Query 025708
Match_columns 249
No_of_seqs 362 out of 2199
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 15:52:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025708.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025708hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ep6_A MCTP2 protein; beta san 99.9 6.5E-24 2.2E-28 160.3 13.5 128 84-246 4-132 (133)
2 1wfj_A Putative elicitor-respo 99.9 2.4E-23 8.3E-28 157.6 16.4 127 87-248 4-132 (136)
3 2fk9_A Protein kinase C, ETA t 99.9 3.5E-23 1.2E-27 160.3 16.3 122 87-245 23-156 (157)
4 2dmh_A Myoferlin; beta-sandwic 99.9 6E-23 2.1E-27 156.2 17.1 125 90-248 4-135 (140)
5 3kwu_A MUNC13-1; calcium bindi 99.9 2.4E-22 8.3E-27 154.3 17.6 124 87-245 11-146 (148)
6 1gmi_A Protein kinase C, epsil 99.9 1.7E-22 5.9E-27 153.1 15.0 118 90-246 3-133 (136)
7 3b7y_A E3 ubiquitin-protein li 99.9 1.7E-22 5.7E-27 156.1 13.5 131 89-246 16-153 (153)
8 2nq3_A Itchy homolog E3 ubiqui 99.9 3.4E-22 1.2E-26 157.6 15.1 132 89-249 32-164 (173)
9 3m7f_B E3 ubiquitin-protein li 99.9 5.1E-22 1.7E-26 157.0 14.4 131 90-247 5-142 (176)
10 1rlw_A Phospholipase A2, CALB 99.9 3.8E-22 1.3E-26 149.0 12.0 89 92-181 2-98 (126)
11 2b3r_A Phosphatidylinositol-4- 99.9 7.8E-21 2.7E-25 143.6 13.0 109 86-206 13-130 (134)
12 3fbk_A RGS3, RGP3, regulator o 99.8 1.4E-20 4.7E-25 145.4 13.1 116 82-208 16-139 (153)
13 3pyc_A E3 ubiquitin-protein li 99.8 7.7E-20 2.6E-24 137.6 16.0 91 92-183 4-100 (132)
14 1rsy_A Synaptotagmin I; calciu 99.8 1.4E-20 4.8E-25 145.1 12.1 110 85-206 34-150 (152)
15 1tjx_A Similar to synaptotagmi 99.8 9.5E-21 3.3E-25 147.2 11.0 121 86-206 18-147 (159)
16 3n5a_A Synaptotagmin-7; calciu 99.8 3.8E-21 1.3E-25 145.6 8.5 120 85-204 8-136 (138)
17 1a25_A CALB, protein kinase C 99.8 7.7E-21 2.6E-25 146.1 9.9 103 91-206 29-139 (149)
18 3f04_A Synaptotagmin-1; C2A, c 99.8 1.3E-20 4.4E-25 143.8 11.1 110 84-205 25-141 (143)
19 2z0u_A WW domain-containing pr 99.8 4.5E-21 1.5E-25 148.5 8.4 109 85-204 35-153 (155)
20 3rdl_A Protein kinase C alpha 99.8 3.5E-20 1.2E-24 140.2 12.1 104 91-207 14-125 (137)
21 1w15_A Synaptotagmin IV; metal 99.8 1.4E-20 4.9E-25 145.2 9.8 122 85-206 22-152 (153)
22 2d8k_A Synaptotagmin VII; exoc 99.8 4.3E-20 1.5E-24 140.6 12.1 109 85-205 18-134 (141)
23 2cm5_A Rabphilin-3A; protein t 99.8 1.6E-20 5.4E-25 147.0 9.7 122 85-206 29-159 (166)
24 2bwq_A Regulating synaptic mem 99.8 3.2E-20 1.1E-24 139.0 10.8 106 86-204 11-128 (129)
25 3fdw_A Synaptotagmin-like prot 99.8 2.3E-20 7.9E-25 143.3 8.6 111 85-207 15-135 (148)
26 2q3x_A Regulating synaptic mem 99.8 6.6E-20 2.3E-24 144.2 11.2 105 91-207 28-140 (171)
27 2chd_A Rabphilin-3A, exophilin 99.8 1.3E-19 4.4E-24 138.1 10.8 98 85-182 21-128 (142)
28 1wfm_A Synaptotagmin XIII; C2 99.8 2.3E-19 7.9E-24 136.2 11.8 106 86-206 19-132 (138)
29 1rh8_A Piccolo protein; beta-s 99.8 2.8E-20 9.5E-25 141.7 6.6 103 92-206 17-138 (142)
30 1v27_A Regulating synaptic mem 99.8 1.1E-19 3.7E-24 138.1 9.7 109 86-207 14-134 (141)
31 1ugk_A Synaptotagmin IV, KIAA1 99.8 2.6E-19 8.8E-24 135.8 11.6 98 85-182 14-120 (138)
32 3jzy_A Intersectin 2; C2 domai 99.8 1.5E-18 5E-23 158.4 17.3 123 90-246 384-508 (510)
33 2r83_A Synaptotagmin-1; C2A-C2 99.8 9E-19 3.1E-23 148.2 14.3 110 85-206 11-127 (284)
34 2enp_A B/K protein; C2 type 1, 99.8 1.6E-19 5.3E-24 138.4 8.6 97 85-181 18-128 (147)
35 2dmg_A KIAA1228 protein; beta- 99.8 1.8E-19 6.2E-24 137.2 8.9 109 86-206 17-135 (142)
36 2cjs_A UNC-13 homolog A, MUNC1 99.8 1.6E-17 5.3E-22 130.0 15.5 88 91-183 12-100 (167)
37 2cjt_A UNC-13 homolog A, MUNC1 99.8 7.6E-18 2.6E-22 126.7 13.0 87 92-183 4-91 (131)
38 1dqv_A Synaptotagmin III; beta 99.8 5.1E-18 1.7E-22 144.6 13.4 96 85-180 12-115 (296)
39 2r83_A Synaptotagmin-1; C2A-C2 99.7 5.5E-18 1.9E-22 143.4 10.2 119 88-206 145-272 (284)
40 3nsj_A Perforin-1; pore formin 99.7 3.8E-17 1.3E-21 149.1 16.3 93 85-178 386-481 (540)
41 3l9b_A Otoferlin; C2-domain, b 99.7 1.7E-16 5.7E-21 118.9 16.0 89 92-184 20-112 (144)
42 1dqv_A Synaptotagmin III; beta 99.7 1.2E-17 4.2E-22 142.3 3.5 121 87-207 146-276 (296)
43 1cjy_A CPLA2, protein (cytosol 99.7 1.2E-16 4E-21 150.2 9.9 105 90-207 15-127 (749)
44 1djx_A PLC-D1, phosphoinositid 99.7 8.8E-16 3E-20 142.7 13.9 92 91-182 495-596 (624)
45 3bxj_A RAS GTPase-activating p 99.6 1.5E-16 5E-21 144.2 1.1 101 90-206 8-116 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.5 7.8E-14 2.7E-18 131.3 10.6 103 92-207 171-281 (674)
47 1yrk_A NPKC-delta, protein kin 99.3 6.6E-11 2.2E-15 86.1 14.8 115 91-245 4-124 (126)
48 3ohm_B 1-phosphatidylinositol- 99.3 9.1E-12 3.1E-16 119.0 13.2 85 92-183 724-818 (885)
49 3qr0_A Phospholipase C-beta (P 99.3 1.9E-11 6.7E-16 116.0 15.0 85 92-183 649-744 (816)
50 2enj_A NPKC-theta, protein kin 99.3 5.4E-11 1.8E-15 87.6 14.1 119 87-245 4-129 (138)
51 2zkm_X 1-phosphatidylinositol- 99.3 2.9E-11 1E-15 115.1 13.5 86 91-183 676-772 (799)
52 2iqj_A Stromal membrane-associ 99.1 1.8E-11 6.3E-16 91.1 2.8 49 3-54 84-132 (134)
53 2crr_A Stromal membrane-associ 99.1 3.5E-11 1.2E-15 90.3 3.6 49 2-53 85-133 (141)
54 3lju_X ARF-GAP with dual PH do 99.0 1E-10 3.5E-15 102.9 2.7 58 2-59 89-146 (386)
55 2olm_A Nucleoporin-like protei 98.9 3.4E-10 1.2E-14 84.8 1.4 52 2-54 80-132 (140)
56 3jue_A Arfgap with coiled-coil 98.8 4E-09 1.4E-13 92.2 4.3 51 2-52 101-152 (368)
57 1dcq_A PYK2-associated protein 98.0 3.3E-06 1.1E-10 70.6 4.2 49 3-51 74-123 (278)
58 2b0o_E UPLC1; arfgap, structur 98.0 5E-06 1.7E-10 70.3 4.4 48 3-50 99-147 (301)
59 3lvq_E ARF-GAP with SH3 domain 98.0 9.1E-06 3.1E-10 73.5 6.1 50 2-51 79-129 (497)
60 3l4c_A Dedicator of cytokinesi 94.8 0.67 2.3E-05 36.9 12.3 54 125-178 78-138 (220)
61 2owa_A Arfgap-like finger doma 94.7 0.007 2.4E-07 44.8 0.5 40 3-46 93-132 (138)
62 2crw_A ARF GAP 3, ADP-ribosyla 94.7 0.0046 1.6E-07 46.4 -0.5 18 3-20 87-104 (149)
63 2wxf_A Phosphatidylinositol-4, 94.3 0.38 1.3E-05 46.5 11.7 90 89-180 213-324 (940)
64 3hhm_A Phosphatidylinositol-4, 92.7 0.65 2.2E-05 45.5 10.3 90 90-180 352-455 (1091)
65 1e7u_A Phosphatidylinositol 3- 91.9 1.2 4.1E-05 43.2 11.1 91 90-180 215-330 (961)
66 2yrb_A Protein fantom; beta sa 89.6 3.3 0.00011 31.0 9.4 92 90-183 15-119 (156)
67 2p57_A GTPase-activating prote 85.5 0.18 6.3E-06 37.3 0.3 17 3-19 95-111 (144)
68 2y3a_A Phosphatidylinositol-4, 83.7 1.8 6.3E-05 42.5 6.5 89 90-180 350-470 (1092)
69 3dwd_A ADP-ribosylation factor 74.3 0.69 2.4E-05 34.3 0.2 16 3-18 95-110 (147)
70 3sub_A ADP-ribosylation factor 73.8 0.92 3.1E-05 34.2 0.8 21 2-22 78-98 (163)
71 3o47_A ADP-ribosylation factor 41.6 5.7 0.00019 33.3 0.1 17 3-19 94-110 (329)
72 1wi1_A Calcium-dependent activ 20.4 1.1E+02 0.0037 21.8 3.8 18 28-45 92-109 (126)
No 1
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.91 E-value=6.5e-24 Score=160.26 Aligned_cols=128 Identities=28% Similarity=0.470 Sum_probs=109.8
Q ss_pred cccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECCeEEeeeeecCcCCceeeeeEEEEeeCCCccEEEEEEecC
Q 025708 84 KDVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELMLSVPQEYGPVKLEVFDHD 162 (249)
Q Consensus 84 ~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~kT~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~ 162 (249)
.+..+....|.|+|+|++|++|+..+.. .+||||++.++.++++|++++++.||.|||+|.|.+......|.|+|||++
T Consensus 4 ~s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d 83 (133)
T 2ep6_A 4 GSSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDED 83 (133)
T ss_dssp CCCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEE
T ss_pred ccccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECC
Confidence 4567888999999999999999998875 899999999999999999999999999999999999876678999999999
Q ss_pred CCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCceEEEEE
Q 025708 163 TFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESGELELEL 242 (249)
Q Consensus 163 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~l~l 242 (249)
.+++|++||++.++|.++..+ ...||++.... ......|+|+|++
T Consensus 84 ~~~~~~~lG~~~i~l~~l~~~--------------~~~w~~L~~~~---------------------~~~~~~G~i~l~i 128 (133)
T 2ep6_A 84 GDKPPDFLGKVAIPLLSIRDG--------------QPNCYVLKNKD---------------------LEQAFKGVIYLEM 128 (133)
T ss_dssp TTEEEEECCBCEEEGGGCCSS--------------CCEECCCBCSC---------------------TTSCCSSEEEEEE
T ss_pred CCCCCCeeEEEEEEHHHccCC--------------CceEEEeecCC---------------------CCCccceEEEEEE
Confidence 998999999999999998421 13788865431 1234679999999
Q ss_pred EEEe
Q 025708 243 EWMP 246 (249)
Q Consensus 243 ~~~~ 246 (249)
+|+.
T Consensus 129 ~~~~ 132 (133)
T 2ep6_A 129 DLIY 132 (133)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9864
No 2
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.91 E-value=2.4e-23 Score=157.59 Aligned_cols=127 Identities=26% Similarity=0.412 Sum_probs=109.0
Q ss_pred ccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECCeEEeeeeec-CcCCceeeeeEEEEeeCCCccEEEEEEecCCC
Q 025708 87 GMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQQTVQTTIVK-SNLNPVWNEELMLSVPQEYGPVKLEVFDHDTF 164 (249)
Q Consensus 87 ~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~kT~~~~-~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~~~ 164 (249)
+.....|.|+|+|++|++|+..+.. .+||||+++++.++++|++++ ++.||.|||+|.|.+......|.|+|||++.+
T Consensus 4 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 4 GSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 3456789999999999999998865 899999999999999999998 89999999999999988678999999999999
Q ss_pred CCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCceEEEEEEE
Q 025708 165 SADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESGELELELEW 244 (249)
Q Consensus 165 ~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~l~l~~ 244 (249)
++|++||++.|+|.++.... .....||++. ......|+|+|+++|
T Consensus 84 ~~d~~lG~~~i~l~~l~~~~-----------~~~~~w~~L~------------------------~~~~~~G~i~l~l~~ 128 (136)
T 1wfj_A 84 TEDDAVGEATIPLEPVFVEG-----------SIPPTAYNVV------------------------KDEEYKGEIWVALSF 128 (136)
T ss_dssp TTTCCSEEEEEESHHHHHHS-----------EEEEEEEEEE------------------------ETTEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEHHHhccCC-----------CCCcEEEEee------------------------cCCccCEEEEEEEEE
Confidence 99999999999999995432 3456788721 133457999999999
Q ss_pred EeCC
Q 025708 245 MPLD 248 (249)
Q Consensus 245 ~~~~ 248 (249)
.|..
T Consensus 129 ~p~~ 132 (136)
T 1wfj_A 129 KPSG 132 (136)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9864
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.91 E-value=3.5e-23 Score=160.26 Aligned_cols=122 Identities=23% Similarity=0.435 Sum_probs=101.9
Q ss_pred ccceeeeEEEEEEEEeecCCCCCC-----------CCCCcEEEEEECCeE-EeeeeecCcCCceeeeeEEEEeeCCCccE
Q 025708 87 GMVEFIGLLKVKVVKGINLAIRDM-----------MSSDPYVVLRLGQQT-VQTTIVKSNLNPVWNEELMLSVPQEYGPV 154 (249)
Q Consensus 87 ~~~~~~g~L~V~v~~a~~L~~~~~-----------~~~dpyv~v~l~~~~-~kT~~~~~t~~P~W~e~f~f~v~~~~~~L 154 (249)
++....|.|+|+|++|++|+++|. +.+||||++.++.++ .+|+++++|+||.|||+|.|.+... ..|
T Consensus 23 ~~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~-~~L 101 (157)
T 2fk9_A 23 GTMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG-GHL 101 (157)
T ss_dssp -CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEE
T ss_pred hhccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC-CEE
Confidence 456788999999999999998872 358999999998866 6999999999999999999998763 689
Q ss_pred EEEEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEecccc
Q 025708 155 KLEVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVE 234 (249)
Q Consensus 155 ~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~ 234 (249)
.|+|||++.+++|++||++.|+|.++..+.+ .+...+.||+ |+ +
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~--------~~~~~~~W~~--------------------------L~--~ 145 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTG--------ASDTFEGWVD--------------------------LE--P 145 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHT--------TCSEEEEEEE--------------------------CB--S
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccC--------CCCcccEEEE--------------------------CC--C
Confidence 9999999999999999999999999975421 1235677776 43 3
Q ss_pred CceEEEEEEEE
Q 025708 235 SGELELELEWM 245 (249)
Q Consensus 235 ~G~i~l~l~~~ 245 (249)
+|+|+|+++|.
T Consensus 146 ~G~i~l~l~~~ 156 (157)
T 2fk9_A 146 EGKVFVVITLT 156 (157)
T ss_dssp SCEEEEEEEEC
T ss_pred CcEEEEEEEEE
Confidence 79999999883
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.91 E-value=6e-23 Score=156.19 Aligned_cols=125 Identities=22% Similarity=0.321 Sum_probs=103.5
Q ss_pred eeeeEEEEEEEEeecCCCCCCCCCCcEEEEEECCeEEeeeeecCcCCceeeeeEEEEeeC----CCccEEEEEEecCCCC
Q 025708 90 EFIGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELMLSVPQ----EYGPVKLEVFDHDTFS 165 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~~~kT~~~~~t~~P~W~e~f~f~v~~----~~~~L~i~V~d~~~~~ 165 (249)
...|.|.|+|++|++|+..+.+.+||||+++++.++++|++++++.||+|||+|.|.+.. ....|.|+|||++.++
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 457899999999999998877778999999999999999999999999999999999864 3578999999999999
Q ss_pred CCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEe---cCCCccccCCceeeeCCeEEEEEEEEeccccCceEEEEE
Q 025708 166 ADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLK---SDDNALLEDSTINIIDGKVKQKISLKLQNVESGELELEL 242 (249)
Q Consensus 166 ~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~---~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~l~l 242 (249)
+|++||++.++|.++.. +.....|++ +.+. . .....|+|+|++
T Consensus 84 ~~~~lG~~~i~l~~l~~------------~~~~~~w~~l~~l~~~-----------~-----------~~~~~G~l~l~~ 129 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTG------------DQSRSLPYKLISLLNE-----------K-----------GQDTGATIDLVI 129 (140)
T ss_dssp SCCCCEEEEEEGGGTCS------------SSCEEEEEEEEEEECT-----------T-----------CCEEEEEEEEEE
T ss_pred CCceEEEEEEEHHHhcc------------CCCceeEEeeeeccCC-----------C-----------CCCCCCEEEEEE
Confidence 99999999999999843 234567875 2111 0 012349999999
Q ss_pred EEEeCC
Q 025708 243 EWMPLD 248 (249)
Q Consensus 243 ~~~~~~ 248 (249)
+|.|..
T Consensus 130 ~~~p~~ 135 (140)
T 2dmh_A 130 GYDPPS 135 (140)
T ss_dssp EECCCB
T ss_pred EEECCC
Confidence 998853
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.90 E-value=2.4e-22 Score=154.28 Aligned_cols=124 Identities=27% Similarity=0.520 Sum_probs=102.8
Q ss_pred ccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECCeEEeeeeecCcCCceeeeeEEEEeeCCCccEEEEEEecCCC-
Q 025708 87 GMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELMLSVPQEYGPVKLEVFDHDTF- 164 (249)
Q Consensus 87 ~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~kT~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~~~- 164 (249)
+...+.|.|.|+|++|++|+..+.. .+||||++.++.+.++|+++++++||.|||+|.|.+......|.|+|||++.+
T Consensus 11 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 11 GTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp ----CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 3455689999999999999998875 89999999999999999999999999999999999987668899999999986
Q ss_pred ----------CCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEecccc
Q 025708 165 ----------SADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVE 234 (249)
Q Consensus 165 ----------~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~ 234 (249)
+.|++||++.++|.++. ...+.||+|.... -....
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~--------------~~~~~w~~L~~~~---------------------~~~~~ 135 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLS--------------GEMDVWYNLDKRT---------------------DKSAV 135 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCC--------------SEEEEEEECBCSS---------------------TTCCC
T ss_pred cccccccccCCCCccEEEEEEEHHHCc--------------CCCCEEEEcccCC---------------------CCCCC
Confidence 78999999999999882 1357898865320 01235
Q ss_pred CceEEEEEEEE
Q 025708 235 SGELELELEWM 245 (249)
Q Consensus 235 ~G~i~l~l~~~ 245 (249)
.|+|+|+++|.
T Consensus 136 ~G~i~l~l~~e 146 (148)
T 3kwu_A 136 SGAIRLHISVE 146 (148)
T ss_dssp CCEEEEEEEEE
T ss_pred ceEEEEEEEEE
Confidence 69999998874
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.89 E-value=1.7e-22 Score=153.07 Aligned_cols=118 Identities=24% Similarity=0.490 Sum_probs=99.4
Q ss_pred eeeeEEEEEEEEeecCCCCCCC-C-----------CCcEEEEEECCeE-EeeeeecCcCCceeeeeEEEEeeCCCccEEE
Q 025708 90 EFIGLLKVKVVKGINLAIRDMM-S-----------SDPYVVLRLGQQT-VQTTIVKSNLNPVWNEELMLSVPQEYGPVKL 156 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~~~-~-----------~dpyv~v~l~~~~-~kT~~~~~t~~P~W~e~f~f~v~~~~~~L~i 156 (249)
...|.|+|+|++|++|++.+.. . +||||++.++... .+|+++++|+||.|||+|.|.+... ..|.|
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~ 81 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIEL 81 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEE
T ss_pred ccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEE
Confidence 4679999999999999987742 3 8999999998766 6999999999999999999998765 78999
Q ss_pred EEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCc
Q 025708 157 EVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESG 236 (249)
Q Consensus 157 ~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G 236 (249)
+|||++.+++|++||.+.++|.++.... ....+.|++ |+ ++|
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~----------~~~~~~w~~--------------------------L~--~~G 123 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNG----------SRHFEDWID--------------------------LE--PEG 123 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTT----------CSEEEEEEE--------------------------CB--SSC
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccC----------CCCccEEEE--------------------------cC--CCe
Confidence 9999999999999999999999985431 123466765 33 379
Q ss_pred eEEEEEEEEe
Q 025708 237 ELELELEWMP 246 (249)
Q Consensus 237 ~i~l~l~~~~ 246 (249)
+|+|+++|.+
T Consensus 124 ~i~l~l~~~~ 133 (136)
T 1gmi_A 124 KVYVIIDLSG 133 (136)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEe
Confidence 9999999875
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.89 E-value=1.7e-22 Score=156.06 Aligned_cols=131 Identities=31% Similarity=0.541 Sum_probs=101.3
Q ss_pred ceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC------eEEeeeeecCcCCceeeeeEEEEeeCCCccEEEEEEec
Q 025708 89 VEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ------QTVQTTIVKSNLNPVWNEELMLSVPQEYGPVKLEVFDH 161 (249)
Q Consensus 89 ~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~------~~~kT~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~d~ 161 (249)
....+.|+|+|++|++|+..+.. .+||||++++.. ..++|++++++.||.|||+|.|.+......|.|+|||+
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDE 95 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEEC
Confidence 34578999999999999998865 899999999963 56899999999999999999999987767899999999
Q ss_pred CCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCceEEEE
Q 025708 162 DTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESGELELE 241 (249)
Q Consensus 162 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~l~ 241 (249)
+.+++|++||++.|+|.++..+.... .......||+|.... -.....|+|+|+
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~------~~~~~~~w~~L~~~~---------------------~~~~~~G~i~l~ 148 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRL------ERPYTFKDFVLHPRS---------------------HKSRVKGYLRLK 148 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTS------CCCCCCEEEECBCSS---------------------TTCCCCSEEEEE
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcc------ccccccccccccccc---------------------CCCCcceEEEEE
Confidence 99999999999999999986543210 011235898864421 012357999999
Q ss_pred EEEEe
Q 025708 242 LEWMP 246 (249)
Q Consensus 242 l~~~~ 246 (249)
++|+|
T Consensus 149 l~~~P 153 (153)
T 3b7y_A 149 MTYLP 153 (153)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99987
No 8
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.89 E-value=3.4e-22 Score=157.56 Aligned_cols=132 Identities=20% Similarity=0.336 Sum_probs=102.9
Q ss_pred ceeeeEEEEEEEEeecCC-CCCCCCCCcEEEEEECCeEEeeeeecCcCCceeeeeEEEEeeCCCccEEEEEEecCCCCCC
Q 025708 89 VEFIGLLKVKVVKGINLA-IRDMMSSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELMLSVPQEYGPVKLEVFDHDTFSAD 167 (249)
Q Consensus 89 ~~~~g~L~V~v~~a~~L~-~~~~~~~dpyv~v~l~~~~~kT~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~~~~~d 167 (249)
....+.|.|+|++|++|+ ..+.+.+||||++.++.++++|+++++++||+|||+|.|.+.. ...|.|+|||++.+++|
T Consensus 32 ~~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~d 110 (173)
T 2nq3_A 32 LTMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSD 110 (173)
T ss_dssp CSCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCC
T ss_pred cCCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCC
Confidence 345788999999999999 5555579999999999989999999999999999999999864 67899999999999999
Q ss_pred CeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCceEEEEEEEEeC
Q 025708 168 DIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESGELELELEWMPL 247 (249)
Q Consensus 168 ~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~l~l~~~~~ 247 (249)
++||++.++|.++..+.... ...+..|++|... .-.....|+|+|.|.++++
T Consensus 111 d~lG~~~i~l~~l~~~~~~~-------~~~~~~~~~L~~~---------------------~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 111 VLLGTAALDIYETLKSNNMK-------LEEVVVTLQLGGD---------------------KEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEEHHHHHHHTTTE-------ESSEEEEEEEEES---------------------SCTTSEEEEEEEEEESEEC
T ss_pred ceEEEEEEEHHHhcccCCCC-------cceeEEEEECccC---------------------CCCCcccEEEEEEEeeeec
Confidence 99999999999997653211 1123456653221 0012246999999999988
Q ss_pred CC
Q 025708 248 DQ 249 (249)
Q Consensus 248 ~~ 249 (249)
++
T Consensus 163 ~~ 164 (173)
T 2nq3_A 163 ES 164 (173)
T ss_dssp C-
T ss_pred ch
Confidence 64
No 9
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.88 E-value=5.1e-22 Score=156.99 Aligned_cols=131 Identities=31% Similarity=0.535 Sum_probs=97.2
Q ss_pred eeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC------eEEeeeeecCcCCceeeeeEEEEeeCCCccEEEEEEecC
Q 025708 90 EFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ------QTVQTTIVKSNLNPVWNEELMLSVPQEYGPVKLEVFDHD 162 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~------~~~kT~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~ 162 (249)
...|.|.|+|++|++|+..+.. .+||||+++++. .+++|+++++++||.|||+|.|.+......|.|+|||++
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d 84 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDEN 84 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECC
Confidence 4579999999999999998875 899999999964 568999999999999999999999876678999999999
Q ss_pred CCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCceEEEEE
Q 025708 163 TFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESGELELEL 242 (249)
Q Consensus 163 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~l~l 242 (249)
.+++|++||++.|+|..+..+....+ ......||+|.... -.....|+|+|+|
T Consensus 85 ~~~~d~~lG~~~i~l~~l~~~~~~~~------~~~~~~w~~L~~~~---------------------~~~~~~G~l~l~l 137 (176)
T 3m7f_B 85 RLTRDDFLGQVDVPLYPLPTENPRME------RPYTFKDFVLHPRS---------------------HKSRVKGYLRLKM 137 (176)
T ss_dssp ----CEEEEEEEEESCSCCBC------------CCCCEEEECBCSS---------------------TTCCCCSEEEEEE
T ss_pred CCCCCcEEEEEEEEHHHccccCCccc------ccccccEEEccccC---------------------CCCccCEEEEEEE
Confidence 99999999999999999965432110 00122688865420 0223479999999
Q ss_pred EEEeC
Q 025708 243 EWMPL 247 (249)
Q Consensus 243 ~~~~~ 247 (249)
.|+|.
T Consensus 138 ~~~p~ 142 (176)
T 3m7f_B 138 TYLPK 142 (176)
T ss_dssp EECC-
T ss_pred EEEeC
Confidence 99874
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.88 E-value=3.8e-22 Score=148.97 Aligned_cols=89 Identities=22% Similarity=0.443 Sum_probs=79.1
Q ss_pred eeEEEEEEEEeecCCCC---CC-CCCCcEEEEEECC---eEEeeeeecCcCCceeeeeEEEEeeC-CCccEEEEEEecCC
Q 025708 92 IGLLKVKVVKGINLAIR---DM-MSSDPYVVLRLGQ---QTVQTTIVKSNLNPVWNEELMLSVPQ-EYGPVKLEVFDHDT 163 (249)
Q Consensus 92 ~g~L~V~v~~a~~L~~~---~~-~~~dpyv~v~l~~---~~~kT~~~~~t~~P~W~e~f~f~v~~-~~~~L~i~V~d~~~ 163 (249)
.|.|+|+|++|++|+.+ +. +.+||||++.+++ .+++|++++++.||+|||+|.|.+.. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 47899999999999985 33 3789999999975 67899999999999999999999964 56789999999998
Q ss_pred CCCCCeeEEEEEechhhh
Q 025708 164 FSADDIMGEAEIDIQPLL 181 (249)
Q Consensus 164 ~~~d~~iG~~~i~l~~l~ 181 (249)
+ +|++||++.++|.++.
T Consensus 82 ~-~~~~iG~~~i~l~~l~ 98 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMK 98 (126)
T ss_dssp S-CCEEEEEEEEEGGGSC
T ss_pred C-CCceeEEEEEEHHHcc
Confidence 7 4899999999999984
No 11
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.85 E-value=7.8e-21 Score=143.64 Aligned_cols=109 Identities=20% Similarity=0.314 Sum_probs=91.7
Q ss_pred cccceeeeEEEEEEEEeecCCCCCCCCCCcEEEEEE-----CCeEEeeeeecCcCCceeeeeEEEE-eeC---CCccEEE
Q 025708 86 VGMVEFIGLLKVKVVKGINLAIRDMMSSDPYVVLRL-----GQQTVQTTIVKSNLNPVWNEELMLS-VPQ---EYGPVKL 156 (249)
Q Consensus 86 ~~~~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l-----~~~~~kT~~~~~t~~P~W~e~f~f~-v~~---~~~~L~i 156 (249)
..+....+.|.|+|++|++|+....+.+||||++++ ...+++|+++++++||+|||+|.|. +.. ....|.|
T Consensus 13 ~~~~~~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~ 92 (134)
T 2b3r_A 13 LSVSYRNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQL 92 (134)
T ss_dssp EEEEEETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEE
T ss_pred EEEeecCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEE
Confidence 455667899999999999999733348999999999 3457899999999999999999999 754 3578999
Q ss_pred EEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 157 EVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 157 ~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
+|||++.++++++||++.++|.++.. +.....||+|..
T Consensus 93 ~V~d~d~~~~~~~lG~~~i~l~~l~~------------~~~~~~W~~L~~ 130 (134)
T 2b3r_A 93 SVLSAESLRENFFLGGITLPLKDFNL------------SKETVKWYQLTA 130 (134)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGSCT------------TSCEEEEEECBC
T ss_pred EEEECCCCCCCcEEEEEEEEhhhccC------------CCCcceeEECCC
Confidence 99999999999999999999999843 235678998654
No 12
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.85 E-value=1.4e-20 Score=145.43 Aligned_cols=116 Identities=18% Similarity=0.324 Sum_probs=96.8
Q ss_pred CccccccceeeeEEEEEEEEeecCCCCCCCCCCcEEEEEEC-----CeEEeeeeecCcCCceeeeeEEEEeeC--CCccE
Q 025708 82 QKKDVGMVEFIGLLKVKVVKGINLAIRDMMSSDPYVVLRLG-----QQTVQTTIVKSNLNPVWNEELMLSVPQ--EYGPV 154 (249)
Q Consensus 82 ~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~-----~~~~kT~~~~~t~~P~W~e~f~f~v~~--~~~~L 154 (249)
...++.|....+.|.|+|++|++|+..+.+.+||||++.+. ..+++|+++++++||.|||+|.|.+.. ....|
T Consensus 16 ~~lsL~y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L 95 (153)
T 3fbk_A 16 GQLRLSIDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRL 95 (153)
T ss_dssp CEEEEEEEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEE
T ss_pred EEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEE
Confidence 34457788889999999999999999985589999999993 356899999999999999999999843 44569
Q ss_pred EEEEEecCCCCC-CCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCc
Q 025708 155 KLEVFDHDTFSA-DDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNA 208 (249)
Q Consensus 155 ~i~V~d~~~~~~-d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 208 (249)
.|+|||++.+++ |++||++.++|.++.. .+.....||+|....
T Consensus 96 ~i~V~d~d~~~~~d~~lG~~~i~l~~l~~-----------~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 96 LVTVWNRASQSRQSGLIGCMSFGVKSLLT-----------PDKEISGWYYLLGEH 139 (153)
T ss_dssp EEEEEECCSSGGGCEEEEEEEEEHHHHTC-------------CCEEEEEECBCTT
T ss_pred EEEEEeCCCCCCCCcEEEEEEEEHHHhcC-----------CCCccccEEECCChh
Confidence 999999999877 8999999999999843 134577899976653
No 13
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.84 E-value=7.7e-20 Score=137.60 Aligned_cols=91 Identities=22% Similarity=0.400 Sum_probs=81.2
Q ss_pred eeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC--eEEeeeeecCcCCceeeeeEEEEeeCCCccEEEEEEecCCCCC--
Q 025708 92 IGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ--QTVQTTIVKSNLNPVWNEELMLSVPQEYGPVKLEVFDHDTFSA-- 166 (249)
Q Consensus 92 ~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~--~~~kT~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~~~~~-- 166 (249)
...|+|+|++|++|+..+.. .+||||++.++. +.++|+++++++||.|||+|.|.+... ..|.|+|||++.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~l~~~v~d~d~~~~~~ 82 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT-DSITISVWNHKKIHKKQ 82 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT-CCEEEEEEEGGGTTSST
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC-CEEEEEEEECCCCCCCC
Confidence 46799999999999998876 899999999964 779999999999999999999999875 459999999999876
Q ss_pred -CCeeEEEEEechhhhhh
Q 025708 167 -DDIMGEAEIDIQPLLTS 183 (249)
Q Consensus 167 -d~~iG~~~i~l~~l~~~ 183 (249)
|++||++.+++..+...
T Consensus 83 ~d~~lG~~~i~l~~l~~~ 100 (132)
T 3pyc_A 83 GAGFLGCVRLLSNAISRL 100 (132)
T ss_dssp TTTEEEEEEECHHHHHHH
T ss_pred CCCceEEEEEeHHHhhcc
Confidence 89999999999988443
No 14
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.84 E-value=1.4e-20 Score=145.14 Aligned_cols=110 Identities=27% Similarity=0.434 Sum_probs=94.0
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEE---CCeEEeeeeecCcCCceeeeeEEEEeeC---CCccEEEE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRL---GQQTVQTTIVKSNLNPVWNEELMLSVPQ---EYGPVKLE 157 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l---~~~~~kT~~~~~t~~P~W~e~f~f~v~~---~~~~L~i~ 157 (249)
++.|....+.|+|+|++|++|+..+.. .+||||++++ +...++|++++++.||+|||+|.|.+.. ....|.|+
T Consensus 34 ~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 113 (152)
T 1rsy_A 34 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMA 113 (152)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEE
T ss_pred EEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEE
Confidence 345556679999999999999998875 8999999999 3457899999999999999999999864 35789999
Q ss_pred EEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 158 VFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 158 V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
|||++.+++|++||++.++|.++. .+.....||+|..
T Consensus 114 V~d~d~~~~~~~iG~~~i~l~~l~------------~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 114 VYDFDRFSKHDIIGEFKVPMNTVD------------FGHVTEEWRDLQS 150 (152)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGCC------------CSSCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEchhcc------------CCCCcceEEECCC
Confidence 999999999999999999999983 2335789998644
No 15
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.84 E-value=9.5e-21 Score=147.16 Aligned_cols=121 Identities=29% Similarity=0.370 Sum_probs=97.2
Q ss_pred cccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC-----eEEeeeeecCcCCceeeeeEEEEeeCC---CccEEE
Q 025708 86 VGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ-----QTVQTTIVKSNLNPVWNEELMLSVPQE---YGPVKL 156 (249)
Q Consensus 86 ~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~-----~~~kT~~~~~t~~P~W~e~f~f~v~~~---~~~L~i 156 (249)
+.|....+.|.|+|++|++|+..+.. .+||||++++.. .+++|+++++++||.|||+|.|.+... ...|.|
T Consensus 18 l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 97 (159)
T 1tjx_A 18 LRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 97 (159)
T ss_dssp EEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred EEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEE
Confidence 45666789999999999999998875 899999999952 468999999999999999999998653 357999
Q ss_pred EEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 157 EVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 157 ~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
+|||++.+++|++||.+.|+|..+..+.+++.......+..+..|++|..
T Consensus 98 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 98 TVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred EEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 99999999999999999999997644433322111134567789998654
No 16
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.84 E-value=3.8e-21 Score=145.61 Aligned_cols=120 Identities=24% Similarity=0.378 Sum_probs=98.6
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC-----eEEeeeeecCcCCceeeeeEEEEeeCCC---ccEE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ-----QTVQTTIVKSNLNPVWNEELMLSVPQEY---GPVK 155 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~-----~~~kT~~~~~t~~P~W~e~f~f~v~~~~---~~L~ 155 (249)
++.|....+.|.|+|++|++|+..+.. .+||||++++.. .+++|++++++.||.|||+|.|.+.... ..|.
T Consensus 8 sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~ 87 (138)
T 3n5a_A 8 SLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTII 87 (138)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEE
T ss_pred EEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEE
Confidence 345666779999999999999998876 899999999953 4689999999999999999999987632 5799
Q ss_pred EEEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEec
Q 025708 156 LEVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKS 204 (249)
Q Consensus 156 i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~ 204 (249)
|+|||++.+++|++||++.++|.++..+..++.......+..+..|++|
T Consensus 88 ~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L 136 (138)
T 3n5a_A 88 ITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQL 136 (138)
T ss_dssp EEEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCEEEEEEC
T ss_pred EEEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeEEEEeec
Confidence 9999999999999999999999987655544332223456678888874
No 17
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.84 E-value=7.7e-21 Score=146.11 Aligned_cols=103 Identities=31% Similarity=0.451 Sum_probs=89.1
Q ss_pred eeeEEEEEEEEeecCCCCCCC-CCCcEEEEEEC-----CeEEeeeeecCcCCceeeeeEEEEeeCC--CccEEEEEEecC
Q 025708 91 FIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLG-----QQTVQTTIVKSNLNPVWNEELMLSVPQE--YGPVKLEVFDHD 162 (249)
Q Consensus 91 ~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~-----~~~~kT~~~~~t~~P~W~e~f~f~v~~~--~~~L~i~V~d~~ 162 (249)
..+.|+|+|++|++|+..+.. .+||||++++. ..+++|++++++.||.|||+|.|.+... ...|.|+|||++
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 358899999999999998875 89999999996 3578999999999999999999998762 357999999999
Q ss_pred CCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 163 TFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 163 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
.+++|++||++.|+|.++..+ ....||+|..
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~~-------------~~~~W~~L~~ 139 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQKA-------------GVDGWFKLLS 139 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTTC-------------CEEEEEECBC
T ss_pred CCCCCCEEEEEEEEHHHhCcC-------------ccCCeEEccC
Confidence 999999999999999998432 3678988544
No 18
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.84 E-value=1.3e-20 Score=143.76 Aligned_cols=110 Identities=27% Similarity=0.436 Sum_probs=94.5
Q ss_pred cccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEE---CCeEEeeeeecCcCCceeeeeEEEEeeC---CCccEEE
Q 025708 84 KDVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRL---GQQTVQTTIVKSNLNPVWNEELMLSVPQ---EYGPVKL 156 (249)
Q Consensus 84 ~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l---~~~~~kT~~~~~t~~P~W~e~f~f~v~~---~~~~L~i 156 (249)
.++.+....+.|.|+|++|++|+..+.. .+||||++.+ +..+++|++++++.||.|||+|.|.+.. ....|.|
T Consensus 25 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 104 (143)
T 3f04_A 25 YSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 104 (143)
T ss_dssp EEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred EEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEE
Confidence 3456666789999999999999998875 8999999999 4567999999999999999999999864 3478999
Q ss_pred EEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecC
Q 025708 157 EVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSD 205 (249)
Q Consensus 157 ~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~ 205 (249)
+|||++.+++|++||++.++|.++.. +.....|++|.
T Consensus 105 ~V~d~d~~~~~~~iG~~~i~l~~l~~------------~~~~~~W~~L~ 141 (143)
T 3f04_A 105 AVYDFDRFSKHDIIGEFKVPMNTVDF------------GHVTEEWRDLQ 141 (143)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGCCT------------TSCEEEEEECB
T ss_pred EEEeCCCCCCCceEEEEEEEHHHccC------------CCCcceEEECc
Confidence 99999999999999999999999833 34567898854
No 19
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=4.5e-21 Score=148.50 Aligned_cols=109 Identities=13% Similarity=0.166 Sum_probs=92.8
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC------eEEeeeeecCcCCceeeeeEEEEeeC---CCccE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ------QTVQTTIVKSNLNPVWNEELMLSVPQ---EYGPV 154 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~------~~~kT~~~~~t~~P~W~e~f~f~v~~---~~~~L 154 (249)
++.|....+.|+|.|++|++|++++.. .+||||++++.. .+++|+++++|+||+|||+|.|.+.. ....|
T Consensus 35 sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L 114 (155)
T 2z0u_A 35 ALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTL 114 (155)
T ss_dssp EEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEE
T ss_pred EEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEE
Confidence 355666779999999999999999875 899999999954 26899999999999999999999865 24689
Q ss_pred EEEEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEec
Q 025708 155 KLEVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKS 204 (249)
Q Consensus 155 ~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~ 204 (249)
.|+|||++.++++++||++.++|.++.. .+.....||++
T Consensus 115 ~~~V~d~d~~~~~d~iG~~~i~l~~l~~-----------~~~~~~~W~~L 153 (155)
T 2z0u_A 115 RVDVCTTDRSHLEECLGGAQISLAEVCR-----------SGERSTRWYNL 153 (155)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECTTSCT-----------TCCCEEEEEEE
T ss_pred EEEEEECCCCCCCcEEEEEEEEHHHccC-----------CCCccccceEc
Confidence 9999999999999999999999999831 12356789874
No 20
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.83 E-value=3.5e-20 Score=140.17 Aligned_cols=104 Identities=29% Similarity=0.467 Sum_probs=90.6
Q ss_pred eeeEEEEEEEEeecCCCCCCC-CCCcEEEEEE-----CCeEEeeeeecCcCCceeeeeEEEEeeC--CCccEEEEEEecC
Q 025708 91 FIGLLKVKVVKGINLAIRDMM-SSDPYVVLRL-----GQQTVQTTIVKSNLNPVWNEELMLSVPQ--EYGPVKLEVFDHD 162 (249)
Q Consensus 91 ~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~kT~~~~~t~~P~W~e~f~f~v~~--~~~~L~i~V~d~~ 162 (249)
..+.|.|+|++|++|+..+.. .+||||++.+ +...++|++++++.||.|||+|.|.+.. ....|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 569999999999999998876 8999999999 4567999999999999999999999865 2357999999999
Q ss_pred CCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCC
Q 025708 163 TFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDN 207 (249)
Q Consensus 163 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~ 207 (249)
.+++|++||++.++|.++..+ ....||++.+.
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~-------------~~~~W~~L~~~ 125 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKM-------------PASGWYKLLNQ 125 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHS-------------CEEEEEECBCH
T ss_pred CCCCCceEEEEEEeHHHhccC-------------ccCceEECcCc
Confidence 999999999999999999543 26789986553
No 21
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.83 E-value=1.4e-20 Score=145.20 Aligned_cols=122 Identities=25% Similarity=0.328 Sum_probs=92.3
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEE--CCe---EEeeeeecCcCCceeeeeEEEEeeCC---CccEE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRL--GQQ---TVQTTIVKSNLNPVWNEELMLSVPQE---YGPVK 155 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l--~~~---~~kT~~~~~t~~P~W~e~f~f~v~~~---~~~L~ 155 (249)
++.+....+.|.|+|++|++|+..+.. .+||||++++ +.. +++|+++++++||+|||+|.|.+... ...|.
T Consensus 22 ~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~ 101 (153)
T 1w15_A 22 SLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVE 101 (153)
T ss_dssp EEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEE
T ss_pred EEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEE
Confidence 355666789999999999999998865 8899999999 333 57999999999999999999998763 36799
Q ss_pred EEEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 156 LEVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 156 i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
|+|||++.++++++||++.|+|.+...+..++.......+..+..|.+|.+
T Consensus 102 v~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~~~~Wh~L~~ 152 (153)
T 1w15_A 102 FLVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQIAKWHMLCD 152 (153)
T ss_dssp EEEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred EEEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCeeeecccccc
Confidence 999999999999999999999988433322221111234667788877543
No 22
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=4.3e-20 Score=140.58 Aligned_cols=109 Identities=29% Similarity=0.446 Sum_probs=92.5
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEEC---CeEEeeeeecCcCCceeeeeEEEEeeC----CCccEEE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLG---QQTVQTTIVKSNLNPVWNEELMLSVPQ----EYGPVKL 156 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~---~~~~kT~~~~~t~~P~W~e~f~f~v~~----~~~~L~i 156 (249)
++.|....+.|+|+|++|++|+..+.. .+||||++++. ...++|++++++.||+|||+|.|.+.. ....|.|
T Consensus 18 ~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i 97 (141)
T 2d8k_A 18 SVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYL 97 (141)
T ss_dssp EEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEE
T ss_pred EEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEE
Confidence 355666789999999999999998875 89999999993 457899999999999999999998532 3578999
Q ss_pred EEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecC
Q 025708 157 EVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSD 205 (249)
Q Consensus 157 ~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~ 205 (249)
+|||++.++++++||++.++|.++..+ .....||+|.
T Consensus 98 ~V~d~d~~~~~~~iG~~~i~l~~l~~~------------~~~~~W~~L~ 134 (141)
T 2d8k_A 98 QVLDYDRFSRNDPIGEVSIPLNKVDLT------------QMQTFWKDLK 134 (141)
T ss_dssp EEEECCSSSSCEEEEEEEEETTTSCTT------------SCEEEEECCE
T ss_pred EEEECCCCCCCcEEEEEEEEhhhhcCC------------CCccEEEECc
Confidence 999999999999999999999998432 3467898753
No 23
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.83 E-value=1.6e-20 Score=146.96 Aligned_cols=122 Identities=24% Similarity=0.340 Sum_probs=98.2
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC-----eEEeeeeecCcCCceeeeeEEEEeeC---CCccEE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ-----QTVQTTIVKSNLNPVWNEELMLSVPQ---EYGPVK 155 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~-----~~~kT~~~~~t~~P~W~e~f~f~v~~---~~~~L~ 155 (249)
++.+....+.|.|+|++|++|+..+.. .+||||++++.. ..++|+++++++||+|||+|.|.+.. ....|.
T Consensus 29 ~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 108 (166)
T 2cm5_A 29 SLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLD 108 (166)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEE
T ss_pred EEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEE
Confidence 355666789999999999999998876 899999999964 57899999999999999999999865 245899
Q ss_pred EEEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 156 LEVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 156 i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
|+|||++.++++++||.+.|+|.++..+..++-......+..+..|++|..
T Consensus 109 i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 109 ISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQN 159 (166)
T ss_dssp EEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC
T ss_pred EEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCC
Confidence 999999999999999999999998754433221111234566778887544
No 24
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=3.2e-20 Score=138.99 Aligned_cols=106 Identities=21% Similarity=0.385 Sum_probs=85.8
Q ss_pred cccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEE-----CCeEEeeeeecCcCCceeeeeEEEEeeC----CCccEE
Q 025708 86 VGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRL-----GQQTVQTTIVKSNLNPVWNEELMLSVPQ----EYGPVK 155 (249)
Q Consensus 86 ~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~kT~~~~~t~~P~W~e~f~f~v~~----~~~~L~ 155 (249)
+.+....+.|.|+|++|++|+..+.. .+||||++++ +..+++|++++++.||.|||+|.|.+.. ....|.
T Consensus 11 l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 90 (129)
T 2bwq_A 11 LWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 90 (129)
T ss_dssp EEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred EEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEE
Confidence 45666679999999999999998876 7899999999 3567999999999999999999999532 346899
Q ss_pred EEEEecCCCCC--CCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEec
Q 025708 156 LEVFDHDTFSA--DDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKS 204 (249)
Q Consensus 156 i~V~d~~~~~~--d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~ 204 (249)
|+|||++.+++ +++||++.++|.++... ....||+|
T Consensus 91 ~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~-------------~~~~W~~L 128 (129)
T 2bwq_A 91 ITLWDQARVREEESEFLGEILIELETALLD-------------DEPHWYKL 128 (129)
T ss_dssp EEEEEC-------CEEEEEEEEEGGGCCCS-------------SCEEEEEC
T ss_pred EEEEECCcCcCcCCceeEEEEEEccccCCC-------------cCCccEEC
Confidence 99999999887 99999999999998432 16789874
No 25
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.82 E-value=2.3e-20 Score=143.27 Aligned_cols=111 Identities=25% Similarity=0.402 Sum_probs=93.9
Q ss_pred ccccceeeeEEEEEEEEeecCCCCC-CC-CCCcEEEEEEC-----CeEEeeeeecCcCCceeeeeEEEEeeCC---CccE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRD-MM-SSDPYVVLRLG-----QQTVQTTIVKSNLNPVWNEELMLSVPQE---YGPV 154 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~-~~-~~dpyv~v~l~-----~~~~kT~~~~~t~~P~W~e~f~f~v~~~---~~~L 154 (249)
++.+....+.|.|+|++|++|+..+ .. .+||||++.+. ..+++|+++++++||+|||+|.|.+... ...|
T Consensus 15 sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L 94 (148)
T 3fdw_A 15 SLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTL 94 (148)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEE
T ss_pred EEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEE
Confidence 3556667899999999999999887 33 89999999995 2478999999999999999999998763 3469
Q ss_pred EEEEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCC
Q 025708 155 KLEVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDN 207 (249)
Q Consensus 155 ~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~ 207 (249)
.|+|||++.+++|++||++.++|.++..+. ....||+|...
T Consensus 95 ~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~------------~~~~W~~L~~~ 135 (148)
T 3fdw_A 95 QFSVWHHGRFGRNTFLGEAEIQMDSWKLDK------------KLDHCLPLHGK 135 (148)
T ss_dssp EEEEEEECGGGCEEEEEEEEEEHHHHHHHC------------CSEEEEECBCC
T ss_pred EEEEEECCCCcCCcEEEEEEEEcccccccC------------CccceEECcCc
Confidence 999999999999999999999999995442 35689997654
No 26
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.82 E-value=6.6e-20 Score=144.21 Aligned_cols=105 Identities=22% Similarity=0.327 Sum_probs=91.7
Q ss_pred eeeEEEEEEEEeecCCCCCC--CCCCcEEEEEECC-----eEEeeeeecCcCCceeeeeEEEEeeCCCccEEEEEE-ecC
Q 025708 91 FIGLLKVKVVKGINLAIRDM--MSSDPYVVLRLGQ-----QTVQTTIVKSNLNPVWNEELMLSVPQEYGPVKLEVF-DHD 162 (249)
Q Consensus 91 ~~g~L~V~v~~a~~L~~~~~--~~~dpyv~v~l~~-----~~~kT~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~-d~~ 162 (249)
..+.|.|+|++|++|+.++. +.+||||++++.. .+++|+++++++||+|||+|.|.+......|.|+|| |++
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 57999999999999999884 4899999999853 368999999999999999999999776788999999 999
Q ss_pred CCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCC
Q 025708 163 TFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDN 207 (249)
Q Consensus 163 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~ 207 (249)
.+++|++||++.|+|.++.. +.....||+|...
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~------------~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDL------------SSMVIGWYKLFPP 140 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCT------------TSCEEEEEECBCG
T ss_pred CCCCCCEEEEEEEEHHHccc------------CCCcceeEECCCc
Confidence 99999999999999999842 2357899998665
No 27
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.81 E-value=1.3e-19 Score=138.06 Aligned_cols=98 Identities=26% Similarity=0.455 Sum_probs=85.9
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC-----eEEeeeeecCcCCceeeeeEEEE-eeCC---CccE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ-----QTVQTTIVKSNLNPVWNEELMLS-VPQE---YGPV 154 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~-----~~~kT~~~~~t~~P~W~e~f~f~-v~~~---~~~L 154 (249)
++.|....+.|.|+|++|++|+..+.. .+||||++++.. ..++|++++++.||.|||+|.|. +... ...|
T Consensus 21 ~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l 100 (142)
T 2chd_A 21 SLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTL 100 (142)
T ss_dssp EEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEE
T ss_pred EEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEE
Confidence 355666789999999999999999875 899999999964 67899999999999999999998 5432 3689
Q ss_pred EEEEEecCCCCCCCeeEEEEEechhhhh
Q 025708 155 KLEVFDHDTFSADDIMGEAEIDIQPLLT 182 (249)
Q Consensus 155 ~i~V~d~~~~~~d~~iG~~~i~l~~l~~ 182 (249)
.|+|||++.+++|++||++.++|.++..
T Consensus 101 ~i~V~d~d~~~~d~~iG~~~i~l~~l~~ 128 (142)
T 2chd_A 101 RISVCDEDKFGHNEFIGETRFSLKKLKA 128 (142)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEGGGCCT
T ss_pred EEEEEECCCCCCCcEEEEEEEEHHHcCC
Confidence 9999999999999999999999999843
No 28
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=2.3e-19 Score=136.16 Aligned_cols=106 Identities=20% Similarity=0.299 Sum_probs=87.4
Q ss_pred cccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEEC---C-eEEeeeeecCcCCceeeeeEEEEeeCC---CccEEEE
Q 025708 86 VGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLG---Q-QTVQTTIVKSNLNPVWNEELMLSVPQE---YGPVKLE 157 (249)
Q Consensus 86 ~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~---~-~~~kT~~~~~t~~P~W~e~f~f~v~~~---~~~L~i~ 157 (249)
+.|....+.|+|+|++|++ ++.. .+||||++.+. . ..++|+++++++||+|||+|.|.+... ...|.|+
T Consensus 19 l~y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~ 95 (138)
T 1wfm_A 19 LDYDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLT 95 (138)
T ss_dssp EEEETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEE
T ss_pred EEEeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEE
Confidence 4566667999999999993 4444 89999999993 2 358999999999999999999998752 4679999
Q ss_pred EEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 158 VFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 158 V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
|||++.+++|++||++.++|.++.. +.....|+++..
T Consensus 96 V~d~d~~~~dd~lG~~~i~l~~l~~------------~~~~~~W~~L~~ 132 (138)
T 1wfm_A 96 LRTCDRFSRHSVAGELRLGLDGTSV------------PLGAAQWGELKT 132 (138)
T ss_dssp EEECCSSCTTSCSEEEEEESSSSSS------------CTTCCEEEECCC
T ss_pred EEECCCCCCCcEEEEEEEEcccccC------------cccccceeeCcC
Confidence 9999999999999999999999832 224578988654
No 29
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=2.8e-20 Score=141.70 Aligned_cols=103 Identities=28% Similarity=0.497 Sum_probs=88.3
Q ss_pred eeEEEEEEEEeecCCCCCCC-CCCcEEEEEECCe--------------EEeeeeecCcCCceeeeeEEEE-eeC---CCc
Q 025708 92 IGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQQ--------------TVQTTIVKSNLNPVWNEELMLS-VPQ---EYG 152 (249)
Q Consensus 92 ~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~--------------~~kT~~~~~t~~P~W~e~f~f~-v~~---~~~ 152 (249)
.+.|.|+|++|++|+.++.. .+||||++++... +++|+++++++||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 68999999999999999875 8999999999652 4789999999999999999997 543 357
Q ss_pred cEEEEEEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 153 PVKLEVFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 153 ~L~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
.|.|+|||++.++++++||++.|+|.++... .....||+|..
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~------------~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHL------------DNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGG------------TTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccC------------CCCCeEEECCc
Confidence 8999999999999999999999999988543 23568998654
No 30
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=1.1e-19 Score=138.14 Aligned_cols=109 Identities=20% Similarity=0.383 Sum_probs=91.4
Q ss_pred cccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEE-----CCeEEeeeeecCcCCceeeeeEEEEe-eC---CCccEE
Q 025708 86 VGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRL-----GQQTVQTTIVKSNLNPVWNEELMLSV-PQ---EYGPVK 155 (249)
Q Consensus 86 ~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~kT~~~~~t~~P~W~e~f~f~v-~~---~~~~L~ 155 (249)
+.|....+.|.|+|++|++|+..+.. .+||||++++ +..+++|+++++++||+|||+|.|.+ .. ....|.
T Consensus 14 l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 93 (141)
T 1v27_A 14 LWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE 93 (141)
T ss_dssp EEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEE
T ss_pred EEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEE
Confidence 45555679999999999999998876 8999999999 34678999999999999999999995 32 347899
Q ss_pred EEEEecCCCCC--CCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCC
Q 025708 156 LEVFDHDTFSA--DDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDN 207 (249)
Q Consensus 156 i~V~d~~~~~~--d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~ 207 (249)
|+|||++.+++ +++||++.|+|.++... ....||+|...
T Consensus 94 i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~-------------~~~~W~~L~~~ 134 (141)
T 1v27_A 94 ITLWDQARVREEESEFLGEILIELETALLD-------------DEPHWYKLQTH 134 (141)
T ss_dssp EEEEEBCSSSSCCBCCCEEEEEEGGGCCCS-------------SEEEEEECBCC
T ss_pred EEEEECCCCcCCCCceEEEEEEEccccCCC-------------CCCceEECccc
Confidence 99999999887 89999999999998421 16789986553
No 31
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=2.6e-19 Score=135.76 Aligned_cols=98 Identities=23% Similarity=0.422 Sum_probs=85.7
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCC--CCCCcEEEEEEC---CeEEeeeeecCcCCceeeeeEEEE-eeC---CCccEE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDM--MSSDPYVVLRLG---QQTVQTTIVKSNLNPVWNEELMLS-VPQ---EYGPVK 155 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~--~~~dpyv~v~l~---~~~~kT~~~~~t~~P~W~e~f~f~-v~~---~~~~L~ 155 (249)
++.+....+.|.|+|++|++|+.++. +.+||||++++. ...++|+++++++||+|||+|.|. +.. ....|.
T Consensus 14 ~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~ 93 (138)
T 1ugk_A 14 SLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALH 93 (138)
T ss_dssp EEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEE
T ss_pred EEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEE
Confidence 35566678999999999999999886 379999999995 367999999999999999999996 654 235899
Q ss_pred EEEEecCCCCCCCeeEEEEEechhhhh
Q 025708 156 LEVFDHDTFSADDIMGEAEIDIQPLLT 182 (249)
Q Consensus 156 i~V~d~~~~~~d~~iG~~~i~l~~l~~ 182 (249)
|+|||++.+++|++||++.++|.++..
T Consensus 94 i~V~d~d~~~~~~~lG~~~i~l~~l~~ 120 (138)
T 1ugk_A 94 FTILSFDRFSRDDIIGEVLIPLSGIEL 120 (138)
T ss_dssp EEEEEECSSCCCCCCEEEEEECTTCCC
T ss_pred EEEEECCCCCCCcEEEEEEEehhHccC
Confidence 999999999999999999999999843
No 32
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.80 E-value=1.5e-18 Score=158.37 Aligned_cols=123 Identities=28% Similarity=0.460 Sum_probs=103.7
Q ss_pred eeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECCeEEeeeeecCcCCceeeeeEEEEeeC-CCccEEEEEEecCCCCCC
Q 025708 90 EFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELMLSVPQ-EYGPVKLEVFDHDTFSAD 167 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~kT~~~~~t~~P~W~e~f~f~v~~-~~~~L~i~V~d~~~~~~d 167 (249)
...|.|.|+|++|++|+..+.. .+||||++.++..+++|+++++++||.|||+|.|.+.. ....|.|+|||+|.+++|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 3468999999999999998875 89999999999999999999999999999999999876 446799999999999999
Q ss_pred CeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCceEEEEEEEEe
Q 025708 168 DIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESGELELELEWMP 246 (249)
Q Consensus 168 ~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~l~l~~~~ 246 (249)
++||++.++|.++..+....+ .+..|++ +.+..+|+|+|+++..-
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~--------~~~~~~~--------------------------l~~~~~G~i~l~~~l~l 508 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKG--------PMTRRLL--------------------------LHEVPTGEVWVRFDLQL 508 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHC--------SCCEEEE--------------------------CBSSSSCEEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCC--------ceeeeec--------------------------CCCCCCceEEEEEEEEE
Confidence 999999999999977653321 3456665 56667899998887643
No 33
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=9e-19 Score=148.20 Aligned_cols=110 Identities=27% Similarity=0.431 Sum_probs=94.4
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECC---eEEeeeeecCcCCceeeeeEEEEeeC---CCccEEEE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQ---QTVQTTIVKSNLNPVWNEELMLSVPQ---EYGPVKLE 157 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~---~~~kT~~~~~t~~P~W~e~f~f~v~~---~~~~L~i~ 157 (249)
++.|....+.|.|+|++|++|+..+.. .+||||++.++. ..++|+++++++||.|||+|.|.+.. ....|.|+
T Consensus 11 ~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~ 90 (284)
T 2r83_A 11 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMA 90 (284)
T ss_dssp EEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEE
T ss_pred EEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEE
Confidence 345666789999999999999998876 899999999953 46899999999999999999999865 24689999
Q ss_pred EEecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 158 VFDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 158 V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
|||++.+++|++||++.++|.++.. +.....|+++..
T Consensus 91 V~d~d~~~~~~~lG~~~i~l~~l~~------------~~~~~~w~~L~~ 127 (284)
T 2r83_A 91 VYDFDRFSKHDIIGEFKVPMNTVDF------------GHVTEEWRDLQS 127 (284)
T ss_dssp EEECCSSSCCCEEEEEEEEGGGCCC------------SSCEEEEEECBC
T ss_pred EEECCCCCCCceeEEEEEcchhccc------------CCcceeEEEeec
Confidence 9999999999999999999999843 335788998755
No 34
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=1.6e-19 Score=138.43 Aligned_cols=97 Identities=23% Similarity=0.363 Sum_probs=83.6
Q ss_pred ccccceeeeEEEEEEEEeecCCCC-CC-------CCCCcEEEEEEC---CeEEeeeeecCcCCceeeeeEEEEeeC---C
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIR-DM-------MSSDPYVVLRLG---QQTVQTTIVKSNLNPVWNEELMLSVPQ---E 150 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~-~~-------~~~dpyv~v~l~---~~~~kT~~~~~t~~P~W~e~f~f~v~~---~ 150 (249)
++.|....+.|.|+|++|++|+.. +. +.+||||++++. ..+++|++++++.||+|||+|.|.+.. .
T Consensus 18 ~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 97 (147)
T 2enp_A 18 STQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQ 97 (147)
T ss_dssp EEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHH
T ss_pred EEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhc
Confidence 355666789999999999999984 21 278999999995 356899999999999999999999865 2
Q ss_pred CccEEEEEEecCCCCCCCeeEEEEEechhhh
Q 025708 151 YGPVKLEVFDHDTFSADDIMGEAEIDIQPLL 181 (249)
Q Consensus 151 ~~~L~i~V~d~~~~~~d~~iG~~~i~l~~l~ 181 (249)
...|.|+|||++.++++++||++.|+|.++.
T Consensus 98 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~ 128 (147)
T 2enp_A 98 RRTLLLTVVDFDKFSRHCVIGKVSVPLCEVD 128 (147)
T ss_dssp HSEEEEEEECCSTTCCSCCCEEEEEETTTSC
T ss_pred cCEEEEEEEECCCCcCCcEEEEEEEechhcC
Confidence 3589999999999999999999999999984
No 35
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=1.8e-19 Score=137.20 Aligned_cols=109 Identities=21% Similarity=0.270 Sum_probs=89.6
Q ss_pred cccceeeeEEEEEEEEeecCCCCCCCCCCcEEEEEECC-----eEEeeeeecCcCCceeeeeEEEEeeC---CCccEEEE
Q 025708 86 VGMVEFIGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQ-----QTVQTTIVKSNLNPVWNEELMLSVPQ---EYGPVKLE 157 (249)
Q Consensus 86 ~~~~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~-----~~~kT~~~~~t~~P~W~e~f~f~v~~---~~~~L~i~ 157 (249)
+.+....+.|.|+|++|++|+.++...+||||++++.. .+++|+++++++||+|||+|.|.+.. ....|.|+
T Consensus 17 l~y~~~~~~L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 96 (142)
T 2dmg_A 17 IRHSSQRNKLIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVA 96 (142)
T ss_dssp EEEETTTTEEEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEE
T ss_pred EEEeCCCCEEEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEE
Confidence 45556679999999999999988754499999999932 56899999999999999999999864 23589999
Q ss_pred EEecCCCCC--CCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 158 VFDHDTFSA--DDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 158 V~d~~~~~~--d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
|||++.++. +++||++.|+|..+..+ .....||++..
T Consensus 97 V~d~d~~~~~~~~~iG~~~i~l~~~~~~------------~~~~~W~~L~~ 135 (142)
T 2dmg_A 97 VKNSGGFLSKDKGLLGKVLVALASEELA------------KGWTQWYDLTE 135 (142)
T ss_dssp EEECCCSSCCSCCCCEEEEEECCCSTTT------------TCBCCBCCCBC
T ss_pred EEECCCccccCCcEEEEEEEeccccccc------------ccccceeeccC
Confidence 999998764 57999999999988432 24678988655
No 36
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.76 E-value=1.6e-17 Score=130.00 Aligned_cols=88 Identities=23% Similarity=0.367 Sum_probs=74.8
Q ss_pred eeeEEEEEEEEeecCCCCCCCCCCcEEEEEECCeEEeeeeec-CcCCceeeeeEEEEeeCCCccEEEEEEecCCCCCCCe
Q 025708 91 FIGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQQTVQTTIVK-SNLNPVWNEELMLSVPQEYGPVKLEVFDHDTFSADDI 169 (249)
Q Consensus 91 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~~~kT~~~~-~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~~~~~d~~ 169 (249)
..+.|+|+|++|++|+ ..+.+||||++. .+..+|++++ ++.||.|||+|.|.+......|.|+|||++ +++|++
T Consensus 12 ~~~~L~V~V~~A~~l~--~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 86 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG--AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 86 (167)
T ss_dssp CCCEEEEEEEEEECSS--CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEE
T ss_pred ceEEEEEEEEEEECCC--CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCce
Confidence 4689999999999885 234789999999 3345676665 699999999999999876678999999999 889999
Q ss_pred eEEEEEechhhhhh
Q 025708 170 MGEAEIDIQPLLTS 183 (249)
Q Consensus 170 iG~~~i~l~~l~~~ 183 (249)
||++.|+|.++...
T Consensus 87 iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 87 VGTVWIPLRTIRQS 100 (167)
T ss_dssp EEEEEEEGGGSCBC
T ss_pred EEEEEEEHHHhccc
Confidence 99999999998643
No 37
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.76 E-value=7.6e-18 Score=126.66 Aligned_cols=87 Identities=23% Similarity=0.363 Sum_probs=73.4
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCcEEEEEECCeEEeeeeec-CcCCceeeeeEEEEeeCCCccEEEEEEecCCCCCCCee
Q 025708 92 IGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQQTVQTTIVK-SNLNPVWNEELMLSVPQEYGPVKLEVFDHDTFSADDIM 170 (249)
Q Consensus 92 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~~~kT~~~~-~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~~~~~d~~i 170 (249)
.+.|+|+|++|++|+. .+.+||||++. .+..+|++++ ++.||.|||+|.|.+......|.|+|||++ +++|++|
T Consensus 4 ~~~L~V~V~~A~~l~~--~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~i 78 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA--QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMV 78 (131)
T ss_dssp CEEEEEEEEEEECSSC--GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEEE
T ss_pred ceEEEEEEEEeECCCC--CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCeE
Confidence 4899999999998853 34789999999 3344565554 799999999999999876678999999999 8899999
Q ss_pred EEEEEechhhhhh
Q 025708 171 GEAEIDIQPLLTS 183 (249)
Q Consensus 171 G~~~i~l~~l~~~ 183 (249)
|++.|+|.++...
T Consensus 79 G~~~i~l~~l~~~ 91 (131)
T 2cjt_A 79 GTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEGGGSCBC
T ss_pred EEEEEEHHHhhhc
Confidence 9999999998543
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.76 E-value=5.1e-18 Score=144.64 Aligned_cols=96 Identities=30% Similarity=0.546 Sum_probs=83.7
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEE---CCeEEeeeeecCcCCceeeeeEEEEeeCC---CccEEEE
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRL---GQQTVQTTIVKSNLNPVWNEELMLSVPQE---YGPVKLE 157 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l---~~~~~kT~~~~~t~~P~W~e~f~f~v~~~---~~~L~i~ 157 (249)
++.|....+.|.|+|++|++|+.++.. .+||||++++ +.+.++|+++++++||.|||+|.|.+... ...|.|+
T Consensus 12 ~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~ 91 (296)
T 1dqv_A 12 ALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFS 91 (296)
T ss_dssp EEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEE
T ss_pred EEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEE
Confidence 355666789999999999999998876 8999999999 45678999999999999999999998652 4589999
Q ss_pred EEecCCCCCCCeeEEEEEe-chhh
Q 025708 158 VFDHDTFSADDIMGEAEID-IQPL 180 (249)
Q Consensus 158 V~d~~~~~~d~~iG~~~i~-l~~l 180 (249)
|||++.+++|++||++.++ +.++
T Consensus 92 V~d~d~~~~~~~iG~~~i~~l~~~ 115 (296)
T 1dqv_A 92 VYDFDRFSRHDLIGQVVLDNLLEL 115 (296)
T ss_dssp EEECCSSSCCCEEEEEECCCTTGG
T ss_pred EEEcCCCCCCceEEEEEecccccc
Confidence 9999999999999999996 4444
No 39
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=5.5e-18 Score=143.38 Aligned_cols=119 Identities=29% Similarity=0.363 Sum_probs=95.7
Q ss_pred cceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEEC--C---eEEeeeeecCcCCceeeeeEEEEeeCC---CccEEEEE
Q 025708 88 MVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLG--Q---QTVQTTIVKSNLNPVWNEELMLSVPQE---YGPVKLEV 158 (249)
Q Consensus 88 ~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~--~---~~~kT~~~~~t~~P~W~e~f~f~v~~~---~~~L~i~V 158 (249)
+....+.|.|.|++|++|+..+.. .+||||++++. + .+++|+++++++||.|||+|.|.+... ...|.|+|
T Consensus 145 ~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 224 (284)
T 2r83_A 145 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 224 (284)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEE
T ss_pred ecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEE
Confidence 334467899999999999998876 89999999984 2 457999999999999999999998763 34699999
Q ss_pred EecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 159 FDHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 159 ~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
||++.++++++||++.+++..+..+..++.......+..+..|++|..
T Consensus 225 ~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 225 LDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp EECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred EeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 999999999999999999988755444432222244567889998654
No 40
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.74 E-value=3.8e-17 Score=149.08 Aligned_cols=93 Identities=24% Similarity=0.342 Sum_probs=83.2
Q ss_pred ccccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECCeEEeeeeecCcCCceeeeeEEEEeeC--CCccEEEEEEec
Q 025708 85 DVGMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQQTVQTTIVKSNLNPVWNEELMLSVPQ--EYGPVKLEVFDH 161 (249)
Q Consensus 85 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~kT~~~~~t~~P~W~e~f~f~v~~--~~~~L~i~V~d~ 161 (249)
.++.....+.|+|+|++|++|+. |.. .+||||+|.++.++++|+++++++||+|||+|.|.+.. ....|.|+|||+
T Consensus 386 ~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~ 464 (540)
T 3nsj_A 386 CCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDA 464 (540)
T ss_dssp GCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEEC
T ss_pred cccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEEC
Confidence 34455557999999999999998 765 89999999999989999999999999999999998643 567899999999
Q ss_pred CCCCCCCeeEEEEEech
Q 025708 162 DTFSADDIMGEAEIDIQ 178 (249)
Q Consensus 162 ~~~~~d~~iG~~~i~l~ 178 (249)
|.+++||+||.+.++|.
T Consensus 465 D~~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 465 DYGWDDDLLGSCDRSPH 481 (540)
T ss_dssp CSSSCCEEEEEEEECCC
T ss_pred CCCCCCCEEEEEEEEee
Confidence 99999999999999987
No 41
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.73 E-value=1.7e-16 Score=118.87 Aligned_cols=89 Identities=11% Similarity=0.177 Sum_probs=81.1
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCcEEEEEECCeEEeeeeec-CcCCceeeeeEEEEeeC---CCccEEEEEEecCCCCCC
Q 025708 92 IGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQQTVQTTIVK-SNLNPVWNEELMLSVPQ---EYGPVKLEVFDHDTFSAD 167 (249)
Q Consensus 92 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~~~kT~~~~-~t~~P~W~e~f~f~v~~---~~~~L~i~V~d~~~~~~d 167 (249)
-..|+|.|.+|.+|+. .+|||+++.+.+.+++|++++ ++.||+|||.|+|++.. ....|.|.|+|+++++++
T Consensus 20 ~msL~V~l~~a~~Lpg----~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~n 95 (144)
T 3l9b_A 20 HMALIVHLKTVSELRG----RADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSN 95 (144)
T ss_dssp CEEEEEEEEEEESCCS----CEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCC
T ss_pred cEEEEEEEEEecCCCC----CCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCC
Confidence 3568999999999984 569999999999999999998 69999999999999876 457899999999999999
Q ss_pred CeeEEEEEechhhhhhh
Q 025708 168 DIMGEAEIDIQPLLTSA 184 (249)
Q Consensus 168 ~~iG~~~i~l~~l~~~~ 184 (249)
.+||++.++|.++..++
T Consensus 96 rlIG~~~i~Lq~lv~~~ 112 (144)
T 3l9b_A 96 KLIGTFRMVLQKVVEEN 112 (144)
T ss_dssp EEEEEEEEESHHHHHHS
T ss_pred CEEEEEEEEhHHhccCC
Confidence 99999999999997664
No 42
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.67 E-value=1.2e-17 Score=142.28 Aligned_cols=121 Identities=25% Similarity=0.375 Sum_probs=99.3
Q ss_pred ccceeeeEEEEEEEEeecCCCCCCC-CCCcEEEEEEC--C---eEEeeeeecCcCCceeeeeEEEEeeCC---CccEEEE
Q 025708 87 GMVEFIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLG--Q---QTVQTTIVKSNLNPVWNEELMLSVPQE---YGPVKLE 157 (249)
Q Consensus 87 ~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~--~---~~~kT~~~~~t~~P~W~e~f~f~v~~~---~~~L~i~ 157 (249)
.+....|.|.|.|++|++|+.++.. .+||||++++. + .+++|++++++.||.|||+|.|.+... ...|.|+
T Consensus 146 ~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 225 (296)
T 1dqv_A 146 CYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIA 225 (296)
T ss_dssp EEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCE
T ss_pred EeccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEE
Confidence 3444568999999999999998875 78999999995 2 468999999999999999999998763 3579999
Q ss_pred EEecCCCCCCCeeEEEEEechhhhh-hhhhcCCCCCcCCeeeeeeEecCCC
Q 025708 158 VFDHDTFSADDIMGEAEIDIQPLLT-SALAFGDPEMFGNMQIGKWLKSDDN 207 (249)
Q Consensus 158 V~d~~~~~~d~~iG~~~i~l~~l~~-~~~~~~~~~~~~~~~~~~w~~~~~~ 207 (249)
|||++.++++++||.+.|++..+.. +..++..+....+..+..|++|...
T Consensus 226 V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 226 VVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp EEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred EEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 9999999999999999999998765 4444443444467788999987654
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.67 E-value=1.2e-16 Score=150.24 Aligned_cols=105 Identities=19% Similarity=0.380 Sum_probs=90.4
Q ss_pred eeeeEEEEEEEEeecCCC---CCCC-CCCcEEEEEEC---CeEEeeeeecCcCCceeeeeEEEEeeC-CCccEEEEEEec
Q 025708 90 EFIGLLKVKVVKGINLAI---RDMM-SSDPYVVLRLG---QQTVQTTIVKSNLNPVWNEELMLSVPQ-EYGPVKLEVFDH 161 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~---~~~~-~~dpyv~v~l~---~~~~kT~~~~~t~~P~W~e~f~f~v~~-~~~~L~i~V~d~ 161 (249)
...+.|+|+|++|++|+. ++.. .+||||+++++ ..+++|+++++++||+|||+|.|.+.. ....|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 357999999999999998 6653 89999999997 367899999999999999999999987 567899999999
Q ss_pred CCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCC
Q 025708 162 DTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDN 207 (249)
Q Consensus 162 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~ 207 (249)
|.++ |++||++.|+|.++.. +.....|++|...
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~------------g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKV------------GEKKEVPFIFNQV 127 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCT------------TCCCCEEEEETTT
T ss_pred CCCC-CceeEEEEEEHHHcCC------------CCceEEEEecCCC
Confidence 9998 9999999999999843 2345689986553
No 44
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.65 E-value=8.8e-16 Score=142.74 Aligned_cols=92 Identities=26% Similarity=0.421 Sum_probs=81.7
Q ss_pred eeeEEEEEEEEeecCCCCCC---CCCCcEEEEEECC-----eEEeeeeecCc-CCceeeeeEEEEeeCC-CccEEEEEEe
Q 025708 91 FIGLLKVKVVKGINLAIRDM---MSSDPYVVLRLGQ-----QTVQTTIVKSN-LNPVWNEELMLSVPQE-YGPVKLEVFD 160 (249)
Q Consensus 91 ~~g~L~V~v~~a~~L~~~~~---~~~dpyv~v~l~~-----~~~kT~~~~~t-~~P~W~e~f~f~v~~~-~~~L~i~V~d 160 (249)
..+.|+|+|++|++|+..+. +.+||||+|.+.+ .+++|++++++ .||+|||+|.|.+..+ ...|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56899999999999998873 4899999999933 57899999997 9999999999998763 3679999999
Q ss_pred cCCCCCCCeeEEEEEechhhhh
Q 025708 161 HDTFSADDIMGEAEIDIQPLLT 182 (249)
Q Consensus 161 ~~~~~~d~~iG~~~i~l~~l~~ 182 (249)
+|.++++++||++.++|..|..
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCC
T ss_pred cCCCCCCceeEEEEEEHHHcCC
Confidence 9999999999999999999843
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.59 E-value=1.5e-16 Score=144.19 Aligned_cols=101 Identities=15% Similarity=0.229 Sum_probs=14.9
Q ss_pred eeeeEEEEEEEEeecCCCCCCCCCCcEEEEEECCe-EEeeeeecCc---CCceeeeeEEEEeeCCCccEEEEEEec-C--
Q 025708 90 EFIGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQQ-TVQTTIVKSN---LNPVWNEELMLSVPQEYGPVKLEVFDH-D-- 162 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~-~~kT~~~~~t---~~P~W~e~f~f~v~~~~~~L~i~V~d~-~-- 162 (249)
...+.|+|+|++|++|++++ ||||++.+++. ..||+++++| .||.|||+|.|.+......|.|+|||. +
T Consensus 8 r~~~~L~V~VieAk~L~~~d----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK 83 (483)
T ss_dssp EEEECC-------------------------------------------------CCEECC-------------------
T ss_pred eeccEEEEEEEEcCCcCCCC----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc
Confidence 45689999999999999877 99999999875 5799999999 999999999999655457899999994 4
Q ss_pred -CCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCC
Q 025708 163 -TFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDD 206 (249)
Q Consensus 163 -~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~ 206 (249)
..++|++||.+.|++..+..+ ...+.||++.+
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~------------~~~~~W~~L~~ 116 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGR------------HFTEQWYPVTL 116 (483)
T ss_dssp -----------------------------------CCEECC----
T ss_pred ccCCCCceEEEEEEEHHHhcCC------------CCCCeEEECCC
Confidence 367899999999999998432 35678998754
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.49 E-value=7.8e-14 Score=131.29 Aligned_cols=103 Identities=32% Similarity=0.498 Sum_probs=88.8
Q ss_pred eeEEEEEEEEeecCCCCCCC-CCCcEEEEEE-----CCeEEeeeeecCcCCceeeeeEEEEeeC--CCccEEEEEEecCC
Q 025708 92 IGLLKVKVVKGINLAIRDMM-SSDPYVVLRL-----GQQTVQTTIVKSNLNPVWNEELMLSVPQ--EYGPVKLEVFDHDT 163 (249)
Q Consensus 92 ~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~kT~~~~~t~~P~W~e~f~f~v~~--~~~~L~i~V~d~~~ 163 (249)
.+.|.|.|++|++|++++.. .+||||++.+ ...+++|+++++++||.|||+|.|.+.. ....|.|+|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 47899999999999999886 8999999999 3456899999999999999999999875 34569999999999
Q ss_pred CCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCC
Q 025708 164 FSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDN 207 (249)
Q Consensus 164 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~ 207 (249)
+++|++||.+.++|.++.... .+.|+.+...
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~-------------~~~w~~Lls~ 281 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG-------------VDGWFKLLSQ 281 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC-------------EEEEEECBCT
T ss_pred ccccccccccccchhhhccCC-------------cccceeeccc
Confidence 999999999999999986542 4678876543
No 47
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.33 E-value=6.6e-11 Score=86.07 Aligned_cols=115 Identities=10% Similarity=0.217 Sum_probs=84.6
Q ss_pred eeeEEEEEEEEeecCCCCCCC-CCCcEEEEEECCeE----Eee-eeecCcCCceeeeeEEEEeeCCCccEEEEEEecCCC
Q 025708 91 FIGLLKVKVVKGINLAIRDMM-SSDPYVVLRLGQQT----VQT-TIVKSNLNPVWNEELMLSVPQEYGPVKLEVFDHDTF 164 (249)
Q Consensus 91 ~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~----~kT-~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~d~~~~ 164 (249)
....|+|.+.++.--+.+... ..||||.+.+.... .+| .+.++|..|.||++|.-.+... +.|.|.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~a~- 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG-RVIQIVLMRAAE- 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT-CEEEEEEEEETT-
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC-EEEEEEEEcCCC-
Confidence 456788888776532222222 67999999996643 254 6777899999999999998764 799999997554
Q ss_pred CCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCceEEEEEEE
Q 025708 165 SADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESGELELELEW 244 (249)
Q Consensus 165 ~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~l~l~~ 244 (249)
+|++.|.|++++|+...+.. +... ++|+.|+. .|+|++.++|
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~-------~g~~--------------------------e~WvdLeP--~Gkl~~~i~~ 123 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKN-------NGKA--------------------------EFWLDLQP--QAKVLMSVQY 123 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTT-------TTEE--------------------------EEEEECBS--SCEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccC-------CCce--------------------------EEEEeccc--CcEEEEEEEE
Confidence 89999999999998653221 1122 55666654 8999999998
Q ss_pred E
Q 025708 245 M 245 (249)
Q Consensus 245 ~ 245 (249)
.
T Consensus 124 ~ 124 (126)
T 1yrk_A 124 F 124 (126)
T ss_dssp E
T ss_pred e
Confidence 5
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.33 E-value=9.1e-12 Score=118.96 Aligned_cols=85 Identities=21% Similarity=0.419 Sum_probs=70.9
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCcEEEEEECC------eEEeeeeecC-cCCceeee-eEEEE-eeC-CCccEEEEEEec
Q 025708 92 IGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQ------QTVQTTIVKS-NLNPVWNE-ELMLS-VPQ-EYGPVKLEVFDH 161 (249)
Q Consensus 92 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~------~~~kT~~~~~-t~~P~W~e-~f~f~-v~~-~~~~L~i~V~d~ 161 (249)
...|+|+|++|++|+.. .+||||+|.+.+ .+++|+++++ ++||+||| +|.|. |.. ....|+|+|||+
T Consensus 724 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp CEEEEEEEEEEESCCSS---CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred ceEEEEEEEEeccCccc---CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 45899999999999853 579999999943 3479999976 59999999 69998 644 345799999998
Q ss_pred CCCCCCCeeEEEEEechhhhhh
Q 025708 162 DTFSADDIMGEAEIDIQPLLTS 183 (249)
Q Consensus 162 ~~~~~d~~iG~~~i~l~~l~~~ 183 (249)
+ +++||++.++|..|..+
T Consensus 801 d----ddfiG~~~lpL~~L~~G 818 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRSG 818 (885)
T ss_dssp T----TEEEEEEEEETTTCCCE
T ss_pred C----ccEEeeEEEEHHHcCCC
Confidence 7 79999999999999544
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.33 E-value=1.9e-11 Score=116.02 Aligned_cols=85 Identities=15% Similarity=0.394 Sum_probs=72.0
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCcEEEEEECC-------eEEeeeeecC-cCCceeeee-EEEE-eeC-CCccEEEEEEe
Q 025708 92 IGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQ-------QTVQTTIVKS-NLNPVWNEE-LMLS-VPQ-EYGPVKLEVFD 160 (249)
Q Consensus 92 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~-------~~~kT~~~~~-t~~P~W~e~-f~f~-v~~-~~~~L~i~V~d 160 (249)
.+.|+|+|++|++|+.. .+||||+|.+.+ .+++|+++++ +.||+|||+ |.|. +.. ....|+|+|||
T Consensus 649 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK---QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp CEEEEEEEEEEECCCSS---CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC---CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 47899999999999854 579999999953 5679999886 699999998 9998 654 33579999999
Q ss_pred cCCCCCCCeeEEEEEechhhhhh
Q 025708 161 HDTFSADDIMGEAEIDIQPLLTS 183 (249)
Q Consensus 161 ~~~~~~d~~iG~~~i~l~~l~~~ 183 (249)
++ +++||.+.++|..|..+
T Consensus 726 ~d----ddfiG~~~ipL~~L~~G 744 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPG 744 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCE
T ss_pred cC----CCeeeEEEEEHHHcCCc
Confidence 85 78999999999999654
No 50
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.33 E-value=5.4e-11 Score=87.64 Aligned_cols=119 Identities=14% Similarity=0.247 Sum_probs=87.1
Q ss_pred ccceeeeEEEEEEEEeecCCCCC--CCCCCcEEEEEECCeE----Eee-eeecCcCCceeeeeEEEEeeCCCccEEEEEE
Q 025708 87 GMVEFIGLLKVKVVKGINLAIRD--MMSSDPYVVLRLGQQT----VQT-TIVKSNLNPVWNEELMLSVPQEYGPVKLEVF 159 (249)
Q Consensus 87 ~~~~~~g~L~V~v~~a~~L~~~~--~~~~dpyv~v~l~~~~----~kT-~~~~~t~~P~W~e~f~f~v~~~~~~L~i~V~ 159 (249)
+.....+.|+|.+.++.-.+.+. ....||||.+.+.... .+| .+.++|..|+||++|.-.+... +.|.|.|+
T Consensus 4 ~~~~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G-r~l~i~Vf 82 (138)
T 2enj_A 4 GSSGMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG-RVMQIIVK 82 (138)
T ss_dssp CCSSCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS-CEEEEEEE
T ss_pred cccccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC-eEEEEEEE
Confidence 33445677888887776544332 2368999999996542 566 6677899999999999888764 79999999
Q ss_pred ecCCCCCCCeeEEEEEechhhhhhhhhcCCCCCcCCeeeeeeEecCCCccccCCceeeeCCeEEEEEEEEeccccCceEE
Q 025708 160 DHDTFSADDIMGEAEIDIQPLLTSALAFGDPEMFGNMQIGKWLKSDDNALLEDSTINIIDGKVKQKISLKLQNVESGELE 239 (249)
Q Consensus 160 d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~g~~~~~~~l~l~~~~~G~i~ 239 (249)
+... +|++.+.|++++|+...+.. +... ++|+.|+. .|+|+
T Consensus 83 h~a~----~fVAn~tV~~edL~~~ck~~-------~g~~--------------------------e~WvdLeP--~Gkl~ 123 (138)
T 2enj_A 83 GKNV----DLISETTVELYSLAERCRKN-------NGKT--------------------------EIWLELKP--QGRML 123 (138)
T ss_dssp CSSC----SCCEEEEEESHHHHHHHHHT-------TTCE--------------------------EEEEECBS--SCEEE
T ss_pred cCCC----CeeeEEEEEHHHHHhhhccC-------CCce--------------------------EEEEeccc--CcEEE
Confidence 6544 89999999999998653221 1122 55555654 89999
Q ss_pred EEEEEE
Q 025708 240 LELEWM 245 (249)
Q Consensus 240 l~l~~~ 245 (249)
+.++|.
T Consensus 124 v~i~~~ 129 (138)
T 2enj_A 124 MNARYF 129 (138)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 999874
No 51
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.28 E-value=2.9e-11 Score=115.10 Aligned_cols=86 Identities=24% Similarity=0.445 Sum_probs=70.9
Q ss_pred eeeEEEEEEEEeecCCCCCCCCCCcEEEEEECC------eEEeee-eecC-cCCceeee-eEEE-EeeC-CCccEEEEEE
Q 025708 91 FIGLLKVKVVKGINLAIRDMMSSDPYVVLRLGQ------QTVQTT-IVKS-NLNPVWNE-ELML-SVPQ-EYGPVKLEVF 159 (249)
Q Consensus 91 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~------~~~kT~-~~~~-t~~P~W~e-~f~f-~v~~-~~~~L~i~V~ 159 (249)
..+.|+|.|++|++|+.. .+||||+|.+.+ ++++|+ ++++ +.||+||| +|.| .+.. ....|+|.||
T Consensus 676 ~~~~L~V~Visa~~L~~~---~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 676 VATTLSITVISGQFLSER---SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp TCEEEEEEEEEEESCCSS---CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeeEEEEEEeccccCcc---CCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 357999999999999853 579999999932 357899 7764 69999999 6999 7755 3357999999
Q ss_pred ecCCCCCCCeeEEEEEechhhhhh
Q 025708 160 DHDTFSADDIMGEAEIDIQPLLTS 183 (249)
Q Consensus 160 d~~~~~~d~~iG~~~i~l~~l~~~ 183 (249)
|++ +++||.+.++|..|..+
T Consensus 753 D~d----~d~iG~~~ipl~~L~~G 772 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNSG 772 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCCE
T ss_pred EeC----CCccceEeeehhhcCCC
Confidence 986 79999999999999543
No 52
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=99.12 E-value=1.8e-11 Score=91.05 Aligned_cols=49 Identities=41% Similarity=0.703 Sum_probs=41.5
Q ss_pred cccCchHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHhhcccccCCcccc
Q 025708 3 EVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRI 54 (249)
Q Consensus 3 ~~~gn~~~n~~~e~~~p~~~~kp~~~~~~~~~e~~ir~ky~~~~f~~~~~~~ 54 (249)
..+||..||++||+++|+.+.+|+++ ..+|+|||+||++++|+.+..+.
T Consensus 84 ~~~GN~~an~~~e~~lp~~~~~P~~~---~~~e~fIr~KY~~k~f~~~~~~i 132 (134)
T 2iqj_A 84 QEMGNGKANRLYEAYLPETFRRPQID---PAVEGFIRDKYEKKKYMDRSLDI 132 (134)
T ss_dssp HTCHHHHHHHHHTTTCCSSCCCCCSH---HHHHHHHHHHHTSCTTCCTTC--
T ss_pred HHHchHHHHHHHHhcCCccCCCCCch---HHHHHHHHHHHhCCeeeCCcccc
Confidence 45699999999999999999998764 46889999999999999876543
No 53
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=3.5e-11 Score=90.28 Aligned_cols=49 Identities=33% Similarity=0.563 Sum_probs=42.0
Q ss_pred ccccCchHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHhhcccccCCccc
Q 025708 2 IEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLR 53 (249)
Q Consensus 2 ~~~~gn~~~n~~~e~~~p~~~~kp~~~~~~~~~e~~ir~ky~~~~f~~~~~~ 53 (249)
+..+||..||++||+++|+.+.+|+++ ..+|+|||+||+.++|+.+...
T Consensus 85 m~~~GN~~an~~~e~~lp~~~~~P~~~---~~~e~fIr~KY~~k~f~~~~~~ 133 (141)
T 2crr_A 85 MQDMGNTKARLLYEANLPENFRRPQTD---QAVEFFIRDKYEKKKYYDKNAI 133 (141)
T ss_dssp HHHTHHHHHHHHGGGSCCTTCCCCCSH---HHHHHHHHHHHTSCTTCCCGGG
T ss_pred HHHHccHHHHHHHHhcCCcccCCCCch---HHHHHHHHHHHhcCcccCCCcc
Confidence 345699999999999999999898765 4688999999999999976543
No 54
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.00 E-value=1e-10 Score=102.85 Aligned_cols=58 Identities=31% Similarity=0.521 Sum_probs=50.7
Q ss_pred ccccCchHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHhhcccccCCccccCCCCC
Q 025708 2 IEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRIASGKP 59 (249)
Q Consensus 2 ~~~~gn~~~n~~~e~~~p~~~~kp~~~~~~~~~e~~ir~ky~~~~f~~~~~~~~ss~~ 59 (249)
+..+||..||++||+++|.++.+|+++++...||+|||+||+.++|+.+..+.+++.+
T Consensus 89 ~~~~gN~~~~~~~e~~~~~~~~~p~~~~~~~~~e~fIr~KY~~~~f~~~~~~~~~~~~ 146 (386)
T 3lju_X 89 MASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAG 146 (386)
T ss_dssp HHHSSHHHHHHHHTTTCCTTSCCCCTTSCHHHHHHHHHHHHTSCTTTSGGGGHHHHSS
T ss_pred HHHhcchHHHHHHhccCCccCCCCCCccchHHHHHEHHhhhCCCEEECCccCcccccc
Confidence 3456999999999999999999999999999999999999999999998875444433
No 55
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=98.88 E-value=3.4e-10 Score=84.79 Aligned_cols=52 Identities=17% Similarity=0.366 Sum_probs=41.1
Q ss_pred ccccCchHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHHHhhcccccCCcccc
Q 025708 2 IEVGGNSSANAIYEAFIPE-GVSKPGPDSSHEIRSKFIRSKYELQEFLKPSLRI 54 (249)
Q Consensus 2 ~~~~gn~~~n~~~e~~~p~-~~~kp~~~~~~~~~e~~ir~ky~~~~f~~~~~~~ 54 (249)
+..+||..+|++||+++|+ .+.+|++.+ ...+++|||+||+.++|+.+....
T Consensus 80 m~~~GN~~an~~~e~~~~~~~~~~P~~~d-~~~~~~fIr~KYe~k~f~~~~~~~ 132 (140)
T 2olm_A 80 LQKHGNEVCKQIWLGLFDDRSSAIPDFRD-PQKVKEFLQEKYEKKRWYVPPEQA 132 (140)
T ss_dssp HHHCHHHHHHHHHTTTCCTTTSCCCCTTC-HHHHHHHHHHHHTSCTTCCCHHHH
T ss_pred HHHhccHHHHHHHHhhCCcccCCCCCCCC-HHHHHHHHHHHHcCCeeeCCcccc
Confidence 3457999999999999986 456776544 456788999999999999876543
No 56
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.76 E-value=4e-09 Score=92.23 Aligned_cols=51 Identities=35% Similarity=0.518 Sum_probs=45.3
Q ss_pred ccccCchHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHHHhhcccccCCcc
Q 025708 2 IEVGGNSSANAIYEAFIPE-GVSKPGPDSSHEIRSKFIRSKYELQEFLKPSL 52 (249)
Q Consensus 2 ~~~~gn~~~n~~~e~~~p~-~~~kp~~~~~~~~~e~~ir~ky~~~~f~~~~~ 52 (249)
+..+||..+|++||+++|. +..||.|++++++||+|||+||++++|+.+..
T Consensus 101 ~~~~gn~~~n~~~e~~~~~~~~~kp~~~~~~~~re~fIr~KY~~k~f~~~l~ 152 (368)
T 3jue_A 101 MCELGNVIINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLP 152 (368)
T ss_dssp HHHSCHHHHHHHHTTTTTTTTCCCCCTTSCHHHHHHHHHHHHTSCTTCCSCC
T ss_pred HHHHccHHHHHHHHhhcccccCcCCCCCCCHHHHHHHHHHHHHhhcccccch
Confidence 3456999999999999997 56899999999999999999999999997643
No 57
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.02 E-value=3.3e-06 Score=70.60 Aligned_cols=49 Identities=29% Similarity=0.458 Sum_probs=43.3
Q ss_pred cccCchHHHHHHhhcCCCCC-CCCCCCCCHHHHHHHHHHHhhcccccCCc
Q 025708 3 EVGGNSSANAIYEAFIPEGV-SKPGPDSSHEIRSKFIRSKYELQEFLKPS 51 (249)
Q Consensus 3 ~~~gn~~~n~~~e~~~p~~~-~kp~~~~~~~~~e~~ir~ky~~~~f~~~~ 51 (249)
..+||..+|++||+.+|... .||++.+++..+++||++||..++|..+.
T Consensus 74 ~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~ 123 (278)
T 1dcq_A 74 KNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKK 123 (278)
T ss_dssp HHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCC
T ss_pred HHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhccccc
Confidence 34699999999999999755 49999999999999999999999988653
No 58
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=97.97 E-value=5e-06 Score=70.35 Aligned_cols=48 Identities=31% Similarity=0.438 Sum_probs=43.4
Q ss_pred cccCchHHHHHHhhcCCCC-CCCCCCCCCHHHHHHHHHHHhhcccccCC
Q 025708 3 EVGGNSSANAIYEAFIPEG-VSKPGPDSSHEIRSKFIRSKYELQEFLKP 50 (249)
Q Consensus 3 ~~~gn~~~n~~~e~~~p~~-~~kp~~~~~~~~~e~~ir~ky~~~~f~~~ 50 (249)
..+||..+|++||+.+|.. +.+|.+.++...|++||++||..+.|..+
T Consensus 99 ~~~GN~~~n~i~E~~l~~~~~~kP~~~s~~~~r~~~I~~Ky~~~~f~~~ 147 (301)
T 2b0o_E 99 LNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARR 147 (301)
T ss_dssp HHCCHHHHHHHHTTTCCSSSCSCCCTTCCHHHHHHHHHHHHTSCTTSCC
T ss_pred HHcCCHHHHHHHHHhhhhccCCCCCCcccHHHHHHHHHHHHHhhhhhcc
Confidence 3469999999999999985 78999999999999999999999998764
No 59
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=97.95 E-value=9.1e-06 Score=73.50 Aligned_cols=50 Identities=32% Similarity=0.469 Sum_probs=44.3
Q ss_pred ccccCchHHHHHHhhcCCC-CCCCCCCCCCHHHHHHHHHHHhhcccccCCc
Q 025708 2 IEVGGNSSANAIYEAFIPE-GVSKPGPDSSHEIRSKFIRSKYELQEFLKPS 51 (249)
Q Consensus 2 ~~~~gn~~~n~~~e~~~p~-~~~kp~~~~~~~~~e~~ir~ky~~~~f~~~~ 51 (249)
+..+||..+|++||+.+|. ...+|.+.+....|++||++||+.+.|..+.
T Consensus 79 ~~~~GN~~an~i~E~~lp~~~~~kP~~~s~~~~re~fIraky~~~~f~~~~ 129 (497)
T 3lvq_E 79 ALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRC 129 (497)
T ss_dssp TTTCCHHHHHHHHTTTCCSSSCSCCCTTCCHHHHHHHHHHHHTTCTTSCCC
T ss_pred HHHHhhHHHHHHHHhhcccccCCCCCCcCcHHHHHHHHHHHhhcccccccc
Confidence 4566999999999999996 4589999999999999999999999997643
No 60
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=94.82 E-value=0.67 Score=36.88 Aligned_cols=54 Identities=13% Similarity=0.281 Sum_probs=41.7
Q ss_pred EEeeeeecCcCCceeeeeEEEEeeC---CCccEEEEEEecCCC----CCCCeeEEEEEech
Q 025708 125 TVQTTIVKSNLNPVWNEELMLSVPQ---EYGPVKLEVFDHDTF----SADDIMGEAEIDIQ 178 (249)
Q Consensus 125 ~~kT~~~~~t~~P~W~e~f~f~v~~---~~~~L~i~V~d~~~~----~~d~~iG~~~i~l~ 178 (249)
.++|-+...+.+|.|+|++.+.++. ....|.|++++...- ..+..+|-+.+||-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 4678888889999999999999987 456799999875431 12347888888875
No 61
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=94.68 E-value=0.007 Score=44.84 Aligned_cols=40 Identities=18% Similarity=0.303 Sum_probs=28.6
Q ss_pred cccCchHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHhhccc
Q 025708 3 EVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQE 46 (249)
Q Consensus 3 ~~~gn~~~n~~~e~~~p~~~~kp~~~~~~~~~e~~ir~ky~~~~ 46 (249)
+.+||..+|++||++.+.. | ..+.++.-+.|+.++|..+.
T Consensus 93 ~~~GN~~an~~~e~~~~~~---~-~~~~~~kY~s~~a~~Y~~kL 132 (138)
T 2owa_A 93 DIGGNGRARNYFKQVLGVN---F-SPKTKEYASSICGRQYKQIL 132 (138)
T ss_dssp HHCCHHHHHHHHHHHTCTT---C-CGGGCHHHHSHHHHHHHHHH
T ss_pred HhhccHHHHHHHHHHcCCC---C-CCCHHHHHhhHHHHHHHHHH
Confidence 4579999999999965432 2 12334566789999998764
No 62
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.66 E-value=0.0046 Score=46.39 Aligned_cols=18 Identities=33% Similarity=0.530 Sum_probs=15.8
Q ss_pred cccCchHHHHHHhhcCCC
Q 025708 3 EVGGNSSANAIYEAFIPE 20 (249)
Q Consensus 3 ~~~gn~~~n~~~e~~~p~ 20 (249)
+.+||..||++||++.+.
T Consensus 87 ~~~GN~~an~~~e~~~~~ 104 (149)
T 2crw_A 87 QVGGNASASSFFHQHGCS 104 (149)
T ss_dssp HTTCHHHHHHHHHHHCCC
T ss_pred HHHhhHHHHHHHHhcCCC
Confidence 457999999999999965
No 63
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=94.31 E-value=0.38 Score=46.55 Aligned_cols=90 Identities=14% Similarity=0.233 Sum_probs=62.8
Q ss_pred ceeeeEEEEEEEEeecCCCCCCCCCCcEEEEEE--CCeE----EeeeeecCcCCceeeeeEEEEeeC----CCccEEEEE
Q 025708 89 VEFIGLLKVKVVKGINLAIRDMMSSDPYVVLRL--GQQT----VQTTIVKSNLNPVWNEELMLSVPQ----EYGPVKLEV 158 (249)
Q Consensus 89 ~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l--~~~~----~kT~~~~~t~~P~W~e~f~f~v~~----~~~~L~i~V 158 (249)
-.....+.|.|..+.++...+ ..+-||.+.+ |++. ..|..+.-..+|.|||.+.|++.- ....|.|+|
T Consensus 213 ~~~~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 213 WSLEQPFSIELIEGRKVNADE--RMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp TTCCSEEEEEEEEEECCCC-----CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred hhcCCceEEEEEEecccCCCC--CceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEE
Confidence 345678999999999987543 3467888776 5432 455555557789999999998754 356799999
Q ss_pred EecCCC--C----------CCCeeEEEEEechhh
Q 025708 159 FDHDTF--S----------ADDIMGEAEIDIQPL 180 (249)
Q Consensus 159 ~d~~~~--~----------~d~~iG~~~i~l~~l 180 (249)
|+...- + .+..||.+.++|-+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECC
Confidence 995321 1 235899999998764
No 64
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=92.69 E-value=0.65 Score=45.52 Aligned_cols=90 Identities=18% Similarity=0.182 Sum_probs=61.7
Q ss_pred eeeeEEEEEEEEeecCCCCCCCCCCcEEEEEE--CCe----EEeeeeecCcCCceeeeeEEEEeeC----CCccEEEEEE
Q 025708 90 EFIGLLKVKVVKGINLAIRDMMSSDPYVVLRL--GQQ----TVQTTIVKSNLNPVWNEELMLSVPQ----EYGPVKLEVF 159 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l--~~~----~~kT~~~~~t~~P~W~e~f~f~v~~----~~~~L~i~V~ 159 (249)
.....+.|+|..+.++........+-||.+.+ |.+ ...|..+. ..+|.|||.+.|++.- ....|.|+||
T Consensus 352 ~~~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 352 VINSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp GCCSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred hCCCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 34578999999999886443224577888887 432 24444333 4578899999999754 3567999999
Q ss_pred ecCCC----CCCCeeEEEEEechhh
Q 025708 160 DHDTF----SADDIMGEAEIDIQPL 180 (249)
Q Consensus 160 d~~~~----~~d~~iG~~~i~l~~l 180 (249)
+.... ..+..||.+.++|-+.
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCT
T ss_pred EecCccCcccccceeEEeeeeeEcc
Confidence 86542 1235799999999765
No 65
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=91.93 E-value=1.2 Score=43.22 Aligned_cols=91 Identities=13% Similarity=0.094 Sum_probs=58.1
Q ss_pred eeeeEEEEEEEEeecCCCCCCCCCCcEEEEEE--CCeE---EeeeeecCcCCceeeeeEEEEeeC----CCccEEEEEEe
Q 025708 90 EFIGLLKVKVVKGINLAIRDMMSSDPYVVLRL--GQQT---VQTTIVKSNLNPVWNEELMLSVPQ----EYGPVKLEVFD 160 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l--~~~~---~kT~~~~~t~~P~W~e~f~f~v~~----~~~~L~i~V~d 160 (249)
.....+.|.|..+...........+-||.+.+ |... .+|..+.-+.+|.|||.+.|++.- ....|.|+||+
T Consensus 215 ~~~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 294 (961)
T 1e7u_A 215 DCDRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYC 294 (961)
T ss_dssp CCCSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred eccCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEe
Confidence 34567889999876422111124567888765 5543 334444446689999999998754 35679999997
Q ss_pred cCCCC----------------CCCeeEEEEEechhh
Q 025708 161 HDTFS----------------ADDIMGEAEIDIQPL 180 (249)
Q Consensus 161 ~~~~~----------------~d~~iG~~~i~l~~l 180 (249)
....+ ....||.+.++|-+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 295 GAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EEC--------------------CEEEEEEEESBCT
T ss_pred cccCccccccccccccccccccceeEEEEeeeeecC
Confidence 53211 245899999998765
No 66
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=89.59 E-value=3.3 Score=31.02 Aligned_cols=92 Identities=14% Similarity=0.170 Sum_probs=61.7
Q ss_pred eeeeEEEEEEEEeecCCCCC--CCCCCcE--EEEEE-CCeEEeeeeecCcCCceeeeeEEEEeeCC--------CccEEE
Q 025708 90 EFIGLLKVKVVKGINLAIRD--MMSSDPY--VVLRL-GQQTVQTTIVKSNLNPVWNEELMLSVPQE--------YGPVKL 156 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~--~~~~dpy--v~v~l-~~~~~kT~~~~~t~~P~W~e~f~f~v~~~--------~~~L~i 156 (249)
.-.+.+.|+|.++.--+..- .+..+|+ |.+.+ +-+.+.|.++. ..+|.+|-+-+|.|... ...|.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 34578888988876311100 0123564 44444 33456666665 78999999999988542 357899
Q ss_pred EEEecCCCCCCCeeEEEEEechhhhhh
Q 025708 157 EVFDHDTFSADDIMGEAEIDIQPLLTS 183 (249)
Q Consensus 157 ~V~d~~~~~~d~~iG~~~i~l~~l~~~ 183 (249)
+++.... +....||.+.|+|..++..
T Consensus 94 ELhqa~g-~~~~tla~~~I~l~~lLe~ 119 (156)
T 2yrb_A 94 EVHQAYS-TEYETIAACQLKFHEILEK 119 (156)
T ss_dssp EEEEECS-SCEEEEEEEEECCSHHHHC
T ss_pred EEEEeeC-CCceEEEEEEEEhHHhhCc
Confidence 9988643 3456999999999999754
No 67
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=85.47 E-value=0.18 Score=37.34 Aligned_cols=17 Identities=35% Similarity=0.550 Sum_probs=14.5
Q ss_pred cccCchHHHHHHhhcCC
Q 025708 3 EVGGNSSANAIYEAFIP 19 (249)
Q Consensus 3 ~~~gn~~~n~~~e~~~p 19 (249)
+.+||..||++||++-.
T Consensus 95 ~~~GN~~an~~~e~~g~ 111 (144)
T 2p57_A 95 QVGGNANATAFFRQHGC 111 (144)
T ss_dssp HHCCHHHHHHHHHHTTC
T ss_pred HHhCHHHHHHHHHHcCC
Confidence 45799999999998853
No 68
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=83.74 E-value=1.8 Score=42.52 Aligned_cols=89 Identities=15% Similarity=0.211 Sum_probs=59.2
Q ss_pred eeeeEEEEEEEEeecCCCCCCCCCCcEEEEEE--CCeE----EeeeeecCcCCceeeeeEEEEeeC----CCccEEEEEE
Q 025708 90 EFIGLLKVKVVKGINLAIRDMMSSDPYVVLRL--GQQT----VQTTIVKSNLNPVWNEELMLSVPQ----EYGPVKLEVF 159 (249)
Q Consensus 90 ~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l--~~~~----~kT~~~~~t~~P~W~e~f~f~v~~----~~~~L~i~V~ 159 (249)
.....+.|+|..+.++...+ ..+-||.+.+ |.+. ..|..+.-..+|.|||.+.|++.- ....|.|+||
T Consensus 350 ~~~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 350 DNNNPFQITLVKGNKLNTEE--TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCCSEEEEEECCCCCCCCCS--SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred hcCCCEEEEEEEeccCCCCC--CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 44578999999999887553 3466766554 5543 445555556789999999998754 3467999999
Q ss_pred ecCCC----------------------CCCCeeEEEEEechhh
Q 025708 160 DHDTF----------------------SADDIMGEAEIDIQPL 180 (249)
Q Consensus 160 d~~~~----------------------~~d~~iG~~~i~l~~l 180 (249)
+.... +.+..||.+.++|-+.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 428 AVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CC------------------------------CCEEEEESBCT
T ss_pred EecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 85310 0123889998888654
No 69
>3dwd_A ADP-ribosylation factor GTPase-activating protein; GAP, structural genomics consorti ER-golgi transport, golgi apparatus, GTPase activation; 2.40A {Homo sapiens}
Probab=74.28 E-value=0.69 Score=34.31 Aligned_cols=16 Identities=25% Similarity=0.374 Sum_probs=13.8
Q ss_pred cccCchHHHHHHhhcC
Q 025708 3 EVGGNSSANAIYEAFI 18 (249)
Q Consensus 3 ~~~gn~~~n~~~e~~~ 18 (249)
+.+||..+|++||++.
T Consensus 95 ~~~GN~~an~~~ea~~ 110 (147)
T 3dwd_A 95 KAGGNAKFREFLESQE 110 (147)
T ss_dssp HHCCHHHHHHHHHTST
T ss_pred HHHhhHHHHHHHHhCC
Confidence 4579999999999874
No 70
>3sub_A ADP-ribosylation factor GTPase-activating protein; protein trafficking, hydrolase AC; 2.40A {Plasmodium falciparum 3D7}
Probab=73.84 E-value=0.92 Score=34.22 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=17.4
Q ss_pred ccccCchHHHHHHhhcCCCCC
Q 025708 2 IEVGGNSSANAIYEAFIPEGV 22 (249)
Q Consensus 2 ~~~~gn~~~n~~~e~~~p~~~ 22 (249)
++.+||..+|++||++.++.+
T Consensus 78 m~~~GN~~an~~~e~~g~~~~ 98 (163)
T 3sub_A 78 IDKGGNKKCQTYLENYGISDF 98 (163)
T ss_dssp HHHCCHHHHHHHHHHTTCTTS
T ss_pred HHhhCHHHHHHHHHHcCCccc
Confidence 345799999999999987654
No 71
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=41.60 E-value=5.7 Score=33.31 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=14.4
Q ss_pred cccCchHHHHHHhhcCC
Q 025708 3 EVGGNSSANAIYEAFIP 19 (249)
Q Consensus 3 ~~~gn~~~n~~~e~~~p 19 (249)
..+||..+|++||+..+
T Consensus 94 ~~~gN~~~n~~~e~~~~ 110 (329)
T 3o47_A 94 KAGGNAKFREFLESQED 110 (329)
T ss_dssp HHCCHHHHHHHHHTCSS
T ss_pred HHhCcHHHHHHHHhcCC
Confidence 45699999999999864
No 72
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=20.41 E-value=1.1e+02 Score=21.75 Aligned_cols=18 Identities=11% Similarity=0.289 Sum_probs=14.2
Q ss_pred CCCHHHHHHHHHHHhhcc
Q 025708 28 DSSHEIRSKFIRSKYELQ 45 (249)
Q Consensus 28 ~~~~~~~e~~ir~ky~~~ 45 (249)
.++.++++.||++-+..-
T Consensus 92 Adseee~~~WikAi~~A~ 109 (126)
T 1wi1_A 92 SDDEQDRILWVQAMYRAT 109 (126)
T ss_dssp CSSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 467889999999976544
Done!