Query 025707
Match_columns 249
No_of_seqs 125 out of 1202
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 15:50:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v0s_A Perakine reductase; AKR 100.0 1.1E-56 3.7E-61 394.3 18.6 230 9-238 1-231 (337)
2 3n2t_A Putative oxidoreductase 100.0 1.9E-55 6.5E-60 387.9 25.7 232 4-238 15-252 (348)
3 1pyf_A IOLS protein; beta-alph 100.0 3E-55 1E-59 381.4 24.4 225 9-235 1-228 (312)
4 1pz1_A GSP69, general stress p 100.0 6.4E-54 2.2E-58 376.1 23.7 214 9-224 1-216 (333)
5 1ynp_A Oxidoreductase, AKR11C1 100.0 8.9E-55 3E-59 379.0 17.6 209 6-222 18-227 (317)
6 3eau_A Voltage-gated potassium 100.0 1.9E-53 6.7E-58 372.3 20.9 212 9-225 3-223 (327)
7 3n6q_A YGHZ aldo-keto reductas 100.0 1.1E-52 3.9E-57 370.0 25.3 220 1-224 4-235 (346)
8 3erp_A Putative oxidoreductase 100.0 3.7E-52 1.3E-56 367.5 24.5 214 8-225 33-256 (353)
9 4exb_A Putative uncharacterize 100.0 3.4E-53 1.2E-57 364.9 17.3 223 7-247 28-261 (292)
10 3lut_A Voltage-gated potassium 100.0 7.4E-52 2.5E-56 367.5 23.6 213 7-225 36-257 (367)
11 1lqa_A TAS protein; TIM barrel 100.0 3.6E-51 1.2E-55 360.5 24.8 218 9-230 1-252 (346)
12 1ur3_M Hypothetical oxidoreduc 100.0 4.3E-51 1.5E-55 356.0 22.8 236 8-247 22-273 (319)
13 3f7j_A YVGN protein; aldo-keto 100.0 3.3E-51 1.1E-55 350.1 14.4 218 6-247 3-224 (276)
14 3up8_A Putative 2,5-diketo-D-g 100.0 4.7E-51 1.6E-55 352.2 12.8 216 7-247 22-241 (298)
15 3o0k_A Aldo/keto reductase; ss 100.0 6.6E-51 2.2E-55 349.1 13.4 216 8-247 25-245 (283)
16 3b3e_A YVGN protein; aldo-keto 100.0 1E-50 3.5E-55 351.9 14.2 216 8-247 39-258 (310)
17 1vbj_A Prostaglandin F synthas 100.0 1E-50 3.5E-55 347.7 13.5 219 5-247 5-227 (281)
18 2wzm_A Aldo-keto reductase; ox 100.0 1.4E-50 4.8E-55 347.2 12.3 217 7-247 9-230 (283)
19 4f40_A Prostaglandin F2-alpha 100.0 2.2E-50 7.5E-55 347.0 13.0 218 7-247 8-236 (288)
20 1hw6_A 2,5-diketo-D-gluconic a 100.0 1.7E-50 5.7E-55 346.1 11.5 215 9-247 3-224 (278)
21 3ln3_A Dihydrodiol dehydrogena 100.0 3E-48 1E-52 339.0 22.6 194 7-220 4-226 (324)
22 3buv_A 3-OXO-5-beta-steroid 4- 100.0 1E-48 3.5E-53 342.1 18.8 195 7-220 5-228 (326)
23 4gie_A Prostaglandin F synthas 100.0 1.8E-49 6E-54 341.6 13.0 217 7-247 11-234 (290)
24 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 4.8E-48 1.7E-52 337.5 21.3 195 7-221 3-226 (323)
25 1gve_A Aflatoxin B1 aldehyde r 100.0 4.4E-48 1.5E-52 338.3 20.1 195 20-224 4-206 (327)
26 2bp1_A Aflatoxin B1 aldehyde r 100.0 4.9E-48 1.7E-52 342.0 20.5 200 15-224 32-239 (360)
27 1zgd_A Chalcone reductase; pol 100.0 2.9E-48 9.8E-53 337.4 18.0 221 5-247 2-255 (312)
28 1qwk_A Aldose reductase, aldo- 100.0 1E-47 3.4E-52 334.7 19.7 189 9-220 5-210 (317)
29 1mzr_A 2,5-diketo-D-gluconate 100.0 1E-48 3.4E-53 337.3 12.8 216 6-247 22-244 (296)
30 1s1p_A Aldo-keto reductase fam 100.0 3.2E-47 1.1E-51 333.3 21.6 194 8-221 4-226 (331)
31 3b3d_A YTBE protein, putative 100.0 1.6E-48 5.6E-53 339.0 13.1 216 10-247 41-262 (314)
32 1vp5_A 2,5-diketo-D-gluconic a 100.0 1.8E-48 6.2E-53 336.0 13.1 213 10-247 15-237 (298)
33 1mi3_A Xylose reductase, XR; a 100.0 1.1E-46 3.7E-51 328.9 22.1 190 7-219 3-225 (322)
34 3krb_A Aldose reductase; ssgci 100.0 1E-46 3.4E-51 330.5 20.9 198 5-224 8-237 (334)
35 3o3r_A Aldo-keto reductase fam 100.0 2.1E-46 7.3E-51 326.2 21.4 187 9-218 2-217 (316)
36 1us0_A Aldose reductase; oxido 100.0 2.5E-46 8.5E-51 325.8 20.9 188 9-219 2-218 (316)
37 3h7u_A Aldo-keto reductase; st 100.0 1.5E-46 5E-51 329.5 19.4 217 7-247 23-268 (335)
38 3h7r_A Aldo-keto reductase; st 100.0 6.7E-46 2.3E-50 324.7 17.3 183 8-217 24-228 (331)
39 4gac_A Alcohol dehydrogenase [ 100.0 1.1E-45 3.6E-50 322.8 16.9 216 9-247 2-254 (324)
40 2bgs_A Aldose reductase; holoe 100.0 4.4E-45 1.5E-49 320.7 20.3 213 9-246 36-274 (344)
41 3cf4_A Acetyl-COA decarboxylas 97.8 6.2E-06 2.1E-10 79.2 2.9 99 115-219 231-351 (807)
42 1mdl_A Mandelate racemase; iso 94.3 1.7 5.9E-05 37.2 15.1 154 40-213 144-299 (359)
43 1nu5_A Chloromuconate cycloiso 93.8 2.3 7.9E-05 36.6 15.0 158 40-217 142-302 (370)
44 2nql_A AGR_PAT_674P, isomerase 93.6 2.4 8.1E-05 36.9 14.8 156 40-217 164-321 (388)
45 2o56_A Putative mandelate race 93.6 1.8 6E-05 37.9 14.0 155 40-214 152-326 (407)
46 2ovl_A Putative racemase; stru 93.5 2.4 8.2E-05 36.6 14.6 154 40-214 146-302 (371)
47 2zad_A Muconate cycloisomerase 93.5 1.7 6E-05 37.0 13.5 157 40-217 139-297 (345)
48 3ik4_A Mandelate racemase/muco 93.4 2.2 7.4E-05 36.9 14.1 157 40-217 143-302 (365)
49 3i4k_A Muconate lactonizing en 93.4 3.6 0.00012 35.7 17.6 157 40-216 148-307 (383)
50 3gd6_A Muconate cycloisomerase 93.3 1.3 4.3E-05 38.8 12.5 158 40-217 142-301 (391)
51 2rdx_A Mandelate racemase/muco 93.3 1.5 5.1E-05 38.0 12.9 152 40-215 145-298 (379)
52 2pgw_A Muconate cycloisomerase 93.2 3.9 0.00013 35.4 15.8 156 40-217 147-304 (384)
53 3i6e_A Muconate cycloisomerase 92.9 2.9 0.0001 36.3 14.2 156 40-216 148-305 (385)
54 2og9_A Mandelate racemase/muco 92.7 2.8 9.5E-05 36.5 13.7 153 40-213 162-317 (393)
55 3s5s_A Mandelate racemase/muco 92.5 2.9 9.8E-05 36.5 13.6 157 40-217 144-303 (389)
56 1tkk_A Similar to chloromucona 92.3 4.8 0.00016 34.5 14.7 156 40-215 140-299 (366)
57 2qde_A Mandelate racemase/muco 92.3 5.3 0.00018 34.8 15.2 156 40-216 145-302 (397)
58 3dg3_A Muconate cycloisomerase 92.3 3.3 0.00011 35.7 13.6 156 40-216 139-297 (367)
59 2qgy_A Enolase from the enviro 92.2 5.3 0.00018 34.7 16.7 154 40-213 149-304 (391)
60 3q45_A Mandelate racemase/muco 92.2 3 0.0001 36.0 13.3 157 40-217 140-298 (368)
61 2pp0_A L-talarate/galactarate 91.9 3.9 0.00013 35.7 13.7 151 40-213 175-330 (398)
62 3jva_A Dipeptide epimerase; en 91.8 5.6 0.00019 34.0 15.1 154 40-214 139-294 (354)
63 2ox4_A Putative mandelate race 91.8 5.5 0.00019 34.6 14.6 156 39-214 145-320 (403)
64 3mwc_A Mandelate racemase/muco 91.7 3.4 0.00012 36.2 13.0 150 41-216 164-317 (400)
65 3eez_A Putative mandelate race 91.4 3.7 0.00013 35.6 13.0 153 40-216 145-299 (378)
66 1r0m_A N-acylamino acid racema 91.4 5.7 0.00019 34.2 14.2 150 40-214 148-299 (375)
67 3r0u_A Enzyme of enolase super 91.3 6.8 0.00023 33.9 16.6 159 40-217 142-302 (379)
68 3fv9_G Mandelate racemase/muco 91.2 4.3 0.00015 35.3 13.2 155 40-216 145-305 (386)
69 2gl5_A Putative dehydratase pr 90.9 7.5 0.00026 33.9 15.6 155 39-213 149-328 (410)
70 2p8b_A Mandelate racemase/muco 90.9 5.4 0.00018 34.2 13.5 155 40-215 141-298 (369)
71 3bjs_A Mandelate racemase/muco 90.8 7.7 0.00026 34.2 14.6 149 42-211 187-338 (428)
72 3toy_A Mandelate racemase/muco 90.7 6.8 0.00023 34.0 14.0 156 40-215 167-325 (383)
73 2ps2_A Putative mandelate race 90.7 3.3 0.00011 35.6 11.9 154 40-217 146-302 (371)
74 2qq6_A Mandelate racemase/muco 90.5 5.9 0.0002 34.6 13.5 154 40-214 149-321 (410)
75 3qld_A Mandelate racemase/muco 90.5 5.9 0.0002 34.4 13.4 151 40-215 149-301 (388)
76 4dye_A Isomerase; enolase fami 90.4 3.5 0.00012 36.1 11.9 151 41-215 169-322 (398)
77 2qdd_A Mandelate racemase/muco 90.2 5.4 0.00018 34.4 12.9 152 40-215 145-298 (378)
78 2zc8_A N-acylamino acid racema 90.1 4.8 0.00016 34.6 12.4 150 40-214 141-292 (369)
79 4dwd_A Mandelate racemase/muco 90.1 8.9 0.0003 33.4 14.4 153 40-213 139-300 (393)
80 3tj4_A Mandelate racemase; eno 90.0 8.7 0.0003 33.1 14.7 153 40-212 151-306 (372)
81 3my9_A Muconate cycloisomerase 90.0 3.4 0.00011 35.8 11.3 156 40-215 146-303 (377)
82 2hzg_A Mandelate racemase/muco 89.7 9.5 0.00032 33.1 14.8 151 40-211 145-304 (401)
83 3u9i_A Mandelate racemase/muco 89.6 4.2 0.00014 35.4 11.8 157 40-217 165-332 (393)
84 2poz_A Putative dehydratase; o 89.5 9.7 0.00033 32.9 14.9 154 40-214 137-310 (392)
85 2hxt_A L-fuconate dehydratase; 89.1 8 0.00027 34.1 13.4 151 40-211 198-351 (441)
86 4e8g_A Enolase, mandelate race 88.8 11 0.00038 32.7 14.8 155 40-217 164-321 (391)
87 3ro6_B Putative chloromuconate 88.5 5.9 0.0002 33.9 11.8 157 40-217 140-299 (356)
88 3ozy_A Putative mandelate race 88.5 12 0.0004 32.5 14.9 152 40-212 151-305 (389)
89 1tzz_A Hypothetical protein L1 88.5 11 0.00036 32.7 13.5 152 40-211 165-325 (392)
90 1sjd_A N-acylamino acid racema 88.2 11 0.00039 32.1 15.8 151 40-214 141-293 (368)
91 1rvk_A Isomerase/lactonizing e 87.9 12 0.00042 32.1 15.6 153 40-212 149-310 (382)
92 3rr1_A GALD, putative D-galact 87.8 13 0.00045 32.4 15.4 151 40-213 125-288 (405)
93 2gdq_A YITF; mandelate racemas 87.6 7.9 0.00027 33.4 12.1 151 42-211 141-293 (382)
94 3va8_A Probable dehydratase; e 87.5 10 0.00035 33.6 12.9 155 39-217 190-347 (445)
95 1wuf_A Hypothetical protein LI 87.3 14 0.00047 32.0 14.2 152 40-216 161-314 (393)
96 3stp_A Galactonate dehydratase 86.6 15 0.00051 32.2 13.4 153 40-212 179-339 (412)
97 4a35_A Mitochondrial enolase s 86.4 17 0.00058 32.1 14.0 152 40-212 201-357 (441)
98 2chr_A Chloromuconate cycloiso 86.4 7.8 0.00027 33.2 11.3 158 40-217 143-302 (370)
99 3fcp_A L-Ala-D/L-Glu epimerase 86.4 15 0.00052 31.6 14.5 157 40-216 147-306 (381)
100 3p3b_A Mandelate racemase/muco 86.0 5.1 0.00017 34.8 10.0 150 42-216 150-315 (392)
101 1kko_A 3-methylaspartate ammon 85.9 13 0.00043 32.6 12.6 106 106-214 249-361 (413)
102 3sjn_A Mandelate racemase/muco 85.5 10 0.00034 32.7 11.6 153 41-213 147-304 (374)
103 3ddm_A Putative mandelate race 85.1 5.2 0.00018 34.8 9.6 151 42-212 157-309 (392)
104 3vdg_A Probable glucarate dehy 84.8 14 0.00049 32.7 12.4 154 39-216 192-348 (445)
105 3ugv_A Enolase; enzyme functio 84.6 9.5 0.00032 33.1 11.0 157 40-216 171-332 (390)
106 3dgb_A Muconate cycloisomerase 84.6 19 0.00064 31.1 13.9 157 40-216 148-307 (382)
107 4e5t_A Mandelate racemase / mu 84.2 20 0.00069 31.1 13.3 154 40-213 151-318 (404)
108 2oz8_A MLL7089 protein; struct 84.0 20 0.00069 30.9 18.6 149 40-211 145-296 (389)
109 3vc5_A Mandelate racemase/muco 83.9 16 0.00055 32.3 12.3 154 39-216 187-343 (441)
110 1chr_A Chloromuconate cycloiso 82.4 23 0.00078 30.3 16.2 156 42-217 144-302 (370)
111 3t6c_A RSPA, putative MAND fam 82.1 23 0.00077 31.3 12.6 154 40-213 155-350 (440)
112 3rcy_A Mandelate racemase/muco 82.0 26 0.0009 30.8 14.6 154 40-213 146-313 (433)
113 1nsj_A PRAI, phosphoribosyl an 81.8 4.5 0.00016 31.9 7.1 64 120-185 19-83 (205)
114 3mkc_A Racemase; metabolic pro 81.8 25 0.00085 30.4 14.1 151 43-213 160-316 (394)
115 3r4e_A Mandelate racemase/muco 81.6 20 0.00069 31.3 12.0 155 40-214 143-331 (418)
116 2ozt_A TLR1174 protein; struct 81.4 23 0.00079 29.8 13.9 158 41-217 117-277 (332)
117 4g8t_A Glucarate dehydratase; 81.2 10 0.00036 33.7 10.1 157 40-215 202-361 (464)
118 4e4u_A Mandalate racemase/muco 81.0 28 0.00094 30.4 14.2 154 40-213 144-311 (412)
119 3mqt_A Mandelate racemase/muco 79.4 30 0.001 29.9 13.7 151 43-213 155-311 (394)
120 1ydn_A Hydroxymethylglutaryl-C 79.4 5.1 0.00017 33.3 7.0 103 106-211 23-139 (295)
121 4hnl_A Mandelate racemase/muco 78.9 19 0.00066 31.4 11.0 155 40-214 153-332 (421)
122 2akz_A Gamma enolase, neural; 78.5 21 0.0007 31.6 11.0 96 106-210 270-368 (439)
123 3qy7_A Tyrosine-protein phosph 78.2 9.4 0.00032 31.2 8.2 158 39-212 17-193 (262)
124 3sbf_A Mandelate racemase / mu 78.0 34 0.0011 29.7 14.5 155 40-214 133-312 (401)
125 2ftp_A Hydroxymethylglutaryl-C 78.0 7.7 0.00026 32.4 7.8 102 106-210 27-142 (302)
126 4h1z_A Enolase Q92ZS5; dehydra 77.9 34 0.0012 29.7 16.0 156 40-217 188-345 (412)
127 1v5x_A PRA isomerase, phosphor 77.5 10 0.00035 29.8 7.9 64 120-185 18-82 (203)
128 3qtp_A Enolase 1; glycolysis, 77.4 38 0.0013 30.0 12.2 96 106-210 279-378 (441)
129 3v3w_A Starvation sensing prot 76.0 40 0.0014 29.5 12.8 155 40-214 149-337 (424)
130 3tji_A Mandelate racemase/muco 75.9 24 0.00082 30.9 10.7 154 40-213 154-332 (422)
131 4h83_A Mandelate racemase/muco 75.8 22 0.00076 30.7 10.4 176 11-212 142-319 (388)
132 3mzn_A Glucarate dehydratase; 75.1 16 0.00056 32.3 9.5 158 39-214 181-340 (450)
133 1nvm_A HOA, 4-hydroxy-2-oxoval 75.1 7.6 0.00026 33.1 7.0 105 105-211 26-139 (345)
134 3p0w_A Mandelate racemase/muco 74.9 20 0.00069 32.0 10.0 158 39-214 199-358 (470)
135 3pfr_A Mandelate racemase/muco 74.4 27 0.00091 31.0 10.7 157 39-214 184-343 (455)
136 1ydo_A HMG-COA lyase; TIM-barr 73.0 11 0.00036 31.7 7.3 102 106-210 25-140 (307)
137 4hpn_A Putative uncharacterize 72.2 46 0.0016 28.4 13.3 150 41-211 145-296 (378)
138 1y80_A Predicted cobalamin bin 72.0 18 0.00061 28.2 8.1 155 40-213 15-179 (210)
139 3vcn_A Mannonate dehydratase; 71.0 53 0.0018 28.7 11.7 155 40-214 150-338 (425)
140 3go2_A Putative L-alanine-DL-g 71.0 52 0.0018 28.6 12.3 150 40-212 143-319 (409)
141 1t57_A Conserved protein MTH16 69.1 20 0.00067 28.2 7.3 88 129-217 25-117 (206)
142 2pge_A MENC; OSBS, NYSGXRC, PS 69.1 39 0.0013 28.9 10.3 155 40-217 162-324 (377)
143 3o1n_A 3-dehydroquinate dehydr 68.0 49 0.0017 27.2 15.9 165 40-217 50-233 (276)
144 1pii_A N-(5'phosphoribosyl)ant 67.8 27 0.00091 31.1 9.0 62 120-185 272-334 (452)
145 4h2h_A Mandelate racemase/muco 67.8 58 0.002 27.8 13.6 154 40-217 150-307 (376)
146 1vp8_A Hypothetical protein AF 67.6 19 0.00064 28.2 6.9 87 130-217 18-110 (201)
147 2al1_A Enolase 1, 2-phospho-D- 67.0 54 0.0018 28.9 10.9 96 106-210 273-371 (436)
148 1wue_A Mandelate racemase/muco 67.0 60 0.0021 27.8 12.1 152 40-216 161-314 (386)
149 2ptz_A Enolase; lyase, glycoly 66.7 52 0.0018 28.9 10.7 95 107-210 273-372 (432)
150 1vpq_A Hypothetical protein TM 66.6 49 0.0017 27.1 9.9 162 20-210 12-179 (273)
151 4h3d_A 3-dehydroquinate dehydr 65.9 52 0.0018 26.7 18.0 190 7-220 8-216 (258)
152 3ec1_A YQEH GTPase; atnos1, at 65.1 64 0.0022 27.5 10.8 121 40-172 57-180 (369)
153 1kcz_A Beta-methylaspartase; b 64.8 52 0.0018 28.5 10.3 85 131-215 271-363 (413)
154 3tcs_A Racemase, putative; PSI 64.6 69 0.0024 27.6 13.3 153 40-213 147-309 (388)
155 2cw6_A Hydroxymethylglutaryl-C 63.6 14 0.00047 30.7 6.1 103 106-211 24-140 (298)
156 2pa6_A Enolase; glycolysis, ly 62.7 64 0.0022 28.1 10.5 98 107-213 268-369 (427)
157 1tx2_A DHPS, dihydropteroate s 62.3 34 0.0012 28.6 8.2 99 108-213 62-167 (297)
158 2yci_X 5-methyltetrahydrofolat 61.9 65 0.0022 26.4 10.4 105 107-217 32-137 (271)
159 3uj2_A Enolase 1; enzyme funct 59.9 59 0.002 28.8 9.7 128 74-210 246-389 (449)
160 2xvc_A ESCRT-III, SSO0910; cel 59.5 9.7 0.00033 23.5 3.2 21 139-159 37-57 (59)
161 3tqp_A Enolase; energy metabol 57.2 1E+02 0.0034 27.1 11.1 129 74-211 224-364 (428)
162 1z41_A YQJM, probable NADH-dep 56.5 88 0.003 26.2 12.9 95 85-184 209-306 (338)
163 1ps9_A 2,4-dienoyl-COA reducta 56.2 1.2E+02 0.004 28.0 11.6 134 44-184 143-309 (671)
164 1tv8_A MOAA, molybdenum cofact 55.4 89 0.003 25.9 11.6 97 39-156 50-160 (340)
165 3hgj_A Chromate reductase; TIM 55.4 94 0.0032 26.2 12.5 140 39-184 142-317 (349)
166 2i2x_B MTAC, methyltransferase 55.3 52 0.0018 26.6 8.1 145 40-207 51-204 (258)
167 3b1s_B Flagellar biosynthetic 59.1 2.7 9.2E-05 28.5 0.0 43 195-237 30-72 (87)
168 1qwg_A PSL synthase;, (2R)-pho 53.6 88 0.003 25.4 8.9 97 113-210 26-132 (251)
169 1olt_A Oxygen-independent copr 53.1 31 0.001 30.4 6.8 60 106-167 217-292 (457)
170 3dxi_A Putative aldolase; TIM 53.1 80 0.0027 26.5 9.1 105 106-211 21-133 (320)
171 2okt_A OSB synthetase, O-succi 52.7 13 0.00045 31.5 4.2 85 127-216 191-276 (342)
172 3iix_A Biotin synthetase, puta 52.2 1E+02 0.0034 25.6 11.7 119 39-174 84-214 (348)
173 3v5c_A Mandelate racemase/muco 52.0 1.1E+02 0.0039 26.2 13.5 147 42-213 150-313 (392)
174 3ekg_A Mandelate racemase/muco 52.0 42 0.0014 29.2 7.4 68 145-212 250-321 (404)
175 2q5c_A NTRC family transcripti 52.0 30 0.001 26.8 5.9 69 140-213 79-150 (196)
176 3ezx_A MMCP 1, monomethylamine 51.2 41 0.0014 26.4 6.7 147 40-206 17-174 (215)
177 2p3z_A L-rhamnonate dehydratas 51.1 91 0.0031 27.1 9.4 81 128-213 249-333 (415)
178 4f3h_A Fimxeal, putative uncha 51.0 83 0.0028 24.8 8.6 112 108-223 108-246 (250)
179 3bzy_B ESCU; auto cleavage pro 50.2 2.6 8.9E-05 28.3 -0.5 42 195-236 30-71 (83)
180 2pju_A Propionate catabolism o 50.0 82 0.0028 25.0 8.2 100 111-213 48-162 (225)
181 1jpd_X L-Ala-D/L-Glu epimerase 49.1 74 0.0025 26.5 8.3 151 40-217 132-283 (324)
182 2z61_A Probable aspartate amin 48.7 1.1E+02 0.0038 25.1 13.0 144 42-221 45-199 (370)
183 1sfl_A 3-dehydroquinate dehydr 48.5 1E+02 0.0035 24.5 12.6 167 40-217 15-198 (238)
184 2vt1_B Surface presentation of 48.4 3 0.0001 28.6 -0.4 42 195-236 30-71 (93)
185 2fym_A Enolase; RNA degradosom 47.9 1.4E+02 0.0048 26.0 12.9 98 106-212 267-369 (431)
186 3sma_A FRBF; N-acetyl transfer 45.9 35 0.0012 28.3 5.5 52 112-163 24-81 (286)
187 3dip_A Enolase; structural gen 45.9 1.5E+02 0.005 25.6 15.7 149 45-213 161-324 (410)
188 3s83_A Ggdef family protein; s 45.8 77 0.0026 25.1 7.7 110 110-223 106-242 (259)
189 3pao_A Adenosine deaminase; st 45.5 1.3E+02 0.0046 25.1 10.2 154 44-210 80-243 (326)
190 3ijw_A Aminoglycoside N3-acety 45.3 24 0.00081 29.1 4.4 51 112-162 17-73 (268)
191 2r14_A Morphinone reductase; H 45.2 1.5E+02 0.005 25.4 11.1 69 113-184 258-327 (377)
192 1w6t_A Enolase; bacterial infe 44.9 1.6E+02 0.0054 25.8 10.5 96 106-210 279-379 (444)
193 1aj0_A DHPS, dihydropteroate s 44.9 1.2E+02 0.004 25.0 8.7 99 107-213 36-141 (282)
194 1eye_A DHPS 1, dihydropteroate 44.5 1.3E+02 0.0045 24.7 11.1 100 107-213 27-132 (280)
195 3otr_A Enolase; structural gen 44.5 1.7E+02 0.0057 25.9 11.6 100 106-212 281-383 (452)
196 1icp_A OPR1, 12-oxophytodienoa 43.3 1.6E+02 0.0053 25.2 10.7 69 113-184 259-329 (376)
197 4dxk_A Mandelate racemase / mu 43.3 64 0.0022 27.9 7.2 149 45-213 157-320 (400)
198 3b0z_B Flagellar biosynthetic 49.3 5 0.00017 28.6 0.0 43 195-237 30-72 (114)
199 1gk8_I Ribulose bisphosphate c 43.3 74 0.0025 23.3 6.3 97 26-134 12-112 (140)
200 2pgf_A Adenosine deaminase; me 41.6 1.6E+02 0.0055 24.9 9.9 97 110-214 187-287 (371)
201 2nyg_A YOKD protein; PFAM02522 41.6 31 0.0011 28.4 4.6 51 112-162 15-71 (273)
202 4aaj_A N-(5'-phosphoribosyl)an 41.6 1.3E+02 0.0045 23.8 8.4 81 121-209 38-119 (228)
203 2wqp_A Polysialic acid capsule 41.4 1.7E+02 0.0056 25.0 10.6 128 39-188 88-239 (349)
204 3fvs_A Kynurenine--oxoglutarat 40.9 1.6E+02 0.0055 24.7 12.9 152 41-222 43-224 (422)
205 3o1n_A 3-dehydroquinate dehydr 39.8 1.5E+02 0.0052 24.1 9.6 22 40-61 117-139 (276)
206 2yr1_A 3-dehydroquinate dehydr 39.7 1.5E+02 0.005 23.9 12.0 122 39-175 97-219 (257)
207 3rmj_A 2-isopropylmalate synth 39.6 1.5E+02 0.0051 25.3 8.8 24 39-62 31-54 (370)
208 3ktc_A Xylose isomerase; putat 39.6 19 0.00066 30.0 3.1 62 19-80 5-72 (333)
209 3ftb_A Histidinol-phosphate am 39.5 1.5E+02 0.0052 24.0 11.5 140 42-216 42-188 (361)
210 3aek_B Light-independent proto 39.5 1.3E+02 0.0045 27.0 8.8 131 70-215 69-238 (525)
211 3cyj_A Mandelate racemase/muco 38.2 1.8E+02 0.0062 24.5 16.4 153 40-214 144-300 (372)
212 1wa3_A 2-keto-3-deoxy-6-phosph 38.1 1.3E+02 0.0044 22.8 9.0 89 107-210 20-109 (205)
213 3ijl_A Muconate cycloisomerase 38.1 1.8E+02 0.006 24.3 11.2 150 40-217 134-286 (338)
214 1itu_A Renal dipeptidase; glyc 37.9 34 0.0012 29.5 4.4 107 42-164 178-287 (369)
215 3t7y_A YOP proteins translocat 37.8 3.2 0.00011 28.8 -1.7 41 195-235 45-85 (97)
216 3l5l_A Xenobiotic reductase A; 37.7 1.9E+02 0.0064 24.5 12.4 142 38-184 147-324 (363)
217 4hjf_A Ggdef family protein; s 37.3 1.7E+02 0.0057 24.5 8.7 128 84-223 162-315 (340)
218 1f6y_A 5-methyltetrahydrofolat 37.2 1.6E+02 0.0056 23.7 11.5 102 107-213 23-124 (262)
219 3qn3_A Enolase; structural gen 36.9 2.1E+02 0.0072 24.9 11.4 135 70-213 220-364 (417)
220 3fxg_A Rhamnonate dehydratase; 36.0 61 0.0021 28.7 5.9 69 145-213 256-327 (455)
221 3g8r_A Probable spore coat pol 35.9 1.7E+02 0.0057 25.0 8.4 108 39-167 75-204 (350)
222 4djd_D C/Fe-SP, corrinoid/iron 35.9 2E+02 0.0067 24.2 8.9 89 120-214 91-189 (323)
223 2gwg_A 4-oxalomesaconate hydra 35.3 1.8E+02 0.0063 24.0 8.7 71 144-214 92-181 (350)
224 1t57_A Conserved protein MTH16 35.2 50 0.0017 25.8 4.5 76 35-124 31-106 (206)
225 2ph5_A Homospermidine synthase 35.1 19 0.00064 32.3 2.4 22 42-63 94-115 (480)
226 3eeg_A 2-isopropylmalate synth 34.8 1.1E+02 0.0037 25.7 7.0 25 39-63 25-49 (325)
227 2jli_A YSCU, YOP proteins tran 34.7 6.5 0.00022 28.4 -0.5 41 195-235 74-114 (123)
228 3c01_E Surface presentation of 34.6 3.9 0.00013 28.3 -1.7 41 195-235 30-70 (98)
229 3bzs_A ESCU; auto cleavage pro 34.1 6.8 0.00023 28.9 -0.5 42 195-236 84-125 (137)
230 2jlj_A YSCU, YOP proteins tran 33.9 6.9 0.00023 29.1 -0.5 42 195-236 83-124 (144)
231 2a5h_A L-lysine 2,3-aminomutas 33.9 2.3E+02 0.0079 24.4 10.9 57 105-164 144-201 (416)
232 3noy_A 4-hydroxy-3-methylbut-2 33.7 1.7E+02 0.0058 25.1 7.9 101 107-219 44-150 (366)
233 3k13_A 5-methyltetrahydrofolat 33.6 2E+02 0.007 23.8 11.6 101 106-213 34-141 (300)
234 3ri6_A O-acetylhomoserine sulf 33.1 96 0.0033 26.9 6.7 100 114-219 109-211 (430)
235 3rys_A Adenosine deaminase 1; 32.6 2.2E+02 0.0076 23.9 12.3 155 44-210 83-246 (343)
236 3qhx_A Cystathionine gamma-syn 32.5 2.2E+02 0.0076 23.9 9.4 88 128-219 106-195 (392)
237 2bas_A YKUI protein; EAL domai 32.2 2.5E+02 0.0084 24.3 12.9 107 115-226 129-263 (431)
238 3l5a_A NADH/flavin oxidoreduct 32.0 2.5E+02 0.0087 24.3 9.7 140 39-184 160-345 (419)
239 1sfl_A 3-dehydroquinate dehydr 31.9 1.9E+02 0.0065 22.9 10.6 123 39-175 80-205 (238)
240 3dzz_A Putative pyridoxal 5'-p 31.7 2.1E+02 0.0073 23.4 13.8 149 41-222 42-210 (391)
241 3aty_A Tcoye, prostaglandin F2 31.5 2.4E+02 0.0084 24.0 12.2 134 39-184 163-335 (379)
242 1p1j_A Inositol-3-phosphate sy 31.3 2.9E+02 0.01 24.9 9.9 49 108-156 220-272 (533)
243 4e4f_A Mannonate dehydratase; 31.2 2.6E+02 0.0089 24.2 13.0 98 106-213 239-338 (426)
244 1vko_A Inositol-3-phosphate sy 31.0 3E+02 0.01 24.9 9.5 49 108-156 224-276 (537)
245 1uwk_A Urocanate hydratase; hy 31.0 1.1E+02 0.0038 27.5 6.5 125 48-186 118-267 (557)
246 3h2y_A GTPase family protein; 30.9 2.4E+02 0.0083 23.8 11.3 121 40-172 55-178 (368)
247 2fkn_A Urocanate hydratase; ro 30.5 1.3E+02 0.0045 27.0 6.9 125 48-186 114-263 (552)
248 1x87_A Urocanase protein; stru 30.4 1.3E+02 0.0046 27.0 6.9 105 68-186 143-262 (551)
249 3ngj_A Deoxyribose-phosphate a 30.3 53 0.0018 26.5 4.1 32 39-70 154-185 (239)
250 2opj_A O-succinylbenzoate-COA 30.0 1.1E+02 0.0039 25.5 6.4 82 128-217 151-233 (327)
251 3lte_A Response regulator; str 30.0 1.2E+02 0.004 20.4 5.7 59 125-186 49-110 (132)
252 2h9a_B CO dehydrogenase/acetyl 29.9 2.4E+02 0.0082 23.4 9.1 88 121-213 85-181 (310)
253 2dqw_A Dihydropteroate synthas 29.7 2.4E+02 0.0081 23.3 8.6 87 120-213 62-154 (294)
254 3e2y_A Kynurenine-oxoglutarate 29.7 2.4E+02 0.0082 23.3 10.3 150 41-222 38-217 (410)
255 2gou_A Oxidoreductase, FMN-bin 29.7 2.6E+02 0.0088 23.7 12.5 69 113-185 253-322 (365)
256 2w9m_A Polymerase X; SAXS, DNA 29.5 3.2E+02 0.011 24.7 11.8 84 127-214 420-517 (578)
257 3mwd_B ATP-citrate synthase; A 29.3 86 0.003 26.5 5.5 83 68-158 235-325 (334)
258 1vli_A Spore coat polysacchari 29.3 1.8E+02 0.0063 25.1 7.6 130 39-188 98-251 (385)
259 3pdi_B Nitrogenase MOFE cofact 29.1 2.9E+02 0.01 24.2 11.5 119 49-184 53-202 (458)
260 2vp8_A Dihydropteroate synthas 29.1 2E+02 0.007 24.0 7.7 98 108-213 64-168 (318)
261 3eeg_A 2-isopropylmalate synth 29.0 2.5E+02 0.0086 23.4 9.3 95 113-213 31-143 (325)
262 3qc0_A Sugar isomerase; TIM ba 29.0 1.3E+02 0.0045 23.4 6.5 38 19-63 2-39 (275)
263 1vd6_A Glycerophosphoryl diest 28.9 2E+02 0.0068 22.2 11.3 151 41-213 21-194 (224)
264 3gfz_A Klebsiella pneumoniae B 28.7 73 0.0025 27.6 5.1 88 142-233 291-404 (413)
265 1vyr_A Pentaerythritol tetrani 28.4 2.7E+02 0.0092 23.5 14.1 67 114-184 255-322 (364)
266 3ndn_A O-succinylhomoserine su 28.1 1.6E+02 0.0056 25.1 7.3 100 114-219 108-210 (414)
267 2wje_A CPS4B, tyrosine-protein 27.8 2.2E+02 0.0075 22.3 10.7 156 40-212 22-202 (247)
268 3l23_A Sugar phosphate isomera 27.8 1.6E+02 0.0055 23.8 6.9 52 23-80 14-70 (303)
269 3neh_A Renal dipeptidase famil 27.7 77 0.0026 26.7 4.9 106 42-164 154-262 (318)
270 1vcv_A Probable deoxyribose-ph 27.3 1.6E+02 0.0054 23.4 6.4 130 37-185 12-148 (226)
271 1u83_A Phosphosulfolactate syn 27.3 2.3E+02 0.0079 23.2 7.5 96 112-210 52-156 (276)
272 1ydo_A HMG-COA lyase; TIM-barr 27.3 2.6E+02 0.0089 23.0 12.3 24 39-62 25-48 (307)
273 1vp8_A Hypothetical protein AF 27.1 1.1E+02 0.0036 23.9 5.1 77 35-124 23-99 (201)
274 3lmz_A Putative sugar isomeras 27.1 2.2E+02 0.0075 22.1 7.5 91 118-215 38-135 (257)
275 2p0o_A Hypothetical protein DU 26.8 3E+02 0.01 23.6 9.8 150 40-216 15-182 (372)
276 1ub3_A Aldolase protein; schif 26.8 2.3E+02 0.0079 22.2 10.3 132 38-185 15-153 (220)
277 3gka_A N-ethylmaleimide reduct 26.5 3E+02 0.01 23.4 11.9 63 113-184 253-315 (361)
278 1ep3_A Dihydroorotate dehydrog 26.4 1.6E+02 0.0055 23.8 6.7 130 40-185 109-270 (311)
279 2y5s_A DHPS, dihydropteroate s 26.3 1.6E+02 0.0054 24.4 6.5 99 107-213 44-148 (294)
280 3ewb_X 2-isopropylmalate synth 26.3 2.7E+02 0.0091 22.8 12.7 24 39-62 24-47 (293)
281 2o7s_A DHQ-SDH PR, bifunctiona 25.9 3.5E+02 0.012 24.0 15.4 85 40-131 15-100 (523)
282 3pjx_A Cyclic dimeric GMP bind 25.0 1.4E+02 0.0047 25.6 6.2 108 111-223 292-426 (430)
283 3en0_A Cyanophycinase; serine 24.8 1.4E+02 0.0047 24.7 5.9 56 108-163 69-152 (291)
284 3obi_A Formyltetrahydrofolate 24.7 2.9E+02 0.0098 22.6 8.0 149 41-215 17-176 (288)
285 1v0l_A Endo-1,4-beta-xylanase 24.7 1.1E+02 0.0037 25.5 5.3 105 108-215 148-270 (313)
286 2ztj_A Homocitrate synthase; ( 24.6 3.3E+02 0.011 23.2 10.9 24 39-62 22-45 (382)
287 1qwg_A PSL synthase;, (2R)-pho 24.5 2.1E+02 0.0072 23.1 6.7 85 43-135 86-170 (251)
288 2oda_A Hypothetical protein ps 24.0 1.9E+02 0.0067 21.6 6.4 16 197-212 117-132 (196)
289 3kki_A CAI-1 autoinducer synth 23.9 3.1E+02 0.011 22.7 13.2 87 125-219 141-230 (409)
290 3f4w_A Putative hexulose 6 pho 23.8 1.4E+02 0.0049 22.6 5.6 85 120-210 20-108 (211)
291 3oa3_A Aldolase; structural ge 23.7 2.1E+02 0.0072 23.6 6.7 75 39-126 185-264 (288)
292 3acz_A Methionine gamma-lyase; 23.5 2E+02 0.0069 24.0 7.0 101 113-219 85-188 (389)
293 1nvm_A HOA, 4-hydroxy-2-oxoval 23.5 3.2E+02 0.011 22.8 17.2 24 39-62 27-50 (345)
294 3o9z_A Lipopolysaccaride biosy 23.5 2.5E+02 0.0087 22.9 7.4 59 107-174 55-116 (312)
295 2a4a_A Deoxyribose-phosphate a 23.5 3.1E+02 0.01 22.5 8.0 138 37-187 43-196 (281)
296 1vi6_A 30S ribosomal protein S 23.4 1.1E+02 0.0039 23.9 4.8 22 190-211 123-144 (208)
297 2cw6_A Hydroxymethylglutaryl-C 23.4 3E+02 0.01 22.4 13.3 24 39-62 24-47 (298)
298 2f6k_A Metal-dependent hydrola 23.1 2.8E+02 0.0097 22.0 9.4 71 144-214 76-157 (307)
299 3ly0_A Dipeptidase AC. metallo 23.0 51 0.0017 28.4 2.9 107 42-164 192-305 (364)
300 3c5y_A Ribose/galactose isomer 23.0 2.9E+02 0.0099 22.0 9.7 96 109-213 35-134 (231)
301 2vvp_A Ribose-5-phosphate isom 22.8 2.4E+02 0.0083 21.1 9.5 95 108-211 14-110 (162)
302 3ff4_A Uncharacterized protein 22.7 1.7E+02 0.0057 20.6 5.3 52 127-210 59-110 (122)
303 1bxn_I Rubisco, protein (ribul 22.5 2.3E+02 0.0078 20.7 9.0 86 23-135 2-88 (139)
304 3nmy_A Xometc, cystathionine g 22.3 1.2E+02 0.0043 25.8 5.4 56 165-220 140-197 (400)
305 1cs1_A CGS, protein (cystathio 22.2 3.3E+02 0.011 22.4 8.8 55 165-219 125-181 (386)
306 2jya_A AGR_C_3324P, uncharacte 22.2 64 0.0022 22.5 2.8 21 195-215 62-82 (106)
307 3nhm_A Response regulator; pro 22.1 1.3E+02 0.0046 20.0 4.7 60 125-187 46-108 (133)
308 1p1x_A Deoxyribose-phosphate a 22.1 2.8E+02 0.0095 22.4 7.1 104 36-154 22-129 (260)
309 3sy8_A ROCR; TIM barrel phosph 21.9 2.9E+02 0.01 23.2 7.7 111 110-224 243-380 (400)
310 2ztj_A Homocitrate synthase; ( 21.8 3.7E+02 0.013 22.8 8.5 97 105-209 21-133 (382)
311 1li5_A Cysrs, cysteinyl-tRNA s 21.8 90 0.0031 27.6 4.4 47 108-158 89-135 (461)
312 4ab4_A Xenobiotic reductase B; 21.4 3.7E+02 0.013 22.7 12.0 132 39-184 143-307 (362)
313 3j20_B 30S ribosomal protein S 21.1 1.8E+02 0.0061 22.7 5.5 22 190-211 119-140 (202)
314 3l8a_A METC, putative aminotra 21.0 3.7E+02 0.013 22.5 13.8 150 41-222 76-244 (421)
315 3nrb_A Formyltetrahydrofolate 20.8 3.5E+02 0.012 22.1 7.8 147 41-215 18-175 (287)
316 3h14_A Aminotransferase, class 20.7 3.5E+02 0.012 22.2 11.9 149 42-221 47-210 (391)
317 3fdb_A Beta C-S lyase, putativ 20.6 3.4E+02 0.012 22.0 13.3 151 41-221 38-199 (377)
318 2yr1_A 3-dehydroquinate dehydr 20.6 3.3E+02 0.011 21.8 18.8 164 40-217 30-212 (257)
319 2i7g_A Monooxygenase, AGR_C_41 20.5 2.3E+02 0.0077 23.9 6.6 44 106-152 309-352 (376)
320 2xsa_A Ogoga, hyaluronoglucosa 20.4 1.8E+02 0.006 25.8 5.8 31 32-62 7-37 (447)
321 3hn3_A Beta-G1, beta-glucuroni 20.3 4.8E+02 0.016 23.6 10.3 109 18-137 320-431 (613)
322 3ivs_A Homocitrate synthase, m 20.2 4.3E+02 0.015 23.0 11.0 26 37-62 56-81 (423)
323 1bwv_S Rubisco, protein (ribul 20.2 2.6E+02 0.0088 20.4 9.7 85 23-134 2-87 (138)
324 3guv_A Site-specific recombina 20.2 93 0.0032 22.9 3.6 50 113-163 60-112 (167)
325 3c8z_A Cysteinyl-tRNA syntheta 20.1 1.9E+02 0.0066 24.9 6.2 47 108-158 106-152 (414)
No 1
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.1e-56 Score=394.29 Aligned_cols=230 Identities=72% Similarity=1.201 Sum_probs=194.7
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC-CchHHHHHHHHHcCCCCCeE
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQ 87 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-g~se~~lg~~l~~~~r~~~~ 87 (249)
|+||+||++|++||+||||||++|+.|+...+++++.++|+.|+++|||+||||+.||+ |.+|+.+|++|+..+|++++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~ 80 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQ 80 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCE
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceE
Confidence 89999999999999999999999987876668999999999999999999999999997 58999999999866899999
Q ss_pred EEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCH
Q 025707 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
|+||++......+....+.+++.+++++++||++||+||||+|++|+|+...+++++|++|++|+++|+||+||||||++
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 160 (337)
T 3v0s_A 81 VGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASP 160 (337)
T ss_dssp EEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred EEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCH
Confidence 99999875422222334678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCC
Q 025707 168 DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFS 238 (249)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~ 238 (249)
++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|+|+.....+++++++...|
T Consensus 161 ~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~~~~~~~~~~~~ 231 (337)
T 3v0s_A 161 DTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSVLTSHP 231 (337)
T ss_dssp HHHHHHHHHSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHHHHHC------------
T ss_pred HHHHHHhccCCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCCCCCCCCCCcchhhccc
Confidence 99999999999999999999999987778999999999999999999999999873333444444444433
No 2
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=1.9e-55 Score=387.91 Aligned_cols=232 Identities=30% Similarity=0.480 Sum_probs=204.3
Q ss_pred cccccCCceecCCCCcccCcceeecccccCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCC
Q 025707 4 DKKLQVPRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP 82 (249)
Q Consensus 4 ~~~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~ 82 (249)
.+|. |+|++||++|++||+||||||++++. |+. .+++++.++|+.|+++|||+||||+.||.|.+|+.+|++|+. +
T Consensus 15 ~~m~-M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~ 91 (348)
T 3n2t_A 15 SHMA-SDTIRIPGIDTPLSRVALGTWAIGGWMWGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-K 91 (348)
T ss_dssp --CT-TSEECCTTCSSCEESEEEECTTSSCSSSCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-S
T ss_pred CCCC-ceeeecCCCCCccCCEeEeCccccCCCCCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-C
Confidence 3453 99999999999999999999999863 554 489999999999999999999999999999999999999996 8
Q ss_pred CCCeEEEeccccccc-CCc---ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee
Q 025707 83 RENIQVATKFGFVEL-GFT---SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK 158 (249)
Q Consensus 83 r~~~~I~tK~~~~~~-~~~---~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 158 (249)
|++++|+||++.... .++ ....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++|+||
T Consensus 92 R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir 171 (348)
T 3n2t_A 92 PNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIR 171 (348)
T ss_dssp CCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEE
T ss_pred CCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcce
Confidence 999999999975431 111 2234578999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCC-CCCCCCcccccC
Q 025707 159 YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV-ESVPLDSFLVCF 237 (249)
Q Consensus 159 ~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~-~~~~~~~~~~~~ 237 (249)
+||||||++++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|+|++.. ..++++++|...
T Consensus 172 ~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~ 251 (348)
T 3n2t_A 172 ALGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSND 251 (348)
T ss_dssp EEEEESCCHHHHHHHHHHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCCTTCCCCTTSGGGGC
T ss_pred EEecCCCCHHHHHHHHHhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCccCCCCCCCcchhhcc
Confidence 9999999999999999999999999999999998778999999999999999999999999999543 344555555443
Q ss_pred C
Q 025707 238 S 238 (249)
Q Consensus 238 ~ 238 (249)
|
T Consensus 252 ~ 252 (348)
T 3n2t_A 252 P 252 (348)
T ss_dssp G
T ss_pred c
Confidence 3
No 3
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=3e-55 Score=381.45 Aligned_cols=225 Identities=31% Similarity=0.574 Sum_probs=198.6
Q ss_pred CCceecCCCCcccCcceeecccccCC--CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGC--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~--~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~ 86 (249)
|+|++||++|++||+||||||++|+. |+ ..+++++.++|+.|++.|||+||||+.||+|.+|+.+|++|+..+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~ 79 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYP-NLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDV 79 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCS-SCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGC
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCC-CCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeE
Confidence 78999999999999999999999864 43 2478999999999999999999999999999999999999985579999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (249)
+|+||++... ..+....+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++|+||+||||||+
T Consensus 80 ~i~TK~g~~~-~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (312)
T 1pyf_A 80 VIATKAAHRK-QGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFS 158 (312)
T ss_dssp EEEEEECEEE-ETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred EEEEEeCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCC
Confidence 9999986321 111112457899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC-CCCCCCCcccc
Q 025707 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV-VESVPLDSFLV 235 (249)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~-~~~~~~~~~~~ 235 (249)
+++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++. ...++++++|.
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~~~~r~ 228 (312)
T 1pyf_A 159 LEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRN 228 (312)
T ss_dssp HHHHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTTCGGG
T ss_pred HHHHHHHHhhCCceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCCCCCCCCCccccc
Confidence 9999999998899999999999999876789999999999999999999999999853 23445555553
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=6.4e-54 Score=376.11 Aligned_cols=214 Identities=33% Similarity=0.552 Sum_probs=194.5
Q ss_pred CCceecCCCCcccCcceeecccccCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~ 86 (249)
|+|++||++|++||+||||||++++. |+ ..+++++.++|+.|+++|||+||||+.||.|.+|+.+|++|+. .+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~ 79 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWG-GTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV 79 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTT-CCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCC-CCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeE
Confidence 78999999999999999999999874 65 3488999999999999999999999999999999999999986 379999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (249)
+|+||++..... +....+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++|+||+||||||+
T Consensus 80 ~i~TK~~~~~~~-~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (333)
T 1pz1_A 80 ILATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFS 158 (333)
T ss_dssp EEEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCC
T ss_pred EEEEeeCccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCC
Confidence 999999732110 0011246899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
+++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 216 (333)
T 1pz1_A 159 IEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMT 216 (333)
T ss_dssp HHHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCC
T ss_pred HHHHHHHHhcCCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCcc
Confidence 9999999999999999999999999876889999999999999999999999999853
No 5
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=8.9e-55 Score=379.02 Aligned_cols=209 Identities=35% Similarity=0.566 Sum_probs=184.9
Q ss_pred cccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCC
Q 025707 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPREN 85 (249)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~ 85 (249)
+..|+||++|++|++||+||||||+++. +.+++.++|+.|++.|||+||||+.||.|.+|+.+|++|+. +|++
T Consensus 18 ~~~M~~r~lg~tg~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~~ 90 (317)
T 1ynp_A 18 GSHMKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-RRQD 90 (317)
T ss_dssp --CCCEEECTTSSCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-CGGG
T ss_pred cCCcceeecCCCCCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-CCCe
Confidence 3579999999999999999999999875 56899999999999999999999999999999999999995 8999
Q ss_pred eEEEecccccccCCc-ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 86 IQVATKFGFVELGFT-SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 86 ~~I~tK~~~~~~~~~-~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
++|+||++....... ....+.+++.+++++++||++||+||||+|++|+|+...+++++|++|++|+++|+||+|||||
T Consensus 91 v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 170 (317)
T 1ynp_A 91 IILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISS 170 (317)
T ss_dssp CEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEEC
T ss_pred EEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecC
Confidence 999999986432110 0123578999999999999999999999999999998888999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 165 ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
|++++++++++..+++++|++||++++..+. ++++|+++||+|++|+||++|+|+++
T Consensus 171 ~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~ 227 (317)
T 1ynp_A 171 IRPNVIKEYLKRSNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR 227 (317)
T ss_dssp CCHHHHHHHHHHSCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS
T ss_pred CCHHHHHHHHhcCCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC
Confidence 9999999999988899999999999987544 99999999999999999999999987
No 6
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=1.9e-53 Score=372.25 Aligned_cols=212 Identities=29% Similarity=0.467 Sum_probs=190.4
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~ 86 (249)
|+||+||++|++||+||||||.. ||...+.+++.++|+.|+++|||+||||+.||+|.+|+.+|++|+. .+|+++
T Consensus 3 m~yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v 79 (327)
T 3eau_A 3 QFYRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSL 79 (327)
T ss_dssp CSEEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGC
T ss_pred chhcccCCCCCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCeE
Confidence 89999999999999999999842 4445688999999999999999999999999988999999999987 579999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (249)
+|+||+++... .....+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++|+||+||||||+
T Consensus 80 ~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 157 (327)
T 3eau_A 80 VITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 157 (327)
T ss_dssp EEEEEESBCCS--SGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred EEEEeecCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecCCC
Confidence 99999864321 1123457899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc------CCceEEeeecCccccch-hhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 167 PDTIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 167 ~~~l~~~~~~------~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
+++++++... .+++++|++||++++.. +.+++++|+++||++++|+||++|+|+|++..
T Consensus 158 ~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~ 223 (327)
T 3eau_A 158 SMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 223 (327)
T ss_dssp HHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred HHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccC
Confidence 9999988654 57999999999998863 36799999999999999999999999999654
No 7
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=1.1e-52 Score=370.04 Aligned_cols=220 Identities=29% Similarity=0.543 Sum_probs=193.6
Q ss_pred Ccccccc-cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--CchHHHHHHH
Q 025707 1 MAEDKKL-QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKA 77 (249)
Q Consensus 1 ~~~~~~~-~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g~se~~lg~~ 77 (249)
|++.++. .|+||+||++|++||.||||||+. ++...+.+++.++|+.|++.|||+||||+.||+ |.||+.+|++
T Consensus 4 ~~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~a 80 (346)
T 3n6q_A 4 LANPERYGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL 80 (346)
T ss_dssp CCCTTTTSSCCEEECTTSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHH
T ss_pred ccCCCcccCceeEecCCCCCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHH
Confidence 5666664 599999999999999999999853 344557899999999999999999999999997 8899999999
Q ss_pred HHc--CC-CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc
Q 025707 78 LKE--LP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE 154 (249)
Q Consensus 78 l~~--~~-r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~ 154 (249)
|++ .+ |++++|+||++...... ......+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++
T Consensus 81 l~~~~~~~R~~~~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~ 159 (346)
T 3n6q_A 81 LREDFAAYRDELIISTKAGYDMWPG-PYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQS 159 (346)
T ss_dssp HHHHCTTTGGGCEEEEEECSCCSSS-TTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHT
T ss_pred HHhhcccccccEEEEEEecccCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHc
Confidence 987 34 99999999987543211 111234899999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEcCCCCHHHHHHHhhc-----CCceEEeeecCccccchhh-hHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 155 GKIKYIGLSEASPDTIRRAHAV-----HPITAVQLEWSLWARDIEN-EIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 155 G~ir~iGvs~~~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~~-~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
|+||+||||||++++++++.+. .+++++|++||++++..+. +++++|+++||+|++|+||++|+|++++.
T Consensus 160 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~ 235 (346)
T 3n6q_A 160 GKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL 235 (346)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC
T ss_pred CCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCcc
Confidence 9999999999999999987654 5788999999999987655 89999999999999999999999999854
No 8
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=3.7e-52 Score=367.53 Aligned_cols=214 Identities=29% Similarity=0.545 Sum_probs=190.5
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--CchHHHHHHHHHc-C--C
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKALKE-L--P 82 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g~se~~lg~~l~~-~--~ 82 (249)
.|+||+||++|++||+||||||+. ||...+.+++.++|+.|++.|||+||||+.||+ |.+|+.||++|++ . .
T Consensus 33 ~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~ 109 (353)
T 3erp_A 33 TMEYRRCGRSGVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPW 109 (353)
T ss_dssp SCCEEECSSSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGG
T ss_pred cceeeecCCCCCccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCC
Confidence 599999999999999999999932 333458899999999999999999999999998 8899999999985 3 3
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
|++++|+||++...... ......+++.+++++++||++||+||||+|++|+|+...+++++|++|++|+++|+||+|||
T Consensus 110 R~~v~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGv 188 (353)
T 3erp_A 110 RDELIISTKAGYTMWDG-PYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGI 188 (353)
T ss_dssp GGGCEEEEEESSCCSSS-TTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCeEEEEeeeccCCCCC-cccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEe
Confidence 99999999997542111 11123479999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhc-----CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 163 SEASPDTIRRAHAV-----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 163 s~~~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
|||++++++++.+. .+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++..
T Consensus 189 Sn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~ 256 (353)
T 3erp_A 189 SNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLN 256 (353)
T ss_dssp ESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccC
Confidence 99999999988764 6899999999999987668899999999999999999999999998543
No 9
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=3.4e-53 Score=364.94 Aligned_cols=223 Identities=24% Similarity=0.271 Sum_probs=188.8
Q ss_pred ccCCceecCCCCcccCcceeecccccC--------CCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHH
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSG--------CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKAL 78 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~--------~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l 78 (249)
..|+||+||++|++||+||||||++++ .|+. .+++++.++|+.|++.|||+||||+.|| .+|+.+|++|
T Consensus 28 ~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~al 104 (292)
T 4exb_A 28 LHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLL 104 (292)
T ss_dssp STTCCEECTTSSCEECSEEEECSTTTCC---------CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHHH
T ss_pred CCceeeecCCCCCccCCEeEcccccCCCcccccccccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHHh
Confidence 368999999999999999999999986 3443 4889999999999999999999999998 8999999999
Q ss_pred HcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecC--CCCCCHH-HHHHHHHHHHHcC
Q 025707 79 KELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV--DTSVPIE-ETIGEMKKLVEEG 155 (249)
Q Consensus 79 ~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~--~~~~~~~-~~~~~l~~l~~~G 155 (249)
+. +|++++|+||++..... +....+.+++.+++++++||++||+||||+|++|+| +...+.+ ++|++|++|+++|
T Consensus 105 ~~-~R~~v~I~TK~~~~~~~-~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~G 182 (292)
T 4exb_A 105 RG-QREHWVIVSKVGEEFVD-GQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREG 182 (292)
T ss_dssp TT-TGGGCEEEEEESBC--C-CSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTT
T ss_pred cc-CCCcEEEEEeeccccCC-CCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCC
Confidence 95 89999999999864321 112345789999999999999999999999999999 4434445 8999999999999
Q ss_pred CeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccc
Q 025707 156 KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235 (249)
Q Consensus 156 ~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~ 235 (249)
+||+||||||++++++++++. ++++|++||++++.. .+++++|+++||+|++|+||++|+|+++ ...
T Consensus 183 kir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~~----------~g~ 249 (292)
T 4exb_A 183 LIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACLG----------AGQ 249 (292)
T ss_dssp SEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC------------------C
T ss_pred CceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCCC----------CCC
Confidence 999999999999999999887 899999999999875 7899999999999999999999999765 344
Q ss_pred cCCCcceeeeee
Q 025707 236 CFSSISVSFCFI 247 (249)
Q Consensus 236 ~~~~~~~~~~~~ 247 (249)
+.++++++|++.
T Consensus 250 t~aqvaL~w~l~ 261 (292)
T 4exb_A 250 DPVRASFELVFD 261 (292)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 556788888764
No 10
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-52 Score=367.46 Aligned_cols=213 Identities=30% Similarity=0.484 Sum_probs=190.8
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
..| ||+||++|++||+||||||+. ||...+++++.++|+.|+++|||+||||+.||+|.+|+.||++|+. .+|+
T Consensus 36 ~~m-yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~ 111 (367)
T 3lut_A 36 LQF-YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS 111 (367)
T ss_dssp CCS-EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG
T ss_pred hhc-eeecCCCCCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCc
Confidence 468 999999999999999999842 4445688999999999999999999999999988999999999987 4799
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
+++|+||+++... .....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++|+||+|||||
T Consensus 112 ~v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn 189 (367)
T 3lut_A 112 SLVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSR 189 (367)
T ss_dssp GCEEEEEESBCCS--SGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred eEEEEeccccCCC--CccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecC
Confidence 9999999965321 11234578999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhc------CCceEEeeecCccccch-hhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 165 ASPDTIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 165 ~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
|+++++++++.. .+++++|++||++++.. +.+++++|+++||+|++|+||++|+|+|++..
T Consensus 190 ~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~ 257 (367)
T 3lut_A 190 WSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred CCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCC
Confidence 999999888653 57999999999999875 45899999999999999999999999999653
No 11
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=3.6e-51 Score=360.45 Aligned_cols=218 Identities=27% Similarity=0.388 Sum_probs=187.3
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcC-------CCchHHHHHHHHHc-
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG-------PYTNEILLGKALKE- 80 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg-------~g~se~~lg~~l~~- 80 (249)
|+||+||++|++||+||||||++|+ ..+++++.++|+.|+++|||+||||+.|| .|.+|+.||++|+.
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~ 76 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCeeecCCCCCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc
Confidence 7899999999999999999998764 34789999999999999999999999996 67999999999986
Q ss_pred CCCCCeEEEecccccccC---CcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCC---------------C--CCC
Q 025707 81 LPRENIQVATKFGFVELG---FTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD---------------T--SVP 140 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~---~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~---------------~--~~~ 140 (249)
.+|++++|+||++..... +.....+.+++.+++++++||+|||+||||+|++|||. . ..+
T Consensus 77 ~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~ 156 (346)
T 1lqa_A 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC
Confidence 479999999999743110 00001247899999999999999999999999999993 3 457
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc------CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccC
Q 025707 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl 214 (249)
++++|++|++|+++|+||+||||||+.++++++... .+++++|++||++++..+.+++++|+++||+|++|+||
T Consensus 157 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL 236 (346)
T 1lqa_A 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecch
Confidence 899999999999999999999999999888776532 46999999999999976688999999999999999999
Q ss_pred cccccCCCCCCCCCCC
Q 025707 215 GRGFFGGKAVVESVPL 230 (249)
Q Consensus 215 ~~G~l~g~~~~~~~~~ 230 (249)
++|+|++++.....|+
T Consensus 237 ~~G~L~g~~~~~~~p~ 252 (346)
T 1lqa_A 237 GFGTLTGKYLNGAKPA 252 (346)
T ss_dssp GGGGGGTTTGGGCCCT
T ss_pred hhhhhcCccccccCCC
Confidence 9999999854333333
No 12
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=4.3e-51 Score=356.03 Aligned_cols=236 Identities=23% Similarity=0.320 Sum_probs=200.2
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCC
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~ 85 (249)
.|++++||+++++||+||||||++|+ |+ .+++++.++|+.|++.|||+||||+.||.|.+|+.+|++|++ .+|++
T Consensus 22 ~M~~~~Lg~~~~~vs~lglGt~~~g~-~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 98 (319)
T 1ur3_M 22 LVQRITIAPQGPEFSRFVMGYWRLMD-WN--MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRER 98 (319)
T ss_dssp CCCEEECSTTCCEEESSEEECTTTTT-TT--CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTT
T ss_pred hCceEECCCCCcccccccEeccccCC-CC--CCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCe
Confidence 48999999999999999999999987 52 478999999999999999999999999999999999999986 46999
Q ss_pred eEEEecccccccCC---cccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 86 IQVATKFGFVELGF---TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 86 ~~I~tK~~~~~~~~---~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
++|+||++...... .....+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++|+||+|||
T Consensus 99 v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGv 178 (319)
T 1ur3_M 99 MEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGV 178 (319)
T ss_dssp CEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEE
T ss_pred EEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEe
Confidence 99999998642110 011235789999999999999999999999999999988889999999999999999999999
Q ss_pred CCCCHHHHHHHhhcC--CceEEeeecCccccch-hhhHHHHHHHhCCcEEecccCcccccCCCCC-------CCCCCCCc
Q 025707 163 SEASPDTIRRAHAVH--PITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAV-------VESVPLDS 232 (249)
Q Consensus 163 s~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~-------~~~~~~~~ 232 (249)
|||++++++++.+.. +++++|++||++++.. +.+++++|+++||++++|+||++|.|..... ...++ ..
T Consensus 179 Sn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~l~~ia-~~ 257 (319)
T 1ur3_M 179 SNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRDELAVVA-EE 257 (319)
T ss_dssp ESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSCGGGHHHHHHHHHHH-HH
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCCchhHHHHHHHHHHH-HH
Confidence 999999999988763 7999999999999875 3679999999999999999999999864200 00011 12
Q ss_pred ccccC-CCcceeeeee
Q 025707 233 FLVCF-SSISVSFCFI 247 (249)
Q Consensus 233 ~~~~~-~~~~~~~~~~ 247 (249)
+..+. ++++++|++.
T Consensus 258 ~g~t~~aqvaL~w~l~ 273 (319)
T 1ur3_M 258 LNAGSIEQVVNAWVLR 273 (319)
T ss_dssp TTCSCHHHHHHHHHHT
T ss_pred cCCChHHHHHHHHHHh
Confidence 33344 6778888764
No 13
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=3.3e-51 Score=350.10 Aligned_cols=218 Identities=24% Similarity=0.349 Sum_probs=191.1
Q ss_pred cccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCC
Q 025707 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPR 83 (249)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r 83 (249)
.+.|++++|+ +|++||.||||||+++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 3 ~~~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R 71 (276)
T 3f7j_A 3 TSLKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAR 71 (276)
T ss_dssp SSTTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCG
T ss_pred cCCcceEECC-CCCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCc
Confidence 4679999996 8999999999999864 468899999999999999999999999 79999999985 589
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
++++|+||++... .+++.+++++++||++||+||||+|++|+|+... .+++|++|++|+++|+||+||||
T Consensus 72 ~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvS 141 (276)
T 3f7j_A 72 EELFITSKVWNED---------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVS 141 (276)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEec
Confidence 9999999997543 5799999999999999999999999999998755 89999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcc
Q 025707 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSIS 241 (249)
Q Consensus 164 ~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~ 241 (249)
||++++++++++. .++.++|++||++.+. .+++++|+++||++++|+||++|.|........+++ .+..+.++++
T Consensus 142 n~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~-~~g~t~aqva 218 (276)
T 3f7j_A 142 NFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDNEVLTQIAE-KHNKSVAQVI 218 (276)
T ss_dssp SCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHH-HHTCCHHHHH
T ss_pred cCCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCccCCCHHHHHHHH-HhCCCHHHHH
Confidence 9999999999876 4567999999999874 789999999999999999999998876533233333 4556667888
Q ss_pred eeeeee
Q 025707 242 VSFCFI 247 (249)
Q Consensus 242 ~~~~~~ 247 (249)
++|++.
T Consensus 219 l~w~l~ 224 (276)
T 3f7j_A 219 LRWDLQ 224 (276)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888764
No 14
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.7e-51 Score=352.16 Aligned_cols=216 Identities=23% Similarity=0.433 Sum_probs=191.3
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
+.|+|++|| |++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 22 ~~m~~~~l~--g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 88 (298)
T 3up8_A 22 SMMHAVSSN--GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRA 88 (298)
T ss_dssp GSCCEECCT--TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGG
T ss_pred ccCceEEeC--CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChH
Confidence 468999997 99999999999975 358899999999999999999999999 89999999987 5899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
+++|+||++.. +.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++|+||+|||||
T Consensus 89 ~v~I~TK~~~~---------~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 159 (298)
T 3up8_A 89 DVFLTTKVWVD---------NYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISN 159 (298)
T ss_dssp GCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred HEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcC
Confidence 99999999754 367999999999999999999999999999999889999999999999999999999999
Q ss_pred CCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcce
Q 025707 165 ASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISV 242 (249)
Q Consensus 165 ~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~ 242 (249)
|++++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++|.|........+++ .+..+.+++++
T Consensus 160 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~ia~-~~g~s~aqvaL 236 (298)
T 3up8_A 160 FNTTQMEEAARLSDAPIATNQVEYHPYLDQ--TKVLQTARRLGMSLTSYYAMANGKVPADPLLTEIGG-RHGKTAAQVAL 236 (298)
T ss_dssp CCHHHHHHHHHHCSSCEEEEEEECBTTBCC--HHHHHHHHHHTCEEEEECTTGGGHHHHCHHHHHHHH-HHTCCHHHHHH
T ss_pred CCHHHHHHHHHhCCCCceEEEEeccccccc--HHHHHHHHHCCCEEEEECCCcCCcccccchHHHHHH-HcCCCHHHHHH
Confidence 9999999998774 799999999999874 789999999999999999999998765532222222 44556667888
Q ss_pred eeeee
Q 025707 243 SFCFI 247 (249)
Q Consensus 243 ~~~~~ 247 (249)
+|++.
T Consensus 237 ~w~l~ 241 (298)
T 3up8_A 237 RWLVQ 241 (298)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 88764
No 15
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=6.6e-51 Score=349.12 Aligned_cols=216 Identities=28% Similarity=0.399 Sum_probs=189.2
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCC
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~ 85 (249)
+|++++| ++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|++
T Consensus 25 ~m~~~~L-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 92 (283)
T 3o0k_A 25 TVPTVKL-NDGNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIARAD 92 (283)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSSCGGG
T ss_pred CCceEEC-CCCCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCCccc
Confidence 6999999 7899999999999975 568999999999999999999999999 69999999996 47999
Q ss_pred eEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-CCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
++|+||++... .+++.+++++++||+|||+||||+|++|||+.. .+.+++|++|++|+++|+||+|||||
T Consensus 93 ~~i~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn 163 (283)
T 3o0k_A 93 IFLTTKLWNSD---------QGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSN 163 (283)
T ss_dssp CEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEEEccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEEecc
Confidence 99999998643 568999999999999999999999999999876 46789999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcce
Q 025707 165 ASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISV 242 (249)
Q Consensus 165 ~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~ 242 (249)
|++++++++++. .++.++|++||++.+. .+++++|+++||++++|+||++|.|...+....+++ .+..+.+++++
T Consensus 164 ~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~ia~-~~g~t~aqvaL 240 (283)
T 3o0k_A 164 FRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQGKLLEDPTLKSIAE-KHAKSVAQIIL 240 (283)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC-CTTCHHHHHHHH-HHTSCHHHHHH
T ss_pred CcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCCCCccccchHHHHHHH-HhCCCHHHHHH
Confidence 999999998875 4568999999999874 689999999999999999999998876533233332 45566678888
Q ss_pred eeeee
Q 025707 243 SFCFI 247 (249)
Q Consensus 243 ~~~~~ 247 (249)
+|++.
T Consensus 241 ~w~l~ 245 (283)
T 3o0k_A 241 RWHIE 245 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
No 16
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=1e-50 Score=351.87 Aligned_cols=216 Identities=24% Similarity=0.356 Sum_probs=190.0
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCC
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~ 85 (249)
.|++++|+ +|++||.||||||+++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|++
T Consensus 39 ~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 107 (310)
T 3b3e_A 39 LKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREE 107 (310)
T ss_dssp TTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHSSSCGGG
T ss_pred ccceEECC-CCCeeCceeeeCCcCC-------CHHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHhcCCCcce
Confidence 49999996 8999999999999864 468899999999999999999999999 69999999986 58999
Q ss_pred eEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC
Q 025707 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 165 (249)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 165 (249)
++|+||++... .+++.+++++++||++||+||||+|++|||+... .+++|++|++|+++|+||+||||||
T Consensus 108 v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-~~e~~~al~~l~~~Gkir~iGvSn~ 177 (310)
T 3b3e_A 108 LFITSKVWNED---------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNF 177 (310)
T ss_dssp CEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSC-HHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEEeCCCCC---------CCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCccc-HHHHHHHHHHHHHcCCcceEeecCC
Confidence 99999997543 5799999999999999999999999999998765 8999999999999999999999999
Q ss_pred CHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCccee
Q 025707 166 SPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISVS 243 (249)
Q Consensus 166 ~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~~ 243 (249)
++++++++++. .++.++|++||++.+. .+++++|+++||+|++|+||++|.|.+......+++ .+..+.++++++
T Consensus 178 ~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~iA~-~~g~t~aqvaL~ 254 (310)
T 3b3e_A 178 QVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDNEVLTQIAE-KHNKSVAQVILR 254 (310)
T ss_dssp CHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHH-HHTCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCcceeeeeccCccCC--HHHHHHHHHcCCEEEEeccccCCCcCCCHHHHHHHH-HhCCCHHHHHHH
Confidence 99999999876 4578999999999874 789999999999999999999998876533333333 455666788888
Q ss_pred eeee
Q 025707 244 FCFI 247 (249)
Q Consensus 244 ~~~~ 247 (249)
|++.
T Consensus 255 w~l~ 258 (310)
T 3b3e_A 255 WDLQ 258 (310)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8764
No 17
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=1e-50 Score=347.72 Aligned_cols=219 Identities=23% Similarity=0.341 Sum_probs=189.3
Q ss_pred ccccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CC
Q 025707 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LP 82 (249)
Q Consensus 5 ~~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~ 82 (249)
.|..|++++| ++|++||.||||||+++ +++++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+
T Consensus 5 ~~~~m~~~~l-~~g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~ 73 (281)
T 1vbj_A 5 FMALTQSLKL-SNGVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVP 73 (281)
T ss_dssp TTCCCCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSC
T ss_pred cCCCCceEEC-CCCCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCC
Confidence 4667999999 89999999999999864 357899999999999999999999999 79999999986 57
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
|++++|+||++.. +.+++.+++++++||++||+||||+|++|||+ ..+..++|++|++|+++|+||+|||
T Consensus 74 R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGv 143 (281)
T 1vbj_A 74 REELFVTTKLWNS---------DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGV 143 (281)
T ss_dssp GGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEE
T ss_pred hhHEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEe
Confidence 9999999999753 36799999999999999999999999999998 6778999999999999999999999
Q ss_pred CCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCc
Q 025707 163 SEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSI 240 (249)
Q Consensus 163 s~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~ 240 (249)
|||++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|.+........+++ .+..+.+++
T Consensus 144 Sn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~~~~l~~ia~-~~g~s~aqv 220 (281)
T 1vbj_A 144 SNFHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHLVEDARLKAIGG-KYGKTAAQV 220 (281)
T ss_dssp ESCCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTTTTCHHHHHHHH-TTTCCHHHH
T ss_pred eCCCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCCCCCHHHHHHHH-HhCCCHHHH
Confidence 99999999999886 4568999999999875 679999999999999999999995433211112222 344566788
Q ss_pred ceeeeee
Q 025707 241 SVSFCFI 247 (249)
Q Consensus 241 ~~~~~~~ 247 (249)
+++|++.
T Consensus 221 aL~w~l~ 227 (281)
T 1vbj_A 221 MLRWEIQ 227 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888764
No 18
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=1.4e-50 Score=347.20 Aligned_cols=217 Identities=23% Similarity=0.358 Sum_probs=186.7
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
.+|++++| ++|++||.||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 9 ~~m~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R~ 76 (283)
T 2wzm_A 9 AAIPTVTL-NDDNTLPVVGIGVGELS--------DSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRD 76 (283)
T ss_dssp -CCCEEEC-TTSCEEESEEEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCGG
T ss_pred CCCceEEC-CCCCEEcceeEECCCCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCcc
Confidence 57999999 99999999999999753 47899999999999999999999999 79999999986 5799
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-CCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
+++|+||++.. +.+++.+++++++||++||+||||+|++|||+.. .+..++|++|++|+++|+||+||||
T Consensus 77 ~v~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 147 (283)
T 2wzm_A 77 EIYVTTKLATP---------DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVC 147 (283)
T ss_dssp GCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEc
Confidence 99999999753 3679999999999999999999999999999874 4678999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcc
Q 025707 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSIS 241 (249)
Q Consensus 164 ~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~ 241 (249)
||++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|.+........+++ .+..+.++++
T Consensus 148 n~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~-~~g~s~aqva 224 (283)
T 2wzm_A 148 NFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRLLDHPAVTAIAE-AHGRTAAQVL 224 (283)
T ss_dssp SCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGGGGCHHHHHHHH-HHTCCHHHHH
T ss_pred CCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCcccchHHHHHHHH-HhCCCHHHHH
Confidence 9999999998876 4569999999999875 579999999999999999999996543321122222 3445666788
Q ss_pred eeeeee
Q 025707 242 VSFCFI 247 (249)
Q Consensus 242 ~~~~~~ 247 (249)
++|++.
T Consensus 225 L~w~l~ 230 (283)
T 2wzm_A 225 LRWSIQ 230 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
No 19
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=2.2e-50 Score=346.98 Aligned_cols=218 Identities=22% Similarity=0.352 Sum_probs=189.6
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
.+.++.+| ++|++||.||||||+++. .+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 8 ~~~~~~~l-~~g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~ 76 (288)
T 4f40_A 8 VDKAMVTL-SNGVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPRE 76 (288)
T ss_dssp TTTCEEEC-TTSCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGG
T ss_pred ccCCeEEC-CCCCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChh
Confidence 45678888 889999999999998764 37899999999999999999999999 89999999986 5899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-------CCHHHHHHHHHHHHHcCCe
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKI 157 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~i 157 (249)
+++|+||++... .+++.+++++++||+|||+||||+|++|+|+.. .+.+++|++|++|+++|+|
T Consensus 77 ~~~I~TK~~~~~---------~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gki 147 (288)
T 4f40_A 77 DVFITTKLWNTE---------QGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKV 147 (288)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSE
T ss_pred hEEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCc
Confidence 999999998643 578999999999999999999999999999863 5678999999999999999
Q ss_pred eEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccc
Q 025707 158 KYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235 (249)
Q Consensus 158 r~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~ 235 (249)
|+||||||++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|.|++.+....+++ .+..
T Consensus 148 r~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~-~~g~ 224 (288)
T 4f40_A 148 RAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLSNPILSAIGA-KYNK 224 (288)
T ss_dssp EEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGGCHHHHHHHH-HHTC
T ss_pred cEEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCcccccHHHHHHHH-HhCC
Confidence 9999999999999999876 4689999999999885 679999999999999999999999887633333333 4556
Q ss_pred cCCCcceeeeee
Q 025707 236 CFSSISVSFCFI 247 (249)
Q Consensus 236 ~~~~~~~~~~~~ 247 (249)
+.++++++|++.
T Consensus 225 t~aqvaL~w~l~ 236 (288)
T 4f40_A 225 TAAQVILRWNIQ 236 (288)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 777888888764
No 20
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=1.7e-50 Score=346.06 Aligned_cols=215 Identities=23% Similarity=0.314 Sum_probs=180.8
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~ 86 (249)
|++++| ++|++||.||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|+++
T Consensus 3 M~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~~ 70 (278)
T 1hw6_A 3 VPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDDL 70 (278)
T ss_dssp CCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGGC
T ss_pred CceEEC-CCCCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChhhE
Confidence 899999 89999999999999864 36789999999999999999999999 79999999986 589999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCCeeEEEcCCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSEA 165 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 165 (249)
+|+||++.. +.+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|+++|+||+||||||
T Consensus 71 ~i~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 141 (278)
T 1hw6_A 71 FITTKLWND---------RHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNH 141 (278)
T ss_dssp EEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEeeCCC---------CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCC
Confidence 999999753 356889999999999999999999999999987 4678999999999999999999999999
Q ss_pred CHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc--cCCCCCCCCCCCCcccccCCCcc
Q 025707 166 SPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF--FGGKAVVESVPLDSFLVCFSSIS 241 (249)
Q Consensus 166 ~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~--l~g~~~~~~~~~~~~~~~~~~~~ 241 (249)
++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|. +...+....+++ .+..+.++++
T Consensus 142 ~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~~~~~~~~~l~~ia~-~~g~s~aqva 218 (278)
T 1hw6_A 142 LVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGKYDLFGAEPVTAAAA-AHGKTPAQAV 218 (278)
T ss_dssp CHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGSSCCTTSHHHHHHHH-HHTCCHHHHH
T ss_pred CHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCCccccccHHHHHHHH-HhCCCHHHHH
Confidence 99999998876 4569999999999885 689999999999999999999993 211111111111 3345566788
Q ss_pred eeeeee
Q 025707 242 VSFCFI 247 (249)
Q Consensus 242 ~~~~~~ 247 (249)
++|++.
T Consensus 219 L~w~l~ 224 (278)
T 1hw6_A 219 LRWHLQ 224 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
No 21
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=3e-48 Score=339.01 Aligned_cols=194 Identities=25% Similarity=0.375 Sum_probs=175.9
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
.+|++++| ++|++||.||||||+++. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++
T Consensus 4 ~~m~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~ 74 (324)
T 3ln3_A 4 SXQHCVXL-NDGHLIPALGFGTYXPXE-----VPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGV 74 (324)
T ss_dssp --CCEEEC-TTSCEEESSEEECCCCTT-----SCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEC-CCCCCcCCeeecCCcccC-----CChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCC
Confidence 46999999 899999999999998752 4789999999999999999999999999 79999999986
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCH
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~ 141 (249)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 75 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (324)
T 3ln3_A 75 VXREDLFVTTKLWCTC---------FRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDF 145 (324)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred cccceeEEEeeeCCcc---------CCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCH
Confidence 4899999999997543 67999999999999999999999999999975 3468
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
+++|++|++|+++|+||+||||||++++++++++.. ++.++|++||++.+ +.+++++|+++||+|++|+||++|
T Consensus 146 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~g 223 (324)
T 3ln3_A 146 CDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQ 223 (324)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccc--hHHHHHHHHHcCCEEEEecCCCCC
Confidence 999999999999999999999999999999998773 27799999999876 378999999999999999999999
Q ss_pred ccC
Q 025707 218 FFG 220 (249)
Q Consensus 218 ~l~ 220 (249)
.+.
T Consensus 224 ~~~ 226 (324)
T 3ln3_A 224 RYX 226 (324)
T ss_dssp CCT
T ss_pred Ccc
Confidence 864
No 22
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=1e-48 Score=342.14 Aligned_cols=195 Identities=25% Similarity=0.347 Sum_probs=176.3
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
..|++++| ++|++||.||||||++++ ..+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 5 ~~~~~~~L-~tg~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 76 (326)
T 3buv_A 5 AASHRIPL-SDGNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGK 76 (326)
T ss_dssp SSCCEEEC-TTSCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCC
Confidence 35789999 899999999999999874 23678899999999999999999999999 79999999986
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCH
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~ 141 (249)
.+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 77 ~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (326)
T 3buv_A 77 VRREDIFYCGKLWAT---------NHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNL 147 (326)
T ss_dssp CCGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred CChhHeEEEeeeCCC---------cCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccH
Confidence 479999999999753 267999999999999999999999999999964 2367
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC--C--ceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--P--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~--~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
+++|++|++|+++|+||+||||||+.++++++++.. + ++++|++||++.+. .+++++|+++||+|++|+||++|
T Consensus 148 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 225 (326)
T 3buv_A 148 CATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITAYSPLGTS 225 (326)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEEeccccCC
Confidence 899999999999999999999999999999998763 4 77999999998874 68999999999999999999999
Q ss_pred ccC
Q 025707 218 FFG 220 (249)
Q Consensus 218 ~l~ 220 (249)
.|+
T Consensus 226 ~l~ 228 (326)
T 3buv_A 226 RNP 228 (326)
T ss_dssp CCT
T ss_pred ccc
Confidence 987
No 23
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=1.8e-49 Score=341.62 Aligned_cols=217 Identities=24% Similarity=0.340 Sum_probs=186.1
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
.+|+|++| ++|++||.||||||+++ +.+++.++|++|+++|||+||||+.|| +|+.+|++++. .+|+
T Consensus 11 ~~~~~v~L-n~G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r~ 79 (290)
T 4gie_A 11 CNYNCVTL-HNSVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPRE 79 (290)
T ss_dssp SSSCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEc-CCCCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcch
Confidence 47999999 89999999999999754 467899999999999999999999999 89999999987 6899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
+++|+||++... .+++.+++++++||+|||+||||+|++|+|+. .+..++|++|++|+++||||+||+||
T Consensus 80 ~~~i~tk~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvSn 149 (290)
T 4gie_A 80 EVWVTTKVWNSD---------QGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVSN 149 (290)
T ss_dssp GSEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred hccccccccccC---------CChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeecC
Confidence 999999997654 57899999999999999999999999999876 56889999999999999999999999
Q ss_pred CCHHHHHHHhhcCC--ceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCC---CCCCCcccccCCC
Q 025707 165 ASPDTIRRAHAVHP--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE---SVPLDSFLVCFSS 239 (249)
Q Consensus 165 ~~~~~l~~~~~~~~--~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~---~~~~~~~~~~~~~ 239 (249)
+++++++++..... +.++|+++++..+ ..+++++|+++||++++|+||++|.|+++.... .++ ..+..+.++
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~~~~l~~iA-~~~g~t~aq 226 (290)
T 4gie_A 150 FEPHHLTELFKSCKIRPMVNQVELHPLFQ--QRTLREFCKQHNIAITAWSPLGSGEEAGILKNHVLGEIA-KKHNKSPAQ 226 (290)
T ss_dssp CCHHHHHHHHTTCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCSSGGGCGGGCHHHHHHH-HHHTCCHHH
T ss_pred CCHHHHHHHHHhccCCCceeeEeccccch--hHHHHHHHHHcCceEeeecccccccccccchhHHHHHHH-HHhCCCHHH
Confidence 99999999988754 4455655555444 588999999999999999999999998874322 122 244556678
Q ss_pred cceeeeee
Q 025707 240 ISVSFCFI 247 (249)
Q Consensus 240 ~~~~~~~~ 247 (249)
++++|++.
T Consensus 227 vaL~w~l~ 234 (290)
T 4gie_A 227 VVIRWDIQ 234 (290)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888763
No 24
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=4.8e-48 Score=337.47 Aligned_cols=195 Identities=28% Similarity=0.416 Sum_probs=176.3
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
.+|++++| ++|++||+||||||++|. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 3 ~~~~~~~L-~tg~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 73 (323)
T 1afs_A 3 SISLRVAL-NDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGT 73 (323)
T ss_dssp GGGCEEEC-TTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCC
Confidence 35899999 799999999999998753 3668899999999999999999999999 79999999986
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCH
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~ 141 (249)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 74 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~ 144 (323)
T 1afs_A 74 VKREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDI 144 (323)
T ss_dssp CCGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCH
T ss_pred CChHHeEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCH
Confidence 4899999999997532 56889999999999999999999999999942 2367
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
+++|++|++|+++|+||+||||||+.++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 222 (323)
T 1afs_A 145 CDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGSS 222 (323)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccCC
Confidence 899999999999999999999999999999998863 569999999998874 68999999999999999999999
Q ss_pred ccCC
Q 025707 218 FFGG 221 (249)
Q Consensus 218 ~l~g 221 (249)
.|++
T Consensus 223 ~l~~ 226 (323)
T 1afs_A 223 RDKT 226 (323)
T ss_dssp CCTT
T ss_pred cccc
Confidence 9875
No 25
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=4.4e-48 Score=338.34 Aligned_cols=195 Identities=26% Similarity=0.332 Sum_probs=176.4
Q ss_pred ccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEEEeccccccc
Q 025707 20 EVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVEL 97 (249)
Q Consensus 20 ~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I~tK~~~~~~ 97 (249)
.+|+||||||++|+ ..+++++.++|+.|++.|||+||||+.||.|.+|+.||++|+. ..|++++|+||++...
T Consensus 4 ~~~~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~- 78 (327)
T 1gve_A 4 ARPATVLGAMEMGR----RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMF- 78 (327)
T ss_dssp CCCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCT-
T ss_pred CCCCeEEcccccCC----CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCC-
Confidence 47899999999875 1478999999999999999999999999888999999999975 2478899999996432
Q ss_pred CCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc-
Q 025707 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV- 176 (249)
Q Consensus 98 ~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 176 (249)
..+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++|+||+||||||+.++++++.+.
T Consensus 79 -----~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 153 (327)
T 1gve_A 79 -----GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLC 153 (327)
T ss_dssp -----TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 12468999999999999999999999999999999889999999999999999999999999999999887654
Q ss_pred -----CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 177 -----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 177 -----~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
.+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 154 ~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 206 (327)
T 1gve_A 154 KKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYK 206 (327)
T ss_dssp HHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCC
T ss_pred HHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCccc
Confidence 568999999999999776789999999999999999999999999843
No 26
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=4.9e-48 Score=341.95 Aligned_cols=200 Identities=27% Similarity=0.339 Sum_probs=175.6
Q ss_pred CCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEEEecc
Q 025707 15 GTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKF 92 (249)
Q Consensus 15 g~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I~tK~ 92 (249)
+..+..||+||||||++|+ ..+++++.++|+.|+++|||+||||+.||.|.+|+.||++|+. ..|++++|+||+
T Consensus 32 ~~~~~~ip~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK~ 107 (360)
T 2bp1_A 32 SRPPPPRVASVLGTMEMGR----RMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKA 107 (360)
T ss_dssp ------CCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEEE
T ss_pred CCCCCCCCCEEECchhhCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEeee
Confidence 3446679999999999875 2478999999999999999999999999988999999999973 236679999999
Q ss_pred cccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHH
Q 025707 93 GFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172 (249)
Q Consensus 93 ~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 172 (249)
+... ..+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++|+||+||||||+.+++++
T Consensus 108 ~~~~------~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~ 181 (360)
T 2bp1_A 108 NPWD------GKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAE 181 (360)
T ss_dssp CCCT------TCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHH
T ss_pred cCCC------CCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEEeCCCHHHHHH
Confidence 6432 1246899999999999999999999999999999988999999999999999999999999999999988
Q ss_pred Hhhc------CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 173 AHAV------HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 173 ~~~~------~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
+... .+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 182 ~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 239 (360)
T 2bp1_A 182 ICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYK 239 (360)
T ss_dssp HHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCC
T ss_pred HHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEecccccCcccCCcc
Confidence 7654 568999999999998766789999999999999999999999999853
No 27
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=2.9e-48 Score=337.39 Aligned_cols=221 Identities=25% Similarity=0.385 Sum_probs=185.1
Q ss_pred ccccCCcee-cCC-CCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--
Q 025707 5 KKLQVPRVK-LGT-QGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-- 80 (249)
Q Consensus 5 ~~~~m~~~~-lg~-~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-- 80 (249)
.+.+|++++ ||+ +|++||+|||||++++. +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 2 ~~~~m~~~~~l~~~tg~~v~~lglGt~~~~~------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~ 72 (312)
T 1zgd_A 2 GSVEIPTKVLTNTSSQLKMPVVGMGSAPDFT------CKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAI 72 (312)
T ss_dssp ---CCCEEECTTSTTCCEEESBCBCCSCCTT------CCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHH
T ss_pred CCCCCchhhhcCCCCCCCCCceeEcCcccCC------CHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHH
Confidence 456789999 987 79999999999954322 346789999999999999999999999 89999999986
Q ss_pred ----CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC----------------CCC
Q 025707 81 ----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT----------------SVP 140 (249)
Q Consensus 81 ----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~----------------~~~ 140 (249)
.+|++++|+||++.. +.+++.+++++++||++||+||||+|++|||+. ..+
T Consensus 73 ~~g~~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~ 143 (312)
T 1zgd_A 73 ELGLVTRDDLFVTSKLWVT---------ENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFD 143 (312)
T ss_dssp HTTSCCGGGCEEEEEECGG---------GCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCC
T ss_pred hcCCCcchheEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCcccccccccccccccc
Confidence 479999999999754 257899999999999999999999999999963 246
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc
Q 025707 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
.+++|++|++|+++|+||+||||||+.++++++++.. +++++|++||++++. .+++++|+++||+|++|+||++|.
T Consensus 144 ~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~ 221 (312)
T 1zgd_A 144 VKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTAFSPVRKGA 221 (312)
T ss_dssp HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTT
T ss_pred HHHHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEEecCCCCCC
Confidence 8899999999999999999999999999999998873 689999999999874 689999999999999999999997
Q ss_pred cCCCCCCCCCCC-------CcccccCCCcceeeeee
Q 025707 219 FGGKAVVESVPL-------DSFLVCFSSISVSFCFI 247 (249)
Q Consensus 219 l~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 247 (249)
+.+... .+.. ..+..+.++++++|++.
T Consensus 222 ~~~~~~--~~~~~~l~~ia~~~g~s~aqvaL~w~l~ 255 (312)
T 1zgd_A 222 SRGPNE--VMENDMLKEIADAHGKSVAQISLRWLYE 255 (312)
T ss_dssp TTSSCT--TTTCHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CCCCcc--ccccHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 654311 1111 12334556777787753
No 28
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=1e-47 Score=334.67 Aligned_cols=189 Identities=30% Similarity=0.481 Sum_probs=172.9
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CC
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LP 82 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~ 82 (249)
+++++| ++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+
T Consensus 5 ~~~~~l-~~g~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~ 72 (317)
T 1qwk_A 5 TASIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVK 72 (317)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCC
T ss_pred cceEEC-CCCCEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCC
Confidence 478899 7999999999999863 678999999999999999999999999 79999999986 48
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC---------CCCHHHHHHHHHHHHH
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------SVPIEETIGEMKKLVE 153 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~---------~~~~~~~~~~l~~l~~ 153 (249)
|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|++
T Consensus 73 R~~~~i~TK~~~~---------~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~ 143 (317)
T 1qwk_A 73 REELFITTKAWTH---------ELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYK 143 (317)
T ss_dssp GGGCEEEEEECTT---------TSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHH
T ss_pred hhheEEEeeeCCC---------cCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHH
Confidence 9999999999753 257889999999999999999999999999974 3478999999999999
Q ss_pred cCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccC
Q 025707 154 EGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (249)
Q Consensus 154 ~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~ 220 (249)
+|+||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|.|+
T Consensus 144 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~ 210 (317)
T 1qwk_A 144 AGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTSYATLGSPGRV 210 (317)
T ss_dssp TTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCSCCEE
T ss_pred cCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEEecCccCCCcc
Confidence 99999999999999999999877 3579999999999874 68999999999999999999999876
No 29
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1e-48 Score=337.35 Aligned_cols=216 Identities=25% Similarity=0.292 Sum_probs=182.9
Q ss_pred cccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCC
Q 025707 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPR 83 (249)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r 83 (249)
...|++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 22 ~~~~~~~~L-~tg~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R 89 (296)
T 1mzr_A 22 LANPTVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNR 89 (296)
T ss_dssp -CCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCG
T ss_pred CCCCceEEC-CCCCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCc
Confidence 357899999 6899999999999975 358899999999999999999999999 79999999986 579
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
++++|+||++... . +.+++++++||+|||+||||+|++|||+. ..+.+++|++|++|+++|+||+|||
T Consensus 90 ~~v~I~TK~~~~~---------~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGv 158 (296)
T 1mzr_A 90 EELFITTKLWNDD---------H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGV 158 (296)
T ss_dssp GGCEEEEEECGGG---------T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred ccEEEEeccCCCc---------H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEE
Confidence 9999999997532 2 77999999999999999999999999987 4789999999999999999999999
Q ss_pred CCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccccc--CCCCCCCCCCCCcccccCC
Q 025707 163 SEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF--GGKAVVESVPLDSFLVCFS 238 (249)
Q Consensus 163 s~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l--~g~~~~~~~~~~~~~~~~~ 238 (249)
|||++++++++++. .++.++|++||++++. .+++++|+++||++++|+||++|.+ ........+++ .+..+.+
T Consensus 159 Sn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~~l~~~~l~~ia~-~~g~s~a 235 (296)
T 1mzr_A 159 CNFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLAD-KYGKTPA 235 (296)
T ss_dssp ESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTCTTTTTSHHHHHHHH-HHTCCHH
T ss_pred eCCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEeccccCCcchhcChHHHHHHHH-HhCCCHH
Confidence 99999999998865 5678999999999875 6799999999999999999999943 11111111111 3344556
Q ss_pred Ccceeeeee
Q 025707 239 SISVSFCFI 247 (249)
Q Consensus 239 ~~~~~~~~~ 247 (249)
+++++|++.
T Consensus 236 qvaL~w~l~ 244 (296)
T 1mzr_A 236 QIVIRWHLD 244 (296)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 778888753
No 30
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=3.2e-47 Score=333.26 Aligned_cols=194 Identities=26% Similarity=0.376 Sum_probs=174.4
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------C
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~ 81 (249)
++++++| ++|++||.||||||+++. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .
T Consensus 4 ~~~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~~ 74 (331)
T 1s1p_A 4 KQQCVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSV 74 (331)
T ss_dssp --CEEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCEeCCeeEcCccCCC-----CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCCC
Confidence 4688999 899999999999998653 3678899999999999999999999999 79999999986 4
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHH
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIE 142 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~ 142 (249)
+|++++|+||++.. ..+++.+++++++||+|||+||||+|++|||+. ..+++
T Consensus 75 ~R~~~~I~TK~~~~---------~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~ 145 (331)
T 1s1p_A 75 KREDIFYTSKLWST---------FHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLC 145 (331)
T ss_dssp CGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHH
T ss_pred CchheEEEeccCCc---------cCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHH
Confidence 89999999999753 267999999999999999999999999999942 23678
Q ss_pred HHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc
Q 025707 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
++|++|++|+++|+||+||||||++++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|.
T Consensus 146 e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~ 223 (331)
T 1s1p_A 146 TTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQR 223 (331)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCC
T ss_pred HHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccCCc
Confidence 99999999999999999999999999999998863 669999999998874 679999999999999999999999
Q ss_pred cCC
Q 025707 219 FGG 221 (249)
Q Consensus 219 l~g 221 (249)
|++
T Consensus 224 l~~ 226 (331)
T 1s1p_A 224 DKR 226 (331)
T ss_dssp CTT
T ss_pred ccc
Confidence 875
No 31
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=1.6e-48 Score=339.02 Aligned_cols=216 Identities=23% Similarity=0.390 Sum_probs=188.9
Q ss_pred CceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CCC
Q 025707 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (249)
Q Consensus 10 ~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~r 83 (249)
.+.+| ++|++||.||||||+++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+++++ +.|
T Consensus 41 ~~~TL-n~G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r 109 (314)
T 3b3d_A 41 AKATL-HNGVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISR 109 (314)
T ss_dssp CEEEC-TTSCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCG
T ss_pred CcEEC-CCcCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCc
Confidence 46677 89999999999999864 357899999999999999999999999 89999999875 689
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
+++++.+|.+... .+++.+++++++||+|||+||||+|++|+|++ ....++|++|++|+++||||+||||
T Consensus 110 ~~~~i~~k~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvS 179 (314)
T 3b3d_A 110 EDLFITSKVWNAD---------LGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVS 179 (314)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccccccccCcCCC---------CCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEec
Confidence 9999999997654 67999999999999999999999999999876 4578999999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCccee
Q 025707 164 EASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISVS 243 (249)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~~ 243 (249)
||+.++++++.+..++..+|++||+..+..+.+++++|+++||++++|+||++|.|++++....+++ .+..+.++++++
T Consensus 180 n~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~~~~~~ia~-~~g~t~aqvaL~ 258 (314)
T 3b3d_A 180 NFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDHPVLADIAQ-TYNKSVAQIILR 258 (314)
T ss_dssp SCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHH-HTTCCHHHHHHH
T ss_pred CCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCchhhHHHHH-HcCCCHHHHHHH
Confidence 9999999999988776666666666666556889999999999999999999999999855444444 566777788888
Q ss_pred eeee
Q 025707 244 FCFI 247 (249)
Q Consensus 244 ~~~~ 247 (249)
|++.
T Consensus 259 w~l~ 262 (314)
T 3b3d_A 259 WDLQ 262 (314)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 32
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=1.8e-48 Score=336.05 Aligned_cols=213 Identities=24% Similarity=0.343 Sum_probs=182.0
Q ss_pred CceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CCC
Q 025707 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (249)
Q Consensus 10 ~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~r 83 (249)
..+.+|++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 15 ~~~~~~~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R 83 (298)
T 1vp5_A 15 VPKVTLNNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRR 83 (298)
T ss_dssp CCEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CceEeCCCCCCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCCh
Confidence 5677899999999999999975 347899999999999999999999999 79999999984 479
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
++++|+||++.. +.+++.+++++++||++||+||||+|++|||+. +.+++|++|++|+++|+||+||||
T Consensus 84 ~~v~I~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvS 152 (298)
T 1vp5_A 84 EELFVTTKLWVS---------DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVS 152 (298)
T ss_dssp GGCEEEEEECGG---------GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hhEEEEeccCCC---------CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEec
Confidence 999999999753 257899999999999999999999999999986 789999999999999999999999
Q ss_pred CCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc--cCCCCCCCCCCCCcccccCCC
Q 025707 164 EASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF--FGGKAVVESVPLDSFLVCFSS 239 (249)
Q Consensus 164 ~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~--l~g~~~~~~~~~~~~~~~~~~ 239 (249)
||++++++++++.. +++++|++||++++. .+++++|+++||++++|+||++|. +........+++ .+..+.++
T Consensus 153 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~~l~~~~l~~ia~-~~g~s~aq 229 (298)
T 1vp5_A 153 NFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIAE-KYGKTVAQ 229 (298)
T ss_dssp SCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGGGGGGGCHHHHHHHH-HHTCCHHH
T ss_pred CCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEecccccCCccccCcHHHHHHHH-HhCCCHHH
Confidence 99999999998864 569999999999875 679999999999999999999993 221111111221 34455667
Q ss_pred cceeeeee
Q 025707 240 ISVSFCFI 247 (249)
Q Consensus 240 ~~~~~~~~ 247 (249)
++++|++.
T Consensus 230 vaL~w~l~ 237 (298)
T 1vp5_A 230 VILRWLTQ 237 (298)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888753
No 33
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=1.1e-46 Score=328.87 Aligned_cols=190 Identities=28% Similarity=0.479 Sum_probs=172.3
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
..|++++| ++|++||+||||||+ .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 3 ~~m~~~~L-~tg~~v~~lglGt~~--------~~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 70 (322)
T 1mi3_A 3 ASIPDIKL-SSGHLMPSIGFGCWK--------LANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGL 70 (322)
T ss_dssp -CCCEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCEECCeeeeCCc--------CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCC
Confidence 45899999 799999999999986 2679999999999999999999999999 79999999986
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-----------------------
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT----------------------- 137 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~----------------------- 137 (249)
.+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+.
T Consensus 71 ~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (322)
T 1mi3_A 71 VKREEIFLTSKLWNN---------YHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFV 141 (322)
T ss_dssp CCGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCC
T ss_pred CChhhEEEEEeeCCC---------CCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCccccccccccccccccccc
Confidence 489999999999753 267999999999999999999999999999842
Q ss_pred --CCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 138 --SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 138 --~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
..+++++|++|++|+++|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||++++|+|
T Consensus 142 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 219 (322)
T 1mi3_A 142 YEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSS 219 (322)
T ss_dssp BCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECT
T ss_pred ccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEEECC
Confidence 236789999999999999999999999999999999876 4689999999999774 6899999999999999999
Q ss_pred Cccccc
Q 025707 214 LGRGFF 219 (249)
Q Consensus 214 l~~G~l 219 (249)
|++|.+
T Consensus 220 L~~G~~ 225 (322)
T 1mi3_A 220 FGPQSF 225 (322)
T ss_dssp TTTHHH
T ss_pred CCCCCc
Confidence 999944
No 34
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=1e-46 Score=330.46 Aligned_cols=198 Identities=26% Similarity=0.441 Sum_probs=167.0
Q ss_pred ccccCCceecC-CCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHH----
Q 025707 5 KKLQVPRVKLG-TQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALK---- 79 (249)
Q Consensus 5 ~~~~m~~~~lg-~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~---- 79 (249)
.|.+++.+++| ++|.+||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+
T Consensus 8 ~~~~~~~~~~~~~tg~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~ 76 (334)
T 3krb_A 8 HMGTLEAQTQGPGSMQYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFK 76 (334)
T ss_dssp -------------CCSSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHH
T ss_pred cccceecCCcCCCCCCccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhh
Confidence 45667766666 4599999999999863 678999999999999999999999999 8999999998
Q ss_pred ----cCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC--------------C---
Q 025707 80 ----ELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------S--- 138 (249)
Q Consensus 80 ----~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~--- 138 (249)
..+|++++|+||++... .+++.+++++++||++||+||||+|++|+|+. .
T Consensus 77 ~~~~g~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~ 147 (334)
T 3krb_A 77 DASSGIKREDVWITSKLWNYN---------HRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRA 147 (334)
T ss_dssp CTTSSCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCB
T ss_pred hccCCCChhhEEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccc
Confidence 45899999999998543 67899999999999999999999999999943 1
Q ss_pred ----CCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCcEEecc
Q 025707 139 ----VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 139 ----~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~s 212 (249)
.+.+++|++|++|+++|+||+||||||++++++++++.. +++++|++||++.+. .+++++|+++||++++|+
T Consensus 148 ~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~ays 225 (334)
T 3krb_A 148 MLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTAYS 225 (334)
T ss_dssp CBCCCCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEES
T ss_pred cccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEEEe
Confidence 468999999999999999999999999999999998874 789999999999874 789999999999999999
Q ss_pred cCcccccCCCCC
Q 025707 213 PLGRGFFGGKAV 224 (249)
Q Consensus 213 pl~~G~l~g~~~ 224 (249)
||++|+|++++.
T Consensus 226 pL~~G~L~~~~~ 237 (334)
T 3krb_A 226 PMGGSYADPRDP 237 (334)
T ss_dssp TTCCSBC-----
T ss_pred cCCCCcccCCCC
Confidence 999999998853
No 35
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=2.1e-46 Score=326.19 Aligned_cols=187 Identities=24% Similarity=0.381 Sum_probs=169.7
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CC
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LP 82 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~ 82 (249)
+++++| ++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~ 69 (316)
T 3o3r_A 2 TTFVKL-RTKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVR 69 (316)
T ss_dssp CCEEEC-TTSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCC
T ss_pred CCeEEC-CCCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCC
Confidence 456777 8899999999999963 457899999999999999999999998 79999999985 58
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCC-------------------CCCCHHH
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD-------------------TSVPIEE 143 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~-------------------~~~~~~~ 143 (249)
|++++|+||++... .+++.+++++++||+|||+||||+|++|||+ ...++++
T Consensus 70 R~~v~I~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 3o3r_A 70 REDLFIVSKLWSTF---------FEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hHHcEEEeeeCCCc---------CCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHH
Confidence 99999999998643 5799999999999999999999999999996 3467899
Q ss_pred HHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc
Q 025707 144 TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 144 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
+|++|++|+++|+||+||||||+.++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|.
T Consensus 141 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~ 217 (316)
T 3o3r_A 141 AWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQ--EKLIQYCHSKGIAVIAYSPLGSPD 217 (316)
T ss_dssp HHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHTTTCEEEEECTTCCTT
T ss_pred HHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccch--HHHHHHHHHcCCEEEEecccCCCC
Confidence 9999999999999999999999999999998763 478999999998873 789999999999999999999994
No 36
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=2.5e-46 Score=325.76 Aligned_cols=188 Identities=26% Similarity=0.413 Sum_probs=171.1
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CC
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LP 82 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~ 82 (249)
+++++| ++|++||+||||||+ .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~--------~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~ 69 (316)
T 1us0_A 2 ASRILL-NNGAKMPILGLGTWK--------SPPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (316)
T ss_dssp CSEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CceEEC-CCCCEECCEeEECCc--------CCHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCC
Confidence 357888 899999999999986 2678999999999999999999999999 79999999986 48
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHHH
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEE 143 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~ 143 (249)
|++++|+||++... .+++.+++++++||++||+||||+|++|+|+. ..++++
T Consensus 70 R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 1us0_A 70 REELFIVSKLWCTY---------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hhHeEEEEeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHH
Confidence 99999999997542 67999999999999999999999999999963 236789
Q ss_pred HHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccccc
Q 025707 144 TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219 (249)
Q Consensus 144 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l 219 (249)
+|++|++|+++|+||+||||||++++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|.|
T Consensus 141 ~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l 218 (316)
T 1us0_A 141 TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEEecccccCcc
Confidence 9999999999999999999999999999998863 569999999999874 6899999999999999999999986
No 37
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-46 Score=329.46 Aligned_cols=217 Identities=25% Similarity=0.356 Sum_probs=183.2
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
.+|++++|+ +|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++
T Consensus 23 ~~m~~~~L~-tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~ 90 (335)
T 3h7u_A 23 NAITFFKLN-TGAKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFEDRV 90 (335)
T ss_dssp -CCCEEECT-TSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEcC-CCCEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhcCC
Confidence 369999995 899999999999963 678999999999999999999999999 89999999985
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC--------------CCCHHHHHH
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETIG 146 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~~~~~~~~~ 146 (249)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+.+++|+
T Consensus 91 ~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~ 161 (335)
T 3h7u_A 91 VKREDLFITSKLWCTD---------HDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWK 161 (335)
T ss_dssp CCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHHH
T ss_pred CCcceeEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHHH
Confidence 3899999999997543 67899999999999999999999999999964 246899999
Q ss_pred HHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc-cCCCC
Q 025707 147 EMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF-FGGKA 223 (249)
Q Consensus 147 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~-l~g~~ 223 (249)
+|++|+++|+||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|. ..++.
T Consensus 162 aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~~~~~~~ 239 (335)
T 3h7u_A 162 AMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPGTTWLKS 239 (335)
T ss_dssp HHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTTCTTSCC
T ss_pred HHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCCCCCCCc
Confidence 999999999999999999999999998876 4679999999999885 689999999999999999999763 22221
Q ss_pred CC------CCCCCCcccccCCCcceeeeee
Q 025707 224 VV------ESVPLDSFLVCFSSISVSFCFI 247 (249)
Q Consensus 224 ~~------~~~~~~~~~~~~~~~~~~~~~~ 247 (249)
.. ..++ ..+..+.++++++|++.
T Consensus 240 ~~~~~~~l~~iA-~~~g~t~aqvaL~w~l~ 268 (335)
T 3h7u_A 240 DVLKNPILNMVA-EKLGKSPAQVALRWGLQ 268 (335)
T ss_dssp CGGGCHHHHHHH-HHHTCCHHHHHHHHHHH
T ss_pred cccccHHHHHHH-HHHCcCHHHHHHHHHHH
Confidence 10 0011 12344556777777653
No 38
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=6.7e-46 Score=324.68 Aligned_cols=183 Identities=27% Similarity=0.420 Sum_probs=167.5
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------C
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~ 81 (249)
+|++++| ++|++||+||||||+ ++.++|+.|++.|||+||||+.|| +|+.+|++|++ .
T Consensus 24 ~m~~~~L-~tg~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~ 87 (331)
T 3h7r_A 24 PIRFFEL-NTGAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDGFV 87 (331)
T ss_dssp -CCEEEC-TTSCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEC-CCCCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhcCCC
Confidence 6999999 699999999999984 577999999999999999999999 89999999986 3
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC--------------CCCHHHHHHH
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETIGE 147 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~~~~~~~~~~ 147 (249)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+.+++|++
T Consensus 88 ~R~~v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~a 158 (331)
T 3h7r_A 88 KREELFITSKLWSND---------HLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKA 158 (331)
T ss_dssp CGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHHHHH
T ss_pred CchhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHHHHH
Confidence 899999999997543 67899999999999999999999999999964 3568999999
Q ss_pred HHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 148 MKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 148 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
|++|+++|+||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|
T Consensus 159 L~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~g 228 (331)
T 3h7r_A 159 MEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSGYSPLGSQ 228 (331)
T ss_dssp HHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCS
T ss_pred HHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEEeCCCCCC
Confidence 99999999999999999999999998876 4689999999999875 68999999999999999999986
No 39
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=1.1e-45 Score=322.79 Aligned_cols=216 Identities=29% Similarity=0.406 Sum_probs=183.9
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-------C
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-------L 81 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-------~ 81 (249)
.+++.| |||++||.||||||+ .+++++.++|+.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 2 ~~~v~L-ntG~~vp~iGlGtw~--------~~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~ 69 (324)
T 4gac_A 2 ASSVLL-HTGQKMPLIGLGTWK--------SEPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAV 69 (324)
T ss_dssp CCEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSB
T ss_pred CCeEEC-CCCCEeccceeECCC--------CCHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhccccee
Confidence 456767 999999999999986 3678999999999999999999999999 89999999986 4
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHH
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIE 142 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~ 142 (249)
.|+++++.+|.+... .+++.+++++++||+|||+||||+|++|+|+. ..+++
T Consensus 70 ~r~~~~~~~~~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (324)
T 4gac_A 70 PREELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYK 140 (324)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHH
T ss_pred cccccccccccCCCC---------CCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHH
Confidence 688999999987543 67899999999999999999999999999863 35689
Q ss_pred HHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccC
Q 025707 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (249)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~ 220 (249)
++|++|++|+++|+||+||+||+++++++++... ..+.++|+++|+.... .+++++|+++||++++|+||++|.++
T Consensus 141 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~gi~~~a~spL~~g~~~ 218 (324)
T 4gac_A 141 ETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQ--NELIAHCHARGLEVTAYSPLGSSDRA 218 (324)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCGGGG
T ss_pred HHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhH--HHHHHHHHHhceeeeecCCcccCccc
Confidence 9999999999999999999999999999998776 4568899999987763 78999999999999999999999999
Q ss_pred CCCCCCCC-CC--------CcccccCCCcceeeeee
Q 025707 221 GKAVVESV-PL--------DSFLVCFSSISVSFCFI 247 (249)
Q Consensus 221 g~~~~~~~-~~--------~~~~~~~~~~~~~~~~~ 247 (249)
++...... .+ ..+..+.++++++|++.
T Consensus 219 ~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~ 254 (324)
T 4gac_A 219 WRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQ 254 (324)
T ss_dssp GGSTTSCCGGGCHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cCCCCCcchhhHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 88543221 11 12334555677777653
No 40
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=4.4e-45 Score=320.74 Aligned_cols=213 Identities=28% Similarity=0.436 Sum_probs=177.9
Q ss_pred C-CceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHc-----C
Q 025707 9 V-PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-----L 81 (249)
Q Consensus 9 m-~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~-----~ 81 (249)
| ++++| ++|++||.||||||++ + +++.++|+.|++ .|||+||||+.|| +|+.+|++|+. .
T Consensus 36 m~~~~~L-~tg~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 102 (344)
T 2bgs_A 36 EQDHFVL-KSGHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEAGI 102 (344)
T ss_dssp -CCEEEC-TTSCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHTTC
T ss_pred CCceEEC-CCCCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhcCC
Confidence 6 47888 7899999999999862 4 789999999999 9999999999999 79999999986 4
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC---------------CCCHHHHHH
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------------SVPIEETIG 146 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~---------------~~~~~~~~~ 146 (249)
+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..+.+++|+
T Consensus 103 ~R~~v~I~TK~~~~---------~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~ 173 (344)
T 2bgs_A 103 DRKDLFVTSKIWCT---------NLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWK 173 (344)
T ss_dssp CGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHH
T ss_pred CcccEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHH
Confidence 89999999999753 267999999999999999999999999999963 236889999
Q ss_pred HHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc--cCCC
Q 025707 147 EMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF--FGGK 222 (249)
Q Consensus 147 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~--l~g~ 222 (249)
+|++|+++|+||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|- +...
T Consensus 174 aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a~spL~~G~~~~~~~ 251 (344)
T 2bgs_A 174 EMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITAYSPLGSSEKNLAHD 251 (344)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCTTTTCCTTC
T ss_pred HHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEEeCcccCCCchhhcc
Confidence 999999999999999999999999999876 4579999999998874 689999999999999999999981 1000
Q ss_pred CCCCCCCCCcccccCCCcceeeee
Q 025707 223 AVVESVPLDSFLVCFSSISVSFCF 246 (249)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~ 246 (249)
.....++ ..+..+.++++++|++
T Consensus 252 ~~l~~iA-~~~g~s~aqvaL~w~l 274 (344)
T 2bgs_A 252 PVVEKVA-NKLNKTPGQVLIKWAL 274 (344)
T ss_dssp HHHHHHH-HHHTCCHHHHHHHHHH
T ss_pred HHHHHHH-HHhCCCHHHHHHHHHH
Confidence 0000111 1233455677777765
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=97.83 E-value=6.2e-06 Score=79.18 Aligned_cols=99 Identities=12% Similarity=0.042 Sum_probs=75.8
Q ss_pred HHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE--EcCCCCH---H----------------HHHHH
Q 025707 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI--GLSEASP---D----------------TIRRA 173 (249)
Q Consensus 115 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i--Gvs~~~~---~----------------~l~~~ 173 (249)
++.+|.+|++|++|++ +|..+... .++++++++++..+|+|+.+ |+|++.. + ...++
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~~-~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVAG-VTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCHH-HHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceEE-EECCcCcc-HHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 5567888999999994 76554432 46889999999999999999 4444433 1 23444
Q ss_pred hhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcc-ccc
Q 025707 174 HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGR-GFF 219 (249)
Q Consensus 174 ~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~-G~l 219 (249)
+....+++++++||-..+ .+++.|.+.|++|++.+|.++ |.+
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTCC
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCCC
Confidence 556789999999987653 588999999999999999986 554
No 42
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=94.28 E-value=1.7 Score=37.24 Aligned_cols=154 Identities=8% Similarity=0.040 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.-++-+....+-+++++.-.+++-|.-+... .++++...+-++. |
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-l 212 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQ----------SLDVPAAIKRSQA-L 212 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHHH-H
Confidence 4566777888888999999986321111011222223444312234445444321 2456655554444 7
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.++++++. .|-.. +-++.+.++++.-.|--++- +.++++.++++++....+++|+..+-.-. ....++
T Consensus 213 ~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i 283 (359)
T 1mdl_A 213 QQEGVTWIE-----EPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRA 283 (359)
T ss_dssp HHHTCSCEE-----CCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHH
T ss_pred HHhCCCeEE-----CCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHH
Confidence 888887653 34222 34777788887766655544 44678899999988889999998766532 122789
Q ss_pred HHHHHHhCCcEEeccc
Q 025707 198 VPLCRELGIGIVPYCP 213 (249)
Q Consensus 198 ~~~~~~~gi~v~a~sp 213 (249)
.+.|+++|+.++..+.
T Consensus 284 ~~~A~~~g~~~~~~~~ 299 (359)
T 1mdl_A 284 SALAQQFGIPMSSHLF 299 (359)
T ss_dssp HHHHHHTTCCBCCBSC
T ss_pred HHHHHHcCCeEeeccH
Confidence 9999999999887753
No 43
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=93.82 E-value=2.3 Score=36.63 Aligned_cols=158 Identities=11% Similarity=0.070 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+.+ .|++.|..--.-++-......-+++++.-.+++-|.-.... .++.+...+-++ .
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~-~ 210 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQ----------GWDEQTASIWIP-R 210 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEECTT----------CCCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHH-H
Confidence 46777788888898 99999985322111011222333444311223444444321 245665554443 6
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.++++++ ..|-.. +.++.+.+++++-.|.-+ |=+.++.+.++++++....+++|+..+-.-. ....+
T Consensus 211 l~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (370)
T 1nu5_A 211 LEEAGVELV-----EQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLK 281 (370)
T ss_dssp HHHHTCCEE-----ECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCcceE-----eCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHH
Confidence 788887653 444322 236677777776555433 3355788999999998889999997655422 11277
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 282 VAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCcEEecCCcchH
Confidence 999999999999988765443
No 44
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=93.64 E-value=2.4 Score=36.89 Aligned_cols=156 Identities=17% Similarity=0.128 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-.+-+. ..+-+++++.-.+++-|.-+... .++.+...+-++ .|
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 231 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGPQAKIAADMHW----------NQTPERALELIA-EM 231 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCTTSEEEEECCS----------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 5677888888899999999985311101112 23333444412234444444321 245666555554 37
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.++++++. .|-.. +.++.+.++++.-.|--++- +-++++.++++++....+++|+..+- -.- ...++
T Consensus 232 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 301 (388)
T 2nql_A 232 QPFDPWFAE-----APVWT----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRI 301 (388)
T ss_dssp GGGCCSCEE-----CCSCT----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHH
T ss_pred hhcCCCEEE-----CCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHH
Confidence 888887653 34222 34777888887755555544 44688899999988889999997665 221 12678
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 302 ~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 302 GALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp HHHHHHHTCEECCCCCSSCS
T ss_pred HHHHHHcCCeEEeecCCCcH
Confidence 99999999999987554433
No 45
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=93.61 E-value=1.8 Score=37.94 Aligned_cols=155 Identities=9% Similarity=-0.030 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC----cCC--------C------chHHHHHHHHHcCCCCCeEEEecccccccCCcc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK----YGP--------Y------TNEILLGKALKELPRENIQVATKFGFVELGFTS 101 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~----Yg~--------g------~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~ 101 (249)
+.++..+....+.+.|++.|..-.. +|. . +....+-+++++.-.+++-|.-....
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~------- 224 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHA------- 224 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCC-------
Confidence 6778888888899999999985421 221 0 01112222333311234555544321
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCce
Q 025707 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPIT 180 (249)
Q Consensus 102 ~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~ 180 (249)
.++++...+-++. |+.++++++. .|-.. +.++.+.++++.-.|.-++- +-++++.++++++....+
T Consensus 225 ---~~~~~~a~~~~~~-l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d 291 (407)
T 2o56_A 225 ---FTDTTSAIQFGRM-IEELGIFYYE-----EPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLS 291 (407)
T ss_dssp ---CSCHHHHHHHHHH-HGGGCCSCEE-----CSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCS
T ss_pred ---CCCHHHHHHHHHH-HHhcCCCEEe-----CCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 2456666555554 7888876543 44322 23667777777655554443 445778899999888899
Q ss_pred EEeeecCccccc-hhhhHHHHHHHhCCcEEecccC
Q 025707 181 AVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 181 ~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl 214 (249)
++|+..+-+-.- ...++.+.|+++|+.++..+..
T Consensus 292 ~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 292 VIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp EECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 999987664321 1278999999999999987763
No 46
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=93.54 E-value=2.4 Score=36.58 Aligned_cols=154 Identities=11% Similarity=0.030 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+.+.|++.|..--.-++ ....+.+ +++++.-.+++-|.-+... .++++...+-++ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~ 213 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHLGDSFPLMVDANM----------KWTVDGAIRAAR-A 213 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CSCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH-H
Confidence 5677888888899999999985422111 0122233 4444411123333333321 245665555444 4
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.++++++ ..|-... -++.+.++++.-.|.-++ =+.++.+.++++++....+++|+..+-+-. ....+
T Consensus 214 l~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 214 LAPFDLHWI-----EEPTIPD----DLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp HGGGCCSEE-----ECCSCTT----CHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHH
T ss_pred HHhcCCCEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHH
Confidence 777777654 4443322 366667776654454443 345688999999988889999998766432 12278
Q ss_pred HHHHHHHhCCcEEecccC
Q 025707 197 IVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl 214 (249)
+.+.|+++|+.++..+.+
T Consensus 285 i~~~A~~~gi~~~~h~~~ 302 (371)
T 2ovl_A 285 VAALAEANNMLLTSHGVH 302 (371)
T ss_dssp HHHHHHHTTCCEEECSCH
T ss_pred HHHHHHHcCCeEccccHH
Confidence 999999999999987653
No 47
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=93.48 E-value=1.7 Score=37.03 Aligned_cols=157 Identities=10% Similarity=0.040 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-......+.+ +++++. .+++-|.-.. +. .++++...+-+ +.|
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~-g~~~~l~vDa--n~--------~~~~~~a~~~~-~~l 205 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV-TRGAKYIVDA--NM--------GYTQKEAVEFA-RAV 205 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH-STTCEEEEEC--TT--------CSCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh-CCCCeEEEEC--CC--------CCCHHHHHHHH-HHH
Confidence 46777788888899999998753211100122333 555544 3455443222 11 24566655544 447
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.++++ ..++..|-.. +-++.+.+++++-.|.-.+ =+-++.+.++++++....+++|+..+- -.- ....+
T Consensus 206 ~~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 277 (345)
T 2zad_A 206 YQKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAI 277 (345)
T ss_dssp HHTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHH
T ss_pred HhcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHH
Confidence 788776 1134455332 2366677777765554443 355788999999988888999996554 221 12679
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 278 ~~~A~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 278 VEIAESSGLKLMIGCMGESS 297 (345)
T ss_dssp HHHHHTTTCEEEECCSSCCH
T ss_pred HHHHHHcCCeEEEecCcccH
Confidence 99999999999998776443
No 48
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=93.44 E-value=2.2 Score=36.87 Aligned_cols=157 Identities=11% Similarity=0.059 Sum_probs=97.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++.|++.|-.--.-.+-..+...-+++++ .+.-++.|=... .++++... +.
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~------------~~~~~~A~----~~ 206 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNC------------GYDVERAL----AF 206 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTT------------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCC------------CCCHHHHH----HH
Confidence 57888888889999999998654322111123333345554 433233322111 24454433 23
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
+++|..+..++.++..|-...+ ++.+.+++++-.| -..|=+.++...+.+++....++++|+..+. -.- ...+
T Consensus 207 ~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~ 281 (365)
T 3ik4_A 207 CAACKAESIPMVLFEQPLPRED----WAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLK 281 (365)
T ss_dssp HHHHHHTTCCEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHH
T ss_pred HHHHhhCCCCceEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHH
Confidence 3344112347888888755443 5666677665444 3556677899999999888889999997665 321 1277
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 282 MIAIAQAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCcccH
Confidence 899999999999988776543
No 49
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=93.43 E-value=3.6 Score=35.73 Aligned_cols=157 Identities=9% Similarity=0.062 Sum_probs=97.4
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+++. |++.|..--.-.+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~A~~-~~~~ 216 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINA----------RWDRRTALH-YLPI 216 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 567777777888887 9999976432211123333445666533445555555421 244544432 3456
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++++|+ .|-... -++.+.+++++-.| -..|=+-++.+.++++++...++++|+..+-.-. ....+
T Consensus 217 l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 287 (383)
T 3i4k_A 217 LAEAGVELFE-----QPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKK 287 (383)
T ss_dssp HHHTTCCEEE-----SCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHH
T ss_pred HHhcCCCEEE-----CCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHH
Confidence 7778776554 443322 25556666665333 3345566889999999988889999998766532 12277
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+..
T Consensus 288 ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 288 IAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp HHHHHHHTTCEEEECCSCCC
T ss_pred HHHHHHHcCCeEEeCCCCcc
Confidence 99999999999987665543
No 50
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=93.31 E-value=1.3 Score=38.77 Aligned_cols=158 Identities=8% Similarity=0.006 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEE-ecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVA-TKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~-tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+++.|++.|..--... ...+...-+++++.-.+++-|. -... . .++++...+ +-+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~-~~~d~~~v~avR~a~g~~~~l~~vDan--~--------~~~~~~A~~-~~~~ 209 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKN-LDADEEFLSRVKEEFGSRVRIKSYDFS--H--------LLNWKDAHR-AIKR 209 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHHGGGCEEEEEECT--T--------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCC-HHHHHHHHHHHHHHcCCCCcEEEecCC--C--------CcCHHHHHH-HHHH
Confidence 567788888899999999997643221 1122233345544212344443 3321 1 244544332 2334
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
|+.+++ ++.++..|-... .++.+.++++.-.|.- |=+.++.+.++++++...++++|+..+-.-. ....++
T Consensus 210 l~~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 210 LTKYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HTTCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhcCC---CcceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 555554 225555654332 3667778887766665 8899999999999988889999997655432 112789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 282 a~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 282 AYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHcCCEEEecCCCccH
Confidence 99999999999987655443
No 51
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=93.31 E-value=1.5 Score=38.02 Aligned_cols=152 Identities=11% Similarity=-0.020 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-. -+....+-+++++.-.+++-|.-+... .++++...+-+ +.|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~-~~l 212 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGAD-WQSDIDRIRACLPLLEPGEKAMADANQ----------GWRVDNAIRLA-RAT 212 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHGGGSCTTCEEEEECTT----------CSCHHHHHHHH-HHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCC-HHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH-HHH
Confidence 456677788888999999998532110 012222334444422345555554321 24555443333 224
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++ ++..|-. .++.+.++++.-.|--++- +-++++.++++++....+++|+..+-.-. ....++
T Consensus 213 ~~~~i------~iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 213 RDLDY------ILEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp TTSCC------EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHH
T ss_pred HhCCe------EEeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 44443 4444422 5778888887755554443 44688899999988889999998776532 222789
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 281 ~~~A~~~g~~~~~~~~~e 298 (379)
T 2rdx_A 281 RDFLIDNRMPVVAEDSWG 298 (379)
T ss_dssp HHHHHHTTCCEEEECSBC
T ss_pred HHHHHHcCCeEEEeeccC
Confidence 999999999999886443
No 52
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.17 E-value=3.9 Score=35.41 Aligned_cols=156 Identities=11% Similarity=0.068 Sum_probs=97.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.- +-+....+-+++++.-. ++-|.-+.. ..++.+...+-+ +.|
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g-d~~l~vD~n----------~~~~~~~a~~~~-~~l 213 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGR-GEKLDLEITAAVRGEIG-DARLRLDAN----------EGWSVHDAINMC-RKL 213 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHTTST-TCEEEEECT----------TCCCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCC-CHHHHHHHHHHHHHHcC-CcEEEEecC----------CCCCHHHHHHHH-HHH
Confidence 56777888888999999999863211 10112223345554222 555544432 124566554433 467
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+|++++. .|-.. +.++.+.++++.-.|--++- +-++++.++++++....+++|+..+-+-. ....++
T Consensus 214 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 284 (384)
T 2pgw_A 214 EKYDIEFIE-----QPTVS----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKA 284 (384)
T ss_dssp GGGCCSEEE-----CCSCT----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEEe-----CCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHH
Confidence 788877654 44322 24677777777655655544 34678999999988889999997655422 222779
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 285 ~~~A~~~g~~~~~~~~~es~ 304 (384)
T 2pgw_A 285 AAVAEAAGLKICIHSSFTTG 304 (384)
T ss_dssp HHHHHHTTCCEEECCCSCCH
T ss_pred HHHHHHCCCeEeeccCcCCH
Confidence 99999999999988754443
No 53
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=92.93 E-value=2.9 Score=36.30 Aligned_cols=156 Identities=8% Similarity=0.056 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--...+-..+...-+++++.- +++-|.-.... .++++...+ +-+.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~-~~~~l~vDan~----------~~~~~~A~~-~~~~L 215 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF-PEFRVRVDYNQ----------GLEIDEAVP-RVLDV 215 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTT----------CCCGGGHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC-CCCeEEEECCC----------CCCHHHHHH-HHHHH
Confidence 4566667778888899999975432211112333344555533 55555554322 234443332 33456
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++++|+ .|-... -++.+.+++++-.|. ..|=+.++...+.++++...++++|+..+-.-. ....++
T Consensus 216 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 286 (385)
T 3i6e_A 216 AQFQPDFIE-----QPVRAH----HFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTV 286 (385)
T ss_dssp HTTCCSCEE-----CCSCTT----CHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEEE-----CCCCcc----cHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 677766554 443322 366777887764443 445577889999999988888999997655322 112779
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+..
T Consensus 287 ~~~A~~~gi~~~~~~~~es 305 (385)
T 3i6e_A 287 ARIAAAHGLMAYGGDMFEA 305 (385)
T ss_dssp HHHHHHTTCEEEECCCSCC
T ss_pred HHHHHHcCCEEEeCCCCcc
Confidence 9999999999987665443
No 54
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=92.67 E-value=2.8 Score=36.51 Aligned_cols=153 Identities=7% Similarity=-0.020 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc-hHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT-NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~-se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+....+.+.|++.|..--.-++-+ ..+.+ +++++.-.+++-|.-... ..++++...+-++.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~avg~d~~l~vDan----------~~~~~~~a~~~~~~- 229 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARV-TAVRKHLGDAVPLMVDAN----------QQWDRPTAQRMCRI- 229 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHH-HHHHHHHCTTSCEEEECT----------TCCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHcCCCCEEEEECC----------CCCCHHHHHHHHHH-
Confidence 577788888889999999987632111101 22333 455541122333333321 12466666555544
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.++++++. .|-.. +.++.+.++++.-.|--++- +.++++.++++++....+++|+..+-.-. ....+
T Consensus 230 l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 300 (393)
T 2og9_A 230 FEPFNLVWIE-----EPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLK 300 (393)
T ss_dssp HGGGCCSCEE-----CCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHH
T ss_pred HHhhCCCEEE-----CCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHH
Confidence 7888887654 34222 23667777777655544433 45688999999988889999997655322 11278
Q ss_pred HHHHHHHhCCcEEeccc
Q 025707 197 IVPLCRELGIGIVPYCP 213 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~sp 213 (249)
+.+.|+++|+.++..+.
T Consensus 301 i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 301 IASLAEHAGLMLAPHFA 317 (393)
T ss_dssp HHHHHHHTTCEECCCSC
T ss_pred HHHHHHHcCCEEeccCc
Confidence 99999999999986654
No 55
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=92.51 E-value=2.9 Score=36.48 Aligned_cols=157 Identities=13% Similarity=0.021 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++.|++.|=.--.-.+-..+...-+++++ .+. +-|.--. +. .++++...+ .
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~~~--~~L~vDa--N~--------~w~~~~A~~----~ 207 (389)
T 3s5s_A 144 SPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAAPG--ASLILDG--NG--------GLTAGEALA----L 207 (389)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHCTT--CEEEEEC--TT--------CSCHHHHHH----H
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHhCCC--CeEEEEC--CC--------CCCHHHHHH----H
Confidence 45677788888899999998653222111123333345554 432 2222221 11 244444333 3
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
+++|..+.+++.++..|-...+ ++.+.++.+.-.| -..|=|.++...+.+++....++++|+..+. -.- ...+
T Consensus 208 ~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~ 282 (389)
T 3s5s_A 208 VAHARRLGADVALLEQPVPRDD----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEALD 282 (389)
T ss_dssp HHHHHHTTCEEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHH
T ss_pred HHHHhhCCCCeEEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHH
Confidence 3444213458899988865444 4556666655333 4567788999999999988889999997665 221 1267
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 283 i~~~A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 283 IAAVARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHHHHHTTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCcccH
Confidence 899999999999988776443
No 56
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=92.31 E-value=4.8 Score=34.53 Aligned_cols=156 Identities=8% Similarity=0.057 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.-++-......-+++++.-.+++-|.-.... .++.+...+-++. |
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-l 208 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQ----------GWRPKEAVTAIRK-M 208 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 4666777888888999999986321111011122223444311234445444321 2455555444443 6
Q ss_pred HH--cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 120 RR--LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 120 ~~--Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
+. ++ +.++..|-... .++.+.+++++-.|.-. |=+.++.+.+.++++....+++|+..+-.-. ....
T Consensus 209 ~~~~~~-----i~~iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~ 279 (366)
T 1tkk_A 209 EDAGLG-----IELVEQPVHKD----DLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAE 279 (366)
T ss_dssp HHTTCC-----EEEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHH
T ss_pred hhcCCC-----ceEEECCCCcc----cHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHH
Confidence 66 44 45566664322 36667777766444433 4456788999999988889999997655422 1127
Q ss_pred hHHHHHHHhCCcEEecccCc
Q 025707 196 EIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~ 215 (249)
++.+.|+++|+.++..+.+.
T Consensus 280 ~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 280 KINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp HHHHHHHHHTCCEEECCSSC
T ss_pred HHHHHHHHcCCcEEecCccc
Confidence 79999999999999877653
No 57
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=92.30 E-value=5.3 Score=34.75 Aligned_cols=156 Identities=8% Similarity=0.045 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--........+.+ +++++.-.+++-|.-... ..++++...+-++ .|
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~g~d~~l~vDan----------~~~~~~~a~~~~~-~l 212 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAVGDDVDLFIDIN----------GAWTYDQALTTIR-AL 212 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHHCTTSCEEEECT----------TCCCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhhCCCCEEEEECC----------CCCCHHHHHHHHH-HH
Confidence 56777788888889999998753211100122333 444441122333333321 1245665544443 67
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.++++++ ..|-.. +.++.+.+++++-.|--.+ =+.++.+.++++++....+++|+..+-.-.- ...++
T Consensus 213 ~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 283 (397)
T 2qde_A 213 EKYNLSKI-----EQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRW 283 (397)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 77887754 344322 2467777887765554443 3456888999999888899999976654221 12779
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+.+
T Consensus 284 ~~~A~~~g~~~~~~~~~es 302 (397)
T 2qde_A 284 LTLARLANLPVICGCMVGS 302 (397)
T ss_dssp HHHHHHHTCCEEECCCSCC
T ss_pred HHHHHHcCCeEEEecCccc
Confidence 9999999999998865443
No 58
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=92.29 E-value=3.3 Score=35.67 Aligned_cols=156 Identities=13% Similarity=0.111 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++. |++.|-.--.......+...-+++++.-.+++-|.-.... .++.+...+ +-+.
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~ 207 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNR----------GWSAAESLR-AMRE 207 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 577788888888998 9999876433221113333344555421233333333211 244443322 2344
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~ 196 (249)
|+.+++++ +..|-... .++.+.++++.-.|.- .|=+-++.+.++++++...++++|+..+-. .-. ..+
T Consensus 208 l~~~~i~~-----iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ 277 (367)
T 3dg3_A 208 MADLDLLF-----AEELCPAD----DVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGSTR 277 (367)
T ss_dssp TTTSCCSC-----EESCSCTT----SHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHH
T ss_pred HHHhCCCE-----EECCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHH
Confidence 55555544 44553332 3566777777655543 455668889999998888899999977655 321 277
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+.+
T Consensus 278 ia~~A~~~gi~~~~~~~~es 297 (367)
T 3dg3_A 278 VHHLAEGLGLDMVMGNQIDG 297 (367)
T ss_dssp HHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHcCCeEEECCcCCc
Confidence 99999999999997665443
No 59
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=92.23 E-value=5.3 Score=34.66 Aligned_cols=154 Identities=12% Similarity=0.092 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..-.....-+....+-+++++.-.+++-|.-+... .++++...+-++. |
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~-l 217 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAV----------PEDLDQTKSFLKE-V 217 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCC----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCC----------CCCHHHHHHHHHH-H
Confidence 5777888888899999999985422110011122223444311223434434321 2456655554444 7
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.++++++ ..|-.. +.++.+.++++.-.|--++- +-++++.++++++....+++|+..+-.-.- ...++
T Consensus 218 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 288 (391)
T 2qgy_A 218 SSFNPYWI-----EEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEI 288 (391)
T ss_dssp GGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHH
T ss_pred HhcCCCeE-----eCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHH
Confidence 77887654 344322 34677777877655554433 456789999999888899999977664321 12789
Q ss_pred HHHHHHhCCcEEeccc
Q 025707 198 VPLCRELGIGIVPYCP 213 (249)
Q Consensus 198 ~~~~~~~gi~v~a~sp 213 (249)
.+.|+++|+.++..+.
T Consensus 289 ~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 289 SNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHTTCEECCBCC
T ss_pred HHHHHHCCCEEeccCC
Confidence 9999999999998875
No 60
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=92.20 E-value=3 Score=35.95 Aligned_cols=157 Identities=10% Similarity=0.006 Sum_probs=98.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--... ...+...-+++++.-.+++-|.-.... .++.+...+ +-+.|
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~-~~~d~~~v~avR~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 207 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGS-KELDVERIRMIREAAGDSITLRIDANQ----------GWSVETAIE-TLTLL 207 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCC-HHHHHHHHHHHHHHhCCCCeEEEECCC----------CCChHHHHH-HHHHH
Confidence 567788888888999999987643221 123333344555422234434433211 244544433 34466
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++++|+ .|-.. +-++.+.+++++-.|. ..|=+-++...+.++++...++++|+..+-.-. ....++
T Consensus 208 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 278 (368)
T 3q45_A 208 EPYNIQHCE-----EPVSR----NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNI 278 (368)
T ss_dssp GGGCCSCEE-----CCBCG----GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCCh----hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHH
Confidence 777776664 33221 2356677777764443 334467889999999988889999998766532 122789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+.++
T Consensus 279 ~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 279 IRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp HHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHcCCcEEecCccccH
Confidence 99999999999987766443
No 61
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=91.93 E-value=3.9 Score=35.67 Aligned_cols=151 Identities=11% Similarity=0.002 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc---hHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~---se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|.-... ..++++...+-++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~d~e~v-~avR~avG~d~~l~vDan----------~~~~~~~ai~~~~ 241 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKV--GQPNCAEDIRRL-TAVREALGDEFPLMVDAN----------QQWDRETAIRMGR 241 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--CCSCHHHHHHHH-HHHHHHHCSSSCEEEECT----------TCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEec--CCCCHHHHHHHH-HHHHHHcCCCCeEEEECC----------CCCCHHHHHHHHH
Confidence 577788888889999999987632 2111 22333 445441122333333321 1245666555555
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcCCceEEeeecCcccc-chh
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~ 194 (249)
. |+.++++++ ..|-.. +.++.+.+++++-.|--++ =+.++.+.++++++....+++|+..+-.-. ...
T Consensus 242 ~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~ 311 (398)
T 2pp0_A 242 K-MEQFNLIWI-----EEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPF 311 (398)
T ss_dssp H-HGGGTCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred H-HHHcCCcee-----eCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 4 788887654 344322 2366777777765554443 345688999999988888999997654322 112
Q ss_pred hhHHHHHHHhCCcEEeccc
Q 025707 195 NEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~sp 213 (249)
.++.+.|+++|+.++..+.
T Consensus 312 ~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 312 LKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp HHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHcCCeEeecCc
Confidence 7899999999999986654
No 62
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=91.80 E-value=5.6 Score=34.02 Aligned_cols=154 Identities=11% Similarity=0.050 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|..--.-.. ..+...-+++++.-.+++-|.-.... .++++... +.+
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~-~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 203 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGI-EADIARVKAIREAVGFDIKLRLDANQ----------AWTPKDAV----KAI 203 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHH----HHH
Confidence 5677888888889999999986532211 12333344555422234444444321 23444332 233
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
++|. ..++.++..|-...+ ++.+.+++++-.|. ..|=+-++.+.++++++....+++|+..+-.-. ....++
T Consensus 204 ~~L~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 204 QALA--DYQIELVEQPVKRRD----LEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp HHTT--TSCEEEEECCSCTTC----HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHH--hcCCCEEECCCChhh----HHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 4442 345667776654333 56677777664443 334567888999999988889999997655422 112789
Q ss_pred HHHHHHhCCcEEecccC
Q 025707 198 VPLCRELGIGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (249)
.+.|+++|+.++..+.+
T Consensus 278 ~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 278 NQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHHTTCEEEECCCT
T ss_pred HHHHHHcCCeEEecCCC
Confidence 99999999999988877
No 63
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=91.75 E-value=5.5 Score=34.64 Aligned_cols=156 Identities=8% Similarity=0.006 Sum_probs=94.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCC----cCC--------Cc---h---HHHHHHHHHcCCCCCeEEEecccccccCCc
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADK----YGP--------YT---N---EILLGKALKELPRENIQVATKFGFVELGFT 100 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~----Yg~--------g~---s---e~~lg~~l~~~~r~~~~I~tK~~~~~~~~~ 100 (249)
.+.++..+....+.+.|++.|..-.. +|. .. . ....-+++++.-.+++-|.-....
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~------ 218 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHG------ 218 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCC------
Confidence 46788888888899999999985421 221 00 0 112222333311234555544321
Q ss_pred ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCc
Q 025707 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPI 179 (249)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~ 179 (249)
.++++...+-++. |+.+++ .++..|-.. +.++.+.+++++-.|.-++- +-++.+.++++++....
T Consensus 219 ----~~~~~~ai~~~~~-l~~~~i-----~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 284 (403)
T 2ox4_A 219 ----HTDLVSAIQFAKA-IEEFNI-----FFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSI 284 (403)
T ss_dssp ----CSCHHHHHHHHHH-HGGGCE-----EEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHH-HHhhCC-----CEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 2455555444443 565544 455555332 23677778887755655544 34567889999888888
Q ss_pred eEEeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 180 TAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 180 ~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
+++|+..+-.-. ....++.+.|+++|+.++..+..
T Consensus 285 d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 285 DVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp SEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 999997665422 11278999999999999987763
No 64
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=91.67 E-value=3.4 Score=36.16 Aligned_cols=150 Identities=9% Similarity=-0.058 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-C-CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-L-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~-~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
.++..+.++.+++.|++.|..-- +.....+.+ +++++ . +.-.+.+ .... .++.+. . .+-+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~v-~avR~a~G~~~~L~v--DaN~----------~w~~~~-~-~~~~~ 226 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEPL-QETRRAVGDHFPLWT--DANS----------SFELDQ-W-ETFKA 226 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHHH-HHHHHHHCTTSCEEE--ECTT----------CCCGGG-H-HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHHH-HHHHHhcCCCCEEEE--eCCC----------CCCHHH-H-HHHHH
Confidence 78888888999999999987543 222233333 44554 2 3334444 3211 234554 3 33456
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++++|. .|-... .++.+.++++.-.|. ..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 227 l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 297 (400)
T 3mwc_A 227 MDAAKCLFHE-----QPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIK 297 (400)
T ss_dssp HGGGCCSCEE-----SCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEEe-----CCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHH
Confidence 7777776654 443322 356677777764443 445577889999999988889999997655422 11278
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+..
T Consensus 298 ia~~A~~~gi~~~~~~~~es 317 (400)
T 3mwc_A 298 IYKIATDNGIKLWGGTMPES 317 (400)
T ss_dssp HHHHHHHTTCEEEECCSCCC
T ss_pred HHHHHHHcCCEEEecCCCCC
Confidence 99999999999988765543
No 65
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=91.42 E-value=3.7 Score=35.56 Aligned_cols=153 Identities=9% Similarity=0.019 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|..--.-. -..+...-+++++.-.+++-|.-+... .++++...+ +-+.|
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~-~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~l 212 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGD-VERDIARIRDVEDIREPGEIVLYDVNR----------GWTRQQALR-VMRAT 212 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHTTSCCTTCEEEEECTT----------CCCHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCC-HHHHHHHHHHHHHHcCCCceEEEECCC----------CCCHHHHHH-HHHHh
Confidence 677888888899999999998643221 012233334555433345555555422 244544332 22334
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++ ++..|-. .++.+.+++++-.|.- .|=+-++.+.++++++...++++|+..+-.-. ....++
T Consensus 213 ~~~~i------~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 213 EDLHV------MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp GGGTC------CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred ccCCe------EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 55543 4445432 4677788877755543 34466888999999988889999997655422 122789
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+..
T Consensus 281 a~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 281 RDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp HHHHHHTTCEEEEECSSCS
T ss_pred HHHHHHcCCEEEcCCCCCC
Confidence 9999999999986655433
No 66
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=91.42 E-value=5.7 Score=34.20 Aligned_cols=150 Identities=14% Similarity=0.119 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..-- +.....+.+ +++++.- +++-|.-.... .++.+. .+-++ .|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~~~~-~l 211 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPV-RATREAF-PDIRLTVDANS----------AYTLAD-AGRLR-QL 211 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HHHHH-TT
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHH-HHHHHHc-CCCeEEEeCCC----------CCCHHH-HHHHH-HH
Confidence 567777888888999999987532 222334444 5555422 45444444311 244555 33333 36
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.+++++|+ .|-.. +.++.+.+++++-.|. ..|=+-++.+.++++++....+++|+..+-.-.- ...++
T Consensus 212 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (375)
T 1r0m_A 212 DEYDLTYIE-----QPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRV 282 (375)
T ss_dssp GGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHH
T ss_pred HhCCCcEEE-----CCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHH
Confidence 777776654 44322 2355666776654443 3344567889999999888899999977664321 12789
Q ss_pred HHHHHHhCCcEEecccC
Q 025707 198 VPLCRELGIGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (249)
.+.|+++|+.++..+-+
T Consensus 283 ~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 283 HDVAQSFGAPVWCGGML 299 (375)
T ss_dssp HHHHHHTTCCEEECCCC
T ss_pred HHHHHHcCCcEEecCcc
Confidence 99999999996554443
No 67
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=91.27 E-value=6.8 Score=33.94 Aligned_cols=159 Identities=13% Similarity=0.093 Sum_probs=97.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--... ...+...-+++++.-.+++-|.-.... .++++...+ +-+.|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~-~~~d~~~v~avR~a~g~~~~L~vDaN~----------~w~~~~A~~-~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGAD-FNRDIQLLKALDNEFSKNIKFRFDANQ----------GWNLAQTKQ-FIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHCCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCC-HHHHHHHHHHHHHhcCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 567788888888999999997643321 112333344555522233333333211 244443332 22233
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+..+ .++.++..|-...+ ++.+.++++.-.| -..|=+-++...+.++++....+++|+..+-.-. ....++
T Consensus 210 ~~~~---~~l~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~i 282 (379)
T 3r0u_A 210 NKYS---LNVEIIEQPVKYYD----IKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKI 282 (379)
T ss_dssp HTSC---CCEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcC---CCcEEEECCCCccc----HHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHH
Confidence 3311 46677777755433 5666677665333 3556677899999999988888999997655432 112779
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 283 a~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 283 KKLADSAGISCMVGCMMESP 302 (379)
T ss_dssp HHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHcCCEEEEeCCCccH
Confidence 99999999999988776443
No 68
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=91.16 E-value=4.3 Score=35.27 Aligned_cols=155 Identities=12% Similarity=-0.071 Sum_probs=97.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCc----CCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKY----GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Y----g~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
+.++..+.++.+.+.|++.|-.--.. ++-..+...-+++++.-.+++-|.-.... .++++. .
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~----------~~~~~~----A 210 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANN----------GLTVEH----A 210 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTT----------CCCHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHH----H
Confidence 57888888889999999999754321 11012223334555432345555554322 234433 3
Q ss_pred HHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-ch
Q 025707 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DI 193 (249)
Q Consensus 116 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~ 193 (249)
.+.+++|. +.+++ ++..|-. .++.+.+++++-.|. ..|=+.++...+.++++...++++|+..+..-. ..
T Consensus 211 ~~~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 211 LRMLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHH
Confidence 34455663 34566 7766643 356777787764443 445577889999999988889999997665432 11
Q ss_pred hhhHHHHHHHhCCcEEecccCcc
Q 025707 194 ENEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 194 ~~~~~~~~~~~gi~v~a~spl~~ 216 (249)
..++.+.|+++|+.++..+.+..
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCC
T ss_pred HHHHHHHHHHcCCEEEeCCCCCC
Confidence 27799999999999986654443
No 69
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=90.95 E-value=7.5 Score=33.86 Aligned_cols=155 Identities=10% Similarity=0.020 Sum_probs=94.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCC----cCC------------Cch-------HHHHHHHHHcCCCCCeEEEeccccc
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADK----YGP------------YTN-------EILLGKALKELPRENIQVATKFGFV 95 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~----Yg~------------g~s-------e~~lg~~l~~~~r~~~~I~tK~~~~ 95 (249)
.+.++..+....+.+.|++.|..-.. +|. |.. ...+-+++++.-.+++-|.-....
T Consensus 149 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~- 227 (410)
T 2gl5_A 149 VTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHS- 227 (410)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTT-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCC-
Confidence 36788888888999999999985421 121 011 112222333311234444444321
Q ss_pred ccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHh
Q 025707 96 ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAH 174 (249)
Q Consensus 96 ~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~ 174 (249)
.++++...+-++. |+.++ +.++..|-... .++.+.+++++-.|--++- +.++.+.+++++
T Consensus 228 ---------~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 288 (410)
T 2gl5_A 228 ---------LLGTNSAIQFAKA-IEKYR-----IFLYEEPIHPL----NSDNMQKVSRSTTIPIATGERSYTRWGYRELL 288 (410)
T ss_dssp ---------CSCHHHHHHHHHH-HGGGC-----EEEEECSSCSS----CHHHHHHHHHHCSSCEEECTTCCTTHHHHHHH
T ss_pred ---------CCCHHHHHHHHHH-HHhcC-----CCeEECCCChh----hHHHHHHHHhhCCCCEEecCCcCCHHHHHHHH
Confidence 2455555444433 56554 44566664332 3667777777655554443 446778999999
Q ss_pred hcCCceEEeeecCccccc-hhhhHHHHHHHhCCcEEeccc
Q 025707 175 AVHPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 175 ~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~sp 213 (249)
+....+++|+..+-.-.- ...++.+.|+++|+.++..+.
T Consensus 289 ~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 289 EKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 888899999987654321 127899999999999998766
No 70
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=90.90 E-value=5.4 Score=34.23 Aligned_cols=155 Identities=12% Similarity=0.086 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHH-HHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR-SCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~-~~~~~s 118 (249)
+.++..+..+.+.+.|++.|..--.-. -.....+-+++++.-.+++-|.-+... .++.+... +-++ .
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-~ 208 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTN-VKEDVKRIEAVRERVGNDIAIRVDVNQ----------GWKNSANTLTALR-S 208 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTT----------TTBSHHHHHHHHH-T
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCC-HHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 466777888888999999998532111 011122233444311234444433311 23444443 3333 3
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
|+.++++++ ..|-.. +-++.+.++++.-.|--++- +-++++.++++++....+++|+..+-.-.- ...+
T Consensus 209 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 279 (369)
T 2p8b_A 209 LGHLNIDWI-----EQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVK 279 (369)
T ss_dssp STTSCCSCE-----ECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcEE-----ECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHH
Confidence 555666544 444322 24677788887655544433 457888999999888899999976554221 1277
Q ss_pred HHHHHHHhCCcEEecccCc
Q 025707 197 IVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~ 215 (249)
+.+.|+++|+.++..+.+.
T Consensus 280 i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 280 LAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp HHHHHHHTTCEEEECCSSC
T ss_pred HHHHHHHcCCcEEecCCCc
Confidence 9999999999998876653
No 71
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=90.79 E-value=7.7 Score=34.17 Aligned_cols=149 Identities=8% Similarity=0.044 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
++..+....+.+.|++.|..--.-......+.+ +++++.-.+++-|.-... ..++.+...+-++. |+.
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~avG~d~~l~vDan----------~~~~~~eai~~~~~-L~~ 254 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVLGDEVDILTDAN----------TAYTMADARRVLPV-LAE 254 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECT----------TCCCHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhcCCCCEEEEECC----------CCCCHHHHHHHHHH-HHh
Confidence 666777788889999998753211101122333 344442123444443321 12456666555544 888
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCC-eeEE-EcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhHH
Q 025707 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIV 198 (249)
Q Consensus 122 Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~ 198 (249)
++++++. .|-.. +.++.+.+++++-. |--+ +=+.++.+.++++++....+++|+..+-.-.- ...++.
T Consensus 255 ~~i~~iE-----qP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia 325 (428)
T 3bjs_A 255 IQAGWLE-----EPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIA 325 (428)
T ss_dssp TTCSCEE-----CCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHH
T ss_pred cCCCEEE-----CCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHH
Confidence 8887653 44222 23677777776543 4333 33557889999999888899999987664321 127899
Q ss_pred HHHHHhCCcEEec
Q 025707 199 PLCRELGIGIVPY 211 (249)
Q Consensus 199 ~~~~~~gi~v~a~ 211 (249)
+.|+++|+.++..
T Consensus 326 ~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 326 AMASAYRIPINAH 338 (428)
T ss_dssp HHHHHTTCCBCCB
T ss_pred HHHHHcCCeEEec
Confidence 9999999998877
No 72
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=90.73 E-value=6.8 Score=33.99 Aligned_cols=156 Identities=13% Similarity=0.063 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++. |++.|-.--...+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~~~ 235 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQ----------SLDPAEATR-RIAR 235 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 678888889999999 9999875432211122333344555422234444433321 244544333 3345
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++++ +..|-...+ ++.+.+++++-.|. ..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 236 l~~~~i~~-----iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ 306 (383)
T 3toy_A 236 LADYDLTW-----IEEPVPQEN----LSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLN 306 (383)
T ss_dssp HGGGCCSE-----EECCSCTTC----HHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHH
T ss_pred HHhhCCCE-----EECCCCcch----HHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 56666544 445543333 55667777664443 445567888899999888889999997665432 11278
Q ss_pred HHHHHHHhCCcEEecccCc
Q 025707 197 IVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~ 215 (249)
+.+.|+++|+.+...+.+.
T Consensus 307 ia~~A~~~gi~~~~h~~~~ 325 (383)
T 3toy_A 307 VAGQADAASIPMSSHILPE 325 (383)
T ss_dssp HHHHHHHHTCCBCCCSCHH
T ss_pred HHHHHHHcCCEEeecCHHH
Confidence 9999999999998776543
No 73
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=90.66 E-value=3.3 Score=35.62 Aligned_cols=154 Identities=16% Similarity=0.002 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--. ++-+....+-+++++.-.+++-|.-+... .++.+... +.+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 210 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAALANQQPDEFFIVDANG----------KLSVETAL----RLL 210 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHHTTTCCTTCEEEEECTT----------BCCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHHHHhcCCCCEEEEECCC----------CcCHHHHH----HHH
Confidence 5677778888889999999875321 11011222233444422345555554321 23444332 334
Q ss_pred HHc-CCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 120 RRL-DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 120 ~~L-g~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
++| . ..++ ++..|-. .++.+.++++.-.|.-++- +-++++.++++++....+++|+..+-.-. ....+
T Consensus 211 ~~l~~--~~~i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (371)
T 2ps2_A 211 RLLPH--GLDF-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRR 281 (371)
T ss_dssp HHSCT--TCCC-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHH
T ss_pred HHHHh--hcCC-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHH
Confidence 444 2 1244 5555532 4677888887655554443 44688899999988889999997665422 11267
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 282 QRDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp HHHHHHHHTCEEEEECSSCCH
T ss_pred HHHHHHHcCCeEEecCCCcCH
Confidence 899999999999987765443
No 74
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=90.53 E-value=5.9 Score=34.61 Aligned_cols=154 Identities=13% Similarity=0.075 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC--CcCC-------Cc--------hHHHHHHHHHcCCCCCeEEEecccccccCCccc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTAD--KYGP-------YT--------NEILLGKALKELPRENIQVATKFGFVELGFTSV 102 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~--~Yg~-------g~--------se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~ 102 (249)
+.++..+....+.+.|++.|..-. .||. +. ..+.+ +++++.-.+++-|.-....
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v-~avRea~G~d~~l~vDan~-------- 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARV-AAVREAVGPEVEVAIDMHG-------- 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHH-HHHHHhcCCCCEEEEECCC--------
Confidence 467777888888999999987432 2332 11 11222 3334311234444444321
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceE
Q 025707 103 IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITA 181 (249)
Q Consensus 103 ~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~ 181 (249)
.++++...+-++. |+.+++++ +..|-.. +-++.+.+++++-.|--++- +.++.+.++++++....++
T Consensus 220 --~~~~~~a~~~~~~-l~~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 287 (410)
T 2qq6_A 220 --RFDIPSSIRFARA-MEPFGLLW-----LEEPTPP----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDY 287 (410)
T ss_dssp --CCCHHHHHHHHHH-HGGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred --CCCHHHHHHHHHH-HhhcCCCe-----EECCCCh----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 2456665554443 77777654 4455332 23677778877655544433 4568899999998888999
Q ss_pred EeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 182 VQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 182 ~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
+|+..+-.-. ....++.+.|+++|+.++..+..
T Consensus 288 v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 288 VMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp ECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 9997655322 11267899999999999887663
No 75
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=90.52 E-value=5.9 Score=34.42 Aligned_cols=151 Identities=13% Similarity=0.041 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--. .+...+.+ +++++.- .++-|.--... .++++.... + +.|
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~--~~~d~~~v-~avR~~~-~~~~l~vDaN~----------~~~~~~A~~-~-~~l 212 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIA--PGRDRAAI-KAVRLRY-PDLAIAADANG----------SYRPEDAPV-L-RQL 212 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECB--TTBSHHHH-HHHHHHC-TTSEEEEECTT----------CCCGGGHHH-H-HHG
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeC--cHHHHHHH-HHHHHHC-CCCeEEEECCC----------CCChHHHHH-H-HHH
Confidence 4788888999999999999854321 12333444 4454422 33444333211 234444332 3 334
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+ ++.++..|-...+ ++.+.++.+.-.| -..|=+.++...+.++++...++++|+..+-.-. ....++
T Consensus 213 ~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i 283 (388)
T 3qld_A 213 DAY-----DLQFIEQPLPEDD----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRA 283 (388)
T ss_dssp GGG-----CCSCEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhC-----CCcEEECCCCccc----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHH
Confidence 443 5566777655444 4556666665333 3557778899999999988888999997655432 112789
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 284 a~~A~~~gi~~~~~~~~e 301 (388)
T 3qld_A 284 LDVAGEAGMAAWVGGMYE 301 (388)
T ss_dssp HHHHHHTTCEEEECCCCC
T ss_pred HHHHHHCCCeEEecCccc
Confidence 999999999998776543
No 76
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=90.39 E-value=3.5 Score=36.07 Aligned_cols=151 Identities=11% Similarity=0.140 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 41 ~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
.++..+.++.+++. |++.|-.--... ...+...-+++++.- +++-|.-.... .++++...+ +-+.|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~-~~~d~~~v~avR~~~-~~~~l~vDaN~----------~w~~~~A~~-~~~~l 235 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTD-CAGDVAILRAVREAL-PGVNLRVDPNA----------AWSVPDSVR-AGIAL 235 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSC-HHHHHHHHHHHHHHC-TTSEEEEECTT----------CSCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCC-HHHHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHHHHHH-HHHHH
Confidence 57788888889998 999997544321 122233334555522 55444443221 245544433 33455
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++.+ +..|-. -++.+.+++++-.| -..|=+.++...+.++++...++++|+..+-.-. ....++
T Consensus 236 ~~~~i~~-----iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~i 304 (398)
T 4dye_A 236 EELDLEY-----LEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKAL 304 (398)
T ss_dssp GGGCCSE-----EECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcCCCE-----EcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHH
Confidence 6666544 444422 57778888776444 3445567888899999988889999997655432 112779
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 305 a~~A~~~gi~~~~h~~~e 322 (398)
T 4dye_A 305 AAHCETFGLGMNLHSGGE 322 (398)
T ss_dssp HHHHHHHTCEEEECCSCC
T ss_pred HHHHHHcCCeEEEcCCcc
Confidence 999999999999887553
No 77
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=90.22 E-value=5.4 Score=34.42 Aligned_cols=152 Identities=10% Similarity=-0.023 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-++-+....+-+++++.-.+++-|.-+... .++++. ..+.+
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~----a~~~~ 210 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAGLPDGHRVTFDVNR----------AWTPAI----AVEVL 210 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHSCCTTCEEEEECTT----------CCCHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHH----HHHHH
Confidence 5677778888888999999986321111012222334455433335555555321 234432 33445
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
++|. .++ ++..|-. .++.+.+++++-.|--++- +-++++.++++++....+++|+..+-.-. ....++
T Consensus 211 ~~l~---~~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i 280 (378)
T 2qdd_A 211 NSVR---ARD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQI 280 (378)
T ss_dssp TSCC---CCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhC---CCc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHH
Confidence 5553 456 6655532 5778888887755554433 45678899999988889999997665422 112679
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 281 ~~~A~~~g~~~~~~~~~e 298 (378)
T 2qdd_A 281 RDFGVSVGWQMHIEDVGG 298 (378)
T ss_dssp HHHHHHHTCEEEECCSSC
T ss_pred HHHHHHcCCeEEecCCCC
Confidence 999999999999886543
No 78
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=90.12 E-value=4.8 Score=34.56 Aligned_cols=150 Identities=15% Similarity=0.107 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..-- +.....+.+ +++++.- +++-|.-.... .++.+. .+ +-+.|
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~-~~~~l 204 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVL-KAVREAF-PEATLTADANS----------AYSLAN-LA-QLKRL 204 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HH-HHHGG
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHH-HHHHHHc-CCCeEEEecCC----------CCCHHH-HH-HHHHH
Confidence 567777888888999999987532 222334444 5555422 34333333211 234555 33 33347
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++++|+ .|-.. +.++.+.+++++-.|. ..|=+-++...++++++....+++|+..+-.-. ....++
T Consensus 205 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 275 (369)
T 2zc8_A 205 DELRLDYIE-----QPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRV 275 (369)
T ss_dssp GGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCcEEE-----CCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHH
Confidence 777766655 44322 2355666776654443 334456788999999988888999997655322 112789
Q ss_pred HHHHHHhCCcEEecccC
Q 025707 198 VPLCRELGIGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (249)
.+.|+++|+.++..+-+
T Consensus 276 ~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 276 HALAESAGIPLWMGGML 292 (369)
T ss_dssp HHHHHHTTCCEEECCCC
T ss_pred HHHHHHcCCcEEecCcc
Confidence 99999999996555444
No 79
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=90.11 E-value=8.9 Score=33.36 Aligned_cols=153 Identities=11% Similarity=0.074 Sum_probs=93.5
Q ss_pred CHHHHHHHH-HHHHHcCCCeEeCCCCcC------CCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHH
Q 025707 40 SEEDGISII-KHAFSKGITFFDTADKYG------PYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR 112 (249)
Q Consensus 40 ~~~~~~~~l-~~A~~~Gi~~~Dta~~Yg------~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~ 112 (249)
+.++..+.+ +.+++.|++.|-.--... +-..+...-+++++.-.+++-|.-.... .++++...
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~ 208 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANN----------GYSVGGAI 208 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTT----------CCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 567777777 888999999997643210 0012223334555421223333333221 24555443
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (249)
+ +-+.|+.+++++|. .|-... .++.+.+++++-.|. ..|=+-++...++++++.. ++++|+..+-.-.
T Consensus 209 ~-~~~~L~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~GG 277 (393)
T 4dwd_A 209 R-VGRALEDLGYSWFE-----EPVQHY----HVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKMGG 277 (393)
T ss_dssp H-HHHHHHHTTCSEEE-----CCSCTT----CHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTTTH
T ss_pred H-HHHHHHhhCCCEEE-----CCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCccccCC
Confidence 3 33466778776554 443322 356677777764443 3344668889999998888 9999998766532
Q ss_pred -chhhhHHHHHHHhCCcEEeccc
Q 025707 192 -DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 192 -~~~~~~~~~~~~~gi~v~a~sp 213 (249)
....++.+.|+++|+.+...+.
T Consensus 278 it~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 278 ITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHHHHHHcCCEEeecCC
Confidence 1127899999999999997776
No 80
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=89.97 E-value=8.7 Score=33.06 Aligned_cols=153 Identities=14% Similarity=0.058 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+++. |++.|-.--.-.+...+...-+++++.-.+++-|.-.... .++.+... +.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~----~~ 216 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNG----------KWDLPTCQ----RF 216 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTT----------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCC----------CCCHHHHH----HH
Confidence 577788888899999 9999976432111122333445555522234444444321 24444432 23
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
++.|. ..++.++..|-...+ ++.+.+++++-.|. ..|=+-++...+.++++...++++|+..+-.-. ....+
T Consensus 217 ~~~l~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 290 (372)
T 3tj4_A 217 CAAAK--DLDIYWFEEPLWYDD----VTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQ 290 (372)
T ss_dssp HHHTT--TSCEEEEESCSCTTC----HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred HHHHh--hcCCCEEECCCCchh----HHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 33442 346677777654333 56667777654443 445577889999999988889999998665432 11278
Q ss_pred HHHHHHHhCCcEEecc
Q 025707 197 IVPLCRELGIGIVPYC 212 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~s 212 (249)
+.+.|+++|+.++..+
T Consensus 291 ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 291 VADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHHTTCCBCCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 9999999999998765
No 81
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=89.97 E-value=3.4 Score=35.79 Aligned_cols=156 Identities=10% Similarity=0.052 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--.-.+-..+...-+++++.-.+++-|.-.... .++.+...+ +-+.|
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~A~~-~~~~l 214 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQ----------ALTPFGAMK-ILRDV 214 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CCCTTTHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 4566667778888899999976432211012333334555421233334333321 123333222 34566
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++++|+ .|-... -++.+.+++++-.|. ..|=+-++...+.++++...++++|+..+-.-. ....++
T Consensus 215 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 285 (377)
T 3my9_A 215 DAFRPTFIE-----QPVPRR----HLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSL 285 (377)
T ss_dssp HTTCCSCEE-----CCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCCcc----CHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 677776654 443322 356677777654443 445567888999999988889999997655422 112778
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 286 ~~~a~~~gi~~~~~~~~e 303 (377)
T 3my9_A 286 MAIADTAGLPGYGGTLWE 303 (377)
T ss_dssp HHHHHHHTCCEECCEECC
T ss_pred HHHHHHcCCeEecCCCCC
Confidence 999999999997655443
No 82
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=89.74 E-value=9.5 Score=33.14 Aligned_cols=151 Identities=11% Similarity=0.048 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCC--CCcCCC--chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCC--CHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTA--DKYGPY--TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKG--TPEYVRS 113 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta--~~Yg~g--~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~--s~~~i~~ 113 (249)
+.++..+....+.+.|++.|..- + .|.. +....+-+++++.-.+++-|.-+... .+ +.+...+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~sp-vG~~~~~~~~e~v~avr~a~G~d~~l~vDan~----------~~~~~~~~a~~ 213 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGP-IGRGTVAADADQIMAAREGLGPDGDLMVDVGQ----------IFGEDVEAAAA 213 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTT-TTSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTTTCHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCC-CCCCHHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCCHHHHHH
Confidence 57778888888999999999853 2 2311 11222233333311234445444321 24 5665554
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH-cCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE-EGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~-~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (249)
-++. |+.++++++ ..|-.. +.++.+.++++ .-.|.-++- +.++.+.++++++....+++|+..+-.-.
T Consensus 214 ~~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 283 (401)
T 2hzg_A 214 RLPT-LDAAGVLWL-----EEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGG 283 (401)
T ss_dssp THHH-HHHTTCSEE-----ECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTS
T ss_pred HHHH-HHhcCCCEE-----ECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCC
Confidence 4444 778887654 444322 34777788887 555544443 44678899999988889999997665422
Q ss_pred -chhhhHHHHHHHhCCcEEec
Q 025707 192 -DIENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 192 -~~~~~~~~~~~~~gi~v~a~ 211 (249)
....++.+.|+++|+.++..
T Consensus 284 it~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 284 LGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEecC
Confidence 11267999999999999876
No 83
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=89.63 E-value=4.2 Score=35.45 Aligned_cols=157 Identities=12% Similarity=0.033 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC--------CchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP--------YTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEY 110 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--------g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~ 110 (249)
+.++..+.++.+++.|++.|=.--...+ -..+...-+++++ .+ ++-|.--. +. .++++.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~--d~~L~vDa--N~--------~w~~~~ 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAP--TARLILDG--NC--------GYTAPD 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHST--TSEEEEEC--CS--------CCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCC--CCeEEEEc--cC--------CCCHHH
Confidence 4567778888889999999865432221 0112223334444 43 23332221 11 244443
Q ss_pred HHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcc
Q 025707 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189 (249)
Q Consensus 111 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~ 189 (249)
. .+.+++|.-+.+++.++..|-...+ ++.+.++.++-.| -+.|=+.++...+.+++....++++|+..+.
T Consensus 233 A----~~~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~- 303 (393)
T 3u9i_A 233 A----LRLLDMLGVHGIVPALFEQPVAKDD----EEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK- 303 (393)
T ss_dssp H----HHHHHTTTTTTCCCSEEECCSCTTC----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-
T ss_pred H----HHHHHHHhhCCCCeEEEECCCCCCc----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-
Confidence 3 2344566323457788888755433 3456666665333 3567788999999999988889999998665
Q ss_pred ccc-hhhhHHHHHHHhCCcEEecccCccc
Q 025707 190 ARD-IENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 190 ~~~-~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
-.- ...++.+.|+++|+.++..+.+..+
T Consensus 304 GGit~~~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 304 CGIVEALDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred cCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 321 1277899999999999988776443
No 84
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=89.52 E-value=9.7 Score=32.94 Aligned_cols=154 Identities=10% Similarity=0.072 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC------------cCCCchHH------HHHHHHHcCCCCCeEEEecccccccCCcc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK------------YGPYTNEI------LLGKALKELPRENIQVATKFGFVELGFTS 101 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~------------Yg~g~se~------~lg~~l~~~~r~~~~I~tK~~~~~~~~~~ 101 (249)
+.++..+....+.+.|++.|..-.. || |..+. .+-+++++.-.+++-|.-....
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~g-g~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~------- 208 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRR-SMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG------- 208 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTT-BCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccC-CcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC-------
Confidence 6777888888899999999874322 22 11111 1222333311234444444321
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCce
Q 025707 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPIT 180 (249)
Q Consensus 102 ~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~ 180 (249)
.++++...+-++. |+.++ +.++..|-... .++.+.+++++-.|.-++- +-++++.++++++....+
T Consensus 209 ---~~~~~~a~~~~~~-l~~~~-----i~~iE~P~~~~----~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d 275 (392)
T 2poz_A 209 ---GLTTDETIRFCRK-IGELD-----ICFVEEPCDPF----DNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACG 275 (392)
T ss_dssp ---CSCHHHHHHHHHH-HGGGC-----EEEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCS
T ss_pred ---CCCHHHHHHHHHH-HHhcC-----CCEEECCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 2455554444443 55554 44566654332 3667777777655554444 345678899999888899
Q ss_pred EEeeecCccccc-hhhhHHHHHHHhCCcEEecccC
Q 025707 181 AVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 181 ~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl 214 (249)
++|+..+-.-.- ...++.+.|+++|+.++..+.+
T Consensus 276 ~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 276 IIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp EECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 999977654321 1278999999999999987765
No 85
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=89.15 E-value=8 Score=34.14 Aligned_cols=151 Identities=11% Similarity=0.107 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.-......+.+ +++++.-.+++-|.-... ..++.+...+-++. |
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~a~G~d~~l~vDan----------~~~~~~~a~~~~~~-l 265 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRC-RLARAAIGPDIAMAVDAN----------QRWDVGPAIDWMRQ-L 265 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHCSSSEEEEECT----------TCCCHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHH-HHHHHhcCCCCeEEEECC----------CCCCHHHHHHHHHH-H
Confidence 67778888889999999998753211000122222 444441123344433321 12456655444444 6
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
+.++++++ ..|-.. +.++.+.++++. +.| -..|=+.+++..++++++....+++|+..+-.-.- ....
T Consensus 266 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ 336 (441)
T 2hxt_A 266 AEFDIAWI-----EEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLA 336 (441)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHH
T ss_pred HhcCCCee-----eCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHH
Confidence 77776654 444332 235666677665 223 34455678889999999888899999987664321 1267
Q ss_pred HHHHHHHhCCcEEec
Q 025707 197 IVPLCRELGIGIVPY 211 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~ 211 (249)
+...|+++|+.+...
T Consensus 337 ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 337 ILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHTTCEECCC
T ss_pred HHHHHHHcCCeEEEe
Confidence 999999999998643
No 86
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=88.85 E-value=11 Score=32.72 Aligned_cols=155 Identities=11% Similarity=0.030 Sum_probs=97.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++.|++.|..--.-.+-..+...-+++++ ...+++-|.-.... .++++. ..+.
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vDaN~----------~w~~~~----A~~~ 229 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNR----------SLPSRD----ALRL 229 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEECTT----------CCCHHH----HHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC----------CCCHHH----HHHH
Confidence 57888888899999999998754321110122233344443 22144444444321 234433 3344
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
+++|. ..++ ++..|-+ .++.+.++++.-.|. ..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 230 ~~~L~--~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ 300 (391)
T 4e8g_A 230 SRECP--EIPF-VLEQPCN------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAA 300 (391)
T ss_dssp HHHCT--TSCE-EEESCSS------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHH
T ss_pred HHHHh--hcCe-EEecCCc------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 55664 3377 7777721 366777887764443 456677899999999988889999997655432 11277
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 301 ia~~A~~~gi~~~~~~~~es~ 321 (391)
T 4e8g_A 301 FRDICEARALPHSCDDAWGGD 321 (391)
T ss_dssp HHHHHHHTTCCEEEECSSCSH
T ss_pred HHHHHHHcCCeEEeCCcCCCH
Confidence 999999999999887665443
No 87
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=88.54 E-value=5.9 Score=33.92 Aligned_cols=157 Identities=10% Similarity=0.035 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+++.|++.|..--... ...+...-+++++.-.+++-|.-.... .++++...+ +-+.|
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~-~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~~-~~~~l 207 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGD-EEQDFERLRRLHETLAGRAVVRVDPNQ----------SYDRDGLLR-LDRLV 207 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHHHHHTTSSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCC-HHHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHHHHH-HHHHH
Confidence 577788888899999999998643221 112333334555421234444444321 244554433 34567
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcC-CceEEeeecCcccc-chhhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVH-PITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~-~~~~~q~~~n~~~~-~~~~~ 196 (249)
+.+++++|. .|-... .++.+.+++++-.|. ..|=+-++...+.++++.. .++++|+..+-.-. ....+
T Consensus 208 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 278 (356)
T 3ro6_B 208 QELGIEFIE-----QPFPAG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARR 278 (356)
T ss_dssp HHTTCCCEE-----CCSCTT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHH
T ss_pred HhcCCCEEE-----CCCCCC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHH
Confidence 778877664 443322 245555555542332 4455678889999999887 89999997655422 11278
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 279 i~~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 279 IATIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp HHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHcCCEEEecCCcccH
Confidence 999999999999987766443
No 88
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=88.49 E-value=12 Score=32.51 Aligned_cols=152 Identities=8% Similarity=-0.021 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|..--.-. -......-+++++.-.+++-|.-+... .++.+...+ +-+.|
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~-~~~d~~~v~avR~a~g~d~~l~vDan~----------~~~~~~A~~-~~~~l 218 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRA-PRKDAANLRAMRQRVGADVEILVDANQ----------SLGRHDALA-MLRIL 218 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCC-HHHHHHHHHHHHHHcCCCceEEEECCC----------CcCHHHHHH-HHHHH
Confidence 678888889999999999998643211 112233334555422234444444321 245554433 33466
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHH-HcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLV-EEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~-~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
+.+++++| ..|-... -++.+.+++ +.-.|.-. |=+-++.+.++++++...++++|+..+-.-. ....+
T Consensus 219 ~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 219 DEAGCYWF-----EEPLSID----DIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp HHTTCSEE-----ESCSCTT----CHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred HhcCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 77877655 4443322 366677887 65555433 3355778889999988889999998766532 12278
Q ss_pred HHHHHHHhCCcEEecc
Q 025707 197 IVPLCRELGIGIVPYC 212 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~s 212 (249)
+.+.|+++|+.++..+
T Consensus 290 ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 290 ISASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHHHTTCEECCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 9999999999998775
No 89
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=88.49 E-value=11 Score=32.71 Aligned_cols=152 Identities=12% Similarity=-0.025 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-++-+....+-+++++.-.+++-|.-.... .++.+...+-++. |
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-l 233 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANG----------RFNLETGIAYAKM-L 233 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECTT----------CCCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 5677888888889999999874321111012222233444311234444433311 2455555444443 6
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcC----CceEEeeecCccccc-h
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVH----PITAVQLEWSLWARD-I 193 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~-~ 193 (249)
+.+++++ +..|-.. +.++.+.+++++-.|.-.+ =+-++.+.++++++.. ..+++|+..+-.-.- .
T Consensus 234 ~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~ 304 (392)
T 1tzz_A 234 RDYPLFW-----YEEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCE 304 (392)
T ss_dssp TTSCCSE-----EECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHH
T ss_pred HHcCCCe-----ecCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHHH
Confidence 6666654 4454332 3467777887765554443 3457888999998887 789999977654321 1
Q ss_pred hhhHHHHHHHhCCc---EEec
Q 025707 194 ENEIVPLCRELGIG---IVPY 211 (249)
Q Consensus 194 ~~~~~~~~~~~gi~---v~a~ 211 (249)
..++.+.|+++|+. ++..
T Consensus 305 ~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 305 YQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHHHHHHCCCCCceEeec
Confidence 27899999999999 7776
No 90
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=88.23 E-value=11 Score=32.12 Aligned_cols=151 Identities=11% Similarity=0.001 Sum_probs=91.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..-- +.....+.+. ++++.-.+++-|.-.. +. .++.+. .+-+ +.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v~-avr~~~g~~~~l~vDa--n~--------~~~~~~-~~~~-~~l 205 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPVR-AVRERFGDDVLLQVDA--NT--------AYTLGD-APQL-ARL 205 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHHH-HHHHHHCTTSEEEEEC--TT--------CCCGGG-HHHH-HTT
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHHH-HHHHhcCCCceEEEec--cC--------CCCHHH-HHHH-HHH
Confidence 567777888888899999987532 2223344443 4443111233333222 11 245555 3333 337
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.+++++ +..|-.. +.++.+.+++++-.|.-. +=+-++.+.++++++....+++|+..+-.-.- ...++
T Consensus 206 ~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 276 (368)
T 1sjd_A 206 DPFGLLL-----IEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 276 (368)
T ss_dssp GGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred HhcCCCe-----EeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 7777664 4454322 236777778776444433 33557889999999888899999977664321 12789
Q ss_pred HHHHHHhCCcEEecccC
Q 025707 198 VPLCRELGIGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (249)
.+.|+++|+.++..+.+
T Consensus 277 ~~~A~~~g~~~~~~~~~ 293 (368)
T 1sjd_A 277 HDVCAAHGIPVWCGGMI 293 (368)
T ss_dssp HHHHHHTTCCEEECCCC
T ss_pred HHHHHHcCCcEEeCCcc
Confidence 99999999996555444
No 91
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=87.86 E-value=12 Score=32.09 Aligned_cols=153 Identities=11% Similarity=-0.002 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCC--CCc-CCC---chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTA--DKY-GPY---TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta--~~Y-g~g---~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
+.++..+..+.+.+.|++.|..- ..| +.. +....+-+++++.-.+++-|.-+... .++++...+
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~ 218 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFH----------WYSRTDALA 218 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCT----------TCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHH
Confidence 57778888888899999998742 211 100 11122224444311234444444321 245665554
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCC-HHHHHHHhhcCCceEEeeecCcccc
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEAS-PDTIRRAHAVHPITAVQLEWSLWAR 191 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~-~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (249)
-+ +.|+.++++++ ..|-.. +.++.+.++++.-.|--++- +-++ .+.++++++....+++|+..+-.-.
T Consensus 219 ~~-~~l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 288 (382)
T 1rvk_A 219 LG-RGLEKLGFDWI-----EEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGG 288 (382)
T ss_dssp HH-HHHHTTTCSEE-----ECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred HH-HHHHhcCCCEE-----eCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCC
Confidence 44 35777777644 444332 23667777777655544433 4567 8899999998889999997655422
Q ss_pred -chhhhHHHHHHHhCCcEEecc
Q 025707 192 -DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 192 -~~~~~~~~~~~~~gi~v~a~s 212 (249)
....++.+.|+++|+.++..+
T Consensus 289 it~~~~i~~~A~~~g~~~~~~~ 310 (382)
T 1rvk_A 289 ITPALKTMHLAEAFGMECEVHG 310 (382)
T ss_dssp HHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHHcCCeEeecC
Confidence 112789999999999999873
No 92
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=87.82 E-value=13 Score=32.40 Aligned_cols=151 Identities=13% Similarity=0.131 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC-----------chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-----------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTP 108 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g-----------~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~ 108 (249)
+.++..+.++.+.+.|++.|-. -|.. ......-+++++.-.+++-|.-.... .++.
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~----------~~~~ 191 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG----------RVSA 191 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS----------CBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCC----------CCCH
Confidence 6788888999999999999987 2211 01122334555433344444433211 2445
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCCHHHHHHHhhcCCceEEeeecC
Q 025707 109 EYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWS 187 (249)
Q Consensus 109 ~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n 187 (249)
+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|.- .|=+-++...++++++...++++|+..+
T Consensus 192 ~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~ 261 (405)
T 3rr1_A 192 PMAKV-LIKELEPYRPLFI-----EEPVLAE----QAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLS 261 (405)
T ss_dssp HHHHH-HHHHHGGGCCSCE-----ECSSCCS----STHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTT
T ss_pred HHHHH-HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChh
Confidence 54433 3345677776655 4453322 3566778887655543 3446688899999998888999999876
Q ss_pred cccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 188 LWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 188 ~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
-.-. ....++.+.|+++|+.+...+.
T Consensus 262 ~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 262 HAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp TTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred hcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 6432 1127899999999999988764
No 93
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=87.59 E-value=7.9 Score=33.44 Aligned_cols=151 Identities=9% Similarity=0.002 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
++..+....+.+.|++.|..--.-++-+.....-+++++.-.+++-|.-.... .++++...+-++ .|+.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~l~~ 209 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQ----------SYDAAAAFKWER-YFSE 209 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHTTHH-HHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHH-HHhh
Confidence 66777788888999999875321111011122223444311234444433321 245554433333 2444
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhHHH
Q 025707 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIVP 199 (249)
Q Consensus 122 Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~ 199 (249)
+ -++.++..|-... .++.+.+++++-.|.-. |=+.++.+.++++++....+++|+..+-.-.- ...++.+
T Consensus 210 ~----~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 281 (382)
T 2gdq_A 210 W----TNIGWLEEPLPFD----QPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQ 281 (382)
T ss_dssp C----SCEEEEECCSCSS----CHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred c----cCCeEEECCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHH
Confidence 4 0344566664332 36677778776555433 33557889999999888899999987664321 1278999
Q ss_pred HHHHhCCcEEec
Q 025707 200 LCRELGIGIVPY 211 (249)
Q Consensus 200 ~~~~~gi~v~a~ 211 (249)
.|+++|+.++..
T Consensus 282 ~A~~~g~~~~~~ 293 (382)
T 2gdq_A 282 LARYFGVRASAH 293 (382)
T ss_dssp HHHHHTCEECCC
T ss_pred HHHHcCCEEeec
Confidence 999999998877
No 94
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=87.53 E-value=10 Score=33.65 Aligned_cols=155 Identities=14% Similarity=0.167 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..+..+.+++. |++.|=.--...+...+...-+++++.- +++-|.--... .++++... +
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-~~~~L~vDaN~----------~w~~~~Ai----~ 254 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAF-PGVPLRLDPNA----------AWTVETSK----W 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHS-TTCCEEEECTT----------CBCHHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC-CCCcEeeeCCC----------CCCHHHHH----H
Confidence 4778888888888875 9999865432211112222334555422 33333322111 23443332 3
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.+++|. ++ +.++..|- + -++.+.++++.-.| -..|-+.++...+.++++...++++|+..+-+-. ....
T Consensus 255 ~~~~L~-~~--l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea~ 325 (445)
T 3va8_A 255 VAKELE-GI--VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQ 325 (445)
T ss_dssp HHHHTT-TT--CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHH
T ss_pred HHHHHh-hh--cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHHH
Confidence 445564 34 66777763 2 47777888776433 2556677888899999988889999997554321 1127
Q ss_pred hHHHHHHHhCCcEEecccCccc
Q 025707 196 EIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~~G 217 (249)
.+.+.|+++|+.+...+....|
T Consensus 326 kia~lA~~~gv~v~~h~~~e~~ 347 (445)
T 3va8_A 326 TLASICATWGLRLSMHSNSHLG 347 (445)
T ss_dssp HHHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHHcCCEEEEeCCcccH
Confidence 8999999999999988876443
No 95
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=87.28 E-value=14 Score=32.02 Aligned_cols=152 Identities=13% Similarity=0.050 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|-.-- |.....+.+ +++++.- +++-|.--... .++++.. +-+ +.|
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~-~~~~l~vDaN~----------~~~~~~a-~~~-~~l 224 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSF-PKLSLMADANS----------AYNREDF-LLL-KEL 224 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTC-TTSEEEEECTT----------CCCGGGH-HHH-HTT
T ss_pred CHHHHHHHHHHHHHHhhHhheecc--ChHHHHHHH-HHHHHHc-CCCEEEEECCC----------CCCHHHH-HHH-HHH
Confidence 467777788888899999985321 112234444 5666532 34544433221 2344444 322 334
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.+ ++.++..|-...+ ++.+.++.++-.| -..|=+.++...+.++++...++++|+..+-.-.- ...++
T Consensus 225 ~~~-----~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i 295 (393)
T 1wuf_A 225 DQY-----DLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKI 295 (393)
T ss_dssp GGG-----TCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHH
T ss_pred HhC-----CCeEEECCCCCcC----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHH
Confidence 444 5566767754433 4556677665443 24455678889999998888889999987664321 12789
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+..
T Consensus 296 a~~A~~~gi~~~~~~~~es 314 (393)
T 1wuf_A 296 AEYCALNEILVWCGGMLEA 314 (393)
T ss_dssp HHHHHHTTCEEEECCCCCC
T ss_pred HHHHHHcCCeEEecCCccc
Confidence 9999999999988776544
No 96
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=86.57 E-value=15 Score=32.15 Aligned_cols=153 Identities=13% Similarity=0.106 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC--C----chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP--Y----TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g----~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
+.++..+..+.+.+.|++.|..--..+. | +.....-+++++.-.+++-|.-.... .++++...+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~----------~~~~~~Ai~ 248 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYM----------GWNLDYAKR 248 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH
Confidence 6788888899999999999986543321 1 11222233444422234444444321 245554433
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR- 191 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~- 191 (249)
+-+.|+.+++++| ..|-... -++.+.+++++-.|. ..|=+.++...++++++...++++|+..+-.-.
T Consensus 249 -~~~~Le~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGi 318 (412)
T 3stp_A 249 -MLPKLAPYEPRWL-----EEPVIAD----DVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGI 318 (412)
T ss_dssp -HHHHHGGGCCSEE-----ECCSCTT----CHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred -HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCH
Confidence 3345677776554 4453322 366778888775554 334566889999999998889999997655422
Q ss_pred chhhhHHHHHHHhCCcEEecc
Q 025707 192 DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 192 ~~~~~~~~~~~~~gi~v~a~s 212 (249)
....++.+.|+++|+.++..+
T Consensus 319 t~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 319 TAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHHHHHHHHcCCEEEecc
Confidence 112778999999999998766
No 97
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=86.41 E-value=17 Score=32.15 Aligned_cols=152 Identities=8% Similarity=0.069 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+++.|++.|-.--.-. -..+...-+++++.-.+++-|.-.... .++++...+- -+.|
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~~-~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~~-~~~L 268 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGAD-LQDDMRRCQIIRDMIGPEKTLMMDANQ----------RWDVPEAVEW-MSKL 268 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCC-HHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHHH-HHhh
Confidence 678888899999999999997543211 012222234454422233334333221 2444443222 2234
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH----cCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE----EGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~----~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~ 194 (249)
+.+ ++.++..|-...++ +.+.++++ .+.=-..|=+.++...+.++++...++++|+..+-+-. ...
T Consensus 269 ~~~-----~~~~iEeP~~~~d~----~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~ 339 (441)
T 4a35_A 269 AKF-----KPLWIEEPTSPDDI----LGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 339 (441)
T ss_dssp GGG-----CCSEEECCSCTTCH----HHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHH
T ss_pred ccc-----CccEEeCCCCcccH----HHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHHH
Confidence 444 55677777554443 44445554 35545667788999999999988889999998766432 122
Q ss_pred hhHHHHHHHhCCcEEecc
Q 025707 195 NEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~s 212 (249)
.++.+.|+++|+.+...+
T Consensus 340 ~kia~lA~~~gv~v~~H~ 357 (441)
T 4a35_A 340 LSVLLMAKKFEIPVCPHA 357 (441)
T ss_dssp HHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHcCCEEEEeC
Confidence 779999999999987543
No 98
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=86.39 E-value=7.8 Score=33.22 Aligned_cols=158 Identities=9% Similarity=0.032 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|-.--...+...+...-+++++.-.+++.|.--... .++++...+-+ +.|
T Consensus 143 ~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~l 211 (370)
T 2chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASVYI-PEL 211 (370)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHTTTTSEEEEECTT----------CCCTHHHHHHH-HHH
T ss_pred hhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHhcCCCcEEEecCCC----------CCCHHHHHHHH-HHH
Confidence 5667777888888889998866544321112222233444422344444332211 23444433322 334
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.+ ++.++..|-...+ ++.+.+|+++-.|. ..|=+.++...+.++++...++++|+...-+-.- ...++
T Consensus 212 ~~~-----~~~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~i 282 (370)
T 2chr_A 212 EAL-----GVELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKI 282 (370)
T ss_dssp HTT-----TCCEEECCSCSSC----HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHH
T ss_pred Hhc-----CCceecCCCChhh----hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHH
Confidence 444 4567777755444 45677777765543 4566778999999999888889999876544221 12779
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+.++
T Consensus 283 a~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 283 AAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHcCCeEEeCCCcccH
Confidence 99999999999877766544
No 99
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=86.37 E-value=15 Score=31.62 Aligned_cols=157 Identities=9% Similarity=-0.029 Sum_probs=89.4
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+....+++ .|++.|-.--.-.+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~ 215 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEALGDRASIRVDVNQ----------AWDAATGAK-GCRE 215 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHHTCTTCEEEEECTT----------CBCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH-HHHH
Confidence 34554555566665 69999875432211012233334555522344444444321 234544433 2345
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++ .++..|-...+ ++.+.++++.-.| -..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 216 l~~~~i-----~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 286 (381)
T 3fcp_A 216 LAAMGV-----DLIEQPVSAHD----NAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLA 286 (381)
T ss_dssp HHHTTC-----SEEECCBCTTC----HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHH
T ss_pred HhhcCc-----cceeCCCCccc----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 566665 44555543333 5666777765333 3456677889999999988889999997655422 12377
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+..
T Consensus 287 ia~~A~~~gi~~~~~~~~es 306 (381)
T 3fcp_A 287 LARVAQAAGIGLYGGTMLEG 306 (381)
T ss_dssp HHHHHHHHTCEEEECCSCCC
T ss_pred HHHHHHHcCCceecCCCCcc
Confidence 99999999999987766543
No 100
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=86.01 E-value=5.1 Score=34.84 Aligned_cols=150 Identities=12% Similarity=0.035 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHcCCCeEeC--CCCcCCCch----HH--HHHHHHHc--CCCCCeEEEecccccccCCcccccCCCHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDT--ADKYGPYTN----EI--LLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dt--a~~Yg~g~s----e~--~lg~~l~~--~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i 111 (249)
++..+..+.+.+.|++.|-. +..|+.-.+ +. .+-+++++ .+.-.+.| -. + ..++++..
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~v--Da--n--------~~~~~~~a 217 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMI--DA--N--------NAYNLNLT 217 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEE--EC--T--------TCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEE--EC--C--------CCCCHHHH
Confidence 55667777888999998864 222221111 11 11223332 22223333 21 1 12455444
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-----CCeeEEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKIKYIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-----G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
.+- ++.|. ..++.++..|-. +.++.+.++++. -.|.-.+--.++++.++++++....+++|+..
T Consensus 218 i~~----~~~l~--~~~i~~iE~P~~-----~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik~ 286 (392)
T 3p3b_A 218 KEV----LAALS--DVNLYWLEEAFH-----EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYDI 286 (392)
T ss_dssp HHH----HHHTT--TSCEEEEECSSS-----CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCBT
T ss_pred HHH----HHHHH--hcCCCEEecCCc-----ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 333 33432 235556666643 235566666665 34433332255667888888888899999987
Q ss_pred Cccccch-hhhHHHHHHHhCCcEEecccCcc
Q 025707 187 SLWARDI-ENEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 187 n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~ 216 (249)
+-. .-. ..++.+.|+++|+.++.. .+..
T Consensus 287 ~~~-Git~~~~i~~~A~~~gi~~~~h-~~es 315 (392)
T 3p3b_A 287 IWP-GFTHWMELGEKLDAHGLRSAPH-CYGN 315 (392)
T ss_dssp TTB-CHHHHHHHHHHHHHTTCEECCB-CCSC
T ss_pred ccc-CHHHHHHHHHHHHHcCCEEEec-CCCC
Confidence 775 322 278999999999999886 4433
No 101
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=85.91 E-value=13 Score=32.58 Aligned_cols=106 Identities=14% Similarity=0.015 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc------CCeeEEEcCCCCHHHHHHHhhcCCc
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE------GKIKYIGLSEASPDTIRRAHAVHPI 179 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~------G~ir~iGvs~~~~~~l~~~~~~~~~ 179 (249)
++++...+-+ +.|+.++. .+++ ++..|-......+-++.+.+|.++ +.=-..|=+.++...+.++++...+
T Consensus 249 ~~~~~A~~~~-~~L~~~~~-~~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~ 325 (413)
T 1kko_A 249 MDPVRCAEYI-ASLEKEAQ-GLPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSC 325 (413)
T ss_dssp TCHHHHHHHH-HHTGGGGT-TSCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCC
T ss_pred CCHHHHHHHH-HHHHhccC-Ccce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCC
Confidence 4555443322 23444443 2565 777775433335667788888775 3333446677889999999988889
Q ss_pred eEEeeecCccccc-hhhhHHHHHHHhCCcEEecccC
Q 025707 180 TAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 180 ~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl 214 (249)
+++|+..+-+-.- ...++.+.|+++|+.++..+..
T Consensus 326 d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 326 HMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp SEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 9999987664331 1278999999999999998775
No 102
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=85.49 E-value=10 Score=32.72 Aligned_cols=153 Identities=14% Similarity=0.122 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCC-cC-CCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCC-HHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADK-YG-PYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT-PEYVRSCCEA 117 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~-Yg-~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s-~~~i~~~~~~ 117 (249)
.++..+..+.+.+.|++.|..--. +| +-......-+++++.-.+++-|.-.... .++ ++...+ +-+
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~d~~~A~~-~~~ 215 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLAS----------KWHTCGHSAM-MAK 215 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTCSHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HHH
Confidence 367778888899999999986432 21 1112223334555422234444444321 234 444332 334
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.|+.++++++ ..|-... .++.+.+++++-.|. ..|=+-++...++++++...++++|+..+-.-. ....
T Consensus 216 ~l~~~~i~~i-----EqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~ 286 (374)
T 3sjn_A 216 RLEEFNLNWI-----EEPVLAD----SLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMK 286 (374)
T ss_dssp HSGGGCCSEE-----ECSSCTT----CHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHH
T ss_pred HhhhcCceEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHH
Confidence 5566665544 4553322 356677787765444 334456778888988888788999998766532 1127
Q ss_pred hHHHHHHHhCCcEEeccc
Q 025707 196 EIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~sp 213 (249)
++.+.|+++|+.+...+.
T Consensus 287 ~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 287 KIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHHHTCEECCBCC
T ss_pred HHHHHHHHcCCEEEecCC
Confidence 899999999999998776
No 103
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=85.14 E-value=5.2 Score=34.83 Aligned_cols=151 Identities=11% Similarity=0.121 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
++..+..+.+.+.|++.|..--... ...+...-+++++.-.+++-|.-.... .++++...+ +-+.|+.
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~~-~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~L~~ 224 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGFD-DARDVRNALHVRELLGAATPLMADANQ----------GWDLPRARQ-MAQRLGP 224 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSSC-HHHHHHHHHHHHHHHCSSSCEEEECTT----------CCCHHHHHH-HHHHHGG
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-HHHHHHHHHHHHHhcCCCceEEEeCCC----------CCCHHHHHH-HHHHHHH
Confidence 5566777788889999997643321 122233334555421223323333211 244544333 3346667
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHHH
Q 025707 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVP 199 (249)
Q Consensus 122 Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~ 199 (249)
+++++|+ .|-...+ .++.+.+++++-.|. ..|=+-++...++++++...++++|+..+-.-. ....++.+
T Consensus 225 ~~i~~iE-----eP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~ 296 (392)
T 3ddm_A 225 AQLDWLE-----EPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVAR 296 (392)
T ss_dssp GCCSEEE-----CCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHH
T ss_pred hCCCEEE-----CCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHH
Confidence 7765553 4433222 156677777654443 445567889999999888889999997655422 11278999
Q ss_pred HHHHhCCcEEecc
Q 025707 200 LCRELGIGIVPYC 212 (249)
Q Consensus 200 ~~~~~gi~v~a~s 212 (249)
.|+++|+.++...
T Consensus 297 ~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 297 AVVAAGLRYCPHY 309 (392)
T ss_dssp HHHHTTCEECCEE
T ss_pred HHHHcCCEEEecC
Confidence 9999999997544
No 104
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=84.82 E-value=14 Score=32.67 Aligned_cols=154 Identities=12% Similarity=0.155 Sum_probs=93.9
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..+..+.+++. |++.|=.--...+...+...-+++++.- +++-|.--.. ..++++.. -+
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-~d~~L~vDaN----------~~w~~~~A----i~ 256 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAF-PDHPLRLDPN----------AAWTPQTS----VK 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHC-TTSCEEEECT----------TCSCHHHH----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhC-CCCcEEEECC----------CCCCHHHH----HH
Confidence 4778888888888875 9999865432211112222334555522 3333332211 12344333 23
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.+++|. ++ +.++..|-. -++.+.++++.-.| -..|-+.++...+.++++...++++|+..+-+-. ....
T Consensus 257 ~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea~ 327 (445)
T 3vdg_A 257 VAAGLE-GV--LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSR 327 (445)
T ss_dssp HHHHTT-TT--CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHHH
T ss_pred HHHHHh-hH--HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHHH
Confidence 445664 34 677777732 25667777765333 3556677888889888888888999997554332 1127
Q ss_pred hHHHHHHHhCCcEEecccCcc
Q 025707 196 EIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~~ 216 (249)
.+.+.|+++|+.+...+....
T Consensus 328 kia~lA~~~gv~v~~h~~~e~ 348 (445)
T 3vdg_A 328 LLAGICDTFGLGLSMHSNSHL 348 (445)
T ss_dssp HHHHHHHHHTCEEEECCCSCC
T ss_pred HHHHHHHHcCCEEEEeCCcch
Confidence 899999999999998877543
No 105
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=84.62 E-value=9.5 Score=33.13 Aligned_cols=157 Identities=10% Similarity=-0.022 Sum_probs=94.8
Q ss_pred CHHHHHHHHHHHHHc---CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK---GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~---Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
+.++..+.++.+++. |++.|-.--...+-..+...-+++++.-.+++-|.-.... .++++...+ +-
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~ 239 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQ----------GLDMAEAMH-RT 239 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HH
Confidence 567888888899999 9999875432211112333334555422234444433321 244544332 23
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chh
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~ 194 (249)
+.|+.+++ .++..|-...+ ++.+.++++.-.|. ..|=+.++...+.++++...++++|+..+-.-. ...
T Consensus 240 ~~l~~~~i-----~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~ 310 (390)
T 3ugv_A 240 RQIDDLGL-----EWIEEPVVYDN----FDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGW 310 (390)
T ss_dssp HHHTTSCC-----SEEECCSCTTC----HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHH
T ss_pred HHHHhhCC-----CEEECCCCccc----HHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 34455554 44455544333 55667777654443 445677889999999988889999997655422 112
Q ss_pred hhHHHHHHHhCCcEEecccCcc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~ 216 (249)
.++.+.|+++|+.+...+.+..
T Consensus 311 ~~i~~~A~~~gi~~~~h~~~~a 332 (390)
T 3ugv_A 311 MRAAGVAGAWGIPMSTHLYPEV 332 (390)
T ss_dssp HHHHHHHHHHTCCBCCBSCHHH
T ss_pred HHHHHHHHHcCCEEeecCHHHH
Confidence 6899999999999987766533
No 106
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=84.59 E-value=19 Score=31.07 Aligned_cols=157 Identities=10% Similarity=0.007 Sum_probs=90.7
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+-...+++ .|++.|-.--...+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~ 216 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKALGDSASVRVDVNQ----------AWDEAVALR-ACRI 216 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CBCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 34555555566666 69999975432211012223334454421233444433221 234444332 3345
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++.+ +..|-... -++.+.++++.-.| -..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 217 l~~~~i~~-----iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 287 (382)
T 3dgb_A 217 LGGNGIDL-----IEQPISRN----NRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLR 287 (382)
T ss_dssp HHTTTCCC-----EECCBCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HhhcCcCe-----eeCCCCcc----CHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 56666544 44553322 25666777765434 3456677889999999988888999997655422 11277
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+..
T Consensus 288 i~~~A~~~gi~~~~~~~~es 307 (382)
T 3dgb_A 288 TAAIAEAAGIGLYGGTMLEG 307 (382)
T ss_dssp HHHHHHHHTCEEEECCSCCC
T ss_pred HHHHHHHcCCeEeecCCCcc
Confidence 89999999999987776644
No 107
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=84.20 E-value=20 Score=31.14 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=93.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC--cCC--C--------chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCC
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK--YGP--Y--------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~--Yg~--g--------~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s 107 (249)
+.++..+..+.+++.|++.|..-.. |.. | ......-+++++.-.+++-|.-.... .++
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~ 220 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG----------QFT 220 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CcC
Confidence 5788888888999999999986432 110 0 01122233444322234444444321 244
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
.+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|.-. |=+-++.+.++++++...++++|+..
T Consensus 221 ~~~A~~-~~~~l~~~~i~~i-----EeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 221 VSGAKR-LARRLEAYDPLWF-----EEPIPPE----KPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred HHHHHH-HHHHHhhcCCcEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 544433 3345677776544 4453332 35667777776555433 44567788899998888899999987
Q ss_pred Ccccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 187 SLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 187 n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+-.-. ....++.+.|+++|+.+...+.
T Consensus 291 ~~~GGit~~~~ia~~A~~~gi~~~~h~~ 318 (404)
T 4e5t_A 291 GRVGGLLEAKKIAAMAECHSAQIAPHLY 318 (404)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCEECCCCS
T ss_pred cccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 66532 1227899999999999976653
No 108
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=83.99 E-value=20 Score=30.91 Aligned_cols=149 Identities=15% Similarity=0.031 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.-++-.....+-+++++.-.+++-|.-.... .++.+...+-++. |
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~----------~~~~~~a~~~~~~-l 213 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNE----------AWTSKEALTKLVA-I 213 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTT----------CBCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 5777888888899999999985321111012222334555422345555544321 2456655555544 7
Q ss_pred HH--cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC-CeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025707 120 RR--LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (249)
Q Consensus 120 ~~--Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~ 196 (249)
+. ++++ ++..|-.. +.++.+.++++.- .|--++--+.+.+.++++++....+++|+. .=+. ...+
T Consensus 214 ~~~g~~i~-----~iEqP~~~----~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik-GGit--~a~~ 281 (389)
T 2oz8_A 214 REAGHDLL-----WVEDPILR----HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH-GQVT--DVMR 281 (389)
T ss_dssp HHTTCCCS-----EEESCBCT----TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC-SCHH--HHHH
T ss_pred HhcCCCce-----EEeCCCCC----cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC-cCHH--HHHH
Confidence 77 5543 44555332 2466777888764 555444333388899999988889999997 1111 1278
Q ss_pred HHHHHHHhCCcEEec
Q 025707 197 IVPLCRELGIGIVPY 211 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~ 211 (249)
+.+.|+++|+.++..
T Consensus 282 i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 282 IGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHHHTCCEEEC
T ss_pred HHHHHHHcCCeEeec
Confidence 999999999999988
No 109
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=83.88 E-value=16 Score=32.29 Aligned_cols=154 Identities=17% Similarity=0.175 Sum_probs=93.9
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..+..+.+++. |++.|=.--...+...+...-+++++.- +++-|.--... .++++.. -+
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~-pd~~L~vDaN~----------~w~~~~A----i~ 251 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAF-PGLPLRLDPNA----------AWTVETS----IR 251 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHS-TTCCEEEECTT----------CSCHHHH----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC-CCCcEeccCCC----------CCCHHHH----HH
Confidence 4778888888888874 9999865432211112222234555422 33333322111 2344333 23
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.+++|. ++ +.++..|-. -++.+.++++.-.| -..|-|.++...+.++++...++++|+..+-+-. ....
T Consensus 252 ~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea~ 322 (441)
T 3vc5_A 252 VGRALD-GV--LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSA 322 (441)
T ss_dssp HHHHTT-TT--CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHHH
T ss_pred HHHHHH-HH--HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHHH
Confidence 455664 34 677777732 25677777765333 3556777888889888888888999997554321 1127
Q ss_pred hHHHHHHHhCCcEEecccCcc
Q 025707 196 EIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~~ 216 (249)
.+...|+++|+.+...+....
T Consensus 323 kia~lA~~~gv~v~~h~~~e~ 343 (441)
T 3vc5_A 323 HIATLCATFGIELSMHSNSHL 343 (441)
T ss_dssp HHHHHHHHTTCEEEECCCSCC
T ss_pred HHHHHHHHcCCEEEecCCccc
Confidence 899999999999998877543
No 110
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=82.35 E-value=23 Score=30.33 Aligned_cols=156 Identities=8% Similarity=0.040 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (249)
Q Consensus 42 ~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (249)
++..+-...+++ .|++.|-.--...+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.|+
T Consensus 144 ~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~~-~~~~l~ 212 (370)
T 1chr_A 144 KRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASV-YIPELE 212 (370)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHHSSTTCCEEEECTT----------CCCTTHHHH-HTHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHH-HHHHHH
Confidence 333333445555 89999875432211123333445666522233333333221 133333322 233445
Q ss_pred HcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHH
Q 025707 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIV 198 (249)
Q Consensus 121 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~ 198 (249)
.++ +.++..|-...+ ++.+.+++++-.|. ..|=+-++...+.++++...++++|+..+-.-. ....++.
T Consensus 213 ~~~-----i~~iEqP~~~~~----~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~ 283 (370)
T 1chr_A 213 ALG-----VELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIA 283 (370)
T ss_dssp TTT-----EEEEECCSCTTC----HHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHH
T ss_pred hcC-----CCEEECCCCccc----HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHH
Confidence 554 455666644333 56667777654443 345567889999999988889999998766532 1227899
Q ss_pred HHHHHhCCcEEecccCccc
Q 025707 199 PLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 199 ~~~~~~gi~v~a~spl~~G 217 (249)
+.|+++|+.++..+.+..|
T Consensus 284 ~~A~~~g~~~~~~~~~es~ 302 (370)
T 1chr_A 284 AVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHTCEEEECCSCCTT
T ss_pred HHHHHcCCeEEecCCCccH
Confidence 9999999999977666543
No 111
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=82.08 E-value=23 Score=31.30 Aligned_cols=154 Identities=12% Similarity=0.055 Sum_probs=92.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-cC------------------------------CC---c------hHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK-YG------------------------------PY---T------NEILLGKALK 79 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~-Yg------------------------------~g---~------se~~lg~~l~ 79 (249)
+.++..+.++.+++.|++.|=.--. ++ .+ . .....-++++
T Consensus 155 ~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR 234 (440)
T 3t6c_A 155 DEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDHLR 234 (440)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHH
Confidence 6788888889999999999864321 11 00 0 1112233444
Q ss_pred cCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-
Q 025707 80 ELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK- 158 (249)
Q Consensus 80 ~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir- 158 (249)
+.-.+++-|.-.... .++++...+- -+.|+.+++++ +..|-.. +.++.+.+++++-.|.
T Consensus 235 ~a~G~d~~L~vDaN~----------~~~~~~A~~~-~~~L~~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPI 294 (440)
T 3t6c_A 235 NKLGFSVELLHDAHE----------RITPINAIHM-AKALEPYQLFF-----LEDPVAP----ENTEWLKMLRQQSSTPI 294 (440)
T ss_dssp HHHCSSSEEEEECTT----------CSCHHHHHHH-HHHTGGGCCSE-----EECSSCG----GGGGGHHHHHHHCCSCE
T ss_pred HhcCCCCeEEEECCC----------CCCHHHHHHH-HHHhhhcCCCE-----EECCCCh----hhHHHHHHHHhhcCCCE
Confidence 422234445444321 2444443322 23455565544 4444332 2356677777654443
Q ss_pred EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 159 YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 159 ~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
..|=+-++...+.++++...++++|+..+-+-. ....++.+.|+++|+.++..+.
T Consensus 295 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 295 AMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred EeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 445577889999999988889999998765432 1127899999999999987666
No 112
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=81.99 E-value=26 Score=30.80 Aligned_cols=154 Identities=7% Similarity=-0.003 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC------cCCCch------HHHHHHHHHcCCCCCeEEEecccccccCCcccccCCC
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK------YGPYTN------EILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~------Yg~g~s------e~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s 107 (249)
+.++..+..+.+++.|++.|..-.. +|.... ....-+++++.-.+++-|.-.... .++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~----------~~t 215 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG----------QFT 215 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCC
Confidence 6788889999999999999986321 221111 112233444422234444444321 244
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
++...+ +-+.|+.+++++ +..|-... .++.+.++++.-.|. ..|=+-++...++++++...++++|+..
T Consensus 216 ~~~A~~-~~~~Le~~~i~~-----iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 216 TAGAIR-LGQAIEPYSPLW-----YEEPVPPD----NVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp HHHHHH-HHHHHGGGCCSE-----EECCSCTT----CHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHHH-HHHHhhhcCCCE-----EECCCChh----hHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 544433 334567776654 44554332 356677777765454 3455678899999999888899999976
Q ss_pred Ccccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 187 SLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 187 n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+-.-. ....++.+.|+++|+.+...++
T Consensus 286 ~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 286 GRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 54422 1127799999999999987764
No 113
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=81.82 E-value=4.5 Score=31.93 Aligned_cols=64 Identities=14% Similarity=0.184 Sum_probs=43.1
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCHHHHHHHhhcCCceEEeee
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
..+|.|++-+++..........+.+-+....+ ...+..+||- |.+++.+.+..+..+++++|+.
T Consensus 19 ~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~--~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 19 VESGADAVGFVFYPKSKRYISPEDARRISVEL--PPFVFRVGVFVNEEPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHHHHHHHHS--CSSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred HHcCCCEEEEEecCCCCCcCCHHHHHHHHHhC--CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 36899999998543223334444443332222 2468889984 6788888888888889999995
No 114
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=81.81 E-value=25 Score=30.44 Aligned_cols=151 Identities=9% Similarity=0.016 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHcCCCeEeC-CCCc--CCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCC-CHHHHHHHHHHH
Q 025707 43 DGISIIKHAFSKGITFFDT-ADKY--GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEAS 118 (249)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~Dt-a~~Y--g~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~-s~~~i~~~~~~s 118 (249)
+..+.++.+.+.|++.|-. --.. .+.......-+++++.-.+++-|.-... ..+ +.+...+-+ +.
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~d~~l~vDaN----------~~~~~~~~A~~~~-~~ 228 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGHDTDMMVDYL----------YRFTDWYEVARLL-NS 228 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCSSSEEEEECT----------TCCCCHHHHHHHH-HH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCCCCeEEEeCC----------CCCCCHHHHHHHH-HH
Confidence 5556788888999999976 2221 1111222333455542223333333321 124 454443333 34
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++++ +..|-...+ ++.+.++++.-.|. ..|=+-++...++++++...++++|+..+-.-. ....+
T Consensus 229 L~~~~i~~-----iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ 299 (394)
T 3mkc_A 229 IEDLELYF-----AEATLQHDD----LSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRR 299 (394)
T ss_dssp TGGGCCSE-----EESCSCTTC----HHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred hhhcCCeE-----EECCCCchh----HHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHH
Confidence 56666544 455543333 56677777765554 334456778899999988889999998766432 12277
Q ss_pred HHHHHHHhCCcEEeccc
Q 025707 197 IVPLCRELGIGIVPYCP 213 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~sp 213 (249)
+.+.|+++|+.++..+.
T Consensus 300 ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 300 ITEMATANNVQVMPHNW 316 (394)
T ss_dssp HHHHHHHTTCEECCCCC
T ss_pred HHHHHHHcCCEEeecCC
Confidence 99999999999987764
No 115
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=81.61 E-value=20 Score=31.32 Aligned_cols=155 Identities=9% Similarity=-0.001 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-------cCC---------------C----------chHHHHHHHHHcCCCCCeE
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK-------YGP---------------Y----------TNEILLGKALKELPRENIQ 87 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~-------Yg~---------------g----------~se~~lg~~l~~~~r~~~~ 87 (249)
+.++..+.++.+++.|++.|-.--. ||. + .....+-+++++.-.+++-
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~ 222 (418)
T 3r4e_A 143 DIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHH 222 (418)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCe
Confidence 5788888999999999999874211 221 0 0112223444442123444
Q ss_pred EEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCC
Q 025707 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEAS 166 (249)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~ 166 (249)
|.-.... .++.+...+ +-+.|+.+++++| ..|-... .++.+.+++++-.|.- .|=+-++
T Consensus 223 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 282 (418)
T 3r4e_A 223 LLHDGHH----------RYTPQEAAN-LGKMLEPYQLFWL-----EDCTPAE----NQEAFRLVRQHTVTPLAVGEIFNT 282 (418)
T ss_dssp EEEECTT----------CSCHHHHHH-HHHHHGGGCCSEE-----ESCSCCS----SGGGGHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhhCCCEE-----ECCCCcc----CHHHHHHHHhcCCCCEEEcCCcCC
Confidence 4433321 245554433 3345667776554 4553322 2455677777655543 3445678
Q ss_pred HHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 167 PDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
.+.++++++...++++|+..+-+-. ....++.+.|+++|+.++..+++
T Consensus 283 ~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 283 IWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8888999888889999998766432 12278999999999999988875
No 116
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=81.40 E-value=23 Score=29.81 Aligned_cols=158 Identities=12% Similarity=-0.014 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (249)
.++..+.++.+++.|++.|-.--.-.+-..+...-+++++.-.+++-|.--. + ..++++...+-++ .|+
T Consensus 117 ~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~~g~~~~L~vDa--N--------~~~~~~~A~~~~~-~l~ 185 (332)
T 2ozt_A 117 GQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAALPPGAKLRLDA--N--------GSWDRATANRWFA-WLD 185 (332)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHSCTTCEEEEEC--T--------TCCCHHHHHHHHH-HHH
T ss_pred hHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHHcCCCCEEEEcc--c--------CCCCHHHHHHHHH-HHH
Confidence 4556677788889999988653221100112222344444212233332211 1 1245665554443 355
Q ss_pred HcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCC-eeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHH
Q 025707 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVP 199 (249)
Q Consensus 121 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~ 199 (249)
.++ ..++.++..|-...+ ++.+.++.+.-. =-..|=|.++...+.++++....+++|+..+..-. ..++.+
T Consensus 186 ~~~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik~~~~GG--i~~i~~ 257 (332)
T 2ozt_A 186 RHG--NGKIEYVEQPLPPDQ----WQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVIKTALFGD--PDSLSL 257 (332)
T ss_dssp HHC--CTTEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHSC--HHHHHH
T ss_pred hhc--cCCcceeECCCCCCC----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEChhhhCC--HHHHHH
Confidence 552 126788888865444 455566665433 33556677889999999887777888887554422 157899
Q ss_pred HHHHh--CCcEEecccCccc
Q 025707 200 LCREL--GIGIVPYCPLGRG 217 (249)
Q Consensus 200 ~~~~~--gi~v~a~spl~~G 217 (249)
.|+++ |+.++..+.+..+
T Consensus 258 ~A~~~~~gi~~~~~~~~es~ 277 (332)
T 2ozt_A 258 LLRRGLEPQRLVFSSALEGA 277 (332)
T ss_dssp HHHTTCCGGGEEEBCCSCCH
T ss_pred HHHHhCCCCcEEEeCCcchH
Confidence 99999 9999988776544
No 117
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=81.24 E-value=10 Score=33.73 Aligned_cols=157 Identities=11% Similarity=0.066 Sum_probs=90.6
Q ss_pred CHHHHHHHHHHHH-HcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAF-SKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 40 ~~~~~~~~l~~A~-~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
+.++..+....++ +.|++.|=.--...++..+...-+++++ .+.-++.| - .+. .++++... +
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~~~~~di~~v~avrea~pd~~L~v--D--aN~--------~wt~~~Ai----~ 265 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVLDGFEEAEAVTALAKRFPDARITL--D--PNG--------AWSLDEAV----K 265 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEE--E--CTT--------CBCHHHHH----H
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHhhCCCceEEE--E--CCC--------ccCHHHHH----H
Confidence 4555556666666 4599987543322222223333345554 44223322 1 111 23444332 3
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~ 196 (249)
.++.|. ++ +.++..|-...+.....+.+.++++.-.| -+.|-+.++...+.++++...++++|.....---....+
T Consensus 266 ~~~~le-~~--l~wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~d~~~GGit~~~k 342 (464)
T 4g8t_A 266 IGKQLK-GV--LAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLADPHFWTMQGSIR 342 (464)
T ss_dssp HHHHTT-TT--CSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHhh-hc--cceeecCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEeccccccchHHHHH
Confidence 455664 33 44566665444443445666666655333 467888999999999998888888888743211112278
Q ss_pred HHHHHHHhCCcEEecccCc
Q 025707 197 IVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~ 215 (249)
+.+.|+++|+.+...+...
T Consensus 343 ia~lA~~~gi~v~~h~~~~ 361 (464)
T 4g8t_A 343 VAQMCHEWGLTWGSHSNNH 361 (464)
T ss_dssp HHHHHHHHTCCCBCCCCSC
T ss_pred HHHHHHHcCCEEEEcCCcc
Confidence 9999999999998876543
No 118
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=81.01 E-value=28 Score=30.41 Aligned_cols=154 Identities=10% Similarity=0.009 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC--cCC--C--c------hHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCC
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK--YGP--Y--T------NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~--Yg~--g--~------se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s 107 (249)
+.++..+..+.+++.|++.|-.-.. |.. | . .....-+++++.-.+++-|.-.... .++
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~----------~~~ 213 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG----------QMV 213 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCC
Confidence 6788888888999999999987432 110 0 0 1112223444422234444444321 244
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
.+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|. ..|=+-++...++++++...++++|+..
T Consensus 214 ~~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 214 PSSAIR-LAKRLEKYDPLWF-----EEPVPPG----QEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCSS----CHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred HHHHHH-HHHHhhhcCCcEE-----ECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 544433 3345667776544 4553333 356777888765554 3344567788899999888899999987
Q ss_pred Ccccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 187 SLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 187 n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+-.-. ....++.+.|+++|+.+.....
T Consensus 284 ~~~GGit~~~kia~~A~~~gi~v~~h~~ 311 (412)
T 4e4u_A 284 ARVGGLLEAKKIATLAEVHYAQIAPHLY 311 (412)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCEECCCCC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 66432 1227799999999999876643
No 119
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=79.44 E-value=30 Score=29.90 Aligned_cols=151 Identities=11% Similarity=0.017 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHcCCCeEeC-CCCc--CCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCC-CHHHHHHHHHHH
Q 025707 43 DGISIIKHAFSKGITFFDT-ADKY--GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEAS 118 (249)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~Dt-a~~Y--g~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~-s~~~i~~~~~~s 118 (249)
+..+.++.+.+.|++.|-. --.. .+-......-+++++.-.+++-|.-... ..+ +.+...+ +-+.
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~d~~l~vDan----------~~~~~~~~A~~-~~~~ 223 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGWDMDMMVDCL----------YRWTDWQKARW-TFRQ 223 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCSSSEEEEECT----------TCCSCHHHHHH-HHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCCCCeEEEECC----------CCCCCHHHHHH-HHHH
Confidence 4556788888999999976 2221 1111222333445542223333433321 124 4444433 3345
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+|+++ +..|-...+ ++.+.++++.-.|.-. |=+-++...++++++...++++|+..+-.-. ....+
T Consensus 224 L~~~~i~~-----iEeP~~~~~----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ 294 (394)
T 3mqt_A 224 LEDIDLYF-----IEACLQHDD----LIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLR 294 (394)
T ss_dssp TGGGCCSE-----EESCSCTTC----HHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHH
T ss_pred HhhcCCeE-----EECCCCccc----HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHH
Confidence 56666554 455543332 5667777776555433 4456778888888888788999998766432 12277
Q ss_pred HHHHHHHhCCcEEeccc
Q 025707 197 IVPLCRELGIGIVPYCP 213 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~sp 213 (249)
+.+.|+++|+.++..+.
T Consensus 295 ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 295 IMDICEHHNAQLMPHNW 311 (394)
T ss_dssp HHHHHHHHTCEECCCCC
T ss_pred HHHHHHHcCCEEeccCC
Confidence 99999999999987764
No 120
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=79.40 E-value=5.1 Score=33.34 Aligned_cols=103 Identities=12% Similarity=0.026 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
.+.+. ...+=+.|.++|+++|.+-....+.......+.++.++.+.+...++...+. .+.+.++++.+. .++.+.+.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~-G~~~V~i~ 99 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAA-HADEIAVF 99 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHT-TCSEEEEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHC-CCCEEEEE
Confidence 44444 4556667788999999987664443211123566667777665566766665 567788887775 44555554
Q ss_pred cCcc--------ccch------hhhHHHHHHHhCCcEEec
Q 025707 186 WSLW--------ARDI------ENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 186 ~n~~--------~~~~------~~~~~~~~~~~gi~v~a~ 211 (249)
.+.- .+.. ..+++++|+++|+.|.++
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~ 139 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGY 139 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 2211 1111 156799999999998754
No 121
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=78.94 E-value=19 Score=31.39 Aligned_cols=155 Identities=12% Similarity=0.079 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC-----------------chHHHH------HHHHHcCCCCCeEEEecccccc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-----------------TNEILL------GKALKELPRENIQVATKFGFVE 96 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g-----------------~se~~l------g~~l~~~~r~~~~I~tK~~~~~ 96 (249)
+.++..+.++.+.+.|++.|-.-.....+ .....+ -+++++...+++-|.--...
T Consensus 153 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan~-- 230 (421)
T 4hnl_A 153 NLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQMLHDVHE-- 230 (421)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCceEeccccc--
Confidence 57788888999999999998643221000 111111 12333322234444333221
Q ss_pred cCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhh
Q 025707 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHA 175 (249)
Q Consensus 97 ~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 175 (249)
.++++...+- -+.|+.+ +++++..|-.. +-++.+.+|+++-.|. ..|=+.++...+.++++
T Consensus 231 --------~~~~~~A~~~-~~~l~~~-----~i~~iEeP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~ 292 (421)
T 4hnl_A 231 --------RLHPNQAIQF-AKAAEPY-----QLFFLEDILPP----DQSHWLTQLRSQSATPIATGELFNNPMEWQELVK 292 (421)
T ss_dssp --------CSCHHHHHHH-HHHHGGG-----CCSEEECCSCG----GGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHH
T ss_pred --------cCCHHHHHHH-HHHhhhh-----hhcccccCCcc----cchHHHHHHHhcCCCCeecCcceehhHHHHHHHh
Confidence 2345544332 2334444 44566665432 2356677777664443 45667788889999998
Q ss_pred cCCceEEeeecCccccc-hhhhHHHHHHHhCCcEEecccC
Q 025707 176 VHPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 176 ~~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl 214 (249)
...++++|+..+-+-.- ...++.+.|+++|+.+...++.
T Consensus 293 ~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~ 332 (421)
T 4hnl_A 293 NRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPS 332 (421)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred cCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCc
Confidence 88899999987654321 1278999999999999877654
No 122
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=78.49 E-value=21 Score=31.62 Aligned_cols=96 Identities=15% Similarity=0.098 Sum_probs=70.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC--CCHHHHHHHhhcCCceEEe
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPDTIRRAHAVHPITAVQ 183 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~q 183 (249)
++++...+.+.+.++.+ +++++..|-...+ |+.+.+|.++..|.-+|=-. .+++.+.++++..-.+++|
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~dD----~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 340 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQDD----WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLL 340 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCccc----HHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEE
Confidence 36666666666667665 4788888865544 77788888888877766443 4889999999988888999
Q ss_pred eecCccccc-hhhhHHHHHHHhCCcEEe
Q 025707 184 LEWSLWARD-IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 184 ~~~n~~~~~-~~~~~~~~~~~~gi~v~a 210 (249)
+..|-+-.- ...++.+.|+++|+.++.
T Consensus 341 iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 341 LKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 876644321 126899999999998755
No 123
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=78.25 E-value=9.4 Score=31.24 Aligned_cols=158 Identities=14% Similarity=-0.010 Sum_probs=85.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCC---chHHHHHHHHHc---C---CCCCeEEEecccccccCCcccccCCCHH
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGPY---TNEILLGKALKE---L---PRENIQVATKFGFVELGFTSVIVKGTPE 109 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g---~se~~lg~~l~~---~---~r~~~~I~tK~~~~~~~~~~~~~~~s~~ 109 (249)
.+.+++.++++.|.+.|+..|=.++++..+ ...+.+-+.+.+ . ...++.| ..|... ...++
T Consensus 17 ~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I--~~G~Ev--------~~~~~ 86 (262)
T 3qy7_A 17 GDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHV--LPGQEI--------RIYGE 86 (262)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEE--ECCCEE--------ECCTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEE--ecCeEE--------ecchh
Confidence 378999999999999999999888876421 122333333322 1 1122222 223211 23333
Q ss_pred HHHHHHHH-HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC------CCHHHHHHHhhcCCceEE
Q 025707 110 YVRSCCEA-SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAV 182 (249)
Q Consensus 110 ~i~~~~~~-sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~------~~~~~l~~~~~~~~~~~~ 182 (249)
. ...+++ .+..|+ --|.+++..+.... ...+.+.+.++.+.|.+--||=-. ...+.+.++.+.. ...
T Consensus 87 ~-~~~l~~~~~~~l~--~~~~vl~e~~~~~~-~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G--~~i 160 (262)
T 3qy7_A 87 V-EQDLAKRQLLSLN--DTKYILIEFPFDHV-PRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKG--AAS 160 (262)
T ss_dssp H-HHHHHTTCSCCGG--GSSEEEEECCTTCC-CTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTT--CEE
T ss_pred H-HHHHhcCCCcEEC--CceEEEEeCCCccC-HHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCC--CEE
Confidence 2 223333 222232 22456666553322 245677788888888887776432 1224455555543 346
Q ss_pred eeecCcccc---chhhhHHHHHHHhCCcEEecc
Q 025707 183 QLEWSLWAR---DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 183 q~~~n~~~~---~~~~~~~~~~~~~gi~v~a~s 212 (249)
|++.+.+.. .........|.+.|+.++.-|
T Consensus 161 EiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igS 193 (262)
T 3qy7_A 161 QITSGSLAGIFGKQLKAFSLRLVEANLIHFVAS 193 (262)
T ss_dssp EEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEEC
T ss_pred EEECCccCcccchHHHHHHHHHHhCCCeEEEEc
Confidence 776554432 112556777777888766544
No 124
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=78.02 E-value=34 Score=29.67 Aligned_cols=155 Identities=14% Similarity=0.162 Sum_probs=94.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-cCC-------------C---------chHHHHHHHHHcCCCCCeEEEecccccc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK-YGP-------------Y---------TNEILLGKALKELPRENIQVATKFGFVE 96 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~-Yg~-------------g---------~se~~lg~~l~~~~r~~~~I~tK~~~~~ 96 (249)
+.++..+.++.+++.|++.|-.--. ++. | +.....-+++++.-.+++-|.-....
T Consensus 133 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~-- 210 (401)
T 3sbf_A 133 TMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHE-- 210 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 5788888999999999999874211 110 0 01122234444421234444444321
Q ss_pred cCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhh
Q 025707 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHA 175 (249)
Q Consensus 97 ~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 175 (249)
.++++...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|. ..|=+-++...++++++
T Consensus 211 --------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 272 (401)
T 3sbf_A 211 --------RLFPNQAIQ-FAKEVEQYKPYFI-----EDILPPN----QTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIA 272 (401)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSCE-----ECSSCTT----CGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChh----HHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHh
Confidence 245554433 3345677776655 3443322 245677777765454 33456688899999998
Q ss_pred cCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 176 VHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 176 ~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
...++++|+..+-.-. ....++.+.|+++|+.++..++.
T Consensus 273 ~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 273 NRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 8889999998765432 11277999999999999887763
No 125
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=78.01 E-value=7.7 Score=32.40 Aligned_cols=102 Identities=8% Similarity=-0.001 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
++.+. ...+-+.|.++|+++|.+-...+|.......+.++.+..+.+...++..++. .+.+.++++++. .++.+.+.
T Consensus 27 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~a-G~~~v~i~ 103 (302)
T 2ftp_A 27 IEVAD-KIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALES-GVKEVAVF 103 (302)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHT-TCCEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhC-CcCEEEEE
Confidence 44444 4556667899999999998865554221112333444455445566666666 577888888775 44555542
Q ss_pred cCccc--------cc------hhhhHHHHHHHhCCcEEe
Q 025707 186 WSLWA--------RD------IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 186 ~n~~~--------~~------~~~~~~~~~~~~gi~v~a 210 (249)
...-+ .. ...+++++|+++|+.|.+
T Consensus 104 ~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~ 142 (302)
T 2ftp_A 104 AAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRG 142 (302)
T ss_dssp EESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 22211 00 116789999999999864
No 126
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=77.91 E-value=34 Score=29.73 Aligned_cols=156 Identities=13% Similarity=0.118 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|=.....+.....+.+ +++++.-.+++-|.--.. ..++++...+- +
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v-~~vR~~~g~~~~l~vDaN----------~~~~~~~A~~~----~ 252 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEM-EILRERLGPAVRIACDMH----------WAHTASEAVAL----I 252 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHH-HHHHHHHCSSSEEEEECC----------SCCCHHHHHHH----H
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHH-HHHHhccCCeEEEEeccc----------cCCCHHHHHHH----H
Confidence 56777788888899999998765433322233333 344431123333322211 12444443332 2
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.| +..++.++..|-...+ ++.+.+|+++-.| -..|=+.++...+.++++...++++|....- -. ....++
T Consensus 253 ~~l--~~~~l~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~-GGit~~~ki 325 (412)
T 4h1z_A 253 KAM--EPHGLWFAEAPVRTED----IDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMGH-KGITQFMRI 325 (412)
T ss_dssp HHH--GGGCEEEEECCSCTTC----HHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHH-HHHHHHHHH
T ss_pred Hhh--cccccceecCCCCccc----hHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEecCCC-CChHHHHHH
Confidence 333 2346788888755544 4556677665443 3456788899999999988888999987531 11 112678
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.+...+++..|
T Consensus 326 a~~A~~~gi~v~~h~~~~~~ 345 (412)
T 4h1z_A 326 GAYAHVHHIKVIPHATIGAG 345 (412)
T ss_dssp HHHHHHTTCEECCCCCSSCS
T ss_pred HHHHHHCCCcEEecCCcchH
Confidence 89999999999998877665
No 127
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=77.48 E-value=10 Score=29.85 Aligned_cols=64 Identities=13% Similarity=0.131 Sum_probs=43.4
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCHHHHHHHhhcCCceEEeee
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
..+|.|++-+++..........+.+-+....+ ...+..+||- |.+++.+.+..+..+++++|+.
T Consensus 18 ~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~--~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 18 EALGAFALGFVLAPGSRRRIAPEAARAIGEAL--GPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHHHHHHHHS--CSSSEEEEEESSCCHHHHHHHHHHTTCSEEEEC
T ss_pred HHcCCCEEEEEecCCCCCcCCHHHHHHHHHhC--CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 36899999998543223334444443332222 2458889985 5788899998888999999995
No 128
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=77.35 E-value=38 Score=29.95 Aligned_cols=96 Identities=10% Similarity=0.073 Sum_probs=68.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC-CeeEEE--cCCCCHHHHHHHhhcCCceEE
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIG--LSEASPDTIRRAHAVHPITAV 182 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iG--vs~~~~~~l~~~~~~~~~~~~ 182 (249)
.+++.+.+-+.+.++.+. ++++..|-...+ |+.+.+|.++- +|.-+| +...+++.++++++....+++
T Consensus 279 ~t~~elid~y~~lle~yp-----I~~IEDPl~~dD----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~I 349 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHYP-----IASIEDPFAEDD----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSV 349 (441)
T ss_dssp ECHHHHHHHHHHHHHHSC-----EEEEESCSCTTC----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred cCHHHHHHHHHHHhhhcc-----eeeecCCCChHH----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEE
Confidence 467777777777777654 788888866555 44445554443 577677 334579999999988888888
Q ss_pred eeecCccccc-hhhhHHHHHHHhCCcEEe
Q 025707 183 QLEWSLWARD-IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 183 q~~~n~~~~~-~~~~~~~~~~~~gi~v~a 210 (249)
++..|=.-.- ...++.+.|+++|+.++.
T Consensus 350 lIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 350 LIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp EECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 8877654321 127789999999999775
No 129
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=75.96 E-value=40 Score=29.48 Aligned_cols=155 Identities=10% Similarity=0.014 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC-------CcCC---------------C----------chHHHHHHHHHcCCCCCeE
Q 025707 40 SEEDGISIIKHAFSKGITFFDTAD-------KYGP---------------Y----------TNEILLGKALKELPRENIQ 87 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~-------~Yg~---------------g----------~se~~lg~~l~~~~r~~~~ 87 (249)
+.++..+.++.+++.|++.|=.-- .||. + ......-+++++.-.+++-
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~ 228 (424)
T 3v3w_A 149 DLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIH 228 (424)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCc
Confidence 578888889999999999885321 1221 0 0112223445442123344
Q ss_pred EEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCC
Q 025707 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEAS 166 (249)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~ 166 (249)
|.-.... .++.+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|.- .|=+-++
T Consensus 229 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 288 (424)
T 3v3w_A 229 LLHDVHH----------RLTPIEAAR-LGKALEPYHLFWM-----EDAVPAE----NQESFKLIRQHTTTPLAVGEVFNS 288 (424)
T ss_dssp EEEECTT----------CCCHHHHHH-HHHHHGGGCCSEE-----ECCSCCS----STTHHHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChH----hHHHHHHHHhhCCCCEEEccCcCC
Confidence 4333221 245554433 3345677776554 4553322 2455677776655543 3445678
Q ss_pred HHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 167 PDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
...++++++...++++|+..+-+-. ....++.+.|+++|+.++..+++
T Consensus 289 ~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 289 IHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 8888899888889999998766532 12278999999999999988875
No 130
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=75.95 E-value=24 Score=30.93 Aligned_cols=154 Identities=13% Similarity=0.153 Sum_probs=93.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-cC-------------CC---c------hHHHHHHHHHcCCCCCeEEEecccccc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK-YG-------------PY---T------NEILLGKALKELPRENIQVATKFGFVE 96 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~-Yg-------------~g---~------se~~lg~~l~~~~r~~~~I~tK~~~~~ 96 (249)
+.++..+.++.+++.|++.|-.--. ++ .| . .....-+++++.-.+++-|.-....
T Consensus 154 ~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~-- 231 (422)
T 3tji_A 154 TLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHE-- 231 (422)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 5788888899999999999874211 11 00 0 1122234454422234444444321
Q ss_pred cCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhh
Q 025707 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHA 175 (249)
Q Consensus 97 ~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 175 (249)
.++++...+ +-+.|+.++++++ ..|-.. +.++.+.++++.-.|. ..|=+-++.+.++++++
T Consensus 232 --------~~~~~~A~~-~~~~Le~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~ 293 (422)
T 3tji_A 232 --------RLFPQQAVQ-LAKQLEPFQPYFI-----EDILPP----QQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIV 293 (422)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSEE-----ECCSCG----GGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhhCCCeE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHh
Confidence 245554433 2345666766544 444322 2356677777764444 33446678888899998
Q ss_pred cCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 176 VHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 176 ~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
...++++|+..+-.-. ....++.+.|+++|+.+...++
T Consensus 294 ~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~ 332 (422)
T 3tji_A 294 NRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGP 332 (422)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCC
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 8889999997765432 1127899999999999988776
No 131
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=75.79 E-value=22 Score=30.66 Aligned_cols=176 Identities=10% Similarity=0.027 Sum_probs=98.5
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEe
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVAT 90 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~t 90 (249)
++-||..--+++....+.. ++. +.++..+.++.+.+.|++.|-.-....+...+...-+++++.-.+++.|.-
T Consensus 142 ~~LLGg~~~~~~~y~~~~~-----~~~--~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~~G~~~~l~v 214 (388)
T 4h83_A 142 WKLWGGYRNELPMIAIGGY-----YGE--PLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICI 214 (388)
T ss_dssp HHHTTCSCSEEEEEEEECC-----TTC--TTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred hhhcCCCcCceEEEeeccc-----cCC--CHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4445544444555544432 111 345566677888899999986543211111122222344432223333332
Q ss_pred cccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHH
Q 025707 91 KFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDT 169 (249)
Q Consensus 91 K~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~ 169 (249)
-... .++++... +.+++|. ..++.++..|-.. .+-++.+.++++...| -..|=|.++...
T Consensus 215 DaN~----------~~~~~~A~----~~~~~l~--~~~~~~iEeP~~~---~~d~~~~~~l~~~~~ipIa~dE~~~~~~~ 275 (388)
T 4h83_A 215 DANQ----------GYKPAVAV----DLSRRIA--DLNIRWFEEPVEW---HNDKRSMRDVRYQGSVPVCAGQTEFSASG 275 (388)
T ss_dssp ECTT----------CBCHHHHH----HHHHHTT--TSCCCCEESCBCS---TTHHHHHHHHHHHSSSCEEECTTCSSHHH
T ss_pred ecCc----------CCCHHHHH----HHHHHhh--hcCcceeecCccc---ccchHHHHHHHhhcCCCccCCccccChHh
Confidence 2211 23444332 3334442 3455666666332 2345666777766554 355778899999
Q ss_pred HHHHhhcCCceEEeeecCccccc-hhhhHHHHHHHhCCcEEecc
Q 025707 170 IRRAHAVHPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 170 l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~s 212 (249)
+.++++...++++|+...-.-.- ...++.+.|+++|+.|..+.
T Consensus 276 ~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~gv~v~~h~ 319 (388)
T 4h83_A 276 CRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHE 319 (388)
T ss_dssp HHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHTTCEECCCS
T ss_pred HHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 99999888899999976554221 12778999999999876543
No 132
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=75.11 E-value=16 Score=32.31 Aligned_cols=158 Identities=12% Similarity=0.063 Sum_probs=89.1
Q ss_pred CCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..+..+.+++ .|++.|=.--...+...+...-+++++.- +++-|.--... .++++.. .+
T Consensus 181 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-pd~~L~vDaN~----------~w~~~~A----~~ 245 (450)
T 3mzn_A 181 MTPEAVANLARAAYDRYGFKDFKLKGGVLRGEEEADCIRALHEAF-PEARLALDPNG----------AWKLDEA----VR 245 (450)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTT----------CBCHHHH----HH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHHhC-CCCeEEEECCC----------CCCHHHH----HH
Confidence 367888888888887 69999865422211122233334555422 33444332211 2344332 23
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~ 196 (249)
.++.|. ++ +.++..|-...+.-.-++.+.++++.-.| -+.|-+.++...+.++++...++++|.....---....+
T Consensus 246 ~~~~L~-~~--i~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~k 322 (450)
T 3mzn_A 246 VLEPIK-HL--LSYAEDPCGQEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLADCHFWTMQGAVA 322 (450)
T ss_dssp HHGGGG-GG--CSEEESSBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHhh-hc--cceeeCCCCcccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHH
Confidence 445553 23 56777765444321114455555554222 345667778888888888777888887642111111278
Q ss_pred HHHHHHHhCCcEEecccC
Q 025707 197 IVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl 214 (249)
+.+.|+++|+.+...+..
T Consensus 323 ia~lA~a~gv~~~~h~~~ 340 (450)
T 3mzn_A 323 VGELCNEWGMTWGSHSNN 340 (450)
T ss_dssp HHHHHHHTTCCCBCCCCS
T ss_pred HHHHHHHcCCEEEecCCc
Confidence 999999999998776654
No 133
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=75.10 E-value=7.6 Score=33.14 Aligned_cols=105 Identities=14% Similarity=0.185 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEE-----EeecCCCCCCHHHHHHHHHHHHHc-CCeeEEEc---CCCCHHHHHHHhh
Q 025707 105 KGTPEYVRSCCEASLRRLDVEYIDLY-----YQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGL---SEASPDTIRRAHA 175 (249)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~d~iDl~-----~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGv---s~~~~~~l~~~~~ 175 (249)
..+.+.. ..+-+.|.++|+++|.+- -.-.|.........|+.++++++. ..++...+ .....+.++++.+
T Consensus 26 ~~~~e~k-~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDV-RAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHH-HHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHH-HHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHh
Confidence 3455544 345556778999998883 222222111122356666666654 24555555 2224566777666
Q ss_pred cCCceEEeeecCccccchhhhHHHHHHHhCCcEEec
Q 025707 176 VHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 176 ~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~ 211 (249)
. .++.+.+..++-+.......+++|+++|+.+...
T Consensus 105 a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 105 A-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp H-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred C-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 5 4444444433222122378999999999988765
No 134
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=74.89 E-value=20 Score=31.96 Aligned_cols=158 Identities=12% Similarity=0.037 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..+..+.+++ .|++.|=.--...+...+...-+++++.- +++-|.--... .++++. ..+
T Consensus 199 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~-pd~~L~vDaN~----------~w~~~~----Ai~ 263 (470)
T 3p0w_A 199 MTPAAIARLAEAATERYGFADFKLKGGVMPGAEEMEAIAAIKARF-PHARVTLDPNG----------AWSLNE----AIA 263 (470)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTT----------BBCHHH----HHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHHH----HHH
Confidence 367888888888888 69999865432211112222334455422 34444332211 234333 234
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~ 196 (249)
.++.|. ++ +.++..|-...+.-.-++.+.++++.-.| -..|-+.++...+.++++...++++|.....---....+
T Consensus 264 ~~~~Le-~~--l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~GGit~a~k 340 (470)
T 3p0w_A 264 LCKGQG-HL--VAYAEDPCGPEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLADPHFWTMQGSVR 340 (470)
T ss_dssp HHTTCT-TT--CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHhcc-cc--ceeecCCCChhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHH
Confidence 455664 34 56777775443321114455555544222 344667778888888888877888888642111111278
Q ss_pred HHHHHHHhCCcEEecccC
Q 025707 197 IVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl 214 (249)
+.+.|+++|+.+...+..
T Consensus 341 ia~lA~a~gv~~~~h~~~ 358 (470)
T 3p0w_A 341 VAQLCDEWGLTWGSHSNN 358 (470)
T ss_dssp HHHHHHHHTCCCBCCCCS
T ss_pred HHHHHHHcCCEEEecCCc
Confidence 999999999998876654
No 135
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=74.42 E-value=27 Score=30.99 Aligned_cols=157 Identities=12% Similarity=0.062 Sum_probs=88.2
Q ss_pred CCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
.+.++..+..+.+++ .|++.|=.--...+...+...-+++++ .+ ++-|.--.. ..++++.. .
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~p--d~~L~vDaN----------~~w~~~~A----~ 247 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFP--DARITLDPN----------GCWSLDEA----I 247 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCT--TCCEEEECT----------TBSCHHHH----H
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCCCHHHHHHHHHHHHHhCC--CCeEeecCC----------CCCCHHHH----H
Confidence 367888888888887 699988643222111122223344544 32 333322211 12344332 3
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhh
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIEN 195 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~ 195 (249)
+.++.|. ++ +.++..|-...+.-.-++.+.++++. +.=-..|-+.++...+.++++...++++|.....---....
T Consensus 248 ~~~~~L~-~~--l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~ 324 (455)
T 3pfr_A 248 QLCKGLN-DV--LTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGAS 324 (455)
T ss_dssp HHHTTCT-TT--CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHH
T ss_pred HHHHhhc-cc--ceeeecCCChhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecCCcCCHHHHH
Confidence 3455664 34 56777764443321124555666554 22234566777888888888877788888764211111127
Q ss_pred hHHHHHHHhCCcEEecccC
Q 025707 196 EIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl 214 (249)
++.+.|+++|+.+...+..
T Consensus 325 kia~lA~a~gv~~~~h~~~ 343 (455)
T 3pfr_A 325 RVAQLCNEWGLTWGCHSNN 343 (455)
T ss_dssp HHHHHHHHTTCCCBCCCCS
T ss_pred HHHHHHHHcCCEEEecCCc
Confidence 8999999999998776654
No 136
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=73.02 E-value=11 Score=31.75 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
++.+. +..+-+.|.++|+++|++-...+|.......+.++.+..+.+...++..++. -+...++.+.+. .++.+.+.
T Consensus 25 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~~-g~~~v~i~ 101 (307)
T 1ydo_A 25 IATED-KITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALV-PNQRGLENALEG-GINEACVF 101 (307)
T ss_dssp CCHHH-HHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHHHHH-TCSEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHHHhC-CcCEEEEE
Confidence 44443 4556678899999999998876654322122233444445444566666766 467778887765 23333332
Q ss_pred cCccc--------cc------hhhhHHHHHHHhCCcEEe
Q 025707 186 WSLWA--------RD------IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 186 ~n~~~--------~~------~~~~~~~~~~~~gi~v~a 210 (249)
.+.-+ .. ...+.+++++++|+.|.+
T Consensus 102 ~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~ 140 (307)
T 1ydo_A 102 MSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRA 140 (307)
T ss_dssp EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 22211 11 116789999999999864
No 137
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=72.17 E-value=46 Score=28.40 Aligned_cols=150 Identities=11% Similarity=0.045 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (249)
.++..+.+..+.+.|++.|-.-...+. ..+...-+++++.-.+++-|.--.. ..++++...+-+ +.|+
T Consensus 145 ~~~~~~~~~~~~~~Gf~~~K~k~g~~~-~~di~~v~avr~~~g~~~~l~vDaN----------~~~~~~~A~~~~-~~l~ 212 (378)
T 4hpn_A 145 VSDNASEMAERRAEGFHACKIKIGFGV-EEDLRVIAAVREAIGPDMRLMIDAN----------HGYTVTEAITLG-DRAA 212 (378)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHTTTSEEEEECT----------TCCCHHHHHHHH-HHHG
T ss_pred HHHHHHHHHHHHHhccceecccccCCh-HHHHHHHHHHHHhcCCcEEEEEecC----------cccCHHHHHHHH-hhhh
Confidence 455566677778899998865544331 1112223344432122333332211 124555443332 2344
Q ss_pred HcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhHH
Q 025707 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIV 198 (249)
Q Consensus 121 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~ 198 (249)
.+ ++.++..|-...+ ++.+.+|+++-.+ -..|=|.++...+.++++...++++|+...-.-.- ...++.
T Consensus 213 ~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia 283 (378)
T 4hpn_A 213 GF-----GIDWFEEPVVPEQ----LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIA 283 (378)
T ss_dssp GG-----CCSCEECCSCTTC----HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHH
T ss_pred hc-----ccchhhcCCCccc----hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHH
Confidence 44 4566776654444 4566777666444 35577888999999999988899999976654321 127899
Q ss_pred HHHHHhCCcEEec
Q 025707 199 PLCRELGIGIVPY 211 (249)
Q Consensus 199 ~~~~~~gi~v~a~ 211 (249)
+.|+++|+.++..
T Consensus 284 ~~A~~~gi~v~~h 296 (378)
T 4hpn_A 284 TLATLHGVRIVPH 296 (378)
T ss_dssp HHHHHHTCEECCB
T ss_pred HHHHHcCCeEEeC
Confidence 9999999998644
No 138
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=72.03 E-value=18 Score=28.18 Aligned_cols=155 Identities=11% Similarity=0.036 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+++.+.++++.|++.|+...+.-...- -..-..+|+-+ .++++++.--. ...+.+++.++...
T Consensus 15 d~~~~~~~~~~al~~g~~~~~i~~~~l-~p~m~~vG~~w---~~g~~~~~~~~-------------~~~~~~~~~l~~l~ 77 (210)
T 1y80_A 15 DEAQVVELTRSLLSGGAEPLEVINKGL-IAGMDRVGVLF---KNNEMFVPEVL-------------MSANAMNAGVEVVK 77 (210)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHH---cCCceeHHHHH-------------HHHHHHHHHHHHHH
Confidence 678899999999999876655432111 02333444333 23344432221 11222333333222
Q ss_pred HHcCCC---ceeEEEeecCCCC-CCHHHHHHHHHHHHHcCC-eeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-h
Q 025707 120 RRLDVE---YIDLYYQHRVDTS-VPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-I 193 (249)
Q Consensus 120 ~~Lg~d---~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~ 193 (249)
..+..+ .---+++..+..+ .++.. .=.-.-|...|. |.++|. +.+++.+.+......++++-+.+...... .
T Consensus 78 ~~~~~~~~~~~~~vll~~~~gd~H~iG~-~~va~~l~~~G~~v~~LG~-~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~ 155 (210)
T 1y80_A 78 QSQQAFDMPSVGKIVLGTVKGDLHDIGK-NLVAMMLESGGFTVYNLGV-DIEPGKFVEAVKKYQPDIVGMSALLTTTMMN 155 (210)
T ss_dssp -------CCCCCEEEEEEBTTCCCCHHH-HHHHHHHHHTTCEEEECCS-SBCHHHHHHHHHHHCCSEEEEECCSGGGTHH
T ss_pred HHhccccCCCCCEEEEEeCCCcccHHHH-HHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEeccccccHHH
Confidence 222211 1113445455443 34432 222235566774 666886 56777777777666677776665433221 1
Q ss_pred hhhHHHHHHHhC----CcEEeccc
Q 025707 194 ENEIVPLCRELG----IGIVPYCP 213 (249)
Q Consensus 194 ~~~~~~~~~~~g----i~v~a~sp 213 (249)
...+++.+++.| +.|+.-.+
T Consensus 156 ~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 156 MKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHHHHHHHHTTCGGGCEEEEEST
T ss_pred HHHHHHHHHhcCCCCCCeEEEECC
Confidence 277888898876 56655433
No 139
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=71.03 E-value=53 Score=28.69 Aligned_cols=155 Identities=10% Similarity=-0.015 Sum_probs=93.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC-------CcCC---------------C----------chHHHHHHHHHcCCCCCeE
Q 025707 40 SEEDGISIIKHAFSKGITFFDTAD-------KYGP---------------Y----------TNEILLGKALKELPRENIQ 87 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~-------~Yg~---------------g----------~se~~lg~~l~~~~r~~~~ 87 (249)
+.++..+.++.+++.|++.|=.-- .||. + +.....-+++++.-.+++-
T Consensus 150 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G~d~~ 229 (425)
T 3vcn_A 150 TIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLGWDVH 229 (425)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcCCCCE
Confidence 578888889999999999885311 1220 0 0112233455542123333
Q ss_pred EEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCC
Q 025707 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEAS 166 (249)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~ 166 (249)
|.-.... .++++...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|.- .|=+-++
T Consensus 230 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 289 (425)
T 3vcn_A 230 LLHDVHH----------RLTPIEAAR-LGKDLEPYRLFWL-----EDSVPAE----NQAGFRLIRQHTTTPLAVGEIFAH 289 (425)
T ss_dssp EEEECTT----------CCCHHHHHH-HHHHHGGGCCSEE-----ECCSCCS----STTHHHHHHHHCCSCEEECTTCCS
T ss_pred EEEECCC----------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChh----hHHHHHHHHhcCCCCEEeCCCcCC
Confidence 3333211 245554433 3345677776554 4553322 2455677776655543 3445678
Q ss_pred HHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 167 PDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
...++++++...++++|+..+-+-. ....++.+.|+++|+.++..+.+
T Consensus 290 ~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 290 VWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred HHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 8888999988889999998766432 12277999999999999887775
No 140
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=71.02 E-value=52 Score=28.56 Aligned_cols=150 Identities=9% Similarity=0.038 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC---------Cc--CCC----c----h------HHHHHHHHHcCCCCCeEEEecccc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTAD---------KY--GPY----T----N------EILLGKALKELPRENIQVATKFGF 94 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~---------~Y--g~g----~----s------e~~lg~~l~~~~r~~~~I~tK~~~ 94 (249)
+.++..+..+.+++.|++.|=.-- .| |.+ . . ....-+++++.-.+++-|.-....
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN~ 222 (409)
T 3go2_A 143 DLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLNF 222 (409)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 678888889999999999986432 01 100 0 0 012234444421234444444321
Q ss_pred cccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHH
Q 025707 95 VELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRA 173 (249)
Q Consensus 95 ~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~ 173 (249)
.++.+...+- -+.|+.+++++|. .|.. .++.+.++++.-.|.-. |=+-++.+.++++
T Consensus 223 ----------~~~~~~A~~~-~~~L~~~~i~~iE-----~P~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 280 (409)
T 3go2_A 223 ----------NAKPEGYLKI-LRELADFDLFWVE-----IDSY------SPQGLAYVRNHSPHPISSCETLFGIREFKPF 280 (409)
T ss_dssp ----------CSCHHHHHHH-HHHTTTSCCSEEE-----CCCS------CHHHHHHHHHTCSSCEEECTTCCHHHHHHHH
T ss_pred ----------CCCHHHHHHH-HHHHhhcCCeEEE-----eCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHH
Confidence 2445443332 2345566665554 3421 45667788876555433 4456778889999
Q ss_pred hhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEecc
Q 025707 174 HAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 174 ~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~s 212 (249)
++...++++|+..+- -. ....++.+.|+++|+.++...
T Consensus 281 i~~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~h~ 319 (409)
T 3go2_A 281 FDANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAPHN 319 (409)
T ss_dssp HHTTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEeecC
Confidence 988889999997754 21 112679999999999998754
No 141
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=69.09 E-value=20 Score=28.16 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=57.3
Q ss_pred EEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC--CceEEeeecCccccc---hhhhHHHHHHH
Q 025707 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARD---IENEIVPLCRE 203 (249)
Q Consensus 129 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~---~~~~~~~~~~~ 203 (249)
++++..|.. ...+++++...+-.++.-|++|=|.+.+-+...++.+.. .+.+|-..+..-.+. ...+..+..++
T Consensus 25 i~YF~~~G~-eNT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~~ 103 (206)
T 1t57_A 25 ICYFEEPGK-ENTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALLE 103 (206)
T ss_dssp EEEESSCSG-GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHHH
T ss_pred EEEecCCCc-ccHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHHh
Confidence 566665544 345666666444444445899999888777777777654 455555444443332 23889999999
Q ss_pred hCCcEEecccCccc
Q 025707 204 LGIGIVPYCPLGRG 217 (249)
Q Consensus 204 ~gi~v~a~spl~~G 217 (249)
.|+.|+..+=+-.|
T Consensus 104 ~G~~V~t~tH~lsG 117 (206)
T 1t57_A 104 RGVNVYAGSHALSG 117 (206)
T ss_dssp HTCEEECCSCTTTT
T ss_pred CCCEEEEeeccccc
Confidence 99999976665555
No 142
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=69.05 E-value=39 Score=28.90 Aligned_cols=155 Identities=14% Similarity=0.111 Sum_probs=86.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc---hHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~---se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
+.++..+.++.+.+.|++.|-.- .|... ..+.+. ++++ ...+++.|.--... .++++...+-+
T Consensus 162 ~~e~~~~~a~~~~~~G~~~~K~K--vg~~~~~~d~~~v~-avr~~~g~~~~~l~vDaN~----------~~~~~~a~~~~ 228 (377)
T 2pge_A 162 EAAFMQEQIEAKLAEGYGCLKLK--IGAIDFDKECALLA-GIRESFSPQQLEIRVDANG----------AFSPANAPQRL 228 (377)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE--C---CHHHHHHHHH-HHHHHSCTTTCEEEEECTT----------BBCTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhhheee--cCCCChHHHHHHHH-HHHHHcCCCCceEEEECCC----------CCCHHHHHHHH
Confidence 45777778888889999998743 22111 223333 3333 32134444443321 12333333333
Q ss_pred HHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHH--HHHHhhcCCceEEeeecCcccc-
Q 025707 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDT--IRRAHAVHPITAVQLEWSLWAR- 191 (249)
Q Consensus 116 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~--l~~~~~~~~~~~~q~~~n~~~~- 191 (249)
+.|+.+ ++.++..|-...+ ++.+.++.++-.|. ..|=+.++... +.++++...++++|+..+-.-.
T Consensus 229 -~~l~~~-----~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGi 298 (377)
T 2pge_A 229 -KRLSQF-----HLHSIEQPIRQHQ----WSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGF 298 (377)
T ss_dssp -HHHHTT-----CCSEEECCBCSSC----HHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSH
T ss_pred -HHHhcC-----CCcEEEccCCccc----HHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCH
Confidence 445554 4567777754444 55566666654443 23334344333 5677766677888887655422
Q ss_pred chhhhHHHHHHHhCCcEEecccCccc
Q 025707 192 DIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 192 ~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
....++.+.|+++|+.++..+.+..+
T Consensus 299 t~~~~i~~~A~~~g~~~~~~~~~es~ 324 (377)
T 2pge_A 299 HYAGQWIELARERGIGFWITSALESN 324 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEBCCSCCH
T ss_pred HHHHHHHHHHHHCCCeEEecCCcccH
Confidence 11267889999999999988776444
No 143
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=68.04 E-value=49 Score=27.16 Aligned_cols=165 Identities=8% Similarity=-0.059 Sum_probs=82.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC-chHHHHHHHHHc----CCCCCeEEEecccccccCCcccccCCCHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-TNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g-~se~~lg~~l~~----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~ 114 (249)
+.+++.+.++.+.+.|...++---.|-.. ..-..+.+.++. ...-.++++.+..... +. ...+.+.-.+
T Consensus 50 ~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eG---G~--~~~~~~~~~~- 123 (276)
T 3o1n_A 50 TITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEG---GE--QALTTGQYID- 123 (276)
T ss_dssp SHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGT---CS--BCCCHHHHHH-
T ss_pred CHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhC---CC--CCCCHHHHHH-
Confidence 67888888888888899888654333211 111334444432 2244566655543221 11 1234443333
Q ss_pred HHHHHHHcC-CCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC-----CCCHHHHHHHhhc---CCceEEeee
Q 025707 115 CEASLRRLD-VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-----EASPDTIRRAHAV---HPITAVQLE 185 (249)
Q Consensus 115 ~~~sL~~Lg-~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-----~~~~~~l~~~~~~---~~~~~~q~~ 185 (249)
+-+..-++| +||||+=+-.. ++.+..+.+..+++.++-|+=. +.+.+.+...+.. .+.+++=+-
T Consensus 124 ll~~~l~~g~~dyIDvEl~~~-------~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 124 LNRAAVDSGLVDMIDLELFTG-------DDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp HHHHHHHHTCCSEEEEEGGGC-------HHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHhcCCCCEEEEECcCC-------HHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 334444678 89999844211 3455555555456677777621 2233343333222 334444443
Q ss_pred cCccccchhhhHHHHHHH-----hCCcEEecccCccc
Q 025707 186 WSLWARDIENEIVPLCRE-----LGIGIVPYCPLGRG 217 (249)
Q Consensus 186 ~n~~~~~~~~~~~~~~~~-----~gi~v~a~spl~~G 217 (249)
..+-+......++.+..+ .++++++++.=..|
T Consensus 197 ~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G 233 (276)
T 3o1n_A 197 VMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTG 233 (276)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECSGGG
T ss_pred ecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECCCch
Confidence 333333222445555433 46777776544444
No 144
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=67.82 E-value=27 Score=31.08 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=45.6
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCHHHHHHHhhcCCceEEeee
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
..+|.||+-+++..........+.+-+.... -.+..+||- |.+++.+.+..+..+++++|+.
T Consensus 272 ~~~Gad~iGfIf~~~SpR~V~~~~a~~i~~~----~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLH 334 (452)
T 1pii_A 272 YDAGAIYGGLIFVATSPRCVNVEQAQEVMAA----APLQYVGVFRNHDIADVVDKAKVLSLAAVQLH 334 (452)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHHHHHHHH----CCCEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred HhcCCCEEEeecCCCCCCCCCHHHHHHHHhc----CCCCEEEEEeCCCHHHHHHHHHhcCCCEEEEC
Confidence 4679999999876544445555554443333 579999985 6788899999888899999994
No 145
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=67.77 E-value=58 Score=27.83 Aligned_cols=154 Identities=10% Similarity=0.013 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc-hHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT-NEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~-se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
+.++..+....+.+.|++.|=.--...+-. ..+.+. ++++ ..-+++-|.--.. ..++++... +
T Consensus 150 ~~~~~~~~a~~~~~~G~~~~KiKvg~~~~~~di~~v~-~vr~a~~g~~~~l~vDaN----------~~~~~~~A~----~ 214 (376)
T 4h2h_A 150 EPDEAARQALEKQREGYSRLQVKLGARPIEIDIEAIR-KVWEAVRGTGIALAADGN----------RGWTTRDAL----R 214 (376)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCSSCHHHHHHHHH-HHHHHHTTSCCEEEEECT----------TCCCHHHHH----H
T ss_pred CHHHHHHHHHHHHhcCceEEEEecCCCCHHHHHHHHH-HHHhhccCCeeEEEEeec----------cCCCHHHHH----H
Confidence 567777788888899999986532222101 122222 3322 2234444432221 124444433 2
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~ 195 (249)
.++.|. ..++ ++..|-. + ++.+.++++.-.+ -..|=+.++...+.++++..-++++|+...-.-.- ...
T Consensus 215 ~~~~l~--~~~~-~iEeP~~--~----~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~ 285 (376)
T 4h2h_A 215 FSRECP--DIPF-VMEQPCN--S----FEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMR 285 (376)
T ss_dssp HHHHCT--TSCE-EEESCSS--S----HHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEECCBHHHHTSHHHHH
T ss_pred HHHHHh--hccc-cccCCcc--h----hhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCccccccceeCCcHHHH
Confidence 344553 4455 5666532 2 3456666665433 34566778999999998888888888865433211 126
Q ss_pred hHHHHHHHhCCcEEecccCccc
Q 025707 196 EIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~~G 217 (249)
.+.+.|+++|+.+...+.+.++
T Consensus 286 ~ia~~a~~~gi~~~~~~~~~~~ 307 (376)
T 4h2h_A 286 AFRDFCAARNLPHTCDDAWGGD 307 (376)
T ss_dssp HHHHHHHHHTCCEECBCSSCSH
T ss_pred HHHHHHHHcCCCEEeCCCCccH
Confidence 7899999999999887665543
No 146
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=67.65 E-value=19 Score=28.18 Aligned_cols=87 Identities=20% Similarity=0.163 Sum_probs=53.0
Q ss_pred EEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC---CceEEeeecCccccc---hhhhHHHHHHH
Q 025707 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH---PITAVQLEWSLWARD---IENEIVPLCRE 203 (249)
Q Consensus 130 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~---~~~~~q~~~n~~~~~---~~~~~~~~~~~ 203 (249)
+++..|.. ...+++++...+-.++.-|++|=|.+.+-+...++.+.. .+.+|-..+..-.+. ...+..+..++
T Consensus 18 ~YF~~~G~-eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~ 96 (201)
T 1vp8_A 18 VYFNKPGR-ENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRK 96 (201)
T ss_dssp EEESSCSG-GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHH
T ss_pred EEecCCCc-ccHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHh
Confidence 44444332 345666666444444445899988887766666655543 344444444433322 23889999999
Q ss_pred hCCcEEecccCccc
Q 025707 204 LGIGIVPYCPLGRG 217 (249)
Q Consensus 204 ~gi~v~a~spl~~G 217 (249)
.|+.|+..+=+-.|
T Consensus 97 ~G~~V~t~tH~lsg 110 (201)
T 1vp8_A 97 RGAKIVRQSHILSG 110 (201)
T ss_dssp TTCEEEECCCTTTT
T ss_pred CCCEEEEEeccccc
Confidence 99999986665554
No 147
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=67.05 E-value=54 Score=28.88 Aligned_cols=96 Identities=10% Similarity=0.019 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC--CCHHHHHHHhhcCCceEEe
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPDTIRRAHAVHPITAVQ 183 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~q 183 (249)
++++...+.+.+.++.+ +++++..|-...+ |+.+.+|.++..|.-+|=-. .++..+.++++..-.+++|
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~dD----~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 343 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAEDD----WEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALL 343 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCcC----HHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEE
Confidence 36666666666667665 4688888755443 67777888777776666554 4789999999888888898
Q ss_pred eecCccccc-hhhhHHHHHHHhCCcEEe
Q 025707 184 LEWSLWARD-IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 184 ~~~n~~~~~-~~~~~~~~~~~~gi~v~a 210 (249)
+..|-.-.- ...++.+.|+++|+.++.
T Consensus 344 ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 344 LKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 876543221 126799999999998755
No 148
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=67.02 E-value=60 Score=27.79 Aligned_cols=152 Identities=14% Similarity=0.037 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|-.-- |.....+.+ +++++.- +++-|.--... .++++.. + .+
T Consensus 161 ~~~~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~-~~~~l~vDaN~----------~~~~~~a-~----~~ 221 (386)
T 1wue_A 161 DLPQLLKQVQLAVEKGYQRVKLKI--RPGYDVEPV-ALIRQHF-PNLPLMVDANS----------AYTLADL-P----QL 221 (386)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGGH-H----HH
T ss_pred CHHHHHHHHHHHHHhhhheEEEee--CcHHHHHHH-HHHHHhC-CCCeEEEeCCC----------CCCHHHH-H----HH
Confidence 467777778888899999875321 111233344 4555421 23333332211 2344443 2 23
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
++|. ..++.++..|-...+ ++.+.+|.++-.| -..|=+.++...+.++++...++++|+..+-.-. ....++
T Consensus 222 ~~l~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i 295 (386)
T 1wue_A 222 QRLD--HYQLAMIEQPFAADD----FLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKI 295 (386)
T ss_dssp HGGG--GSCCSCEECCSCTTC----SHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHH--hCCCeEEeCCCCccc----HHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHH
Confidence 3442 235566767654433 4556666655333 2445567888999999888888999997665422 112789
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+..
T Consensus 296 ~~~A~~~gi~~~~~~~~es 314 (386)
T 1wue_A 296 AAFCQENDLLVWLGGMFES 314 (386)
T ss_dssp HHHHHHTTCEEEECCCCCC
T ss_pred HHHHHHCCCeEEECCCccc
Confidence 9999999999988776544
No 149
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=66.72 E-value=52 Score=28.85 Aligned_cols=95 Identities=14% Similarity=0.079 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC--CeeEEEcCC--CCHHHHHHHhhcCCceEE
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG--KIKYIGLSE--ASPDTIRRAHAVHPITAV 182 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G--~ir~iGvs~--~~~~~l~~~~~~~~~~~~ 182 (249)
++..+.+-+.+.|+.+ +++++..|-...+ |+.+.+|.++- .|.-+|=-. ++++.+.++++..-.+++
T Consensus 273 ~a~~~~~~~~~~l~~y-----~i~~iEdPl~~~D----~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i 343 (432)
T 2ptz_A 273 TAEQLRETYCKWAHDY-----PIVSIEDPYDQDD----FAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSL 343 (432)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHHhC-----CceEEECCCCcch----HHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEE
Confidence 4555554555666655 5788888866554 56666666653 566566544 788999999988888999
Q ss_pred eeecCccccc-hhhhHHHHHHHhCCcEEe
Q 025707 183 QLEWSLWARD-IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 183 q~~~n~~~~~-~~~~~~~~~~~~gi~v~a 210 (249)
|+..|-.-.- ...++.+.|+++|+.++.
T Consensus 344 ~ik~~~~GGitea~~i~~lA~~~g~~v~~ 372 (432)
T 2ptz_A 344 LLKINQIGTISEAIASSKLCMENGWSVMV 372 (432)
T ss_dssp EECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEEe
Confidence 9976654321 127799999999999965
No 150
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=66.58 E-value=49 Score=27.12 Aligned_cols=162 Identities=13% Similarity=0.062 Sum_probs=90.4
Q ss_pred ccCcceeecccccCCCCC-CCCHH--HHHHHHHHHHHcCCCeEeC-CCCcCCCchHHHHHHHHHcCCCCCeEEEeccccc
Q 025707 20 EVSKLGYGCMSLSGCYNS-PLSEE--DGISIIKHAFSKGITFFDT-ADKYGPYTNEILLGKALKELPRENIQVATKFGFV 95 (249)
Q Consensus 20 ~vs~lg~Gt~~~~~~~~~-~~~~~--~~~~~l~~A~~~Gi~~~Dt-a~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~ 95 (249)
.|-.||.++|+... |.. -++.. ....+=.+|-..-+|.++. +..|.. .+++.+.++.++ -.+++..+-|....
T Consensus 12 ~~i~iG~sgW~~~~-W~G~fYP~~~~~~~~L~~Ya~~~~F~tVEiNsTFY~~-p~~~t~~~W~~~-tP~~F~F~vKa~r~ 88 (273)
T 1vpq_A 12 HMVYVGTSGFSFED-WKGVVYPEHLKPSQFLKYYWAVLGFRIVELNFTYYTQ-PSWRSFVQMLRK-TPPDFYFTVKTPGS 88 (273)
T ss_dssp CEEEEEEBCSCCST-TBTTTBCTTCCGGGHHHHHHHTSCCCEEEECCCSSSS-SCHHHHHHHHTT-SCTTCEEEEECCHH
T ss_pred ceEEEECCCCCCCC-cCcccCCCCCCchHHHHHHhCCCCCCeEEECccccCC-CCHHHHHHHHHh-CCCCeEEEEEeChh
Confidence 45567777776654 321 11111 2222323333225777765 446764 578888889884 56889999998753
Q ss_pred ccCCcccccCCCHHHHHHHHHHHHHHc--CCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHH
Q 025707 96 ELGFTSVIVKGTPEYVRSCCEASLRRL--DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA 173 (249)
Q Consensus 96 ~~~~~~~~~~~s~~~i~~~~~~sL~~L--g~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~ 173 (249)
......... ...+...+.+-++++-| | +++..+++.-|..-....+.++.|+.+.+.
T Consensus 89 iTh~~~~~~-~~~~~~~~~F~~~~~pL~~~-~kLG~vL~Q~Ppsf~~~~~~~~~L~~l~~~------------------- 147 (273)
T 1vpq_A 89 VTHVLWKEG-KDPKEDMENFTRQIEPLIEE-QRLKMTLAQFPFSFKFSRKNVEYLEKLRES------------------- 147 (273)
T ss_dssp HHHTHHHHT-CCSHHHHHHHHHHHHHHHHT-TCEEEEEEECCTTCCCCHHHHHHHHHHHHH-------------------
T ss_pred hcccccccc-cchHHHHHHHHHHHHhhccC-CCEEEEEEEcCCCCCCCHHHHHHHHHHHHH-------------------
Confidence 311100000 01122233444567777 7 789999998887755445566667776444
Q ss_pred hhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEe
Q 025707 174 HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVP 210 (249)
Q Consensus 174 ~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a 210 (249)
+ ....++++...-+.. .+++++++++|+..+.
T Consensus 148 l--~~~~AvE~Rh~sW~~---~~~~~lL~~~~v~~V~ 179 (273)
T 1vpq_A 148 Y--PYELAVEFRHYSWDR---EETYEFLRNHGITFVV 179 (273)
T ss_dssp C--CSCEEEECCBGGGCS---HHHHHHHHHHTCEEEE
T ss_pred c--CCCEEEEccCchhcc---HHHHHHHHHcCcEEEE
Confidence 0 112234443222222 4789999999998774
No 151
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=65.95 E-value=52 Score=26.67 Aligned_cols=190 Identities=14% Similarity=0.094 Sum_probs=97.7
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC-CchHHHHHHHHHc----C
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKE----L 81 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-g~se~~lg~~l~~----~ 81 (249)
.+++-..+|. | .|+||.-.. + .+.++..+-++.+.+.|...++-=-.|=. -.+...+.+.+.. .
T Consensus 8 v~v~~~~ig~-g--~PkIcvpl~---~-----~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~ 76 (258)
T 4h3d_A 8 VQVKNITIGE-G--RPKICVPII---G-----KNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYI 76 (258)
T ss_dssp EEETTEEETS-S--SCEEEEEEC---C-----SSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHC
T ss_pred EEEcCEEeCC-C--CCEEEEEeC---C-----CCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhc
Confidence 4566677764 3 577777433 1 26788888888888999988865444421 1234455555543 2
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG 161 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG 161 (249)
..-.++++.+..... +. ...+.+.-.+-+...++.-.+||+|+=+... ++..+.+.+..+++.++-|
T Consensus 77 ~~lPiI~T~Rt~~EG---G~--~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~-------~~~~~~l~~~a~~~~~kiI- 143 (258)
T 4h3d_A 77 HDIPLLFTFRSVVEG---GE--KLISRDYYTTLNKEISNTGLVDLIDVELFMG-------DEVIDEVVNFAHKKEVKVI- 143 (258)
T ss_dssp TTSCEEEECCCGGGT---CS--CCCCHHHHHHHHHHHHHTTCCSEEEEEGGGC-------HHHHHHHHHHHHHTTCEEE-
T ss_pred CCCCEEEEEechhhC---CC--CCCCHHHHHHHHHHHHhcCCchhhHHhhhcc-------HHHHHHHHHHHHhCCCEEE-
Confidence 234455555543222 11 1234554444444444444489999765432 2455555555556666555
Q ss_pred cCCC------CHHHHHHHhhc---CCceEEeeecCccccchhhhHHHHHHH-----hCCcEEecccCcccccC
Q 025707 162 LSEA------SPDTIRRAHAV---HPITAVQLEWSLWARDIENEIVPLCRE-----LGIGIVPYCPLGRGFFG 220 (249)
Q Consensus 162 vs~~------~~~~l~~~~~~---~~~~~~q~~~n~~~~~~~~~~~~~~~~-----~gi~v~a~spl~~G~l~ 220 (249)
+|.| +.+.+...+.. .+.+++=+-..+-+......++++..+ .+.++++++.=..|.++
T Consensus 144 ~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG~~G~~S 216 (258)
T 4h3d_A 144 ISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVIS 216 (258)
T ss_dssp EEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECTGGGGGG
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChHH
Confidence 3433 33444333222 334444443333333222344544432 26777766554445433
No 152
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=65.06 E-value=64 Score=27.47 Aligned_cols=121 Identities=12% Similarity=0.122 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHHcC---CCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKG---ITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~G---i~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
+.+...++++...+.- +-.+|.+..-+ .-...+-+.+. ...-++|.+|...... ....+.+.+.+.
T Consensus 57 ~~e~f~~~L~~~~~~~~lil~VvD~~d~~~--s~~~~l~~~l~--~~piilV~NK~DLl~~-------~~~~~~~~~~l~ 125 (369)
T 3ec1_A 57 DDDDFLSMLHRIGESKALVVNIVDIFDFNG--SFIPGLPRFAA--DNPILLVGNKADLLPR-------SVKYPKLLRWMR 125 (369)
T ss_dssp --CHHHHHHHHHHHHCCEEEEEEETTCSGG--GCCSSHHHHCT--TSCEEEEEECGGGSCT-------TCCHHHHHHHHH
T ss_pred CHHHHHHHHHHhhccCcEEEEEEECCCCCC--chhhHHHHHhC--CCCEEEEEEChhcCCC-------ccCHHHHHHHHH
Confidence 4566777787775432 34568775443 11112233332 4567788899875431 233566777777
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHH
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 172 (249)
+.++.+|....+++.+-. .....++++++.+.++.+...|--+|-+|..-+.+..
T Consensus 126 ~~~~~~g~~~~~v~~iSA-~~g~gi~~L~~~I~~~~~~~~i~~vG~~nvGKStliN 180 (369)
T 3ec1_A 126 RMAEELGLCPVDVCLVSA-AKGIGMAKVMEAINRYREGGDVYVVGCTNVGKSTFIN 180 (369)
T ss_dssp HHHHTTTCCCSEEEECBT-TTTBTHHHHHHHHHHHHTTSCEEEECCTTSSHHHHHH
T ss_pred HHHHHcCCCcccEEEEEC-CCCCCHHHHHHHHHhhcccCcEEEEcCCCCchHHHHH
Confidence 778888875456665533 3346688999999998888899999999988765443
No 153
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=64.80 E-value=52 Score=28.52 Aligned_cols=85 Identities=9% Similarity=-0.053 Sum_probs=59.1
Q ss_pred EeecCCCCCCHHHHHHHHHHHHHc-----CCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhHHHHHHH
Q 025707 131 YQHRVDTSVPIEETIGEMKKLVEE-----GKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIVPLCRE 203 (249)
Q Consensus 131 ~lh~~~~~~~~~~~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~ 203 (249)
++..|-......+-++.+.+|.++ -.| -..|=+.++.+.+.++++....+++|+..+-+-.- ...++.+.|++
T Consensus 271 ~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~ 350 (413)
T 1kcz_A 271 RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKA 350 (413)
T ss_dssp EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHH
T ss_pred EEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 566664322245567777777776 233 34455678889999998888889999987765321 12789999999
Q ss_pred hCCcEEecc-cCc
Q 025707 204 LGIGIVPYC-PLG 215 (249)
Q Consensus 204 ~gi~v~a~s-pl~ 215 (249)
+|+.++..+ .+.
T Consensus 351 ~gi~~~~~~~~~e 363 (413)
T 1kcz_A 351 NGMGAYCGGTCNE 363 (413)
T ss_dssp TTCEEEECCCTTS
T ss_pred cCCEEEecCCCCC
Confidence 999999865 443
No 154
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=64.59 E-value=69 Score=27.58 Aligned_cols=153 Identities=12% Similarity=0.132 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC--------chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPY--------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g--------~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i 111 (249)
+++.+.++.+.+.+.|++.|-.--....+ ...+.+ +++++.-.+++-|.-.... .++++..
T Consensus 147 ~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~d~~~~~~~~~~~v-~avReavG~d~~l~vDaN~----------~~~~~~A 215 (388)
T 3tcs_A 147 PRDEAERLKRLRDTQGFTAFKVRAGAEVGRNRDEWPGRTEEII-PTMRRELGDDVDLLIDANS----------CYTPDRA 215 (388)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEECSCTTCTTCCSSTTHHHHHH-HHHHHHHCSSSEEEEECTT----------CCCHHHH
T ss_pred hHHHHHHHHHHHHhcCCCEEEEccCCCcccccccchhHHHHHH-HHHHHHhCCCCeEEEeCCC----------CcCHHHH
Confidence 34555555555568899999653321111 112333 4455422234444444321 2455544
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccc
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (249)
.+ +-+.|+.+++. ++..|-...+ ++.+.++++.-.|. ..|=+.++...+.++++...++++|+..+-.-
T Consensus 216 ~~-~~~~l~~~~i~-----~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~G 285 (388)
T 3tcs_A 216 IE-VGHMLQDHGFC-----HFEEPCPYWE----LAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLG 285 (388)
T ss_dssp HH-HHHHHHHTTCC-----EEECCSCTTC----HHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHT
T ss_pred HH-HHHHHhhcCCe-----EEECCCCccC----HHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccC
Confidence 33 33456677654 4455543333 45667777654443 44567788999999988888899998765432
Q ss_pred c-chhhhHHHHHHHhCCcEEeccc
Q 025707 191 R-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 191 ~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
. ....++.+.|+++|+.+...+.
T Consensus 286 Git~a~kia~~A~~~gv~~~~h~~ 309 (388)
T 3tcs_A 286 GICRTLRVVEMARAAGLPVTPHCA 309 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEecCC
Confidence 2 1127899999999999987765
No 155
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=63.56 E-value=14 Score=30.75 Aligned_cols=103 Identities=12% Similarity=-0.013 Sum_probs=58.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
.+.+... .+-+.|.++|+++|++-....|.......+.++.++.+++...++..++. .+...++.+.+. .++.+.+.
T Consensus 24 ~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~a-g~~~v~i~ 100 (298)
T 2cw6_A 24 VSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAA-GAKEVVIF 100 (298)
T ss_dssp CCHHHHH-HHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHT-TCSEEEEE
T ss_pred CCHHHHH-HHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHC-CCCEEEEE
Confidence 4455443 56677889999999998765553221112223333334333334444444 567778887775 34455543
Q ss_pred cCcccc--------c------hhhhHHHHHHHhCCcEEec
Q 025707 186 WSLWAR--------D------IENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 186 ~n~~~~--------~------~~~~~~~~~~~~gi~v~a~ 211 (249)
.+.-+. . ...+.+++|+++|+.|..+
T Consensus 101 ~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 101 GAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 332211 0 1156799999999998743
No 156
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=62.65 E-value=64 Score=28.12 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=65.1
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcC-CCCHHHHHHHhhcCCceEEee
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLS-EASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs-~~~~~~l~~~~~~~~~~~~q~ 184 (249)
+++...+-+.+.|+.+ ++.++..|-...+ ++.+.+|.++-.|.-. |=+ ..+...+.++++....+++|+
T Consensus 268 ~~~~ai~~~~~~l~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 338 (427)
T 2pa6_A 268 TREELLDYYKALVDEY-----PIVSIEDPFHEED----FEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLL 338 (427)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHHhhC-----CCcEEEcCCChhh----HHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEE
Confidence 5665555556666665 5688888865544 4566666666554333 223 234889999988888899999
Q ss_pred ecCcccc-chhhhHHHHHHHhCCcEEe-ccc
Q 025707 185 EWSLWAR-DIENEIVPLCRELGIGIVP-YCP 213 (249)
Q Consensus 185 ~~n~~~~-~~~~~~~~~~~~~gi~v~a-~sp 213 (249)
..+-.-. ....++.+.|+++|+.++. ...
T Consensus 339 k~~~~GGitea~~ia~lA~~~g~~~~~~h~~ 369 (427)
T 2pa6_A 339 KVNQIGTLSEAVDAAQLAFRNGYGVVVSHRS 369 (427)
T ss_dssp CHHHHCSHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred cccccCCHHHHHHHHHHHHHcCCeEEEeCCC
Confidence 7665422 1126899999999999876 433
No 157
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=62.32 E-value=34 Score=28.56 Aligned_cols=99 Identities=10% Similarity=0.067 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEee-cCCC-CCCH----HHHHHHHHHHHHc-CCeeEEEcCCCCHHHHHHHhhcCCce
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQH-RVDT-SVPI----EETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPIT 180 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh-~~~~-~~~~----~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (249)
.+.+.+..++.+ .-|.|.||+-.-- +|.. ..+. +.+...++.++++ +. -|.+-+++++.++++++... +
T Consensus 62 ~~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa-~ 137 (297)
T 1tx2_A 62 VDAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGA-H 137 (297)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTC-C
T ss_pred HHHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCC-C
Confidence 344555454444 5789999988643 2321 2222 3344445666654 43 47888999999999988733 2
Q ss_pred EEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 181 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
++ +..|.... ..++++.+++.|.+++.+..
T Consensus 138 iI-Ndvsg~~~--d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 138 II-NDIWGAKA--EPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp EE-EETTTTSS--CTHHHHHHHHHTCCEEEECC
T ss_pred EE-EECCCCCC--CHHHHHHHHHhCCcEEEEeC
Confidence 22 33444332 35788999999999888764
No 158
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=61.87 E-value=65 Score=26.35 Aligned_cols=105 Identities=16% Similarity=0.145 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CCeeEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
+.+.+.+..++.. .-|.|.||+-.-- ...+..+.+...++.+++. +. -|.+-+++++.++++++..+=..+-+.
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s--~~~eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v~~aal~a~~Ga~iINd 106 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGP--TADDPVRVMEWLVKTIQEVVDL--PCCLDSTNPDAIEAGLKVHRGHAMINS 106 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCS--CSSCHHHHHHHHHHHHHHHCCC--CEEEECSCHHHHHHHHHHCCSCCEEEE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCc--CchhHHHHHHHHHHHHHHhCCC--eEEEeCCCHHHHHHHHHhCCCCCEEEE
Confidence 4455555555554 6899999988754 2234466666666666665 33 477888999999999887211112222
Q ss_pred cCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 186 WSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 186 ~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
.|... ..-.++++.|++.|.+++.+..-.+|
T Consensus 107 vs~~~-d~~~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 107 TSADQ-WKMDIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp ECSCH-HHHHHHHHHHHHHTCEEEEESCBTTB
T ss_pred CCCCc-cccHHHHHHHHHcCCCEEEEecCCCC
Confidence 33332 11167999999999999998753334
No 159
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=59.86 E-value=59 Score=28.78 Aligned_cols=128 Identities=13% Similarity=0.053 Sum_probs=78.5
Q ss_pred HHHHHHcC---CCCCeEEEeccccc--cc-CCcccc-----cCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHH
Q 025707 74 LGKALKEL---PRENIQVATKFGFV--EL-GFTSVI-----VKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIE 142 (249)
Q Consensus 74 lg~~l~~~---~r~~~~I~tK~~~~--~~-~~~~~~-----~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~ 142 (249)
+-+++++. +-+++.|.--.... +. ..+... ..++++...+-+++.|+.+ +++++..|-...+
T Consensus 246 i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y-----~i~~IEdPl~~dD-- 318 (449)
T 3uj2_A 246 ILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERY-----PIVSIEDGLDEED-- 318 (449)
T ss_dssp HHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHS-----CEEEEESCSCTTC--
T ss_pred HHHHHHHhccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhc-----CceEEECCCCcch--
Confidence 34677664 56678777655321 00 000000 1235666666666667765 4788888866554
Q ss_pred HHHHHHHHHHHc-C-CeeEEEcCCC--CHHHHHHHhhcCCceEEeeecCccccc-hhhhHHHHHHHhCCcEEe
Q 025707 143 ETIGEMKKLVEE-G-KIKYIGLSEA--SPDTIRRAHAVHPITAVQLEWSLWARD-IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 143 ~~~~~l~~l~~~-G-~ir~iGvs~~--~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a 210 (249)
|+.+.+|.+. | .|.-+|=-.+ ++..+.++++....+++|+..|-.-.- ...++.+.|+++|+.++.
T Consensus 319 --~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v 389 (449)
T 3uj2_A 319 --WEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVV 389 (449)
T ss_dssp --HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred --HHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 4445555544 2 4555554333 689999999888889999977654321 127899999999999554
No 160
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=59.50 E-value=9.7 Score=23.50 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeE
Q 025707 139 VPIEETIGEMKKLVEEGKIKY 159 (249)
Q Consensus 139 ~~~~~~~~~l~~l~~~G~ir~ 159 (249)
.+.+++++.|.+|.++|.|+-
T Consensus 37 V~kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 37 VEKQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp CCHHHHHHHHHHHHHTTSEEE
T ss_pred CCHHHHHHHHHHHHHCCCeec
Confidence 457899999999999999974
No 161
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=57.23 E-value=1e+02 Score=27.07 Aligned_cols=129 Identities=15% Similarity=0.100 Sum_probs=80.4
Q ss_pred HHHHHHcC---CCCCeEEEecccccccC-Cccc---ccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHH
Q 025707 74 LGKALKEL---PRENIQVATKFGFVELG-FTSV---IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIG 146 (249)
Q Consensus 74 lg~~l~~~---~r~~~~I~tK~~~~~~~-~~~~---~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~ 146 (249)
+-+++++. +-+++.|.--....... .+.. ...++++...+-+++.|+.++ ++++..|-...+ |+
T Consensus 224 i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~-----i~~IEdPl~~dD----~e 294 (428)
T 3tqp_A 224 ILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYP-----VISIEDGLSEND----WA 294 (428)
T ss_dssp HHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSC-----EEEEECCSCTTC----HH
T ss_pred HHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcc-----cceEeCCCCccc----HH
Confidence 35677764 55777777655210000 0000 123577777777777777664 688888866554 34
Q ss_pred HHHHHHHc-C-CeeEEEcC--CCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEec
Q 025707 147 EMKKLVEE-G-KIKYIGLS--EASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 147 ~l~~l~~~-G-~ir~iGvs--~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~ 211 (249)
.+.+|.++ + .|.-+|=- ..++..+.++++....+++|+..|-.-. ....++.+.|+++|+.++..
T Consensus 295 g~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~ 364 (428)
T 3tqp_A 295 GWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIIS 364 (428)
T ss_dssp HHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 44455443 2 35445643 3488999999988888899997765432 11278999999999995543
No 162
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=56.54 E-value=88 Score=26.22 Aligned_cols=95 Identities=7% Similarity=-0.073 Sum_probs=54.9
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
++-|.-|+....... ...+.+.. ..+-+.|+..|+|+|++.--..... ...-...++.+.++++.=.+--|+.
T Consensus 209 ~~pv~vris~~~~~~----~g~~~~~~-~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~ 283 (338)
T 1z41_A 209 DGPLFVRVSASDYTD----KGLDIADH-IGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAV 283 (338)
T ss_dssp CSCEEEEEECCCCST----TSCCHHHH-HHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEEC
T ss_pred CCcEEEEecCcccCC----CCCCHHHH-HHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEE
Confidence 455667776532111 12344433 3455667889988877743211111 0111112455556665546777888
Q ss_pred CCC-CHHHHHHHhhcCCceEEee
Q 025707 163 SEA-SPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 163 s~~-~~~~l~~~~~~~~~~~~q~ 184 (249)
... +++..+++++....+.+++
T Consensus 284 Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 284 GMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp SSCCSHHHHHHHHHTTSCSEEEE
T ss_pred CCCCCHHHHHHHHHcCCceEEee
Confidence 776 7899999998877888877
No 163
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=56.16 E-value=1.2e+02 Score=28.01 Aligned_cols=134 Identities=10% Similarity=0.042 Sum_probs=74.8
Q ss_pred HHHHHHHHHHcCCCeEeC--CC-----------------CcCCCchHHH---HHHH---HHcCCCCCeEEEecccccccC
Q 025707 44 GISIIKHAFSKGITFFDT--AD-----------------KYGPYTNEIL---LGKA---LKELPRENIQVATKFGFVELG 98 (249)
Q Consensus 44 ~~~~l~~A~~~Gi~~~Dt--a~-----------------~Yg~g~se~~---lg~~---l~~~~r~~~~I~tK~~~~~~~ 98 (249)
..+..+.|.++|+..++. +. .|| |.-|.. +-+. +++.-.+++.|.-|+......
T Consensus 143 ~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yG-gs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~ 221 (671)
T 1ps9_A 143 FARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWG-GDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV 221 (671)
T ss_dssp HHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCC-CcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC
Confidence 344455667899999985 22 244 222322 2222 222223467777888754311
Q ss_pred CcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-------CCHHHHHHHHHHHHHcCCeeEEEcCCC-CHHHH
Q 025707 99 FTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKIKYIGLSEA-SPDTI 170 (249)
Q Consensus 99 ~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~~l 170 (249)
....+.+... .+-+.|+..|+||+++-. .+.+.. ......++.+.++++.=.+--++.... +++..
T Consensus 222 ----~~g~~~~~~~-~~a~~l~~~g~d~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a 295 (671)
T 1ps9_A 222 ----EDGGTFAETV-ELAQAIEAAGATIINTGI-GWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVA 295 (671)
T ss_dssp ----TTCCCHHHHH-HHHHHHHHHTCSEEEEEE-CBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHH
T ss_pred ----CCCCCHHHHH-HHHHHHHhcCCCEEEcCC-CccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHH
Confidence 0123444432 345667889998887532 111110 111123556677777666777888775 78888
Q ss_pred HHHhhcCCceEEee
Q 025707 171 RRAHAVHPITAVQL 184 (249)
Q Consensus 171 ~~~~~~~~~~~~q~ 184 (249)
+++++....+.+++
T Consensus 296 ~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 296 DDILSRGDADMVSM 309 (671)
T ss_dssp HHHHHTTSCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 88888766777666
No 164
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=55.45 E-value=89 Score=25.91 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=58.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCC----CchHHHHHHHHHcC-CCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGP----YTNEILLGKALKEL-PRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~----g~se~~lg~~l~~~-~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
++.++..++++.+.+.|++.|.-+. |. ..-.+ +-+.+++. .-..+.|+|.... +.+
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~~tG--GEPll~~~l~~-li~~~~~~~~~~~i~i~TNG~l----------------l~~ 110 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIRITG--GEPLMRRDLDV-LIAKLNQIDGIEDIGLTTNGLL----------------LKK 110 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEES--SCGGGSTTHHH-HHHHHTTCTTCCEEEEEECSTT----------------HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC--CCccchhhHHH-HHHHHHhCCCCCeEEEEeCccc----------------hHH
Confidence 6789999999999999998886542 21 11222 22233322 1126777775321 112
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCC--------C-CHHHHHHHHHHHHHcCC
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTS--------V-PIEETIGEMKKLVEEGK 156 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~--------~-~~~~~~~~l~~l~~~G~ 156 (249)
.-+.|...|++++. +.++..++. . ..+.+++.++.+++.|.
T Consensus 111 -~~~~L~~~g~~~v~-iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~ 160 (340)
T 1tv8_A 111 -HGQKLYDAGLRRIN-VSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL 160 (340)
T ss_dssp -HHHHHHHHTCCEEE-EECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHCCCCEEE-EecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC
Confidence 23445666776654 344444321 2 57889999999999986
No 165
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=55.44 E-value=94 Score=26.22 Aligned_cols=140 Identities=14% Similarity=0.134 Sum_probs=77.2
Q ss_pred CCHHHHHHHHH-------HHHHcCCCeEeC--CC-----------------CcCCCchHH---HHH---HHHHcCCCCCe
Q 025707 39 LSEEDGISIIK-------HAFSKGITFFDT--AD-----------------KYGPYTNEI---LLG---KALKELPRENI 86 (249)
Q Consensus 39 ~~~~~~~~~l~-------~A~~~Gi~~~Dt--a~-----------------~Yg~g~se~---~lg---~~l~~~~r~~~ 86 (249)
++.++..++++ .|.++|+..++- +. .|| |.-|. .+- +++++.-.+++
T Consensus 142 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 142 LDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYG-GSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCC-cCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 56777666654 567899999873 22 344 23232 122 23333223455
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEe-ecCCCC--CCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQ-HRVDTS--VPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~l-h~~~~~--~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
-|.-|+....... ...+.+.. ..+-+.|+..|+|+|++-.= ..+... ..-...++.+.++++.-.+--|+..
T Consensus 221 pV~vRls~~~~~~----~g~~~~~~-~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~G 295 (349)
T 3hgj_A 221 PLFVRVSATDWGE----GGWSLEDT-LAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVG 295 (349)
T ss_dssp CEEEEEESCCCST----TSCCHHHH-HHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECS
T ss_pred eEEEEeccccccC----CCCCHHHH-HHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEEC
Confidence 5667876543111 12344443 34556678889888776530 111100 0011134455666665456667776
Q ss_pred C-CCHHHHHHHhhcCCceEEee
Q 025707 164 E-ASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 164 ~-~~~~~l~~~~~~~~~~~~q~ 184 (249)
. ++++..+++++....+.+++
T Consensus 296 gi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 296 LITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp SCCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCHHHHHHHHHCCCceEEEe
Confidence 6 47889999888877887777
No 166
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=55.27 E-value=52 Score=26.55 Aligned_cols=145 Identities=12% Similarity=0.006 Sum_probs=77.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc----CCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
+.+.+.++++.|++.|+...+. -+..+..+++. ..++++++.--. ...+.+++.+
T Consensus 51 d~~~~~~~~~~al~~g~~~~~i--------~~~~l~p~l~~vG~~w~~g~~~v~~~~-------------~~~~~~~~~l 109 (258)
T 2i2x_B 51 EEDDVVEGLQAAIEAGKDPIDL--------IDDALMVGMGVVIRLYDEGVIFLPNVM-------------MSADAMLEGI 109 (258)
T ss_dssp CHHHHHHHHHHHHHHSCCTTTH--------HHHTHHHHHHHHHHHHHTTSSCHHHHH-------------HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCHHHH--------HHHHHHHHHHHHHHHHhCCCCcHHHHH-------------HHHHHHHHHH
Confidence 6888999999999888654332 22333333332 123333332211 1233344444
Q ss_pred HHHHHHcCCC--ceeEEEeecCCCC-CCHHHHHHHHHHHHHcCC-eeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc
Q 025707 116 EASLRRLDVE--YIDLYYQHRVDTS-VPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (249)
Q Consensus 116 ~~sL~~Lg~d--~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (249)
+.....+... .---+++..+..+ .++.. .-.-.-|...|. |.++|.. .+++.+.++.....++++-+.+.....
T Consensus 110 ~~l~~~~~~~~~~~~~vlla~~~gd~HdiG~-~iva~~L~~~G~~Vi~LG~~-vp~e~l~~~~~~~~~d~V~lS~l~~~~ 187 (258)
T 2i2x_B 110 EYCKENSGATPKTKGTVVCHVAEGDVHDIGK-NIVTALLRANGYNVVDLGRD-VPAEEVLAAVQKEKPIMLTGTALMTTT 187 (258)
T ss_dssp HHHHTTTSSCCCCSCEEEEEECTTCCCCHHH-HHHHHHHHHTTCEEEEEEEE-CCSHHHHHHHHHHCCSEEEEECCCTTT
T ss_pred HHHHHhhccccCCCCeEEEEeCCCCccHHHH-HHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEEeeccCC
Confidence 4433444321 1112444444433 44433 222235678887 6799997 466777666666666777766544322
Q ss_pred c-hhhhHHHHHHHhCCc
Q 025707 192 D-IENEIVPLCRELGIG 207 (249)
Q Consensus 192 ~-~~~~~~~~~~~~gi~ 207 (249)
. ....+++.+++.|..
T Consensus 188 ~~~~~~~i~~l~~~~~~ 204 (258)
T 2i2x_B 188 MYAFKEVNDMLLENGIK 204 (258)
T ss_dssp TTHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 2 227788899888754
No 167
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=59.10 E-value=2.7 Score=28.50 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=35.3
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccC
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCF 237 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~ 237 (249)
..+++.++++||+|+-..||+.-+...-...+.+|++.+....
T Consensus 30 ~~I~e~A~e~~VPi~e~~~LAr~Ly~~~~ig~~IP~ely~aVA 72 (87)
T 3b1s_B 30 QKIVEIAENYSIPVVRKPELARALYPAVEVGKEISPKFYKAVA 72 (87)
Confidence 7799999999999999999999887444455678887777653
No 168
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=53.57 E-value=88 Score=25.35 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=62.7
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHH-HHHHHHcCCeeEEEcC-------CCCHHHHHHHhhcCCceEEee
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGE-MKKLVEEGKIKYIGLS-------EASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~-l~~l~~~G~ir~iGvs-------~~~~~~l~~~~~~~~~~~~q~ 184 (249)
+.+++.|+-.| +|||.+=+-|-.....-+++++. ++-+++.|.--+.|=+ ....++..+.+....|+++.+
T Consensus 26 ~~~~d~Le~~g-~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEi 104 (251)
T 1qwg_A 26 KFVEDYLKVCG-DYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEI 104 (251)
T ss_dssp HHHHHHHHHHG-GGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhh-hhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEE
Confidence 55788888999 79999999987665544444444 4444555554444431 123444444445567888888
Q ss_pred ecCccccch--hhhHHHHHHHhCCcEEe
Q 025707 185 EWSLWARDI--ENEIVPLCRELGIGIVP 210 (249)
Q Consensus 185 ~~n~~~~~~--~~~~~~~~~~~gi~v~a 210 (249)
.-..+.-.. ...+++.+++.|..|+.
T Consensus 105 S~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 105 SDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 655544322 27799999999998864
No 169
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=53.14 E-value=31 Score=30.44 Aligned_cols=60 Identities=13% Similarity=0.216 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEee-cCCCC-----------CCHHH---HH-HHHHHHHHcCCeeEEEcCCCCH
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQH-RVDTS-----------VPIEE---TI-GEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh-~~~~~-----------~~~~~---~~-~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
-+.+.+.+.++... .|+.+++-++.+. .|... .+.++ .+ ...+.|.+.| ...+++|+|..
T Consensus 217 et~e~~~~tl~~~~-~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~G-y~~yeis~fa~ 292 (457)
T 1olt_A 217 QTPESFAFTLKRVA-ELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG-YQFIGMDHFAR 292 (457)
T ss_dssp CCHHHHHHHHHHHH-HHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTT-CEEEETTEEEC
T ss_pred CCHHHHHHHHHHHH-hcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCC-CeEEEechhcC
Confidence 46777878777654 6899999988775 23211 11222 22 3345566666 47889988643
No 170
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=53.14 E-value=80 Score=26.50 Aligned_cols=105 Identities=9% Similarity=0.128 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCC-HHH--HHHHHHHHHHcCCeeEEEcC---CCCHHHHHHHhh--cC
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP-IEE--TIGEMKKLVEEGKIKYIGLS---EASPDTIRRAHA--VH 177 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~-~~~--~~~~l~~l~~~G~ir~iGvs---~~~~~~l~~~~~--~~ 177 (249)
.+.+. ...+-+.|.++|+++|.+-...+|..... .-. -|+.|+.+++...++.-.+. |..++.+..+.. ..
T Consensus 21 ~~~~~-k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~~ 99 (320)
T 3dxi_A 21 FNSKI-VDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPIIG 99 (320)
T ss_dssp CCHHH-HHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGTT
T ss_pred CCHHH-HHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhhc
Confidence 44443 44566678899999999998865543211 100 14555555444445555553 222233433321 15
Q ss_pred CceEEeeecCccccchhhhHHHHHHHhCCcEEec
Q 025707 178 PITAVQLEWSLWARDIENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 178 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~ 211 (249)
+++.+.+..++-+-....+.+++++++|+.|...
T Consensus 100 Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 100 LVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp TCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 5666666544432222367888899999988764
No 171
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=52.70 E-value=13 Score=31.46 Aligned_cols=85 Identities=9% Similarity=-0.087 Sum_probs=55.0
Q ss_pred eeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhC
Q 025707 127 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELG 205 (249)
Q Consensus 127 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~g 205 (249)
.++.++..|-...++ +.+.+ .+.+.=-..|=|.++...+.++++...++++|+.....-. ....++.+.|+++|
T Consensus 191 ~~i~~iEqP~~~~d~----~~~~~-~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~g 265 (342)
T 2okt_A 191 EQVLYIEEPFKDISM----LDEVA-DGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHG 265 (342)
T ss_dssp GCEEEEECCCSSGGG----GGGSC-TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTT
T ss_pred CCCcEEECCCCCccH----HHHHH-hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCC
Confidence 356667666443322 22222 2223333556677889999998888888999997654322 11268999999999
Q ss_pred CcEEecccCcc
Q 025707 206 IGIVPYCPLGR 216 (249)
Q Consensus 206 i~v~a~spl~~ 216 (249)
+.++..+.+..
T Consensus 266 i~~~~~~~~es 276 (342)
T 2okt_A 266 AKVVIGGMYEY 276 (342)
T ss_dssp CEEEEBCSSCC
T ss_pred CEEEEcCCccc
Confidence 99998876544
No 172
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=52.20 E-value=1e+02 Score=25.56 Aligned_cols=119 Identities=15% Similarity=0.180 Sum_probs=65.8
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
.+.++..+.++.+.+.|++.|-....-..-..-+.+.+.++.+....+.|.+-.+. .+++.+ +.
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~-----------l~~e~l-----~~ 147 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE-----------WPREYY-----EK 147 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC-----------CCHHHH-----HH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCC-----------CCHHHH-----HH
Confidence 47899999999999999987754311100011134444444422225666543221 233333 33
Q ss_pred HHHcCCCceeEEEeecCCC--------CCCHHHHHHHHHHHHHcCCeeE----EEcCCCCHHHHHHHh
Q 025707 119 LRRLDVEYIDLYYQHRVDT--------SVPIEETIGEMKKLVEEGKIKY----IGLSEASPDTIRRAH 174 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~--------~~~~~~~~~~l~~l~~~G~ir~----iGvs~~~~~~l~~~~ 174 (249)
|...|++.+- +-++..++ ....++.+++++.+++.|.--. +|+.+.+.+.+.+.+
T Consensus 148 L~~ag~~~v~-i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~ 214 (348)
T 3iix_A 148 WKEAGADRYL-LRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDL 214 (348)
T ss_dssp HHHHTCCEEE-CCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHH
T ss_pred HHHhCCCEEe-eeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHH
Confidence 4456766544 23333321 2357889999999999986322 233355666655543
No 173
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=52.04 E-value=1.1e+02 Score=26.18 Aligned_cols=147 Identities=15% Similarity=0.129 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcC----C----CchHHHHHHHHHc--CCCCCeEEEecccccccCCcccccCCCHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYG----P----YTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg----~----g~se~~lg~~l~~--~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i 111 (249)
++..+..+.+++.|++.|=.--... + -..+...-+++++ .+.-++.+=.. ..++++..
T Consensus 150 e~~~~~a~~~~~~Gf~~~KlKvg~~~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN------------~~w~~~~A 217 (392)
T 3v5c_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDAN------------NAYNLNLT 217 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCTTTTTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECT------------TCCCHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCccccccccHHHHHHHHHHHHHHcCCCCcEEeeCC------------CCcCHHHH
Confidence 4455666677799999986432111 0 0112222344544 23323333111 12444433
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH------cCCeeEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE------EGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~------~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
.+.+++|. .+++.++..|-. .+ ++.+.++++ .+.--+.|-+.+ ...+.++++...++++|+.
T Consensus 218 ----~~~~~~L~--~~~l~~iEeP~~-~d----~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~d 285 (392)
T 3v5c_A 218 ----KEVLAALS--DVNLYWLEAAFH-ED----EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp ----HHHHHHTT--TSCCCEEECSSS-CC----HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECCB
T ss_pred ----HHHHHhcc--cCCCeEEeCCCC-cC----HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEeC
Confidence 23444553 357788888755 33 234444544 244456667777 6678888888889999998
Q ss_pred cCcccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 186 WSLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 186 ~n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
.+- -. ....++.+.|+++|+.+...++
T Consensus 286 ~~~-GGitea~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 286 IIW-PGFTHWMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp TTT-BCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CCC-CCHHHHHHHHHHHHHcCCeEEecCC
Confidence 764 21 1126799999999999987664
No 174
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=52.01 E-value=42 Score=29.23 Aligned_cols=68 Identities=15% Similarity=-0.004 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCe---eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEecc
Q 025707 145 IGEMKKLVEEGKI---KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 145 ~~~l~~l~~~G~i---r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~s 212 (249)
++.+.+++++-.+ -..|=+.++...+.++++...++++|+..+-.-. ....++.+.|+++|+.+...+
T Consensus 250 ~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~~h~ 321 (404)
T 3ekg_A 250 YWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVVPHG 321 (404)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEEecC
Confidence 5556666665433 2567778888888888888888999997665432 112779999999999998654
No 175
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=51.98 E-value=30 Score=26.76 Aligned_cols=69 Identities=10% Similarity=0.041 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHHc-CCeeEEEcCCCCH--HHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 140 PIEETIGEMKKLVEE-GKIKYIGLSEASP--DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 140 ~~~~~~~~l~~l~~~-G~ir~iGvs~~~~--~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
..-+++++|.++++. ++|.-||..|... +.+..++ .+++.+..|+-.+. ....++.+++.|+.++.-..
T Consensus 79 s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll---~~~i~~~~~~~~~e--~~~~i~~l~~~G~~vvVG~~ 150 (196)
T 2q5c_A 79 TRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAML---GVKIKEFLFSSEDE--ITTLISKVKTENIKIVVSGK 150 (196)
T ss_dssp CHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHH---TCEEEEEEECSGGG--HHHHHHHHHHTTCCEEEECH
T ss_pred CHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHh---CCceEEEEeCCHHH--HHHHHHHHHHCCCeEEECCH
Confidence 366889999999876 6688888887643 3444444 45566655543322 37799999999999876443
No 176
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=51.19 E-value=41 Score=26.39 Aligned_cols=147 Identities=14% Similarity=0.156 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-cCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK-YGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~-Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+++.+.++++.|++.|+...|.-.. .. ..-..+|+-+. ++++++..=. .+.+.+++.++..
T Consensus 17 d~~~~~~~~~~al~~g~~~~~ii~~~l~--p~m~~VG~lw~---~g~i~v~q~~-------------~aa~~~~~~l~~l 78 (215)
T 3ezx_A 17 NVAGTPELCKEALAAGVPALDIITKGLS--VGMKIVGDKFE---AAEIFLPQIM-------------MSGKAMSNAMEVL 78 (215)
T ss_dssp CTTHHHHHHHHHHHTTCCHHHHHHHTHH--HHHHHHHHHHH---TTSSCHHHHH-------------HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHHH--HHHHHHHHHHh---CCCCcHHHHH-------------HHHHHHHHHHHHH
Confidence 6788999999999999865553211 00 23444444443 3333332211 1233444444444
Q ss_pred HHHcCC-----CceeEEEeecCCCC-CCHHHHHHHHHHHHHcCC-eeEEEcCCCCHHHHHHHhhcCCceEEee--ecCcc
Q 025707 119 LRRLDV-----EYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQL--EWSLW 189 (249)
Q Consensus 119 L~~Lg~-----d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~--~~n~~ 189 (249)
...+.. ..---+++..+..+ .++...+ .-.-|...|. |-++|. +.+++.+.++.....++++-+ .....
T Consensus 79 ~~~l~~~~~~~~~~~~vll~~v~gd~HdiG~~i-v~~~l~~~G~~Vi~LG~-~vp~e~iv~~~~~~~~d~v~l~~S~l~~ 156 (215)
T 3ezx_A 79 TPELEKNKKEGEEAGLAITFVAEGDIHDIGHRL-VTTMLGANGFQIVDLGV-DVLNENVVEEAAKHKGEKVLLVGSALMT 156 (215)
T ss_dssp HHHHTSSCCC---CCEEEEEECTTCCCCHHHHH-HHHHHHHTSCEEEECCS-SCCHHHHHHHHHHTTTSCEEEEEECSSH
T ss_pred HHHhhhcccCCCCCCeEEEEeCCCChhHHHHHH-HHHHHHHCCCeEEEcCC-CCCHHHHHHHHHHcCCCEEEEEchhccc
Confidence 334432 12234555555544 4443322 2246777885 678888 456677766666667777777 44333
Q ss_pred ccch-hhhHHHHHHHhCC
Q 025707 190 ARDI-ENEIVPLCRELGI 206 (249)
Q Consensus 190 ~~~~-~~~~~~~~~~~gi 206 (249)
.... -.++++.+++.|.
T Consensus 157 ~~~~~~~~~i~~l~~~~~ 174 (215)
T 3ezx_A 157 TSMLGQKDLMDRLNEEKL 174 (215)
T ss_dssp HHHTHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHcCC
Confidence 2211 2778999999875
No 177
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=51.13 E-value=91 Score=27.12 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=53.7
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHHHcCC--e-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhHHHHHHH
Q 025707 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGK--I-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIVPLCRE 203 (249)
Q Consensus 128 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~--i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~ 203 (249)
++.++..|-...+ ++.+.+|.++-. | -..|=+.++...+.++++.. ++++|+..+-+-.- ...++.+.|++
T Consensus 249 ~i~~iEqPl~~~d----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d~i~ik~~~~GGitea~~ia~lA~~ 323 (415)
T 2p3z_A 249 NLKWIEECLPPQQ----YEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-IDIMQPDVGWCGGLTTLVEIAALAKS 323 (415)
T ss_dssp TCCEEECCSCTTC----HHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CSEECCCHHHHTCHHHHHHHHHHHHH
T ss_pred CCceEeCCCCcch----HHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHH
Confidence 4456666644333 455556655422 2 23355667888999988888 99999876654221 12789999999
Q ss_pred hCCcEEeccc
Q 025707 204 LGIGIVPYCP 213 (249)
Q Consensus 204 ~gi~v~a~sp 213 (249)
+|+.++..+.
T Consensus 324 ~gi~v~~h~~ 333 (415)
T 2p3z_A 324 RGQLVVPHGS 333 (415)
T ss_dssp TTCCBCCCCC
T ss_pred cCCEEEecCh
Confidence 9999887654
No 178
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=51.02 E-value=83 Score=24.75 Aligned_cols=112 Identities=14% Similarity=0.114 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCCeeEEEcCCCCH--HHHHHHhhcCCceEEe
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYIGLSEASP--DTIRRAHAVHPITAVQ 183 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~--~~l~~~~~~~~~~~~q 183 (249)
...+...+.+.+++.+++. +-+.+.-.+. ..+...+.+.+++|++.|. .|.+.+|.. ..+..+ ...+++.+=
T Consensus 108 ~~~~~~~l~~~l~~~~~~~-~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~--~ialDdfG~g~s~l~~L-~~l~~d~iK 183 (250)
T 4f3h_A 108 DPQMIDTIREQLAVYGVPG-ERLWLQTPESKVFTHLRNAQQFLASVSAMGC--KVGLEQFGSGLDSFQLL-AHFQPAFLK 183 (250)
T ss_dssp CHHHHHHHHHHHHHTTCCG-GGEEEEEEHHHHHHSHHHHHHHHHHHHTTTC--EEEEEEETSSTHHHHHH-TTSCCSEEE
T ss_pred CcHHHHHHHHHHHHcCCCc-ceEEEEEechhhhcCHHHHHHHHHHHHHCCC--EEEEeCCCCCchHHHHH-hhCCCCEEE
Confidence 3456778899999988753 2222322211 1345678899999999998 555555432 333333 334667776
Q ss_pred eecCcccc--------chhhhHHHHHHHhCCcEEeccc---------------CcccccCCCC
Q 025707 184 LEWSLWAR--------DIENEIVPLCRELGIGIVPYCP---------------LGRGFFGGKA 223 (249)
Q Consensus 184 ~~~n~~~~--------~~~~~~~~~~~~~gi~v~a~sp---------------l~~G~l~g~~ 223 (249)
++-+++.. ..-..+++.|+..|+.|++-.. +.+|++.+++
T Consensus 184 iD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeGVEt~~~~~~l~~~G~~~~QG~~~~~P 246 (250)
T 4f3h_A 184 LDRSITGDIASARESQEKIREITSRAQPTGILTVAEFVADAQSMSSFFTAGVDYVQGDFVAPT 246 (250)
T ss_dssp ECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECCCCCHHHHHHHHHHTCSEECSTTTCCC
T ss_pred ECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEeccCCHHHHHHHHHcCCCEEeeccccCC
Confidence 66433321 1126789999999999998664 6778777774
No 179
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=50.20 E-value=2.6 Score=28.29 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=33.0
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCccccc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVC 236 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~ 236 (249)
..+++.++++||+|+-..||+.-+...-...+.+|++.+...
T Consensus 30 ~~I~~~A~e~~VPi~e~~~LAr~L~~~~~ig~~IP~ely~aV 71 (83)
T 3bzy_B 30 LQIIKLAELYDIPVIEDIPLARSLDKNIHKGQYITEDFFEPV 71 (83)
T ss_dssp HHHHHHHHHTTCCEEECHHHHHHHHHHCCTTCBCCGGGHHHH
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHHHHhCCCCCccCHHHHHHH
Confidence 789999999999999999999888733334456777666543
No 180
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=49.96 E-value=82 Score=24.96 Aligned_cols=100 Identities=10% Similarity=-0.016 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHcCCCceeEEEeecCCC--------------CCCHHHHHHHHHHHHHc-CCeeEEEcCCCCHHHHHHHhh
Q 025707 111 VRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHA 175 (249)
Q Consensus 111 i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~ 175 (249)
+.+.++...+.+..+..|++.=..-.. ....-+++++|.++++. ++|.-||..|.... +..+.+
T Consensus 48 le~av~~a~~~~~~~~~dVIISRGgta~~Lr~~~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~-~~~i~~ 126 (225)
T 2pju_A 48 FEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPA-LVAFQK 126 (225)
T ss_dssp HHHHHHHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHH-HHHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEeCChHHHHHHhhCCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhH-HHHHHH
Confidence 445566655656544467665433211 12346788888888875 67888899887653 333444
Q ss_pred cCCceEEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 176 VHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 176 ~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
...+++.+..|+-.+ .....++.+++.|+.++.-..
T Consensus 127 ll~~~i~~~~~~~~e--e~~~~i~~l~~~G~~vVVG~~ 162 (225)
T 2pju_A 127 TFNLRLDQRSYITEE--DARGQINELKANGTEAVVGAG 162 (225)
T ss_dssp HHTCCEEEEEESSHH--HHHHHHHHHHHTTCCEEEESH
T ss_pred HhCCceEEEEeCCHH--HHHHHHHHHHHCCCCEEECCH
Confidence 444556665544322 127788999999998876543
No 181
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=49.09 E-value=74 Score=26.46 Aligned_cols=151 Identities=8% Similarity=0.037 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.-- |.....+.+ +++++.. .++-|.--... .++++...+-+ +.|
T Consensus 132 ~~e~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~~~-~~~~l~vDaN~----------~~~~~~a~~~~-~~l 196 (324)
T 1jpd_X 132 TPDQMANSASTLWQAGAKLLKVKL--DNHLISERM-VAIRTAV-PDATLIVDANE----------SWRAEGLAARC-QLL 196 (324)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC--CSSCHHHHH-HHHHHHC-TTSEEEEECTT----------CCCSTTHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEe--CCchHHHHH-HHHHHhC-CCCEEEEECcC----------CCCHHHHHHHH-HHH
Confidence 457777788888899999986432 111334444 3454422 34444333211 12333333322 345
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIV 198 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~ 198 (249)
+.+ ++.++..|-...+. +.+.++. .+.=-..|=+.++...+.++++. .+++|+..+-.-. ....++.
T Consensus 197 ~~~-----~i~~iEqP~~~~d~----~~~~~l~-~~ipIa~dE~~~~~~~~~~~~~~--~~~i~ik~~~~GGit~~~~i~ 264 (324)
T 1jpd_X 197 ADL-----GVAMLEQPLPAQDD----AALENFI-HPLPICADESCHTRSNLKALKGR--YEMVNIKLDKTGGLTEALALA 264 (324)
T ss_dssp HHT-----TCCEEECCSCTTSC----GGGGSSC-CSSCEEESTTCSSGGGHHHHBTT--BSEEEECHHHHTSHHHHHHHH
T ss_pred HhC-----CCCEEECCCCCCCH----HHHHhcc-CCCCEEEcCCCCCHHHHHHHHhh--CCEEEEcchhhCcHHHHHHHH
Confidence 555 44677777443332 2222222 22222445566777888887654 6778876554322 1126799
Q ss_pred HHHHHhCCcEEecccCccc
Q 025707 199 PLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 199 ~~~~~~gi~v~a~spl~~G 217 (249)
+.|+++|+.++..+.+..+
T Consensus 265 ~~A~~~g~~~~~~~~~es~ 283 (324)
T 1jpd_X 265 TEARAQGFSLMLGCMLCTS 283 (324)
T ss_dssp HHHHHTTCEEEECCCSCCH
T ss_pred HHHHHcCCcEEEeCcchHH
Confidence 9999999999999887654
No 182
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=48.71 E-value=1.1e+02 Score=25.13 Aligned_cols=144 Identities=11% Similarity=-0.006 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCC----CchHHHHHHHHHc-----CCCCCeEEEecccccccCCcccccCCCHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGP----YTNEILLGKALKE-----LPRENIQVATKFGFVELGFTSVIVKGTPEYVR 112 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~----g~se~~lg~~l~~-----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~ 112 (249)
+...+.+..+++.+.. .|+. ..-++.+.+.+.. ...+++++++= ..+
T Consensus 45 ~~v~~a~~~~~~~~~~------~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g---------------~~~--- 100 (370)
T 2z61_A 45 KPIVDEGIKSLKEGKT------HYTDSRGILELREKISELYKDKYKADIIPDNIIITGG---------------SSL--- 100 (370)
T ss_dssp HHHHHHHHHHHHTTCC------SCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESS---------------HHH---
T ss_pred HHHHHHHHHHHHcCcc------CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCC---------------hHH---
Confidence 5567777777776642 3432 1456777777753 23455555431 122
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc-CCceEEeeecCcccc
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWSLWAR 191 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~n~~~~ 191 (249)
++...+..+ ++.=|-+++..|.... .... ++..| ++.+.+. .+.+.+++++.. .+..++..+.|+.-.
T Consensus 101 -a~~~~~~~~-~~~gd~vl~~~p~~~~----~~~~---~~~~g-~~~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG~ 169 (370)
T 2z61_A 101 -GLFFALSSI-IDDGDEVLIQNPCYPC----YKNF---IRFLG-AKPVFCD-FTVESLEEALSDKTKAIIINSPSNPLGE 169 (370)
T ss_dssp -HHHHHHHHH-CCTTCEEEEESSCCTH----HHHH---HHHTT-CEEEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTCC
T ss_pred -HHHHHHHHh-cCCCCEEEEeCCCchh----HHHH---HHHcC-CEEEEeC-CCHHHHHHhcccCceEEEEcCCCCCcCc
Confidence 333333333 1222667776664421 2222 22233 2333444 678888887753 122233333343222
Q ss_pred ch-hhhHHHHHHHhCCcEEecccCcccccCC
Q 025707 192 DI-ENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (249)
Q Consensus 192 ~~-~~~~~~~~~~~gi~v~a~spl~~G~l~g 221 (249)
.. .. +.+.|+++|+.++.=.....+...+
T Consensus 170 ~~~~~-l~~~~~~~~~~li~De~~~~~~~~g 199 (370)
T 2z61_A 170 VIDRE-IYEFAYENIPYIISDEIYNGLVYEG 199 (370)
T ss_dssp CCCHH-HHHHHHHHCSEEEEECTTTTCBSSS
T ss_pred ccCHH-HHHHHHHcCCEEEEEcchhhcccCC
Confidence 11 14 9999999999999877766555544
No 183
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=48.48 E-value=1e+02 Score=24.53 Aligned_cols=167 Identities=10% Similarity=-0.023 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCC----CCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP----RENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~----r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
+.++..+....+.+.|...++---.|=...+...+.+.++... .-.++++.+..... +. ...+.+.-.+-+
T Consensus 15 ~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eG---G~--~~~~~~~~~~ll 89 (238)
T 1sfl_A 15 SIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQG---GY--GQFTNDSYLNLI 89 (238)
T ss_dssp ---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGT---SC--BCCCHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccC---CC--CCCCHHHHHHHH
Confidence 4566777778888889888875444422223445555554422 22344444432211 11 134555444555
Q ss_pred HHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC------CHHHHHHHhhc---CCceEEeeec
Q 025707 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA------SPDTIRRAHAV---HPITAVQLEW 186 (249)
Q Consensus 116 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~------~~~~l~~~~~~---~~~~~~q~~~ 186 (249)
+..++.-+.||+|+=+-+.. -++....+.+..+++.++-|+ |.| +.+.+...+.. .+.+++=+-.
T Consensus 90 ~~~~~~~~~d~iDvEl~~~~-----~~~~~~~l~~~~~~~~~kvI~-S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~ 163 (238)
T 1sfl_A 90 SDLANINGIDMIDIEWQADI-----DIEKHQRIITHLQQYNKEVII-SHHNFESTPPLDELQFIFFKMQKFNPEYVKLAV 163 (238)
T ss_dssp HHGGGCTTCCEEEEECCTTS-----CHHHHHHHHHHHHHTTCEEEE-EEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHhCCCCEEEEEccCCC-----ChHHHHHHHHHHHhcCCEEEE-EecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 55544436899998543210 224455555555566666665 544 22444333322 3444444443
Q ss_pred CccccchhhhHHHHHHH----hCCcEEecccCccc
Q 025707 187 SLWARDIENEIVPLCRE----LGIGIVPYCPLGRG 217 (249)
Q Consensus 187 n~~~~~~~~~~~~~~~~----~gi~v~a~spl~~G 217 (249)
.+-+......++.+..+ ..+++++++.=..|
T Consensus 164 ~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G 198 (238)
T 1sfl_A 164 MPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLG 198 (238)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGGG
T ss_pred cCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCCCc
Confidence 33333222344444333 36777776654444
No 184
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=48.38 E-value=3 Score=28.61 Aligned_cols=42 Identities=17% Similarity=0.187 Sum_probs=33.2
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCccccc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVC 236 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~ 236 (249)
..+++.|+++||+|+-..||+.-+...-...+.+|+..+...
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr~Ly~~~~ig~~IP~ely~aV 71 (93)
T 2vt1_B 30 LAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFVDFEHLDEV 71 (93)
T ss_dssp HHHHHHHHHTTCCEEECHHHHHHHHHHCCSSEECCTTTHHHH
T ss_pred HHHHHHHHHcCCCEEECHHHHHHHHHcCCCCCccCHHHHHHH
Confidence 789999999999999999999888743334456777666553
No 185
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=47.95 E-value=1.4e+02 Score=25.98 Aligned_cols=98 Identities=8% Similarity=0.008 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-C-CeeEE-Ec-CCCCHHHHHHHhhcCCceE
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-G-KIKYI-GL-SEASPDTIRRAHAVHPITA 181 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir~i-Gv-s~~~~~~l~~~~~~~~~~~ 181 (249)
++++...+-+++..+++ +++++..|-...+ ++.+.+|.++ | .|.-. |= +.++...+.++++....++
T Consensus 267 ~t~~~ai~~~~~L~~~~-----~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~ 337 (431)
T 2fym_A 267 FTSEEFTHFLEELTKQY-----PIVSIEDGLDESD----WDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANS 337 (431)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CceEEECCCCccc----HHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCE
Confidence 45665555444444333 5788988866555 4455555544 2 34323 32 6688999999998888999
Q ss_pred EeeecCccccc-hhhhHHHHHHHhCCcEEecc
Q 025707 182 VQLEWSLWARD-IENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 182 ~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~s 212 (249)
+|+..+-+-.- ...++.+.|+++|+.++...
T Consensus 338 i~ik~~~~GGite~~~i~~~A~~~g~~~~~~h 369 (431)
T 2fym_A 338 ILIKFNQIGSLTETLAAIKMAKDAGYTAVISH 369 (431)
T ss_dssp EEECGGGTCSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEECccccCCHHHHHHHHHHHHHCCCeEEEeC
Confidence 99977654321 12679999999999997643
No 186
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=45.93 E-value=35 Score=28.34 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCC-----HHHHHHHHHHHH-HcCCeeEEEcC
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVP-----IEETIGEMKKLV-EEGKIKYIGLS 163 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~-----~~~~~~~l~~l~-~~G~ir~iGvs 163 (249)
++++.+.|+.||+..=|.+++|..-.... .+.++++|.+++ ++|.+---..+
T Consensus 24 ~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 24 RDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 56788888899999999999998755432 467899998887 57877666544
No 187
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=45.88 E-value=1.5e+02 Score=25.64 Aligned_cols=149 Identities=9% Similarity=0.029 Sum_probs=86.8
Q ss_pred HHHHHHHHHcCCCeEeCCCC------cCCC-ch-----HHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHH
Q 025707 45 ISIIKHAFSKGITFFDTADK------YGPY-TN-----EILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR 112 (249)
Q Consensus 45 ~~~l~~A~~~Gi~~~Dta~~------Yg~g-~s-----e~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~ 112 (249)
.+..+.+++.|++.|=.-+. -|.. .. ....-+++++.-.+++-|.-.... .++.+...
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~----------~~~~~~A~ 230 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHS----------LWGTHAAA 230 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTT----------CBCHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCccCccccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC----------CCCHHHHH
Confidence 45667888999999976211 1100 01 122234454422233333333211 23444433
Q ss_pred HHHHHHHHHcCCCceeEEEeecC-CCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccc
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRV-DTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~-~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (249)
+ +-+.|+.+++++| ..| -...+ ++.+.+++++-.|. ..|=+-++...++++++...++++|+..+-.-
T Consensus 231 ~-~~~~L~~~~i~~i-----EqP~~~~~~----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~G 300 (410)
T 3dip_A 231 R-ICNALADYGVLWV-----EDPIAKMDN----IPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCG 300 (410)
T ss_dssp H-HHHHGGGGTCSEE-----ECCBSCTTC----HHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSS
T ss_pred H-HHHHHHhcCCCEE-----ECCCCCccc----HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccC
Confidence 2 2345566665544 445 33333 45566666653343 44556788999999999888999999877653
Q ss_pred c-chhhhHHHHHHHhCCcEEeccc
Q 025707 191 R-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 191 ~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
. ....++.+.|+++|+.+...++
T Consensus 301 Git~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 301 GLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSS
T ss_pred CHHHHHHHHHHHHHcCCEEeeeCc
Confidence 2 1237799999999999987655
No 188
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=45.79 E-value=77 Score=25.06 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCCeeEEEcCCCCH--HHHHHHhhcCCceEEeee
Q 025707 110 YVRSCCEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYIGLSEASP--DTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 110 ~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~--~~l~~~~~~~~~~~~q~~ 185 (249)
.+...+.+.+++.+++.-. +.+.-.+. ..+.+.+.+.+++|++.|. .|.+.++.. ..+..+ ...+++.+=++
T Consensus 106 ~~~~~l~~~l~~~~~~~~~-l~lEitE~~~~~~~~~~~~~l~~l~~~G~--~ialDdfG~g~ssl~~L-~~l~~d~iKiD 181 (259)
T 3s83_A 106 GLVADVAETLRVNRLPRGA-LKLEVTESDIMRDPERAAVILKTLRDAGA--GLALDDFGTGFSSLSYL-TRLPFDTLKID 181 (259)
T ss_dssp THHHHHHHHHHHTTCCTTS-EEEEEEHHHHHHCHHHHHHHHHHHHHHTC--EEEEECC---CHHHHHH-HHSCCCEEEEC
T ss_pred HHHHHHHHHHHHcCCCcce-EEEEECCchhhhCHHHHHHHHHHHHHCCC--EEEEECCCCCchhHHHH-HhCCCCEEEEC
Confidence 3566788888888764322 22221111 1345678888999999998 677776654 233333 33567777776
Q ss_pred cCcccc--------chhhhHHHHHHHhCCcEEecc---------------cCcccccCCCC
Q 025707 186 WSLWAR--------DIENEIVPLCRELGIGIVPYC---------------PLGRGFFGGKA 223 (249)
Q Consensus 186 ~n~~~~--------~~~~~~~~~~~~~gi~v~a~s---------------pl~~G~l~g~~ 223 (249)
-+++.. ..-..+++.|++.|+.|++-. .+.+|++.+++
T Consensus 182 ~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeGVEt~~~~~~l~~lG~~~~QG~~~~~p 242 (259)
T 3s83_A 182 RYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEGVENAEMAHALQSLGCDYGQGFGYAPA 242 (259)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHTCCEECBTTTBCC
T ss_pred HHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHhcCCCEeecCcccCC
Confidence 544321 112678999999999999876 47888888874
No 189
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=45.53 E-value=1.3e+02 Score=25.08 Aligned_cols=154 Identities=10% Similarity=0.088 Sum_probs=80.9
Q ss_pred HHHHHHHHHHcCCCeEeCC--C----CcCCCchHHHH---HHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHH
Q 025707 44 GISIIKHAFSKGITFFDTA--D----KYGPYTNEILL---GKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (249)
Q Consensus 44 ~~~~l~~A~~~Gi~~~Dta--~----~Yg~g~se~~l---g~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~ 114 (249)
+.+.++.+.+.||.+++.- | .+|- .-+..+ .++++.. +.+.-|..|+-... ....+++...+.
T Consensus 80 a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl-~~~~~v~~v~~~~~~a-~~~~gi~~~lI~~~------~R~~~~~~a~~~ 151 (326)
T 3pao_A 80 TWAYLQKCKAQNVVHVEPFFDPQTHTDRGI-PFEVVLAGIRAALRDG-EKLLGIRHGLILSF------LRHLSEEQAQKT 151 (326)
T ss_dssp HHHHHHHHHHTTEEEECCEECHHHHHTTTC-CHHHHHHHHHHHHHHH-HHHHCCEECCEEEE------ETTSCHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEEChHHhccCCC-CHHHHHHHHHHHHHHH-HhhCceEEEEEEEe------CCCCCHHHHHHH
Confidence 4556667778899997642 2 1221 123333 3333321 11112333322111 113456777777
Q ss_pred HHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-CHHHHHHHhhcCCceEEeeecCccccch
Q 025707 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHAVHPITAVQLEWSLWARDI 193 (249)
Q Consensus 115 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~~n~~~~~~ 193 (249)
++..++-- +.+.-+=+.......+.+...+.++..++.|.-..+=+... +++.+.+++.....+-+-.-+.+..
T Consensus 152 ~~~a~~~~--~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rigHgv~l~~--- 226 (326)
T 3pao_A 152 LDQALPFR--DAFIAVGLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFE--- 226 (326)
T ss_dssp HHHHGGGG--GGCSEEEEESCCTTCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHHHHHHHTTCCSSEEECGGGGG---
T ss_pred HHHHhhcc--ccceeeCCCCCCCCCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHHHHHHhcCCCceeeeeeeecc---
Confidence 77766532 23333444444444555666777888888887655544433 4566666665433332222222221
Q ss_pred hhhHHHHHHHhCCcEEe
Q 025707 194 ENEIVPLCRELGIGIVP 210 (249)
Q Consensus 194 ~~~~~~~~~~~gi~v~a 210 (249)
..++++.++++||.+..
T Consensus 227 d~~l~~~l~~~~i~le~ 243 (326)
T 3pao_A 227 DERLMRRLIDEQIPLTV 243 (326)
T ss_dssp CHHHHHHHHHHTCCEEE
T ss_pred cHHHHHHHHHcCCeEEE
Confidence 15699999999999864
No 190
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=45.27 E-value=24 Score=29.07 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=38.4
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCC-----CHHHHHHHHHHHHH-cCCeeEEEc
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSV-----PIEETIGEMKKLVE-EGKIKYIGL 162 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~-----~~~~~~~~l~~l~~-~G~ir~iGv 162 (249)
++++.+.|++||++.=|.+++|..-... ..+.++++|.+++. +|.+---..
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~ 73 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQ 73 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEecc
Confidence 4667788889999999999999874432 24678999888875 677655544
No 191
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=45.16 E-value=1.5e+02 Score=25.42 Aligned_cols=69 Identities=13% Similarity=-0.001 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCCCHH-HHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEee
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIE-ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~-~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (249)
..+-+.|+..|+|+|++ |......... .-++.+.++++.=.+--|+....+++..+++++....+.+++
T Consensus 258 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 258 FYLAGELDRRGLAYLHF---NEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCC------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---eCCcccCCCCcchHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEee
Confidence 44667788889888776 4321100000 124556667776667788888888999999998877888877
No 192
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=44.95 E-value=1.6e+02 Score=25.77 Aligned_cols=96 Identities=14% Similarity=0.050 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-C-Cee-EEEcC-CCCHHHHHHHhhcCCceE
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-G-KIK-YIGLS-EASPDTIRRAHAVHPITA 181 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir-~iGvs-~~~~~~l~~~~~~~~~~~ 181 (249)
++++...+-+++..+.+ +++++..|-...+ ++.+.+|.++ | .|. ..|=+ .++...+.++++...+++
T Consensus 279 ~t~~eai~~~~~l~~~~-----~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~ 349 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKY-----PIITIEDGMDEND----WDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANS 349 (444)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCChhh----HHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCE
Confidence 45666655555555544 5788888866554 3444455443 1 333 33444 678899999998888899
Q ss_pred EeeecCccccc-hhhhHHHHHHHhCCcEEe
Q 025707 182 VQLEWSLWARD-IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 182 ~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a 210 (249)
+|+..+-+-.- ...++.+.|+++|+.++.
T Consensus 350 i~ik~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 350 ILIKVNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp EEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEcccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 99976654321 126799999999999987
No 193
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=44.92 E-value=1.2e+02 Score=24.97 Aligned_cols=99 Identities=13% Similarity=0.151 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEee-cCCC-CC----CHHHHHHHHHHHHHc-CCeeEEEcCCCCHHHHHHHhhcCCc
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQH-RVDT-SV----PIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPI 179 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh-~~~~-~~----~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~ 179 (249)
+++.+.+..++ +..-|.|.||+---- +|.. .. .++.+...++.++++ +. -|.+-+++++.++++++....
T Consensus 36 ~~~~a~~~a~~-~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa~ 112 (282)
T 1aj0_A 36 SLIDAVKHANL-MINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGAH 112 (282)
T ss_dssp HHHHHHHHHHH-HHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCCC
Confidence 34555554433 334589999998754 2432 12 233356666666655 43 578889999999999987433
Q ss_pred eEEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 180 TAVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 180 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
-++ ..|-. . ..++++.+++.|++++.+..
T Consensus 113 iIN--dvsg~-~--d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 113 IIN--DIRSL-S--EPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp EEE--ETTTT-C--STTHHHHHHHHTCCEEEECC
T ss_pred EEE--ECCCC-C--CHHHHHHHHHhCCeEEEEcc
Confidence 222 23332 1 36799999999999998754
No 194
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=44.55 E-value=1.3e+02 Score=24.67 Aligned_cols=100 Identities=17% Similarity=0.091 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEee-cC-----CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCce
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQH-RV-----DTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh-~~-----~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (249)
+++.+.+..++ +..-|.|.||+---- .| +..+.+..+...++.+++++. -|.+-+++++.++++++....-
T Consensus 27 ~~~~a~~~a~~-~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa~i 103 (280)
T 1eye_A 27 DLDDAVKHGLA-MAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGAQM 103 (280)
T ss_dssp SHHHHHHHHHH-HHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCCCE
Confidence 45666555543 345689999998532 12 223456677888888887643 5788999999999999874322
Q ss_pred EEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 181 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+ +..|-... ..++++.+++.|++++.+..
T Consensus 104 I--Ndvsg~~~--d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 104 V--NDVSGGRA--DPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp E--EETTTTSS--CTTHHHHHHHHTCCEEEECC
T ss_pred E--EECCCCCC--CHHHHHHHHHhCCeEEEEcC
Confidence 2 33333322 36799999999999999864
No 195
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=44.46 E-value=1.7e+02 Score=25.92 Aligned_cols=100 Identities=16% Similarity=0.083 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE--cCCCCHHHHHHHhhcCCceEEe
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG--LSEASPDTIRRAHAVHPITAVQ 183 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG--vs~~~~~~l~~~~~~~~~~~~q 183 (249)
.+++.+.+-+.+.++++. ++++..|-...+++. |..|.+... .+|.-+| ++..++..++++++....++++
T Consensus 281 ~t~~Elid~y~~lle~yp-----Iv~IEDPl~~dD~eg-~a~Lt~~lg-~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~Il 353 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKYP-----IISVEDPFDQDDFAS-FSAFTKDVG-EKTQVIGDDILVTNILRIEKALKDKACNCLL 353 (452)
T ss_dssp ECHHHHHHHHHHHHHHSC-----EEEEECCSCTTCHHH-HHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHHTCCSEEE
T ss_pred ccHHHHHHHHHHHHhhhC-----ceEEecCCChhhHHH-HHHHHHhhC-CCeEEEeCccccCCHHHHHHHHhcCCCCEEE
Confidence 467888777777777653 788888876666532 333333221 2466677 3455789999998887788888
Q ss_pred eecCccccc-hhhhHHHHHHHhCCcEEecc
Q 025707 184 LEWSLWARD-IENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 184 ~~~n~~~~~-~~~~~~~~~~~~gi~v~a~s 212 (249)
+..|=.-.- ...++.+.|+++|+.++...
T Consensus 354 IKvnQIGgITEalka~~lA~~~G~~vmvsh 383 (452)
T 3otr_A 354 LKVNQIGSVTEAIEACLLAQKSGWGVQVSH 383 (452)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred eeccccccHHHHHHHHHHHHHcCCeEEEeC
Confidence 876543221 12678999999999977643
No 196
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=43.33 E-value=1.6e+02 Score=25.21 Aligned_cols=69 Identities=14% Similarity=0.061 Sum_probs=44.2
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCC--CHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEee
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSV--PIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~--~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (249)
..+-+.|+..|+++|++ |...... +....++.+.++++.=.+--|+....+++..+++++....+.+++
T Consensus 259 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~ 329 (376)
T 1icp_A 259 LYMVESLNKYDLAYCHV---VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAY 329 (376)
T ss_dssp HHHHHHHGGGCCSEEEE---ECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---cCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEee
Confidence 44566788888877665 4332110 100123445566666566778888888899999998887888887
No 197
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=43.31 E-value=64 Score=27.87 Aligned_cols=149 Identities=8% Similarity=0.013 Sum_probs=84.9
Q ss_pred HHHHHHHHHcCCCeEeCCCC--------cCCCc-----hHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHH
Q 025707 45 ISIIKHAFSKGITFFDTADK--------YGPYT-----NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (249)
Q Consensus 45 ~~~l~~A~~~Gi~~~Dta~~--------Yg~g~-----se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i 111 (249)
.+..+.+++.|++.|=.-.. .|.-. .....-+++++.-.+++-|.-.... .++.+..
T Consensus 157 ~~~a~~~~~~G~~~~Kik~g~~~~~~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A 226 (400)
T 4dxk_A 157 DELAHSLLEDGITAMKIWPFDAAAEKTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHS----------MWQLLPA 226 (400)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTT----------CBCHHHH
T ss_pred HHHHHHHHHhCCCEEEEcCCCccccccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC----------CCCHHHH
Confidence 45566888999999966432 01000 0112223444321233333333211 2344443
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccc
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (249)
.+ +-+.|+.++++ +++.|-... .++.+.++++.-.|. ..|=+-++...++++++...++++|+..+-.-
T Consensus 227 ~~-~~~~L~~~~i~-----~iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~G 296 (400)
T 4dxk_A 227 MQ-IAKALTPYQTF-----WHEDPIKMD----SLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCG 296 (400)
T ss_dssp HH-HHHHTGGGCCS-----EEECCBCTT----SGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTT
T ss_pred HH-HHHHHhhcCCC-----EEEcCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccC
Confidence 32 23455556654 445553332 245567777665554 34456678889999998888999999876653
Q ss_pred c-chhhhHHHHHHHhCCcEEeccc
Q 025707 191 R-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 191 ~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
. ....++.+.|+++|+.++..++
T Consensus 297 Git~~~kia~~A~~~gi~~~~h~~ 320 (400)
T 4dxk_A 297 GLSEARKIASMAEAWHLPVAPHXC 320 (400)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEC-C
T ss_pred CHHHHHHHHHHHHHcCCEEEecCC
Confidence 2 1227799999999999987654
No 198
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=49.32 E-value=5 Score=28.63 Aligned_cols=43 Identities=14% Similarity=0.210 Sum_probs=34.3
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccC
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCF 237 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~ 237 (249)
..+++.|+++||.|+-..||+.-+...-...+.+|+..+....
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr~Ly~~~~ig~~IP~ely~aVA 72 (114)
T 3b0z_B 30 LRIREIGAEHRVPTLEAPPLARALYRHAEIGQQIPGQLYAAVA 72 (114)
Confidence 7799999999999999999999887544445667777776653
No 199
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=43.26 E-value=74 Score=23.33 Aligned_cols=97 Identities=15% Similarity=0.136 Sum_probs=62.1
Q ss_pred eecccccCCCCCCCCHHHHHHHHHHHHHcCCCe----EeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcc
Q 025707 26 YGCMSLSGCYNSPLSEEDGISIIKHAFSKGITF----FDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTS 101 (249)
Q Consensus 26 ~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~----~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~ 101 (249)
|||.+ |-...++++..+-|+.++..|.+. -|....|-.+.+-..++..--+..|...+-.-|+....
T Consensus 12 ~etfS----yLP~lt~eqI~kQI~YlL~qGw~p~lEf~d~~~~~r~~~~~~~~~~~~~~yyd~~YW~mWkLPmFg----- 82 (140)
T 1gk8_I 12 FETFS----YLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFG----- 82 (140)
T ss_dssp CSTTT----TSSCCCHHHHHHHHHHHHHTTCEEEEEEECGGGTSCBCGGGGGCSSCCTTCCBTSSCEEESCCCTT-----
T ss_pred ecccc----cCCCCCHHHHHHHHHHHHHCCCEeeEEeccCCcceecccccccccccCCCcCcCCeeeeCCcCCcC-----
Confidence 55543 445678999999999999998653 24444453222222222111113567777777765433
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCceeEEEeec
Q 025707 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHR 134 (249)
Q Consensus 102 ~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~ 134 (249)
..+++.+...|+++++..--.||=|+-+.+
T Consensus 83 ---~td~~qVl~El~~C~k~~P~~YVRligfDn 112 (140)
T 1gk8_I 83 ---CRDPMQVLREIVACTKAFPDAYVRLVAFDN 112 (140)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTSEEEEEEEET
T ss_pred ---CCCHHHHHHHHHHHHHHCCCCeEEEEEEeC
Confidence 357899999999999998877877765544
No 200
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=41.64 E-value=1.6e+02 Score=24.93 Aligned_cols=97 Identities=13% Similarity=0.186 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC---CH-HHHHHHhhcCCceEEeee
Q 025707 110 YVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA---SP-DTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 110 ~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~---~~-~~l~~~~~~~~~~~~q~~ 185 (249)
...+.++..++ .. +.+.-+=++.+... .+...+.++..++.|.--.+=++.. ++ ..+.+++.....+.+-.-
T Consensus 187 ~~~~~~~~a~~-~~-~~vvg~dl~g~e~~--~~~~~~~~~~A~~~gl~~~~HagE~~~~~~~~~i~~al~~lg~~ri~Hg 262 (371)
T 2pgf_A 187 NIKASADFCLK-HK-ADFVGFDHGGHEVD--LKEYKEIFDYVRESGVPLSVHAGEDVTLPNLNTLYSAIQVLKVERIGHG 262 (371)
T ss_dssp CHHHHHHHHHH-TT-TTEEEEEEEESCCC--GGGGHHHHHHHHHTTCCBEEEESCCTTSSSSHHHHHHHHTSCCSEEEEC
T ss_pred HHHHHHHHHHh-CC-CCEEEEecCCCccc--HHHHHHHHHHHHHcCCcEEEeeCCCCCCCchHHHHHHHhccCCCEEecc
Confidence 34455555555 22 33444445555443 4455666777777776544433322 34 556666664333433332
Q ss_pred cCccccchhhhHHHHHHHhCCcEEecccC
Q 025707 186 WSLWARDIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 186 ~n~~~~~~~~~~~~~~~~~gi~v~a~spl 214 (249)
+.+.+ ...+++.++++||.+. ..|.
T Consensus 263 v~l~~---~~~l~~~l~~~~i~v~-~cP~ 287 (371)
T 2pgf_A 263 IRVAE---SQELIDMVKEKNILLE-VCPI 287 (371)
T ss_dssp GGGGG---CHHHHHHHHHTTCEEE-ECHH
T ss_pred hhccc---cHHHHHHHHHcCCeEE-ECcc
Confidence 22221 2568999999999984 3454
No 201
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=41.61 E-value=31 Score=28.43 Aligned_cols=51 Identities=18% Similarity=0.154 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCC-----CHHHHHHHHHHHHH-cCCeeEEEc
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSV-----PIEETIGEMKKLVE-EGKIKYIGL 162 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~-----~~~~~~~~l~~l~~-~G~ir~iGv 162 (249)
++++.+.|+.||+..=|.+++|..-... ....++++|.+.+- +|.+--=..
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPtf 71 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQ 71 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEECC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEecc
Confidence 4567778889999999999999864432 25678999888774 776554333
No 202
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=41.56 E-value=1.3e+02 Score=23.82 Aligned_cols=81 Identities=7% Similarity=0.063 Sum_probs=46.4
Q ss_pred HcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHH
Q 025707 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPL 200 (249)
Q Consensus 121 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~ 200 (249)
.+|.|++-+++..........+.+-+..+. ....+..+|+.. +++.+...++...++++|+.=+- ..+.++.
T Consensus 38 ~~gaD~iGfIf~~~SpR~V~~~~A~~i~~~--~~~~~~~v~v~v-~~~ei~~~i~~~~ld~vQLHG~E-----~~~~~~~ 109 (228)
T 4aaj_A 38 EKHADATGVVVNSNSKRRIPLEKAREIIEN--SAIPVFLVSTMV-GFSEWAMAIERTGAQYIQVHSNA-----LPQTIDT 109 (228)
T ss_dssp HTTCSEEEEECSSSSTTBCCHHHHHHHHHH--CSSCEEEEECCC-CHHHHHHHHHHHTCSEEEECSCC-----CHHHHHH
T ss_pred HcCCCEEEEEecCCCCCCCCHHHHHHHHHh--hCCCCEEEeccC-chHHHHHHHHhccchheeccccc-----CHHHHHH
Confidence 479999988775444444555554333222 123456667654 35666666677788999984221 1233333
Q ss_pred HH-HhCCcEE
Q 025707 201 CR-ELGIGIV 209 (249)
Q Consensus 201 ~~-~~gi~v~ 209 (249)
.+ +.++.|+
T Consensus 110 l~~~~~~~vi 119 (228)
T 4aaj_A 110 LKKEFGVFVM 119 (228)
T ss_dssp HHHHHCCEEE
T ss_pred HhhccCceEE
Confidence 33 3477765
No 203
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=41.41 E-value=1.7e+02 Score=24.96 Aligned_cols=128 Identities=23% Similarity=0.199 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHH-----------------HHc--CCCCCeEEEecccccccCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKA-----------------LKE--LPRENIQVATKFGFVELGF 99 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~-----------------l~~--~~r~~~~I~tK~~~~~~~~ 99 (249)
.+.+....+.+++-+.|+.+|=|.-.-. +-..+-+. |+. .....++++|=.
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~---svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGm------- 157 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRA---AALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGM------- 157 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT-------
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHH---HHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCC-------
Q ss_pred cccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHH--HHHHHHHHHc--CCeeEEEcCCCCHHHHHHHhh
Q 025707 100 TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEET--IGEMKKLVEE--GKIKYIGLSEASPDTIRRAHA 175 (249)
Q Consensus 100 ~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~--~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~ 175 (249)
.+.+.+..+++-....=. ++.++|+........+. +.++..|++. +. -||+|+|+.........
T Consensus 158 ------at~~Ei~~Ave~i~~~G~----~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~l--pVg~sdHt~G~~~~~AA 225 (349)
T 2wqp_A 158 ------NSIESIKKSVEIIREAGV----PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDA--IIGLSDHTLDNYACLGA 225 (349)
T ss_dssp ------CCHHHHHHHHHHHHHHTC----CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTS--EEEEECCSSSSHHHHHH
T ss_pred ------CCHHHHHHHHHHHHHcCC----CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCC--CEEeCCCCCcHHHHHHH
Q ss_pred c-CCceEEeeecCc
Q 025707 176 V-HPITAVQLEWSL 188 (249)
Q Consensus 176 ~-~~~~~~q~~~n~ 188 (249)
. .+.+++...+++
T Consensus 226 vAlGA~iIEkH~tl 239 (349)
T 2wqp_A 226 VALGGSILERHFTD 239 (349)
T ss_dssp HHHTCCEEEEEBCS
T ss_pred HHhCCCEEEeCCCc
No 204
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=40.88 E-value=1.6e+02 Score=24.65 Aligned_cols=152 Identities=12% Similarity=0.098 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCC----chHHHHHHHHHc-----CCC-CCeEEEecccccccCCcccccCCCHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPY----TNEILLGKALKE-----LPR-ENIQVATKFGFVELGFTSVIVKGTPEY 110 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g----~se~~lg~~l~~-----~~r-~~~~I~tK~~~~~~~~~~~~~~~s~~~ 110 (249)
.+...+.+..+++.+. ....|+.. .-++.+.+.+.. ... +++++++=
T Consensus 43 ~~~v~~a~~~~~~~~~----~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g------------------- 99 (422)
T 3fvs_A 43 PDFAVEAFQHAVSGDF----MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVG------------------- 99 (422)
T ss_dssp CHHHHHHHHHHHHSCG----GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESH-------------------
T ss_pred CHHHHHHHHHHHhCCC----ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECC-------------------
Confidence 4667788888887654 12244421 345667777653 222 35555331
Q ss_pred HHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC---------------CCHHHHHHHhh
Q 025707 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE---------------ASPDTIRRAHA 175 (249)
Q Consensus 111 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~---------------~~~~~l~~~~~ 175 (249)
..+++...+..+ ++.=|-+++..|.... ....+. . ....+..+-+.. .+.+.+++++.
T Consensus 100 ~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~~~~~~---~--~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~ 172 (422)
T 3fvs_A 100 GYGALFTAFQAL-VDEGDEVIIIEPFFDC-YEPMTM---M--AGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT 172 (422)
T ss_dssp HHHHHHHHHHHH-CCTTCEEEEEESCCTT-HHHHHH---H--TTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC
T ss_pred hHHHHHHHHHHH-cCCCCEEEEcCCCchh-hHHHHH---H--cCCEEEEEecccccccccccccccCCCCCHHHHHhhcC
Confidence 123344444444 2333656666654322 222221 1 123566666653 46777777654
Q ss_pred c-CCceEEeeecCccccc----hhhhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 176 V-HPITAVQLEWSLWARD----IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 176 ~-~~~~~~q~~~n~~~~~----~~~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
. ....++..+.|+.-.. ...++.+.|+++|+.++.=...+....+++
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 224 (422)
T 3fvs_A 173 SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH 224 (422)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred CCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC
Confidence 3 2233344444543221 238899999999999998777765445554
No 205
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=39.80 E-value=1.5e+02 Score=24.13 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=11.7
Q ss_pred CHHHHHHHHHHHHHcC-CCeEeC
Q 025707 40 SEEDGISIIKHAFSKG-ITFFDT 61 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~G-i~~~Dt 61 (249)
++++-.++++.|++.| +.++|.
T Consensus 117 ~~~~~~~ll~~~l~~g~~dyIDv 139 (276)
T 3o1n_A 117 TTGQYIDLNRAAVDSGLVDMIDL 139 (276)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCCCEEEE
Confidence 3445555555555555 555554
No 206
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=39.71 E-value=1.5e+02 Score=23.90 Aligned_cols=122 Identities=13% Similarity=0.055 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHHHHHcC-CCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSKG-ITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~G-i~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.++++-.++++.|++.| +.++|.=-.++. .-...+..+- ....++++|..-+... .+.+.+.+-+++
T Consensus 97 ~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~--~~~~kvI~S~Hdf~~t---------P~~~el~~~~~~ 164 (257)
T 2yr1_A 97 LNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTE--ECSVWLVVSRHYFDGT---------PRKETLLADMRQ 164 (257)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHH--HTTCEEEEEEEESSCC---------CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHH--hCCCEEEEEecCCCCC---------cCHHHHHHHHHH
Confidence 36788888999999988 888887554431 1122222222 2455667766543221 123445444443
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~ 175 (249)
...+|.|.+=+... +....+....+++..++.+...+--|++|.-..-.+-++..
T Consensus 165 -~~~~gaDivKia~~--a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~ 219 (257)
T 2yr1_A 165 -AERYGADIAKVAVM--PKSPEDVLVLLQATEEARRELAIPLITMAMGGLGAITRLAG 219 (257)
T ss_dssp -HHHTTCSEEEEEEC--CSSHHHHHHHHHHHHHHHHHCSSCEEEEECTTTTHHHHHHG
T ss_pred -HHhcCCCEEEEEec--cCCHHHHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHH
Confidence 34567755554444 22223333344444444333455667776666555555544
No 207
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=39.60 E-value=1.5e+02 Score=25.33 Aligned_cols=24 Identities=13% Similarity=0.405 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTA 62 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta 62 (249)
++.++-.++++..-+.|+..|+..
T Consensus 31 ~~~~~Kl~ia~~L~~~Gv~~IE~g 54 (370)
T 3rmj_A 31 MTKEEKIRVARQLEKLGVDIIEAG 54 (370)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEe
Confidence 578899999999999999999986
No 208
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=39.59 E-value=19 Score=29.99 Aligned_cols=62 Identities=16% Similarity=0.196 Sum_probs=40.6
Q ss_pred cccCcceeecccccCCCCCCC-----CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHc
Q 025707 19 LEVSKLGYGCMSLSGCYNSPL-----SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE 80 (249)
Q Consensus 19 ~~vs~lg~Gt~~~~~~~~~~~-----~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~ 80 (249)
..-+++++|+|.++..++.-. +.....+.++.|-+. |+..++....+.....-+.+.+.+++
T Consensus 5 ~~~~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~ 72 (333)
T 3ktc_A 5 YNYPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKD 72 (333)
T ss_dssp CCCCCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHH
T ss_pred cCCCcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHH
Confidence 345788999999888444311 123346788888889 99999986333212345666777764
No 209
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=39.54 E-value=1.5e+02 Score=24.04 Aligned_cols=140 Identities=11% Similarity=-0.054 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
+...+.+..+++....+ ..+.+ ..-++.+.+.+. ...+++++++= ..+++...+..
T Consensus 42 ~~v~~a~~~~~~~~~~y--~~~~~--~~l~~~la~~~~-~~~~~i~~~~g-------------------~t~al~~~~~~ 97 (361)
T 3ftb_A 42 KSFLNNIDEGIKNLGVY--PDVNY--RRLNKSIENYLK-LKDIGIVLGNG-------------------ASEIIELSISL 97 (361)
T ss_dssp HHHHTTHHHHHHGGGSC--CCTTC--HHHHHHHHHHHT-CCSCEEEEESS-------------------HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCC--CCccH--HHHHHHHHHHhC-CCcceEEEcCC-------------------HHHHHHHHHHH
Confidence 55666667777653222 11222 135566666664 34556655431 12445555555
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC---CCCHHHHHHHhhcCCceEEeeecCcccc----chh
Q 025707 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS---EASPDTIRRAHAVHPITAVQLEWSLWAR----DIE 194 (249)
Q Consensus 122 Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs---~~~~~~l~~~~~~~~~~~~q~~~n~~~~----~~~ 194 (249)
+ |-+++..|.... ....++.. -.++..+-+. .++.+.+++++...+..++..+.|+.-. ...
T Consensus 98 ~-----d~vi~~~~~~~~----~~~~~~~~--g~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l 166 (361)
T 3ftb_A 98 F-----EKILIIVPSYAE----YEINAKKH--GVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKF 166 (361)
T ss_dssp C-----SEEEEEESCCTH----HHHHHHHT--TCEEEEEECCTTSCCCHHHHHHHTTTCSEEEEETTBTTTTBCCCHHHH
T ss_pred c-----CcEEEecCChHH----HHHHHHHc--CCeEEEeecCcccCCCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHH
Confidence 5 667776664321 22222111 2355555543 5677788887765444444445555322 123
Q ss_pred hhHHHHHHHhCCcEEecccCcc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~ 216 (249)
.++.+.|+++|+.++.=.....
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~ 188 (361)
T 3ftb_A 167 IHVLKLAEEKKKTIIIDEAFIE 188 (361)
T ss_dssp HHHHHHHHHHTCEEEEECSSGG
T ss_pred HHHHHHhhhcCCEEEEECcchh
Confidence 7899999999999997655543
No 210
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=39.51 E-value=1.3e+02 Score=26.99 Aligned_cols=131 Identities=14% Similarity=0.095 Sum_probs=73.0
Q ss_pred hHHHHHHHHHc----CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCC-HHHH
Q 025707 70 NEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP-IEET 144 (249)
Q Consensus 70 se~~lg~~l~~----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~-~~~~ 144 (249)
.|+-|-+++++ .+.+=|+|.|-.-.. -|-..++...+++.. .+.++.++.|.-... ....
T Consensus 69 ~e~kL~~aI~~~~~~~~P~~I~V~tTC~~e--------------lIGdDi~~v~~~~~~-~~pVi~v~tpgf~g~~~~G~ 133 (525)
T 3aek_B 69 TAILLKDALAAAHARYKPQAMAVALTCTAE--------------LLQDDPNGISRALNL-PVPVVPLELPSYSRKENYGA 133 (525)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEECTTGG--------------GSCCCHHHHHHHHTC-SSCEEECCCCTTTCCHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCEEEEECCcHHH--------------HhcccHHHHHHHhcC-CCCEEEEECCCcCCchhHHH
Confidence 56666666655 334446666654322 222234444444443 567899998866543 2222
Q ss_pred HHHHHHHHH----------cCCeeEEEcCCC------CHHHHHHHhhcCCceEEe-ee---------------cCcccc-
Q 025707 145 IGEMKKLVE----------EGKIKYIGLSEA------SPDTIRRAHAVHPITAVQ-LE---------------WSLWAR- 191 (249)
Q Consensus 145 ~~~l~~l~~----------~G~ir~iGvs~~------~~~~l~~~~~~~~~~~~q-~~---------------~n~~~~- 191 (249)
-.++..+.+ .++|--||..+. +.+.+.++++..++.++. ++ +|+...
T Consensus 134 ~~al~alv~~~~~~~~~~~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~pgg~t~~ei~~~~~A~~niv~~~ 213 (525)
T 3aek_B 134 DETFRALVRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASPDDLRKLGQAHFNVLMYP 213 (525)
T ss_dssp HHHHHHHHHHHCCCCCCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEETTCCHHHHHTGGGSSEEEECCH
T ss_pred HHHHHHHHHHhccCccCCCCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhccCCEEEEECh
Confidence 223333332 256888998873 346777888877776655 22 233221
Q ss_pred chhhhHHHHHHH-hCCcEEecccCc
Q 025707 192 DIENEIVPLCRE-LGIGIVPYCPLG 215 (249)
Q Consensus 192 ~~~~~~~~~~~~-~gi~v~a~spl~ 215 (249)
.....+.++.++ .|++.+...|++
T Consensus 214 ~~g~~~A~~Le~r~GiP~i~~~PiG 238 (525)
T 3aek_B 214 ETGESAARHLERACKQPFTKIVPIG 238 (525)
T ss_dssp HHHHHHHHHHHHHSCCCBCCCCCCS
T ss_pred hhHHHHHHHHHHHcCCCceecCCcC
Confidence 112445666654 499999887776
No 211
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=38.17 E-value=1.8e+02 Score=24.51 Aligned_cols=153 Identities=13% Similarity=0.043 Sum_probs=90.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.+..+.+.|++.|-.--........+.+ +++++.-.+++-|.--... .++++...+-++. |
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v-~avr~a~g~~~~l~vDaN~----------~~~~~~a~~~~~~-l 211 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGREPEKDPERV-RAAREAIGESVELMVDANG----------AYTRKQALYWAGA-F 211 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSSGGGHHHHH-HHHHHHHCTTSEEEEECTT----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 45667777888889999998642211111233333 3444311224444333211 2456555554443 5
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCC---eeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK---IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~---ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
+.+ .++.++..|-...+ ++.+.+|.++-. =-..|=+.++...+.++ ...++++|+..+-.-. ....
T Consensus 212 ~~~----~~i~~iEqP~~~~d----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~i~ik~~~~GGit~~~ 281 (372)
T 3cyj_A 212 ARE----AGISYLEEPVSSED----REGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AGCVDILQADVTRCGGITGLL 281 (372)
T ss_dssp HHH----HCCCEEECSSCTTC----HHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HTTCSEEEECTTTTTHHHHHT
T ss_pred Hhh----cCCcEEECCCCccc----HHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hCCCCEEecCchhhCCHHHHH
Confidence 555 14567777755444 455566665433 23446677888888887 5567889987766432 1127
Q ss_pred hHHHHHHHhCCcEEecccC
Q 025707 196 EIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl 214 (249)
++.+.|+++|+.++..+.+
T Consensus 282 ~i~~~A~~~gi~~~~~~~~ 300 (372)
T 3cyj_A 282 RVDGICRGHQIPFSAHCAP 300 (372)
T ss_dssp THHHHHHHHTCCEEECSCH
T ss_pred HHHHHHHHcCCeecccchH
Confidence 8999999999999988754
No 212
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=38.15 E-value=1.3e+02 Score=22.77 Aligned_cols=89 Identities=21% Similarity=0.253 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeee
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
+.+...+-+ +.+..-|.+ ++-+|.... ...+.++.+.+....+. .||+ +..++++++.+.+. ..+++ +.
T Consensus 20 ~~~~~~~~~-~~~~~~G~~---~iev~~~~~--~~~~~i~~ir~~~~~~~--~ig~~~v~~~~~~~~a~~~-Gad~i-v~ 89 (205)
T 1wa3_A 20 SVEEAKEKA-LAVFEGGVH---LIEITFTVP--DADTVIKELSFLKEKGA--IIGAGTVTSVEQCRKAVES-GAEFI-VS 89 (205)
T ss_dssp SHHHHHHHH-HHHHHTTCC---EEEEETTST--THHHHHHHTHHHHHTTC--EEEEESCCSHHHHHHHHHH-TCSEE-EC
T ss_pred CHHHHHHHH-HHHHHCCCC---EEEEeCCCh--hHHHHHHHHHHHCCCCc--EEEecccCCHHHHHHHHHc-CCCEE-Ec
Confidence 455544443 344556664 455665432 23344444444433233 5777 44788888777664 44555 22
Q ss_pred cCccccchhhhHHHHHHHhCCcEEe
Q 025707 186 WSLWARDIENEIVPLCRELGIGIVP 210 (249)
Q Consensus 186 ~n~~~~~~~~~~~~~~~~~gi~v~a 210 (249)
+.. ..++++.|++.|+.++.
T Consensus 90 --~~~---~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 90 --PHL---DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp --SSC---CHHHHHHHHHHTCEEEC
T ss_pred --CCC---CHHHHHHHHHcCCcEEC
Confidence 211 25689999999999986
No 213
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=38.08 E-value=1.8e+02 Score=24.32 Aligned_cols=150 Identities=8% Similarity=0.089 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCC-CHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~-s~~~i~~~~~~s 118 (249)
+.++..+.++.+.+ |++.|=.--.-. ...+.+ +++++....++.+= .+ ..+ +++...+-++ .
T Consensus 134 ~~e~~~~~a~~~~~-g~~~~K~Kvg~~--~d~~~v-~avR~~~~~~l~vD----aN--------~~~t~~~~A~~~~~-~ 196 (338)
T 3ijl_A 134 TPDVVRAKTKECAG-LFNILKVKLGRD--NDKEMI-ETIRSVTDLPIAVD----AN--------QGWKDRQYALDMIH-W 196 (338)
T ss_dssp CHHHHHHHHHHHHT-TCSSEEEECSSS--CHHHHH-HHHHTTCCCCEEEE----CT--------TCCCCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHh-cccEEEEecCcH--HHHHHH-HHHHhhcCCcEEEE----Cc--------CCCCCHHHHHHHHH-H
Confidence 56777777777766 888875432221 233333 45554322222221 11 134 2544433332 3
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+ ++.++..|-...+ ++.+.++.++-.|. ..|=|.++...+.++. ..++++|+..+-.-. ....+
T Consensus 197 l~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~d~i~~k~~~~GGit~~~~ 265 (338)
T 3ijl_A 197 LKEK-----GIVMIEQPMPKEQ----LDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAFTGINIKLMKCTGMREAWK 265 (338)
T ss_dssp HHHT-----TEEEEECCSCTTC----HHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTBSEEEECHHHHTSHHHHHH
T ss_pred HhhC-----CCCEEECCCCCCc----HHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhCCEEEecccccCCHHHHHH
Confidence 4444 5678887755444 45566777664443 5566667776666554 456777776544321 11277
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 266 ia~~A~~~gi~~~~~~~~es~ 286 (338)
T 3ijl_A 266 MVTLAHALGMRVMVGCMTETS 286 (338)
T ss_dssp HHHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHHcCCEEEecCCcccH
Confidence 899999999999988776544
No 214
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=37.94 E-value=34 Score=29.52 Aligned_cols=107 Identities=10% Similarity=0.159 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
+..+++|+..-+.|+ .+|+|. -+++.+-.+++- .+. -+|.|.......-+ .+++-++...+.+. ++
T Consensus 178 ~~G~~vV~emnrlGm-ivDlSH-----~s~~~~~dvl~~-s~~-PviaSHSn~ral~~---h~RNl~De~l~~la---~~ 243 (369)
T 1itu_A 178 PFGQRVVKELNRLGV-LIDLAH-----VSVATMKATLQL-SRA-PVIFSHSSAYSVCA---SRRNVPDDVLRLVK---QT 243 (369)
T ss_dssp HHHHHHHHHHHHHTC-EEECTT-----BCHHHHHHHHHH-CSS-CCEESSCCBTTTSC---CTTSBCHHHHHHHH---HH
T ss_pred HhHHHHHHHHHHcCC-EEEcCC-----CCHHHHHHHHHh-cCC-CEEEeCCChhhcCC---CCCCCCHHHHHHHH---Hc
Confidence 568899999999998 999997 578888888883 333 46677766543211 11222333333333 22
Q ss_pred cCCCceeEEEee---cCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 122 LDVEYIDLYYQH---RVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 122 Lg~d~iDl~~lh---~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
=| .|-+.+.. .++....++++++.++.+++..=+.+||+.+
T Consensus 244 GG--vigv~~~~~fl~~~~~~t~~~~~~hi~hi~~~~G~dhVgiGs 287 (369)
T 1itu_A 244 DS--LVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGG 287 (369)
T ss_dssp TC--EEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECC
T ss_pred CC--eEEEEechhhcCCCCCCCHHHHHHHHHHHHHhhCCCeEEECC
Confidence 22 22222211 1123346888999999998887789999865
No 215
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=37.79 E-value=3.2 Score=28.76 Aligned_cols=41 Identities=15% Similarity=0.350 Sum_probs=31.2
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~ 235 (249)
..+++.|+++||+|+-..||+.-+...-...+.+|++.+..
T Consensus 45 ~~I~~~A~e~gVPi~e~~~LAr~L~~~~~ig~~IP~ely~a 85 (97)
T 3t7y_A 45 KRIIAEAEKYGVPIMRNVPLAHQLLDEGKELKFIPETTYEA 85 (97)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHHHHCCBTSBCCHHHHHH
T ss_pred HHHHHHHHHcCCeEEECHHHHHHHHHcCCCCCccCHHHHHH
Confidence 77999999999999999999988873333444566655443
No 216
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=37.70 E-value=1.9e+02 Score=24.51 Aligned_cols=142 Identities=17% Similarity=0.176 Sum_probs=76.5
Q ss_pred CCCHHHHHHHHH-------HHHHcCCCeEeC--C-----------------CCcCCCchHH---HHH---HHHHcCCCCC
Q 025707 38 PLSEEDGISIIK-------HAFSKGITFFDT--A-----------------DKYGPYTNEI---LLG---KALKELPREN 85 (249)
Q Consensus 38 ~~~~~~~~~~l~-------~A~~~Gi~~~Dt--a-----------------~~Yg~g~se~---~lg---~~l~~~~r~~ 85 (249)
+++.++..++++ .|.++|+..++. + ..|| |.-|. .+- +++++.-.++
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVr~avg~d 225 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYG-GSFDNRSRFLLETLAAVREVWPEN 225 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccC-cCHHHHHHHHHHHHHHHHHHcCCC
Confidence 357777776664 466889999874 2 2354 23332 222 3333333345
Q ss_pred eEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEee-cCCCC--CCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQH-RVDTS--VPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh-~~~~~--~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
+-|.-|+......++. ..+.+.. ..+-+.|+..|+|+|++-.-. .+... ..-...++.++++++.=.+--|++
T Consensus 226 ~pV~vRis~~~~~~~G---~~~~~~~-~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~ 301 (363)
T 3l5l_A 226 LPLTARFGVLEYDGRD---EQTLEES-IELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSA 301 (363)
T ss_dssp SCEEEEEEEECSSSCH---HHHHHHH-HHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEEC
T ss_pred ceEEEEecchhcCCCC---CCCHHHH-HHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEe
Confidence 6677787653211000 0112222 235566788898888776421 11100 000012344455555445677777
Q ss_pred CCC-CHHHHHHHhhcCCceEEee
Q 025707 163 SEA-SPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 163 s~~-~~~~l~~~~~~~~~~~~q~ 184 (249)
... +++..+++++....+.+++
T Consensus 302 GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 302 WGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp SSTTSHHHHHHHHHTTSCSEEEC
T ss_pred CCCCCHHHHHHHHHCCCccEEEe
Confidence 775 6888999888877777776
No 217
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=37.35 E-value=1.7e+02 Score=24.49 Aligned_cols=128 Identities=17% Similarity=0.168 Sum_probs=77.4
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEE-eecCCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYY-QHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~-lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
..+.++..+.... .....+...+...+++.+++.--+.+ +.-.....+.+.+.+.+++|++.|. .|.+
T Consensus 162 ~~~~~svnls~~~---------l~~~~~~~~~~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~Lr~~G~--~ial 230 (340)
T 4hjf_A 162 GNLTVSVNLSTGE---------IDRPGLVADVAETLRVNRLPRGALKLEVTESDIMRDPERAAVILKTLRDAGA--GLAL 230 (340)
T ss_dssp CCCEEEEECCTTC---------TTCTTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHTSHHHHHHHHHHHHHHTC--EEEE
T ss_pred CCceeEEEcChHh---------hcCchHHHHHHHHHHhhCCCcceEEEEeeccccccchHHHHHHHHHHHHcCC--Cccc
Confidence 4566666554332 22334667788888888875322221 1111112456778899999999998 5555
Q ss_pred CCCCH--HHHHHHhhcCCceEEeeecCcccc--------chhhhHHHHHHHhCCcEEecc---------------cCccc
Q 025707 163 SEASP--DTIRRAHAVHPITAVQLEWSLWAR--------DIENEIVPLCRELGIGIVPYC---------------PLGRG 217 (249)
Q Consensus 163 s~~~~--~~l~~~~~~~~~~~~q~~~n~~~~--------~~~~~~~~~~~~~gi~v~a~s---------------pl~~G 217 (249)
.+|.. ..+.. +...+++.+=++-+++.. ..-..+++.|++.|+.|+|=. .+.||
T Consensus 231 DDFGtG~ssl~~-L~~lp~d~iKID~sfv~~~~~~~~~~~iv~~ii~la~~lg~~vvAEGVEt~~q~~~L~~lG~d~~QG 309 (340)
T 4hjf_A 231 DDFGTGFSSLSY-LTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEGVENAEMAHALQSLGCDYGQG 309 (340)
T ss_dssp ECTTSSSCGGGT-GGGSCCSEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHTTCCEEES
T ss_pred cCCCCCcchHHH-HHhCCCChhcccHHhhhcccCCHhHHHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHcCCCEeec
Confidence 54432 11222 233567777665544321 112678899999999999844 36789
Q ss_pred ccCCCC
Q 025707 218 FFGGKA 223 (249)
Q Consensus 218 ~l~g~~ 223 (249)
++.+++
T Consensus 310 y~~~~P 315 (340)
T 4hjf_A 310 FGYAPA 315 (340)
T ss_dssp TTTCCS
T ss_pred CccccC
Confidence 998885
No 218
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=37.23 E-value=1.6e+02 Score=23.71 Aligned_cols=102 Identities=13% Similarity=0.061 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
+.+.+.+..++.. .-|.|.||+-. .. ...+-++-++.+-..+++-.=--|.+-+++++.++++++...=...-+..
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~-~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdv 98 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GP-AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINST 98 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEE
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CC-CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEEC
Confidence 4566666555555 57999999986 11 12233333333333333311125778899999999998872111222333
Q ss_pred CccccchhhhHHHHHHHhCCcEEeccc
Q 025707 187 SLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 187 n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
|.. .....++++.+++.|++++.+..
T Consensus 99 s~~-~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 99 NAE-REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp CSC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCC-cccHHHHHHHHHHhCCcEEEEcC
Confidence 433 21114799999999999998765
No 219
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=36.87 E-value=2.1e+02 Score=24.88 Aligned_cols=135 Identities=15% Similarity=0.017 Sum_probs=81.5
Q ss_pred hHHHHHHHHHcC-CCCCeEEEecccccccC-Ccccc---cCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHH
Q 025707 70 NEILLGKALKEL-PRENIQVATKFGFVELG-FTSVI---VKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEET 144 (249)
Q Consensus 70 se~~lg~~l~~~-~r~~~~I~tK~~~~~~~-~~~~~---~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~ 144 (249)
+.+.+-+++++. -.+++.|.--....... .+... ..++++...+-+++.++.++ ++++..|-...+
T Consensus 220 ~l~~i~~Air~aGy~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~-----i~~IEdPl~~dD---- 290 (417)
T 3qn3_A 220 PIDLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYP-----ICSIEDGLAEND---- 290 (417)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSC-----EEEEESSSCTTC----
T ss_pred HHHHHHHHHHHcCCCCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhcc-----eeEEecCCCccc----
Confidence 344555777764 22577777654321000 00000 12457777666776677654 688888866554
Q ss_pred HHHHHHHHHc-C-CeeEEEc-CCCC-HHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 145 IGEMKKLVEE-G-KIKYIGL-SEAS-PDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 145 ~~~l~~l~~~-G-~ir~iGv-s~~~-~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
|+.+.+|.++ | .|.-+|= +.++ +..+.++++....+++|+..|-.-. ....++.+.|+++|+.++....
T Consensus 291 ~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~ 364 (417)
T 3qn3_A 291 FEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHR 364 (417)
T ss_dssp HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 4445555544 3 4544442 3344 8899999888888899987665432 1127899999999999875443
No 220
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=35.95 E-value=61 Score=28.75 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=50.9
Q ss_pred HHHHHHHHHcC-Ce-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 145 IGEMKKLVEEG-KI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 145 ~~~l~~l~~~G-~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
++.+.+|+++- .+ -..|=+.++...+.++++...++++|+..+-.-. ....++.+.|+++|+.+....+
T Consensus 256 ~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~~H~~ 327 (455)
T 3fxg_A 256 TDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVVPHAS 327 (455)
T ss_dssp GGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTTSSCHHHHHHHHHHHHTTTCCBCCCSC
T ss_pred HHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEecch
Confidence 55666676653 23 4567788888899999888889999998765432 1227799999999999986654
No 221
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=35.92 E-value=1.7e+02 Score=24.95 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHH-----------------HHc--CCCCCeEEEecccccccCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKA-----------------LKE--LPRENIQVATKFGFVELGF 99 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~-----------------l~~--~~r~~~~I~tK~~~~~~~~ 99 (249)
.+.+....+.+++-+.|+.+|=|.-... +-..+-+. |+. .....++++|=.
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~---svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGm------- 144 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEE---SVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAG------- 144 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTT-------
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHH---HHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCC-------
Confidence 5778888899999999999886654321 22222211 111 234555555532
Q ss_pred cccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCC-CHHH-HHHHHHHHHHcC-CeeEEEcCCCCH
Q 025707 100 TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIEE-TIGEMKKLVEEG-KIKYIGLSEASP 167 (249)
Q Consensus 100 ~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~-~~~~-~~~~l~~l~~~G-~ir~iGvs~~~~ 167 (249)
.+.+.+..+++-.++. |. ++.++|+..... +.++ -+.++..|++.= .+ -||.|.|+.
T Consensus 145 ------stl~Ei~~Ave~i~~~-g~---~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~l-pVG~SdHt~ 204 (350)
T 3g8r_A 145 ------ARREDIDKVVSFMLHR-GK---DLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGV-RIGYSTHED 204 (350)
T ss_dssp ------CCHHHHHHHHHHHHTT-TC---CEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTS-EEEEEECCC
T ss_pred ------CCHHHHHHHHHHHHHc-CC---CEEEEecCCCCCCCcccCCHHHHHHHHHHCCCC-CEEcCCCCC
Confidence 2578888888877664 53 789999875532 2222 355566666542 22 389998874
No 222
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=35.85 E-value=2e+02 Score=24.20 Aligned_cols=89 Identities=10% Similarity=0.166 Sum_probs=54.7
Q ss_pred HHcCCCceeEEEee-cCCC-CCCHHHHHHHHHHHHHcCCeeEEEcC-----CCCHHHHHHHhhcC-C--ceEEeeecCcc
Q 025707 120 RRLDVEYIDLYYQH-RVDT-SVPIEETIGEMKKLVEEGKIKYIGLS-----EASPDTIRRAHAVH-P--ITAVQLEWSLW 189 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh-~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs-----~~~~~~l~~~~~~~-~--~~~~q~~~n~~ 189 (249)
+..|.|.||+-.-- +|+. ....++..+.++.+.+.-.+ -|-+- +++++.++++++.. . ..++-+. .-
T Consensus 91 ~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~--~~ 167 (323)
T 4djd_D 91 AEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAE--QE 167 (323)
T ss_dssp HTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEB--TT
T ss_pred HHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECC--cc
Confidence 78899999986553 3432 24556666666666654211 24444 55667788887763 1 2333322 21
Q ss_pred ccchhhhHHHHHHHhCCcEEecccC
Q 025707 190 ARDIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 190 ~~~~~~~~~~~~~~~gi~v~a~spl 214 (249)
+ ..++++.|++.|.+|+.+.|.
T Consensus 168 --~-~~~m~~laa~~g~~vVlmh~~ 189 (323)
T 4djd_D 168 --N-YKSLTAACMVHKHNIIARSPL 189 (323)
T ss_dssp --B-CHHHHHHHHHHTCEEEEECSS
T ss_pred --c-HHHHHHHHHHhCCeEEEEccc
Confidence 1 257889999999999998873
No 223
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=35.32 E-value=1.8e+02 Score=23.98 Aligned_cols=71 Identities=10% Similarity=-0.058 Sum_probs=42.4
Q ss_pred HHHHHHHHHHc--CCeeEEEcCCC--------CHHHHHHHhhcCCceEEeeecCc---------cccchhhhHHHHHHHh
Q 025707 144 TIGEMKKLVEE--GKIKYIGLSEA--------SPDTIRRAHAVHPITAVQLEWSL---------WARDIENEIVPLCREL 204 (249)
Q Consensus 144 ~~~~l~~l~~~--G~ir~iGvs~~--------~~~~l~~~~~~~~~~~~q~~~n~---------~~~~~~~~~~~~~~~~ 204 (249)
..+.+.++.++ +++..+|+-.. ..+.++++.+..++..+.+..+. ++......+++.|.++
T Consensus 92 ~N~~~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~ 171 (350)
T 2gwg_A 92 CNELCYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVEL 171 (350)
T ss_dssp HHHHHHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHc
Confidence 44556666554 45555665432 23567777655555555553221 1222237899999999
Q ss_pred CCcEEecccC
Q 025707 205 GIGIVPYCPL 214 (249)
Q Consensus 205 gi~v~a~spl 214 (249)
|+.|+....-
T Consensus 172 ~lpv~iH~~~ 181 (350)
T 2gwg_A 172 EIPAMIHVST 181 (350)
T ss_dssp TCCEEECCCC
T ss_pred CCeEEECCCC
Confidence 9999976543
No 224
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=35.22 E-value=50 Score=25.84 Aligned_cols=76 Identities=16% Similarity=-0.031 Sum_probs=47.7
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHH
Q 025707 35 YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (249)
Q Consensus 35 ~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~ 114 (249)
.|.+..++....++++|-+.||+.+=.|...| . .--++++.. .+++++.|.-.-...+ ....+.+.
T Consensus 31 ~G~eNT~~tl~la~era~e~~Ik~iVVASssG--~---TA~k~~e~~-~~~lVvVTh~~GF~~p--------g~~e~~~e 96 (206)
T 1t57_A 31 PGKENTERVLELVGERADQLGIRNFVVASVSG--E---TALRLSEMV-EGNIVSVTHHAGFREK--------GQLELEDE 96 (206)
T ss_dssp CSGGGHHHHHHHHHHHHHHHTCCEEEEECSSS--H---HHHHHHTTC-CSEEEEECCCTTSSST--------TCCSSCHH
T ss_pred CCcccHHHHHHHHHHHHHHcCCCEEEEEeCCC--H---HHHHHHHHc-cCCEEEEeCcCCCCCC--------CCCcCCHH
Confidence 44555778888888889999999999998888 2 222333323 3377777765322211 12223355
Q ss_pred HHHHHHHcCC
Q 025707 115 CEASLRRLDV 124 (249)
Q Consensus 115 ~~~sL~~Lg~ 124 (249)
..+-|++.|+
T Consensus 97 ~~~~L~~~G~ 106 (206)
T 1t57_A 97 ARDALLERGV 106 (206)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhCCC
Confidence 6777888886
No 225
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=35.13 E-value=19 Score=32.33 Aligned_cols=22 Identities=18% Similarity=0.327 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHcCCCeEeCCC
Q 025707 42 EDGISIIKHAFSKGITFFDTAD 63 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~ 63 (249)
-....+++.|+++|++++|||.
T Consensus 94 ~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 94 ISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SCHHHHHHHHHHHTCEEEESSC
T ss_pred ccCHHHHHHHHHcCCCEEECCC
Confidence 3467899999999999999994
No 226
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=34.76 E-value=1.1e+02 Score=25.70 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTAD 63 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~ 63 (249)
++.++..++++...++|+..|+...
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~ 49 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGF 49 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 3567788888888899999999864
No 227
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=34.67 E-value=6.5 Score=28.42 Aligned_cols=41 Identities=20% Similarity=0.367 Sum_probs=32.4
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~ 235 (249)
..+++.|+++||+|+-.-||+.-+...-...+.+|+..+..
T Consensus 74 ~~I~~~A~e~~VPi~e~~~LAr~Ly~~~~ig~~IP~ely~a 114 (123)
T 2jli_A 74 QTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEA 114 (123)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHHHHCCTTSBCCGGGHHH
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHHHHhCCCCCccCHHHHHH
Confidence 77999999999999999999988873333445677766654
No 228
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=34.65 E-value=3.9 Score=28.34 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=31.0
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~ 235 (249)
..+++.|+++||+|+-..||+.-+...-...+.+|+..+..
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr~Ly~~~~ig~~IP~ely~a 70 (98)
T 3c01_E 30 LAVRAYAEKVGVPVIVDIKLARSLFKTHRRYDLVSLEEIDE 70 (98)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHHHHCCTTCBCCHHHHHH
T ss_pred HHHHHHHHHcCCCeecCHHHHHHHHHhCCCCCccCHHHHHH
Confidence 78999999999999999999988873333344566655443
No 229
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=34.10 E-value=6.8 Score=28.89 Aligned_cols=42 Identities=19% Similarity=0.254 Sum_probs=33.3
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCccccc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVC 236 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~ 236 (249)
..+++.|+++||+|+-.-||+.-+...-.....+|+..|.+.
T Consensus 84 ~~I~e~A~e~gVPi~e~~~LAr~Ly~~~~ig~~IP~ely~aV 125 (137)
T 3bzs_A 84 LQIIKLAELYDIPVIEDIPLARSLYKNIHKGQYITEDFFEPV 125 (137)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHHHHSCTTCBCCGGGHHHH
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHHHHhCCCCCccCHHHHHHH
Confidence 779999999999999999999888744444466777666553
No 230
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=33.93 E-value=6.9 Score=29.13 Aligned_cols=42 Identities=19% Similarity=0.354 Sum_probs=33.2
Q ss_pred hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCccccc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVC 236 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~ 236 (249)
..+++.|+++||+|+-.-||+.-+...-.....+|+..|.+.
T Consensus 83 ~~I~e~A~e~gVPi~e~~~LAr~Ly~~~~ig~~IP~ely~aV 124 (144)
T 2jlj_A 83 QTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEAT 124 (144)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHHHHCCTTSBCCGGGHHHH
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHHHHhCCCCCccCHHHHHHH
Confidence 779999999999999999999888744434456777666553
No 231
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=33.85 E-value=2.3e+02 Score=24.42 Aligned_cols=57 Identities=12% Similarity=-0.010 Sum_probs=33.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCH-HHHHHHHHHHHHcCCeeEEEcCC
Q 025707 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPI-EETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~-~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
..+.+.+.+.++...+..|+.. +.+..-++.... +.+.+.++.+++.+.++.|.+++
T Consensus 144 ~ls~eei~~~i~~i~~~~gi~~---V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i~T 201 (416)
T 2a5h_A 144 SMPMERIDKAIDYIRNTPQVRD---VLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGS 201 (416)
T ss_dssp BCCHHHHHHHHHHHHTCTTCCE---EEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCCcE---EEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEEEe
Confidence 4577888887776555466544 344443333222 23566667777766666666654
No 232
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=33.71 E-value=1.7e+02 Score=25.09 Aligned_cols=101 Identities=13% Similarity=0.138 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
+.+...+++. .|.+-|.|.+++= -| .++..+++.+.++.=.|--++=-.|+...+.++++. .++. +..
T Consensus 44 D~~atv~Qi~-~l~~aG~diVRva---vp-----~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~-G~dk--lRI 111 (366)
T 3noy_A 44 DVEATLNQIK-RLYEAGCEIVRVA---VP-----HKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEK-GVHG--IRI 111 (366)
T ss_dssp CHHHHHHHHH-HHHHTTCCEEEEE---CC-----SHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHT-TCSE--EEE
T ss_pred CHHHHHHHHH-HHHHcCCCEEEeC---CC-----ChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHh-CCCe--EEE
Confidence 4455555554 3567788877762 22 356678899998886666666666888777776664 2333 333
Q ss_pred Cc---cccchhhhHHHHHHHhCCcEEe---cccCccccc
Q 025707 187 SL---WARDIENEIVPLCRELGIGIVP---YCPLGRGFF 219 (249)
Q Consensus 187 n~---~~~~~~~~~~~~~~~~gi~v~a---~spl~~G~l 219 (249)
|+ -......++++.|+++|+++-. +..|...++
T Consensus 112 NPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll 150 (366)
T 3noy_A 112 NPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLL 150 (366)
T ss_dssp CHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHH
T ss_pred CCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHH
Confidence 33 2222227899999999998753 555544433
No 233
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=33.61 E-value=2e+02 Score=23.76 Aligned_cols=101 Identities=11% Similarity=0.006 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH-----cCCeeEEEcCCCCHHHHHHHhhcC-Cc
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE-----EGKIKYIGLSEASPDTIRRAHAVH-PI 179 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~-----~G~ir~iGvs~~~~~~l~~~~~~~-~~ 179 (249)
.+++.+.+..++.. .-|.|.||+-. .....+-++.++.+-.+.+ .+. -|-+-+++++.++++++.. +.
T Consensus 34 ~~~~~a~~~A~~~v-~~GAdiIDIg~---g~~~v~~~eem~rvv~~i~~~~~~~~v--pisIDT~~~~V~eaaL~~~~Ga 107 (300)
T 3k13_A 34 KKYDEALSIARQQV-EDGALVIDVNM---DDGLLDARTEMTTFLNLIMSEPEIARV--PVMIDSSKWEVIEAGLKCLQGK 107 (300)
T ss_dssp TCHHHHHHHHHHHH-HTTCSEEEEEC---CCTTSCHHHHHHHHHHHHHTCHHHHTS--CEEEECSCHHHHHHHHHHCSSC
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEECC---CCCCCCHHHHHHHHHHHHHHhhhcCCC--eEEEeCCCHHHHHHHHHhcCCC
Confidence 34565555555544 57999999987 1222333343443333333 222 4788889999999999852 22
Q ss_pred eEEeeecCccccch-hhhHHHHHHHhCCcEEeccc
Q 025707 180 TAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 180 ~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~sp 213 (249)
.+-++.|...... ..++++.+++.|.+|+.+.-
T Consensus 108 -~iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 108 -SIVNSISLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp -CEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred -CEEEeCCcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 2334444443221 14799999999999998764
No 234
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=33.10 E-value=96 Score=26.91 Aligned_cols=100 Identities=10% Similarity=0.008 Sum_probs=56.6
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHH-HHHHcCCeeEEEcCCCCHHHHHHHhhc-CCceEEeeecCcccc
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMK-KLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWSLWAR 191 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~-~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~n~~~~ 191 (249)
++...+..+ +..=|-+++..+.. ......+. .+...| ++.+-+...+++.+++++.. .+..++..+.|+.-.
T Consensus 109 Ai~~al~al-~~~Gd~Vi~~~~~y----~~~~~~~~~~~~~~G-~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~ 182 (430)
T 3ri6_A 109 AISTAILTL-ARAGDSVVTTDRLF----GHTLSLFQKTLPSFG-IEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQ 182 (430)
T ss_dssp HHHHHHHHH-CCTTCEEEEETTCC----HHHHHHHHTHHHHTT-CEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred HHHHHHHHH-hCCCCEEEEcCCCc----hhHHHHHHHHHHHcC-CEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCe
Confidence 344444443 22336666655432 23334333 223333 33444444478888887753 334455556666443
Q ss_pred ch-hhhHHHHHHHhCCcEEecccCccccc
Q 025707 192 DI-ENEIVPLCRELGIGIVPYCPLGRGFF 219 (249)
Q Consensus 192 ~~-~~~~~~~~~~~gi~v~a~spl~~G~l 219 (249)
.. ..++.+.|+++|+.++.=..++.|.+
T Consensus 183 ~~dl~~i~~la~~~g~~livD~a~~~~~~ 211 (430)
T 3ri6_A 183 VADLEALSKVVHAKGIPLVVDTTMTPPYL 211 (430)
T ss_dssp CCCHHHHHHHHHTTTCCEEEECTTSCTTT
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 22 37899999999999998777776655
No 235
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=32.56 E-value=2.2e+02 Score=23.88 Aligned_cols=155 Identities=12% Similarity=0.069 Sum_probs=83.2
Q ss_pred HHHHHHHHHHcCCCeEeCC--C----CcCCCchHHHHHHHHHcCC--CCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 44 GISIIKHAFSKGITFFDTA--D----KYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 44 ~~~~l~~A~~~Gi~~~Dta--~----~Yg~g~se~~lg~~l~~~~--r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
+.+.++.+.+.||.+++.- | .+|- .-+..+-..++... +.+.-|..|+-... ....+++...+.+
T Consensus 83 ~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl-~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~------~R~~~~~~a~~~l 155 (343)
T 3rys_A 83 TRAYLERAAAGGVRHAEIMMDPQAHTSRGV-ALETCVNGVANALATSEEDFGVSTLLIAAF------LRDMSEDSALEVL 155 (343)
T ss_dssp HHHHHHHHHHTTEEEEEEEECHHHHHTTTC-CHHHHHHHHHHHHTTHHHHHSCEEEEEEEE------ETTSCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEecHHHhccCCC-CHHHHHHHHHHHHHHHhhcCceeEEEEEEe------CCCCCHHHHHHHH
Confidence 4566677778899999752 2 2331 23333332222211 11111222321111 1134577777777
Q ss_pred HHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-CHHHHHHHhhcCCceEEeeecCccccchh
Q 025707 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHAVHPITAVQLEWSLWARDIE 194 (249)
Q Consensus 116 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~~n~~~~~~~ 194 (249)
+..++ +. +.+.-+=+...+...+.+...+.++..++.|.-..+=.... +++.+.+++.....+-+-.-+.+.+ .
T Consensus 156 ~~a~~-~~-~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rIgHgv~l~~---d 230 (343)
T 3rys_A 156 DQLLA-MH-APIAGIGLDSAEVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVERIDHGIRCME---D 230 (343)
T ss_dssp HHHHH-TT-CCCCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCCSEEEECGGGGG---C
T ss_pred HHHHh-CC-CCEEEEecCCcccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCcceeeeeeeecC---C
Confidence 77776 32 33433334444444555667777888888887665544433 4566777666433333323233321 1
Q ss_pred hhHHHHHHHhCCcEEe
Q 025707 195 NEIVPLCRELGIGIVP 210 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a 210 (249)
.++++.++++||.+..
T Consensus 231 ~~l~~~l~~~~i~le~ 246 (343)
T 3rys_A 231 TDVVQRLVAEQVPLTV 246 (343)
T ss_dssp HHHHHHHHHHTCCEEE
T ss_pred hHHHHHHHhcCCCeeE
Confidence 5799999999999754
No 236
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=32.49 E-value=2.2e+02 Score=23.85 Aligned_cols=88 Identities=13% Similarity=0.006 Sum_probs=51.1
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc-CCceEEeeecCccccc-hhhhHHHHHHHhC
Q 025707 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWSLWARD-IENEIVPLCRELG 205 (249)
Q Consensus 128 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~n~~~~~-~~~~~~~~~~~~g 205 (249)
|-+++..+.. ..++..+..+.+.--++..-+...+++.+++++.. ....++..+.|+.-.- ...++.+.|+++|
T Consensus 106 d~Vi~~~~~y----~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g 181 (392)
T 3qhx_A 106 DHVVIPDDAY----GGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSS 181 (392)
T ss_dssp CEEEEETTCC----HHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHT
T ss_pred CEEEEeCCCc----chHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcC
Confidence 5555544432 23444444443332233344444578888887753 2334444455554221 2388999999999
Q ss_pred CcEEecccCccccc
Q 025707 206 IGIVPYCPLGRGFF 219 (249)
Q Consensus 206 i~v~a~spl~~G~l 219 (249)
+.++.=..++.+.+
T Consensus 182 ~~li~D~~~~~~~~ 195 (392)
T 3qhx_A 182 AKVLVDNTFASPAL 195 (392)
T ss_dssp CEEEEECTTTCTTT
T ss_pred CEEEEECCCccccc
Confidence 99998877765543
No 237
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=32.19 E-value=2.5e+02 Score=24.27 Aligned_cols=107 Identities=12% Similarity=0.077 Sum_probs=68.9
Q ss_pred HHHHHHHcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCCeeE---EEcCCCCHHHHHHHhhcCCceEEeeecCcc
Q 025707 115 CEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKY---IGLSEASPDTIRRAHAVHPITAVQLEWSLW 189 (249)
Q Consensus 115 ~~~sL~~Lg~d~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~---iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~ 189 (249)
+.+.|++.+++. +-+.+.-.+. ..+.+.+.+.++.|++.|---+ +|....+...+..+ +++.+=++-+++
T Consensus 129 l~~~l~~~~~~~-~~l~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ialDDFG~g~ssl~~L~~l----~~d~iKID~s~v 203 (431)
T 2bas_A 129 LLKEYEAKGIEL-HRFVLEITEHNFEGDIEQLYHMLAYYRTYGIKIAVDNIGKESSNLDRIALL----SPDLLKIDLQAL 203 (431)
T ss_dssp HHHHHHHTTCCG-GGEEEEECCTTCCSCHHHHHHHHHHHHTTTCEEEEEEETTTBCCHHHHHHH----CCSEEEEECTTT
T ss_pred HHHHHHHcCCCC-CeEEEEEECChhhCCHHHHHHHHHHHHHCCCEEEEECCCCCcHHHHHHHhC----CCCEEEECHHHH
Confidence 677788888643 2233333322 3567889999999999997333 34444455555544 455555555544
Q ss_pred cc--------chhhhHHHHHHHhCCcEEeccc---------------CcccccCCCCCCC
Q 025707 190 AR--------DIENEIVPLCRELGIGIVPYCP---------------LGRGFFGGKAVVE 226 (249)
Q Consensus 190 ~~--------~~~~~~~~~~~~~gi~v~a~sp---------------l~~G~l~g~~~~~ 226 (249)
.. .....+++.|++.|+.|++=.. +.+|++.+++.+.
T Consensus 204 ~~~~~~~~~~~il~~ii~la~~lg~~vvAEGVEt~~q~~~l~~lG~d~~QGy~f~~P~~~ 263 (431)
T 2bas_A 204 KVSQPSPSYEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRNGGRYFQGYYLVSPSET 263 (431)
T ss_dssp C----CCHHHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHTTEEEECSTTTCCCBSS
T ss_pred hhhhcCHhHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHcCCCEEeeCCcCCCCCc
Confidence 32 1126788999999999998654 7889999885543
No 238
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=31.97 E-value=2.5e+02 Score=24.33 Aligned_cols=140 Identities=17% Similarity=0.142 Sum_probs=73.8
Q ss_pred CCHHHHHHHHH-------HHHHcCCCeEeC--CC-----------------CcCCCch-H---HHHHHHHHc----C---
Q 025707 39 LSEEDGISIIK-------HAFSKGITFFDT--AD-----------------KYGPYTN-E---ILLGKALKE----L--- 81 (249)
Q Consensus 39 ~~~~~~~~~l~-------~A~~~Gi~~~Dt--a~-----------------~Yg~g~s-e---~~lg~~l~~----~--- 81 (249)
++.++..++++ .|.++|+..+|- |. .|| |.- | +.+-+.++. .
T Consensus 160 mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yG-Gs~lenR~Rf~~evv~aVr~~v~~~ 238 (419)
T 3l5a_A 160 MSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYG-ADSLKNRARLCLEVMRAVQEVIDKE 238 (419)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTS-TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCC-CchhhhhhHHHHHHHHHHHHHHhhh
Confidence 56677666654 467899999884 21 344 222 3 233333332 1
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH-cCCCceeEEEeec-----CCCCCCHHHHHHHHHHHHH--
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR-LDVEYIDLYYQHR-----VDTSVPIEETIGEMKKLVE-- 153 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~-Lg~d~iDl~~lh~-----~~~~~~~~~~~~~l~~l~~-- 153 (249)
..+++.|..|+.......+. ...+.+...+ +-+.|+. .|+|||++-.-.. ..........++..+.+++
T Consensus 239 ~~~~f~v~vRis~~~~~~~~--~G~~~ed~~~-la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v 315 (419)
T 3l5a_A 239 APDNFILGFRATPEETRGSD--LGYTIDEFNQ-LIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHL 315 (419)
T ss_dssp CCTTCEEEEEECSCEEETTE--EEECHHHHHH-HHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHH
T ss_pred cCCCeeEEEecccccccCCC--CCCCHHHHHH-HHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHc
Confidence 14578888898764311110 0123444433 4445556 8998877643211 0000000001223333443
Q ss_pred cCCeeEEEcCC-CCHHHHHHHhhcCCceEEee
Q 025707 154 EGKIKYIGLSE-ASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 154 ~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~ 184 (249)
.|.|--|++.. .+++..+++++. .+.+.+
T Consensus 316 ~~~iPVI~~GgI~t~e~Ae~~L~~--aDlVai 345 (419)
T 3l5a_A 316 AGRIPLIASGGINSPESALDALQH--ADMVGM 345 (419)
T ss_dssp TTSSCEEECSSCCSHHHHHHHGGG--CSEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHHh--CCcHHH
Confidence 24677888877 578888888876 666655
No 239
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=31.90 E-value=1.9e+02 Score=22.87 Aligned_cols=123 Identities=11% Similarity=0.124 Sum_probs=67.9
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
.++++-.++++.|++. |+.++|.=-.+- ..+..+.+.++. ....++++|..-+... .+.+.+.+-+
T Consensus 80 ~~~~~~~~ll~~~~~~~~~d~iDvEl~~~--~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~t---------p~~~el~~~~ 148 (238)
T 1sfl_A 80 FTNDSYLNLISDLANINGIDMIDIEWQAD--IDIEKHQRIITHLQQYNKEVIISHHNFEST---------PPLDELQFIF 148 (238)
T ss_dssp CCHHHHHHHHHHGGGCTTCCEEEEECCTT--SCHHHHHHHHHHHHHTTCEEEEEEEESSCC---------CCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEEccCC--CChHHHHHHHHHHHhcCCEEEEEecCCCCC---------cCHHHHHHHH
Confidence 4788899999999998 699999765441 023333322222 2355677776643221 1234454444
Q ss_pred HHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhh
Q 025707 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175 (249)
Q Consensus 116 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~ 175 (249)
++ ...+|.|.+=+... +....+...+++...++.+...+.-|++|.-..-.+-++..
T Consensus 149 ~~-~~~~gaDivKia~~--a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~ 205 (238)
T 1sfl_A 149 FK-MQKFNPEYVKLAVM--PHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQ 205 (238)
T ss_dssp HH-HHTTCCSEEEEEEC--CSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGGGHHHHHTG
T ss_pred HH-HHHcCCCEEEEEec--CCCHHHHHHHHHHHHHHhhcCCCCEEEEECCCCchHHHHHH
Confidence 43 34567655554444 22223333344444444333566678887776666666654
No 240
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=31.75 E-value=2.1e+02 Score=23.40 Aligned_cols=149 Identities=8% Similarity=0.005 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCC--chHHHHHHHHHc-----CCCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPY--TNEILLGKALKE-----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g--~se~~lg~~l~~-----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
.+...+.+..+++.+.. .|+.. .-++.+.+.+.. ...+++++++= .. +
T Consensus 42 ~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g---------------~~----~ 96 (391)
T 3dzz_A 42 APEIMASMEEKLKVAAF------GYESVPAEYYKAVADWEEIEHRARPKEDWCVFASG---------------VV----P 96 (391)
T ss_dssp CHHHHHHHHHHHTTCCC------CCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESC---------------HH----H
T ss_pred CHHHHHHHHHHHhcCcC------CCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCC---------------HH----H
Confidence 35666777777776532 23321 345566666654 23455655431 12 2
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC-CeeEEEc---CC---CCHHHHHHHhhcCCce--EEee
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGL---SE---ASPDTIRRAHAVHPIT--AVQL 184 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGv---s~---~~~~~l~~~~~~~~~~--~~q~ 184 (249)
++...+..+ ++.=|-+++..|... .....+ ...| .+..+-+ .+ .+++.+++++...+.. ++..
T Consensus 97 a~~~~~~~l-~~~gd~vl~~~~~~~----~~~~~~---~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~ 168 (391)
T 3dzz_A 97 AISAMVRQF-TSPGDQILVQEPVYN----MFYSVI---EGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCN 168 (391)
T ss_dssp HHHHHHHHH-SCTTCEEEECSSCCH----HHHHHH---HHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEES
T ss_pred HHHHHHHHh-CCCCCeEEECCCCcH----HHHHHH---HHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEEC
Confidence 233333333 223366776555331 122222 2233 3444443 12 6788999888643333 3333
Q ss_pred ecCcccc----chhhhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 185 EWSLWAR----DIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 185 ~~n~~~~----~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
+.|+.-. ....++.+.|+++|+.++.=...+.+...++
T Consensus 169 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 210 (391)
T 3dzz_A 169 PHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE 210 (391)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC
Confidence 4444321 2238899999999999998777765555553
No 241
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=31.51 E-value=2.4e+02 Score=24.02 Aligned_cols=134 Identities=12% Similarity=0.067 Sum_probs=75.5
Q ss_pred CCHHHHH--------HHHHHHH-HcCCCeEeC--------------------CCCcCCCchHH---HHHH---HHHc-CC
Q 025707 39 LSEEDGI--------SIIKHAF-SKGITFFDT--------------------ADKYGPYTNEI---LLGK---ALKE-LP 82 (249)
Q Consensus 39 ~~~~~~~--------~~l~~A~-~~Gi~~~Dt--------------------a~~Yg~g~se~---~lg~---~l~~-~~ 82 (249)
++.++.. +..+.|. ++|+..++. ...||...-|. .+-+ ++++ ..
T Consensus 163 lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg 242 (379)
T 3aty_A 163 LTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVG 242 (379)
T ss_dssp CCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcC
Confidence 5666666 4455667 899999983 34566202222 2222 2222 23
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCC---CCCCHHHHHHHHHHHHHcCCeeE
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD---TSVPIEETIGEMKKLVEEGKIKY 159 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~---~~~~~~~~~~~l~~l~~~G~ir~ 159 (249)
.+ . |.-|+........ .....+.+. -..+-+.|+..|+++|++ |... ...+. + +.++++.=.+--
T Consensus 243 ~~-~-v~vRis~~~~~~~-~~~~~~~~~-~~~la~~l~~~Gvd~i~v---~~~~~~~~~~~~----~-~~~ir~~~~iPv 310 (379)
T 3aty_A 243 SD-R-VGLRISPLNGVHG-MIDSNPEAL-TKHLCKKIEPLSLAYLHY---LRGDMVNQQIGD----V-VAWVRGSYSGVK 310 (379)
T ss_dssp GG-G-EEEEECTTCCGGG-CCCSCHHHH-HHHHHHHHGGGCCSEEEE---ECSCTTSCCCCC----H-HHHHHTTCCSCE
T ss_pred CC-e-EEEEECccccccc-CCCCCCHHH-HHHHHHHHHHhCCCEEEE---cCCCcCCCCccH----H-HHHHHHHCCCcE
Confidence 33 3 6778765321000 001122232 234556778888877665 4321 11111 4 566676656777
Q ss_pred EEcCCCCHHHHHHHhhcCCceEEee
Q 025707 160 IGLSEASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 160 iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (249)
|+....+++..+++++....+.+++
T Consensus 311 i~~G~it~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 311 ISNLRYDFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp EEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred EEECCCCHHHHHHHHHcCCCeEEEe
Confidence 8888888999999998877888887
No 242
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=31.31 E-value=2.9e+02 Score=24.87 Aligned_cols=49 Identities=6% Similarity=0.161 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCC----HHHHHHHHHHHHHcCC
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP----IEETIGEMKKLVEEGK 156 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~----~~~~~~~l~~l~~~G~ 156 (249)
-+.|++.+++-.++.|+|++=++...+-....+ ..+.+++|++..+++.
T Consensus 220 ve~ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~l~~ai~~~~ 272 (533)
T 1p1j_A 220 LQRIRRDIQNFKEENALDKVIVLWTANTERYVEVSPGVNDTMENLLQSIKNDH 272 (533)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEECSCCCCCCCCCTTTTSSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEeCcCccCCCCCccccccCHHHHHHHHhcCC
Confidence 467888889999999999977777766544433 3447888888777665
No 243
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=31.18 E-value=2.6e+02 Score=24.21 Aligned_cols=98 Identities=8% Similarity=-0.054 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEee
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (249)
++++...+-+ +.|+.+++++ +..|-... -++.+.++++.-.|- ..|=+-++...++++++...++++|+
T Consensus 239 ~~~~~A~~~~-~~L~~~~i~~-----iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~ 308 (426)
T 4e4f_A 239 LTPIEAARFG-KSVEDYRLFW-----MEDPTPAE----NQACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRT 308 (426)
T ss_dssp SCHHHHHHHH-HHTGGGCCSE-----EECCSCCS----SGGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred CCHHHHHHHH-HHHhhcCCCE-----EECCCChH----HHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 4454443322 3455666544 44554332 255667777664443 33446678888888888888899998
Q ss_pred ecCcccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 185 EWSLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 185 ~~n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
..+-.-. ....++.+.|+++|+.+...++
T Consensus 309 k~~~~GGit~~~~ia~~A~~~gi~v~~h~~ 338 (426)
T 4e4f_A 309 TITHAGGITGMRRIADFASLYQVRTGSHGP 338 (426)
T ss_dssp CTTTTTHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEeeeCC
Confidence 7765432 1127799999999999886654
No 244
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3
Probab=31.01 E-value=3e+02 Score=24.85 Aligned_cols=49 Identities=10% Similarity=0.162 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCC----HHHHHHHHHHHHHcCC
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP----IEETIGEMKKLVEEGK 156 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~----~~~~~~~l~~l~~~G~ 156 (249)
-+.|++.+++-.++-|+|++=++...+-+...+ ..+.+++|++..+++.
T Consensus 224 ve~ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~L~~ai~~~~ 276 (537)
T 1vko_A 224 LEHIRADIRKFKQEHELECVIVLWTANTERYTDVRQGLNATADEIMESIRVNE 276 (537)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEECSCCCCCCCCCTTTTSSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeCCCCcCCCCCccccccCHHHHHHHHhcCC
Confidence 467899999999999999977777766544433 3347888888877765
No 245
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=30.98 E-value=1.1e+02 Score=27.50 Aligned_cols=125 Identities=15% Similarity=0.178 Sum_probs=82.1
Q ss_pred HHHHHHcCCCeE--eCCCCcCC--------CchHHHHHHHHHc---CCCCCeEEEecccccccCCc---------ccccC
Q 025707 48 IKHAFSKGITFF--DTADKYGP--------YTNEILLGKALKE---LPRENIQVATKFGFVELGFT---------SVIVK 105 (249)
Q Consensus 48 l~~A~~~Gi~~~--Dta~~Yg~--------g~se~~lg~~l~~---~~r~~~~I~tK~~~~~~~~~---------~~~~~ 105 (249)
.+..-..|+.-+ =||-.|.. |.-|.++.-+-+. ..+..+|+++-++-.....+ ....+
T Consensus 118 f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~E 197 (557)
T 1uwk_A 118 FNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGSLKGKWVLTAGLGGMGGAQPLAATLAGACSLNIE 197 (557)
T ss_dssp HHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEE
Confidence 445566788766 36655542 4555555533332 46888999998876542210 11234
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc-CC--ceEE
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HP--ITAV 182 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~--~~~~ 182 (249)
.+++.|+ +|+.+.|+|.+ ..+++++++..++.+++|+..+||+-..-.+.++++.+. .. +..-
T Consensus 198 vd~~ri~-------~R~~~gyld~~-------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtD 263 (557)
T 1uwk_A 198 SQQSRID-------FRLETRYVDEQ-------ATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTD 263 (557)
T ss_dssp SCHHHHH-------HHHHTTSCCEE-------CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEECC
T ss_pred ECHHHHH-------HHHhCCCceeE-------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCC
Confidence 4555554 45667788764 245899999999999999999999999888888888776 33 3344
Q ss_pred eeec
Q 025707 183 QLEW 186 (249)
Q Consensus 183 q~~~ 186 (249)
|.+.
T Consensus 264 QTSa 267 (557)
T 1uwk_A 264 QTSA 267 (557)
T ss_dssp CSCT
T ss_pred Cccc
Confidence 5543
No 246
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=30.90 E-value=2.4e+02 Score=23.77 Aligned_cols=121 Identities=13% Similarity=0.118 Sum_probs=75.7
Q ss_pred CHHHHHHHHHHHHHc---CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK---GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~---Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
+.+...++++...+. =+-.+|.....+ .-...+-+.+ ....-++|.+|...... ....+.+.+.+.
T Consensus 55 ~~e~f~~~l~~i~~~~~~il~VvD~~d~~~--~~~~~l~~~~--~~~p~ilV~NK~DL~~~-------~~~~~~~~~~l~ 123 (368)
T 3h2y_A 55 TDDDFLRILNGIGKSDALVVKIVDIFDFNG--SWLPGLHRFV--GNNKVLLVGNKADLIPK-------SVKHDKVKHWMR 123 (368)
T ss_dssp -CHHHHHHHHHHHHSCCEEEEEEETTSHHH--HCCTTHHHHS--SSSCEEEEEECGGGSCT-------TSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCcEEEEEEECCCCcc--cHHHHHHHHh--CCCcEEEEEEChhcCCc-------ccCHHHHHHHHH
Confidence 456677777777643 234568764221 0001122222 24556888999875431 123566777777
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHH
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 172 (249)
..++..|....+++.+- ......++++++.+.++.+...|--+|-+|..-+.+..
T Consensus 124 ~~~~~~g~~~~~v~~iS-A~~g~gi~~L~~~l~~~~~~~~i~~vG~~nvGKStliN 178 (368)
T 3h2y_A 124 YSAKQLGLKPEDVFLIS-AAKGQGIAELADAIEYYRGGKDVYVVGCTNVGKSTFIN 178 (368)
T ss_dssp HHHHHTTCCCSEEEECC-TTTCTTHHHHHHHHHHHHTTSCEEEEEBTTSSHHHHHH
T ss_pred HHHHHcCCCcccEEEEe-CCCCcCHHHHHhhhhhhcccceEEEecCCCCChhHHHH
Confidence 77888886444666553 33446789999999988888899999999987765443
No 247
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=30.55 E-value=1.3e+02 Score=27.01 Aligned_cols=125 Identities=17% Similarity=0.131 Sum_probs=82.5
Q ss_pred HHHHHHcCCCeE--eCCCCcCC--------CchHHHHHHHHHc---CCCCCeEEEecccccccCCc---------ccccC
Q 025707 48 IKHAFSKGITFF--DTADKYGP--------YTNEILLGKALKE---LPRENIQVATKFGFVELGFT---------SVIVK 105 (249)
Q Consensus 48 l~~A~~~Gi~~~--Dta~~Yg~--------g~se~~lg~~l~~---~~r~~~~I~tK~~~~~~~~~---------~~~~~ 105 (249)
.+..-..|+.-+ =||-.|.. |.-|.++.-+-+. ..+..+|+++-++-.....+ ....+
T Consensus 114 f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~E 193 (552)
T 2fkn_A 114 FHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMGGAQPLSVTMNEGVVIAVE 193 (552)
T ss_dssp HHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEE
Confidence 445567788766 36655542 4555555533332 46888999998876542210 11233
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc-CCc--eEE
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPI--TAV 182 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~--~~~ 182 (249)
.+++.|+ +|+.+.|+|.+. .+++++++..++.+++|+..+||+-..-.+.++++.+. ..+ ..-
T Consensus 194 vd~~ri~-------~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtD 259 (552)
T 2fkn_A 194 VDEKRID-------KRIETKYCDRKT-------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVTD 259 (552)
T ss_dssp SCHHHHH-------HHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEECC
T ss_pred ECHHHHH-------HHHhCCcceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCC
Confidence 4555554 456677888742 45899999999999999999999999988999988876 333 344
Q ss_pred eeec
Q 025707 183 QLEW 186 (249)
Q Consensus 183 q~~~ 186 (249)
|.+.
T Consensus 260 QTSa 263 (552)
T 2fkn_A 260 QTSA 263 (552)
T ss_dssp CSCT
T ss_pred Cccc
Confidence 5543
No 248
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=30.36 E-value=1.3e+02 Score=26.96 Aligned_cols=105 Identities=19% Similarity=0.196 Sum_probs=70.4
Q ss_pred CchHHHHHHHHHc---CCCCCeEEEecccccccCCc---------ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecC
Q 025707 68 YTNEILLGKALKE---LPRENIQVATKFGFVELGFT---------SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV 135 (249)
Q Consensus 68 g~se~~lg~~l~~---~~r~~~~I~tK~~~~~~~~~---------~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~ 135 (249)
|.-|.++.-+-+. ..+..+|+++-++-.....+ ....+.+++.|+ +|+.+.|+|.+.
T Consensus 143 GTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~-------~R~~~gyld~~~---- 211 (551)
T 1x87_A 143 GTYETFAEVARQHFGGTLAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARIQ-------RRIDTNYLDTMT---- 211 (551)
T ss_dssp HHHHHHHHHHHHHSTTCCTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTSCSEEE----
T ss_pred cHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHH-------HHHhCCCceeEc----
Confidence 4455555422222 46788999998876543211 112344555554 456677888742
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc-CCc--eEEeeec
Q 025707 136 DTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPI--TAVQLEW 186 (249)
Q Consensus 136 ~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~--~~~q~~~ 186 (249)
.+++++++..++.+++|+..+||+-..-.+.++++.+. ..+ ..-|.+.
T Consensus 212 ---~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSa 262 (551)
T 1x87_A 212 ---DSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSA 262 (551)
T ss_dssp ---SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCT
T ss_pred ---CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccc
Confidence 45899999999999999999999999988988888876 333 3445543
No 249
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=30.35 E-value=53 Score=26.46 Aligned_cols=32 Identities=19% Similarity=0.460 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCch
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~s 70 (249)
.++++..++.+.|.++|..|+.|+-.|+.+.+
T Consensus 154 Lt~eei~~a~~ia~~aGADfVKTSTGf~~ggA 185 (239)
T 3ngj_A 154 LTNEEKVEVCKRCVAAGAEYVKTSTGFGTHGA 185 (239)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCCSSSSCCC
T ss_pred CCHHHHHHHHHHHHHHCcCEEECCCCCCCCCC
No 250
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=30.04 E-value=1.1e+02 Score=25.47 Aligned_cols=82 Identities=13% Similarity=0.132 Sum_probs=40.4
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCC
Q 025707 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGI 206 (249)
Q Consensus 128 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi 206 (249)
++.++..|-. + ++.+.+|.++-.| -..|=|.++...+.++++...++++|+..+..-. -.+.++.|+..|+
T Consensus 151 ~l~~iEqP~~--~----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik~~~~GG--it~~~~ia~~~gi 222 (327)
T 2opj_A 151 ELEYVEQPCA--T----VDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLGG--VRAALRLAEECGL 222 (327)
T ss_dssp CEEEEECCSS--S----HHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEECHHHHTS--HHHHHHHHHHTCS
T ss_pred CCcEEeCCCC--C----HHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCC--HHHHHHHHHHcCC
Confidence 4556655532 1 3455555544222 1223344455555555555556677775433221 2556788888999
Q ss_pred cEEecccCccc
Q 025707 207 GIVPYCPLGRG 217 (249)
Q Consensus 207 ~v~a~spl~~G 217 (249)
.++..+++.++
T Consensus 223 ~~~~~~~~es~ 233 (327)
T 2opj_A 223 PVVVSSAVETS 233 (327)
T ss_dssp CEEEBCCSCCH
T ss_pred cEEEcCCCcCH
Confidence 99888776544
No 251
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=30.00 E-value=1.2e+02 Score=20.38 Aligned_cols=59 Identities=7% Similarity=-0.005 Sum_probs=32.7
Q ss_pred CceeEEEeecCCCCCCHHHHHHHHHHHHHcC---CeeEEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEG---KIKYIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 125 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G---~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
..+|++++...-+... .++.++++++.. .+.-+-++..+.+.+.++....-.+++.-++
T Consensus 49 ~~~dlii~d~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~ 110 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLD---GLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPF 110 (132)
T ss_dssp TCCSEEEEESCBTTBC---HHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSC
T ss_pred cCCCEEEEecCCCCCC---HHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCC
Confidence 4578888876533333 345555566543 4555556665555666666554444444443
No 252
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=29.90 E-value=2.4e+02 Score=23.44 Aligned_cols=88 Identities=11% Similarity=0.061 Sum_probs=58.0
Q ss_pred HcCCCceeEEEee-cCCC-CCCHHHHHHHHHHHHHc-CCeeEEEc-CC----CCHHHHHHHhhcCCc-eEEeeecCcccc
Q 025707 121 RLDVEYIDLYYQH-RVDT-SVPIEETIGEMKKLVEE-GKIKYIGL-SE----ASPDTIRRAHAVHPI-TAVQLEWSLWAR 191 (249)
Q Consensus 121 ~Lg~d~iDl~~lh-~~~~-~~~~~~~~~~l~~l~~~-G~ir~iGv-s~----~~~~~l~~~~~~~~~-~~~q~~~n~~~~ 191 (249)
..|.|.||+-.-- .|+. ..+.++.++.++.+++. +. -|-+ -+ ++++.++++++...- ...-++.+..
T Consensus 85 ~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~v--plsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~-- 160 (310)
T 2h9a_B 85 EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDV--PLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD-- 160 (310)
T ss_dssp HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSS--CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT--
T ss_pred HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCc--eEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC--
Confidence 8899999998863 3433 25667777777777765 44 3455 55 777888888876321 1122222332
Q ss_pred chhhhHHHHHHHhCCcEEeccc
Q 025707 192 DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 192 ~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+ ..++++.|++.|.+++.+.+
T Consensus 161 ~-~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 161 N-YKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp T-HHHHHHHHHHHTCEEEEECS
T ss_pred c-cHHHHHHHHHhCCCEEEECh
Confidence 1 36789999999999999876
No 253
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=29.68 E-value=2.4e+02 Score=23.30 Aligned_cols=87 Identities=13% Similarity=0.151 Sum_probs=60.2
Q ss_pred HHcCCCceeEEEee-cC-----CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccch
Q 025707 120 RRLDVEYIDLYYQH-RV-----DTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI 193 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh-~~-----~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~ 193 (249)
..-|.|.||+---- +| +..+.++.+...++.+++++. -|.+-+++++.++++++...- .-+..|-. .
T Consensus 62 v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~--iINdVsg~-~-- 134 (294)
T 2dqw_A 62 VAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAH--LLNDVTGL-R-- 134 (294)
T ss_dssp HHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCS--EEECSSCS-C--
T ss_pred HHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCC--EEEECCCC-C--
Confidence 34589999998743 22 234556777888888887643 578899999999999987432 22333333 2
Q ss_pred hhhHHHHHHHhCCcEEeccc
Q 025707 194 ENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 194 ~~~~~~~~~~~gi~v~a~sp 213 (249)
..++++.+++.|++++.+..
T Consensus 135 d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 135 DERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp CHHHHHHHHHHTCEEEEECC
T ss_pred ChHHHHHHHHhCCCEEEEcC
Confidence 36899999999999998764
No 254
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=29.67 E-value=2.4e+02 Score=23.35 Aligned_cols=150 Identities=13% Similarity=0.007 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCC----CchHHHHHHHHHc-----CCC-CCeEEEecccccccCCcccccCCCHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGP----YTNEILLGKALKE-----LPR-ENIQVATKFGFVELGFTSVIVKGTPEY 110 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~----g~se~~lg~~l~~-----~~r-~~~~I~tK~~~~~~~~~~~~~~~s~~~ 110 (249)
.+...+.+..+++.+ ....|+. ..-++.+.+.+.. ... +++++++=
T Consensus 38 ~~~v~~a~~~~~~~~-----~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g------------------- 93 (410)
T 3e2y_A 38 PSYVKEELSKAAFID-----NMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVG------------------- 93 (410)
T ss_dssp CHHHHHHHHHHHTCG-----GGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESH-------------------
T ss_pred CHHHHHHHHHHHhCc-----cccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCC-------------------
Confidence 466677777777654 1223432 1345667777653 233 56766442
Q ss_pred HHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CCeeEEEcC--------------CCCHHHHHHHhh
Q 025707 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLS--------------EASPDTIRRAHA 175 (249)
Q Consensus 111 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs--------------~~~~~~l~~~~~ 175 (249)
..+++...+..+ ++.=|-+++..|... .....+ ... ..+..+-+. ..+.+.+++++.
T Consensus 94 ~~~a~~~~~~~~-~~~gd~vl~~~p~~~-~~~~~~------~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~ 165 (410)
T 3e2y_A 94 AYGSLFNSIQGL-VDPGDEVIIMVPFYD-CYEPMV------RMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS 165 (410)
T ss_dssp HHHHHHHHHHHH-CCTTCEEEEEESCCT-THHHHH------HHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC
T ss_pred cHHHHHHHHHHh-cCCCCEEEEeCCCch-hhHHHH------HHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC
Confidence 123333334444 223365666655442 222222 222 345555443 136677777654
Q ss_pred c-CCceEEeeecCcccc----chhhhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 176 V-HPITAVQLEWSLWAR----DIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 176 ~-~~~~~~q~~~n~~~~----~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
. .+..++..+.|+.-. ....++.+.|+++|+.++.=.........++
T Consensus 166 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 217 (410)
T 3e2y_A 166 SKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH 217 (410)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred CCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC
Confidence 3 223334444454322 1238899999999999998777765555554
No 255
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=29.67 E-value=2.6e+02 Score=23.68 Aligned_cols=69 Identities=12% Similarity=0.075 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCCceeEEEeecC-CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRV-DTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~-~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
..+-+.|+..|+|+|++-.-... ....+ ++.+.++++.=.+--|++...+++..+++++....+.+++-
T Consensus 253 ~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 253 TAAAALLNKHRIVYLHIAEVDWDDAPDTP----VSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp HHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHcCCCEEEEeCCCcCCCCCcc----HHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhc
Confidence 34566778889877766431110 11112 34556666665677888888889999999988778888873
No 256
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=29.46 E-value=3.2e+02 Score=24.73 Aligned_cols=84 Identities=13% Similarity=0.098 Sum_probs=52.1
Q ss_pred eeEEE--eecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-----------CCHHH-HHHHhhcCCceEEeeecCccccc
Q 025707 127 IDLYY--QHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-----------ASPDT-IRRAHAVHPITAVQLEWSLWARD 192 (249)
Q Consensus 127 iDl~~--lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-----------~~~~~-l~~~~~~~~~~~~q~~~n~~~~~ 192 (249)
+|+++ +|.+. ..+..+..+.+.++.+.|.+--+|=.. ...+. +..+.+.. ..+|++.+.+...
T Consensus 420 ~D~vI~svH~~~-~~~~~~~~~~~~~ai~~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g--~~lEIN~~~~r~~ 496 (578)
T 2w9m_A 420 LDYVVVSVHSNF-TLDAARQTERLIRAVSHPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANG--TVVEINANAARLD 496 (578)
T ss_dssp SSEEEEECCSCT-TSCHHHHHHHHHHHHTCSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT--CEEEEECSTTTCB
T ss_pred CCEEEEEeccCC-CCCHHHHHHHHHHHHhcCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCC--CEEEEECCCCCcC
Confidence 46666 78764 334566777778888889888887322 23343 33333332 3566665554333
Q ss_pred hhhhHHHHHHHhCCcEEecccC
Q 025707 193 IENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 193 ~~~~~~~~~~~~gi~v~a~spl 214 (249)
....+++.|++ |+.++.-|-.
T Consensus 497 ~~~~~~~~a~e-Gl~i~igSDA 517 (578)
T 2w9m_A 497 LDWREALRWRE-RLKFAINTDA 517 (578)
T ss_dssp SCHHHHHHHTT-TCCEEEECCC
T ss_pred cHHHHHHHHHc-CCEEEEECCC
Confidence 34789999999 9998765543
No 257
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=29.33 E-value=86 Score=26.51 Aligned_cols=83 Identities=17% Similarity=0.045 Sum_probs=49.8
Q ss_pred CchHHHHHHHHHcCCCCCeEEEeccccccc--C-CcccccCC----CHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCC
Q 025707 68 YTNEILLGKALKELPRENIQVATKFGFVEL--G-FTSVIVKG----TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP 140 (249)
Q Consensus 68 g~se~~lg~~l~~~~r~~~~I~tK~~~~~~--~-~~~~~~~~----s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~ 140 (249)
|..|+.+.++++...+.+-+|.-|.+.... + .....+.. +...--+..+..|++.|+-. .++...
T Consensus 235 g~~e~~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~~aGv~~--------v~~~~e 306 (334)
T 3mwd_B 235 GTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFV--------PRSFDE 306 (334)
T ss_dssp SSHHHHHHHHHHTTSCCSCEEEEEECTTCC----------------CGGGSHHHHHHHHHHTTCBC--------CSSGGG
T ss_pred ChHHHHHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCccHHHHHHHHHHcCCeE--------cCCHHH
Confidence 567777888888656788888899987654 1 11111111 11112236788899999732 333333
Q ss_pred H-HHHHHHHHHHHHcCCee
Q 025707 141 I-EETIGEMKKLVEEGKIK 158 (249)
Q Consensus 141 ~-~~~~~~l~~l~~~G~ir 158 (249)
+ +-+-..|++|+++|.|.
T Consensus 307 l~~~~~~~~~~l~~~~~~~ 325 (334)
T 3mwd_B 307 LGEIIQSVYEDLVANGVIV 325 (334)
T ss_dssp HHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHCCcEe
Confidence 4 33455688999999875
No 258
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=29.31 E-value=1.8e+02 Score=25.08 Aligned_cols=130 Identities=16% Similarity=0.116 Sum_probs=72.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcC---------C-----C----chHHHHHHHHHcCCCCCeEEEecccccccCCc
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYG---------P-----Y----TNEILLGKALKELPRENIQVATKFGFVELGFT 100 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg---------~-----g----~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~ 100 (249)
.+.+....+.++|-+.|+.+|=|.-.-. - + .+-.+|-+.- .....++++|=.
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va--~~gKPViLStGm-------- 167 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVA--RLNRPMIFSTAG-------- 167 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHH--TTCSCEEEECTT--------
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHH--hcCCeEEEECCC--------
Confidence 4678888888899999998885543221 0 0 0111121111 134445554432
Q ss_pred ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCC-CHHH-HHHHHHHHHHcC-CeeEEEcCCCCHH-H--HHHHh
Q 025707 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIEE-TIGEMKKLVEEG-KIKYIGLSEASPD-T--IRRAH 174 (249)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~-~~~~-~~~~l~~l~~~G-~ir~iGvs~~~~~-~--l~~~~ 174 (249)
.+.+.+..+++-.... |.+ ++.++|+..... +.++ -+.++..|++.= .+ -||+|+|+.. . ...+.
T Consensus 168 -----aTl~Ei~~Ave~i~~~-Gn~--~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~l-pVG~SdHt~G~~~~~~AAv 238 (385)
T 1vli_A 168 -----AEISDVHEAWRTIRAE-GNN--QIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEA-VIGFSDHSEHPTEAPCAAV 238 (385)
T ss_dssp -----CCHHHHHHHHHHHHTT-TCC--CEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTS-EEEEEECCSSSSHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHC-CCC--cEEEEeccCCCCCChhhcCHHHHHHHHHHcCCC-CEEeCCCCCCchHHHHHHH
Confidence 2577888888866543 543 789999875542 2222 355666666652 22 5799999854 2 22222
Q ss_pred hcCCceEEeeecCc
Q 025707 175 AVHPITAVQLEWSL 188 (249)
Q Consensus 175 ~~~~~~~~q~~~n~ 188 (249)
. .+.+++...+++
T Consensus 239 A-lGA~iIEkHftl 251 (385)
T 1vli_A 239 R-LGAKLIEKHFTI 251 (385)
T ss_dssp H-TTCSEEEEEBCS
T ss_pred H-cCCCEEEeCCCc
Confidence 2 344466666554
No 259
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=29.13 E-value=2.9e+02 Score=24.16 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=67.8
Q ss_pred HHHHHcCCCeEeCC-----CCcCCCchHHHHHHHHHc----CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 49 KHAFSKGITFFDTA-----DKYGPYTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 49 ~~A~~~Gi~~~Dta-----~~Yg~g~se~~lg~~l~~----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
..-+...+.++=|+ -.|| .|+-|-+++++ ...+=++|.|-.- ++-|-..++...
T Consensus 53 ~r~f~e~~~~~sT~l~E~d~VfG---g~~~L~~~I~~~~~~~~P~~I~V~tTC~--------------~e~IGdDi~~v~ 115 (458)
T 3pdi_B 53 VRHFREPVPLQTTAMDQVSSVMG---ADENVVEALKTICERQNPSVIGLLTTGL--------------SETQGCDLHTAL 115 (458)
T ss_dssp HHHHCSCCCCEECCCCTTTTSSC---SHHHHHHHHHHHHHHTCCSEEEEEECHH--------------HHTTCTTHHHHH
T ss_pred HhhcCCCcceeeecccccccccC---cHHHHHHHHHHHHHhcCCCEEEEECCcH--------------HHHhcCCHHHHH
Confidence 33444455444332 2466 46666667765 4455566666543 333445566666
Q ss_pred HHcCCC-----ceeEEEeecCCCCCCH----HHHHHHHHH-HHH---------cCCeeEE-EcCCCC--HHHHHHHhhcC
Q 025707 120 RRLDVE-----YIDLYYQHRVDTSVPI----EETIGEMKK-LVE---------EGKIKYI-GLSEAS--PDTIRRAHAVH 177 (249)
Q Consensus 120 ~~Lg~d-----~iDl~~lh~~~~~~~~----~~~~~~l~~-l~~---------~G~ir~i-Gvs~~~--~~~l~~~~~~~ 177 (249)
+++..+ .+.++.+|.|.-.-.. +.++++|-+ +.+ .++|.-| |..++. .+.+.++++..
T Consensus 116 ~~~~~~~~~~~~~pVi~v~tpgf~gs~~~G~~~a~~al~~~l~~~~~~~~~~~~~~VNii~G~~~~~~D~~eik~lL~~~ 195 (458)
T 3pdi_B 116 HEFRTQYEEYKDVPIVPVNTPDFSGCFESGFAAAVKAIVETLVPERRDQVGKRPRQVNVLCSANLTPGDLEYIAESIESF 195 (458)
T ss_dssp HHTTTSCCSCSCSCEEEECCCTTSSCHHHHHHHHHHHHHHHSSCSSSCTTCCCSSEEEEEECTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHhccccCCCeEEEeeCCCcCCchhHHHHHHHHHHHHHhhccccCcCCCCCCeEEEEeCCCCChHHHHHHHHHHHHc
Confidence 666654 4678999888765332 234444333 221 3578888 875543 35777788877
Q ss_pred CceEEee
Q 025707 178 PITAVQL 184 (249)
Q Consensus 178 ~~~~~q~ 184 (249)
.+.++.+
T Consensus 196 Gi~v~~~ 202 (458)
T 3pdi_B 196 GLRPLLI 202 (458)
T ss_dssp TCEEEEE
T ss_pred CCEEEEe
Confidence 7776654
No 260
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=29.11 E-value=2e+02 Score=24.02 Aligned_cols=98 Identities=13% Similarity=0.042 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEee-cCCCCCC----HHHHHHHHHHHHHc--CCeeEEEcCCCCHHHHHHHhhcCCce
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQH-RVDTSVP----IEETIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHAVHPIT 180 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh-~~~~~~~----~~~~~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (249)
.+.+.+..++ +-.-|.|.||+---- +|....+ ++.+...++.++++ +. -|.+-+++++.++++++...-
T Consensus 64 ~~~a~~~A~~-~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~v--pISIDT~~~~VaeaAl~aGa~- 139 (318)
T 2vp8_A 64 DAAARDAVHR-AVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQ--LISVDTWRAQVAKAACAAGAD- 139 (318)
T ss_dssp CHHHHHHHHH-HHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTC--EEEEECSCHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC--eEEEeCCCHHHHHHHHHhCCC-
Confidence 3444444433 334688999998653 2322222 23345556677665 43 578899999999999987322
Q ss_pred EEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 181 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
.-+..+-.. ..++++.+++.|++++.+..
T Consensus 140 -iINDVsg~~---d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 140 -LINDTWGGV---DPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp -EEEETTSSS---STTHHHHHHHHTCEEEEECC
T ss_pred -EEEECCCCC---chHHHHHHHHhCCCEEEECC
Confidence 223333332 36899999999999999863
No 261
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=29.04 E-value=2.5e+02 Score=23.36 Aligned_cols=95 Identities=11% Similarity=0.108 Sum_probs=54.3
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CCeeEEEcCCCCHHHHHHHhhc---CCceEEeeecCc
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAV---HPITAVQLEWSL 188 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~---~~~~~~q~~~n~ 188 (249)
-.+-+.|.++|+++|++-+ |.. ...-++.++++++. ..++..+++-.+...++.+.+. .+.+.+.+..+.
T Consensus 31 l~ia~~L~~~Gv~~IE~g~---p~~---~~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s~ 104 (325)
T 3eeg_A 31 IIVAKALDELGVDVIEAGF---PVS---SPGDFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIGS 104 (325)
T ss_dssp HHHHHHHHHHTCSEEEEEC---TTS---CHHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeC---CCC---CHhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEecc
Confidence 3455568899999999863 321 12345556666554 3466677766666677665554 233333332111
Q ss_pred ccc--------c------hhhhHHHHHHHhCCcEEeccc
Q 025707 189 WAR--------D------IENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 189 ~~~--------~------~~~~~~~~~~~~gi~v~a~sp 213 (249)
.+. . ...+.+++|+++|+.|.-..|
T Consensus 105 Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~ 143 (325)
T 3eeg_A 105 SDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE 143 (325)
T ss_dssp SHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 110 0 115789999999998754333
No 262
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=28.98 E-value=1.3e+02 Score=23.45 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=25.7
Q ss_pred cccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCC
Q 025707 19 LEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTAD 63 (249)
Q Consensus 19 ~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~ 63 (249)
+.+.++|+-++.+.. ..+ ..+.++.|-+.|+..++...
T Consensus 2 m~~~~lg~~~~~~~~----~~~---~~~~l~~~~~~G~~~vEl~~ 39 (275)
T 3qc0_A 2 MQVEGLSINLATIRE----QCG---FAEAVDICLKHGITAIAPWR 39 (275)
T ss_dssp CCCTTEEEEGGGGTT----TCC---HHHHHHHHHHTTCCEEECBH
T ss_pred CCcccceeeeeeccC----CCC---HHHHHHHHHHcCCCEEEecc
Confidence 345577887776522 123 44677888899999999764
No 263
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=28.94 E-value=2e+02 Score=22.18 Aligned_cols=151 Identities=12% Similarity=0.046 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHH------H
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS------C 114 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~------~ 114 (249)
+|.....++.|++.|...|++-=.- .+|...|...=.... .....+.+.+.+++ .
T Consensus 21 PENTl~Af~~A~~~G~d~iE~DV~l----------------T~Dg~lVv~HD~~l~---~g~v~~~t~~eL~~l~~~ipt 81 (224)
T 1vd6_A 21 KENTLESFRLALEAGLDGVELDVWP----------------TRDGVFAVRHDPDTP---LGPVFQVDYADLKAQEPDLPR 81 (224)
T ss_dssp CTTSHHHHHHHHHTTCSEEEEEEEE----------------CTTSCEEECSCSEET---TEEGGGSCHHHHHHHSTTCCB
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeE----------------ecCCcEEEECCCccC---CCChhhCCHHHHHhcCCCCCC
Confidence 4667889999999999999764211 122222222111100 01123456666654 4
Q ss_pred HHHHHHHcC-CCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCC-ceEEeee-------
Q 025707 115 CEASLRRLD-VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHP-ITAVQLE------- 185 (249)
Q Consensus 115 ~~~sL~~Lg-~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~q~~------- 185 (249)
+++.|+.+. -..+ .+.+.-=.......+..+.+.++.++ -..+=+++|+++.+..+.+..| +....+-
T Consensus 82 L~evl~~~~~~~~~-~l~iEiK~~~~~~~~~~~~v~~~l~~--~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~ 158 (224)
T 1vd6_A 82 LEEVLALKEAFPQA-VFNVELKSFPGLGEEAARRLAALLRG--REGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHSAL 158 (224)
T ss_dssp HHHHHGGGGTCTTC-EEEEEECCCTTSHHHHHHHHHHHTTT--CSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCCGGG
T ss_pred HHHHHHhhhccCCc-eEEEEECCCCCccHHHHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHCCCCCEEEEeccccHHH
Confidence 888888775 1122 12332111112222344444444443 3456688888888777655421 1111110
Q ss_pred -----cCcccc---chhhhHHHHHHHhCCcEEeccc
Q 025707 186 -----WSLWAR---DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 186 -----~n~~~~---~~~~~~~~~~~~~gi~v~a~sp 213 (249)
...+.. ....++++.++++|+.|.+|.+
T Consensus 159 ~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~wtv 194 (224)
T 1vd6_A 159 LPCLGVEAVHPHHALVTEEAVAGWRKRGLFVVAWTV 194 (224)
T ss_dssp GGGSCCSEEEEBGGGCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHcCCcEEecCcccCCHHHHHHHHHCCCEEEEEeC
Confidence 000111 1126799999999999999975
No 264
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=28.69 E-value=73 Score=27.61 Aligned_cols=88 Identities=18% Similarity=0.233 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHcCCeeEE---EcCCCCHHHHHHHhhcCCceEEeeecCcccc--------chhhhHHHHHHHhCCcEEe
Q 025707 142 EETIGEMKKLVEEGKIKYI---GLSEASPDTIRRAHAVHPITAVQLEWSLWAR--------DIENEIVPLCRELGIGIVP 210 (249)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~i---Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~--------~~~~~~~~~~~~~gi~v~a 210 (249)
+.+.+.+++|++.|.--++ |....+...+ ...+++.+=++-+++.. .....++..|++.|+.|+|
T Consensus 291 ~~~~~~l~~Lr~~G~~ialDDFG~g~ssl~~L----~~l~~d~iKID~s~v~~~~~~~~~~~iv~~ii~la~~lg~~viA 366 (413)
T 3gfz_A 291 DQFRKVLKALRVAGMKLAIDDFGAGYSGLSLL----TRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVA 366 (413)
T ss_dssp TTHHHHHHHHHHHTCEEEEEEETSSSCSHHHH----TTCCCSEEEECHHHHTTTTTBHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCcchHHHH----hhCCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHcCCEEEE
Confidence 3577889999999973332 3333333332 33466776666443321 1127799999999999998
Q ss_pred ccc---------------CcccccCCCCCCCCCCCCcc
Q 025707 211 YCP---------------LGRGFFGGKAVVESVPLDSF 233 (249)
Q Consensus 211 ~sp---------------l~~G~l~g~~~~~~~~~~~~ 233 (249)
=.. +.+|++.+++.+...++-.+
T Consensus 367 EGVEt~~q~~~l~~lG~d~~QGy~~~~P~~~~~~~~~w 404 (413)
T 3gfz_A 367 EGVETLEEWCWLQSVGIRLFQGFLFSRPCLNGIGEICW 404 (413)
T ss_dssp ECCCSHHHHHHHHHTTCCEEESTTTCCCEETSCCCCEE
T ss_pred ecCCCHHHHHHHHHcCCCEEEECcccccCCCCCccccc
Confidence 654 78899999966555544333
No 265
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=28.39 E-value=2.7e+02 Score=23.53 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=45.2
Q ss_pred HHHHHHHHcCCCceeEEEeec-CCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEee
Q 025707 114 CCEASLRRLDVEYIDLYYQHR-VDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~-~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (249)
.+-+.|+..|+|+|++-.-.. ...... ++.+.++++.=.+--|+....+++..+++++....+.+++
T Consensus 255 ~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 255 YLIEELAKRGIAYLHMSETDLAGGKPYS----EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHhCCCEEEEecCcccCCCccc----HHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 456677888988777642110 001112 4556677776667788888888999999998877888877
No 266
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=28.07 E-value=1.6e+02 Score=25.14 Aligned_cols=100 Identities=12% Similarity=0.021 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHH-HHcCCeeEEEcCCCCHHHHHHHhhc-CCceEEeeecCcccc
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKL-VEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWSLWAR 191 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l-~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~n~~~~ 191 (249)
++...+..+ +..=|-+++..+.. ......+..+ ...| ++.+-+...+.+.+++++.. .+..++..+.|+.-.
T Consensus 108 Ai~~al~~l-~~~Gd~Vi~~~~~y----~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 108 AVFTSLGAL-LGAGDRLVAARSLF----GSCFVVCSEILPRWG-VQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQS 181 (414)
T ss_dssp HHHHHHHTT-CCTTCEEEEESCCC----HHHHHHHHTHHHHTT-CEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCC
T ss_pred HHHHHHHHH-hCCCCEEEEcCCcc----chHHHHHHHHHHHcC-cEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCc
Confidence 344444444 23335566655432 2233333332 2233 33344444478888887754 445555556666433
Q ss_pred ch-hhhHHHHHHHhCCcEEecccCccccc
Q 025707 192 DI-ENEIVPLCRELGIGIVPYCPLGRGFF 219 (249)
Q Consensus 192 ~~-~~~~~~~~~~~gi~v~a~spl~~G~l 219 (249)
.. .+++.+.|+++|+.++.=..++.|.+
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~~~ 210 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATPLL 210 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHH
T ss_pred cccHHHHHHHHHHcCCEEEEECCCccccc
Confidence 22 38899999999999998777766544
No 267
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=27.84 E-value=2.2e+02 Score=22.28 Aligned_cols=156 Identities=14% Similarity=0.121 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC---chHHHHHHHHHc----CC--CCCeEEEecccccccCCcccccCCCHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPY---TNEILLGKALKE----LP--RENIQVATKFGFVELGFTSVIVKGTPEY 110 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g---~se~~lg~~l~~----~~--r~~~~I~tK~~~~~~~~~~~~~~~s~~~ 110 (249)
+.+++.++++.|.+.|++.|=.++++..+ .....+-..+.. .+ ..++ .-+.|... +..+ .
T Consensus 22 ~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i--~i~~G~E~--------~~~~-~ 90 (247)
T 2wje_A 22 SREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDL--VIAYGAEI--------YYTP-D 90 (247)
T ss_dssp SHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTC--EEECCCEE--------ECCT-H
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCc--EEEEeeEE--------eecH-H
Confidence 67899999999999999999777765421 111112222221 11 1122 22223211 2233 2
Q ss_pred HHHHHHHH-HHHc-CCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC------CCCHHHHHHHhhcCCceEE
Q 025707 111 VRSCCEAS-LRRL-DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS------EASPDTIRRAHAVHPITAV 182 (249)
Q Consensus 111 i~~~~~~s-L~~L-g~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs------~~~~~~l~~~~~~~~~~~~ 182 (249)
+.+.+++. +..| |. |.+++..+. ........+++..+++.|.+--+|=- ....+.+.++.+.. .. .
T Consensus 91 ~~~~l~~~~~~~l~gs---~~vl~e~~~-~~~~~~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G-~~-l 164 (247)
T 2wje_A 91 VLDKLEKKRIPTLNDS---RYALIEFSM-NTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMG-CY-T 164 (247)
T ss_dssp HHHHHHTTCSCCGGGS---SEEEEECCT-TCCHHHHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTT-CE-E
T ss_pred HHHHHhcCCccEECCC---eEEEEeCCC-CcchHHHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCC-CE-E
Confidence 33333321 1112 22 344444433 23346677788999999987655421 12345555555543 22 5
Q ss_pred eeecCcc--cc------chhhhHHHHHHHhCCcEEecc
Q 025707 183 QLEWSLW--AR------DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 183 q~~~n~~--~~------~~~~~~~~~~~~~gi~v~a~s 212 (249)
|++.+-+ .. .....+...|++.|+.++.-|
T Consensus 165 EiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~GS 202 (247)
T 2wje_A 165 QVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIAS 202 (247)
T ss_dssp EEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEEEC
T ss_pred EEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEEEe
Confidence 6554433 21 112668888889998876544
No 268
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=27.80 E-value=1.6e+02 Score=23.83 Aligned_cols=52 Identities=17% Similarity=0.161 Sum_probs=34.6
Q ss_pred cceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCC-----CcCCCchHHHHHHHHHc
Q 025707 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTAD-----KYGPYTNEILLGKALKE 80 (249)
Q Consensus 23 ~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~-----~Yg~g~se~~lg~~l~~ 80 (249)
++|+-++++..... .....+.++.|-++|+..++... .|+ ..-+.+.+.+++
T Consensus 14 ~~g~~~~s~~~~~~----~~~~~~~l~~~a~~G~~~VEl~~~~~~~~~~--~~~~~~~~~l~~ 70 (303)
T 3l23_A 14 EIGLQIYSLSQELY----KGDVAANLRKVKDMGYSKLELAGYGKGAIGG--VPMMDFKKMAED 70 (303)
T ss_dssp CCEEEGGGGGGGGG----SSCHHHHHHHHHHTTCCEEEECCEETTEETT--EEHHHHHHHHHH
T ss_pred ceEEEEEEchhhhc----cCCHHHHHHHHHHcCCCEEEeccccCcccCC--CCHHHHHHHHHH
Confidence 57888877654111 01366889999999999999875 333 345566677764
No 269
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=27.69 E-value=77 Score=26.65 Aligned_cols=106 Identities=14% Similarity=0.166 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
+..+++|++.-+.|+ .+|.|. .+|+.+-.+++- .+. . |.|.......-+ .+++-++...+++. ++
T Consensus 154 ~~G~~vV~eMnrlGm-ivDlSH-----~s~~t~~dvl~~-s~~-P-iaSHSnaral~~---h~RNl~D~~l~ala---~~ 218 (318)
T 3neh_A 154 RFGKDIIHLLNERKV-FTDVSH-----LSVKAFWETLEQ-AEF-V-IASHSNAKAICS---HPRNLDDEQIKAMI---EH 218 (318)
T ss_dssp HHHHHHHHHHHHHTC-EEECTT-----BCHHHHHHHHHH-CSS-E-EESSCCBTTTSC---CTTSBCHHHHHHHH---HT
T ss_pred hhhHHHHHHHHHcCC-eEEcCC-----CCHHHHHHHHHh-cCC-C-cccccchhhcCC---CCCCCCHHHHHHHH---Hc
Confidence 568899999999998 999997 588999999983 333 3 777766543211 12333444433333 33
Q ss_pred cCCCceeEEEee---cCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 122 LDVEYIDLYYQH---RVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 122 Lg~d~iDl~~lh---~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
=|+ |-+-+.. ..+....++++++.++..++.+=+.+||+.+
T Consensus 219 GGv--igv~~~~~fl~~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGs 262 (318)
T 3neh_A 219 DAM--IHVVFYPLFTTNNGVADTEDVIRHIDHICELGGLKNIGFGS 262 (318)
T ss_dssp TCE--EEECCCHHHHCTTSCCBHHHHHHHHHHHHHTTCGGGEEECC
T ss_pred CCE--EEEEeeHHhhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECC
Confidence 332 1111111 1233456899999999999998899999965
No 270
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=27.33 E-value=1.6e+02 Score=23.35 Aligned_cols=130 Identities=10% Similarity=0.032 Sum_probs=80.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 37 SPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 37 ~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
+..+.++..++++.|.+.|+.-+=..+.|- ....+.|+ . +-|+|-++.+.. ..+.+.....++
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~p~~v-----~~a~~~l~----g-v~v~tvigFP~G-------~~~~~~k~~E~~ 74 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVNPIYA-----PVVRPLLR----K-VKLCVVADFPFG-------ALPTASRIALVS 74 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECGGGH-----HHHGGGCS----S-SEEEEEESTTTC-------CSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEECHHHH-----HHHHHHhC----C-CeEEEEeCCCCC-------CCchHHHHHHHH
Confidence 345789999999999999988776666552 11222222 2 778888765432 134454555666
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc--C-Cee-EEEcCCCCHHHHHHHhhc---CCceEEeee
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE--G-KIK-YIGLSEASPDTIRRAHAV---HPITAVQLE 185 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G-~ir-~iGvs~~~~~~l~~~~~~---~~~~~~q~~ 185 (249)
+ -++|.|-||+++--..-.+.+.+.+.+.+.+.++. + .++ -+-.+-.+.+++.++... .+.+++...
T Consensus 75 ~--i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTS 148 (226)
T 1vcv_A 75 R--LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSS 148 (226)
T ss_dssp H--HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECC
T ss_pred H--HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 6 56899999998853322233456677777777664 2 233 233344456777766554 467777776
No 271
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=27.32 E-value=2.3e+02 Score=23.22 Aligned_cols=96 Identities=8% Similarity=0.063 Sum_probs=57.7
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-------CCCCHHHHHHHhhcCCceEEee
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-------SEASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-------s~~~~~~l~~~~~~~~~~~~q~ 184 (249)
.+.+++.|+-.| +|||++=+-|-.....-+ +-+.++-+++-|.--+.|= +.-..++..+.+....|+++.+
T Consensus 52 ~~~~~DlLe~ag-~yID~lKfg~GTs~l~~~-l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEI 129 (276)
T 1u83_A 52 LQFFKDAIAGAS-DYIDFVKFGWGTSLLTKD-LEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEI 129 (276)
T ss_dssp HHHHHHHHHHHG-GGCCEEEECTTGGGGCTT-HHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhh-hhcceEEecCcchhhhHH-HHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEE
Confidence 356778888999 799999998765533222 4444555556666545442 1123445555555567888887
Q ss_pred ecCccccch--hhhHHHHHHHhCCcEEe
Q 025707 185 EWSLWARDI--ENEIVPLCRELGIGIVP 210 (249)
Q Consensus 185 ~~n~~~~~~--~~~~~~~~~~~gi~v~a 210 (249)
.-..+.-.. ...+++.+++. ..|+.
T Consensus 130 SdGti~l~~~~~~~lI~~a~~~-f~Vl~ 156 (276)
T 1u83_A 130 SNGTLPMTNKEKAAYIADFSDE-FLVLS 156 (276)
T ss_dssp CCSSSCCCHHHHHHHHHHHTTT-SEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHhh-cEEee
Confidence 655444322 25677777777 66554
No 272
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=27.32 E-value=2.6e+02 Score=23.01 Aligned_cols=24 Identities=21% Similarity=0.505 Sum_probs=21.8
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTA 62 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta 62 (249)
++.++..++++...++|+..|+..
T Consensus 25 ~~~e~k~~i~~~L~~~Gv~~IE~g 48 (307)
T 1ydo_A 25 IATEDKITWINQLSRTGLSYIEIT 48 (307)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEC
Confidence 478999999999999999999986
No 273
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=27.15 E-value=1.1e+02 Score=23.92 Aligned_cols=77 Identities=19% Similarity=0.093 Sum_probs=46.3
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHH
Q 025707 35 YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (249)
Q Consensus 35 ~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~ 114 (249)
.|.+..++....++++|-+.||+.+=.|...|. .+...+ +.+ ..-++++.|.-.-...+ ....+.+.
T Consensus 23 ~G~eNT~~tl~la~era~e~~Ik~iVVAS~sG~-TA~k~~-e~~---~~i~lVvVTh~~GF~~p--------g~~e~~~e 89 (201)
T 1vp8_A 23 PGRENTEETLRLAVERAKELGIKHLVVASSYGD-TAMKAL-EMA---EGLEVVVVTYHTGFVRE--------GENTMPPE 89 (201)
T ss_dssp CSGGGHHHHHHHHHHHHHHHTCCEEEEECSSSH-HHHHHH-HHC---TTCEEEEEECCTTSSST--------TCCSSCHH
T ss_pred CCcccHHHHHHHHHHHHHHcCCCEEEEEeCCCh-HHHHHH-HHh---cCCeEEEEeCcCCCCCC--------CCCcCCHH
Confidence 344556778888888899999999998888872 122222 233 22356666654322211 12223455
Q ss_pred HHHHHHHcCC
Q 025707 115 CEASLRRLDV 124 (249)
Q Consensus 115 ~~~sL~~Lg~ 124 (249)
..+-|++.|+
T Consensus 90 ~~~~L~~~G~ 99 (201)
T 1vp8_A 90 VEEELRKRGA 99 (201)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhCCC
Confidence 7777889986
No 274
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=27.05 E-value=2.2e+02 Score=22.08 Aligned_cols=91 Identities=16% Similarity=0.109 Sum_probs=48.7
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHH-HHHHcCCeeEEEcCC---CCHHHHHHHhhc---CCceEEeeecCccc
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMK-KLVEEGKIKYIGLSE---ASPDTIRRAHAV---HPITAVQLEWSLWA 190 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~-~l~~~G~ir~iGvs~---~~~~~l~~~~~~---~~~~~~q~~~n~~~ 190 (249)
.+.++|.+.+++...|.+. .... +.++.+. .+.+.|. +..+++. -..+.+++.++. .+...+.+.-.
T Consensus 38 ~~~~~G~~~vEl~~~~~~~-~~~~-~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~--- 111 (257)
T 3lmz_A 38 TLERLDIHYLCIKDFHLPL-NSTD-EQIRAFHDKCAAHKV-TGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN--- 111 (257)
T ss_dssp HHHHTTCCEEEECTTTSCT-TCCH-HHHHHHHHHHHHTTC-EEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC---
T ss_pred HHHHhCCCEEEEecccCCC-CCCH-HHHHHHHHHHHHcCC-eEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC---
Confidence 3568999999988766422 1222 3334444 4445554 4444432 244555555443 22223333211
Q ss_pred cchhhhHHHHHHHhCCcEEecccCc
Q 025707 191 RDIENEIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 191 ~~~~~~~~~~~~~~gi~v~a~spl~ 215 (249)
......+.+.|++.||.+ ++-+..
T Consensus 112 ~~~l~~l~~~a~~~gv~l-~lEn~~ 135 (257)
T 3lmz_A 112 YELLPYVDKKVKEYDFHY-AIHLHG 135 (257)
T ss_dssp GGGHHHHHHHHHHHTCEE-EEECCC
T ss_pred HHHHHHHHHHHHHcCCEE-EEecCC
Confidence 122378999999999974 455553
No 275
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=26.81 E-value=3e+02 Score=23.57 Aligned_cols=150 Identities=15% Similarity=0.127 Sum_probs=80.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHH---HHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILL---GKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~l---g~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
..++..+.|+.|-+.|+..+-|+-+-..+..+..+ .+.++....-.+-+.. +.+|+
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~--------------DIsp~------- 73 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMV--------------DISGE------- 73 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEE--------------EECHH-------
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEE--------------ECCHH-------
Confidence 45667799999999999999999776433232222 2222211122222222 23343
Q ss_pred HHHHHcCCCceeEEEeecC-------CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC-CceEEeeecCc
Q 025707 117 ASLRRLDVEYIDLYYQHRV-------DTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH-PITAVQLEWSL 188 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~-------~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~-~~~~~q~~~n~ 188 (249)
+|+.||+++=|+-.++.. |.....++... |-.. .-=.+=.|+.+.+.+..++... .++-+..-+|.
T Consensus 74 -~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~~~eia~----ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNF 147 (372)
T 2p0o_A 74 -ALKRAGFSFDELEPLIELGVTGLRMDYGITIEQMAH----ASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHNY 147 (372)
T ss_dssp -HHHTTTCBTTBCHHHHHHTCCEEEECSSCCHHHHHH----HHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCC
T ss_pred -HHHHcCCCHHHHHHHHHcCCCEEEEcCCCCHHHHHH----HhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeecc
Confidence 233444444333333221 34444443332 2222 3345566788888888888763 23333333444
Q ss_pred cccc-------hhhhHHHHHHHhCCcEEecccCcc
Q 025707 189 WARD-------IENEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 189 ~~~~-------~~~~~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+. ...+--+..++.|+.+.|+-|-..
T Consensus 148 YPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~ 182 (372)
T 2p0o_A 148 YPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDG 182 (372)
T ss_dssp CCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 4432 124455667788999999988764
No 276
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=26.77 E-value=2.3e+02 Score=22.19 Aligned_cols=132 Identities=13% Similarity=0.065 Sum_probs=82.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 38 PLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 38 ~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
..+.++..++++.|.+.|+.-+=..+.|- +...+.|+ ...+-|++-++.+.. ..+.+.....+++
T Consensus 15 ~~t~~~i~~l~~~a~~~~~~aVcv~p~~v-----~~~~~~l~---~~~v~v~~vigFP~G-------~~~~~~k~~e~~~ 79 (220)
T 1ub3_A 15 TATLEEVAKAAEEALEYGFYGLCIPPSYV-----AWVRARYP---HAPFRLVTVVGFPLG-------YQEKEVKALEAAL 79 (220)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEECCGGGH-----HHHHHHCT---TCSSEEEEEESTTTC-------CSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEECHHHH-----HHHHHHhC---CCCceEEEEecCCCC-------CCchHHHHHHHHH
Confidence 45789999999999999988776666552 22223443 345778887765431 1344555566666
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC---CeeEE-EcCCCCHHHHHHHhhc---CCceEEeee
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG---KIKYI-GLSEASPDTIRRAHAV---HPITAVQLE 185 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G---~ir~i-Gvs~~~~~~l~~~~~~---~~~~~~q~~ 185 (249)
.++ +|.|-||++.--..-...+.+.+.+.+.+.++.- .++-| -.+-.+.+.+.++... ...+++-..
T Consensus 80 Ai~-~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 80 ACA-RGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp HHH-TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHH-cCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 665 7999999987433211234566777777777652 33433 2233456666666554 466777776
No 277
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=26.52 E-value=3e+02 Score=23.36 Aligned_cols=63 Identities=13% Similarity=0.007 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEee
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (249)
..+-+.|+..|+|+|++ |...... +. ++++++.=.+--|+....+++..+++++....+.+.+
T Consensus 253 ~~la~~l~~~Gvd~i~v---~~~~~~~---~~---~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 253 GHVARELGRRRIAFLFA---RESFGGD---AI---GQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCCSTT---CC---HHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---CCCCCCH---HH---HHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 44666778889877664 5443211 22 3334433245667777789999999998877777776
No 278
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=26.43 E-value=1.6e+02 Score=23.85 Aligned_cols=130 Identities=8% Similarity=0.086 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCC----------CCcCCCchHHHHHHHHHcCCCC-CeEEEecccccccCCcccccCCC
Q 025707 40 SEEDGISIIKHAFS-KGITFFDTA----------DKYGPYTNEILLGKALKELPRE-NIQVATKFGFVELGFTSVIVKGT 107 (249)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~Dta----------~~Yg~g~se~~lg~~l~~~~r~-~~~I~tK~~~~~~~~~~~~~~~s 107 (249)
+.++..++.+.+.+ .|+..++.- ..|| ...+.+-+.++...+. .+-|.-|+.... .+
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g--~~~~~~~eii~~v~~~~~~pv~vk~~~~~---------~~ 177 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFG--TDPEVAAALVKACKAVSKVPLYVKLSPNV---------TD 177 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGG--GCHHHHHHHHHHHHHHCSSCEEEEECSCS---------SC
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhc--CCHHHHHHHHHHHHHhcCCCEEEEECCCh---------HH
Confidence 46777777777777 888877641 1233 2333344444431111 344555654221 11
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEE------eecCCCC-------------CCHHHHHHHHHHHHHcCCeeEEEcCCC-CH
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYY------QHRVDTS-------------VPIEETIGEMKKLVEEGKIKYIGLSEA-SP 167 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~------lh~~~~~-------------~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~ 167 (249)
... +-+.++..|+|+|++.- +|..... ......++.+.++++.=.+--|+.... +.
T Consensus 178 ~~~----~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~ 253 (311)
T 1ep3_A 178 IVP----IAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANA 253 (311)
T ss_dssp SHH----HHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSH
T ss_pred HHH----HHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCH
Confidence 222 23456678998887731 1221110 011224677777877666777887776 78
Q ss_pred HHHHHHhhcCCceEEeee
Q 025707 168 DTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~ 185 (249)
+.+.+++... .+.+|+-
T Consensus 254 ~d~~~~l~~G-Ad~V~vg 270 (311)
T 1ep3_A 254 QDVLEMYMAG-ASAVAVG 270 (311)
T ss_dssp HHHHHHHHHT-CSEEEEC
T ss_pred HHHHHHHHcC-CCEEEEC
Confidence 8888887754 6777773
No 279
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=26.29 E-value=1.6e+02 Score=24.36 Aligned_cols=99 Identities=12% Similarity=0.083 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEee-cCCC-CC----CHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCce
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQH-RVDT-SV----PIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh-~~~~-~~----~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (249)
+.+.+.+..++ +..-|.|.||+---- .|.. .. .++.+...++.+++.+. -|.+-+++++.++++++....-
T Consensus 44 ~~~~a~~~a~~-~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa~i 120 (294)
T 2y5s_A 44 ARDDALRRAER-MIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGADL 120 (294)
T ss_dssp CTTHHHHHHHH-HHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCCCE
Confidence 34444444433 345688999988743 2321 12 24446666677766543 4788899999999999874322
Q ss_pred EEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 181 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+ +..|-.. ..++++.+++.|++++.+..
T Consensus 121 I--NdVsg~~---d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 121 I--NDIWGFR---QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp E--EETTTTC---STTHHHHHSSSSCEEEEECC
T ss_pred E--EECCCCC---chHHHHHHHHhCCCEEEECC
Confidence 2 3333333 25799999999999999865
No 280
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=26.27 E-value=2.7e+02 Score=22.77 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTA 62 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta 62 (249)
++.++-.++++...++|+..|+..
T Consensus 24 ~~~~~K~~i~~~L~~~Gv~~IE~g 47 (293)
T 3ewb_X 24 FDVKEKIQIALQLEKLGIDVIEAG 47 (293)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 478899999999999999999986
No 281
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=25.88 E-value=3.5e+02 Score=24.01 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC-chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g-~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.+++...++.+.+.|...++---.|-.. .....+...++. .+-.++++.+..... +. .+.+.+.-.+-++..
T Consensus 15 ~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eG---G~--~~~~~~~~~~ll~~~ 88 (523)
T 2o7s_A 15 SIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKK-SPLPTLFTYRPKWEG---GQ--YEGDENERRDVLRLA 88 (523)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHHHHHH-CSSCEEEECCBGGGT---SS--BCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHHHHhc-CCCcEEEEecccccC---CC--CCCCHHHHHHHHHHH
Confidence 67888888999999999888544333211 123445555542 334455555432211 11 123444333444444
Q ss_pred HHHcCCCceeEEE
Q 025707 119 LRRLDVEYIDLYY 131 (249)
Q Consensus 119 L~~Lg~d~iDl~~ 131 (249)
+ ++|.||||+=+
T Consensus 89 ~-~~~~~yiDvEl 100 (523)
T 2o7s_A 89 M-ELGADYIDVEL 100 (523)
T ss_dssp H-HHTCSEEEEEH
T ss_pred H-HhCCCEEEEEC
Confidence 3 57899999644
No 282
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=24.99 E-value=1.4e+02 Score=25.64 Aligned_cols=108 Identities=11% Similarity=0.007 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHcCCC--ceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCH--HHHHHHhhcCCceEEeeec
Q 025707 111 VRSCCEASLRRLDVE--YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP--DTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 111 i~~~~~~sL~~Lg~d--~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~--~~l~~~~~~~~~~~~q~~~ 186 (249)
+...+...|++.++. ++-+=+-... ......+.+.+++|++.|. .|.+.+|.. ..+..+.. .+++.+=++-
T Consensus 292 ~~~~l~~~l~~~~~~~~~l~lEitE~~--~~~~~~~~~~~~~l~~~G~--~ialDdfG~g~ssl~~L~~-l~~d~iKiD~ 366 (430)
T 3pjx_A 292 ALNKVFEILRAHSNLGARLTLEIGEEQ--LPEQAVLEQLTRRLRELGF--SLSLQRFGGRFSMIGNLAR-LGLAYLKIDG 366 (430)
T ss_dssp HHHHHHHHHHTTGGGGGGEEEEEEGGG--CCCHHHHHHHHHHHHHHTC--EEEEEEECCCHHHHCTHHH-HCCSCEEECG
T ss_pred HHHHHHHHHHhcCCCCceEEEEEECcc--ccccHHHHHHHHHHHHCCC--EEEEeCCCCCchhHHHHHh-CCCCEEEECH
Confidence 456677777777753 3333333322 1223566777899999998 454444332 22222222 3566666654
Q ss_pred Ccccc---c-----hhhhHHHHHHHhCCcEEeccc---------------CcccccCCCC
Q 025707 187 SLWAR---D-----IENEIVPLCRELGIGIVPYCP---------------LGRGFFGGKA 223 (249)
Q Consensus 187 n~~~~---~-----~~~~~~~~~~~~gi~v~a~sp---------------l~~G~l~g~~ 223 (249)
+++.. + ....+++.|+..|+.|++=.. +.+|++.+++
T Consensus 367 ~~v~~~~~~~~~~~~~~~i~~~a~~l~~~viaeGVEt~~~~~~l~~~g~~~~QG~~~~~P 426 (430)
T 3pjx_A 367 SYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEP 426 (430)
T ss_dssp GGTTTTTTCHHHHHHHHHHHHHHHTTTCCEEECCCCCHHHHHHHHHTTCSEEESGGGCCC
T ss_pred HHHHhHhcChhhHHHHHHHHHHHHHCCCcEEEEecCCHHHHHHHHHcCCCeecccccCCC
Confidence 44432 1 126788999999999997654 5678887774
No 283
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=24.85 E-value=1.4e+02 Score=24.67 Aligned_cols=56 Identities=16% Similarity=0.265 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecC---CCCC-------------------CH------HHHHHHHHHHHHcCCeeE
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRV---DTSV-------------------PI------EETIGEMKKLVEEGKIKY 159 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~---~~~~-------------------~~------~~~~~~l~~l~~~G~ir~ 159 (249)
++...+...+.+++||...++.+-+... ++.. .+ ..+.+.|.+.+++|++-+
T Consensus 69 ~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~ 148 (291)
T 3en0_A 69 PLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISL 148 (291)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEE
T ss_pred hHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEE
Confidence 5556667777888888876766655322 1110 01 246788999999997778
Q ss_pred EEcC
Q 025707 160 IGLS 163 (249)
Q Consensus 160 iGvs 163 (249)
+|.|
T Consensus 149 ~GtS 152 (291)
T 3en0_A 149 AGTS 152 (291)
T ss_dssp EEET
T ss_pred EEeC
Confidence 8987
No 284
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=24.75 E-value=2.9e+02 Score=22.62 Aligned_cols=149 Identities=9% Similarity=0.031 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (249)
.....++-....+.|+|..|.+..-. .....++...-+.... ...+.+.++++++..-+
T Consensus 17 pGIVa~Vs~~La~~g~NI~d~~q~~d--------------~~~g~Ffmr~~~~~~~-------~~~~~~~L~~~f~~la~ 75 (288)
T 3obi_A 17 AGIVSAVSTFLFENGQNILDAQQYND--------------TESGHFFMRVVFNAAA-------KVIPLASLRTGFGVIAA 75 (288)
T ss_dssp TTHHHHHHHHHHHTTEEEEEEEEEEE--------------TTTTEEEEEEEEEESS-------CCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCcEEeeeeeec--------------CCCCceEEEEEEEcCC-------CCCCHHHHHHHHHHHHH
Confidence 34455556666699999999876421 1234455444442211 02468899999999999
Q ss_pred HcCCCceeEEEeecCCCCCC-------HHHHHHHHHHHHHcCCe--eEE-EcCCCCHHHHHHHhhcCCceEEeeecCccc
Q 025707 121 RLDVEYIDLYYQHRVDTSVP-------IEETIGEMKKLVEEGKI--KYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWA 190 (249)
Q Consensus 121 ~Lg~d~iDl~~lh~~~~~~~-------~~~~~~~l~~l~~~G~i--r~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (249)
+++++ +.++..+.... ...-+++|-...++|.. .-. -+||+.++ +.+..+...+-+.+++...-.
T Consensus 76 ~~~m~----~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~~-~~~~A~~~gIp~~~~~~~~~~ 150 (288)
T 3obi_A 76 KFTMG----WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPRE-TFSGFDFGDIPFYHFPVNKDT 150 (288)
T ss_dssp HTTCE----EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCGG-GSCCTTTTTCCEEECCCCTTT
T ss_pred HcCCE----EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCChh-HHHHHHHcCCCEEEeCCCccc
Confidence 99875 34444333211 12355555555666753 222 35777232 223334455666666554423
Q ss_pred cc-hhhhHHHHHHHhCCcEEecccCc
Q 025707 191 RD-IENEIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 191 ~~-~~~~~~~~~~~~gi~v~a~spl~ 215 (249)
+. .+.++++..++.++.++.-.-++
T Consensus 151 r~~~~~~~~~~l~~~~~Dlivlagy~ 176 (288)
T 3obi_A 151 RRQQEAAITALIAQTHTDLVVLARYM 176 (288)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEhhhhh
Confidence 32 23678999999988887655543
No 285
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=24.71 E-value=1.1e+02 Score=25.45 Aligned_cols=105 Identities=8% Similarity=0.126 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCC----CHHHHHHHHHHHHHcCC-eeEEEcCCC------CHHHHHHHhhc
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV----PIEETIGEMKKLVEEGK-IKYIGLSEA------SPDTIRRAHAV 176 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~----~~~~~~~~l~~l~~~G~-ir~iGvs~~------~~~~l~~~~~~ 176 (249)
++.+..+++...+.= ... .+++...+... .....++.++.|++.|. |-.||+..| +++.++..++.
T Consensus 148 ~~~i~~af~~Ar~~d--P~a-~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~~ 224 (313)
T 1v0l_A 148 NDWIEVAFRTARAAD--PSA-KLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQN 224 (313)
T ss_dssp TTHHHHHHHHHHHHC--TTS-EEEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHhhC--CCC-EEEEeccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHHH
Confidence 566777777665542 122 23333322211 23456788888999997 899999654 23344443332
Q ss_pred ---CCceEEeeecCccccchh--hhHHHHHHHhC--CcEEecccCc
Q 025707 177 ---HPITAVQLEWSLWARDIE--NEIVPLCRELG--IGIVPYCPLG 215 (249)
Q Consensus 177 ---~~~~~~q~~~n~~~~~~~--~~~~~~~~~~g--i~v~a~spl~ 215 (249)
....+.-.++.+-...+. ..+++.|.++. ++|+-|..-.
T Consensus 225 ~a~~G~pv~iTEldi~~~qa~~y~~~~~~~~~~~~v~git~Wg~~D 270 (313)
T 1v0l_A 225 FAALGVDVAITELDIQGAPASTYANVTNDCLAVSRCLGITVWGVRD 270 (313)
T ss_dssp HHTTTCEEEEEEEEETTCCHHHHHHHHHHHHTCTTEEEEEESCSBG
T ss_pred HHhcCCeEEEEeCCccHHHHHHHHHHHHHHHhcCCceEEEEECCCC
Confidence 233333333333222222 78899999875 5666665543
No 286
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=24.63 E-value=3.3e+02 Score=23.20 Aligned_cols=24 Identities=25% Similarity=0.409 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTA 62 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta 62 (249)
++.++..++++..-+.|+..|+..
T Consensus 22 ~~~~~k~~ia~~L~~~Gv~~IE~g 45 (382)
T 2ztj_A 22 FSTQDKVEIAKALDEFGIEYIEVT 45 (382)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEc
Confidence 478889999999999999999985
No 287
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=24.45 E-value=2.1e+02 Score=23.10 Aligned_cols=85 Identities=12% Similarity=-0.047 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHc
Q 025707 43 DGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122 (249)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~L 122 (249)
...+.++.|-+.|+..++.|...-. -+++..-+.++...+..+.+.+-++...+. .....+++.+.+.+++-|+.
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~-l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~---~~~~~~~~~~I~~~~~~LeA- 160 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSD-ISLEERNNAIKRAKDNGFMVLTEVGKKMPD---KDKQLTIDDRIKLINFDLDA- 160 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEEECCSSHH---HHTTCCHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHcCCCEEEECCCccc-CCHHHHHHHHHHHHHCCCEEeeeccccCCc---ccCCCCHHHHHHHHHHHHHC-
Confidence 4556667777777777777766643 344444555554344446666665543321 11235677777777777776
Q ss_pred CCCceeEEEeecC
Q 025707 123 DVEYIDLYYQHRV 135 (249)
Q Consensus 123 g~d~iDl~~lh~~ 135 (249)
|. |.+++...
T Consensus 161 GA---~~ViiEar 170 (251)
T 1qwg_A 161 GA---DYVIIEGR 170 (251)
T ss_dssp TC---SEEEECCT
T ss_pred CC---cEEEEeee
Confidence 65 44677554
No 288
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=23.97 E-value=1.9e+02 Score=21.60 Aligned_cols=16 Identities=6% Similarity=0.098 Sum_probs=9.9
Q ss_pred HHHHHHHhCCcEEecc
Q 025707 197 IVPLCRELGIGIVPYC 212 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~s 212 (249)
-+..+++.|+..+...
T Consensus 117 Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 117 LLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTCEEEEES
T ss_pred HHHHHHHCCCEEEEEc
Confidence 4556677777666543
No 289
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=23.86 E-value=3.1e+02 Score=22.74 Aligned_cols=87 Identities=13% Similarity=0.005 Sum_probs=52.0
Q ss_pred CceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccc-hhhhHHHHH
Q 025707 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARD-IENEIVPLC 201 (249)
Q Consensus 125 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~-~~~~~~~~~ 201 (249)
+.=|.+++..+... ..+..+ ...| ++.+.+...+.+.+++++.. ..+.++..++|+.-.. ..+++.++|
T Consensus 141 ~~gd~Vl~~~~~~~----~~~~~~---~~~g-~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la 212 (409)
T 3kki_A 141 QPNTNVYIDFFAHM----SLWEGA---RYAN-AQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNIS 212 (409)
T ss_dssp CTTCEEEEETTSCH----HHHHHH---HHTT-CEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred CCCCEEEECCCcCH----HHHHHH---HHcC-CeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHH
Confidence 34477787665431 122222 2222 33445555678888888764 3444555555543221 138899999
Q ss_pred HHhCCcEEecccCccccc
Q 025707 202 RELGIGIVPYCPLGRGFF 219 (249)
Q Consensus 202 ~~~gi~v~a~spl~~G~l 219 (249)
+++|+-++.=.+.+.|.+
T Consensus 213 ~~~~~~li~De~~~~g~~ 230 (409)
T 3kki_A 213 KEFGCALLVDESHSLGTH 230 (409)
T ss_dssp HHHTCEEEEECTTTTTTS
T ss_pred HHcCCEEEEECCcccccc
Confidence 999999997766665544
No 290
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=23.83 E-value=1.4e+02 Score=22.55 Aligned_cols=85 Identities=12% Similarity=0.004 Sum_probs=42.7
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc--CCeeEEEcCC-CCHHH-HHHHhhcCCceEEeeecCccccchhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSE-ASPDT-IRRAHAVHPITAVQLEWSLWARDIEN 195 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G~ir~iGvs~-~~~~~-l~~~~~~~~~~~~q~~~n~~~~~~~~ 195 (249)
+.++ +++|++-+..|.. +..-.+.++++++. +.--++.+-. ...+. ++.+.+. +.+.+-+....... ...
T Consensus 20 ~~~~-~~~diie~G~p~~---~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~-Gad~v~v~~~~~~~-~~~ 93 (211)
T 3f4w_A 20 DKVV-DDVDIIEVGTPFL---IREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDA-GADYVTVLGVTDVL-TIQ 93 (211)
T ss_dssp HHHG-GGCSEEEECHHHH---HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHT-TCSEEEEETTSCHH-HHH
T ss_pred HHhh-cCccEEEeCcHHH---HhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhc-CCCEEEEeCCCChh-HHH
Confidence 3445 6899988765421 23345566666665 3322333222 23344 4444443 34444443222111 125
Q ss_pred hHHHHHHHhCCcEEe
Q 025707 196 EIVPLCRELGIGIVP 210 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a 210 (249)
.+++.|+++|+.++.
T Consensus 94 ~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 94 SCIRAAKEAGKQVVV 108 (211)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCeEEE
Confidence 677888888877663
No 291
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=23.65 E-value=2.1e+02 Score=23.62 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCc----hHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYT----NEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~----se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
.+.++..++.+.|.++|..|+=|+-.|+.+. .-+.+.+..+. ..+=.|..+--+ .+.+...+
T Consensus 185 Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGI-------------rt~edAl~ 251 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGGI-------------RTIEDCVK 251 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSC-------------CSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCC-------------CCHHHHHH
Q ss_pred HHHHHHHHcCCCc
Q 025707 114 CCEASLRRLDVEY 126 (249)
Q Consensus 114 ~~~~sL~~Lg~d~ 126 (249)
-++.--.|+|+..
T Consensus 252 mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 252 MVRAGAERLGASA 264 (288)
T ss_dssp HHHTTCSEEEESC
T ss_pred HHHcCCceeehhh
No 292
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=23.55 E-value=2e+02 Score=24.03 Aligned_cols=101 Identities=12% Similarity=0.057 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHH-HHcCCeeEEEcCCCCHHHHHHHhhc-CCceEEeeecCccc
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKL-VEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWSLWA 190 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l-~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~n~~~ 190 (249)
+++...+..+ ...=|-+++..+.. ......+..+ +..| ++.+-+...+.+.+++++.. ....++..+.|+.-
T Consensus 85 ~ai~~~~~~~-~~~gd~vl~~~~~y----~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG 158 (389)
T 3acz_A 85 GAISSSTLAF-LQKGDHLIAGDTLY----GCTVSLFTHWLPRFG-IEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTC 158 (389)
T ss_dssp HHHHHHHTTT-CCTTCEEEEESSCC----HHHHHHHHHHHHHTT-CEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHHH-hCCCCEEEEeCCCc----hHHHHHHHHHHHHcC-CEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCC
Confidence 3444444443 22225555554422 2334444332 3333 33344444577777776653 23444444555432
Q ss_pred cc-hhhhHHHHHHHhCCcEEecccCccccc
Q 025707 191 RD-IENEIVPLCRELGIGIVPYCPLGRGFF 219 (249)
Q Consensus 191 ~~-~~~~~~~~~~~~gi~v~a~spl~~G~l 219 (249)
.- ...++.+.|+++|+.++.=..++.+.+
T Consensus 159 ~~~~l~~i~~~~~~~~~~livD~~~~~~~~ 188 (389)
T 3acz_A 159 KVSDIKGIAVVCHERGARLVVDATFTSPCF 188 (389)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECTTTCTTT
T ss_pred eecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 21 238899999999999998777766653
No 293
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=23.49 E-value=3.2e+02 Score=22.76 Aligned_cols=24 Identities=13% Similarity=0.084 Sum_probs=21.8
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTA 62 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta 62 (249)
++.++..++++...++|+..|+..
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG 50 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVA 50 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 578999999999999999999994
No 294
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=23.48 E-value=2.5e+02 Score=22.85 Aligned_cols=59 Identities=15% Similarity=0.078 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC---CCCHHHHHHHh
Q 025707 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS---EASPDTIRRAH 174 (249)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs---~~~~~~l~~~~ 174 (249)
+.+.+.+.++..++ .-+.+|++.+..|+.. + .+...++.+.|| +|=+- ..+.++.+++.
T Consensus 55 ~~~~ll~~~~~l~~--~~~~vD~V~I~tP~~~-H----~~~~~~al~aGk--hVl~EKPla~~~~ea~~l~ 116 (312)
T 3o9z_A 55 EPEAFEAYLEDLRD--RGEGVDYLSIASPNHL-H----YPQIRMALRLGA--NALSEKPLVLWPEEIARLK 116 (312)
T ss_dssp CHHHHHHHHHHHHH--TTCCCSEEEECSCGGG-H----HHHHHHHHHTTC--EEEECSSSCSCHHHHHHHH
T ss_pred CHHHHHHHhhhhcc--cCCCCcEEEECCCchh-h----HHHHHHHHHCCC--eEEEECCCCCCHHHHHHHH
Confidence 45555444443333 4568999999888642 2 334445556786 44331 23455544443
No 295
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=23.46 E-value=3.1e+02 Score=22.49 Aligned_cols=138 Identities=16% Similarity=0.084 Sum_probs=80.9
Q ss_pred CCCCHHHHHHHHHHHHHc--CCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 37 SPLSEEDGISIIKHAFSK--GITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 37 ~~~~~~~~~~~l~~A~~~--Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
+..+.++..++++.|.+. |+.-+=+.+.|- ....+.|+. .....+-|+|-++.+.. ..+.+....
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~p~~V-----~~a~~~L~~~gs~~~v~v~tVigFP~G-------~~~~~~Kv~ 110 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVYPKFV-----KFINEKIKQEINPFKPKIACVINFPYG-------TDSMEKVLN 110 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEECGGGH-----HHHHHHHHHHSSSCCSEEEEEESTTTC-------CSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEECHHHH-----HHHHHHhhccCCCCCceEEEEeCCCCC-------CCCHHHHHH
Confidence 345789999999999999 888887666552 334445542 12226778888876432 134555556
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHH---HHHHHHHHHHHc--CCe-eEE-EcCC-CCHHHHHHHhhc---CCceEE
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIE---ETIGEMKKLVEE--GKI-KYI-GLSE-ASPDTIRRAHAV---HPITAV 182 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~---~~~~~l~~l~~~--G~i-r~i-Gvs~-~~~~~l~~~~~~---~~~~~~ 182 (249)
.+++.++ +|.|-||+++--..-...+.+ .+.+.+.+.++. +.+ +-| -.+- .+.+.+.++... .+.+++
T Consensus 111 E~~~Av~-~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfV 189 (281)
T 2a4a_A 111 DTEKALD-DGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAVLNGNADFI 189 (281)
T ss_dssp HHHHHHH-HTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHH-cCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCCEE
Confidence 6666665 599999999843311122234 677777777775 222 111 1111 123324444333 667788
Q ss_pred eee--cC
Q 025707 183 QLE--WS 187 (249)
Q Consensus 183 q~~--~n 187 (249)
... |+
T Consensus 190 KTSTGf~ 196 (281)
T 2a4a_A 190 KTSTGKV 196 (281)
T ss_dssp ECCCSCS
T ss_pred EeCCCCC
Confidence 877 55
No 296
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=23.40 E-value=1.1e+02 Score=23.91 Aligned_cols=22 Identities=23% Similarity=0.392 Sum_probs=17.7
Q ss_pred ccchhhhHHHHHHHhCCcEEec
Q 025707 190 ARDIENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 190 ~~~~~~~~~~~~~~~gi~v~a~ 211 (249)
++..+...+..|.+.||++++.
T Consensus 123 Dp~~e~~ai~EA~~l~IPvIal 144 (208)
T 1vi6_A 123 DPAIDKQAVSEATAVGIPVVAL 144 (208)
T ss_dssp CTTTTHHHHHHHHHTTCCEEEE
T ss_pred CCCcchhHHHHHHHhCCCEEEE
Confidence 3444577999999999999975
No 297
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=23.36 E-value=3e+02 Score=22.35 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=21.9
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCC
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTA 62 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta 62 (249)
.+.++..++++...++|+..|+..
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g 47 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETT 47 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEC
Confidence 578999999999999999999986
No 298
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=23.15 E-value=2.8e+02 Score=21.97 Aligned_cols=71 Identities=8% Similarity=0.030 Sum_probs=39.8
Q ss_pred HHHHHHHHHHc--CCeeEEEcCC-CCH----HHHHHHhhcCCceEEeeecCc----cccchhhhHHHHHHHhCCcEEecc
Q 025707 144 TIGEMKKLVEE--GKIKYIGLSE-ASP----DTIRRAHAVHPITAVQLEWSL----WARDIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 144 ~~~~l~~l~~~--G~ir~iGvs~-~~~----~~l~~~~~~~~~~~~q~~~n~----~~~~~~~~~~~~~~~~gi~v~a~s 212 (249)
..+.+.++.++ ++...+|+-+ ..+ +.++++.+..++..+.+..+. .+......+++.|+++|++|+...
T Consensus 76 ~n~~~~~~~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 155 (307)
T 2f6k_A 76 ANDDGKSLAQQYPDQLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHP 155 (307)
T ss_dssp HHHHHHHHHHHCTTTEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHhCccceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECC
Confidence 34455555544 4555555544 332 345555544445444443221 111223789999999999999776
Q ss_pred cC
Q 025707 213 PL 214 (249)
Q Consensus 213 pl 214 (249)
.-
T Consensus 156 ~~ 157 (307)
T 2f6k_A 156 NE 157 (307)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 299
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=22.99 E-value=51 Score=28.35 Aligned_cols=107 Identities=12% Similarity=0.136 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
+..+++|++.-+.|+ .+|.|. .+++.+-.+++- . +.-+|.|.......-+ .+++-++...+++.+ +
T Consensus 192 ~~G~~vV~emnrlGm-ivDlSH-----~s~~t~~dvl~~-s-~~PviaSHSnaral~~---h~RNl~De~l~ala~---~ 257 (364)
T 3ly0_A 192 EAGRRLVAECNRLKI-MLDLSH-----LNEKGFDDVARL-S-DAPLVATHSNAHAVTP---STRNLTDRQLAMIRE---S 257 (364)
T ss_dssp HHHHHHHHHHHHHTC-EEBCTT-----BCHHHHHHHHHH-C-SSCCEETTCCBTTTSC---CTTSBCHHHHHHHHH---T
T ss_pred HHHHHHHHHHHHcCC-EEEcCC-----CCHHHHHHHHHh-c-CCCeEEeCCchhhcCC---CCCCCCHHHHHHHHH---c
Confidence 568899999999998 999997 578888889883 3 3346667765433211 122333433333332 2
Q ss_pred cCCCceeEEEeec---C----CCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 122 LDVEYIDLYYQHR---V----DTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 122 Lg~d~iDl~~lh~---~----~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
=| -|-+-+... + +....++++++.++.+++..=+.+||+.+
T Consensus 258 GG--vigv~f~~~fl~~~~~~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGs 305 (364)
T 3ly0_A 258 RG--MVGLNFATSFLREDGRRSAEMGWEPVLRHLDHLIDRLGEDHVGMGS 305 (364)
T ss_dssp TC--EEEECCCHHHHSTTCCCCSCCCSHHHHHHHHHHHHHHCTTSEEECC
T ss_pred Cc--EEEEeccHhhhcCCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEECC
Confidence 22 122211110 1 11346788899999888887789999965
No 300
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=22.98 E-value=2.9e+02 Score=22.00 Aligned_cols=96 Identities=8% Similarity=-0.057 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeecC--CCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 109 EYVRSCCEASLRRLDVEYIDLYYQHRV--DTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 109 ~~i~~~~~~sL~~Lg~d~iDl~~lh~~--~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
+.+.+.+.+-|+..|.+.+|+-. +.. +++.+..+....+.+.+.+|.. +.|-+|....-.-..+.+..++.+..+.
T Consensus 35 ~~lKe~i~~~L~~~G~eV~D~G~-~s~~d~~svDYPd~a~~vA~~V~~g~~d~GIliCGTGiG~sIAANKv~GIRAAlc~ 113 (231)
T 3c5y_A 35 AVVHEALTTVAEPLGHKVFNYGM-YTAEDKASLTYVMNGLLAGILLNSGAADFVVTGCGTGMGSMLAANAMPGVFCGLVI 113 (231)
T ss_dssp HHHHHHHHHHHGGGTCEEEECCC-CSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESSSHHHHHHHHTSTTCCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEeCC-CCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCCcHHHHHHHhcCCCeEEEEeC
Confidence 47899999999999998888753 332 2356788888888899999987 7888888888776667666666655542
Q ss_pred cCccccchhhhHHHHHHHh-CCcEEeccc
Q 025707 186 WSLWARDIENEIVPLCREL-GIGIVPYCP 213 (249)
Q Consensus 186 ~n~~~~~~~~~~~~~~~~~-gi~v~a~sp 213 (249)
+......+++| +..|++...
T Consensus 114 --------d~~sA~laR~HNnANVL~lGa 134 (231)
T 3c5y_A 114 --------DPTDAFLFGQINDGNAISMPY 134 (231)
T ss_dssp --------SHHHHHHHHHHTCCSEEEEES
T ss_pred --------CHHHHHHHHHhcCccEEEECC
Confidence 13344455544 667776554
No 301
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=22.83 E-value=2.4e+02 Score=21.08 Aligned_cols=95 Identities=14% Similarity=-0.047 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
--.+++.+.+-|+..|.+.+|+-- +..+...+..+....+.+.+.+|.. +.|-+|....-.-..+.+...+.+..+.
T Consensus 14 G~~lK~~i~~~L~~~G~eV~D~G~-~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~siaANKv~GIRAAl~~- 91 (162)
T 2vvp_A 14 GYELKQRIIEHLKQTGHEPIDCGA-LRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCALAW- 91 (162)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECSC-CSCCTTCCHHHHHHHHHHHHHHSTTCEEEEEESSSHHHHHHHHTSTTCCEEECC-
T ss_pred hHHHHHHHHHHHHHCCCEEEEeCC-CCCCCCCChHHHHHHHHHHHHcCCCceEEEEeCCcHHHHHHHhcCCCeEEEEeC-
Confidence 345788899999999998888753 3333356788888888888888875 6788888887666666666666655442
Q ss_pred CccccchhhhHHHHHHHh-CCcEEec
Q 025707 187 SLWARDIENEIVPLCREL-GIGIVPY 211 (249)
Q Consensus 187 n~~~~~~~~~~~~~~~~~-gi~v~a~ 211 (249)
+......+++| +..|++.
T Consensus 92 -------d~~sA~~ar~hNnaNVL~l 110 (162)
T 2vvp_A 92 -------SVQTAALAREHNNAQLIGI 110 (162)
T ss_dssp -------SHHHHHHHHHTTCCSEEEE
T ss_pred -------CHHHHHHHHHhCCCcEEEE
Confidence 12344445554 5555554
No 302
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=22.68 E-value=1.7e+02 Score=20.58 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=34.4
Q ss_pred eeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCC
Q 025707 127 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGI 206 (249)
Q Consensus 127 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi 206 (249)
+|+..+-.| .+.+.+.++++.+.| ++.+=++.- + .++++.+.|+++||
T Consensus 59 vDlavi~~p-----~~~v~~~v~e~~~~g-~k~v~~~~G-------------~-------------~~~e~~~~a~~~Gi 106 (122)
T 3ff4_A 59 VDTVTLYIN-----PQNQLSEYNYILSLK-PKRVIFNPG-------------T-------------ENEELEEILSENGI 106 (122)
T ss_dssp CCEEEECSC-----HHHHGGGHHHHHHHC-CSEEEECTT-------------C-------------CCHHHHHHHHHTTC
T ss_pred CCEEEEEeC-----HHHHHHHHHHHHhcC-CCEEEECCC-------------C-------------ChHHHHHHHHHcCC
Confidence 788877665 566777777777776 354433321 0 02578888888888
Q ss_pred cEEe
Q 025707 207 GIVP 210 (249)
Q Consensus 207 ~v~a 210 (249)
.++.
T Consensus 107 rvv~ 110 (122)
T 3ff4_A 107 EPVI 110 (122)
T ss_dssp EEEE
T ss_pred eEEC
Confidence 8874
No 303
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=22.46 E-value=2.3e+02 Score=20.66 Aligned_cols=86 Identities=12% Similarity=0.167 Sum_probs=58.5
Q ss_pred cceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCe-EeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcc
Q 025707 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITF-FDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTS 101 (249)
Q Consensus 23 ~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~-~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~ 101 (249)
+|-+||.+ |-++.++++..+-|+.++..|.+. ++-+.. ..+|...+-+-|+....
T Consensus 2 ~~~~etfS----yLP~ltdeqI~kQI~YlL~qGw~p~lE~~d~---------------~~~r~~yW~mWkLPmF~----- 57 (139)
T 1bxn_I 2 RITQGTFS----FLPELTDEQITKQLEYCLNQGWAVGLEYTDD---------------PHPRNTYWEMFGLPMFD----- 57 (139)
T ss_dssp CCCCSBTT----TSSCCCHHHHHHHHHHHHHHTCEEEEEEESC---------------CCTTCCCCEESSSCBTT-----
T ss_pred ceecceec----cCCCCCHHHHHHHHHHHHHCCCeEEEEeccC---------------CccccCEEeecCCCCcC-----
Confidence 35567764 445678999999999999998753 232221 12465555555554332
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCceeEEEeecC
Q 025707 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV 135 (249)
Q Consensus 102 ~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~ 135 (249)
..+++.+...|+++++.---.||=|+-+.+.
T Consensus 58 ---~td~~~Vl~Ele~C~k~~p~~YVRliGfD~~ 88 (139)
T 1bxn_I 58 ---LRDAAGILMEINNARNTFPNHYIRVTAFDST 88 (139)
T ss_dssp ---CCCHHHHHHHHHHHHHHCSSSEEEEEEECTT
T ss_pred ---CCCHHHHHHHHHHHHHHCCCCeEEEEEEeCC
Confidence 3568899999999999887777777766543
No 304
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=22.28 E-value=1.2e+02 Score=25.76 Aligned_cols=56 Identities=11% Similarity=0.074 Sum_probs=35.0
Q ss_pred CCHHHHHHHhhc-CCceEEeeecCccccc-hhhhHHHHHHHhCCcEEecccCcccccC
Q 025707 165 ASPDTIRRAHAV-HPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFG 220 (249)
Q Consensus 165 ~~~~~l~~~~~~-~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl~~G~l~ 220 (249)
.+.+.+++++.. ....++..+.|+.-.. ...++.+.|+++|+.++.=..++.|.+.
T Consensus 140 ~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~ 197 (400)
T 3nmy_A 140 TDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQ 197 (400)
T ss_dssp TSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC
T ss_pred CCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 356667666543 2333444445543222 1388999999999999987777655543
No 305
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=22.24 E-value=3.3e+02 Score=22.43 Aligned_cols=55 Identities=20% Similarity=0.079 Sum_probs=33.5
Q ss_pred CCHHHHHHHhhc-CCceEEeeecCccccc-hhhhHHHHHHHhCCcEEecccCccccc
Q 025707 165 ASPDTIRRAHAV-HPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFF 219 (249)
Q Consensus 165 ~~~~~l~~~~~~-~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl~~G~l 219 (249)
.+.+.++++++. ....++..+.|+.-.. ...++.+.|+++|+.++.=.....+..
T Consensus 125 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 181 (386)
T 1cs1_A 125 GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPAL 181 (386)
T ss_dssp TCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT
T ss_pred CCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 356666666543 3344444444442211 237899999999999998777665544
No 306
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=22.16 E-value=64 Score=22.49 Aligned_cols=21 Identities=14% Similarity=0.134 Sum_probs=18.7
Q ss_pred hhHHHHHHHhCCcEEecccCc
Q 025707 195 NEIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~ 215 (249)
++.+.||+++|+......|-.
T Consensus 62 E~AiayAek~G~~y~V~ep~~ 82 (106)
T 2jya_A 62 EQAEAYAQRKGIEYRVILPKE 82 (106)
T ss_dssp HHHHHHHHHHTCEEEECCCTT
T ss_pred HHHHHHHHHcCCEEEEeCCCc
Confidence 789999999999999888754
No 307
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=22.14 E-value=1.3e+02 Score=20.04 Aligned_cols=60 Identities=15% Similarity=-0.011 Sum_probs=32.0
Q ss_pred CceeEEEeecCCCCCCHHHHHHHHHHHHHc---CCeeEEEcCCCCHHHHHHHhhcCCceEEeeecC
Q 025707 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEE---GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187 (249)
Q Consensus 125 d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n 187 (249)
..+|++++...-...+ .++.++++++. ..+.-|-++........++......+++.-+++
T Consensus 46 ~~~dlvi~d~~l~~~~---g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~ 108 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMD---GYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVK 108 (133)
T ss_dssp SCCSEEEECSSCSSSC---HHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCC
T ss_pred CCCCEEEEeCCCCCCC---HHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCC
Confidence 4689999976544333 44555566654 367778888765444444444443344444443
No 308
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=22.06 E-value=2.8e+02 Score=22.43 Aligned_cols=104 Identities=16% Similarity=0.139 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHHc--CCCeEeCCCCcCCCchHHHHHHHHH--cCCCCCeEEEecccccccCCcccccCCCHHHH
Q 025707 36 NSPLSEEDGISIIKHAFSK--GITFFDTADKYGPYTNEILLGKALK--ELPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (249)
Q Consensus 36 ~~~~~~~~~~~~l~~A~~~--Gi~~~Dta~~Yg~g~se~~lg~~l~--~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i 111 (249)
++..+.++..++++.|.+. |+.-+=..+.|- ....+.|+ ..+ .+-|+|-++.+... .+.+..
T Consensus 22 ~p~~t~~~i~~lc~eA~~~~~~~~aVcV~p~~v-----~~a~~~L~~~g~~--~v~v~tVigFP~G~-------~~~~~K 87 (260)
T 1p1x_A 22 NDDDTDEKVIALCHQAKTPVGNTAAICIYPRFI-----PIARKTLKEQGTP--EIRIATVTNFPHGN-------DDIDIA 87 (260)
T ss_dssp CTTCCHHHHHHHHHHTEETTEECSEEECCGGGH-----HHHHHHHHHTTCT--TSEEEEEESTTTCC-------SCHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCceEEEECHHHH-----HHHHHHhhhcCCC--CceEEEEeCCCCCC-------CcHHHH
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE 154 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~ 154 (249)
...+++.++. |.|-||+++--..-...+.+.+.+.+.+.++.
T Consensus 88 v~E~~~Av~~-GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a 129 (260)
T 1p1x_A 88 LAETRAAIAY-GADEVDVVFPYRALMAGNEQVGFDLVKACKEA 129 (260)
T ss_dssp HHHHHHHHHH-TCSEEEEECCHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEEeccHHhhhCCCHHHHHHHHHHHHHH
No 309
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=21.87 E-value=2.9e+02 Score=23.25 Aligned_cols=111 Identities=13% Similarity=0.230 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCCeeEEEcCCCCH--HHHHHHhhcCCceEEeee
Q 025707 110 YVRSCCEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYIGLSEASP--DTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 110 ~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~--~~l~~~~~~~~~~~~q~~ 185 (249)
.+.+.+.+.|++.+++.-. +.+.-.+. ..+.+.+.+.+.+|++.|- .|.+.+|.. ..+. .+...+++.+=++
T Consensus 243 ~~~~~l~~~l~~~~~~~~~-l~lEitE~~~~~~~~~~~~~l~~l~~~G~--~ialDDfG~g~ssl~-~L~~l~~d~iKiD 318 (400)
T 3sy8_A 243 ALAENISALLTEFHLPPSS-VMFEITETGLISAPASSLENLVRLWIMGC--GLAMDDFGAGYSSLD-RLCEFPFSQIKLD 318 (400)
T ss_dssp THHHHHHHHHHHTTCCGGG-EEEEEEHHHHHTCCHHHHHHHHHHHHHTC--EEEEEEECSCSGGGG-SSSSCCCSEEEEC
T ss_pred HHHHHHHHHHHHcCCChHH-eEEEecCCchhcCHHHHHHHHHHHHHCCC--EEEEECCCCchhhHH-HHHhCCCCEEEEC
Confidence 3567788888888874322 22221111 1334677889999999997 444433321 1111 1233566766665
Q ss_pred cCcccc--------chhhhHHHHHHHhCCcEEeccc---------------CcccccCCCCC
Q 025707 186 WSLWAR--------DIENEIVPLCRELGIGIVPYCP---------------LGRGFFGGKAV 224 (249)
Q Consensus 186 ~n~~~~--------~~~~~~~~~~~~~gi~v~a~sp---------------l~~G~l~g~~~ 224 (249)
-+++.. ..-..+++.|++.|+.|++=.. +.+|++.+++.
T Consensus 319 ~~~v~~~~~~~~~~~~v~~i~~~a~~l~~~vvaEGVEt~~~~~~l~~~g~~~~QGy~~~~P~ 380 (400)
T 3sy8_A 319 RTFVQKMKTQPRSCAVISSVVALAQALGISLVVEGVESDEQRVRLIELGCSIAQGYLFARPM 380 (400)
T ss_dssp THHHHHHHHCTTHHHHHHHHHHHHHHHTCEEEECCCCCHHHHHHHHHHTCCEECBTTTBCCB
T ss_pred HHHHhhhhcChhHHHHHHHHHHHHHHcCCeEEEecCCcHHHHHHHHHcCCCEEEcCeecCcC
Confidence 444321 1226789999999999998764 68888888853
No 310
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=21.84 E-value=3.7e+02 Score=22.84 Aligned_cols=97 Identities=14% Similarity=0.198 Sum_probs=54.8
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCC-eeEEEcCCCCHHHHHHHhhcCCceEEe
Q 025707 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQ 183 (249)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q 183 (249)
.++.+. ...+-+.|.++|+++|.+-. |.. .....+.++.+++.+. ++..++.-...+.++.+.+. .++.+.
T Consensus 21 ~~~~~~-k~~ia~~L~~~Gv~~IE~g~---p~~---~~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~a~~~-g~~~v~ 92 (382)
T 2ztj_A 21 NFSTQD-KVEIAKALDEFGIEYIEVTT---PVA---SPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKVAVET-GVQGID 92 (382)
T ss_dssp CCCHHH-HHHHHHHHHHHTCSEEEECC---TTS---CHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHT-TCSEEE
T ss_pred CcCHHH-HHHHHHHHHHcCcCEEEEcC---CcC---CHHHHHHHHHHHhcCCCcEEEEEcccChhhHHHHHHc-CCCEEE
Confidence 344444 34566677889999999843 322 2345566777776654 33334444456777777765 233333
Q ss_pred eecCccc-------c------chhhhHHHHHHHhC--CcEE
Q 025707 184 LEWSLWA-------R------DIENEIVPLCRELG--IGIV 209 (249)
Q Consensus 184 ~~~n~~~-------~------~~~~~~~~~~~~~g--i~v~ 209 (249)
+..+.-+ . ....+.+++++++| +.|.
T Consensus 93 i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~ 133 (382)
T 2ztj_A 93 LLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVR 133 (382)
T ss_dssp EEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3211111 0 11267889999999 7654
No 311
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=21.80 E-value=90 Score=27.58 Aligned_cols=47 Identities=15% Similarity=0.165 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK 158 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 158 (249)
.+...+.+.+.+++||+.+.|.+ +......+.+.+.+++|+++|.+-
T Consensus 89 ~~~~~~~f~~~~~~LgI~~~d~~----~r~t~~~~~~~~~i~~L~~~G~aY 135 (461)
T 1li5_A 89 VDRMIAEMHKDFDALNILRPDME----PRATHHIAEIIELTEQLIAKGHAY 135 (461)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSBC----CBGGGCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHHcCCCCCccc----ccccchHHHHHHHHHHHHHCCCEE
Confidence 45678889999999999877753 223346788999999999999874
No 312
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=21.39 E-value=3.7e+02 Score=22.71 Aligned_cols=132 Identities=17% Similarity=0.097 Sum_probs=71.0
Q ss_pred CCHHHHHHHHH-------HHHHcCCCeEeC--CC-----------------CcCCCchHH---HHHH---HHHc-CCCCC
Q 025707 39 LSEEDGISIIK-------HAFSKGITFFDT--AD-----------------KYGPYTNEI---LLGK---ALKE-LPREN 85 (249)
Q Consensus 39 ~~~~~~~~~l~-------~A~~~Gi~~~Dt--a~-----------------~Yg~g~se~---~lg~---~l~~-~~r~~ 85 (249)
++.++..++++ .|.++|+..++. |. .|| |.-|. .+-+ ++++ ...+
T Consensus 143 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yG-GslenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 143 LETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYG-GSLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCC-CchhhHHHHHHHHHHHHHHhcCCC-
Confidence 56777766654 467899999884 22 344 23232 2222 2222 3333
Q ss_pred eEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC
Q 025707 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 165 (249)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 165 (249)
-|.-|+.......+. ....+..--..+-+.|+..|+|+|++ |...... +. ..++++.=.+--|+....
T Consensus 221 -~v~vRls~~~~~~g~--~~~~~~~~~~~la~~l~~~Gvd~i~v---~~~~~~~---~~---~~~ik~~~~iPvi~~Ggi 288 (362)
T 4ab4_A 221 -RVGVHLAPRADAHDM--GDADRAETFTYVARELGKRGIAFICS---REREADD---SI---GPLIKEAFGGPYIVNERF 288 (362)
T ss_dssp -GEEEEECTTCCSSSC--CCTTHHHHHHHHHHHHHHTTCSEEEE---ECCCCTT---CC---HHHHHHHHCSCEEEESSC
T ss_pred -ceEEEeecccccccc--CCCCcHHHHHHHHHHHHHhCCCEEEE---CCCCCCH---HH---HHHHHHHCCCCEEEeCCC
Confidence 355677643211000 01112222345667788889877664 5443211 12 233333324556777777
Q ss_pred CHHHHHHHhhcCCceEEee
Q 025707 166 SPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 166 ~~~~l~~~~~~~~~~~~q~ 184 (249)
+++..+++++....+.+.+
T Consensus 289 t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 289 DKASANAALASGKADAVAF 307 (362)
T ss_dssp CHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHcCCccEEEE
Confidence 8999999998877777776
No 313
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.14 E-value=1.8e+02 Score=22.67 Aligned_cols=22 Identities=23% Similarity=0.335 Sum_probs=17.6
Q ss_pred ccchhhhHHHHHHHhCCcEEec
Q 025707 190 ARDIENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 190 ~~~~~~~~~~~~~~~gi~v~a~ 211 (249)
++..+...+..|...||++++.
T Consensus 119 Dp~~d~~ai~EA~~l~IP~Ial 140 (202)
T 3j20_B 119 DPRADHQAMREAVEIGIPIVAL 140 (202)
T ss_dssp CTTTSHHHHHHHHHHTCCEEEE
T ss_pred CCccchHHHHHHHHcCCCEEEE
Confidence 4444577999999999999974
No 314
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=21.00 E-value=3.7e+02 Score=22.47 Aligned_cols=150 Identities=13% Similarity=0.019 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCC--chHHHHHHHHHc-----CCCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPY--TNEILLGKALKE-----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g--~se~~lg~~l~~-----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
.+...+.+..+++.+.. .|+.. .-++.+.+++.. ...+++++++= ..+
T Consensus 76 ~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g-------------------~~e 130 (421)
T 3l8a_A 76 VPEIKEAIINYGREHIF------GYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDG-------------------VVP 130 (421)
T ss_dssp CHHHHHHHHHHHHHCCS------SCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESC-------------------HHH
T ss_pred CHHHHHHHHHHHhcCCc------CCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCC-------------------HHH
Confidence 35566777777765542 23221 344556666653 23455655431 123
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC--C----CCHHHHHHHhhcCC--ceEEeee
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS--E----ASPDTIRRAHAVHP--ITAVQLE 185 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs--~----~~~~~l~~~~~~~~--~~~~q~~ 185 (249)
+++..++.+ +..=|-+++..|... .....++. ....+..+-+. + .+.+.+++++...+ ..++..+
T Consensus 131 a~~~a~~~~-~~~gd~Vi~~~~~y~----~~~~~~~~--~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p 203 (421)
T 3l8a_A 131 AISIALQAF-SEKGDAVLINSPVYY----PFARTIRL--NDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSP 203 (421)
T ss_dssp HHHHHHHHH-SCTEEEEEEEESCCH----HHHHHHHH--TTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESS
T ss_pred HHHHHHHHh-cCCCCEEEECCCCcH----HHHHHHHH--CCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCC
Confidence 334444444 234466777665331 12222221 12344555442 2 47889988876323 3333334
Q ss_pred cCcccc----chhhhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 186 WSLWAR----DIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 186 ~n~~~~----~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
.|+.-. ....++.+.|+++|+-++.=........+|+
T Consensus 204 ~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~ 244 (421)
T 3l8a_A 204 HNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGN 244 (421)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 444321 2238899999999999998777665445554
No 315
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=20.77 E-value=3.5e+02 Score=22.10 Aligned_cols=147 Identities=8% Similarity=0.075 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (249)
.....++-....+.|+|..|.+..-. .....++...-+... ..+.+.+++.++..-+
T Consensus 18 ~GIVa~Vs~~La~~g~NI~d~~q~~d--------------~~~g~Ffmr~~~~~~---------~~~~~~L~~~f~~la~ 74 (287)
T 3nrb_A 18 PGIVSEVSTFLFNNGANIVEAEQFND--------------EDSSKFFMRVSVEIP---------VAGVNDFNSAFGKVVE 74 (287)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEE--------------TTTTEEEEEEEEECC---------C---CHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHCCCCEEeeeeeec--------------CCCCeEEEEEEEEcC---------CCCHHHHHHHHHHHHH
Confidence 34455555666699999999876421 123344443333211 1234578888888888
Q ss_pred HcCCCceeEEEeecCCCCCC-------HHHHHHHHHHHHHcCCe--eEE-EcCCCCHHHHHHHhhcCCceEEeeecCccc
Q 025707 121 RLDVEYIDLYYQHRVDTSVP-------IEETIGEMKKLVEEGKI--KYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWA 190 (249)
Q Consensus 121 ~Lg~d~iDl~~lh~~~~~~~-------~~~~~~~l~~l~~~G~i--r~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (249)
+++++ +.+|..+.... ...-+++|-...+.|.. .-. -+||+... +.+..+...+-+.+++...-.
T Consensus 75 ~~~m~----~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~A~~~gIp~~~~~~~~~~ 149 (287)
T 3nrb_A 75 KYNAE----WWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPRE-ALSVSLVGDIPFHYLPVTPAT 149 (287)
T ss_dssp GGTCE----EEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCCCCCTTSCEEECCCCGGG
T ss_pred HcCCe----eEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHHHHHcCCCEEEEeccCcc
Confidence 88874 44454333211 12345555555556643 222 34666532 333333455666666554422
Q ss_pred cc-hhhhHHHHHHHhCCcEEecccCc
Q 025707 191 RD-IENEIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 191 ~~-~~~~~~~~~~~~gi~v~a~spl~ 215 (249)
+. .+.++++..++.++.++.-.-++
T Consensus 150 r~~~~~~~~~~l~~~~~Dlivlagym 175 (287)
T 3nrb_A 150 KAAQESQIKNIVTQSQADLIVLARYM 175 (287)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEESSCC
T ss_pred hhhHHHHHHHHHHHhCCCEEEhhhhh
Confidence 32 23678999999988887655553
No 316
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=20.70 E-value=3.5e+02 Score=22.15 Aligned_cols=149 Identities=6% Similarity=-0.056 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-----CCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
++..+.+..+++.+...+- +..|...-++.+.+.+.. ...+++++++= .. +++.
T Consensus 47 ~~v~~a~~~~~~~~~~~y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g---------------~~----~al~ 105 (391)
T 3h14_A 47 RGAVEALAKSLETDALGYT--VALGLPALRQRIARLYGEWYGVDLDPGRVVITPG---------------SS----GGFL 105 (391)
T ss_dssp HHHHHHHHHHHC------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESS---------------HH----HHHH
T ss_pred HHHHHHHHHHHhcCCCCCC--CCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecC---------------hH----HHHH
Confidence 4566677777765432111 111111356666666653 24456655431 12 2233
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC-CeeEEEcC---CC--CHHHHHHHhhcCCceEEeeecCccc
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLS---EA--SPDTIRRAHAVHPITAVQLEWSLWA 190 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvs---~~--~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (249)
..+..+ ++.=|-+++..|... .....+ ...| ++..+-+. ++ +++.++++ .....++..+.|+.-
T Consensus 106 ~~~~~l-~~~gd~vl~~~p~~~----~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~--~~~~v~i~~p~nptG 175 (391)
T 3h14_A 106 LAFTAL-FDSGDRVGIGAPGYP----SYRQIL---RALGLVPVDLPTAPENRLQPVPADFAGL--DLAGLMVASPANPTG 175 (391)
T ss_dssp HHHHHH-CCTTCEEEEEESCCH----HHHHHH---HHTTCEEEEEECCGGGTTSCCHHHHTTS--CCSEEEEESSCTTTC
T ss_pred HHHHHh-cCCCCEEEEcCCCCc----cHHHHH---HHcCCEEEEeecCcccCCCCCHHHHHhc--CCeEEEECCCCCCCC
Confidence 333333 122256666555331 222222 2233 45555554 12 66666555 233444445555432
Q ss_pred c----chhhhHHHHHHHhCCcEEecccCcccccCC
Q 025707 191 R----DIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (249)
Q Consensus 191 ~----~~~~~~~~~~~~~gi~v~a~spl~~G~l~g 221 (249)
. ....++.+.|+++|+.++.=.........+
T Consensus 176 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~ 210 (391)
T 3h14_A 176 TMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEA 210 (391)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCC
Confidence 1 123789999999999999766665444444
No 317
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=20.57 E-value=3.4e+02 Score=21.97 Aligned_cols=151 Identities=7% Similarity=-0.025 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-----CCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
.+...+.+..+++.+...+- + .+ ..-++.+.+.+.. ...+++++++= ..+.+
T Consensus 38 ~~~v~~a~~~~~~~~~~~y~--~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g---------------~~~a~---- 94 (377)
T 3fdb_A 38 CPAVLQAITDAVQREAFGYQ--P-DG-SLLSQATAEFYADRYGYQARPEWIFPIPD---------------VVRGL---- 94 (377)
T ss_dssp CHHHHHHHHHHHHTTCCSSC--C-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESC---------------HHHHH----
T ss_pred CHHHHHHHHHHHHcCCCCCC--C-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCC---------------hHHHH----
Confidence 35567777778877643221 2 22 3577888888864 34456665431 12223
Q ss_pred HHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-CCHHHHHHHhhc-CCceEEeeecCcccc--
Q 025707 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPDTIRRAHAV-HPITAVQLEWSLWAR-- 191 (249)
Q Consensus 116 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~-~~~~~~q~~~n~~~~-- 191 (249)
...+..+ ++.=|-+++..|... .....++. .-..+..+-+.. .+++.+++++.. ....++..+.|+.-.
T Consensus 95 ~~~~~~~-~~~gd~vl~~~~~~~----~~~~~~~~--~g~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~ 167 (377)
T 3fdb_A 95 YIAIDHF-TPAQSKVIVPTPAYP----PFFHLLSA--TQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVF 167 (377)
T ss_dssp HHHHHHH-SCTTCCEEEEESCCT----HHHHHHHH--HTCCEEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCC
T ss_pred HHHHHHh-cCCCCEEEEcCCCcH----hHHHHHHH--cCCEEEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCC
Confidence 3333333 112244556555332 12222221 123455554322 477888887765 444445555555322
Q ss_pred --chhhhHHHHHHHhCCcEEecccCcccccCC
Q 025707 192 --DIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (249)
Q Consensus 192 --~~~~~~~~~~~~~gi~v~a~spl~~G~l~g 221 (249)
....++.+.|+++|+.++.=........++
T Consensus 168 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g 199 (377)
T 3fdb_A 168 APEWLNELCDLAHRYDARVLVDEIHAPLVFDG 199 (377)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS
T ss_pred CHHHHHHHHHHHHHcCCEEEEEcccchhhcCC
Confidence 123788999999999999877766544444
No 318
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=20.56 E-value=3.3e+02 Score=21.75 Aligned_cols=164 Identities=11% Similarity=0.049 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CchHHHHHHHHHc----CCCCCeEEEecccccccCCcccccCCCHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-g~se~~lg~~l~~----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~ 114 (249)
+.+++.+.++.+.+.|...++---.|-. -.+...+.+.+.. ...-.++++.+..... ...+..+.+.-.+-
T Consensus 30 ~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eG----G~~~~~~~~~~~~l 105 (257)
T 2yr1_A 30 DDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREG----GQPIPLNEAEVRRL 105 (257)
T ss_dssp SHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTT----CCCCSSCHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccC----CCCCCCCHHHHHHH
Confidence 6788888899999999988865433321 1122334443332 2234455555433221 11223455554455
Q ss_pred HHHHHHHcC-CCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC------CHHHHHHHhhc---CCceEEee
Q 025707 115 CEASLRRLD-VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA------SPDTIRRAHAV---HPITAVQL 184 (249)
Q Consensus 115 ~~~sL~~Lg-~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~------~~~~l~~~~~~---~~~~~~q~ 184 (249)
++..+ ++| .||+|+=+-+ + . .+..+.+..+++.++-|+ |.| +.+.+...+.. .+.+++=+
T Consensus 106 l~~~~-~~g~~d~iDvEl~~-~--~-----~~~~l~~~~~~~~~kvI~-S~Hdf~~tP~~~el~~~~~~~~~~gaDivKi 175 (257)
T 2yr1_A 106 IEAIC-RSGAIDLVDYELAY-G--E-----RIADVRRMTEECSVWLVV-SRHYFDGTPRKETLLADMRQAERYGADIAKV 175 (257)
T ss_dssp HHHHH-HHTCCSEEEEEGGG-T--T-----HHHHHHHHHHHTTCEEEE-EEEESSCCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHH-HcCCCCEEEEECCC-C--h-----hHHHHHHHHHhCCCEEEE-EecCCCCCcCHHHHHHHHHHHHhcCCCEEEE
Confidence 55444 567 8999985432 1 1 333444444566666665 444 22343333221 34444444
Q ss_pred ecCccccchhhhHHHHHHH----hCCcEEecccCccc
Q 025707 185 EWSLWARDIENEIVPLCRE----LGIGIVPYCPLGRG 217 (249)
Q Consensus 185 ~~n~~~~~~~~~~~~~~~~----~gi~v~a~spl~~G 217 (249)
-..+-+......++.+..+ .++++++++.=..|
T Consensus 176 a~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G 212 (257)
T 2yr1_A 176 AVMPKSPEDVLVLLQATEEARRELAIPLITMAMGGLG 212 (257)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECTTTT
T ss_pred EeccCCHHHHHHHHHHHHHHhccCCCCEEEEECCCCc
Confidence 3333333222334443332 26778776554444
No 319
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=20.52 E-value=2.3e+02 Score=23.92 Aligned_cols=44 Identities=11% Similarity=0.131 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHH
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLV 152 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~ 152 (249)
.+++.+.+.+++..+.+|+|+ ++++.+....+.++..+.|+.+.
T Consensus 309 Gtpe~va~~l~~~~~~~G~d~---~~l~~~~~~~~~~~~~~~l~~~a 352 (376)
T 2i7g_A 309 GEPELVAEKIIKAHGVFKNDR---FLLQMAIGLMPHDQIMRGIELYG 352 (376)
T ss_dssp ESHHHHHHHHHHHHHHHCCSE---EEEECCCTTCCHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHhcCCCe---EEEEeCCCCCCHHHHHHHHHHHH
Confidence 378888888888888888876 44443333334444444444443
No 320
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=20.39 E-value=1.8e+02 Score=25.75 Aligned_cols=31 Identities=10% Similarity=0.304 Sum_probs=25.2
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCeEeCC
Q 025707 32 SGCYNSPLSEEDGISIIKHAFSKGITFFDTA 62 (249)
Q Consensus 32 ~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta 62 (249)
.|.||.+-+.++-.++++..-+.|.|.+=-|
T Consensus 7 EGFYG~PWS~e~R~~l~~f~g~~kmNtYiYA 37 (447)
T 2xsa_A 7 EGFYGRDWRRDERATVMDWIAAAGMNTYIYG 37 (447)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eccCCCCCCHHHHHHHHHHHHHcCCceEEEc
Confidence 4557777789999999999999999988433
No 321
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=20.29 E-value=4.8e+02 Score=23.57 Aligned_cols=109 Identities=13% Similarity=-0.056 Sum_probs=59.9
Q ss_pred CcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEeccccccc
Q 025707 18 GLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVEL 97 (249)
Q Consensus 18 g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~ 97 (249)
|..+-.-|.+-.......+...+.+...+-++..-+.|+|.+=|+ +|. .++..+-.|-+. -++|..-+.....
T Consensus 320 G~~~~l~G~~~h~~~~~~g~~~~~~~~~~d~~~~k~~G~N~vR~~-h~p--~~~~~~~~cD~~----Gi~V~~e~~~~~~ 392 (613)
T 3hn3_A 320 GKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTS-HYP--YAEEVMQMCDRY----GIVVIDECPGVGL 392 (613)
T ss_dssp TEEECEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECT-TSC--CCHHHHHHHHHH----TCEEEEECSCBCC
T ss_pred CEEeeeceeeecCCccccCccCCHHHHHHHHHHHHHcCCCEEEcc-CCC--ChHHHHHHHHHC----CCEEEEecccccc
Confidence 333444444333222233445678888888999999999999996 565 356555444332 2333322211110
Q ss_pred CCcccccCCC---HHHHHHHHHHHHHHcCCCceeEEEeecCCC
Q 025707 98 GFTSVIVKGT---PEYVRSCCEASLRRLDVEYIDLYYQHRVDT 137 (249)
Q Consensus 98 ~~~~~~~~~s---~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~ 137 (249)
. .....+ .+...+.+++..+|.. .|.-+++..--++
T Consensus 393 ~---~~~~~~~~~~~~~~~~~~~~v~r~~-nhPSIi~W~~~NE 431 (613)
T 3hn3_A 393 A---LPQFFNNVSLHHHMQVMEEVVRRDK-NHPAVVMWSVANE 431 (613)
T ss_dssp C---SGGGCCHHHHHHHHHHHHHHHHHHT-TCTTEEEEEEEES
T ss_pred c---cccccChHHHHHHHHHHHHHHHHhC-CCCeEEEEecccC
Confidence 0 000112 2446677888888887 6777776654333
No 322
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=20.23 E-value=4.3e+02 Score=22.98 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEeCC
Q 025707 37 SPLSEEDGISIIKHAFSKGITFFDTA 62 (249)
Q Consensus 37 ~~~~~~~~~~~l~~A~~~Gi~~~Dta 62 (249)
..++.++-.++++...++|+..|+..
T Consensus 56 ~~~s~eeKl~Ia~~L~~~Gv~~IEvG 81 (423)
T 3ivs_A 56 AFFDTEKKIQIAKALDNFGVDYIELT 81 (423)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEEe
Confidence 34688999999999999999999985
No 323
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=20.17 E-value=2.6e+02 Score=20.37 Aligned_cols=85 Identities=16% Similarity=0.144 Sum_probs=57.5
Q ss_pred cceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCe-EeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcc
Q 025707 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITF-FDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTS 101 (249)
Q Consensus 23 ~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~-~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~ 101 (249)
+|-+||.+ |-++.++++..+-|+.++..|.+. ++.+.. ..+|...+-+-|+....
T Consensus 2 ~~~~etfS----yLP~ltdeqI~kQI~Yll~qGw~p~iEf~d~---------------~~~r~~yW~mWkLPmF~----- 57 (138)
T 1bwv_S 2 RITQGTFS----FLPDLTDEQIKKQIDYMISKKLAIGIEYTND---------------IHPRNAYWEIWGLPLFD----- 57 (138)
T ss_dssp CCCCSTTT----TSCCCCHHHHHHHHHHHHHTTCEEEEEEESC---------------CCTTCCCCEECSSCBCS-----
T ss_pred ceecceec----cCCCCCHHHHHHHHHHHHHCCCeeeEEecCC---------------CCCccCEEeccCCCCcC-----
Confidence 35567764 445678999999999999999753 333221 12466666665654332
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCceeEEEeec
Q 025707 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHR 134 (249)
Q Consensus 102 ~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~ 134 (249)
..+++.+...|+++++.---.||=|+-+.+
T Consensus 58 ---~td~~~Vl~Ele~C~k~~p~~YVRliGfD~ 87 (138)
T 1bwv_S 58 ---VTDPAAVLFEINACRKARSNFYIKVVGFSS 87 (138)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTSEEEEEEEEC
T ss_pred ---CCCHHHHHHHHHHHHHHCCCCeEEEEEEeC
Confidence 356889999999999888766766665544
No 324
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=20.16 E-value=93 Score=22.86 Aligned_cols=50 Identities=4% Similarity=0.143 Sum_probs=33.9
Q ss_pred HHHHHHHHHcCCCc--eeEEEeecCCCC-CCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 113 SCCEASLRRLDVEY--IDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~--iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
..+.+.|+.+.-.. +|.+++...|.. -...+++..++.|.+.| |+-+-+.
T Consensus 60 p~l~~ll~~~~~g~~~~d~lvv~~ldRl~R~~~~~~~~~~~l~~~g-v~l~~~~ 112 (167)
T 3guv_A 60 IQFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQIMQDYG-VNLICVE 112 (167)
T ss_dssp HHHHHHHHHHHTCTTCCSEEEESCGGGTCSSHHHHHHHHHHHHHTT-CEEEETT
T ss_pred HHHHHHHHHHHcCCCCccEEEEEeCchhcCCHHHHHHHHHHHHHCC-CEEEEee
Confidence 34555666665444 899999888774 34677888888888776 4555444
No 325
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=20.08 E-value=1.9e+02 Score=24.89 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK 158 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 158 (249)
.+...+.+.+.+++||+...|.+.--. ...+.+.+.+++|+++|.+-
T Consensus 106 ~~~~~~~~~~~~~~Lgi~~~d~~~r~t----~~~~~~~~~~~~L~~kG~~Y 152 (414)
T 3c8z_A 106 GDRETQLFREDMAALRVLPPHDYVAAT----DAIAEVVEMVEKLLASGAAY 152 (414)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEGG----GCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHHHHcCCCCCcceeccc----chHHHHHHHHHHHHHCCCEE
Confidence 466788899999999998678654322 25677888999999999984
Done!