAEAV   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-------TCCCEEEECCSHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-------chhhhhhhcccHHHHHHHh
Confidence            357999999999999999999999999999999999999999999998888753       4556789999999887654


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                             +++|+||||||..    +...+.|.|+..+++|+.+.++....+.+.+.... .....+++.......     
T Consensus        91 -------~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~-----  153 (191)
T d1luaa1          91 -------KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGAL-----  153 (191)
T ss_dssp             -------TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHH-----
T ss_pred             -------cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEecc-----
Confidence                   5799999999963    45678999999999999888776655544443322 122333332222111     


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               ..+...|+++|+++.+|.+.
T Consensus       154 ---------~~g~~~y~~sk~a~~~l~~s  173 (191)
T d1luaa1         154 ---------GIGGLKLKLHRACIAKLFES  173 (191)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHTSC
T ss_pred             ---------CcCcHHHHHHHHHHHHHHhc
Confidence                     02345699999999988754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.80  E-value=2e-19  Score=147.79  Aligned_cols=153  Identities=18%  Similarity=0.166  Sum_probs=113.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc-
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG-  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~-  144 (249)
                      |+||||||++|||+++|++|+++|++|++++|+.++                       ..+|+.+.+..+....+... 
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------------~~~d~~~~~~~~~~~~~~~~~   58 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------------VIADLSTAEGRKQAIADVLAK   58 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------------EECCTTSHHHHHHHHHHHHTT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------------HHHHhcCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999997421                       25799999888877655554 


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc-cc--
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED-MN--  221 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~-~~--  221 (249)
                      ..+.+|++|||||+..       ..+.+....++|..+...+.+...+.+.+...+.+.++++.....-...... ..  
T Consensus        59 ~~~~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (257)
T d1fjha_          59 CSKGMDGLVLCAGLGP-------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             CTTCCSEEEECCCCCT-------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             hCCCCcEEEEcCCCCC-------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhc
Confidence            4457999999999753       2345778899999999999999999998877778888777544332110000 00  


Q ss_pred             ----------cccccccCCCcccchhhHHHHHhhhhc
Q 025705          222 ----------VVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       222 ----------~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                                ........++..+|++||+|+++|+|+
T Consensus       132 ~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~  168 (257)
T d1fjha_         132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRK  168 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccc
Confidence                      000011223456799999999999985

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=2e-17  Score=142.06  Aligned_cols=167  Identities=16%  Similarity=0.106  Sum_probs=114.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH-HHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN-ELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      |+||||||+|.||.+++++|+++|++|+.++|...... ...+++......  ...++.++.+|++|.+++++.+++.  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh--cCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            88999999999999999999999999999998643211 111122111111  1247899999999999999998875  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         .+|+++|+|+......    +.++.+..+++|+.|+.++..++...-.+ +..++|++||.+.+ |.+...+.   +
T Consensus        78 ---~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~~~-~~~r~i~~SS~~vY-G~~~~~~~---~  145 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELY-GLVQEIPQ---K  145 (357)
T ss_dssp             ---CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGG-TTCCSSSB---C
T ss_pred             ---CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEEchhhh-CCCCCCCc---C
Confidence               6899999999864322    33556678899999999999887554322 23579999997644 33222222   2


Q ss_pred             ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 ~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      +..+..+...|+.||.+.+.+++.
T Consensus       146 E~~~~~P~~~Y~~sK~~~E~~~~~  169 (357)
T d1db3a_         146 ETTPFYPRSPYAVAKLYAYWITVN  169 (357)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHH
Confidence            333345567899999999987753

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=5.3e-17  Score=138.65  Aligned_cols=161  Identities=19%  Similarity=0.174  Sum_probs=117.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH---HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA---ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      |+||||||+|-||.+++++|+++|++|+++++....   .....+....        .++.++.+|++|.+.++.+++..
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~--------~~v~~~~~Dl~d~~~l~~~~~~~   73 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--------HHIPFYEVDLCDRKGLEKVFKEY   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT--------SCCCEEECCTTCHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcc--------cCCeEEEeecCCHHHHHHHHhcc
Confidence            789999999999999999999999999998763221   1111122211        36788999999999999988753


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                           ++|++||+|+.....    ...+.......+|+.++..+.+++...    +--++|++||...+......++...
T Consensus        74 -----~~d~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~~----~i~~~i~~SS~~vyg~~~~~~~~~~  140 (347)
T d1z45a2          74 -----KIDSVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATVYGDATRFPNMIP  140 (347)
T ss_dssp             -----CCCEEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred             -----CCCEEEEcccccccc----ccccCcccccccchhhhHHHHHHHHhc----ccceEEeecceeeecCcccCCCCCc
Confidence                 699999999965311    123444677889999999999987543    3348999999887765544333333


Q ss_pred             ccccccCCCcccchhhHHHHHhhhh
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+..+..+...|+.||.+.+.+++
T Consensus       141 ~~e~~~~~p~~~Y~~sK~~~E~~~~  165 (347)
T d1z45a2         141 IPEECPLGPTNPYGHTKYAIENILN  165 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCChhHhHHHHHHHHHH
Confidence            3444455567789999999988764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=1.1e-15  Score=129.95  Aligned_cols=157  Identities=18%  Similarity=0.104  Sum_probs=114.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH---HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK---AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+|||||+|-||.+++++|+++|++|++++|...   ......+....        .++.++++|++|.+.+.++++.. 
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~--------~~~~~~~~Dl~d~~~l~~~~~~~-   72 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--------KHPTFVEGDIRNEALMTEILHDH-   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT--------SCCEEEECCTTCHHHHHHHHHHT-
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcC--------CCCEEEEeecCCHHHHHHHHhcc-
Confidence            3899999999999999999999999999986322   12222222222        36889999999999998888863 


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          ++|++||+|+....    ..+.++.++.+++|+.|+..+.+++...    +-.++|++||.+.+.+...... .  
T Consensus        73 ----~~d~ViHlAa~~~~----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~-~--  137 (338)
T d1udca_          73 ----AIDTVIHFAGLKAV----GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPY-V--  137 (338)
T ss_dssp             ----TCSEEEECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSB-C--
T ss_pred             ----CCCEEEECCCccch----hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEcccccccc-c--
Confidence                69999999996421    1233455688999999999999887554    3348999999876654432221 1  


Q ss_pred             cccccCCCcccchhhHHHHHhhhh
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      .......+...|+.+|.+.+.+++
T Consensus       138 e~~~~~~p~~~Y~~sK~~~e~~~~  161 (338)
T d1udca_         138 ESFPTGTPQSPYGKSKLMVEQILT  161 (338)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHH
T ss_pred             cccccCCCcchHHHHHhhhhHHHH
Confidence            112233567789999999988775

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=3.2e-15  Score=129.41  Aligned_cols=168  Identities=10%  Similarity=0.032  Sum_probs=112.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH----------------HHHHHHHHHHHhhcCCCCCCceEEEEcc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK----------------AANELIQKWQEEWSGKGLPLNIEAMELD  128 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~----------------~~~~~~~~~~~~~~~~~~~~~v~~~~~D  128 (249)
                      |+.||||||+|-||.+++++|+++|++|+++|.-..                ...+.........     ..++.++.+|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~D   75 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-----GKSIELYVGD   75 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-----CCCCEEEESC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-----CCCcEEEEcc
Confidence            688999999999999999999999999999872110                1111112222211     1368899999


Q ss_pred             CCCHHHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCC
Q 025705          129 LLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSV  208 (249)
Q Consensus       129 ~~~~~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~  208 (249)
                      ++|.+.++++++..     ++|++||.|+.... +....+.+.....+++|+.|+..+..++...-.   ...+++.||.
T Consensus        76 l~d~~~l~~~~~~~-----~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~---~~~~i~~ss~  146 (393)
T d1i24a_          76 ICDFEFLAESFKSF-----EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE---ECHLVKLGTM  146 (393)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEECCG
T ss_pred             CCCHHHHHHHHHhh-----cchheecccccccc-ccccccccccccccccccccccHHHHHHHHhcc---ccceeecccc
Confidence            99999999998875     79999999986431 122345667778899999999999988754322   2356666665


Q ss_pred             ccccCCCCccc----------cccccccccCCCcccchhhHHHHHhhhh
Q 025705          209 MHYVGFVDTED----------MNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       209 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+... ..+.          ....+...+..+...|+.||.+.+.+++
T Consensus       147 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~  194 (393)
T d1i24a_         147 GEYGTP-NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIA  194 (393)
T ss_dssp             GGGCCC-SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHH
T ss_pred             cccccc-ccccccccccccccccccccccccccccHHHHHhhhhccccc
Confidence            544322 1110          0001112234556679999999988764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.8e-15  Score=128.56  Aligned_cols=163  Identities=18%  Similarity=0.114  Sum_probs=113.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH-----HHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA-----ANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      |++|||||+|.||.+++++|.++|++|+.++|....     ++........     ....++.++.+|++|.+.+.++++
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~   76 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-----HIEGNMKLHYGDLTDSTCLVKIIN   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC--------------CEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-----hccCCcEEEEeecCCchhhHHHHh
Confidence            445999999999999999999999999999985421     1111111111     111368999999999999999988


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                      +.     .++++++.++....    ....+.....+++|+.|+.++..++..+-.. +..++|++||.+.+ |.+...++
T Consensus        77 ~~-----~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vy-g~~~~~~~  145 (347)
T d1t2aa_          77 EV-----KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELY-GKVQEIPQ  145 (347)
T ss_dssp             HH-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGT-CSCSSSSB
T ss_pred             hc-----ccceeeeeeecccc----chhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchhee-cCCCCCCC
Confidence            75     68888988886431    1233455667899999999999887655332 23489999987654 33222222


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhh
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                         ++..+..+...|+.||.+.+.+++
T Consensus       146 ---~E~~~~~P~~~Yg~sK~~aE~~~~  169 (347)
T d1t2aa_         146 ---KETTPFYPRSPYGAAKLYAYWIVV  169 (347)
T ss_dssp             ---CTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCCCCHHHHHHHHHHHHHH
Confidence               333445567789999999998875

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.58  E-value=8.6e-15  Score=124.58  Aligned_cols=164  Identities=16%  Similarity=0.102  Sum_probs=111.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+||+||||||+|.||.+++++|+++|++|+.+.|+..+.............    ......+..|++|.+.+.+++.  
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~--   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP----GRFETAVVEDMLKQGAYDEVIK--   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST----TTEEEEECSCTTSTTTTTTTTT--
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcccc----ccccEEEeccccchhhhhhhcc--
Confidence            4589999999999999999999999999999999998776555443322211    1244556789999887665442  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc-
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN-  221 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~-  221 (249)
                           .+|+++|+++....    .   ......+..|+.|+.++.+++...   .+-.++|++||+.+..+..+..+-- 
T Consensus        83 -----~~~~v~~~a~~~~~----~---~~~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~  147 (342)
T d1y1pa1          83 -----GAAGVAHIASVVSF----S---NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             -----TCSEEEECCCCCSC----C---SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             -----cchhhhhhcccccc----c---ccccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCcc
Confidence                 68999999986431    1   123456778999999888886443   2346899999986654322111000 


Q ss_pred             ---------------cccccccCCCcccchhhHHHHHhhhh
Q 025705          222 ---------------VVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       222 ---------------~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                                     ...+..+..+...|+.||.+.+.+++
T Consensus       148 ~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~  188 (342)
T d1y1pa1         148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW  188 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccCCCCCcCcccchhHhHHHHHH
Confidence                           01122233445679999999887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=1.1e-14  Score=123.20  Aligned_cols=163  Identities=16%  Similarity=0.055  Sum_probs=112.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH-----HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK-----AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      |++|||||+|.||.+++++|+++|++|+.++|...     +..........     .....+.++.+|+++.+.+.+.++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Di~~~~~~~~~~~   76 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-----VNKALMKLHYADLTDASSLRRWID   76 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-------------CCEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh-----ccccceEEEEccccCHHHHHHHHh
Confidence            88999999999999999999999999999998532     11111111111     011468899999999999999888


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcCCccccCCCCccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ..     ++|++||+|+....    ....+.....++.|..+...+..++.....+.. ..++++.||... .+.. .  
T Consensus        77 ~~-----~~D~Vih~Aa~~~~----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~-~~~~-~--  143 (339)
T d1n7ha_          77 VI-----KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEM-FGST-P--  143 (339)
T ss_dssp             HH-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG-GTTS-C--
T ss_pred             hh-----ccchhhhccccccc----cccccCccccccccccccchhhhhhhhcccccccceeeeeccccee-cccC-C--
Confidence            64     79999999997431    113345667889999999999888866554432 234555555433 2221 1  


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhh
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                       ...++..+..+...|+.+|.+.+.+++
T Consensus       144 -~~~~E~~~~~p~~~Y~~sK~~~E~~~~  170 (339)
T d1n7ha_         144 -PPQSETTPFHPRSPYAASKCAAHWYTV  170 (339)
T ss_dssp             -SSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCCCCCcchhhHHHHHHHHHHH
Confidence             123344455678899999999998865

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.57  E-value=7.1e-15  Score=126.20  Aligned_cols=167  Identities=14%  Similarity=0.150  Sum_probs=115.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEE-EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil-~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      .||||||+|.||.+++++|++.|++|++ +++..... . .+.+..    .....++.++.+|++|.+.+.++++..   
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-~-~~~~~~----~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-N-LESLSD----ISESNRYNFEHADICDSAEITRIFEQY---   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-C-GGGGTT----TTTCTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-c-HHHHHh----hhhcCCcEEEEccCCCHHHHHHHHHhC---
Confidence            4899999999999999999999997554 55421110 0 011111    111247899999999999999988764   


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-----CCCeEEEEcCCccccCCCCccc-
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-----SPSRIINVNSVMHYVGFVDTED-  219 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-----~~g~Iv~vsS~~~~~~~~~~~~-  219 (249)
                        .+|++||+|+....    ..+.++....+++|+.|+..+.+++.......     +..++|++||.+.+......+. 
T Consensus        73 --~~d~VihlAa~~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  146 (361)
T d1kewa_          73 --QPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEV  146 (361)
T ss_dssp             --CCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS
T ss_pred             --CCCEEEECccccch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcc
Confidence              69999999986431    12234456789999999999999987765432     2358999999876654322111 


Q ss_pred             -----cccccccccCCCcccchhhHHHHHhhhhc
Q 025705          220 -----MNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       220 -----~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                           .....+.....+...|+.||.+.+.+++.
T Consensus       147 ~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~  180 (361)
T d1kewa_         147 ENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA  180 (361)
T ss_dssp             CTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHH
Confidence                 01122334445677899999999988763

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.55  E-value=2.9e-14  Score=119.74  Aligned_cols=161  Identities=19%  Similarity=0.115  Sum_probs=112.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+||||||+|.||++++++|+++|++|+.++|......  ...+...    ....++.++.+|++|.+.+.+.+...   
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~---   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLREL----GIEGDIQYEDGDMADACSVQRAVIKA---   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHT----TCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHh----cccCCcEEEEccccChHHhhhhhccc---
Confidence            68999999999999999999999999999998653211  1111111    11147899999999999999888875   


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        ..++++++|+.....    ...+.....++.|+.++..+..++..+-.+   .++++.|| ..+.+......   .++
T Consensus        72 --~~~~~~~~a~~~~~~----~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~---~~~i~~Ss-~~~~~~~~~~~---~~E  138 (321)
T d1rpna_          72 --QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQFSPE---TRFYQAST-SEMFGLIQAER---QDE  138 (321)
T ss_dssp             --CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHHCTT---SEEEEEEE-GGGGCSCSSSS---BCT
T ss_pred             --ccccccccccccccc----ccccchHHHHhhhhhchHHHHHHHHHhCCC---cccccccc-hhhcCcccCCC---CCC
Confidence              678888887754311    122345778899999999998887543222   25555555 44555433322   234


Q ss_pred             cccCCCcccchhhHHHHHhhhhc
Q 025705          226 RRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ..+..+...|+.+|.+.+.+.++
T Consensus       139 ~~~~~p~~~Y~~sK~~~E~~~~~  161 (321)
T d1rpna_         139 NTPFYPRSPYGVAKLYGHWITVN  161 (321)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCccccChhHHHHHHHHHHHHH
Confidence            44556778899999999988753

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.54  E-value=2.4e-14  Score=121.87  Aligned_cols=163  Identities=14%  Similarity=0.044  Sum_probs=113.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++||.||||||+|.||.+++++|+++|++|+.++|+..+.....+...       ....+.++.+|++|.+.+.++++..
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-------~~~~i~~~~~Dl~d~~~l~~~~~~~   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-------VADGMQSEIGDIRDQNKLLESIREF   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-------TTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-------cccCCeEEEeeccChHhhhhhhhhc
Confidence            467999999999999999999999999999999998765433322211       1136889999999999998888764


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNV  222 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~  222 (249)
                           .+|+++|.|+...    ...+.+..+..+++|+.++..+.+++...   .....+++.|+. ..........  .
T Consensus        79 -----~~~~v~~~aa~~~----~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~-~~~~~~~~~~--~  143 (356)
T d1rkxa_          79 -----QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSD-KCYDNKEWIW--G  143 (356)
T ss_dssp             -----CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCG-GGBCCCCSSS--C
T ss_pred             -----hhhhhhhhhcccc----ccccccCCccccccccccchhhhhhhhcc---cccccccccccc-cccccccccc--c
Confidence                 7899999998642    12234556778899999999988887543   122344444444 3333222211  1


Q ss_pred             ccccccCCCcccchhhHHHHHhhhh
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+.....+...|+.+|.+.+.+++
T Consensus       144 ~~~~~~~~p~~~y~~~k~~~e~~~~  168 (356)
T d1rkxa_         144 YRENEAMGGYDPYSNSKGCAELVTS  168 (356)
T ss_dssp             BCTTSCBCCSSHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCccccccccchhhhh
Confidence            1222334556789999988876654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.54  E-value=6.6e-14  Score=117.82  Aligned_cols=161  Identities=16%  Similarity=0.076  Sum_probs=111.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh-HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNL-KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      .||||||+|.||.+++++|+++|++|+++++-. ....+....+..       ..++.++.+|++|.+.+.++++..   
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-------~~~~~~i~~Di~~~~~l~~~~~~~---   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-------LGNFEFVHGDIRNKNDVTRLITKY---   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-------cCCcEEEEcccCCHHHHHHHHHhc---
Confidence            489999999999999999999999999987421 111122222222       136889999999999999988875   


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc-----
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM-----  220 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~-----  220 (249)
                        ++|++||+|+....    ....++.+..+++|+.|+.++.+++...    +..+.++.||.....+.....+.     
T Consensus        72 --~~d~Vih~aa~~~~----~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~  141 (338)
T d1orra_          72 --MPDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETET  141 (338)
T ss_dssp             --CCSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSS
T ss_pred             --CCceEEeecccccc----cccccChHHHHHHHHHHHHHHHHhhhcc----cccccccccccccccccccccccccccc
Confidence              68999999987532    1123455788999999999999876543    33456666666655554322111     


Q ss_pred             --------ccccccccCCCcccchhhHHHHHhhhh
Q 025705          221 --------NVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 --------~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                              ..........+...|+.+|...+.+..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~  176 (338)
T d1orra_         142 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYML  176 (338)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccccCcccCCccccccccccccchhhhhhh
Confidence                    112233444567889999998877643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.1e-14  Score=111.89  Aligned_cols=139  Identities=14%  Similarity=0.079  Sum_probs=96.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ..|.++||||+|+||.+++++|+++|++|.++.|+++++...            ....+.++.+|++|.+++.++++   
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------------~~~~~~~~~gD~~d~~~l~~al~---   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------------GPRPAHVVVGDVLQAADVDKTVA---   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------------SCCCSEEEESCTTSHHHHHHHHT---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------------cccccccccccccchhhHHHHhc---
Confidence            347899999999999999999999999999999998764322            11357889999999998877654   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                          +.|++|+++|........           +++..++..+    ++.+++.+-.++|++||........        
T Consensus        67 ----~~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l----~~aa~~~~v~r~i~~ss~~~~~~~~--------  119 (205)
T d1hdoa_          67 ----GQDAVIVLLGTRNDLSPT-----------TVMSEGARNI----VAAMKAHGVDKVVACTSAFLLWDPT--------  119 (205)
T ss_dssp             ----TCSEEEECCCCTTCCSCC-----------CHHHHHHHHH----HHHHHHHTCCEEEEECCGGGTSCTT--------
T ss_pred             ----CCCEEEEEeccCCchhhh-----------hhhHHHHHHH----HHHHHhcCCCeEEEEeeeeccCCCc--------
Confidence                579999999974322211           1222333333    3445666667999999976544331        


Q ss_pred             cccccCCCcccchhhHHHHHhhhh
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                         ...+....|...|.+.+.+.+
T Consensus       120 ---~~~~~~~~~~~~~~~~e~~l~  140 (205)
T d1hdoa_         120 ---KVPPRLQAVTDDHIRMHKVLR  140 (205)
T ss_dssp             ---CSCGGGHHHHHHHHHHHHHHH
T ss_pred             ---cccccccccchHHHHHHHHHH
Confidence               111344467777777766654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.3e-13  Score=116.99  Aligned_cols=161  Identities=19%  Similarity=0.129  Sum_probs=111.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEc------ChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVR------NLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      |.||||||+|-||.+++++|+++|++|+.+++      +.....+..+.+... ..    .++.++.+|++|.+.+++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~Dl~d~~~l~~~~   77 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TG----RSVEFEEMDILDQGALQRLF   77 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HT----CCCEEEECCTTCHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cC----CCcEEEEeeccccccccccc
Confidence            78899999999999999999999999999874      111111112222221 11    37899999999999998887


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED  219 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~  219 (249)
                      ..     ..+++++|.|+....    ..+.+.....+++|+.++..+.+++.    +.+-.+++++||...+........
T Consensus        78 ~~-----~~~~~i~h~Aa~~~~----~~~~~~p~~~~~~Nv~gt~~l~~~~~----~~~v~~~i~~ss~~~~~~~~~~~~  144 (346)
T d1ek6a_          78 KK-----YSFMAVIHFAGLKAV----GESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPL  144 (346)
T ss_dssp             HH-----CCEEEEEECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             cc-----cccccccccccccCc----HhhHhCHHHHHHhhhcccccccchhh----hcCcccccccccceeeeccccccc
Confidence            76     368999999997532    12234456778999999999888863    334458999988776655422211


Q ss_pred             cccccccccCCCcccchhhHHHHHhhhh
Q 025705          220 MNVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      .   .......+...|+.+|.+.+...+
T Consensus       145 ~---~~~~~~~~~~~Y~~~k~~~e~~~~  169 (346)
T d1ek6a_         145 D---EAHPTGGCTNPYGKSKFFIEEMIR  169 (346)
T ss_dssp             C---TTSCCCCCSSHHHHHHHHHHHHHH
T ss_pred             c---ccccccccCChHHHHHHHHHHHHH
Confidence            1   111222455679999999886654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.51  E-value=7e-14  Score=118.60  Aligned_cols=162  Identities=14%  Similarity=0.027  Sum_probs=111.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |++|||||+|.||.+++++|.++|++|+.++|....-....+.+....... ...++.++.+|..|........      
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~d~~~~~~~~------   89 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-QWSNFKFIQGDIRNLDDCNNAC------   89 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH-HHTTEEEEECCTTSHHHHHHHH------
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc-ccCCeeEEeecccccccccccc------
Confidence            899999999999999999999999999999863221111111111111000 0136889999999988665432      


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                       ...+.+++.++....    ....++....+++|+.|+..+.+++..    .+..++|++||...+...... +   .++
T Consensus        90 -~~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~-~---~~E  156 (341)
T d1sb8a_          90 -AGVDYVLHQAALGSV----PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGL-P---KVE  156 (341)
T ss_dssp             -TTCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCS-S---BCT
T ss_pred             -ccccccccccccccc----cccccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCC-C---ccC
Confidence             257888888775321    124566778899999999999988744    344589999998866543221 1   233


Q ss_pred             cccCCCcccchhhHHHHHhhhh
Q 025705          226 RRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+..+...|+.||.+.+.+++
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~  178 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYAD  178 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcchHHHHHHHHHHH
Confidence            3445567889999999998875

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=1.1e-13  Score=115.76  Aligned_cols=145  Identities=16%  Similarity=0.136  Sum_probs=104.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .|.||||||+|.||.+++++|+++|+.++++++..                          .+|+.+.+.++++++.-  
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------------~~~~~~~~~~~~~~~~~--   53 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------------ELNLLDSRAVHDFFASE--   53 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------------TCCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------------hccccCHHHHHHHHhhc--
Confidence            36799999999999999999999999888765431                          25899999998887653  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccc
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVS  224 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~  224 (249)
                         .+|.++|+|+....   .........+.++.|+.++..+.+++...    +-.++|++||.+.+.+... .+.++..
T Consensus        54 ---~~d~v~~~a~~~~~---~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vyg~~~~-~~~~E~~  122 (315)
T d1e6ua_          54 ---RIDQVYLAAAKVGG---IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAK-QPMAESE  122 (315)
T ss_dssp             ---CCSEEEECCCCCCC---HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCC-SSBCGGG
T ss_pred             ---CCCEEEEcchhccc---cccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEcCCCCC-CCccCCc
Confidence               68999999876431   11123445667889999999998886443    3458999999887754322 2222211


Q ss_pred             --ccccCCCcccchhhHHHHHhhhhc
Q 025705          225 --GRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       225 --~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                        +....++...|+.||.+.+.++++
T Consensus       123 ~~~~~~~~~~~~Y~~sK~~~E~~~~~  148 (315)
T d1e6ua_         123 LLQGTLEPTNEPYAIAKIAGIKLCES  148 (315)
T ss_dssp             TTSSCCCGGGHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHH
Confidence              123334556799999999988753

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.46  E-value=1.8e-13  Score=115.93  Aligned_cols=156  Identities=12%  Similarity=-0.018  Sum_probs=107.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      .+|||||+|.||.+++++|+++|. +|+.+++.........           ...++.++.+|+++.+++.+.+.+    
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----------~~~~~~~i~~Di~~~~~~~~~~~~----   66 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----------NHPHFHFVEGDISIHSEWIEYHVK----   66 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----------TCTTEEEEECCTTTCSHHHHHHHH----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----------cCCCeEEEECccCChHHHHHHHHh----
Confidence            489999999999999999999994 8999888654322221           114789999999988776554332    


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc---cc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM---NV  222 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~---~~  222 (249)
                        ++|++||+|+.....    ...+.....+++|+.++..+.+++...    + -+.+++||...+.+......-   ..
T Consensus        67 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~~~~----~-~~~~~~ss~~~~~~~~~~~~~~~~~~  135 (342)
T d2blla1          67 --KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVYGMCSDKYFDEDHSN  135 (342)
T ss_dssp             --HCSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred             --CCCcccccccccccc----ccccCCccccccccccccccccccccc----c-cccccccccccccccccccccccccc
Confidence              589999999975321    122445678999999999999986432    2 366777777666554221110   11


Q ss_pred             ccccccCCCcccchhhHHHHHhhhhc
Q 025705          223 VSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       223 ~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ........+...|+.||.+.+.+++.
T Consensus       136 ~~~~~~~~p~~~Y~~sK~~~E~~~~~  161 (342)
T d2blla1         136 LIVGPVNKPRWIYSVSKQLLDRVIWA  161 (342)
T ss_dssp             CBCCCTTCGGGHHHHHHHHHHHHHHH
T ss_pred             ccccccCCCcchhhhcccchhhhhhh
Confidence            11123335567899999999987753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.44  E-value=1.8e-12  Score=111.51  Aligned_cols=171  Identities=15%  Similarity=0.110  Sum_probs=115.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHH-cCCEEEEEEc---------ChHHHHHHHHHHHHhhc--CCCCCCceEEEEccCCCHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAE-SGAHVVMAVR---------NLKAANELIQKWQEEWS--GKGLPLNIEAMELDLLSLD  133 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~-~G~~Vil~~r---------~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~D~~~~~  133 (249)
                      -.||||||+|-||.+++++|++ .|++|+++|+         ..+..+.....+.....  .......+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            3589999999999999999986 6899999874         22223333333332211  1112246788999999999


Q ss_pred             HHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          134 SVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       134 ~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                      .++++++..    .++|++||.|+.....    ...+.....+++|+.++..+..++..    .+..++++++|...+..
T Consensus        83 ~l~~~~~~~----~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~~~~  150 (383)
T d1gy8a_          83 FLNGVFTRH----GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAIFGN  150 (383)
T ss_dssp             HHHHHHHHS----CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGTBS
T ss_pred             Hhhhhhhcc----ceeehhhccccccccc----ccccccccccccccccccccchhhhc----cCCcccccccccccccc
Confidence            998888753    4799999999975321    12344566788999999999888743    34457888777766554


Q ss_pred             CCCcccc---ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          214 FVDTEDM---NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       214 ~~~~~~~---~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .......   ....+.....+...|+.+|.+.+.+++.
T Consensus       151 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  188 (383)
T d1gy8a_         151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRD  188 (383)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccCCCCCCHHHhhHhHHHHHHHH
Confidence            3222111   1123344556778899999999988763

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1e-13  Score=116.43  Aligned_cols=154  Identities=11%  Similarity=0.034  Sum_probs=100.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |.||||||+|-||.+++++|+++|++|+++++......+...   ...    ...++.....|+.+.            .
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~---~~~----~~~~~d~~~~~~~~~------------~   62 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---HWI----GHENFELINHDVVEP------------L   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---GGT----TCTTEEEEECCTTSC------------C
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH---Hhc----CCCceEEEehHHHHH------------H
Confidence            789999999999999999999999999999863221111111   100    112445555555322            2


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccc--cc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMN--VV  223 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~--~~  223 (249)
                      ..++|++||+|+......    ..++..+.+++|+.++..+.+++..    .+ .++|++||.+.+... ...+..  ..
T Consensus        63 ~~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~vy~~~-~~~~~~e~~~  132 (312)
T d2b69a1          63 YIEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDP-EVHPQSEDYW  132 (312)
T ss_dssp             CCCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSC-SSSSBCTTCC
T ss_pred             HcCCCEEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChheecCC-CCCCCCcccc
Confidence            236999999999653211    1234567789999999999987643    23 379999997665432 211111  12


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+..+...|+.||.+.+.++++
T Consensus       133 ~~~~~~~p~~~Y~~sK~~~E~~~~~  157 (312)
T d2b69a1         133 GHVNPIGPRACYDEGKRVAETMCYA  157 (312)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHH
Confidence            2334456778899999999998864

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.43  E-value=2.9e-13  Score=115.60  Aligned_cols=158  Identities=19%  Similarity=0.117  Sum_probs=110.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++..||||||+|-||.+++++|.++|++|+.+++......      ..      ......+..+|+.+.+.+.++++   
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~------~~~~~~~~~~D~~~~~~~~~~~~---   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TE------DMFCDEFHLVDLRVMENCLKVTE---   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CG------GGTCSEEEECCTTSHHHHHHHHT---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hh------hcccCcEEEeechhHHHHHHHhh---
Confidence            5677999999999999999999999999999987543210      00      00245677889998887765443   


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccc--c-
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTED--M-  220 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~--~-  220 (249)
                          .+|.+||.|+.....   ....+.....+.+|+.++..+..++...    +-.++|++||...+......+.  . 
T Consensus        79 ----~~d~Vih~a~~~~~~---~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk~~i~~SS~~~~~~~~~~~~~~~~  147 (363)
T d2c5aa1          79 ----GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMIEAARIN----GIKRFFYASSACIYPEFKQLETTNVS  147 (363)
T ss_dssp             ----TCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             ----cCCeEeecccccccc---cccccccccccccccchhhHHHHhHHhh----Cccccccccccccccccccccccccc
Confidence                689999999875321   1223456777889999999888886443    4458999999876654322111  1 


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhh
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ....+..+..+...|+.||.+.+.+++
T Consensus       148 ~~~~e~~~~~p~~~Yg~sK~~~E~~~~  174 (363)
T d2c5aa1         148 LKESDAWPAEPQDAFGLEKLATEELCK  174 (363)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHH
T ss_pred             cccccCCcCCCCCHHHHHHHHHHHHHH
Confidence            112223344556789999999998775

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.37  E-value=5.3e-13  Score=113.36  Aligned_cols=159  Identities=16%  Similarity=0.109  Sum_probs=104.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh---HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL---KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.||||||+|-||.+++++|.++|++|.+++++.   ......   + ...    ...++.++.+|++|.+.+.++++  
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~---~-~~~----~~~~i~~~~~Di~d~~~~~~~~~--   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---L-EAI----LGDRVELVVGDIADAELVDKLAA--   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---T-GGG----CSSSEEEEECCTTCHHHHHHHHT--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHH---H-HHh----hcCCeEEEEccCCCHHHHHHHHh--
Confidence            6799999999999999999999998654444321   100000   0 001    12478999999999998877653  


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcc----
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTE----  218 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~----  218 (249)
                           ..|.++|.|+.....    ...++.++.+++|+.|+..+..++...    + .++|++||...+...+...    
T Consensus        73 -----~~~~v~~~a~~~~~~----~~~~~~~~~~~~N~~g~~nll~~~~~~----~-~k~i~~ss~~vyg~~~~~~~~~~  138 (346)
T d1oc2a_          73 -----KADAIVHYAAESHND----NSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPG  138 (346)
T ss_dssp             -----TCSEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTT
T ss_pred             -----hhhhhhhhhhccccc----chhhCcccceeeehHhHHhhhhhhccc----c-ccccccccceEecccCccccccc
Confidence                 577888998865321    122344677899999999998876443    2 3678887776553321111    


Q ss_pred             ----ccccccccccCCCcccchhhHHHHHhhhhc
Q 025705          219 ----DMNVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       219 ----~~~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                          ......+..+..+...|+.+|.+.+.+++.
T Consensus       139 ~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~  172 (346)
T d1oc2a_         139 HGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKA  172 (346)
T ss_dssp             TTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCcccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence                111222333445567899999999988763

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.1e-12  Score=105.48  Aligned_cols=139  Identities=17%  Similarity=0.109  Sum_probs=100.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++|+|+||||+|.||.+++++|.++|.  +|++++|++......            ...++....+|+.+.+++.+   
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------------~~~~i~~~~~D~~~~~~~~~---   76 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------------AYKNVNQEVVDFEKLDDYAS---   76 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------------GGGGCEEEECCGGGGGGGGG---
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------------ccceeeeeeecccccccccc---
Confidence            5678999999999999999999999996  899999976432211            01356677788877654432   


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                          .+.+.|++||++|...       .........++|+.++..+++.+.    +.+-.++|++|+..+..        
T Consensus        77 ----~~~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~----~~~v~~fi~~Ss~~~~~--------  133 (232)
T d2bkaa1          77 ----AFQGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADK--------  133 (232)
T ss_dssp             ----GGSSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT--------
T ss_pred             ----cccccccccccccccc-------cccchhhhhhhcccccceeeeccc----ccCccccccCCcccccc--------
Confidence                3346899999998531       223455667889999888888763    34456899999976542        


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                               .....|+.+|...+...++
T Consensus       134 ---------~~~~~Y~~~K~~~E~~l~~  152 (232)
T d2bkaa1         134 ---------SSNFLYLQVKGEVEAKVEE  152 (232)
T ss_dssp             ---------TCSSHHHHHHHHHHHHHHT
T ss_pred             ---------CccchhHHHHHHhhhcccc
Confidence                     2345699999888776543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.29  E-value=2e-12  Score=108.58  Aligned_cols=157  Identities=15%  Similarity=0.095  Sum_probs=105.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEE------EEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHV------VMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~V------il~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+|||||+|-||.+++++|+++|+.|      +.++.......  ...+...    ....++.++..|.++.+...... 
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPV----DADPRLRFVHGDIRDAGLLAREL-   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGG----TTCTTEEEEECCTTCHHHHHHHT-
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhh----hcCCCeEEEEeccccchhhhccc-
Confidence            48999999999999999999999754      43432211000  0000010    11247889999999998665432 


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccc
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDM  220 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~  220 (249)
                            ...|.++|.|+...    .....+..++.+++|+.++..+.+++..    .+..++|++||.+.+.+. ...++
T Consensus        75 ------~~~d~vi~~a~~~~----~~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~-~~~~~  139 (322)
T d1r6da_          75 ------RGVDAIVHFAAESH----VDRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSI-DSGSW  139 (322)
T ss_dssp             ------TTCCEEEECCSCCC----HHHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCC-SSSCB
T ss_pred             ------cccceEEeeccccc----ccccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCC-CCCCC
Confidence                  36899999998643    2223455567789999999999998743    344589999998766543 22222


Q ss_pred             ccccccccCCCcccchhhHHHHHhhhhc
Q 025705          221 NVVSGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       221 ~~~~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                         ++..+..+...|+.||.+.+.+++.
T Consensus       140 ---~E~~~~~p~~~Y~~sK~~~E~~~~~  164 (322)
T d1r6da_         140 ---TESSPLEPNSPYAASKAGSDLVARA  164 (322)
T ss_dssp             ---CTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCCCCHHHHHHHHHHHHHHH
Confidence               2334445667899999999887753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.21  E-value=1.5e-11  Score=101.10  Aligned_cols=140  Identities=17%  Similarity=0.147  Sum_probs=98.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .+|||||+|-||.+++++|.++|. ++.++++..                       .+.+|++|.+.++++++..    
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~-----------------------~~~~Dl~~~~~~~~~i~~~----   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK-----------------------EFCGDFSNPKGVAETVRKL----   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS-----------------------SSCCCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc-----------------------cccCcCCCHHHHHHHHHHc----
Confidence            389999999999999999999886 444554421                       0247999999999988875    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++||+||.....    ...+.-+..+++|+.++..+..++..     ...+++++||...+.+... .+   .++.
T Consensus        54 -~~D~Vih~Aa~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~~~-~~---~~E~  119 (298)
T d1n2sa_          54 -RPDVIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGTGD-IP---WQET  119 (298)
T ss_dssp             -CCSEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCCTT-CC---BCTT
T ss_pred             -CCCEEEEeccccccc----ccccCccccccccccccccchhhhhc-----cccccccccccccccCCCC-CC---Cccc
Confidence             689999999975321    12234467788999999998888633     2357888887765544322 11   2233


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      .+..+...|+.+|.+.+.+.++
T Consensus       120 ~~~~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         120 DATSPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCCCchHhhhhhhhhhhHHh
Confidence            3445667899999998877653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.21  E-value=6.1e-11  Score=94.11  Aligned_cols=124  Identities=16%  Similarity=0.119  Sum_probs=87.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCE--EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAH--VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~--Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      ++||||||+|.||++++++|+++|++  |+...|++++.+..             ..++.++.+|+++.+.+.++++   
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~---   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------------GGEADVFIGDITDADSINPAFQ---   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------------TCCTTEEECCTTSHHHHHHHHT---
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-------------cCCcEEEEeeeccccccccccc---
Confidence            68999999999999999999999975  56677887654322             1367889999999998877654   


Q ss_pred             ccCCCccEEEeccccCCCCCC---------CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccC
Q 025705          144 GRLGPLHVLINNAGIFSIGEP---------QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVG  213 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~---------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~  213 (249)
                          ++|.+||+|+.......         .............+|+.++..+.......    ..+...+.++.....+
T Consensus        68 ----~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~  138 (252)
T d2q46a1          68 ----GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNP  138 (252)
T ss_dssp             ----TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCT
T ss_pred             ----cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----cccccccccccccCCC
Confidence                58999999986532111         11122345566678888888777665443    3467778777655443

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.14  E-value=1.3e-10  Score=94.88  Aligned_cols=137  Identities=20%  Similarity=0.309  Sum_probs=96.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      .+|||||+|.||.+++++|.++|++|+.++|+.                           +|++|.+.++++++..    
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------------~D~~d~~~~~~~l~~~----   51 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------------LDITNVLAVNKFFNEK----   51 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------------CCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------------ccCCCHHHHHHHHHHc----
Confidence            389999999999999999999999999998752                           4899999999888865    


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                       ++|++||+|+....    +......+..++.|......+.......     ...+++.||...+... ...+   +++.
T Consensus        52 -~~d~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~-~~~~---~~e~  117 (281)
T d1vl0a_          52 -KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGE-AKEP---ITEF  117 (281)
T ss_dssp             -CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSC-CSSC---BCTT
T ss_pred             -CCCEEEeecccccc----ccccccchhhcccccccccccccccccc-----cccccccccceeeecc-cccc---cccc
Confidence             68999999886431    1123344566777877777766655332     2356666665443322 2111   2333


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ....+...|+.+|.+.+.+.++
T Consensus       118 ~~~~~~~~~~~~k~~~e~~~~~  139 (281)
T d1vl0a_         118 DEVNPQSAYGKTKLEGENFVKA  139 (281)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhHHHHHHHH
Confidence            4446777899999988877653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.03  E-value=1.4e-09  Score=89.48  Aligned_cols=142  Identities=12%  Similarity=-0.009  Sum_probs=86.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      ++||||||+|.||++++++|+++|++|+++.|+.........+.......    ..+.++.+|++|.+.+.+.+.     
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~----~~v~~v~~d~~d~~~~~~~~~-----   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ----LGAKLIEASLDDHQRLVDALK-----   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT----TTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhcc----CCcEEEEeecccchhhhhhcc-----
Confidence            45999999999999999999999999999999754321111111111111    367889999999988876554     


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccccc
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSG  225 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~  225 (249)
                        ..+.++++++....               ..|..+...+..++    .+....++++.||........          
T Consensus        75 --~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~----------  123 (312)
T d1qyda_          75 --QVDVVISALAGGVL---------------SHHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIM----------  123 (312)
T ss_dssp             --TCSEEEECCCCSSS---------------STTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSC----------
T ss_pred             --Ccchhhhhhhhccc---------------ccchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCc----------
Confidence              57888888775321               12333333333333    233345677777654332221          


Q ss_pred             cccCCCcccchhhHHHHHhhhh
Q 025705          226 RRKYTSLMGYSGSKLAQVKLET  247 (249)
Q Consensus       226 ~~~~~~~~~Y~asKaal~~l~~  247 (249)
                      ..+..+...|..+|..+..+.+
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~  145 (312)
T d1qyda_         124 EHALQPGSITFIDKRKVRRAIE  145 (312)
T ss_dssp             CCCCSSTTHHHHHHHHHHHHHH
T ss_pred             ccccchhhhhhHHHHHHHHhhc
Confidence            1122344556777776665544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.97  E-value=1.9e-09  Score=84.65  Aligned_cols=131  Identities=12%  Similarity=0.085  Sum_probs=89.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      |.++||||+|.||++++++|+++|+  .|+...|++...                ..+   +..+..|..++.      .
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------------~~~---~~~~~~d~~~~~------~   57 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------------HPR---LDNPVGPLAELL------P   57 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------------CTT---EECCBSCHHHHG------G
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------------ccc---ccccccchhhhh------h
Confidence            8899999999999999999999997  566666653210                012   234555544321      1


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCccccccc
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVV  223 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~  223 (249)
                      ...+.+|.+|+++|....      .....+...++|+.++..+++++    ++.+-.+++++||..+..           
T Consensus        58 ~~~~~~d~vi~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~-----------  116 (212)
T d2a35a1          58 QLDGSIDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADA-----------  116 (212)
T ss_dssp             GCCSCCSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT-----------
T ss_pred             ccccchheeeeeeeeecc------ccccccccccchhhhhhhccccc----cccccccccccccccccc-----------
Confidence            233568999999986421      11223567788999988888876    344556899999976442           


Q ss_pred             cccccCCCcccchhhHHHHHhhhhc
Q 025705          224 SGRRKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       224 ~~~~~~~~~~~Y~asKaal~~l~~~  248 (249)
                            .....|..+|...+...++
T Consensus       117 ------~~~~~y~~~K~~~E~~l~~  135 (212)
T d2a35a1         117 ------KSSIFYNRVKGELEQALQE  135 (212)
T ss_dssp             ------TCSSHHHHHHHHHHHHHTT
T ss_pred             ------ccccchhHHHHHHhhhccc
Confidence                  3445699999998877654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.91  E-value=8.9e-09  Score=86.73  Aligned_cols=79  Identities=24%  Similarity=0.255  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +.|+++||||+|.||.+++++|+++|++|+++.|++.+...  .++..       ...+.++.+|+.|.+++..   .+ 
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-------~~~v~~~~gD~~d~~~~~~---~a-   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-------IPNVTLFQGPLLNNVPLMD---TL-   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-------STTEEEEESCCTTCHHHHH---HH-
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-------cCCCEEEEeeCCCcHHHHH---HH-
Confidence            45899999999999999999999999999999998765432  22221       1357899999998654322   22 


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                        +...|.++.+..
T Consensus        69 --~~~~~~~~~~~~   80 (350)
T d1xgka_          69 --FEGAHLAFINTT   80 (350)
T ss_dssp             --HTTCSEEEECCC
T ss_pred             --hcCCceEEeecc
Confidence              235777766643

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.79  E-value=6.6e-09  Score=85.12  Aligned_cols=151  Identities=16%  Similarity=0.142  Sum_probs=86.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      ||||||+|-||.+++++|+++|+ .|+.+++-.... +.. .+.+            ...+|..+.+........ ....
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~-~~~~------------~~~~~~~~~~~~~~~~~~-~~~~   66 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFV-NLVD------------LNIADYMDKEDFLIQIMA-GEEF   66 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGH-HHHT------------SCCSEEEEHHHHHHHHHT-TCCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhh-cccc------------cchhhhccchHHHHHHhh-hhcc
Confidence            79999999999999999999997 577776322111 010 1111            012233333333222211 1234


Q ss_pred             CCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCCCCcccccccccc
Q 025705          147 GPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGFVDTEDMNVVSGR  226 (249)
Q Consensus       147 g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~~~~~~~~~~~~~  226 (249)
                      ..++++++.|+.....      ....+...+.|+.++..+..++...    + -++++.||.....+.....    ....
T Consensus        67 ~~~~~i~~~aa~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~----~-i~~v~~ss~~~~~~~~~~~----~~~~  131 (307)
T d1eq2a_          67 GDVEAIFHEGACSSTT------EWDGKYMMDNNYQYSKELLHYCLER----E-IPFLYASSAATYGGRTSDF----IESR  131 (307)
T ss_dssp             SSCCEEEECCSCCCTT------CCCHHHHHHHTHHHHHHHHHHHHHH----T-CCEEEEEEGGGGTTCCSCB----CSSG
T ss_pred             cchhhhhhhccccccc------ccccccccccccccccccccccccc----c-ccccccccccccccccccc----cccc
Confidence            5688899988754311      1233455677777777777665433    2 2456666655555432211    1112


Q ss_pred             ccCCCcccchhhHHHHHhhhhc
Q 025705          227 RKYTSLMGYSGSKLAQVKLETK  248 (249)
Q Consensus       227 ~~~~~~~~Y~asKaal~~l~~~  248 (249)
                      ...++...|+.+|.+.+.++++
T Consensus       132 ~~~~~~~~Y~~~K~~~e~~~~~  153 (307)
T d1eq2a_         132 EYEKPLNVYGYSKFLFDEYVRQ  153 (307)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccchhhhhccc
Confidence            3346777899999998887653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.75  E-value=2.3e-12  Score=99.94  Aligned_cols=46  Identities=22%  Similarity=0.349  Sum_probs=42.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhh
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW  113 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~  113 (249)
                      +.|+||+|++|+++|+.|++.|++|++.+|+++++++..+++....
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            6677888999999999999999999999999999999999988754

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.69  E-value=1.6e-07  Score=76.22  Aligned_cols=82  Identities=20%  Similarity=0.266  Sum_probs=60.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH--HHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE--LIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .|.||||||+|.||.+++++|++.|++|++++|+......  ....+.. ...    ..+.++.+|+.+.+...+.++  
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~----~~~~~~~~d~~~~~~~~~~~~--   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLES-FKA----SGANIVHGSIDDHASLVEAVK--   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHH-HHT----TTCEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHh-hcc----CCcEEEEeecccchhhhhhhh--
Confidence            4779999999999999999999999999999997543211  1111221 111    357788999999988776654  


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                           ..+.+|++++.
T Consensus        76 -----~~~~vi~~~~~   86 (307)
T d1qyca_          76 -----NVDVVISTVGS   86 (307)
T ss_dssp             -----TCSEEEECCCG
T ss_pred             -----hceeeeecccc
Confidence                 57888888775

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=7.3e-06  Score=62.32  Aligned_cols=87  Identities=15%  Similarity=0.096  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++++|.|+|.|+ ||.|++++..|++.|. ++.++.|+.+..++..+.+++....    ........|+.+.+.+....
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~   88 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN----TDCVVTVTDLADQQAFAEAL   88 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH----SSCEEEEEETTCHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh----cCcceEeeecccccchhhhh
Confidence            3578999999999 5999999999999998 7889999877665544332221111    23445567888888775544


Q ss_pred             HHHhccCCCccEEEeccccC
Q 025705          140 EAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~  159 (249)
                      .       ..|++||+....
T Consensus        89 ~-------~~diiIN~Tp~G  101 (182)
T d1vi2a1          89 A-------SADILTNGTKVG  101 (182)
T ss_dssp             H-------TCSEEEECSSTT
T ss_pred             c-------ccceeccccCCc
Confidence            3       689999998653

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.19  E-value=1.6e-06  Score=66.00  Aligned_cols=80  Identities=15%  Similarity=0.205  Sum_probs=56.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|.+|+|+||+||+|...+......|++|+.+++++++.+..    ++.    +  ....   +|..+++..+.+.+...
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~----~~~----G--a~~v---i~~~~~~~~~~~~~~~~   95 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQI----G--FDAA---FNYKTVNSLEEALKKAS   95 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHT----T--CSEE---EETTSCSCHHHHHHHHC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH----Hhh----h--hhhh---cccccccHHHHHHHHhh
Confidence            589999999999999999999999999999999997765433    221    1  1212   24444444444444432


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .  .++|+++++.|.
T Consensus        96 ~--~Gvd~v~D~vG~  108 (182)
T d1v3va2          96 P--DGYDCYFDNVGG  108 (182)
T ss_dssp             T--TCEEEEEESSCH
T ss_pred             c--CCCceeEEecCc
Confidence            2  369999999873

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.8e-06  Score=62.74  Aligned_cols=79  Identities=9%  Similarity=0.168  Sum_probs=56.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|++|+|+||+|++|...++.+...|++|+.+++++++.+..    ++ ..     .. .  ..|.++.+..+++.+...
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~-~G-----a~-~--vi~~~~~~~~~~i~~~t~   94 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQ-NG-----AH-E--VFNHREVNYIDKIKKYVG   94 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HH-TT-----CS-E--EEETTSTTHHHHHHHHHC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cc-cC-----cc-c--ccccccccHHHHhhhhhc
Confidence            578999999999999999998888999999999887665433    22 11     11 1  237777665555544443


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      .  ..+|+++.++|
T Consensus        95 ~--~g~d~v~d~~g  106 (174)
T d1yb5a2          95 E--KGIDIIIEMLA  106 (174)
T ss_dssp             T--TCEEEEEESCH
T ss_pred             c--CCceEEeeccc
Confidence            2  25999999876

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.12  E-value=6e-06  Score=62.33  Aligned_cols=80  Identities=19%  Similarity=0.209  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|++|+|+||++++|...++.....|++|+.+++++++.+... ++-         .. +  ..|.++++..+++.+.. 
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lG---------a~-~--vi~~~~~d~~~~v~~~t-   93 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAG---------AW-Q--VINYREEDLVERLKEIT-   93 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHT---------CS-E--EEETTTSCHHHHHHHHT-
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcC---------Ce-E--EEECCCCCHHHHHHHHh-
Confidence            4789999999999999999999999999999999988765442 221         11 2  24666665555543322 


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      + -..+|+++.++|.
T Consensus        94 ~-g~g~d~v~d~~g~  107 (179)
T d1qora2          94 G-GKKVRVVYDSVGR  107 (179)
T ss_dssp             T-TCCEEEEEECSCG
T ss_pred             C-CCCeEEEEeCccH
Confidence            2 1358999999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.04  E-value=1e-05  Score=60.73  Aligned_cols=76  Identities=20%  Similarity=0.253  Sum_probs=56.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +++||.|+|.|+ ||.+++++..|.+.|++|.++.|+.++.++..+.+.+.       ..+..+  +..+.         
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~-------~~~~~~--~~~~~---------   75 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-------GSIQAL--SMDEL---------   75 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-------SSEEEC--CSGGG---------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc-------cccccc--ccccc---------
Confidence            567899999997 68999999999999999999999999988877665542       122222  22211         


Q ss_pred             HhccCCCccEEEeccccC
Q 025705          142 WNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       142 ~~~~~g~id~linnag~~  159 (249)
                         ...+.|++||+....
T Consensus        76 ---~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 ---EGHEFDLIINATSSG   90 (170)
T ss_dssp             ---TTCCCSEEEECCSCG
T ss_pred             ---cccccceeecccccC
Confidence               123689999998654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=98.02  E-value=3.3e-05  Score=58.02  Aligned_cols=78  Identities=21%  Similarity=0.317  Sum_probs=57.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.+++++..+.+...       .++.....|-.           
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~-------~~~~~~~~~~~-----------   75 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-------GNIQAVSMDSI-----------   75 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-------SCEEEEEGGGC-----------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc-------cccchhhhccc-----------
Confidence            567899999987 68899999999998889999999999988888776542       23444443311           


Q ss_pred             HhccCCCccEEEeccccCCC
Q 025705          142 WNGRLGPLHVLINNAGIFSI  161 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~  161 (249)
                         .....|++||+......
T Consensus        76 ---~~~~~diiIN~tp~g~~   92 (171)
T d1p77a1          76 ---PLQTYDLVINATSAGLS   92 (171)
T ss_dssp             ---CCSCCSEEEECCCC---
T ss_pred             ---cccccceeeeccccccc
Confidence               23478999999876543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.01  E-value=8.8e-06  Score=61.57  Aligned_cols=79  Identities=16%  Similarity=0.128  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|++|+|+||+|++|...+..+...|++|+++++++++.+..    ++.    +  .. .+  .|..+.+-.+++.+...
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~----G--a~-~v--i~~~~~~~~~~v~~~t~   91 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRL----G--VE-YV--GDSRSVDFADEILELTD   91 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTT----C--CS-EE--EETTCSTHHHHHHHHTT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc----ccc----c--cc-cc--ccCCccCHHHHHHHHhC
Confidence            578999999999999999999988999999999987664322    221    1  12 22  35555544444433221


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                        ..++|+++.++|
T Consensus        92 --~~g~d~v~d~~g  103 (183)
T d1pqwa_          92 --GYGVDVVLNSLA  103 (183)
T ss_dssp             --TCCEEEEEECCC
T ss_pred             --CCCEEEEEeccc
Confidence              125999999987

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.00  E-value=1.7e-05  Score=59.25  Aligned_cols=82  Identities=20%  Similarity=0.202  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .|.+|+|+| +|++|...+..+...|++|+++++++++++...+ +.         ... .+..|-.+ ++.....+++.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~g---------a~~-~~~~~~~~-~~~~~~~~~~~   92 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CG---------ADV-TLVVDPAK-EEESSIIERIR   92 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT---------CSE-EEECCTTT-SCHHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cC---------CcE-EEeccccc-cccchhhhhhh
Confidence            567899997 6899999999998999999999999887654422 11         122 22223222 22333344444


Q ss_pred             ccCC-CccEEEecccc
Q 025705          144 GRLG-PLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g-~id~linnag~  158 (249)
                      +..| .+|++|.++|.
T Consensus        93 ~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          93 SAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             HHSSSCCSEEEECSCC
T ss_pred             cccccCCceeeecCCC
Confidence            4443 59999999985

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.97  E-value=1.6e-05  Score=59.46  Aligned_cols=74  Identities=20%  Similarity=0.218  Sum_probs=52.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +|.++|.|| |.+|+.+|+.|+++|++|++++|+.+++++..+++          ........+..+.......+.    
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----------~~~~~~~~~~~~~~~~~~~i~----   66 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----------QHSTPISLDVNDDAALDAEVA----   66 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----------TTEEEEECCTTCHHHHHHHHT----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----------cccccccccccchhhhHhhhh----
Confidence            588999987 89999999999999999999999998887765432          123444456655555544432    


Q ss_pred             cCCCccEEEecc
Q 025705          145 RLGPLHVLINNA  156 (249)
Q Consensus       145 ~~g~id~linna  156 (249)
                         ..|.++...
T Consensus        67 ---~~~~~i~~~   75 (182)
T d1e5qa1          67 ---KHDLVISLI   75 (182)
T ss_dssp             ---TSSEEEECS
T ss_pred             ---ccceeEeec
Confidence               356666543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.95  E-value=4.2e-05  Score=56.73  Aligned_cols=85  Identities=25%  Similarity=0.386  Sum_probs=60.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      +++++.++|.|+ |++|..+++.|...|+ ++.++.|+.++.++..+++..           ...  +   .+++.+.+.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-----------~~~--~---~~~~~~~l~   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-----------EAV--R---FDELVDHLA   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-----------EEC--C---GGGHHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-----------ccc--c---chhHHHHhc
Confidence            578899999998 9999999999999998 699999998888777665421           121  2   233333322


Q ss_pred             HHhccCCCccEEEeccccCCCCCCCCCCHHHHHH
Q 025705          141 AWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEE  174 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~  174 (249)
                             ..|++|++.+...  +  -++.+.++.
T Consensus        84 -------~~Divi~atss~~--~--ii~~~~i~~  106 (159)
T d1gpja2          84 -------RSDVVVSATAAPH--P--VIHVDDVRE  106 (159)
T ss_dssp             -------TCSEEEECCSSSS--C--CBCHHHHHH
T ss_pred             -------cCCEEEEecCCCC--c--cccHhhhHH
Confidence                   6899999988532  2  245555553

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.90  E-value=1.4e-05  Score=60.98  Aligned_cols=88  Identities=14%  Similarity=0.147  Sum_probs=55.9

Q ss_pred             CCCEEEE-eCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIV-TGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlI-tGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|.+++| +||+||+|...++.....|++|+.+.|+.+..++..+.+++..      .. .++..|-.+..+..+.+.++
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lG------ad-~vi~~~~~~~~~~~~~v~~~  100 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG------AT-QVITEDQNNSREFGPTIKEW  100 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT------CS-EEEEHHHHHCGGGHHHHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcc------cc-EEEeccccchhHHHHHHHHH
Confidence            3555555 7999999999988888889999999988877777766666531      11 22222211112222333333


Q ss_pred             h-ccCCCccEEEecccc
Q 025705          143 N-GRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~-~~~g~id~linnag~  158 (249)
                      . ...+++|+++++.|.
T Consensus       101 ~~~~g~~vdvv~D~vg~  117 (189)
T d1gu7a2         101 IKQSGGEAKLALNCVGG  117 (189)
T ss_dssp             HHHHTCCEEEEEESSCH
T ss_pred             HhhccCCceEEEECCCc
Confidence            2 233579999999773

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.87  E-value=6.7e-05  Score=56.60  Aligned_cols=83  Identities=10%  Similarity=0.055  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+|.+|+|+|+ |++|...+..+...|+ +|+++++++++++-. +++-         .. .++...-.+..+..+.+.+
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lG---------a~-~vi~~~~~~~~~~~~~i~~   94 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIG---------AD-LTLNRRETSVEERRKAIMD   94 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTT---------CS-EEEETTTSCHHHHHHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cccc---------ce-EEEeccccchHHHHHHHHH
Confidence            35899999997 7999999999999998 899999998877533 2221         11 2222222233333333333


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      .... ..+|++|.++|.
T Consensus        95 ~~~~-~g~Dvvid~vG~  110 (182)
T d1vj0a2          95 ITHG-RGADFILEATGD  110 (182)
T ss_dssp             HTTT-SCEEEEEECSSC
T ss_pred             hhCC-CCceEEeecCCc
Confidence            3222 249999999885

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.85  E-value=4e-05  Score=54.81  Aligned_cols=71  Identities=14%  Similarity=0.239  Sum_probs=55.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++|.|+ |.+|+.+++.|.+.|++|++++++++..+...++           ..+.++..|.++++.++++      ..
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~-----------~~~~vi~Gd~~~~~~l~~~------~i   63 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-----------IDALVINGDCTKIKTLEDA------GI   63 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------CSSEEEESCTTSHHHHHHT------TT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh-----------hhhhhccCcccchhhhhhc------Ch
Confidence            5789997 8999999999999999999999998877665432           1356788999999977664      11


Q ss_pred             CCccEEEec
Q 025705          147 GPLHVLINN  155 (249)
Q Consensus       147 g~id~linn  155 (249)
                      ...|.++..
T Consensus        64 ~~a~~vv~~   72 (132)
T d1lssa_          64 EDADMYIAV   72 (132)
T ss_dssp             TTCSEEEEC
T ss_pred             hhhhhhccc
Confidence            256776664

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=0.0002  Score=53.28  Aligned_cols=81  Identities=19%  Similarity=0.154  Sum_probs=56.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.. +++.         .. .++..+-.+.+...+.++..
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~G---------a~-~~~~~~~~~~~~~~~~~~~~   93 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIG---------AD-LVLQISKESPQEIARKVEGQ   93 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTT---------CS-EEEECSSCCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhC---------Cc-cccccccccccccccccccc
Confidence            4678999987 8999999999999999 799999998877643 2221         11 33334444555554444443


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  ..+|++|.++|.
T Consensus        94 ~g--~g~Dvvid~~G~  107 (171)
T d1pl8a2          94 LG--CKPEVTIECTGA  107 (171)
T ss_dssp             HT--SCCSEEEECSCC
T ss_pred             CC--CCceEEEeccCC
Confidence            22  369999999985

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.73  E-value=0.0006  Score=49.56  Aligned_cols=81  Identities=15%  Similarity=0.100  Sum_probs=58.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..++.+.|.|+ |.+|.++|..++.+|.  +++++|+++++++..+.++.....-.  ...+.+...|..+         
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~--~~~~~~~~~d~~~---------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFA--PKPVDIWHGDYDD---------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSS--SSCCEEEECCGGG---------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCcccc--CCCeEEEECCHHH---------
Confidence            44577888897 9999999999999885  79999999998888877777642211  1233444444311         


Q ss_pred             HHhccCCCccEEEeccccCC
Q 025705          141 AWNGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~~  160 (249)
                           ..+-|++|.++|...
T Consensus        72 -----l~daDvvvitag~~~   86 (148)
T d1ldna1          72 -----CRDADLVVICAGANQ   86 (148)
T ss_dssp             -----TTTCSEEEECCSCCC
T ss_pred             -----hccceeEEEeccccc
Confidence                 235799999999753

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.71  E-value=0.00058  Score=49.50  Aligned_cols=116  Identities=16%  Similarity=0.168  Sum_probs=69.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChH--HHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLK--AANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+.|.||+|.+|..+|..++.+|.  +++++++++.  +++....++...........++.....+  +.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH---------
Confidence            388999999999999999999984  8999998763  4555555666533222222233333321  111         


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEE
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINV  205 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~v  205 (249)
                        ...+-|++|.+||....   ...+.   ...++.|..    +.+.+.+.+.+.....|+.+
T Consensus        71 --~l~~aDvVVitAG~~~~---~g~sR---~dl~~~Na~----iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          71 --IIDESDVVIITSGVPRK---EGMSR---MDLAKTNAK----IVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             --GGTTCSEEEECCSCCCC---TTCCH---HHHHHHHHH----HHHHHHHHHHHHCCCEEEEC
T ss_pred             --HhccceEEEEecccccC---CCCCh---hhhhhhhHH----HHHHHHHHHhccCCCeEEEE
Confidence              12368999999997431   12232   234555544    34444555554444455544

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=0.00084  Score=49.37  Aligned_cols=126  Identities=17%  Similarity=0.139  Sum_probs=78.1

Q ss_pred             cCCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCH
Q 025705           55 QNPLPLPPVNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSL  132 (249)
Q Consensus        55 ~~~~~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  132 (249)
                      +...+...++...+.|.|+ |.+|..+|..|+.+|.  +++++|++++.++..+.++.......+  ........|..+ 
T Consensus         9 ~~~~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~--~~~~~~~~d~~~-   84 (159)
T d2ldxa1           9 QNLVPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLS--TPKIVFGKDYNV-   84 (159)
T ss_dssp             EECSSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCS--CCEEEEESSGGG-
T ss_pred             hhhcccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcC--CCeEEeccchhh-
Confidence            3445555566667888896 9999999999999986  799999999988888778776322111  222233333321 


Q ss_pred             HHHHHHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          133 DSVVRFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       133 ~~v~~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                                   ...-|++|..||......   .+.+   ..++.|    ..+.+.+.+.+.+.. .|.++++|-
T Consensus        85 -------------~~~adivvitag~~~~~~---~~R~---dll~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          85 -------------SANSKLVIITAGARMVSG---QTRL---DLLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             -------------GTTEEEEEECCSCCCCTT---TCSS---CTTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             -------------hccccEEEEecccccCCC---CCHH---HHHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence                         236899999999754221   1211   112233    344666677666544 455555554

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=3.7e-05  Score=49.70  Aligned_cols=42  Identities=26%  Similarity=0.344  Sum_probs=37.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ++.+++|+||++|+|......+...|++|+.+.+++++.+-.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            578899999999999999998888999999999998776544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.65  E-value=0.00049  Score=49.97  Aligned_cols=114  Identities=8%  Similarity=0.043  Sum_probs=68.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESG--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+.+.|.|+ |.+|..+|..|+.+|  .+|+++|+++++++....++.......   ........|..            
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~---~~~~~~~~d~~------------   68 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFT---APKKIYSGEYS------------   68 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGS---CCCEEEECCGG------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccccc---CCceEeeccHH------------
Confidence            356888896 899999999999998  489999999988877776766533221   12334444431            


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEc
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVN  206 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vs  206 (249)
                        ....-|++|.+||.....   .   +.-...+..|.    .+.+...+.+.+... +.++++|
T Consensus        69 --~~~~adivvitag~~~~~---g---~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          69 --DCKDADLVVITAGAPQKP---G---ESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             --GGTTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             --HhccccEEEEecccccCC---C---CCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence              123679999999975321   1   12223344553    445555555555543 4444444

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.64  E-value=1.9e-05  Score=59.62  Aligned_cols=107  Identities=11%  Similarity=0.024  Sum_probs=66.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+|.+|||+||+||+|....+.....|++|+.+++++++.+... ++         +.+. ++  |-.+.  ..+....+
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~l---------Ga~~-vi--~~~~~--~~~~~~~~   94 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL---------GAKE-VL--AREDV--MAERIRPL   94 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT---------TCSE-EE--ECC-----------C
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hc---------ccce-ee--ecchh--HHHHHHHh
Confidence            35789999999999999999988899999999999987764442 11         1122 22  32221  12222222


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcCCccccCC
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNSVMHYVGF  214 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS~~~~~~~  214 (249)
                        .-+++|+++++.|...           +++               .+..++.  .|+|+.++...+....
T Consensus        95 --~~~gvD~vid~vgg~~-----------~~~---------------~l~~l~~--~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2          95 --DKQRWAAAVDPVGGRT-----------LAT---------------VLSRMRY--GGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             --CSCCEEEEEECSTTTT-----------HHH---------------HHHTEEE--EEEEEECSCCSSSCCC
T ss_pred             --hccCcCEEEEcCCchh-----------HHH---------------HHHHhCC--CceEEEeecccCcccC
Confidence              1247999999988421           111               2233333  4899999988766554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.60  E-value=0.00045  Score=50.15  Aligned_cols=119  Identities=12%  Similarity=0.115  Sum_probs=71.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      |.+.|.|+ |.+|..+|..|+.+|.  +++++|+++++++....++.+......  ........|.   +.         
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~--~~~~~~~~d~---~~---------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLE--AHGNIVINDW---AA---------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSS--SCCEEEESCG---GG---------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccC--CccceeccCH---HH---------
Confidence            56778895 8999999999999884  799999999988877777776433221  2233333333   21         


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNS  207 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS  207 (249)
                        ..+-|++|.+||......  +-..+.-...++.|    ..+.+.+.+.+.+... +.++++|-
T Consensus        67 --l~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          67 --LADADVVISTLGNIKLQQ--DNPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             --GTTCSEEEECCSCGGGTC---------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             --hccccEEEEecccccccc--ccCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEecC
Confidence              126799999999753111  10111112223344    3455666666666543 45555443

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=0.00013  Score=57.10  Aligned_cols=81  Identities=17%  Similarity=0.246  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEE
Q 025705           61 PPVNDLTCIVTGS----------------TSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEA  124 (249)
Q Consensus        61 ~~~~~~~vlItGa----------------s~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~  124 (249)
                      .+++|+.||||+|                ||..|.+||+++.++|++|.++......               .....+..
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------------~~p~~~~~   66 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------------PTPPFVKR   66 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------------CCCTTEEE
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------------Cccccccc
Confidence            5789999999987                7889999999999999999998764321               01123333


Q ss_pred             EEccCCCHHHHHHHHHHHhccCCCccEEEeccccCCC
Q 025705          125 MELDLLSLDSVVRFSEAWNGRLGPLHVLINNAGIFSI  161 (249)
Q Consensus       125 ~~~D~~~~~~v~~~~~~~~~~~g~id~linnag~~~~  161 (249)
                      +  .+.+.+++...+.+.   +...|++|.+|++...
T Consensus        67 ~--~~~t~~~m~~~~~~~---~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          67 V--DVMTALEMEAAVNAS---VQQQNIFIGCAAVADY   98 (223)
T ss_dssp             E--ECCSHHHHHHHHHHH---GGGCSEEEECCBCCSE
T ss_pred             c--eehhhHHHHHHHHhh---hccceeEeeeechhhh
Confidence            3  445556665555443   3467999999998653

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.54  E-value=0.00014  Score=53.98  Aligned_cols=80  Identities=10%  Similarity=0.095  Sum_probs=55.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|.+++|.|++|++|...+..+...|+ +|+++++++++.+... ++.         .. .+  .|.++.+..++..+..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~G---------a~-~~--i~~~~~~~~~~~~~~~   93 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAG---------AD-YV--INASMQDPLAEIRRIT   93 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHT---------CS-EE--EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcC---------Cc-ee--eccCCcCHHHHHHHHh
Confidence            568999999999999999999998885 8889999987655442 211         11 22  2445555455544433


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  +.+|++|.++|.
T Consensus        94 ~~--~~~d~vid~~g~  107 (170)
T d1jvba2          94 ES--KGVDAVIDLNNS  107 (170)
T ss_dssp             TT--SCEEEEEESCCC
T ss_pred             hc--ccchhhhccccc
Confidence            21  359999999885

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.54  E-value=5.4e-05  Score=57.51  Aligned_cols=79  Identities=14%  Similarity=0.101  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEE-EEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVV-MAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vi-l~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++++|||+||+||+|...++.....|++++ .+++++++.....+++..         . .  ..|.++++. .+.++++
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga---------d-~--vi~~~~~~~-~~~~~~~   96 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF---------D-A--AVNYKTGNV-AEQLREA   96 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC---------S-E--EEETTSSCH-HHHHHHH
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc---------e-E--EeeccchhH-HHHHHHH
Confidence            458999999999999999988888999644 456676555444333211         1 2  235555443 3334444


Q ss_pred             hccCCCccEEEeccc
Q 025705          143 NGRLGPLHVLINNAG  157 (249)
Q Consensus       143 ~~~~g~id~linnag  157 (249)
                      ..  ..+|+++.+.|
T Consensus        97 ~~--~GvDvv~D~vG  109 (187)
T d1vj1a2          97 CP--GGVDVYFDNVG  109 (187)
T ss_dssp             CT--TCEEEEEESSC
T ss_pred             hc--cCceEEEecCC
Confidence            32  35999999987

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.53  E-value=0.00018  Score=53.74  Aligned_cols=42  Identities=12%  Similarity=0.130  Sum_probs=37.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +|++|+|+||+|++|...+..+...|++|+.+++++++.+..
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~   68 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP   68 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc
Confidence            579999999999999999998888999999999988766543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.47  E-value=0.00018  Score=53.84  Aligned_cols=79  Identities=10%  Similarity=-0.002  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|.+|+|.|+ ||+|...+..+...|+ +|+.+++++++++... ++-.          ..  .+|..+.+..+++.+..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa----------~~--~i~~~~~~~~~~v~~~t   92 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGA----------TD--ILNYKNGHIEDQVMKLT   92 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTC----------SE--EECGGGSCHHHHHHHHT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCc----------cc--cccccchhHHHHHHHHh
Confidence            4788999986 8999999998888998 7999999987765442 2211          12  23555544444333332


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                       +. ..+|++|.++|.
T Consensus        93 -~g-~G~D~vid~~g~  106 (174)
T d1jqba2          93 -NG-KGVDRVIMAGGG  106 (174)
T ss_dssp             -TT-SCEEEEEECSSC
T ss_pred             -hc-cCcceEEEccCC
Confidence             21 249999999985

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.45  E-value=0.00024  Score=53.00  Aligned_cols=79  Identities=16%  Similarity=0.226  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~  141 (249)
                      +|.+|+|.|+ +|+|...+..+...|+ +|+++++++++.+...+.        +  .. ..  .|..+ .+.+.+..+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~--------G--a~-~~--i~~~~~~~~~~~~~~~   93 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV--------G--AT-EC--VNPQDYKKPIQEVLTE   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT--------T--CS-EE--ECGGGCSSCHHHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh--------C--Ce-eE--EecCCchhHHHHHHHH
Confidence            6789999999 6899999999999986 899999998886544221        1  11 11  23322 2334455555


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      ...  +.+|++|.+.|.
T Consensus        94 ~~~--~G~D~vid~~G~  108 (176)
T d2jhfa2          94 MSN--GGVDFSFEVIGR  108 (176)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             Hhc--CCCCEEEecCCc
Confidence            433  479999999885

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.39  E-value=0.00011  Score=52.38  Aligned_cols=73  Identities=16%  Similarity=0.218  Sum_probs=52.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |.++|.|+ |-+|..+|+.|.++|++|++++.+++..+...    +        .....+.+|.++++.++++-      
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~--------~~~~~~~gd~~~~~~l~~a~------   61 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S--------YATHAVIANATEENELLSLG------   61 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----T--------TCSEEEECCTTCTTHHHHHT------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----H--------hCCcceeeecccchhhhccC------
Confidence            45677766 79999999999999999999999987766542    1        12345668999988776541      


Q ss_pred             CCCccEEEeccc
Q 025705          146 LGPLHVLINNAG  157 (249)
Q Consensus       146 ~g~id~linnag  157 (249)
                      ..+.|.+|...+
T Consensus        62 i~~a~~vi~~~~   73 (134)
T d2hmva1          62 IRNFEYVIVAIG   73 (134)
T ss_dssp             GGGCSEEEECCC
T ss_pred             CccccEEEEEcC
Confidence            124677766544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.33  E-value=0.0041  Score=45.53  Aligned_cols=119  Identities=14%  Similarity=0.076  Sum_probs=75.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      ..+.+.+.|.|+ |.+|.++|..|+.+|.  +++++|++++.++..+.++.....-.+  ........|..+        
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~--~~~~~~~~d~~~--------   85 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQ--TPKIVADKDYSV--------   85 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCC--CSEEEECSSGGG--------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccC--CCeEEeccchhh--------
Confidence            355678888896 8999999999999986  799999999988888777765322111  122222233322        


Q ss_pred             HHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          140 EAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                            ...-|++|..||....   ...+..   ..+..|    ..+.+.+.+.+.+.. .+-++++|-
T Consensus        86 ------~~~adiVVitAg~~~~---~g~tR~---~l~~~N----~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          86 ------TANSKIVVVTAGVRQQ---EGESRL---NLVQRN----VNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ------GTTCSEEEECCSCCCC---TTCCGG---GGHHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ------cccccEEEEecCCccc---cCcchH---HHHHHH----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence                  1367999999997532   122222   223334    345566666666644 355666554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.25  E-value=0.006  Score=43.70  Aligned_cols=114  Identities=12%  Similarity=-0.008  Sum_probs=70.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcC--hHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRN--LKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+.|+||+|.+|.++|..++.++.  +++++|.+  ++.++....++.....-.   .+......|..+           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~---~~~~i~~~~~~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYD---SNTRVRQGGYED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTT---CCCEEEECCGGG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccccc---CCceEeeCCHHH-----------
Confidence            478999999999999999999986  69999854  455555555665533211   234444444321           


Q ss_pred             hccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          143 NGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       143 ~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                         ..+-|++|..||.... +  ..+   -.+.++.|.    .+.+.+.+.+.+.. .+.+++++-
T Consensus        68 ---~~~aDiVvitaG~~~~-~--g~~---R~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 ---TAGSDVVVITAGIPRQ-P--GQT---RIDLAGDNA----PIMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             ---GTTCSEEEECCCCCCC-T--TCC---HHHHHHHHH----HHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             ---hhhcCEEEEecccccc-c--CCc---hhhHHHHHH----HHHHHHHHHHHhcCCCceEEEecC
Confidence               1268999999997531 1  122   334555554    35556666666654 345555543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00087  Score=48.70  Aligned_cols=75  Identities=13%  Similarity=0.107  Sum_probs=57.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccC
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRL  146 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~  146 (249)
                      +++|.|. +-+|..+++.|.++|.+|++++.+++...+..++...        ..+.++.+|.++++.++++-      .
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--------~~~~vi~Gd~~d~~~L~~a~------i   69 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--------DNADVIPGDSNDSSVLKKAG------I   69 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--------TTCEEEESCTTSHHHHHHHT------T
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--------CCcEEEEccCcchHHHHHhc------c
Confidence            5788887 5999999999999999999999998776666655543        25788899999998776541      2


Q ss_pred             CCccEEEecc
Q 025705          147 GPLHVLINNA  156 (249)
Q Consensus       147 g~id~linna  156 (249)
                      .+.|.+|...
T Consensus        70 ~~a~~vi~~~   79 (153)
T d1id1a_          70 DRCRAILALS   79 (153)
T ss_dssp             TTCSEEEECS
T ss_pred             ccCCEEEEcc
Confidence            2567777664

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.22  E-value=0.00072  Score=50.16  Aligned_cols=79  Identities=14%  Similarity=0.171  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC-CHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL-SLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~  141 (249)
                      +|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++++.. +++-.          ..++  |.. +.+.+.+.+++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~lGa----------~~~i--~~~~~~~~~~~~~~~   93 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGA----------TECI--NPQDFSKPIQEVLIE   93 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTC----------SEEE--CGGGCSSCHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHhCC----------cEEE--eCCchhhHHHHHHHH
Confidence            5789999998 5999999999999997 577777777775433 33321          1222  332 22344555555


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      ...  +.+|++|.++|.
T Consensus        94 ~~~--~g~D~vid~~G~  108 (176)
T d2fzwa2          94 MTD--GGVDYSFECIGN  108 (176)
T ss_dssp             HTT--SCBSEEEECSCC
T ss_pred             HcC--CCCcEeeecCCC
Confidence            433  469999999884

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.22  E-value=0.0047  Score=44.12  Aligned_cols=112  Identities=15%  Similarity=0.046  Sum_probs=69.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           68 CIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      +.|.|+ |.+|..+|..++.++.  +++++|+++++++....++.....-.   .+......|.   +++          
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~---~~~~~~~~~~---~~~----------   65 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFT---RRANIYAGDY---ADL----------   65 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGS---CCCEEEECCG---GGG----------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccccccc---ccccccCCcH---HHh----------
Confidence            567786 8999999999999874  89999999988887777766643221   2333433333   211          


Q ss_pred             CCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          146 LGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       146 ~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                       .+-|++|.+||....   ...+.   ...+..|.    .+.+.+.+.+.+.. .+.++++|-
T Consensus        66 -~~adivvitag~~~~---~g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          66 -KGSDVVIVAAGVPQK---PGETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             -TTCSEEEECCCCCCC---SSCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             -cCCCEEEEecccccC---CCcch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeCC
Confidence             267999999997532   12222   23344453    34555555555543 355555543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.19  E-value=0.00099  Score=49.75  Aligned_cols=80  Identities=14%  Similarity=0.150  Sum_probs=53.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH-HHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS-VVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~  140 (249)
                      -+|.+|+|.|+ ||+|...+..+...|+ +|+.+++++++++... ++-.         . .++  |..+.+. .+...+
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA---------~-~~i--n~~~~~~~~~~~~~   93 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGA---------T-ECI--SPKDSTKPISEVLS   93 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTC---------S-EEE--CGGGCSSCHHHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCC---------c-EEE--CccccchHHHHHHH
Confidence            46789999986 8999999999999996 8999999999876443 2211         1 222  3333222 223333


Q ss_pred             HHhccCCCccEEEecccc
Q 025705          141 AWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       141 ~~~~~~g~id~linnag~  158 (249)
                      ...  -+.+|++|.+.|.
T Consensus        94 ~~~--g~G~d~vi~~~g~  109 (176)
T d1d1ta2          94 EMT--GNNVGYTFEVIGH  109 (176)
T ss_dssp             HHH--TSCCCEEEECSCC
T ss_pred             Hhc--cccceEEEEeCCc
Confidence            222  2369999999885

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.17  E-value=0.0019  Score=46.54  Aligned_cols=114  Identities=12%  Similarity=0.136  Sum_probs=64.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|+||+|.+|.++|..|+.+|.  +++++|.++.+.+  ..++...  . .. ......   + ...+..+.   +  
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~--~-~~-~~~~~~---~-~~~~~~~~---~--   66 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHI--E-TR-ATVKGY---L-GPEQLPDC---L--   66 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTS--S-SS-CEEEEE---E-SGGGHHHH---H--
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhh--h-hh-cCCCeE---E-cCCChHHH---h--
Confidence            478999999999999999999986  7999998865432  2333321  1 00 111111   1 12222221   1  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                        .+-|++|..||.... +  ..+.   .+.++.|..-.    +.+.+.+.+.. .+.|+++|.
T Consensus        67 --~~aDivVitag~~~~-~--g~sR---~~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          67 --KGCDVVVIPAGVPRK-P--GMTR---DDLFNTNATIV----ATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             --TTCSEEEECCSCCCC-T--TCCG---GGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSS
T ss_pred             --CCCCEEEECCCcCCC-C--CCCc---chHHHHHHHHH----HHHHHHHHhcCCCeEEEEecC
Confidence              268999999997431 1  1222   23355565444    44444444433 356666665

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.17  E-value=0.0018  Score=47.68  Aligned_cols=41  Identities=17%  Similarity=0.161  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +|.+++|.|+ |++|...+..+...|++|+++++++++++..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a   67 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA   67 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence            5789999987 8999998888778899999999998877544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.16  E-value=0.00093  Score=49.88  Aligned_cols=50  Identities=26%  Similarity=0.460  Sum_probs=43.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhh
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEW  113 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~  113 (249)
                      +++||.|+|.|++ |.+++++..|.+.| +|.++.|+.++.++..+++....
T Consensus        15 ~~~~k~vlIlGaG-G~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~   64 (177)
T d1nvta1          15 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL   64 (177)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCc-HHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhh
Confidence            4789999999874 89999999998777 99999999999999988887644

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.0003  Score=52.88  Aligned_cols=42  Identities=26%  Similarity=0.344  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      .++++||+||+||+|...++.....|++|+.+++++++.+..
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            346899999999999999998888999999999998886544

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.14  E-value=0.0013  Score=48.75  Aligned_cols=78  Identities=15%  Similarity=0.119  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++...    + ..      ...++  |.+ .+.+++..+..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~-~g------a~~~i--~~~-~~~~~~~~~~~   96 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----R-LG------ADHVV--DAR-RDPVKQVMELT   96 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----H-TT------CSEEE--ETT-SCHHHHHHHHT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----h-cc------cceee--cCc-ccHHHHHHHhh
Confidence            4688999886 9999999988888887 6777888877654442    2 11      11222  333 23444444433


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ..  ..+|++|.++|.
T Consensus        97 ~~--~g~d~vid~~g~  110 (172)
T d1h2ba2          97 RG--RGVNVAMDFVGS  110 (172)
T ss_dssp             TT--CCEEEEEESSCC
T ss_pred             CC--CCceEEEEecCc
Confidence            22  359999999985

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.13  E-value=0.0022  Score=46.74  Aligned_cols=82  Identities=17%  Similarity=0.050  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +.+.+.|.|+ |.+|..+|..++.++. +++++|.+++.++..+.++.........  .......  ++.+   +   .+
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~--~~~~~~~--~~~~---~---~~   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDT--NVSVRAE--YSYE---A---AL   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTC--CCCEEEE--CSHH---H---HH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCC--eeEEecc--Cchh---h---hh
Confidence            3467888897 9999999999999885 8999999998888777777653321111  1111111  1111   1   11


Q ss_pred             hccCCCccEEEeccccCC
Q 025705          143 NGRLGPLHVLINNAGIFS  160 (249)
Q Consensus       143 ~~~~g~id~linnag~~~  160 (249)
                          ..-|++|..+|...
T Consensus        75 ----~~adiVvitag~~~   88 (154)
T d1pzga1          75 ----TGADCVIVTAGLTK   88 (154)
T ss_dssp             ----TTCSEEEECCSCSS
T ss_pred             ----cCCCeEEEeccccc
Confidence                26899999999763

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.12  E-value=0.00022  Score=53.12  Aligned_cols=42  Identities=33%  Similarity=0.440  Sum_probs=36.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ++.+|||+||+||+|...++.....|++|+.+.+++++.+..
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            456799999999999999988888899999999998776554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.08  E-value=0.00073  Score=50.27  Aligned_cols=79  Identities=10%  Similarity=0.092  Sum_probs=52.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAH-VVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+|.+|+|.|+ |++|...+..+...|++ |+++++++++++... ++-          ...+  .|..+.+ ..+.+.+
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~G----------a~~~--i~~~~~~-~~~~i~~   91 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLG----------ATHV--INSKTQD-PVAAIKE   91 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHT----------CSEE--EETTTSC-HHHHHHH
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcC----------CeEE--EeCCCcC-HHHHHHH
Confidence            35788999997 89999999988888985 556677776655442 221          1123  3555543 3333344


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      +..  +.+|++|.++|.
T Consensus        92 ~t~--gg~D~vid~~G~  106 (174)
T d1f8fa2          92 ITD--GGVNFALESTGS  106 (174)
T ss_dssp             HTT--SCEEEEEECSCC
T ss_pred             HcC--CCCcEEEEcCCc
Confidence            332  479999999985

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.07  E-value=0.002  Score=47.20  Aligned_cols=41  Identities=15%  Similarity=0.123  Sum_probs=35.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +|.+|+|.|+ |++|...+..+...|++|+++++++++++..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            4788999886 8999999988888899999999998876543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.06  E-value=0.0013  Score=49.05  Aligned_cols=80  Identities=15%  Similarity=0.139  Sum_probs=52.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCC-HHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLS-LDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~  140 (249)
                      -+|.+|+|.|+ ||||...+..+...|+ +|+++++++++++.. +++-          -..++  |..+ .+..+...+
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~G----------a~~~i--~~~~~~~~~~~~~~   92 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALG----------ATDCL--NPRELDKPVQDVIT   92 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTT----------CSEEE--CGGGCSSCHHHHHH
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHhC----------CCccc--CCccchhhhhhhHh
Confidence            46789999975 9999999999999999 688889988876433 2221          11222  3222 223334444


Q ss_pred             HHhccCCCccEEEecccc
Q 025705          141 AWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       141 ~~~~~~g~id~linnag~  158 (249)
                      ...  -+.+|++|.++|.
T Consensus        93 ~~~--~~G~d~vie~~G~  108 (174)
T d1e3ia2          93 ELT--AGGVDYSLDCAGT  108 (174)
T ss_dssp             HHH--TSCBSEEEESSCC
T ss_pred             hhh--cCCCcEEEEeccc
Confidence            433  2479999999985

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00076  Score=49.83  Aligned_cols=74  Identities=18%  Similarity=0.234  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|.+|+|.|+ |++|...+..+...|+++++++++.++.+. .+++..         . .+  .|..+.+...       
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~lGa---------d-~~--i~~~~~~~~~-------   88 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALGA---------D-EV--VNSRNADEMA-------   88 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHTC---------S-EE--EETTCHHHHH-------
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-HhccCC---------c-EE--EECchhhHHH-------
Confidence            5789999986 899999888888899999999998887643 233211         1 12  3555554322       


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      .....+|++|.++|.
T Consensus        89 ~~~~~~D~vid~~g~  103 (168)
T d1uufa2          89 AHLKSFDFILNTVAA  103 (168)
T ss_dssp             TTTTCEEEEEECCSS
T ss_pred             HhcCCCceeeeeeec
Confidence            122479999999885

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.03  E-value=0.0034  Score=45.04  Aligned_cols=115  Identities=16%  Similarity=0.093  Sum_probs=66.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEE-EccCCCHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM-ELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~v~~~~~~~~  143 (249)
                      +.+.|.|+ |.+|.++|..|+.++. +++++|.+++..+....++.....-..  ....+. ..|..+.           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~--~~~~i~~~~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEG--FDVRVTGTNNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHT--CCCCEEEESCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccC--CCCEEEecCcHHHh-----------
Confidence            45677786 9999999999999886 899999998887776666654221111  112222 1222211           


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                         ..-|++|.+||.....   .   +.-.+.+..|.    .+.+...+.+.+.. .+.++++|-
T Consensus        68 ---~~advvvitag~~~~~---~---~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          68 ---ANSDVIVVTSGAPRKP---G---MSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             ---TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             ---cCCCEEEEeeeccCCc---C---cchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence               2579999999975321   1   11223344453    45666666666644 345555443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.01  E-value=0.013  Score=41.92  Aligned_cols=113  Identities=15%  Similarity=0.143  Sum_probs=68.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEE-EccCCCHHHHHHHHHHHh
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAM-ELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~v~~~~~~~~  143 (249)
                      .+.|.|+ |.+|.++|..++.+|.  +++++|+++++++....++.....-..   ..... ..|.   +.+        
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~---~~~i~~~~~~---~~~--------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP---TVSIDGSDDP---EIC--------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST---TCEEEEESCG---GGG--------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCC---CceeecCCCH---HHh--------
Confidence            3667786 9999999999999986  799999999888777777765322111   12222 2222   211        


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCC-CeEEEEcC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSP-SRIINVNS  207 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-g~Iv~vsS  207 (249)
                         ..-|++|..||....   ...+..   +.+..|.    .+.+.+.+.+.+... +.++++|-
T Consensus        68 ---~daDvVVitaG~~~~---~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          68 ---RDADMVVITAGPRQK---PGQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             ---TTCSEEEECCCCCCC---TTCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             ---hCCcEEEEecccccC---CCCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence               257999999997531   122332   3455554    344444555555433 45555553

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.00  E-value=0.00096  Score=50.71  Aligned_cols=80  Identities=18%  Similarity=0.112  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|.+|+|.|+ +++|...+..+...|+ +|+++++++++++... ++       +    ... ..|-.+.+..+++.+ +
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~-------G----a~~-~~~~~~~~~~~~i~~-~   89 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-------G----FEI-ADLSLDTPLHEQIAA-L   89 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-------T----CEE-EETTSSSCHHHHHHH-H
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hc-------c----ccE-EEeCCCcCHHHHHHH-H
Confidence            5789999986 7999888887777888 7889999987765432 11       1    111 234444433333333 3


Q ss_pred             hccCCCccEEEeccccC
Q 025705          143 NGRLGPLHVLINNAGIF  159 (249)
Q Consensus       143 ~~~~g~id~linnag~~  159 (249)
                      ... ..+|++|.+.|..
T Consensus        90 t~g-~g~D~vid~vG~~  105 (195)
T d1kola2          90 LGE-PEVDCAVDAVGFE  105 (195)
T ss_dssp             HSS-SCEEEEEECCCTT
T ss_pred             hCC-CCcEEEEECcccc
Confidence            222 3699999999853

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.96  E-value=0.0052  Score=44.46  Aligned_cols=119  Identities=16%  Similarity=0.152  Sum_probs=69.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ..+.|.|+ |.+|.++|..++.++. +++++|++++.++....++.....-.+  .+......|  +.+           
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~--~~~~v~~~~--~~~-----------   67 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY--SNCKVSGSN--TYD-----------   67 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT--CCCCEEEEC--CGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccC--CCcEEEecc--ccc-----------
Confidence            45778895 8999999998888886 899999999888777777665321111  122333222  111           


Q ss_pred             cCCCccEEEeccccCCCCC-C-CCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGE-P-QKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~-~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                      ....-|++|.++|...... . .+.+.   ...+..|.    .+.+.+.+.+.+.. .+.++++|-
T Consensus        68 ~~~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          68 DLAGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             ccCCCcEEEEecccccCCCCCccccch---hHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            1236899999999753211 1 11112   22344453    34455555555433 345566554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.91  E-value=0.0028  Score=45.55  Aligned_cols=113  Identities=12%  Similarity=0.031  Sum_probs=63.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|.|+ |.+|.++|..++.++.  +++++|++++.++....++.....-   .........|   .+           
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~---~~~~~~~~~~---~~-----------   64 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPF---MGQMSLYAGD---YS-----------   64 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCC---TTCEEEC--C---GG-----------
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCccc---CCCeeEeeCc---HH-----------
Confidence            3566687 9999999999999986  7999999998776666666542211   1223322222   11           


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                      ....-|++|..||.... +  ..+   -...++.|.    .+.+.+.+.+.+.. .+.++++|-
T Consensus        65 ~~~~adivvitag~~~~-~--~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          65 DVKDCDVIVVTAGANRK-P--GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             GGTTCSEEEECCCC---------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             HhCCCceEEEecccccC-c--Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            12357999999997531 1  112   234455554    44455555555533 355666554

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.91  E-value=0.0018  Score=48.18  Aligned_cols=80  Identities=19%  Similarity=0.211  Sum_probs=53.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH-HHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD-SVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~v~~~~~  140 (249)
                      -+|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++... ++    .      -..+  .|.++.+ .+.+..+
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l----G------a~~~--i~~~~~d~~~~~~~~   91 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL----G------ATEC--LNPKDYDKPIYEVIC   91 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT----T------CSEE--ECGGGCSSCHHHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc----C------CcEE--EcCCCchhHHHHHHH
Confidence            46789999986 8999999999999997 7889999988875542 21    1      1122  2443322 2333333


Q ss_pred             HHhccCCCccEEEecccc
Q 025705          141 AWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       141 ~~~~~~g~id~linnag~  158 (249)
                      ...  -+.+|++|.++|.
T Consensus        92 ~~~--~~G~d~vid~~g~  107 (174)
T d1p0fa2          92 EKT--NGGVDYAVECAGR  107 (174)
T ss_dssp             HHT--TSCBSEEEECSCC
T ss_pred             Hhc--CCCCcEEEEcCCC
Confidence            332  2469999999885

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.85  E-value=0.0078  Score=42.98  Aligned_cols=77  Identities=16%  Similarity=0.076  Sum_probs=50.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           68 CIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      +.|+|+ |.+|.++|..++.+|.  +++++|+++++++....++........  .+..+...  .+.+.           
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~--~~~~i~~~--~~~~~-----------   66 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGL--FDTKVTGS--NDYAD-----------   66 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHT--CCCEEEEE--SCGGG-----------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhc--ccceEEec--CCHHH-----------
Confidence            667796 8999999999999984  899999999887766655544221111  12223222  22221           


Q ss_pred             CCCccEEEeccccCC
Q 025705          146 LGPLHVLINNAGIFS  160 (249)
Q Consensus       146 ~g~id~linnag~~~  160 (249)
                      ..+-|++|.+||...
T Consensus        67 ~~dadvvvitag~~~   81 (142)
T d1guza1          67 TANSDIVIITAGLPR   81 (142)
T ss_dssp             GTTCSEEEECCSCCC
T ss_pred             hcCCeEEEEEEecCC
Confidence            236799999999753

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.85  E-value=0.013  Score=41.78  Aligned_cols=113  Identities=12%  Similarity=0.051  Sum_probs=68.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEE-ccCCCHHHHHHHHHHHhc
Q 025705           68 CIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME-LDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~v~~~~~~~~~  144 (249)
                      +.|.|+ |.+|.++|..++.+|.  +++++|++++.++....++........  ....... .|..+             
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~--~~~~i~~~~d~~~-------------   66 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGID--KYPKIVGGADYSL-------------   66 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTT--CCCEEEEESCGGG-------------
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccC--CCCccccCCCHHH-------------
Confidence            567786 9999999999998885  799999999988877777765432221  1122222 23321             


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                       ...-|++|..||.....   ..+.   .+.+..|.    .+.+.+.+.+.+.. .+.++++|-
T Consensus        67 -~~~adiVvitag~~~~~---g~~r---~~l~~~n~----~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          67 -LKGSEIIVVTAGLARKP---GMTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             -GTTCSEEEECCCCCCCS---SCCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             -hccccEEEEeccccCCC---CCch---HHHHHHhh----HHHHHHHHHHHhhCCCcEEEEecC
Confidence             13679999999975321   1222   33344443    34455555555543 355555554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0015  Score=49.51  Aligned_cols=46  Identities=22%  Similarity=0.222  Sum_probs=39.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE  112 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~  112 (249)
                      |.+.|.|+ |-+|..+|..++..|++|+++|++++.++...+.+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~   50 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEES   50 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHH
Confidence            67889998 67999999999999999999999998887777666543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.82  E-value=0.0039  Score=46.77  Aligned_cols=46  Identities=22%  Similarity=0.190  Sum_probs=39.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEE  112 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~  112 (249)
                      ++|.|.|+ |-+|..+|..++..|++|++.|++++.+++..+.+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~   50 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL   50 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhh
Confidence            45888898 67999999999999999999999998887776665543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.80  E-value=0.0011  Score=48.99  Aligned_cols=44  Identities=25%  Similarity=0.429  Sum_probs=37.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQK  108 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~  108 (249)
                      +++.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+...+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~   60 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL   60 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence            4678999988 7999999999999998 799999999887776544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.77  E-value=0.0098  Score=43.04  Aligned_cols=115  Identities=12%  Similarity=0.080  Sum_probs=63.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC---------EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA---------HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~---------~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      .|.|+||+|.+|..++..|+..+.         +++..+++.+.++....++.....     .....+...-.+.+    
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~----   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-----PLLAGLEATDDPKV----   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-----TTEEEEEEESCHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-----ccccccccCCchhh----
Confidence            699999999999999999998763         233334555555555544443211     12333322221111    


Q ss_pred             HHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-C-CCeEEEEcC
Q 025705          138 FSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-S-PSRIINVNS  207 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~-~g~Iv~vsS  207 (249)
                             .+...|++|..+|...   -+..+.+   +.++.|..    +.+.+.+.+.+. . .+.|+.+|-
T Consensus        77 -------~~~~advViitaG~~~---~pg~~r~---dl~~~N~~----i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          77 -------AFKDADYALLVGAAPR---KAGMERR---DLLQVNGK----IFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             -------HTTTCSEEEECCCCCC---CTTCCHH---HHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             -------hcccccEEEeecCcCC---CCCCcHH---HHHHHHHH----HHHHHHHHHHHhCCCCcEEEEecC
Confidence                   1237899999999753   1223333   33444543    445555555542 2 345555553

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.73  E-value=0.0039  Score=45.95  Aligned_cols=80  Identities=13%  Similarity=0.161  Sum_probs=51.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH-HHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS-VVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~  140 (249)
                      -+|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++++... ++    .      -.+++  |..+.+. .++..+
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~----G------Ad~~i--n~~~~~~~~~~~~~   92 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF----G------ATDFV--NPNDHSEPISQVLS   92 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----T------CCEEE--CGGGCSSCHHHHHH
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-Hc----C------CcEEE--cCCCcchhHHHHHH
Confidence            35788999986 6788888888888877 7888999988875542 21    1      11222  4333322 233333


Q ss_pred             HHhccCCCccEEEecccc
Q 025705          141 AWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       141 ~~~~~~g~id~linnag~  158 (249)
                      ....  +.+|+++.++|.
T Consensus        93 ~~~~--~G~d~vid~~G~  108 (175)
T d1cdoa2          93 KMTN--GGVDFSLECVGN  108 (175)
T ss_dssp             HHHT--SCBSEEEECSCC
T ss_pred             hhcc--CCcceeeeecCC
Confidence            3322  369999999985

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.73  E-value=0.003  Score=43.35  Aligned_cols=38  Identities=24%  Similarity=0.475  Sum_probs=34.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      +++||+++|.|++ .+|..-++.|++.|++|++++....
T Consensus         9 ~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           9 QLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence            7899999999987 5999999999999999999887654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.00083  Score=44.61  Aligned_cols=38  Identities=8%  Similarity=0.071  Sum_probs=33.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      +++||+++|.|. |.-|.++|+.|.++|++|.+.|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999998 56799999999999999999998654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.64  E-value=0.0042  Score=44.76  Aligned_cols=80  Identities=18%  Similarity=0.166  Sum_probs=53.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      =+++.|.||.|-+|..+|+.|.+.|++|.+.+|+.....+..   .+   .    .+......   ..+.+...++++..
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~---~~---~----~~~v~~~~---~~~~~~~v~~~~~~   75 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI---LA---N----ADVVIVSV---PINLTLETIERLKP   75 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH---HT---T----CSEEEECS---CGGGHHHHHHHHGG
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh---hh---h----cccccccc---chhhheeeeecccc
Confidence            367999999999999999999999999999999876544322   11   0    23333333   34456666677665


Q ss_pred             cCCCccEEEeccc
Q 025705          145 RLGPLHVLINNAG  157 (249)
Q Consensus       145 ~~g~id~linnag  157 (249)
                      ...+=.+++..+.
T Consensus        76 ~~~~~~iiiD~~S   88 (152)
T d2pv7a2          76 YLTENMLLADLTS   88 (152)
T ss_dssp             GCCTTSEEEECCS
T ss_pred             cccCCceEEEecc
Confidence            4433335555544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.63  E-value=0.0093  Score=43.40  Aligned_cols=86  Identities=16%  Similarity=0.153  Sum_probs=53.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHH-HhhcC---CCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ-EEWSG---KGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~-~~~~~---~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +.|.|. |-+|..+|+.|.+.|++|+.++|+++..++..+.-. .....   .-...++.++..   ..+.++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            556655 899999999999999999999999877665433210 00000   001123333322   3567888888887


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      ....+=.++++.++
T Consensus        79 ~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          79 PHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGSCTTCEEEECCS
T ss_pred             hhcccccceeeccc
Confidence            76555556666544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.57  E-value=0.035  Score=40.93  Aligned_cols=115  Identities=9%  Similarity=0.026  Sum_probs=62.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcCh--HHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNL--KAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVV  136 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~  136 (249)
                      ..|.||||+|.||.+++..|++...       .+.+.+...  +.++...-++..-..     .....+.. -++..   
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-----~~~~~~~~-~~~~~---   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-----PLLREVSI-GIDPY---   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-----TTEEEEEE-ESCHH---
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-----ccccCccc-cccch---
Confidence            4699999999999999999997532       455666544  334444444443211     11111111 11211   


Q ss_pred             HHHHHHhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcC-C-CCeEEEEc
Q 025705          137 RFSEAWNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRG-S-PSRIINVN  206 (249)
Q Consensus       137 ~~~~~~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~-~-~g~Iv~vs  206 (249)
                      +       .+.+.|++|..+|...   -...+   -...++.|..    +.+...+.+.+. . ...|+.++
T Consensus        96 ~-------~~~~aDvVvi~ag~~r---kpg~t---R~Dll~~N~~----I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 E-------VFEDVDWALLIGAKPR---GPGME---RAALLDINGQ----IFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             H-------HTTTCSEEEECCCCCC---CTTCC---HHHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             h-------hccCCceEEEeeccCC---CCCCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCcEEEEec
Confidence            1       1347899999999753   12223   3345555644    444444445442 2 23455554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.042  Score=39.18  Aligned_cols=114  Identities=13%  Similarity=0.136  Sum_probs=64.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-C--CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           67 TCIVTGSTSGIGREIARQLAES-G--AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~-G--~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .+.|+|++|.+|.++|..|+.+ +  .+++++|..+ ..+..+.++... .   .......+ .+-.+.+.+        
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~-~---~~~~~~~~-~~~~~~~~~--------   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-P---TAVKIKGF-SGEDATPAL--------   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTS-C---SSCEEEEE-CSSCCHHHH--------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCC-c---cccCCcEE-EcCCCcccc--------
Confidence            4789999999999999988754 4  5899999864 444444455441 1   11122221 222233222        


Q ss_pred             ccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCC-CCeEEEEcC
Q 025705          144 GRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGS-PSRIINVNS  207 (249)
Q Consensus       144 ~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~-~g~Iv~vsS  207 (249)
                         -.-|++|..||.....   ..+.   .+.++.|..    +.+.+.+.+.+.. .+.++++|.
T Consensus        68 ---~~aDvvvitaG~~~k~---g~~R---~dl~~~N~~----i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          68 ---EGADVVLISAGVRRKP---GMDR---SDLFNVNAG----IVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             ---TTCSEEEECCSCCCCT---TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             ---CCCCEEEECCCccCCC---Ccch---hhHHHHHHH----HHHHHHHHHHhhCCCcEEEEccC
Confidence               1579999999975321   1122   233555644    3344444444432 356666665

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.44  E-value=0.012  Score=43.34  Aligned_cols=85  Identities=13%  Similarity=0.162  Sum_probs=59.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH---------------HHHhhcCCCCCCceEEEEccCC
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK---------------WQEEWSGKGLPLNIEAMELDLL  130 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~v~~~~~D~~  130 (249)
                      +.+-|.|- |-+|..+|+.|++.|++|++++|++++.++..++               +.+..      .+...+...+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~------~~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL------KKPRRIILLVK   75 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB------CSSCEEEECSC
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh------cccceEEEecC
Confidence            34566665 7899999999999999999999999988776543               11111      12234445667


Q ss_pred             CHHHHHHHHHHHhccCCCccEEEeccc
Q 025705          131 SLDSVVRFSEAWNGRLGPLHVLINNAG  157 (249)
Q Consensus       131 ~~~~v~~~~~~~~~~~g~id~linnag  157 (249)
                      +.+.+.++.+.+.....+=+++|....
T Consensus        76 ~~~~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          76 AGQAVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             TTHHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             chHHHHHHHHHHHhccccCcEEEecCc
Confidence            777888888877765545567776644

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.41  E-value=0.0035  Score=46.35  Aligned_cols=41  Identities=24%  Similarity=0.186  Sum_probs=35.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELI  106 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~  106 (249)
                      .|++.|.|+ |.+|.++|..|+++|++|.+++|++++.+...
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            378899998 79999999999999999999999987765543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0082  Score=48.25  Aligned_cols=25  Identities=20%  Similarity=0.255  Sum_probs=22.4

Q ss_pred             CCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           74 TSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        74 s~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      ||..|.++|+.+..+|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            6789999999999999999998653

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.36  E-value=0.0071  Score=44.01  Aligned_cols=41  Identities=15%  Similarity=0.081  Sum_probs=34.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +|.+++|.|+ |++|...+..+...|++|+++++++++++..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            4688999875 8999998888888999999999998876543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.25  E-value=0.022  Score=41.67  Aligned_cols=88  Identities=16%  Similarity=0.116  Sum_probs=61.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      ..+...|+|.|+. -.|.+-++...+.|++|.+.|.++++++........         .+..   -..+.+.+++.+. 
T Consensus        29 gv~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---------~~~~---~~~~~~~l~~~~~-   94 (168)
T d1pjca1          29 GVKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---------RVEL---LYSNSAEIETAVA-   94 (168)
T ss_dssp             TBCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---------GSEE---EECCHHHHHHHHH-
T ss_pred             CCCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---------ccee---ehhhhhhHHHhhc-
Confidence            3456788999875 688999999999999999999999888766544332         2222   3445655555443 


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCH
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSK  169 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~  169 (249)
                            .-|++|.++=+.....+.-.+.
T Consensus        95 ------~aDivI~aalipG~~aP~lIt~  116 (168)
T d1pjca1          95 ------EADLLIGAVLVPGRRAPILVPA  116 (168)
T ss_dssp             ------TCSEEEECCCCTTSSCCCCBCH
T ss_pred             ------cCcEEEEeeecCCcccCeeecH
Confidence                  4799999998765544444443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.11  E-value=0.0075  Score=45.80  Aligned_cols=45  Identities=27%  Similarity=0.440  Sum_probs=38.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      ..+++||+|+|-| .|.+|..+|+.|.+.|++|++.+.+.+.....
T Consensus        22 ~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          22 LGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            3479999999997 67899999999999999999999987766543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.08  E-value=0.017  Score=41.81  Aligned_cols=89  Identities=19%  Similarity=0.182  Sum_probs=51.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCC-CCCCceEEEEccCCCHHHHHHHHH---HHh
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGK-GLPLNIEAMELDLLSLDSVVRFSE---AWN  143 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~---~~~  143 (249)
                      +-|.| .|-+|..+|+.|++.|++|++.+|++++.++..+.-.....+. ....+..++..=+.+.+.+++++.   .+.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            34444 4789999999999999999999999888776543110000000 000122334445667777777652   233


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      ....+=+++|.+..
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            32233355665533

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.01  E-value=0.023  Score=40.96  Aligned_cols=33  Identities=15%  Similarity=0.221  Sum_probs=26.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------EEEEEEcCh
Q 025705           67 TCIVTGSTSGIGREIARQLAESGA-------HVVMAVRNL   99 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~-------~Vil~~r~~   99 (249)
                      .|.|+||+|.+|.++|..|+..+.       .+++.+.+.
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~   44 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence            689999999999999999997652       366666554

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.01  E-value=0.0045  Score=43.32  Aligned_cols=69  Identities=14%  Similarity=0.160  Sum_probs=49.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      |+++|.|. +.+|..++++|.  |.+|++++.+++..+..    ..        ..+.++.+|.++++.++++      .
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~----~~--------~~~~~i~Gd~~~~~~L~~a------~   59 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV----LR--------SGANFVHGDPTRVSDLEKA------N   59 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH----HH--------TTCEEEESCTTSHHHHHHT------T
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH----Hh--------cCccccccccCCHHHHHHh------h
Confidence            57888885 689999999994  56788888888765443    22        2467888999999877653      1


Q ss_pred             CCCccEEEec
Q 025705          146 LGPLHVLINN  155 (249)
Q Consensus       146 ~g~id~linn  155 (249)
                      ..+-+.+|..
T Consensus        60 i~~A~~vi~~   69 (129)
T d2fy8a1          60 VRGARAVIVN   69 (129)
T ss_dssp             CTTCSEEEEC
T ss_pred             hhcCcEEEEe
Confidence            2356677654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.075  Score=35.95  Aligned_cols=83  Identities=18%  Similarity=0.243  Sum_probs=60.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +.++.|.| +|=+|+-++....+.|+++++.+.+++.-...              ..-.++..|..|.+.+.++..+.  
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~--------------va~~~i~~~~~d~~~l~~~~~~~--   73 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH--------------VAHRSHVINMLDGDALRRVVELE--   73 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--------------GSSEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh--------------cCCeEEECCCCCHHHHHHHHHhh--
Confidence            45689998 55899999999999999999999886532111              12256778999999999888764  


Q ss_pred             cCCCccEEEeccccCCCCCCCCCCHHHHHHH
Q 025705          145 RLGPLHVLINNAGIFSIGEPQKFSKDGYEEH  175 (249)
Q Consensus       145 ~~g~id~linnag~~~~~~~~~~~~~~~~~~  175 (249)
                         .+|++..        .++..+.+.++..
T Consensus        74 ---~~DviT~--------E~EnI~~~~L~~l   93 (111)
T d1kjqa2          74 ---KPHYIVP--------EIEAIATDMLIQL   93 (111)
T ss_dssp             ---CCSEEEE--------CSSCSCHHHHHHH
T ss_pred             ---CCceEEE--------EecCcCHHHHHHH
Confidence               6788743        4666666665554

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.32  E-value=0.12  Score=38.24  Aligned_cols=42  Identities=26%  Similarity=0.221  Sum_probs=35.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA  101 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~  101 (249)
                      ....+.|+++.|.| .|.||+++|+.+...|++|+..++...+
T Consensus        38 ~~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          38 SGTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CBCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            34568899999988 5699999999999999999999986543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.28  E-value=0.0083  Score=43.10  Aligned_cols=37  Identities=14%  Similarity=0.292  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      .+++||++||.||+ .+|..-|+.|++.|++|.+++..
T Consensus         9 ~~l~gkrvLViGgG-~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGGG-EVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEES-HHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCC
Confidence            36899999999994 69999999999999999998653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.018  Score=42.15  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      .++.||+++|.|-|.-+|+-++..|.++|+.|.++......++
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            3688999999999999999999999999999998876654443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.90  E-value=0.017  Score=42.43  Aligned_cols=42  Identities=17%  Similarity=0.202  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAA  102 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~  102 (249)
                      .+++||+++|.|.|.=+|+-++..|+++|+.|.++......+
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            368999999999999999999999999999999988765444

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.86  E-value=0.093  Score=37.84  Aligned_cols=89  Identities=10%  Similarity=0.104  Sum_probs=53.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcChHHHHHHHHHHHH-hh-cC----CCCCCceEEEEccCCCHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNLKAANELIQKWQE-EW-SG----KGLPLNIEAMELDLLSLDSVVR  137 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~~~~~~~~~~~~~-~~-~~----~~~~~~v~~~~~D~~~~~~v~~  137 (249)
                      |.++|.|. |-||.++|+.|.+.|+  +|+.+|++++.++...+.-.- .. ..    .....++.++   .+-.+.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhh
Confidence            35788875 8999999999999996  688889998776554432100 00 00    0000122222   223566777


Q ss_pred             HHHHHhccCCCccEEEecccc
Q 025705          138 FSEAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       138 ~~~~~~~~~g~id~linnag~  158 (249)
                      +++++.....+=.+++..++.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888877665544556555543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.85  E-value=0.032  Score=41.97  Aligned_cols=72  Identities=19%  Similarity=0.152  Sum_probs=50.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++.|++|+=.|+++|+   ++..++..|+ +|+.++.+++.++...    +..      .++.++.+|+.+.       
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar----~N~------~~~~~~~~D~~~l-------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAK----RNC------GGVNFMVADVSEI-------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHH----HHC------TTSEEEECCGGGC-------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHH----Hcc------ccccEEEEehhhc-------
Confidence            46789999999988873   3445677786 6999999876654332    221      2567888888542       


Q ss_pred             HHHhccCCCccEEEecccc
Q 025705          140 EAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~  158 (249)
                            -+++|++|.|.-.
T Consensus       105 ------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 ------SGKYDTWIMNPPF  117 (197)
T ss_dssp             ------CCCEEEEEECCCC
T ss_pred             ------CCcceEEEeCccc
Confidence                  2579999999654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.82  E-value=0.27  Score=36.63  Aligned_cols=39  Identities=23%  Similarity=0.196  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      ..+.||++.|.|-+ .||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~G-~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGTG-HIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEeccc-ccchhHHHhHhhhcccccccCcccc
Confidence            56889999999865 8999999999999999999987643

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.42  Score=35.11  Aligned_cols=39  Identities=13%  Similarity=-0.009  Sum_probs=33.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ...+.++++.|.| .|.||+.+|+.+...|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            3468899999985 56999999999999999999998753

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.74  E-value=0.075  Score=41.04  Aligned_cols=34  Identities=21%  Similarity=0.427  Sum_probs=30.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEc
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVR   97 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r   97 (249)
                      +++++|+|.| .||+|..+++.|++.|. ++.++|.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            5668999999 56999999999999999 7888874

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.72  E-value=0.11  Score=37.81  Aligned_cols=36  Identities=22%  Similarity=0.370  Sum_probs=31.7

Q ss_pred             CCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH
Q 025705           73 STSGIGREIARQLAESGAHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        73 as~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~  108 (249)
                      |.|-+|..+|+.|++.|++|.+.+|++++.++..++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            567899999999999999999999999888777654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.71  E-value=0.096  Score=38.65  Aligned_cols=40  Identities=28%  Similarity=0.342  Sum_probs=35.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           59 PLPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        59 ~~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ..+.+.|+++.|.|.+. ||+.+++.+...|++|+..+|++
T Consensus        36 ~~~~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          36 EIPLIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCCCCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCcccCceEEEecccc-ccccceeeeeccccccccccccc
Confidence            34568999999999875 99999999999999999999874

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.64  E-value=0.22  Score=35.59  Aligned_cols=38  Identities=16%  Similarity=0.158  Sum_probs=31.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHH
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELI  106 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~  106 (249)
                      |-+. |.|-+|.++|+.|++.|++|.+.+|++++.+...
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            5555 4578999999999999999999999988766543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.61  E-value=0.02  Score=48.47  Aligned_cols=33  Identities=27%  Similarity=0.461  Sum_probs=28.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEc
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVR   97 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r   97 (249)
                      ++..|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECC
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEEC
Confidence            3567999998 5799999999999998 7888875

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.59  E-value=0.018  Score=41.54  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=30.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA  101 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~  101 (249)
                      .+.|.|+ |.+|..++..|++.|++|.+++|+++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4788888 899999999999999999999998653

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.54  E-value=0.1  Score=39.13  Aligned_cols=76  Identities=16%  Similarity=0.130  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEeCCCCc-hHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSG-IGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        61 ~~~~~~~vlItGas~g-IG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      .+++|++||=-|+++| +|.    .++.+|+ +|+.++.+++.++...+.+...      +.+..++..|+.+.      
T Consensus        43 ~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~------~~~~~~~~~d~~~~------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEF------KGKFKVFIGDVSEF------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGG------TTSEEEEESCGGGC------
T ss_pred             CCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHc------CCCceEEECchhhh------
Confidence            4678999999997766 443    3456786 8999999987776665554331      24677777886432      


Q ss_pred             HHHHhccCCCccEEEeccccC
Q 025705          139 SEAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~  159 (249)
                             .+++|++|.|.-..
T Consensus       107 -------~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 -------NSRVDIVIMNPPFG  120 (201)
T ss_dssp             -------CCCCSEEEECCCCS
T ss_pred             -------CCcCcEEEEcCccc
Confidence                   24799999997653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.51  E-value=0.39  Score=34.69  Aligned_cols=79  Identities=8%  Similarity=0.049  Sum_probs=44.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-----CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           67 TCIVTGSTSGIGREIARQLAES-----GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~-----G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+.|.||++.....+...++.+     +.+|+++|.++++++.....+.......+...++... .   |.+   +.+  
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---d~~---eal--   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-T---DPE---EAF--   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-S---CHH---HHH--
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-C---Chh---hcc--
Confidence            4667777654332233333332     2379999999999886666655543322222222222 1   221   111  


Q ss_pred             HhccCCCccEEEeccccC
Q 025705          142 WNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       142 ~~~~~g~id~linnag~~  159 (249)
                           .+-|++|+.+|..
T Consensus        76 -----~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVG   88 (167)
T ss_dssp             -----SSCSEEEECCCTT
T ss_pred             -----CCCCEEEECCCcC
Confidence                 3689999999974

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.45  E-value=0.063  Score=37.72  Aligned_cols=76  Identities=20%  Similarity=0.269  Sum_probs=51.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCEEEE-EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           67 TCIVTGSTSGIGREIARQLAES-GAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~-G~~Vil-~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      .+.|.|++|-+|+++++...+. ++.++. +++.. .+...    ..   .     +.. +..|+|.++.+.+.++...+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~~----~~---~-----~~D-vvIDFS~p~~~~~~~~~~~~   66 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSLL----TD---G-----NTE-VVIDFTHPDVVMGNLEFLID   66 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHHH----HT---T-----TCS-EEEECCCTTTHHHHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhhh----cc---c-----cCC-EEEEcccHHHHHHHHHHHHh
Confidence            4789999999999999987764 667654 45432 22111    11   0     111 34699999999999998876


Q ss_pred             cCCCccEEEecccc
Q 025705          145 RLGPLHVLINNAGI  158 (249)
Q Consensus       145 ~~g~id~linnag~  158 (249)
                      .  ++-+++-..|.
T Consensus        67 ~--~~~~ViGTTG~   78 (135)
T d1yl7a1          67 N--GIHAVVGTTGF   78 (135)
T ss_dssp             T--TCEEEECCCCC
T ss_pred             c--CCCEEEecccc
Confidence            5  57777766664

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.43  E-value=0.096  Score=37.40  Aligned_cols=88  Identities=15%  Similarity=0.066  Sum_probs=55.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhccCC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGRLG  147 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~g  147 (249)
                      +-+.|- |-+|..+|+.|++.|+.+ ..+|+.++.++..++............+...+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445555 789999999999988754 578888777666655433221111112333444556677788888888776655


Q ss_pred             CccEEEeccc
Q 025705          148 PLHVLINNAG  157 (249)
Q Consensus       148 ~id~linnag  157 (249)
                      +-.++|.+..
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5566666543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.27  E-value=0.034  Score=40.87  Aligned_cols=38  Identities=32%  Similarity=0.402  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      .+++||+++|.|-|.=+|+-+|..|+++|+.|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            47999999999999999999999999999999887654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.22  E-value=0.053  Score=37.75  Aligned_cols=73  Identities=14%  Similarity=0.246  Sum_probs=53.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEE-EEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVM-AVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil-~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      .+.|.|++|-+|+++++.+.++|++++. ++++....          ...    .+   +..|+|.++.+.+.++...+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~----------~~~----~D---VvIDFS~p~~~~~~l~~~~~~   64 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE----------LDS----PD---VVIDFSSPEALPKTVDLCKKY   64 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE----------CSC----CS---EEEECSCGGGHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH----------hcc----CC---EEEEecCHHHHHHHHHHHHhc
Confidence            3889999999999999999999998765 45442110          000    12   346999999999999988875


Q ss_pred             CCCccEEEecccc
Q 025705          146 LGPLHVLINNAGI  158 (249)
Q Consensus       146 ~g~id~linnag~  158 (249)
                        ++.+++-..|.
T Consensus        65 --~~p~ViGTTG~   75 (128)
T d1vm6a3          65 --RAGLVLGTTAL   75 (128)
T ss_dssp             --TCEEEECCCSC
T ss_pred             --CCCEEEEcCCC
Confidence              56777766664

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.19  E-value=0.06  Score=39.11  Aligned_cols=39  Identities=21%  Similarity=0.310  Sum_probs=35.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA  101 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~  101 (249)
                      .+.||+++|.|=. -||+.+|+.+...|++|++++.++-+
T Consensus        21 ~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence            4789999999865 79999999999999999999998754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.14  E-value=0.27  Score=36.53  Aligned_cols=36  Identities=14%  Similarity=0.049  Sum_probs=29.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHH
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANE  104 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~  104 (249)
                      +.|. |.|-+|..+|..|++.|++|+.+|.++++.+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            4455 66799999999999999999999998765433

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.08  E-value=0.43  Score=35.29  Aligned_cols=39  Identities=18%  Similarity=0.193  Sum_probs=34.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ...+.||++.|.|. |.||+.+|+.+...|++|+..++..
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcc
Confidence            45689999999975 5899999999999999999998864

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.07  E-value=0.3  Score=35.68  Aligned_cols=77  Identities=19%  Similarity=0.192  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|.+||=.|+++|   .++..+++.+.+|+.++.+++.++...+.+++.    +...++.++.+|..+.          .
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~----gl~~~v~~~~gda~~~----------~   95 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH----GLGDNVTLMEGDAPEA----------L   95 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT----TCCTTEEEEESCHHHH----------H
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHc----CCCcceEEEECchhhc----------c
Confidence            5688999998776   334456677889999999998888777776653    2334788888875211          1


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      .....+|.++.+.+
T Consensus        96 ~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          96 CKIPDIDIAVVGGS  109 (186)
T ss_dssp             TTSCCEEEEEESCC
T ss_pred             cccCCcCEEEEeCc
Confidence            22357899887643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.00  E-value=0.13  Score=37.98  Aligned_cols=42  Identities=14%  Similarity=0.079  Sum_probs=34.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELI  106 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~  106 (249)
                      +...|+|.||. -.|.+-++.....|++|.+.|.++++++...
T Consensus        28 ~pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          28 PPARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            44678888875 6899999999999999999999988776553

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.90  E-value=0.42  Score=35.09  Aligned_cols=39  Identities=18%  Similarity=0.200  Sum_probs=33.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ..++.++++.|.|. |.||+++|+.+...|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            45688999999985 5899999999999999999999754

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.85  E-value=0.19  Score=38.28  Aligned_cols=75  Identities=9%  Similarity=0.010  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .+++.||=.|++.|.   ++..|+++|.+|+.+|.+++-++...+++...      +.++.++..|+.+.+         
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~------~~~v~~~~~d~~~~~---------   97 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ------GLKPRLACQDISNLN---------   97 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT------TCCCEEECCCGGGCC---------
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc------Cccceeeccchhhhc---------
Confidence            445789999998885   77888899999999999988776665555441      136788888886542         


Q ss_pred             hccCCCccEEEeccc
Q 025705          143 NGRLGPLHVLINNAG  157 (249)
Q Consensus       143 ~~~~g~id~linnag  157 (249)
                        ..+++|+++...+
T Consensus        98 --~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 --INRKFDLITCCLD  110 (246)
T ss_dssp             --CSCCEEEEEECTT
T ss_pred             --ccccccccceeee
Confidence              1247998886533

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.83  E-value=0.064  Score=38.21  Aligned_cols=40  Identities=18%  Similarity=0.305  Sum_probs=33.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHH
Q 025705           68 CIVTGSTSGIGREIARQLAESG-AHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~  108 (249)
                      +.+.|+ |-+|.++++.|.+.| ++|.+++|++++.++..++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            455665 899999999999888 7999999999887766554

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.75  E-value=0.64  Score=37.18  Aligned_cols=118  Identities=9%  Similarity=0.053  Sum_probs=68.1

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGST-SGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas-~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +|++||=.|+. |+++.++    +..|+ +|+.++.+++.++...+.+...    +...++.++..|+.+      ..+.
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~n----gl~~~~~~~~~d~~~------~~~~  210 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLN----GVEDRMKFIVGSAFE------EMEK  210 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHT----TCGGGEEEEESCHHH------HHHH
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHc----CCCccceeeechhhh------hhHH
Confidence            36888877754 5555544    45676 7999999998877776665552    333467777777642      2233


Q ss_pred             HhccCCCccEEEeccccCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHhchhhhcCCCCeEEEEcC
Q 025705          142 WNGRLGPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLFPSLIRGSPSRIINVNS  207 (249)
Q Consensus       142 ~~~~~g~id~linnag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~g~Iv~vsS  207 (249)
                      ......++|++|.+.-.....      ........    .....+.+.+++.++..  |.++..+.
T Consensus       211 ~~~~~~~fD~Vi~DpP~~~~~------~~~~~~~~----~~y~~l~~~a~~ll~pG--G~lv~~s~  264 (324)
T d2as0a2         211 LQKKGEKFDIVVLDPPAFVQH------EKDLKAGL----RAYFNVNFAGLNLVKDG--GILVTCSC  264 (324)
T ss_dssp             HHHTTCCEEEEEECCCCSCSS------GGGHHHHH----HHHHHHHHHHHTTEEEE--EEEEEEEC
T ss_pred             HHhccCCCCchhcCCccccCC------HHHHHHHH----HHHHHHHHHHHHHcCCC--cEEEEEeC
Confidence            333345799999986543221      12222211    12234555666666553  55555443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.73  E-value=0.42  Score=33.66  Aligned_cols=78  Identities=12%  Similarity=0.089  Sum_probs=51.8

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSG-IGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        62 ~~~~~~vlItGas~g-IG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      .++|+.||=.|+++| +|.    +.+.+|+ +|+.++.+++..+...+.+...    +...++.++..|..+      .+
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~----~~~~~~~ii~~D~~~------~l   77 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMT----KAENRFTLLKMEAER------AI   77 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTT----TCGGGEEEECSCHHH------HH
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhc----ccccchhhhcccccc------cc
Confidence            467899998886655 554    4566787 8999999987766655554432    233578888888532      22


Q ss_pred             HHHhccCCCccEEEecc
Q 025705          140 EAWNGRLGPLHVLINNA  156 (249)
Q Consensus       140 ~~~~~~~g~id~linna  156 (249)
                      +.   ..++.|+++.+.
T Consensus        78 ~~---~~~~fDiIf~DP   91 (152)
T d2esra1          78 DC---LTGRFDLVFLDP   91 (152)
T ss_dssp             HH---BCSCEEEEEECC
T ss_pred             cc---cccccceeEech
Confidence            22   235789998874

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.64  E-value=0.095  Score=40.24  Aligned_cols=47  Identities=19%  Similarity=0.365  Sum_probs=39.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~  108 (249)
                      .+++|++++|-|- |.+|..+|+.|.+.|++|+.++.+....+...++
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            4688999998875 4899999999999999999999988777665543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.52  E-value=0.29  Score=37.98  Aligned_cols=72  Identities=18%  Similarity=0.229  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|++||=.|+++|+   ++..+++.|++|+.+|.++...+...+..+..    +  .++.++..|+.+         .. 
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n----~--~~~~~~~~d~~~---------~~-  180 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN----G--VRPRFLEGSLEA---------AL-  180 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT----T--CCCEEEESCHHH---------HG-
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc----C--CceeEEeccccc---------cc-
Confidence            57899999999886   33456778999999999999887776665542    1  345666666421         11 


Q ss_pred             ccCCCccEEEec
Q 025705          144 GRLGPLHVLINN  155 (249)
Q Consensus       144 ~~~g~id~linn  155 (249)
                       ..++.|+++.|
T Consensus       181 -~~~~fD~V~an  191 (254)
T d2nxca1         181 -PFGPFDLLVAN  191 (254)
T ss_dssp             -GGCCEEEEEEE
T ss_pred             -cccccchhhhc
Confidence             12579999876

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.52  E-value=0.58  Score=37.36  Aligned_cols=82  Identities=16%  Similarity=0.114  Sum_probs=53.6

Q ss_pred             CCCCEEEEeCCC-CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGST-SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas-~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+|+.||=.++. ||++.+    ++..|.+|+.++.++..++...+.+...    +. .++.++..|..+..      +.
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~n----gl-~~~~~i~~d~~~~~------~~  208 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLN----GL-GNVRVLEANAFDLL------RR  208 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHT----TC-TTEEEEESCHHHHH------HH
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHc----CC-CCcceeeccHHHHh------hh
Confidence            367888877755 455443    3455779999999998887776666552    22 35778887774422      22


Q ss_pred             HhccCCCccEEEeccccC
Q 025705          142 WNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       142 ~~~~~g~id~linnag~~  159 (249)
                      ......++|.+|.+.-..
T Consensus       209 ~~~~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         209 LEKEGERFDLVVLDPPAF  226 (318)
T ss_dssp             HHHTTCCEEEEEECCCCS
T ss_pred             hHhhhcCCCEEEEcCCcc
Confidence            222335799999997543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.16  E-value=0.24  Score=39.36  Aligned_cols=76  Identities=16%  Similarity=0.177  Sum_probs=52.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      ..+|++||-.|++.|+   ++..+++.|+ +|+.++.++.- ....+...+    .+...++.++..|+.+...      
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~----~~~~~~i~~~~~~~~~l~~------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRL----NKLEDTITLIKGKIEEVHL------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHH----TTCTTTEEEEESCTTTSCC------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHH----hCCCccceEEEeeHHHhcC------
Confidence            3568999999999886   5777888897 79999988753 333333333    1233578888888876431      


Q ss_pred             HHhccCCCccEEEec
Q 025705          141 AWNGRLGPLHVLINN  155 (249)
Q Consensus       141 ~~~~~~g~id~linn  155 (249)
                          ....+|++|..
T Consensus        99 ----~~~~~D~Ivse  109 (311)
T d2fyta1          99 ----PVEKVDVIISE  109 (311)
T ss_dssp             ----SCSCEEEEEEC
T ss_pred             ----ccccceEEEEe
Confidence                12468999875

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.12  E-value=0.093  Score=35.98  Aligned_cols=35  Identities=29%  Similarity=0.231  Sum_probs=29.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ++|.++|.||+ -+|.++|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViGgG-~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGSG-YIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECCh-HHHHHHHHHhhccceEEEEEEecC
Confidence            35778888664 999999999999999999998864

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.00  E-value=0.72  Score=33.26  Aligned_cols=78  Identities=13%  Similarity=0.141  Sum_probs=45.9

Q ss_pred             EEEEeCCCCchH--HHHHHHHHHc----CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           67 TCIVTGSTSGIG--REIARQLAES----GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        67 ~vlItGas~gIG--~~ia~~l~~~----G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+.|.|| |.+|  .++...++..    +.+++++|.++++++.....+.+.....+.  ...+..  .+|.+   +.+ 
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~--~~~i~~--~td~~---eaL-   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGA--DLKFEK--TMNLD---DVI-   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTC--CCEEEE--ESCHH---HHH-
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCC--CeEEEE--eCChh---hcc-
Confidence            4677776 4444  4455555543    358999999999988776666654433222  222221  12322   222 


Q ss_pred             HHhccCCCccEEEeccccC
Q 025705          141 AWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       141 ~~~~~~g~id~linnag~~  159 (249)
                            ...|++|+.++..
T Consensus        75 ------~dad~Vv~~~~~g   87 (171)
T d1obba1          75 ------IDADFVINTAMVG   87 (171)
T ss_dssp             ------TTCSEEEECCCTT
T ss_pred             ------cCCCeEeeecccc
Confidence                  3689999998864

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.96  E-value=0.09  Score=36.00  Aligned_cols=35  Identities=23%  Similarity=0.367  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      ++.++|.||+ -+|.++|..|+++|.+|.++.+.+.
T Consensus        30 ~~~vvIIGgG-~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGGG-VIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECcc-hhHHHHHHHhhcccceEEEEeeccc
Confidence            4778888765 8999999999999999999998753

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.82  E-value=0.11  Score=37.86  Aligned_cols=44  Identities=18%  Similarity=0.086  Sum_probs=36.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ  110 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~  110 (249)
                      +|.+||..|++.|   ..+..|+++|++|+.+|.+++-++...+..+
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~   63 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERG   63 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence            5789999999887   4777999999999999999887766655543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.72  E-value=0.13  Score=37.59  Aligned_cols=41  Identities=15%  Similarity=0.356  Sum_probs=31.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHH
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQE  111 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~  111 (249)
                      +.|.|+ |..|.++|..|++.|.+|.+++|..+.  +..+.+.+
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            566666 589999999999999999999986542  34455544

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.67  E-value=0.43  Score=35.74  Aligned_cols=81  Identities=12%  Similarity=0.062  Sum_probs=55.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|.+||-.|+++|--.++..++...+.+|+.++.+++.++...+.+....     ..++.++..|..+..          
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-----~~n~~~~~~d~~~~~----------  139 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-----IENVIFVCGDGYYGV----------  139 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCGGGCC----------
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-----ccccccccCchHHcc----------
Confidence            46789999988877666555555556689999999888877777665521     135667767764321          


Q ss_pred             ccCCCccEEEeccccC
Q 025705          144 GRLGPLHVLINNAGIF  159 (249)
Q Consensus       144 ~~~g~id~linnag~~  159 (249)
                      ...+++|.++.+++..
T Consensus       140 ~~~~~fD~I~~~~~~~  155 (213)
T d1dl5a1         140 PEFSPYDVIFVTVGVD  155 (213)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             ccccchhhhhhhccHH
Confidence            1124799999887753

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.48  E-value=0.74  Score=35.89  Aligned_cols=78  Identities=19%  Similarity=0.222  Sum_probs=52.1

Q ss_pred             CEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           66 LTCIVTGSTSG-IGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        66 ~~vlItGas~g-IG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +.++-.|+++| |+.+++ +  ...++|+.+|.+++.++-..+.++..    +...++.+...|+.+.         ..+
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~----~~~~~~~i~~~~~~~~---------~~~  175 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERH----GVSDRFFVRKGEFLEP---------FKE  175 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHT----TCTTSEEEEESSTTGG---------GGG
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHc----CCCceeEEeecccccc---------ccc
Confidence            45665666555 554544 3  35789999999998887776666552    2224677778888643         223


Q ss_pred             cCCCccEEEeccccC
Q 025705          145 RLGPLHVLINNAGIF  159 (249)
Q Consensus       145 ~~g~id~linnag~~  159 (249)
                      ..+++|++|.|.-..
T Consensus       176 ~~~~fDlIVsNPPYI  190 (271)
T d1nv8a_         176 KFASIEMILSNPPYV  190 (271)
T ss_dssp             GTTTCCEEEECCCCB
T ss_pred             ccCcccEEEEccccc
Confidence            347899999998754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.43  E-value=0.12  Score=36.74  Aligned_cols=36  Identities=17%  Similarity=0.186  Sum_probs=29.5

Q ss_pred             CCEEEEe-CCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           65 DLTCIVT-GSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        65 ~~~vlIt-Gas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      ++.++|. .+++.||.++|..|+++|++|.++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4555554 46689999999999999999999998753

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=92.38  E-value=0.61  Score=31.25  Aligned_cols=81  Identities=10%  Similarity=0.152  Sum_probs=54.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      ||++||.-...-+...+...|.+.|++|+..+.+.+.+   .+.+.+..      .++.+...++-+.+.+ ++++++++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~~------~dliilD~~mp~~~G~-e~~~~ir~   70 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKELK------PDIVTMDITMPEMNGI-DAIKEIMK   70 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHHC------CSEEEEECSCGGGCHH-HHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhcc------CCEEEEecCCCCCCHH-HHHHHHHH
Confidence            78899999999999999999999999998777665443   33343321      2455554444454433 55666666


Q ss_pred             cCCCccEEEec
Q 025705          145 RLGPLHVLINN  155 (249)
Q Consensus       145 ~~g~id~linn  155 (249)
                      ..+.+-+++..
T Consensus        71 ~~~~~pvi~ls   81 (118)
T d1u0sy_          71 IDPNAKIIVCS   81 (118)
T ss_dssp             HCTTCCEEEEE
T ss_pred             hCCCCcEEEEE
Confidence            66667776664

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.38  E-value=0.12  Score=34.90  Aligned_cols=36  Identities=25%  Similarity=0.281  Sum_probs=31.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      .+++.++|.||+ -+|.++|..|++.|.+|.++.|.+
T Consensus        20 ~~~~~vvVvGgG-~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGGS-KTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHhcchhheEeeccc
Confidence            346888888875 899999999999999999998864

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.29  E-value=0.11  Score=35.01  Aligned_cols=34  Identities=24%  Similarity=0.266  Sum_probs=29.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      +.++|.||+ -+|.++|..|++.|.+|.++.|.+.
T Consensus        23 ~~v~IiGgG-~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGGG-YIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECCC-ccceeeeeeecccccEEEEEEecce
Confidence            678888875 8999999999999999999988753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.21  E-value=0.084  Score=39.22  Aligned_cols=39  Identities=21%  Similarity=0.199  Sum_probs=32.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANEL  105 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~  105 (249)
                      +.+.|.||+ ..|.++|..|++.|++|.+++|+++..++.
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i   46 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLV   46 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence            347788876 599999999999999999999997665443

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.08  E-value=0.34  Score=36.75  Aligned_cols=74  Identities=19%  Similarity=0.104  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +++++|=.|++.|   .++..|+++|++|+.++.++.-++...+++.+.    +  .++.++..|+.+.+.         
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~----~--~~i~~~~~d~~~l~~---------  102 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER----N--LKIEFLQGDVLEIAF---------  102 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----T--CCCEEEESCGGGCCC---------
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc----c--ccchheehhhhhccc---------
Confidence            3468999999887   446678899999999999987666555555441    1  368888888866431         


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                        -+.+|.++..-+
T Consensus       103 --~~~fD~I~~~~~  114 (251)
T d1wzna1         103 --KNEFDAVTMFFS  114 (251)
T ss_dssp             --CSCEEEEEECSS
T ss_pred             --ccccchHhhhhh
Confidence              136898887533

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.07  E-value=0.13  Score=39.14  Aligned_cols=86  Identities=10%  Similarity=-0.016  Sum_probs=60.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|..||-.|+++|--.++..++.....+|+.++++++-++...+.+.+.........++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            4689999999999888888888877889999999998887777666553211001135667777764311          


Q ss_pred             ccCCCccEEEeccccC
Q 025705          144 GRLGPLHVLINNAGIF  159 (249)
Q Consensus       144 ~~~g~id~linnag~~  159 (249)
                      ...+++|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1124799999987753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.05  E-value=0.088  Score=37.52  Aligned_cols=37  Identities=11%  Similarity=0.296  Sum_probs=31.8

Q ss_pred             CCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHH
Q 025705           73 STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKW  109 (249)
Q Consensus        73 as~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~  109 (249)
                      |+|-+|.++++.|.+.|+++++.+|+.++.++..++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            6678999999999999999999999988877665543

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.94  E-value=0.35  Score=34.50  Aligned_cols=86  Identities=13%  Similarity=0.059  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|+.+.|.+.|||.|-.++..+.+.|.++.-.  +    +++.+++++..+......+..-+..+ .+.+...++++.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~----~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~   74 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--E----EKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLL   74 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--C----HHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--C----HHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHH
Confidence            57889999999999999999999999776432  2    34455555555432211122222233 35667777777666


Q ss_pred             ccCCCccEEEeccc
Q 025705          144 GRLGPLHVLINNAG  157 (249)
Q Consensus       144 ~~~g~id~linnag  157 (249)
                      +. +.+|.++....
T Consensus        75 ~d-~~vd~v~v~~~   87 (163)
T d2csua3          75 QD-PNVDMLIAICV   87 (163)
T ss_dssp             HS-TTCSEEEEEEE
T ss_pred             cC-CCcCEEEEeec
Confidence            53 57887665443

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.86  E-value=0.12  Score=35.54  Aligned_cols=33  Identities=21%  Similarity=0.303  Sum_probs=29.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      |.++|.||+ -||.++|..|++.|.+|.++.|+.
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            678888887 699999999999999999999864

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.85  E-value=0.54  Score=35.39  Aligned_cols=79  Identities=15%  Similarity=0.103  Sum_probs=57.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|..||..|+++|--.++.-+++  |.+|+.+.++++-.+...+.+.+. .    ..++.++..|..+-.          
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g----~~nv~~~~gd~~~g~----------  140 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-G----VKNVHVILGDGSKGF----------  140 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-T----CCSEEEEESCGGGCC----------
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-C----CceeEEEECccccCC----------
Confidence            46789999999888888777776  467999999977666666555552 1    247889988886411          


Q ss_pred             ccCCCccEEEeccccC
Q 025705          144 GRLGPLHVLINNAGIF  159 (249)
Q Consensus       144 ~~~g~id~linnag~~  159 (249)
                      ...++.|.++.++++.
T Consensus       141 ~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         141 PPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             cccCcceeEEeecccc
Confidence            1236899999888764

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=91.83  E-value=2.4  Score=33.57  Aligned_cols=82  Identities=11%  Similarity=0.046  Sum_probs=52.4

Q ss_pred             CCCEEEEeCC-CCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGS-TSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGa-s~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +|+.||=..+ +||++.+    ++..|+ .|+.++.++..++-..+.+....-.   ..++.++..|+-      ..++.
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~---~~~~~~i~~d~~------~~l~~  210 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLD---MANHQLVVMDVF------DYFKY  210 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCC---CTTEEEEESCHH------HHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhccc---CcceEEEEccHH------HHHHH
Confidence            4788886664 4555543    445787 7999999988877776666543211   146788888773      22333


Q ss_pred             HhccCCCccEEEecccc
Q 025705          142 WNGRLGPLHVLINNAGI  158 (249)
Q Consensus       142 ~~~~~g~id~linnag~  158 (249)
                      ..+...++|++|...-.
T Consensus       211 ~~~~~~~fD~Ii~DPP~  227 (317)
T d2b78a2         211 ARRHHLTYDIIIIDPPS  227 (317)
T ss_dssp             HHHTTCCEEEEEECCCC
T ss_pred             HHhhcCCCCEEEEcChh
Confidence            33334579999998653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.81  E-value=0.19  Score=37.38  Aligned_cols=82  Identities=11%  Similarity=0.123  Sum_probs=59.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhcc
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~  145 (249)
                      .++=+|-|+||..+++.+.+ . +.+|+.+|++++.++...+.+...      ..++.++..++++...+   ++...  
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~------~~r~~~~~~~f~~~~~~---~~~~~--   92 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF------SDRVSLFKVSYREADFL---LKTLG--   92 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG------TTTEEEEECCGGGHHHH---HHHTT--
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc------cccccchhHHHhhHHHH---HHHcC--
Confidence            34446888899999998887 3 569999999998887776665442      14788999888765433   33321  


Q ss_pred             CCCccEEEeccccCC
Q 025705          146 LGPLHVLINNAGIFS  160 (249)
Q Consensus       146 ~g~id~linnag~~~  160 (249)
                      .+.+|.++...|+++
T Consensus        93 ~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          93 IEKVDGILMDLGVST  107 (192)
T ss_dssp             CSCEEEEEEECSCCH
T ss_pred             CCCcceeeeccchhH
Confidence            358999999999864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.79  E-value=0.044  Score=40.91  Aligned_cols=31  Identities=16%  Similarity=0.275  Sum_probs=27.9

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHcCCEEEEEE
Q 025705           66 LTCIVTGSTSGIGR-----EIARQLAESGAHVVMAV   96 (249)
Q Consensus        66 ~~vlItGas~gIG~-----~ia~~l~~~G~~Vil~~   96 (249)
                      |..+|||.++|.|+     .+|..|+++|.+|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            67899999999998     47889999999999986

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.72  E-value=0.13  Score=38.98  Aligned_cols=32  Identities=34%  Similarity=0.347  Sum_probs=28.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      |.|+|.||+ -.|...|.+|+++|++|.+++|+
T Consensus         7 ~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           7 KRVVVLGSG-VIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCC
Confidence            568888875 78999999999999999999985

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.71  E-value=0.35  Score=35.98  Aligned_cols=39  Identities=21%  Similarity=0.137  Sum_probs=34.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ...+.||++.|.|.+ .||+.+|+.+...|++|+..++..
T Consensus        40 ~~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          40 GKELGQQTVGVMGTG-HIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceeeeeeecc-cccccccccccccceeeeccCCcc
Confidence            357889999999865 799999999999999999998864

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.55  E-value=0.46  Score=37.57  Aligned_cols=35  Identities=31%  Similarity=0.347  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV   96 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~   96 (249)
                      ++++|++++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4789999999986 6899999999999999998775

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.37  E-value=0.12  Score=35.17  Aligned_cols=33  Identities=39%  Similarity=0.478  Sum_probs=28.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +.++|.||+ -+|.++|..|++.|.+|.++.|++
T Consensus        33 ~~vvIiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIGGG-FIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEECS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECCc-HHHHHHHHHhhcccceEEEEeccc
Confidence            567777765 899999999999999999998864

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.24  E-value=0.61  Score=34.36  Aligned_cols=75  Identities=15%  Similarity=-0.033  Sum_probs=53.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +.+||=.|+++|.   ++..|++.|++|+.+|.+++-++...+.+....      .++..+..|..+..          .
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~------~~~~~~~~d~~~l~----------~   98 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDARKLS----------F   98 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTTSCC----------S
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc------cccccccccccccc----------c
Confidence            4678999998877   667888899999999999877766665555421      35667777876532          1


Q ss_pred             cCCCccEEEecccc
Q 025705          145 RLGPLHVLINNAGI  158 (249)
Q Consensus       145 ~~g~id~linnag~  158 (249)
                      ..+.+|+++.+..+
T Consensus        99 ~~~~fD~I~~~~~l  112 (226)
T d1ve3a1          99 EDKTFDYVIFIDSI  112 (226)
T ss_dssp             CTTCEEEEEEESCG
T ss_pred             cCcCceEEEEecch
Confidence            12468998877543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.21  E-value=0.21  Score=36.61  Aligned_cols=38  Identities=24%  Similarity=0.263  Sum_probs=32.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +...+|.|+|.||+ --|.+.|..|+++|++|.++.+++
T Consensus        39 ~~~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccC
Confidence            34567899999976 678999999999999999999864

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.20  E-value=0.55  Score=37.33  Aligned_cols=76  Identities=14%  Similarity=0.191  Sum_probs=50.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .+|++||-.|++.|+   ++..+++.|+ +|+.++.++. .....+.+..    .+...++.++..|+.+.+.       
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~----n~~~~~v~~~~~~~~~~~~-------   96 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKA----NKLDHVVTIIKGKVEEVEL-------   96 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHH----TTCTTTEEEEESCTTTCCC-------
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHH----hCCccccceEeccHHHccc-------
Confidence            468999999998885   5667788887 6989998754 3333333332    2233578888888876431       


Q ss_pred             HhccCCCccEEEecc
Q 025705          142 WNGRLGPLHVLINNA  156 (249)
Q Consensus       142 ~~~~~g~id~linna  156 (249)
                         ....+|+++...
T Consensus        97 ---~~~~~D~ivs~~  108 (316)
T d1oria_          97 ---PVEKVDIIISEW  108 (316)
T ss_dssp             ---SSSCEEEEEECC
T ss_pred             ---ccceeEEEeeee
Confidence               124688888753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.94  E-value=0.16  Score=34.58  Aligned_cols=33  Identities=18%  Similarity=0.193  Sum_probs=29.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      |.++|.||+ -||.++|..|++.|++|.++.+++
T Consensus        24 ~~~vIiG~G-~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGGG-IIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECCC-chHHHHHHHHHhhCcceeEEEecc
Confidence            678888875 899999999999999999998864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.90  E-value=0.15  Score=34.59  Aligned_cols=33  Identities=18%  Similarity=0.136  Sum_probs=29.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +.++|.||+ -+|.++|..|++.|.+|.++.|..
T Consensus        23 ~~v~IiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVGSG-YIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEECCc-hHHHHHHHHHHhccccceeeehhc
Confidence            678888775 899999999999999999999864

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.82  E-value=3  Score=32.88  Aligned_cols=82  Identities=13%  Similarity=0.001  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGST-SGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas-~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +++.||=..+. |+++.+    ++..|++|+.++.+...++...+.+....-.   ..++.++..|+.      +++++.
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~---~~~~~~i~~D~~------~~l~~~  198 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLE---QAPIRWICEDAM------KFIQRE  198 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCT---TSCEEEECSCHH------HHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhccc---CCcEEEEeCCHH------HhHHHH
Confidence            45778866654 444443    4567999999999988777666655442111   135778877763      223333


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                      ...-.++|++|.+.-.
T Consensus       199 ~~~~~~fD~IilDPP~  214 (309)
T d2igta1         199 ERRGSTYDIILTDPPK  214 (309)
T ss_dssp             HHHTCCBSEEEECCCS
T ss_pred             hhcCCCCCEEEECCCc
Confidence            3333579999998553

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.74  E-value=0.21  Score=33.86  Aligned_cols=33  Identities=27%  Similarity=0.143  Sum_probs=29.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +.++|.||+ -||.++|..|++.|.+|.++.++.
T Consensus        23 ~~i~IiG~G-~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIGAG-VIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECCC-hHHHHHHHHHHHcCCceEEEEeec
Confidence            668888875 899999999999999999998764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.63  E-value=0.13  Score=39.49  Aligned_cols=33  Identities=21%  Similarity=0.154  Sum_probs=27.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      +|.|+|.||+ -=|...|.+|++.|++|.++.++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCC
Confidence            5788899876 56788899999999999999865

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.52  E-value=0.19  Score=33.83  Aligned_cols=33  Identities=21%  Similarity=0.125  Sum_probs=28.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      |.++|.||+ -+|.++|..|.+.|.+|.++.|.+
T Consensus        22 ~~vvIiGgG-~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGAG-YIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECCC-hhhHHHHHHhhccccEEEEEeecc
Confidence            567777764 899999999999999999998864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.20  E-value=0.16  Score=34.65  Aligned_cols=33  Identities=21%  Similarity=0.228  Sum_probs=29.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +.++|.||+ -||.++|..|.+.|.+|.++.|++
T Consensus        26 ~~~viiG~G-~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          26 KKLVVIGAG-YIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SEEEESCCS-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEccc-hHHHHHHHHHHhcCCeEEEEEEcc
Confidence            678888875 899999999999999999998875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.10  E-value=0.2  Score=33.68  Aligned_cols=33  Identities=24%  Similarity=0.274  Sum_probs=28.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +.++|.|| |-+|.++|..|++.|.+|.++.+.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            56777765 4899999999999999999998864

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.93  E-value=0.64  Score=35.17  Aligned_cols=75  Identities=19%  Similarity=-0.028  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|..||-.|+++|--.   ..|++.+.+|+.++++++..+...+.+.+       ..++.++..|..+-.          
T Consensus        70 ~g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A~~~~~~-------~~nv~~~~~d~~~g~----------  129 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYASKLLSY-------YNNIKLILGDGTLGY----------  129 (224)
T ss_dssp             TTCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHHHHHHTT-------CSSEEEEESCGGGCC----------
T ss_pred             ccceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHHHHHHhc-------ccccccccCchhhcc----------
Confidence            5678999999888543   34566677999999988766555433222       146788888875311          


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                      ...+++|.++.+++.
T Consensus       130 ~~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         130 EEEKPYDRVVVWATA  144 (224)
T ss_dssp             GGGCCEEEEEESSBB
T ss_pred             hhhhhHHHHHhhcch
Confidence            112579999988775

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.89  E-value=0.14  Score=39.50  Aligned_cols=31  Identities=26%  Similarity=0.299  Sum_probs=26.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      |+|.||+ -.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGaG-i~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGGG-IIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCC
Confidence            6777764 899999999999999999998854

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.79  E-value=0.25  Score=34.13  Aligned_cols=34  Identities=26%  Similarity=0.306  Sum_probs=29.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ++.++|.||+ -+|.++|..|++.|.+|.++.+.+
T Consensus        35 ~k~v~VIGgG-~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGGG-YIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECCc-hHHHHHHHHHHhhCcceeeeeecc
Confidence            4778888765 899999999999999999998864

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.74  E-value=0.13  Score=38.73  Aligned_cols=34  Identities=15%  Similarity=0.327  Sum_probs=30.0

Q ss_pred             CCEEEEeCCCCchHH-----HHHHHHHHcCCEEEEEEcC
Q 025705           65 DLTCIVTGSTSGIGR-----EIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        65 ~~~vlItGas~gIG~-----~ia~~l~~~G~~Vil~~r~   98 (249)
                      +|++.|+|+-||.|+     .+|..|+++|.+|+++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            688999999999998     4788899999999999854

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.70  E-value=0.22  Score=38.73  Aligned_cols=35  Identities=26%  Similarity=0.302  Sum_probs=31.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV   96 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~   96 (249)
                      .+++|++++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468899999998 68999999999999999988764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.69  E-value=0.2  Score=34.18  Aligned_cols=32  Identities=31%  Similarity=0.337  Sum_probs=27.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      +.++|.||+ -||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGgG-~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGAS-YVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECCS-HHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECCC-ccHHHHHHHHhhcCCeEEEEEec
Confidence            457777765 89999999999999999999876

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.62  E-value=0.71  Score=33.18  Aligned_cols=78  Identities=14%  Similarity=0.127  Sum_probs=45.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|+++|=.|+++|.   ++.+++.+|++|+.++.+++..+...+.++..    +...++...     +.+..   .....
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~----~~~~~v~~~-----~~d~~---~~~~~  105 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRT----GLGARVVAL-----PVEVF---LPEAK  105 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH----TCCCEEECS-----CHHHH---HHHHH
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhh----ccccceeee-----ehhcc---ccccc
Confidence            45777766655542   33456678999999999988877666665542    111233222     22222   22222


Q ss_pred             ccCCCccEEEecc
Q 025705          144 GRLGPLHVLINNA  156 (249)
Q Consensus       144 ~~~g~id~linna  156 (249)
                      ....++|+++.+.
T Consensus       106 ~~~~~fD~If~DP  118 (171)
T d1ws6a1         106 AQGERFTVAFMAP  118 (171)
T ss_dssp             HTTCCEEEEEECC
T ss_pred             ccCCccceeEEcc
Confidence            2334799998874

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.58  E-value=0.2  Score=43.29  Aligned_cols=34  Identities=15%  Similarity=0.258  Sum_probs=28.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEc
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVR   97 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r   97 (249)
                      +.+.+|+|.|+ ||+|.++++-|+..|. ++.++|.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            34478999987 7999999999999998 7888865

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.43  E-value=1.4  Score=31.97  Aligned_cols=76  Identities=21%  Similarity=0.178  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      .++.||=.|++.|.   .+..|+++|++|+.++.++..++...+...+.    +. ..+.+...|+.+...         
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~----~~-~~~~~~~~d~~~~~~---------   92 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE----GL-DNLQTDLVDLNTLTF---------   92 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TC-TTEEEEECCTTTCCC---------
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc----cc-cchhhhheecccccc---------
Confidence            44679999987554   45688899999999999988777665554442    11 246777778765431         


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                        -+.+|+++.+.-.
T Consensus        93 --~~~fD~I~~~~~~  105 (198)
T d2i6ga1          93 --DGEYDFILSTVVM  105 (198)
T ss_dssp             --CCCEEEEEEESCG
T ss_pred             --cccccEEEEeeee
Confidence              1368988876543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.34  E-value=0.45  Score=36.03  Aligned_cols=86  Identities=12%  Similarity=-0.054  Sum_probs=55.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHH-HcC----CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLA-ESG----AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRF  138 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~-~~G----~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~  138 (249)
                      +|..||..|+++|--.++..+++ ..|    .+|+.+.++++-.+...+.+...........++.++..|..+-.     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            56899999988887776666655 445    47999999987666655544332110000136788888875321     


Q ss_pred             HHHHhccCCCccEEEeccccC
Q 025705          139 SEAWNGRLGPLHVLINNAGIF  159 (249)
Q Consensus       139 ~~~~~~~~g~id~linnag~~  159 (249)
                           ...+++|.++.+++..
T Consensus       155 -----~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             -----GGGCSEEEEEECSCBS
T ss_pred             -----ccccceeeEEEEeech
Confidence                 1235799999888763

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.34  E-value=2.3  Score=29.36  Aligned_cols=85  Identities=11%  Similarity=0.034  Sum_probs=53.1

Q ss_pred             CCEEEEeCCC---CchHHHHHHHHHHcCCEEEEEEcChHHHHH--HHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHH
Q 025705           65 DLTCIVTGST---SGIGREIARQLAESGAHVVMAVRNLKAANE--LIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFS  139 (249)
Q Consensus        65 ~~~vlItGas---~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~  139 (249)
                      -|.+.|.|+|   +..|..+++.|.+.|++|+.+..+.+....  ....+.+ .+     ..+..+. =+...+.+.+++
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~d-lp-----~~iD~v~-i~vp~~~~~~~~   91 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLD-IP-----DKIEVVD-LFVKPKLTMEYV   91 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-CS-----SCCSEEE-ECSCHHHHHHHH
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccc-cC-----ccceEEE-EEeCHHHHHHHH
Confidence            3889999999   589999999999999999888654321100  0000000 00     1122211 124577888888


Q ss_pred             HHHhccCCCccEEEecccc
Q 025705          140 EAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       140 ~~~~~~~g~id~linnag~  158 (249)
                      +++.+.  ++..++...|.
T Consensus        92 ~e~~~~--g~k~v~~~~G~  108 (139)
T d2d59a1          92 EQAIKK--GAKVVWFQYNT  108 (139)
T ss_dssp             HHHHHH--TCSEEEECTTC
T ss_pred             HHHHHh--CCCEEEEeccc
Confidence            888775  46777777774

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.31  E-value=0.24  Score=34.98  Aligned_cols=35  Identities=14%  Similarity=0.235  Sum_probs=28.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHH
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAAN  103 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~  103 (249)
                      +-|. |.|-+|..+|+.|+++|++|+..+++..+..
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            3444 4589999999999999999999887765543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.24  E-value=0.19  Score=36.49  Aligned_cols=34  Identities=15%  Similarity=0.104  Sum_probs=28.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcCh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNL   99 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~   99 (249)
                      +|.|+|.||+ -.|...|..|+++|+ +|.++.|+.
T Consensus         4 ~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAG-PASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecC
Confidence            4778888875 789999999999999 598988764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.04  E-value=0.22  Score=39.41  Aligned_cols=32  Identities=22%  Similarity=0.283  Sum_probs=23.8

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHcCCEEEEEEcC
Q 025705           66 LTCIVTGSTSGIGR-----EIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        66 ~~vlItGas~gIG~-----~ia~~l~~~G~~Vil~~r~   98 (249)
                      |.++|++|++| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45666665545 65     6999999999999887654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.93  E-value=0.31  Score=36.78  Aligned_cols=42  Identities=14%  Similarity=0.095  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQK  108 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~  108 (249)
                      .++.||..|++.|   ..+..|+++|++|+.+|.+++..+...++
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~   86 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTE   86 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            5678999999887   45888899999999999998776655444

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=88.75  E-value=0.44  Score=35.18  Aligned_cols=39  Identities=13%  Similarity=0.116  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      ..+.|+++.|.|.+ .||+.+|+.+...|++|+..++...
T Consensus        43 ~~l~g~tvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGFG-SIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEeecc-cchHHHHHHHHhhcccccccccccc
Confidence            46789999999865 8999999999999999999987543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.68  E-value=0.45  Score=35.83  Aligned_cols=37  Identities=30%  Similarity=0.348  Sum_probs=31.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      +...+|.|+|.||+ --|...|..|+++|++|.++.++
T Consensus        45 ~~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          45 QTKNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             CCSSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cccCCceEEEEccc-HHHHHHHHHHHHhccceeeEeec
Confidence            34567899999987 55889999999999999999864

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=88.64  E-value=0.55  Score=33.72  Aligned_cols=39  Identities=15%  Similarity=0.270  Sum_probs=34.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHH
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKA  101 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~  101 (249)
                      .+.||+++|.|= |-+|+.+|+++...|++|+++..+|-+
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            468899999874 479999999999999999999999854

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.56  E-value=1.3  Score=35.13  Aligned_cols=75  Identities=17%  Similarity=0.187  Sum_probs=49.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|++||-.|++.|+   ++..+++.|+ +|+.++.++ .++...+..++    .+...++.++..|+.+.+         
T Consensus        38 ~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~----~~~~~~i~~i~~~~~~l~---------  100 (328)
T d1g6q1_          38 KDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVEL----NGFSDKITLLRGKLEDVH---------  100 (328)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHH----TTCTTTEEEEESCTTTSC---------
T ss_pred             CcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHH----hCccccceEEEeehhhcc---------
Confidence            57999999998874   4667778897 788888875 33333333333    233357888888887642         


Q ss_pred             hccCCCccEEEecc
Q 025705          143 NGRLGPLHVLINNA  156 (249)
Q Consensus       143 ~~~~g~id~linna  156 (249)
                       ..-..+|+++...
T Consensus       101 -~~~~~~D~i~se~  113 (328)
T d1g6q1_         101 -LPFPKVDIIISEW  113 (328)
T ss_dssp             -CSSSCEEEEEECC
T ss_pred             -CcccceeEEEEEe
Confidence             0113688888754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.52  E-value=0.17  Score=39.36  Aligned_cols=37  Identities=24%  Similarity=0.365  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCCCchHHHH-----HHHHHHcCCEEEEEEcChH
Q 025705           64 NDLTCIVTGSTSGIGREI-----ARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~i-----a~~l~~~G~~Vil~~r~~~  100 (249)
                      .++.++|+.|=||.|+..     |..|+++|.+|+++|-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            456777887799999964     8999999999999998864

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.45  E-value=0.32  Score=37.45  Aligned_cols=34  Identities=26%  Similarity=0.371  Sum_probs=30.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEE
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAV   96 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~   96 (249)
                      +++|++|+|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            68899999997 77999999999999999998765

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.15  E-value=0.32  Score=33.23  Aligned_cols=33  Identities=15%  Similarity=0.125  Sum_probs=29.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      +.++|.||+ -||.++|..|.+.|.+|.++.+.+
T Consensus        27 ~~vvIiGgG-~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          27 GKLLIIGGG-IIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             SEEEEESCS-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECCC-HHHHHHHHHhhcCCCEEEEEEeec
Confidence            678888875 899999999999999999998754

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.07  E-value=3.2  Score=29.43  Aligned_cols=35  Identities=6%  Similarity=-0.071  Sum_probs=23.9

Q ss_pred             EEEEeCC-CCchHHHHHHHHHHcC----CEEEEEEcChHH
Q 025705           67 TCIVTGS-TSGIGREIARQLAESG----AHVVMAVRNLKA  101 (249)
Q Consensus        67 ~vlItGa-s~gIG~~ia~~l~~~G----~~Vil~~r~~~~  101 (249)
                      .+.|.|| +.|.+..++.-+....    .+++++|.++++
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            3566675 5677777776666532    389999998754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.70  E-value=0.35  Score=34.21  Aligned_cols=35  Identities=17%  Similarity=0.189  Sum_probs=29.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEEcCh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA--HVVMAVRNL   99 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~--~Vil~~r~~   99 (249)
                      .||.++|.||+ -.|..+|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            47899999987 679999999999885  788887654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.54  E-value=0.36  Score=37.56  Aligned_cols=35  Identities=23%  Similarity=0.242  Sum_probs=29.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ..|.|+|.||+ --|...|.+|+++|++|.++.++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            44789999886 458899999999999999998753

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.50  E-value=0.18  Score=37.84  Aligned_cols=34  Identities=24%  Similarity=0.402  Sum_probs=29.2

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHcCCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGR-----EIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~-----~ia~~l~~~G~~Vil~~r~~   99 (249)
                      |++.|+++-||.|+     .+|..|+++|.+|.++|-++
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            67899999999998     46788999999999998653

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.39  E-value=3.8  Score=29.41  Aligned_cols=80  Identities=13%  Similarity=0.128  Sum_probs=52.6

Q ss_pred             CCCCEEEEeC-CCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHH
Q 025705           63 VNDLTCIVTG-STSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSE  140 (249)
Q Consensus        63 ~~~~~vlItG-as~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~  140 (249)
                      .+|+.+|=.. |+|++|.+    .+.+|+ +|+.++.+.+..+...+.+....    ...++.++..|+.      ++++
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~----~~~~~~i~~~D~~------~~l~  105 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITK----EPEKFEVRKMDAN------RALE  105 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHT----CGGGEEEEESCHH------HHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhh----cccccccccccch------hhhh
Confidence            5678887655 55667764    556888 69999999887777666665432    2246778877774      2334


Q ss_pred             HHhccCCCccEEEecc
Q 025705          141 AWNGRLGPLHVLINNA  156 (249)
Q Consensus       141 ~~~~~~g~id~linna  156 (249)
                      +......++|+++...
T Consensus       106 ~~~~~~~~fDlIflDP  121 (182)
T d2fhpa1         106 QFYEEKLQFDLVLLDP  121 (182)
T ss_dssp             HHHHTTCCEEEEEECC
T ss_pred             hhcccCCCcceEEech
Confidence            4433334799998764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.35  E-value=1.6  Score=32.24  Aligned_cols=77  Identities=10%  Similarity=-0.040  Sum_probs=51.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHhc
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWNG  144 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~  144 (249)
                      +..||=.|++.|.-   +..++++|++|+.++.+++-++...+.+.+..     ..++.++.+|..+...          
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-----~~~i~~~~~d~~~l~~----------   77 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-----HQQVEYVQGDAEQMPF----------   77 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCC-CCCS----------
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-----cccccccccccccccc----------
Confidence            57899999888854   45677889999999999877666554444421     1367788888766420          


Q ss_pred             cCCCccEEEeccccC
Q 025705          145 RLGPLHVLINNAGIF  159 (249)
Q Consensus       145 ~~g~id~linnag~~  159 (249)
                      ..+.+|+++.+....
T Consensus        78 ~~~~fD~v~~~~~l~   92 (231)
T d1vl5a_          78 TDERFHIVTCRIAAH   92 (231)
T ss_dssp             CTTCEEEEEEESCGG
T ss_pred             ccccccccccccccc
Confidence            124688887776553

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=87.03  E-value=0.42  Score=36.17  Aligned_cols=34  Identities=24%  Similarity=0.176  Sum_probs=28.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      .+.|+|.||+ =-|..+|..|+++|++|+++.|+.
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4668888876 567788889999999999998864

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.69  E-value=0.29  Score=37.72  Aligned_cols=30  Identities=27%  Similarity=0.397  Sum_probs=25.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      |+|.||+ -.|..+|.+|+++|.+|+++++.
T Consensus         6 vvIIGaG-i~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAG-SMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCC
Confidence            6777654 78999999999999999999874

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.39  E-value=2.6  Score=31.84  Aligned_cols=34  Identities=24%  Similarity=0.296  Sum_probs=29.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEE
Q 025705           62 PVNDLTCIVTGSTSGIGREIARQLAE-SGAHVVMAV   96 (249)
Q Consensus        62 ~~~~~~vlItGas~gIG~~ia~~l~~-~G~~Vil~~   96 (249)
                      +++|++++|-| .|-+|..+|+.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            57899998886 77999999999975 599988765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.19  E-value=0.34  Score=35.72  Aligned_cols=31  Identities=19%  Similarity=0.165  Sum_probs=26.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           68 CIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      |+|.|| |--|...|.+|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788884 4778999999999999999998864

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.15  E-value=2.7  Score=30.30  Aligned_cols=78  Identities=19%  Similarity=0.078  Sum_probs=52.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      .++++||=.|+++|   .++..+++.+.+|..++.++...+...+.++...-   ...++.++..|+.+.-         
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l---~~~~i~~~~~d~~~~~---------  115 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNL---DNYDIRVVHSDLYENV---------  115 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC---TTSCEEEEECSTTTTC---------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCC---ccceEEEEEcchhhhh---------
Confidence            35688998997766   33455667788999999998777666655544211   1246888888886421         


Q ss_pred             hccCCCccEEEeccc
Q 025705          143 NGRLGPLHVLINNAG  157 (249)
Q Consensus       143 ~~~~g~id~linnag  157 (249)
                      .  -+.+|+++.|.-
T Consensus       116 ~--~~~fD~Ii~~~p  128 (194)
T d1dusa_         116 K--DRKYNKIITNPP  128 (194)
T ss_dssp             T--TSCEEEEEECCC
T ss_pred             c--cCCceEEEEccc
Confidence            1  136999998854

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=86.15  E-value=1.9  Score=33.49  Aligned_cols=77  Identities=16%  Similarity=0.132  Sum_probs=53.2

Q ss_pred             CCEEEEeC-CCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           65 DLTCIVTG-STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        65 ~~~vlItG-as~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +..++=.| |||-||.+++..+  ..++|+.+|.++..++-+.+.++...    . .++.++..|+.+.-         .
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~----~-~~v~~~~~d~~~~~---------~  172 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA----I-KNIHILQSDWFSAL---------A  172 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT----C-CSEEEECCSTTGGG---------T
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC----c-ccceeeeccccccc---------C
Confidence            34577677 5566777777654  45799999999988877766665532    1 25889999986542         1


Q ss_pred             ccCCCccEEEeccccC
Q 025705          144 GRLGPLHVLINNAGIF  159 (249)
Q Consensus       144 ~~~g~id~linnag~~  159 (249)
                        ..++|++|.|.-..
T Consensus       173 --~~~fDlIvsNPPYi  186 (274)
T d2b3ta1         173 --GQQFAMIVSNPPYI  186 (274)
T ss_dssp             --TCCEEEEEECCCCB
T ss_pred             --CCceeEEEecchhh
Confidence              13799999997654

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=85.68  E-value=2.4  Score=32.49  Aligned_cols=78  Identities=14%  Similarity=0.077  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++.+||=.|++.|.   ++..|+++ |++|+.++-++.-++...+.+...    +...++.++.+|..+...        
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~----gl~~~v~~~~~d~~~l~~--------  131 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA----GLADNITVKYGSFLEIPC--------  131 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH----TCTTTEEEEECCTTSCSS--------
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccc----cccccccccccccccccc--------
Confidence            46789999987663   34445544 899999999987766665555442    223478888888866320        


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                        ..+.+|+++.+-..
T Consensus       132 --~~~sfD~V~~~~~l  145 (282)
T d2o57a1         132 --EDNSYDFIWSQDAF  145 (282)
T ss_dssp             --CTTCEEEEEEESCG
T ss_pred             --cccccchhhccchh
Confidence              12468988776444

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.58  E-value=1.3  Score=32.91  Aligned_cols=67  Identities=18%  Similarity=0.155  Sum_probs=44.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHH
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDS  134 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  134 (249)
                      .+--+|.+||=.|+++|.-......+...| .|+.++.+++.++...+..++.       .++..+..|..+.+.
T Consensus        52 l~lkpg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-------~ni~~i~~d~~~~~~  118 (209)
T d1nt2a_          52 LKLRGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-------NNIIPLLFDASKPWK  118 (209)
T ss_dssp             CCCCSSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-------SSEEEECSCTTCGGG
T ss_pred             CCCCCCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-------CCceEEEeeccCccc
Confidence            444568899999988775443333333444 8999999998887776665441       256677777776543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.28  E-value=0.39  Score=37.47  Aligned_cols=30  Identities=17%  Similarity=0.380  Sum_probs=26.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEEcC
Q 025705           68 CIVTGSTSGIGREIARQLAESGA-HVVMAVRN   98 (249)
Q Consensus        68 vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~   98 (249)
                      |+|.||+ -+|.++|.+|+++|. +|++++|+
T Consensus         4 ViIIGaG-i~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGAG-IVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECcC-HHHHHHHHHHHHcCCCcEEEEeCC
Confidence            7788775 899999999999997 69999876

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=85.13  E-value=0.24  Score=38.24  Aligned_cols=34  Identities=21%  Similarity=0.387  Sum_probs=27.9

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHcCCEEEEEEcChH
Q 025705           66 LTCIVTGSTSGIGRE-----IARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        66 ~~vlItGas~gIG~~-----ia~~l~~~G~~Vil~~r~~~  100 (249)
                      |++.|+| =||.|+.     +|..|+++|.+|.++|-+++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5677887 8888884     67799999999999998753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=84.97  E-value=3.1  Score=29.12  Aligned_cols=43  Identities=21%  Similarity=0.166  Sum_probs=30.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCEEEEE--EcChHHHHHHHHH
Q 025705           66 LTCIVTGSTSGIGREIARQLAES--GAHVVMA--VRNLKAANELIQK  108 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~--G~~Vil~--~r~~~~~~~~~~~  108 (249)
                      |.+.|-|+||.||.....-..+.  .++|+.+  .+|.+.+.+...+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~   48 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLE   48 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHH
Confidence            56899999999999988877775  4677654  3454444444433

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.75  E-value=0.59  Score=37.07  Aligned_cols=34  Identities=29%  Similarity=0.335  Sum_probs=28.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           65 DLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        65 ~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      .|.++|.||+ --|..+|.+|+++|++|.++.++.
T Consensus         2 ~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCC
Confidence            5788999876 567888999999999999998764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=84.62  E-value=2.3  Score=31.57  Aligned_cols=77  Identities=10%  Similarity=-0.019  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHHh
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAWN  143 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~  143 (249)
                      +|.+||=.|++.|.   ++..|+++|.+|+.+|.++.-++...+.+.+...     .++.++..|+.+.. .        
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~-----~~~~~~~~d~~~~~-~--------   78 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGV-----ENVRFQQGTAESLP-F--------   78 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTC-----CSEEEEECBTTBCC-S--------
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccc-----cccccccccccccc-c--------
Confidence            46789999988874   3456677889999999998777666555554311     25778888876532 0        


Q ss_pred             ccCCCccEEEecccc
Q 025705          144 GRLGPLHVLINNAGI  158 (249)
Q Consensus       144 ~~~g~id~linnag~  158 (249)
                       ..+.+|.++.+-.+
T Consensus        79 -~~~~fD~v~~~~~l   92 (234)
T d1xxla_          79 -PDDSFDIITCRYAA   92 (234)
T ss_dssp             -CTTCEEEEEEESCG
T ss_pred             -cccccceeeeecee
Confidence             01467877665443

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.50  E-value=0.8  Score=30.54  Aligned_cols=33  Identities=18%  Similarity=0.190  Sum_probs=26.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc---CCEEEEEEcCh
Q 025705           66 LTCIVTGSTSGIGREIARQLAES---GAHVVMAVRNL   99 (249)
Q Consensus        66 ~~vlItGas~gIG~~ia~~l~~~---G~~Vil~~r~~   99 (249)
                      +.++|.|| |.+|.++|..|.+.   |.+|.++.|.+
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            67888888 69999999776654   45799988764

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=83.93  E-value=3.5  Score=30.72  Aligned_cols=77  Identities=14%  Similarity=0.023  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAE-SGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~-~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      +|+.||=.|++.|   .++..+++ .|++|+.++-++.-.+...+...+.    +...++.+...|+.+..         
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~----gl~~~v~~~~~d~~~~~---------   96 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEEL----GVSERVHFIHNDAAGYV---------   96 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHT----TCTTTEEEEESCCTTCC---------
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHh----hccccchhhhhHHhhcc---------
Confidence            4788999998777   23445555 4899999999987665554444332    23346888888887531         


Q ss_pred             hccCCCccEEEecccc
Q 025705          143 NGRLGPLHVLINNAGI  158 (249)
Q Consensus       143 ~~~~g~id~linnag~  158 (249)
                        .-+++|.++..-..
T Consensus        97 --~~~~fD~v~~~~~~  110 (245)
T d1nkva_          97 --ANEKCDVAACVGAT  110 (245)
T ss_dssp             --CSSCEEEEEEESCG
T ss_pred             --ccCceeEEEEEehh
Confidence              01468877766444

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=83.61  E-value=0.92  Score=28.92  Aligned_cols=66  Identities=14%  Similarity=0.076  Sum_probs=42.5

Q ss_pred             EEEeCCCCchHH-HHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEE-ccCCCHHHHHHHHHHHhcc
Q 025705           68 CIVTGSTSGIGR-EIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAME-LDLLSLDSVVRFSEAWNGR  145 (249)
Q Consensus        68 vlItGas~gIG~-~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~v~~~~~~~~~~  145 (249)
                      +.+.| -+|+|. ++|+.|.++|+.|...|+.+...   .+++++.        .+.+.. -|..+              
T Consensus         4 ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~---t~~L~~~--------Gi~i~~gh~~~~--------------   57 (89)
T d1j6ua1           4 IHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETER---TAYLRKL--------GIPIFVPHSADN--------------   57 (89)
T ss_dssp             EEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHT--------TCCEESSCCTTS--------------
T ss_pred             EEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChh---HHHHHHC--------CCeEEeeecccc--------------
Confidence            45554 457777 58999999999999999886433   3345442        222322 22222              


Q ss_pred             CCCccEEEeccccC
Q 025705          146 LGPLHVLINNAGIF  159 (249)
Q Consensus       146 ~g~id~linnag~~  159 (249)
                      ....|.+|...++.
T Consensus        58 i~~~d~vV~SsAI~   71 (89)
T d1j6ua1          58 WYDPDLVIKTPAVR   71 (89)
T ss_dssp             CCCCSEEEECTTCC
T ss_pred             cCCCCEEEEecCcC
Confidence            13689999998875

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.41  E-value=0.7  Score=34.20  Aligned_cols=37  Identities=22%  Similarity=0.265  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcC
Q 025705           61 PPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRN   98 (249)
Q Consensus        61 ~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~   98 (249)
                      .+++||.|+|.|++. =|..+|..+++.+++++.+.|+
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccc
Confidence            468999999998774 3899999999999998888775

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=83.03  E-value=0.33  Score=32.11  Aligned_cols=39  Identities=13%  Similarity=0.137  Sum_probs=32.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEEcCh
Q 025705           60 LPPVNDLTCIVTGSTSGIGREIARQLAESGAHVVMAVRNL   99 (249)
Q Consensus        60 ~~~~~~~~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~   99 (249)
                      ..+++||.|+|.|++ -=|..+|..|++.+.++++..|+.
T Consensus        27 ~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          27 PELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            346889999999987 567889999999888888777764

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=82.96  E-value=2.7  Score=32.06  Aligned_cols=78  Identities=13%  Similarity=0.124  Sum_probs=54.1

Q ss_pred             CCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           63 VNDLTCIVTGSTSG-IGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        63 ~~~~~vlItGas~g-IG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      -+|.+||=.|+++| +...+|+.+.. +.+|+.++++++.++...+.+.+..    ...++.+...|+.+.-        
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~----~~~nv~~~~~Di~~~~--------  150 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFY----DIGNVRTSRSDIADFI--------  150 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTS----CCTTEEEECSCTTTCC--------
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhc----CCCceEEEEeeeeccc--------
Confidence            35789999997765 56666666544 3489999999988877777766532    2247888888886531        


Q ss_pred             HhccCCCccEEEecc
Q 025705          142 WNGRLGPLHVLINNA  156 (249)
Q Consensus       142 ~~~~~g~id~linna  156 (249)
                       .  -..+|.++.+.
T Consensus       151 -~--~~~fD~V~ld~  162 (250)
T d1yb2a1         151 -S--DQMYDAVIADI  162 (250)
T ss_dssp             -C--SCCEEEEEECC
T ss_pred             -c--cceeeeeeecC
Confidence             1  13689888753

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.96  E-value=0.8  Score=31.37  Aligned_cols=77  Identities=13%  Similarity=0.122  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCC----------chHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHH
Q 025705           64 NDLTCIVTGSTS----------GIGREIARQLAESGAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLD  133 (249)
Q Consensus        64 ~~~~vlItGas~----------gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  133 (249)
                      +.|.|+|.|++.          --+.+.++.|.+.|++++++..|++...-..+          ...+   +.++--..+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d----------~aD~---lYfePlt~e   72 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE----------MADA---TYIEPIHWE   72 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG----------GSSE---EECSCCCHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh----------hcce---eeeecCCHH
Confidence            447899999753          34568889999999999999988765321110          0012   223444577


Q ss_pred             HHHHHHHHHhccCCCccEEEecccc
Q 025705          134 SVVRFSEAWNGRLGPLHVLINNAGI  158 (249)
Q Consensus       134 ~v~~~~~~~~~~~g~id~linnag~  158 (249)
                      .+.+++++-     ++|.++-..|.
T Consensus        73 ~v~~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          73 VVRKIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHHHHh-----CcCCeEEEeee
Confidence            888877763     78988877664

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.72  E-value=0.57  Score=36.14  Aligned_cols=33  Identities=18%  Similarity=0.259  Sum_probs=29.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEEcChH
Q 025705           67 TCIVTGSTSGIGREIARQLAESGAHVVMAVRNLK  100 (249)
Q Consensus        67 ~vlItGas~gIG~~ia~~l~~~G~~Vil~~r~~~  100 (249)
                      .|+|.||+ =.|..+|..|+++|.+|+++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            37888887 7899999999999999999998864

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=82.35  E-value=5.6  Score=28.39  Aligned_cols=75  Identities=11%  Similarity=0.145  Sum_probs=47.4

Q ss_pred             CCCEEEEeCC-CCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGS-TSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGa-s~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      .++++|=.+| +|.+|.    +.+.+|+ +|+.++.+.+..+...+.+... .    ..++.++..|+.         +.
T Consensus        43 ~~~~vLDlfaGsG~~gi----ealsrGa~~v~~VE~~~~a~~~~k~N~~~~-~----~~~~~ii~~d~~---------~~  104 (183)
T d2fpoa1          43 VDAQCLDCFAGSGALGL----EALSRYAAGATLIEMDRAVSQQLIKNLATL-K----AGNARVVNSNAM---------SF  104 (183)
T ss_dssp             TTCEEEETTCTTCHHHH----HHHHTTCSEEEEECSCHHHHHHHHHHHHHT-T----CCSEEEECSCHH---------HH
T ss_pred             chhhhhhhhccccceee----eEEecCcceeEEEEEeechhhHHHHHHhhc-c----ccceeeeeeccc---------cc
Confidence            4567776654 455554    4566888 7999999988877666665542 1    135667766632         22


Q ss_pred             HhccCCCccEEEecc
Q 025705          142 WNGRLGPLHVLINNA  156 (249)
Q Consensus       142 ~~~~~g~id~linna  156 (249)
                      +.......|+++...
T Consensus       105 l~~~~~~fDlIf~DP  119 (183)
T d2fpoa1         105 LAQKGTPHNIVFVDP  119 (183)
T ss_dssp             HSSCCCCEEEEEECC
T ss_pred             ccccccccCEEEEcC
Confidence            333345789999874

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.05  E-value=4  Score=31.47  Aligned_cols=61  Identities=11%  Similarity=0.010  Sum_probs=41.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCC
Q 025705           63 VNDLTCIVTGSTSGIGREIARQLAES-GAHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLL  130 (249)
Q Consensus        63 ~~~~~vlItGas~gIG~~ia~~l~~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  130 (249)
                      -+|.+||=.|++.|   .++..++++ |++|+.++.+++-.+...+.+.+    .+....+.....|..
T Consensus        51 ~~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~----~~l~~~~~~~~~d~~  112 (280)
T d2fk8a1          51 KPGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLAS----IDTNRSRQVLLQGWE  112 (280)
T ss_dssp             CTTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT----SCCSSCEEEEESCGG
T ss_pred             CCCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHh----hccccchhhhhhhhh
Confidence            35789999999866   245556654 89999999998776665555544    233345666656654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.96  E-value=2.9  Score=31.97  Aligned_cols=73  Identities=12%  Similarity=0.061  Sum_probs=49.8

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcC-CEEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHH
Q 025705           64 NDLTCIVTGST-SGIGREIARQLAESG-AHVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEA  141 (249)
Q Consensus        64 ~~~~vlItGas-~gIG~~ia~~l~~~G-~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~  141 (249)
                      +|++|+-.||+ |+++..+|+    +| ++|+.++.+++..+-..+.++.    ++...++.++..|..+..        
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a~----~~~~~V~avd~n~~a~~~~~~N~~~----n~l~~~v~~~~~D~~~~~--------  170 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIAV----YGKAKVIAIEKDPYTFKFLVENIHL----NKVEDRMSAYNMDNRDFP--------  170 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHHH----HTCCEEEEECCCHHHHHHHHHHHHH----TTCTTTEEEECSCTTTCC--------
T ss_pred             CccEEEECcceEcHHHHHHHH----hCCcEEEEecCCHHHHHHHHHHHHH----hCCCceEEEEEcchHHhc--------
Confidence            47889998865 556665553    34 5999999999877666655554    233357899999986532        


Q ss_pred             HhccCCCccEEEec
Q 025705          142 WNGRLGPLHVLINN  155 (249)
Q Consensus       142 ~~~~~g~id~linn  155 (249)
                         ..+..|.+|.|
T Consensus       171 ---~~~~~D~Ii~~  181 (260)
T d2frna1         171 ---GENIADRILMG  181 (260)
T ss_dssp             ---CCSCEEEEEEC
T ss_pred             ---cCCCCCEEEEC
Confidence               11468888765

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=81.19  E-value=2.5  Score=31.81  Aligned_cols=80  Identities=8%  Similarity=-0.052  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEEcChHHHHHHHHHHHHhhcCCCCCCceEEEEccCCCHHHHHHHHHHH
Q 025705           64 NDLTCIVTGSTSGIGREIARQLAESGA-HVVMAVRNLKAANELIQKWQEEWSGKGLPLNIEAMELDLLSLDSVVRFSEAW  142 (249)
Q Consensus        64 ~~~~vlItGas~gIG~~ia~~l~~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~  142 (249)
                      ++++||=.|++.|   ..+..+++.|. +|+.+|.+++-++...+...+.    +...++.+..+|......        
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~----~~~~~v~f~~~D~~~~~~--------   88 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNM----KRRFKVFFRAQDSYGRHM--------   88 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTS----CCSSEEEEEESCTTTSCC--------
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhc----CCCcceEEEEcchhhhcc--------
Confidence            4688999998876   23556777775 7999999988777666555442    223478889999854321        


Q ss_pred             hccCCCccEEEeccccC
Q 025705          143 NGRLGPLHVLINNAGIF  159 (249)
Q Consensus       143 ~~~~g~id~linnag~~  159 (249)
                       ...+.+|+++.+-+..
T Consensus        89 -~~~~~fD~V~~~~~l~  104 (252)
T d1ri5a_          89 -DLGKEFDVISSQFSFH  104 (252)
T ss_dssp             -CCSSCEEEEEEESCGG
T ss_pred             -cccccceEEEEcceee
Confidence             1123689988775543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=80.41  E-value=0.3  Score=34.31  Aligned_cols=38  Identities=16%  Similarity=0.147  Sum_probs=26.6

Q ss_pred             CCCchHHHHHHHHHHcCCEEEEEEcChHHHHHHHHHHH
Q 025705           73 STSGIGREIARQLAESGAHVVMAVRNLKAANELIQKWQ  110 (249)
Q Consensus        73 as~gIG~~ia~~l~~~G~~Vil~~r~~~~~~~~~~~~~  110 (249)
                      |+|-+|+++++.|.+.+..+.+.+|+++++++..++..
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            56679999999886644444678999998888766544