BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025709
(249 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435975|ref|XP_002271328.1| PREDICTED: oligoribonuclease [Vitis vinifera]
gi|296083947|emb|CBI24335.3| unnamed protein product [Vitis vinifera]
Length = 245
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 176/249 (70%), Positives = 206/249 (82%), Gaps = 5/249 (2%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M+ LSN FSVL+LDADD Q+ P ++S++ KS + + + N +Q+S
Sbjct: 1 MEKLSNIFSVLQLDADDDQLHMPDSSSTTDKKEKKGKSSSNLVPSKNEKNC----EQDSM 56
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
P E +Y++PLVWIDLEMTGL +EVDRILEIACIITDG L KSVEGPDLVIHQTKECLD+
Sbjct: 57 IPSE-QYRLPLVWIDLEMTGLNVEVDRILEIACIITDGNLIKSVEGPDLVIHQTKECLDN 115
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
MGEWCQ+HH ASGLTKKVL S ++E+EAEKQV+EFVK+NVGTYTPLLAGNSVY+DF+FLK
Sbjct: 116 MGEWCQSHHSASGLTKKVLRSTISEQEAEKQVIEFVKRNVGTYTPLLAGNSVYMDFLFLK 175
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMPDLASLFSHVLVDVSSIKALC+RWYPRD +K PSKE KHRA+DDIRESI ELKYY+E
Sbjct: 176 KYMPDLASLFSHVLVDVSSIKALCIRWYPRDSKKAPSKENKHRAMDDIRESIRELKYYRE 235
Query: 241 NIFKTNLKK 249
NIFK + K
Sbjct: 236 NIFKASKSK 244
>gi|351722973|ref|NP_001238542.1| uncharacterized protein LOC100527858 [Glycine max]
gi|255633388|gb|ACU17051.1| unknown [Glycine max]
Length = 242
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/251 (68%), Positives = 197/251 (78%), Gaps = 12/251 (4%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M+ L+N+FSVLELDADDS V T A S ++ V KS+ S Q+N
Sbjct: 1 MEKLANSFSVLELDADDSHVPT-TADISDKRVNADVDIVPVKSEKQS--------QENPV 51
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
TP EYK+PLVWIDLEMTGL IEVDRILEIACIITDG LTK+VE PDLVIHQTKECLD
Sbjct: 52 TP-SCEYKLPLVWIDLEMTGLNIEVDRILEIACIITDGNLTKTVESPDLVIHQTKECLDR 110
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKK--NVGTYTPLLAGNSVYVDFMF 178
MGEWCQ+HH ASGLTKKVL S ++E EAE+QV+EFVK+ NVG+YTP LAGNS+YVDF F
Sbjct: 111 MGEWCQSHHAASGLTKKVLKSTISEGEAEEQVIEFVKRYVNVGSYTPHLAGNSIYVDFQF 170
Query: 179 LKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYY 238
LKKYMP LASLFSHVLVDVSS+KALC+RWYP+D ++ PSK +HRALDDIRESI E++YY
Sbjct: 171 LKKYMPKLASLFSHVLVDVSSVKALCIRWYPKDQKRAPSKLNRHRALDDIRESIEEIRYY 230
Query: 239 KENIFKTNLKK 249
K NIFK +K
Sbjct: 231 KANIFKPKSRK 241
>gi|357493709|ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula]
gi|355518478|gb|AET00102.1| Oligoribonuclease [Medicago truncatula]
Length = 1551
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/245 (66%), Positives = 198/245 (80%), Gaps = 12/245 (4%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M+ L N+FSVLELDADDS ++ + S SS ++ K++ K + +Q+
Sbjct: 659 MENLVNSFSVLELDADDSTIQPLSLPSGSSGKKANGKALPVKIE-----------KQDQH 707
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
P +Y++PLVWIDLEMTGL IE+DRILEIACIITDG LTKSVEGPDLVIHQTKECLD
Sbjct: 708 NPYLSDYRLPLVWIDLEMTGLNIELDRILEIACIITDGNLTKSVEGPDLVIHQTKECLDG 767
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFL 179
MGEWC++HH ASGLTKKVL S ++EREAE+QV+EFVKK+V GTY PLLAGNS+YVD ++
Sbjct: 768 MGEWCKSHHAASGLTKKVLQSTISEREAEEQVIEFVKKHVGGTYKPLLAGNSIYVDLQYM 827
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
KKYMP+LA +FSHV+VDVSSI ALC+RWYP+D +KVP+K+++HRALDDIRESI ELKYYK
Sbjct: 828 KKYMPELAGIFSHVVVDVSSISALCIRWYPKDQKKVPTKQKRHRALDDIRESIEELKYYK 887
Query: 240 ENIFK 244
NIFK
Sbjct: 888 ANIFK 892
>gi|449448848|ref|XP_004142177.1| PREDICTED: oligoribonuclease-like [Cucumis sativus]
gi|449503429|ref|XP_004161998.1| PREDICTED: oligoribonuclease-like [Cucumis sativus]
Length = 253
Score = 335 bits (860), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 171/253 (67%), Positives = 199/253 (78%), Gaps = 7/253 (2%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSS---SSSSSSCKSVESKSKANSSSN-LTLENQ 56
M L NAFS+LELDA+D Q+ PA ++SS ++ S + + K + N S + LT E Q
Sbjct: 3 MKPLVNAFSLLELDAEDDQI--PALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60
Query: 57 QNSQ-TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTK 115
+ Q + +YK PLVWIDLEMTGL +E DRILEIACIIT+G LTK VEGPDLVIHQ+K
Sbjct: 61 KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK 120
Query: 116 ECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVD 175
ECLD MGEWCQ+HH ASGLTKKVL S ++EREAEKQV++FVKK+V T LAGNSVY+D
Sbjct: 121 ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD 180
Query: 176 FMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMEL 235
F+FLKKYMPDLA LFSHVLVDVSSIK LC RWYPRD +K P KE KHRA+DDIRESIMEL
Sbjct: 181 FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL 240
Query: 236 KYYKENIFKTNLK 248
KYYKENIFK + K
Sbjct: 241 KYYKENIFKNSKK 253
>gi|356501364|ref|XP_003519495.1| PREDICTED: oligoribonuclease-like [Glycine max]
Length = 241
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/253 (67%), Positives = 198/253 (78%), Gaps = 16/253 (6%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M+ L+N+FSVLELDADDS V T A SS ++ V KS+ +QN +
Sbjct: 1 MEKLANSFSVLELDADDSHVPT-TAGSSDKRVNADIDIVPGKSE-----------KQNLE 48
Query: 61 TPL--EFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECL 118
P+ EYK+PLVWIDLEMTGL IEVDRILEIACIITDG LTK+VEGPDLVIHQTKECL
Sbjct: 49 NPVTSSCEYKLPLVWIDLEMTGLNIEVDRILEIACIITDGNLTKTVEGPDLVIHQTKECL 108
Query: 119 DSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKK--NVGTYTPLLAGNSVYVDF 176
D MGEWCQ+HH ASGLTKKVL S ++E EAEKQV+EFVK+ NVG YTPLLAG+S+YVDF
Sbjct: 109 DRMGEWCQSHHAASGLTKKVLKSTISEGEAEKQVIEFVKRYVNVGLYTPLLAGSSIYVDF 168
Query: 177 MFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELK 236
FLKKYMP LASLFSHV+VDVSS+KALC+RWYP+D + PSK + HRALDDIRESI EL+
Sbjct: 169 QFLKKYMPKLASLFSHVVVDVSSVKALCIRWYPKDKERAPSKLKTHRALDDIRESIEELR 228
Query: 237 YYKENIFKTNLKK 249
YYK NIFK +K
Sbjct: 229 YYKANIFKPRSRK 241
>gi|224120530|ref|XP_002330965.1| predicted protein [Populus trichocarpa]
gi|222872757|gb|EEF09888.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/249 (67%), Positives = 191/249 (76%), Gaps = 30/249 (12%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M+ LSNAFS+LE+DA+D +V +++ S SS++
Sbjct: 1 MNLLSNAFSLLEVDAEDDRVNIASSSKSKSSNNREV------------------------ 36
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
YKMPLVWIDLEMTGL EVDRILEIACIITDG LTKSVEGPDLVIHQ+KECLD
Sbjct: 37 ------YKMPLVWIDLEMTGLNTEVDRILEIACIITDGYLTKSVEGPDLVIHQSKECLDR 90
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
MGEWCQ+HH ASGLT KVL S +TER+AEKQV+EFVK++VGT+TPL+AGNSVYVDF+FLK
Sbjct: 91 MGEWCQSHHAASGLTNKVLGSKITERDAEKQVIEFVKRHVGTHTPLIAGNSVYVDFLFLK 150
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMPDLA LFSHV+VDVSS+ ALCMRWYP+D RK P KE KHRALDDIRESI ELKYYKE
Sbjct: 151 KYMPDLAGLFSHVVVDVSSVMALCMRWYPQDRRKAPQKENKHRALDDIRESIRELKYYKE 210
Query: 241 NIFKTNLKK 249
N+FK KK
Sbjct: 211 NMFKPKSKK 219
>gi|297825941|ref|XP_002880853.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
gi|297326692|gb|EFH57112.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
Length = 223
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/245 (62%), Positives = 185/245 (75%), Gaps = 24/245 (9%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M+ LSNAFS+L +D+ P A+SSSS+ K N +LE+
Sbjct: 1 MNKLSNAFSLLAFADEDA----PMASSSSSTG-----------KQEERVNGSLEDG---- 41
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
+YK PLVWIDLEMTGL +EVDRILEIACIITDG LTKSVEGPDLV+HQTK+CLD
Sbjct: 42 -----DYKQPLVWIDLEMTGLNVEVDRILEIACIITDGNLTKSVEGPDLVVHQTKDCLDK 96
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
MGEWCQ HH SGLTKKV S ++EREAE++V+EFV+K+VG+ PLLAGNSVYVDF+FLK
Sbjct: 97 MGEWCQTHHGDSGLTKKVRLSTISEREAEQKVIEFVRKHVGSENPLLAGNSVYVDFLFLK 156
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMP+LA+LF H+LVDVSS+KALC RW+P + R+ P+K+ HRA+DDIRESI ELKYYK+
Sbjct: 157 KYMPELAALFPHILVDVSSVKALCSRWFPIEKRRAPAKKNNHRAMDDIRESIKELKYYKK 216
Query: 241 NIFKT 245
IFK
Sbjct: 217 TIFKA 221
>gi|30683321|ref|NP_850090.1| oligoribonuclease [Arabidopsis thaliana]
gi|83305201|sp|Q9ZVE0.2|ORN_ARATH RecName: Full=Oligoribonuclease
gi|17381150|gb|AAL36387.1| unknown protein [Arabidopsis thaliana]
gi|25054981|gb|AAN71962.1| unknown protein [Arabidopsis thaliana]
gi|330252818|gb|AEC07912.1| oligoribonuclease [Arabidopsis thaliana]
Length = 222
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/245 (62%), Positives = 185/245 (75%), Gaps = 25/245 (10%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M+ LSNAFSVL +D+ P A+SSS+ K S N +LE+
Sbjct: 1 MNKLSNAFSVLAFADEDA----PMASSSSTG------------KQEESVNGSLEDG---- 40
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
+YK PLVWIDLEMTGL +EVDRILEIACIIT+G LT+SVEGPDLV+ QTK+CLD
Sbjct: 41 -----DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDK 95
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
M +WCQ HH ASGLTKKVL S +TEREAE++V+EFVKK+VG+ PLLAGNSVYVDF+FLK
Sbjct: 96 MDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLFLK 155
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMP+LA+LF H+LVDVSS+KALC RW+P + RK P+K+ HRA+DDIRESI ELKYYK+
Sbjct: 156 KYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYYKK 215
Query: 241 NIFKT 245
IFK
Sbjct: 216 TIFKA 220
>gi|79323145|ref|NP_001031426.1| oligoribonuclease [Arabidopsis thaliana]
gi|222423704|dbj|BAH19818.1| AT2G26970 [Arabidopsis thaliana]
gi|330252819|gb|AEC07913.1| oligoribonuclease [Arabidopsis thaliana]
Length = 218
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/245 (62%), Positives = 184/245 (75%), Gaps = 29/245 (11%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M+ LSNAFSVL +D+ P A+SSS+ S N +LE+
Sbjct: 1 MNKLSNAFSVLAFADEDA----PMASSSSTESV----------------NGSLEDG---- 36
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
+YK PLVWIDLEMTGL +EVDRILEIACIIT+G LT+SVEGPDLV+ QTK+CLD
Sbjct: 37 -----DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDK 91
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
M +WCQ HH ASGLTKKVL S +TEREAE++V+EFVKK+VG+ PLLAGNSVYVDF+FLK
Sbjct: 92 MDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLFLK 151
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMP+LA+LF H+LVDVSS+KALC RW+P + RK P+K+ HRA+DDIRESI ELKYYK+
Sbjct: 152 KYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYYKK 211
Query: 241 NIFKT 245
IFK
Sbjct: 212 TIFKA 216
>gi|242064994|ref|XP_002453786.1| hypothetical protein SORBIDRAFT_04g017420 [Sorghum bicolor]
gi|241933617|gb|EES06762.1| hypothetical protein SORBIDRAFT_04g017420 [Sorghum bicolor]
Length = 246
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/251 (57%), Positives = 187/251 (74%), Gaps = 25/251 (9%)
Query: 4 LSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPL 63
L N FS L LDA+D +V+ P A S+ ++ S +N+QN T +
Sbjct: 5 LGNMFSALCLDAEDDRVEVPQAPPSTDETAPSKPD---------------KNEQNDTTAV 49
Query: 64 EFE----------YKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQ 113
++E Y+MPLVWIDLEMTGL I DRILEIACIITDGKLTK +EGPDLVI Q
Sbjct: 50 KYEEAALVSSSGDYRMPLVWIDLEMTGLDITKDRILEIACIITDGKLTKQIEGPDLVIGQ 109
Query: 114 TKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVY 173
+K+CLD+MGEWC+ HH ASGLT++VL S L+E +AE +V++FV+K++ + TPLLAGNSVY
Sbjct: 110 SKDCLDNMGEWCKTHHAASGLTERVLQSELSEHDAEAKVLDFVRKHINSGTPLLAGNSVY 169
Query: 174 VDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIM 233
VD +FLKKYMP LA++FSHV+VDVSSI ALC+RWYP++ ++ P K++ HRA+DDI+ESI
Sbjct: 170 VDLLFLKKYMPQLAAVFSHVIVDVSSIMALCVRWYPKERKQTPRKQKTHRAMDDIKESIA 229
Query: 234 ELKYYKENIFK 244
ELKYYK+NIFK
Sbjct: 230 ELKYYKDNIFK 240
>gi|195651097|gb|ACG45016.1| oligoribonuclease [Zea mays]
Length = 249
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/254 (58%), Positives = 188/254 (74%), Gaps = 21/254 (8%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M L+N FS L LDA+ ++ A +SSS+ K+ SK +NQQN
Sbjct: 1 MSKLANMFSALCLDAESNE--DVGRAEVPQASSSTDKTAASKPD---------KNQQNDT 49
Query: 61 TPLEFE----------YKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLV 110
T + +E Y+MPLVWIDLEMTGL I DRILEIACIITDGKLTK +EGPDLV
Sbjct: 50 TAVNYEEAALVSSSSDYRMPLVWIDLEMTGLDITKDRILEIACIITDGKLTKQIEGPDLV 109
Query: 111 IHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGN 170
I Q+K+CLD+M EWC+ HH ASGLT++VL S L+E +AE +V++FV+K++ + TPLLAGN
Sbjct: 110 ISQSKDCLDNMDEWCKTHHAASGLTERVLQSELSEHDAEAKVLDFVRKHINSVTPLLAGN 169
Query: 171 SVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRE 230
SVYVDF+FLKKYMP LA++FSHV+VDVSSI ALC+RWYP++ ++ P K++ HRA+DDI+E
Sbjct: 170 SVYVDFLFLKKYMPQLAAVFSHVIVDVSSIMALCIRWYPKERKQTPRKQKTHRAMDDIKE 229
Query: 231 SIMELKYYKENIFK 244
SI ELKYYK NIFK
Sbjct: 230 SIAELKYYKHNIFK 243
>gi|212721064|ref|NP_001131502.1| uncharacterized protein LOC100192839 [Zea mays]
gi|194691708|gb|ACF79938.1| unknown [Zea mays]
gi|413936871|gb|AFW71422.1| oligoribonuclease isoform 1 [Zea mays]
gi|413936872|gb|AFW71423.1| oligoribonuclease isoform 2 [Zea mays]
Length = 249
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/245 (59%), Positives = 188/245 (76%), Gaps = 3/245 (1%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLEN-QQNS 59
M L+N FS L LDA+ ++ A +SSS+ K+ SK N ++ T N ++ +
Sbjct: 1 MSKLANMFSALCLDAESNE--DVGRAEVPQASSSTDKTAASKPDKNEQNDTTAVNYEEAA 58
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
+Y+MPLVWIDLEMTGL I DRILEIACIITDGKLTK +EGPDLVI Q+K+CLD
Sbjct: 59 LVSSSSDYRMPLVWIDLEMTGLDITKDRILEIACIITDGKLTKQIEGPDLVISQSKDCLD 118
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFL 179
+M EWC+ HH ASGLT++VL S L+E +AE +V++FV+K++ + TPLLAGNSVYVDF+FL
Sbjct: 119 NMDEWCKTHHAASGLTERVLQSELSEHDAEAKVLDFVRKHINSGTPLLAGNSVYVDFLFL 178
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
KKYMP LA++FSHV+VDVSSI ALC+RWYP++ ++ P K++ HRA+DDI+ESI ELKYYK
Sbjct: 179 KKYMPQLAAVFSHVIVDVSSIMALCIRWYPKERKQTPRKQKTHRAMDDIKESIAELKYYK 238
Query: 240 ENIFK 244
NIFK
Sbjct: 239 HNIFK 243
>gi|357148958|ref|XP_003574951.1| PREDICTED: oligoribonuclease-like [Brachypodium distachyon]
Length = 247
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/244 (56%), Positives = 187/244 (76%), Gaps = 3/244 (1%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M L+NAFS+L LD +D + +S+S ++ + K +++ + + +
Sbjct: 1 MSKLANAFSLLNLDGEDDDEEEEVTKTSTSIEETAANKADKGVKNDTT---VVNYNEGTL 57
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
Y+MPLVWIDLEMTGL I DRILEIACIITDGKLTK +EGPDLVI+Q+K+CLD+
Sbjct: 58 ASSSGGYRMPLVWIDLEMTGLDISKDRILEIACIITDGKLTKQIEGPDLVINQSKDCLDN 117
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
MGEWC+ HH +SGLT++VL S ++E +AEKQV++F+ ++VG+ TPL+AGNSVYVD +FLK
Sbjct: 118 MGEWCKTHHASSGLTERVLQSEISEHDAEKQVLDFLMRHVGSGTPLIAGNSVYVDLLFLK 177
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMP LA++FSHV+VDVSSI ALC+RWYP++ ++ P KE+ HRA+DDI+ESI ELKYYK+
Sbjct: 178 KYMPQLAAIFSHVIVDVSSIMALCIRWYPKERKQTPRKEKTHRAMDDIKESIAELKYYKD 237
Query: 241 NIFK 244
NIFK
Sbjct: 238 NIFK 241
>gi|3885327|gb|AAC77855.1| hypothetical protein [Arabidopsis thaliana]
Length = 227
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 158/179 (88%)
Query: 66 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWC 125
+YK PLVWIDLEMTGL +EVDRILEIACIIT+G LT+SVEGPDLV+ QTK+CLD M +WC
Sbjct: 22 DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDKMDDWC 81
Query: 126 QNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPD 185
Q HH ASGLTKKVL S +TEREAE++V+EFVKK+VG+ PLLAGNSVYVDF+FLKKYMP+
Sbjct: 82 QTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLFLKKYMPE 141
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
LA+LF H+LVDVSS+KALC RW+P + RK P+K+ HRA+DDIRESI ELKYYK+ IFK
Sbjct: 142 LAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYYKKTIFK 200
>gi|38344589|emb|CAD40497.2| OSJNBa0079M09.9 [Oryza sativa Japonica Group]
gi|116308941|emb|CAH66068.1| OSIGBa0092O07.3 [Oryza sativa Indica Group]
gi|116309117|emb|CAH66222.1| OSIGBa0157N01.8 [Oryza sativa Indica Group]
Length = 249
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 183/249 (73%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M L+N FSVL LDA+D + + +SS + +++ S K + + + + +
Sbjct: 1 MSKLANMFSVLNLDAEDDREEGAEPPTSSKAEAAAVTSSTEIDKIRLNHTMIVNHDGENL 60
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
+Y PLVWIDLEMTGL I DRILEIACIITDGKLTK +EGPDLVI Q+KEC++
Sbjct: 61 ASSSSDYDKPLVWIDLEMTGLDITKDRILEIACIITDGKLTKRIEGPDLVIRQSKECVND 120
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
M EWC+ HH ASGL +KVL S ++E +AEKQV++F++K +G+ TPL+AGNSVY+D +FLK
Sbjct: 121 MNEWCKVHHSASGLKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAGNSVYMDLLFLK 180
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMP LA++FSHV+VDVSSI ALC RW+P++ + P KE+ HRA+DDIRESI EL+YYKE
Sbjct: 181 KYMPHLAAIFSHVIVDVSSISALCSRWFPKERKHAPRKEKNHRAMDDIRESIKELQYYKE 240
Query: 241 NIFKTNLKK 249
NIFK+ K
Sbjct: 241 NIFKSRKSK 249
>gi|218190704|gb|EEC73131.1| hypothetical protein OsI_07145 [Oryza sativa Indica Group]
Length = 247
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/249 (57%), Positives = 184/249 (73%), Gaps = 13/249 (5%)
Query: 1 MDGLSNAFSVLELD-----ADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLEN 55
M L+N F VL LD ADD++ + +SSS K ++ A S + L L
Sbjct: 1 MSELANKFLVLHLDGEGGGADDTE-------EALIQTSSSIKEADAGENALSDT-LVLNY 52
Query: 56 QQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTK 115
+ S +Y+MPLVWIDLEMTGL + DRILEIACIITDGKLTK +EGPDLVI+Q K
Sbjct: 53 DEGSLVSSSGDYQMPLVWIDLEMTGLDVAKDRILEIACIITDGKLTKQIEGPDLVINQKK 112
Query: 116 ECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVD 175
+ LD+M EWC+ HH ASGLT++VL S ++E +AE QV++FVKK+VG+ PL+AGNSVYVD
Sbjct: 113 DLLDNMDEWCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVGSSPPLIAGNSVYVD 172
Query: 176 FMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMEL 235
+FLK YMP LA++FSHV+VDVSSI ALC+RWYP++ ++ P K +KHRA++DI+ESI EL
Sbjct: 173 LLFLKNYMPQLAAIFSHVIVDVSSIMALCIRWYPKERKRTPQKGKKHRAMNDIKESIAEL 232
Query: 236 KYYKENIFK 244
KYYK+NIFK
Sbjct: 233 KYYKDNIFK 241
>gi|222622820|gb|EEE56952.1| hypothetical protein OsJ_06659 [Oryza sativa Japonica Group]
Length = 348
Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/249 (57%), Positives = 184/249 (73%), Gaps = 13/249 (5%)
Query: 1 MDGLSNAFSVLELD-----ADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLEN 55
M L+N F VL LD ADD++ + +SSS K ++ A S + L L
Sbjct: 102 MSELANKFLVLHLDGEGGGADDTE-------EALIQTSSSIKEADAGENALSDT-LVLNY 153
Query: 56 QQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTK 115
+ S +Y+MPLVWIDLEMTGL + DRILEIACIITDGKLTK +EGPDLVI+Q K
Sbjct: 154 DEGSLVSSSGDYQMPLVWIDLEMTGLDVAKDRILEIACIITDGKLTKQIEGPDLVINQKK 213
Query: 116 ECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVD 175
+ LD+M EWC+ HH ASGLT++VL S ++E +AE QV++FVKK+VG+ PL+AGNSVYVD
Sbjct: 214 DLLDNMDEWCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVGSSPPLIAGNSVYVD 273
Query: 176 FMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMEL 235
+FLK YMP LA++FSHV+VDVSSI ALC+RWYP++ ++ P K +KHRA++DI+ESI EL
Sbjct: 274 LLFLKNYMPQLAAIFSHVIVDVSSIMALCIRWYPKERKRTPQKGKKHRAMNDIKESIAEL 333
Query: 236 KYYKENIFK 244
KYY++NIFK
Sbjct: 334 KYYEDNIFK 342
>gi|115446061|ref|NP_001046810.1| Os02g0465500 [Oryza sativa Japonica Group]
gi|47496882|dbj|BAD19846.1| putative oligoribonuclease [Oryza sativa Japonica Group]
gi|47497504|dbj|BAD19557.1| putative oligoribonuclease [Oryza sativa Japonica Group]
gi|113536341|dbj|BAF08724.1| Os02g0465500 [Oryza sativa Japonica Group]
gi|215687346|dbj|BAG91911.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/249 (57%), Positives = 184/249 (73%), Gaps = 13/249 (5%)
Query: 1 MDGLSNAFSVLELD-----ADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLEN 55
M L+N F VL LD ADD++ + +SSS K ++ A S + L L
Sbjct: 1 MSELANKFLVLHLDGEGGGADDTE-------EALIQTSSSIKEADAGENALSDT-LVLNY 52
Query: 56 QQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTK 115
+ S +Y+MPLVWIDLEMTGL + DRILEIACIITDGKLTK +EGPDLVI+Q K
Sbjct: 53 DEGSLVSSSGDYQMPLVWIDLEMTGLDVAKDRILEIACIITDGKLTKQIEGPDLVINQKK 112
Query: 116 ECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVD 175
+ LD+M EWC+ HH ASGLT++VL S ++E +AE QV++FVKK+VG+ PL+AGNSVYVD
Sbjct: 113 DLLDNMDEWCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVGSSPPLIAGNSVYVD 172
Query: 176 FMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMEL 235
+FLK YMP LA++FSHV+VDVSSI ALC+RWYP++ ++ P K +KHRA++DI+ESI EL
Sbjct: 173 LLFLKNYMPQLAAIFSHVIVDVSSIMALCIRWYPKERKRTPQKGKKHRAMNDIKESIAEL 232
Query: 236 KYYKENIFK 244
KYY++NIFK
Sbjct: 233 KYYEDNIFK 241
>gi|326527927|dbj|BAJ89015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/258 (53%), Positives = 184/258 (71%), Gaps = 9/258 (3%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M L+N F+VL+LD +D + + S+ ++++ + ++ + + +
Sbjct: 1 MANLANMFAVLDLDGEDDRKEVEQQTSTKPEAAAAAAAARKLDTGMVNNKMIVNYDGDKL 60
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
EYKMPLVWIDLEMTGL I DRILEIACIITDGKLTK +EGPDLVI Q+KECLD+
Sbjct: 61 GSSSSEYKMPLVWIDLEMTGLDIRKDRILEIACIITDGKLTKRIEGPDLVIRQSKECLDN 120
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEK---------QVVEFVKKNVGTYTPLLAGNS 171
M EWC+ HH ASGLT++V S ++E +AEK QV++FV++ +G+ TPL+AGNS
Sbjct: 121 MNEWCKTHHGASGLTEQVQQSDISECDAEKQTHCYLQTCQVLDFVRRYIGSATPLIAGNS 180
Query: 172 VYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRES 231
+Y D +FLK+YMP LA +F HV+VDVSSI ALC+RW+P++ ++ P KE+ HRALDDIRES
Sbjct: 181 IYTDLLFLKEYMPQLAGIFPHVIVDVSSITALCIRWFPKERKQAPRKEKNHRALDDIRES 240
Query: 232 IMELKYYKENIFKTNLKK 249
IMEL+YYKENIFK+ K
Sbjct: 241 IMELQYYKENIFKSRQSK 258
>gi|357167539|ref|XP_003581212.1| PREDICTED: oligoribonuclease-like isoform 1 [Brachypodium
distachyon]
Length = 247
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/250 (57%), Positives = 186/250 (74%), Gaps = 5/250 (2%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVES-KSKANSSSNLTLENQQNS 59
M L+N F+VL+LDA+D + + SS +++ + ++S + N +N +S
Sbjct: 1 MTNLANMFAVLDLDAEDDREEAEEQPISSKLEAAAARELDSGRENHKMIVNYDGDNLASS 60
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
+ EYKMPLVWIDLEMTGL I DRILEIACIITDGKLTK VEGPDLVI Q+KECLD
Sbjct: 61 SS----EYKMPLVWIDLEMTGLDITKDRILEIACIITDGKLTKRVEGPDLVIRQSKECLD 116
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFL 179
M EWC+ HH ASGLT+KVL S ++E +AEKQV++FV++ +G+ TPL+AGNS+Y D +FL
Sbjct: 117 DMNEWCKIHHGASGLTEKVLQSDISEHDAEKQVLDFVRRYIGSATPLIAGNSIYTDLLFL 176
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
K+YMP LA +F HV+VDVSSI ALC+RW+P++ ++ P KE+ HRA DDIRESI EL+YYK
Sbjct: 177 KEYMPQLAGIFPHVIVDVSSITALCIRWFPKEKKQAPRKEKNHRARDDIRESIKELQYYK 236
Query: 240 ENIFKTNLKK 249
NIFK+ K
Sbjct: 237 MNIFKSRQSK 246
>gi|255549210|ref|XP_002515659.1| oligoribonuclease, mitochondrial, putative [Ricinus communis]
gi|223545202|gb|EEF46711.1| oligoribonuclease, mitochondrial, putative [Ricinus communis]
Length = 232
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 174/213 (81%), Gaps = 3/213 (1%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
MD L+NAFSVLELDA+D QV ++S + +++ ++ S+S L + N + ++
Sbjct: 1 MDHLTNAFSVLELDAEDIQVDAFTSSSIAKPFTANNAGNNRSNENESASTLMVRNGRQNE 60
Query: 61 TPL---EFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKEC 117
L EY MPLVWID+EMTGL IEVDR+LEIACIITDG LTKSVEGPDLVIHQ+KEC
Sbjct: 61 KDLVTCSVEYNMPLVWIDMEMTGLNIEVDRVLEIACIITDGNLTKSVEGPDLVIHQSKEC 120
Query: 118 LDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFM 177
L+ MGEWCQ+HH ASGLT+KVL S ++EREAE QV+EFVK++VGTYTPLLAGNSVYVDF+
Sbjct: 121 LEQMGEWCQSHHAASGLTEKVLQSTVSEREAETQVIEFVKRHVGTYTPLLAGNSVYVDFL 180
Query: 178 FLKKYMPDLASLFSHVLVDVSSIKALCMRWYPR 210
FLKKYMPDLASLFSHV+VDVSS+KALC+RWYPR
Sbjct: 181 FLKKYMPDLASLFSHVVVDVSSVKALCIRWYPR 213
>gi|357167541|ref|XP_003581213.1| PREDICTED: oligoribonuclease-like isoform 2 [Brachypodium
distachyon]
Length = 255
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 186/258 (72%), Gaps = 13/258 (5%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVES-KSKANSSSNLTLENQQNS 59
M L+N F+VL+LDA+D + + SS +++ + ++S + N +N +S
Sbjct: 1 MTNLANMFAVLDLDAEDDREEAEEQPISSKLEAAAARELDSGRENHKMIVNYDGDNLASS 60
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
+ EYKMPLVWIDLEMTGL I DRILEIACIITDGKLTK VEGPDLVI Q+KECLD
Sbjct: 61 SS----EYKMPLVWIDLEMTGLDITKDRILEIACIITDGKLTKRVEGPDLVIRQSKECLD 116
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEK--------QVVEFVKKNVGTYTPLLAGNS 171
M EWC+ HH ASGLT+KVL S ++E +AEK QV++FV++ +G+ TPL+AGNS
Sbjct: 117 DMNEWCKIHHGASGLTEKVLQSDISEHDAEKQVSCVSYFQVLDFVRRYIGSATPLIAGNS 176
Query: 172 VYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRES 231
+Y D +FLK+YMP LA +F HV+VDVSSI ALC+RW+P++ ++ P KE+ HRA DDIRES
Sbjct: 177 IYTDLLFLKEYMPQLAGIFPHVIVDVSSITALCIRWFPKEKKQAPRKEKNHRARDDIRES 236
Query: 232 IMELKYYKENIFKTNLKK 249
I EL+YYK NIFK+ K
Sbjct: 237 IKELQYYKMNIFKSRQSK 254
>gi|302815434|ref|XP_002989398.1| hypothetical protein SELMODRAFT_229455 [Selaginella moellendorffii]
gi|300142792|gb|EFJ09489.1| hypothetical protein SELMODRAFT_229455 [Selaginella moellendorffii]
Length = 236
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/239 (54%), Positives = 158/239 (66%), Gaps = 9/239 (3%)
Query: 6 NAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEF 65
N FS L L D+ + SSS+ + + N SS T+ + S+
Sbjct: 4 NLFSALTLIDDEDDLDQLGRGGGGSSSARIPLPLGDAGRKNGSSLATIAGEFVSR----- 58
Query: 66 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWC 125
PLVWIDLEMTGL + DRILEIACIITDGKLTKS+EGP+LVIHQ+ E L MGEWC
Sbjct: 59 ----PLVWIDLEMTGLDVCKDRILEIACIITDGKLTKSIEGPNLVIHQSDEILKGMGEWC 114
Query: 126 QNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPD 185
Q HH ASGLT++V +S +TE AE V++FV+K LAGNSVY D FL+KYMP
Sbjct: 115 QTHHAASGLTERVQNSKVTEAHAEMLVLKFVQKYTIAGYAQLAGNSVYNDLNFLRKYMPT 174
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
LA+ SHV+VDVSSIK+LC RWYPRD + P K + HRALDDIRESI EL+Y+K IFK
Sbjct: 175 LAAHLSHVIVDVSSIKSLCKRWYPRDAERAPKKAKSHRALDDIRESIKELEYFKRTIFK 233
>gi|302758050|ref|XP_002962448.1| hypothetical protein SELMODRAFT_141141 [Selaginella moellendorffii]
gi|300169309|gb|EFJ35911.1| hypothetical protein SELMODRAFT_141141 [Selaginella moellendorffii]
Length = 236
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/239 (55%), Positives = 158/239 (66%), Gaps = 9/239 (3%)
Query: 6 NAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEF 65
N FS L L D+ + SSSS + + N SS T+ + S+
Sbjct: 4 NLFSALTLIDDEDDLGQLGGGGGGSSSSRIPLPLGDAGRKNGSSLATIAGEFVSR----- 58
Query: 66 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWC 125
PLVWIDLEMTGL + DRILEIACIITDGKLTKS+EGP+LVIHQ+ E L MGEWC
Sbjct: 59 ----PLVWIDLEMTGLDVCKDRILEIACIITDGKLTKSIEGPNLVIHQSDEILKGMGEWC 114
Query: 126 QNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPD 185
Q HH ASGLT++V +S +TE AE V++FV+K LAGNSVY D FL+KYMP
Sbjct: 115 QTHHAASGLTERVQNSKVTEAHAEMLVLKFVQKYTIAGYAQLAGNSVYNDLNFLRKYMPT 174
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
LA+ SHV+VDVSSIK+LC RWYPRD + P K + HRALDDIRESI EL+Y+K IFK
Sbjct: 175 LAAHLSHVIVDVSSIKSLCKRWYPRDAERAPKKAKSHRALDDIRESIKELEYFKRTIFK 233
>gi|168032166|ref|XP_001768590.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680089|gb|EDQ66528.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 180
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 142/179 (79%), Gaps = 2/179 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
+MPLVWIDLEM+GL IE DRILEIACI+TDGKL K VEGP +VI Q ++ L MGEWCQ
Sbjct: 2 QMPLVWIDLEMSGLDIEKDRILEIACIVTDGKLEKIVEGPVIVISQPEDVLQGMGEWCQE 61
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPD 185
HH ASGLT V S +TE +A+++V+EF++K+ + +LAGNS+YVD FLKKYMP
Sbjct: 62 HHAASGLTDSVRASTVTEDQAQQEVLEFLRKHTRGNSGQSMLAGNSIYVDLKFLKKYMPI 121
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
LA+ FS VLVDVSSI+ALC+RWYPR+ K P K+Q+HR+L+DI+ESI ELKY + +IFK
Sbjct: 122 LAAEFSPVLVDVSSIRALCVRWYPREAEKQPPKKQQHRSLEDIKESIAELKYLRRSIFK 180
>gi|168010065|ref|XP_001757725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691001|gb|EDQ77365.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 182
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 136/178 (76%), Gaps = 2/178 (1%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
MPLVWIDL M+GL IE DRILEIAC++TDG+L ++ EGPD+++ Q +E L+ M + H
Sbjct: 1 MPLVWIDLVMSGLDIEKDRILEIACVVTDGRLERTFEGPDIIVSQPEEILEGMDVSFREH 60
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDL 186
H ASGL V S +TE EAE++V++FV+K + PLLAGNSVYVD FL KYMP L
Sbjct: 61 HAASGLMDGVRASSVTEEEAEQEVLKFVRKYTRGNSGQPLLAGNSVYVDLRFLNKYMPTL 120
Query: 187 ASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
A+ FSHVLVDVSSI+ALC+RWYPR+ K P+K+ +HR+L DI+ESI ELKY + NIFK
Sbjct: 121 AAEFSHVLVDVSSIRALCVRWYPREAEKQPAKQLQHRSLADIKESIAELKYLRRNIFK 178
>gi|125547686|gb|EAY93508.1| hypothetical protein OsI_15303 [Oryza sativa Indica Group]
Length = 214
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 154/249 (61%), Gaps = 35/249 (14%)
Query: 1 MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQ 60
M L+N FSVL LDA+D + + +SS + +++ S K + + + + +
Sbjct: 1 MSKLANMFSVLNLDAEDDREEGAEPPTSSKAEAAAVTSSTETDKIRLNHTMIVNHDGENL 60
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
+Y PLVWIDLEMTGL I DRILEIACIITDG
Sbjct: 61 ASSSSDYDKPLVWIDLEMTGLDITKDRILEIACIITDG---------------------- 98
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
L +KVL S ++E +AEKQV++F++K +G+ TPL+AGNSVY+D +FLK
Sbjct: 99 -------------LKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAGNSVYMDLLFLK 145
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMP LA++FSHV+VDVSSI ALC RW+P++ + P KE+ HRA+DDIRESI EL+YYKE
Sbjct: 146 KYMPHLAAIFSHVIVDVSSISALCSRWFPKERKHAPRKEKNHRAMDDIRESIKELQYYKE 205
Query: 241 NIFKTNLKK 249
NIFK+ K
Sbjct: 206 NIFKSRKSK 214
>gi|302848573|ref|XP_002955818.1| hypothetical protein VOLCADRAFT_66302 [Volvox carteri f.
nagariensis]
gi|300258786|gb|EFJ43019.1| hypothetical protein VOLCADRAFT_66302 [Volvox carteri f.
nagariensis]
Length = 196
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%)
Query: 64 EFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGE 123
E + + PLVW+DLEMTGL IE D I+E+ACIITDG L V GP IH + LD+M
Sbjct: 12 ELKLRNPLVWVDLEMTGLDIERDTIIEVACIITDGDLKHEVLGPATAIHADDDVLDNMNA 71
Query: 124 WCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYM 183
WC+ HH SGLT++V + +T +AE +++ F+ + LAGNS++VD MFL KYM
Sbjct: 72 WCKEHHGKSGLTQRVRETHVTMAQAEDELLAFISGHTTENMAQLAGNSIHVDRMFLLKYM 131
Query: 184 PDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
P + + ++ +VDVSSIK L RWYP+ Y+ P K+ H AL DIRESI ELKYY++ +F
Sbjct: 132 PRVVAYLNYRIVDVSSIKELARRWYPKAYKNAPRKKLAHTALSDIRESIEELKYYRKTVF 191
Query: 244 KTNLK 248
+T K
Sbjct: 192 RTPTK 196
>gi|410914582|ref|XP_003970766.1| PREDICTED: oligoribonuclease, mitochondrial-like [Takifugu
rubripes]
Length = 242
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 122/174 (70%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL I+ D+I+E+AC+ITD L EGP+L+I+Q E LD M EWC HH
Sbjct: 53 LVWVDLEMTGLDIDKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDGMSEWCIEHHG 112
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V HS +T +AE + + FV+++ LAGNSV+ D FL+KYMP
Sbjct: 113 KSGLTQAVRHSKITLEQAEYEFLSFVRQHTPPGQCPLAGNSVHADKRFLEKYMPQFMYHL 172
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK LC RW+P +Y+KVP K+ HRAL DI+ESI EL++YK +IFK
Sbjct: 173 HYRIVDVSTIKELCRRWFPEEYKKVPHKQATHRALSDIKESIKELQFYKSSIFK 226
>gi|395520254|ref|XP_003764250.1| PREDICTED: oligoribonuclease, mitochondrial [Sarcophilus harrisii]
Length = 236
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 119/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I+Q E LDSM EWC+ HH
Sbjct: 42 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDSMSEWCKEHHG 101
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 102 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 161
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K LC RWYP +Y VP K HRALDDI ESI EL++Y+ NIFK
Sbjct: 162 HYRIIDVSTVKELCRRWYPEEYEFVPKKAASHRALDDISESIKELQFYRNNIFK 215
>gi|334329798|ref|XP_001381185.2| PREDICTED: oligoribonuclease, mitochondrial-like [Monodelphis
domestica]
Length = 236
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 119/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I+Q E LDSM EWC+ HH
Sbjct: 42 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDSMSEWCKEHHG 101
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 102 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 161
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K LC RWYP +Y VP K HRALDDI ESI EL++Y+ NIFK
Sbjct: 162 HYRIIDVSTVKELCRRWYPEEYEFVPKKAASHRALDDISESIKELQFYRNNIFK 215
>gi|432896140|ref|XP_004076278.1| PREDICTED: oligoribonuclease, mitochondrial-like [Oryzias latipes]
Length = 274
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 124/174 (71%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+ACIITD L VEGP+L+I Q + LD M +WC+ HH
Sbjct: 82 MVWVDLEMTGLDIEKDQIIEMACIITDSDLNILVEGPNLIIKQPDKLLDEMSDWCKEHHG 141
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S ++ ++AE + + F++++ LAGNSV+ D FL+KYMP L
Sbjct: 142 KSGLTQAVRESKISLQQAEYEFLSFIRQHTPPGQCPLAGNSVHADKKFLEKYMPQLMHHL 201
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS+IK LC RW+P +Y+ VP K+ HRALDDI+ESI ELK+Y+ NIFK
Sbjct: 202 HYRIIDVSTIKELCRRWFPEEYKMVPYKKASHRALDDIQESIKELKFYRANIFK 255
>gi|262198353|ref|YP_003269562.1| exonuclease RNase T and DNA polymerase III [Haliangium ochraceum
DSM 14365]
gi|262081700|gb|ACY17669.1| Exonuclease RNase T and DNA polymerase III [Haliangium ochraceum
DSM 14365]
Length = 187
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 122/176 (69%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K PL+W+DLEMTGL E +RI+EIA +ITD L EGPDLV+HQ + L+ M +W +
Sbjct: 4 KNPLIWMDLEMTGLDPERERIIEIAVLITDNALEIVAEGPDLVVHQPESLLEQMDDWNRK 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
HH ASGLT++V S ++E EAE QV+ F++++V LAGNS++ D FL++YMP +
Sbjct: 64 HHGASGLTERVRASQVSEAEAEAQVLAFLREHVKQGAAPLAGNSIHQDRRFLRRYMPQID 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSS+K L RWYP Y K PSK HRALDDIRES+ EL+YY++ +F
Sbjct: 124 DYLHYRNVDVSSVKELVKRWYPAVYSKRPSKVGTHRALDDIRESVAELRYYRDQVF 179
>gi|91093385|ref|XP_971552.1| PREDICTED: similar to AGAP012804-PA [Tribolium castaneum]
gi|270015360|gb|EFA11808.1| hypothetical protein TcasGA2_TC008587 [Tribolium castaneum]
Length = 211
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 119/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D+EMTGL + D+I+E+ACIITDG L EGPDL+IH + LD M EWC+ HH
Sbjct: 36 VVWVDMEMTGLDVATDKIMEVACIITDGDLNIIAEGPDLIIHHPQNILDKMNEWCKTHHS 95
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL++ L S ++ EA+ ++++FV + V LAGNSVY+D +FL+KYMP L
Sbjct: 96 KSGLSEACLKSKISVEEAQDKLMDFVAEYVTEKVSPLAGNSVYMDRLFLRKYMPRLHEYL 155
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K LC RW P Y++ P K HRAL DI+ESI ELKYYK FK
Sbjct: 156 HYRIIDVSTVKELCRRWNPDVYKEAPKKAFSHRALSDIKESIEELKYYKSRFFK 209
>gi|50760099|ref|XP_417900.1| PREDICTED: oligoribonuclease, mitochondrial [Gallus gallus]
Length = 233
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 119/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL +E D+ILE+AC+ITD L EGP+L+I Q E LDSM EWC+ HH
Sbjct: 39 MVWVDLEMTGLDVEKDQILEMACLITDSDLNVLAEGPNLIIKQPDELLDSMSEWCKEHHG 98
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S ++ ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 99 KSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMRHL 158
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K LC RWYP +Y P K HRALDDIRESI EL++Y+++IFK
Sbjct: 159 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDIRESIKELQFYRDSIFK 212
>gi|359319460|ref|XP_546513.4| PREDICTED: LOW QUALITY PROTEIN: oligoribonuclease, mitochondrial
[Canis lupus familiaris]
Length = 237
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTXQQAEYEFLSFVRQQTSPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|354494487|ref|XP_003509368.1| PREDICTED: oligoribonuclease, mitochondrial-like [Cricetulus
griseus]
gi|344237165|gb|EGV93268.1| Oligoribonuclease, mitochondrial [Cricetulus griseus]
Length = 237
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|357630731|gb|EHJ78664.1| oligoribonuclease, mitochondrial [Danaus plexippus]
Length = 194
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 123/176 (69%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWIDLEMTGL +E D ILEIAC++TD L GP+++IHQ E L++M +WC H
Sbjct: 16 IVWIDLEMTGLNVEKDHILEIACLVTDEHLNIVSTGPNIIIHQDDEVLNNMNQWCVTQHG 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ S +T +AE ++ FVK +V L GNSVY+D +FL+KYMP L +
Sbjct: 76 ESGLTEACRKSQITLTKAENDILNFVKSHVPEKLCPLGGNSVYMDRLFLQKYMPKLNNYL 135
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RW+P++Y ++P+K+ +HR L+DI+ES+ ELKYY+ NIFK N
Sbjct: 136 HYRIIDVSTIKELAKRWFPKEYSRIPTKKFEHRCLNDIKESVEELKYYRNNIFKVN 191
>gi|148225871|ref|NP_001088822.1| REX2, RNA exonuclease 2 homolog [Xenopus laevis]
gi|126631799|gb|AAI33811.1| LOC496097 protein [Xenopus laevis]
Length = 186
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 120/175 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D I+E+AC+ITD L EGP+L+I Q E LD M +WC+ HH
Sbjct: 9 MVWVDLEMTGLDIEKDEIIEMACLITDSNLDILAEGPNLIIKQPDELLDGMSDWCKEHHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S +T ++AE + + F++++ LAGNSV+ D FL KYMP
Sbjct: 69 KSGLTQAVRESRITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHADKKFLDKYMPRFMRHL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ ++DVS++K LC RW+P +YR P K HRALDDIRESI EL++Y+E+IFKT
Sbjct: 129 HYRIIDVSTVKELCRRWHPVEYRLAPKKAASHRALDDIRESIKELQFYRESIFKT 183
>gi|384251560|gb|EIE25037.1| ribonuclease H-like protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 187
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 124/176 (70%), Gaps = 1/176 (0%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVW+DLEMTGL +E D I+E AC+++DG L ++EGP++ I Q++ L SM WC +HH
Sbjct: 2 PLVWLDLEMTGLDLENDTIIEAACLMSDGNLETTIEGPEIAIQQSEAVLASMNPWCIDHH 61
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
ASGLT++ S ++ +AE+Q++EFV ++ LAGNSV+VD FL++ MP L +
Sbjct: 62 GASGLTQRCRESTVSIEQAEEQLLEFVGRHTEPGEARLAGNSVHVDMQFLRRRMPRLFAH 121
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQ-KHRALDDIRESIMELKYYKENIFK 244
F H ++DVS++ L RW+P DYR P K+Q H AL D+RES+ EL++Y++ IFK
Sbjct: 122 FHHRIIDVSTVAELAARWFPADYRSAPRKKQGSHTALADVRESLEELRFYRKTIFK 177
>gi|183985996|gb|AAI66309.1| LOC100158598 protein [Xenopus (Silurana) tropicalis]
Length = 273
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 118/176 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D I+E+AC+ITD L EGP+L+I Q E LD M +WC+ HH
Sbjct: 75 MVWVDLEMTGLDIEKDHIIEMACLITDSDLDILAEGPNLIIKQPDELLDGMSDWCKEHHG 134
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S +T ++AE + + F++++ LAGNSV+ D FL KYMP
Sbjct: 135 KSGLTQAVRESKITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHADKKFLDKYMPQFMRHL 194
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS++K LC RW P +Y P K HRALDDIRESI EL++Y+ENIFK N
Sbjct: 195 HYRIIDVSTVKELCRRWNPDEYGLAPKKAASHRALDDIRESIKELQFYRENIFKKN 250
>gi|348543638|ref|XP_003459290.1| PREDICTED: oligoribonuclease, mitochondrial-like [Oreochromis
niloticus]
Length = 249
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 121/178 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL +E D+I+E+AC+ITD L EGP+L+I Q E L+ M EWC+ HH
Sbjct: 59 MVWVDLEMTGLDVEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLEGMSEWCKEHHG 118
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S +T +AE + + FV+++ LAGNSV+ D FL KYMP
Sbjct: 119 KSGLTQAVRDSKITLEQAEYEFLSFVRQHTPPGQCPLAGNSVHADKRFLDKYMPQFMYHL 178
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLK 248
+ ++DVS+IK L RW+P +Y+ VP K+ HRAL+DIRESI EL+YY+ NIFK + K
Sbjct: 179 HYRIIDVSTIKELSRRWFPEEYKMVPHKKATHRALEDIRESIKELQYYRANIFKASEK 236
>gi|444518577|gb|ELV12241.1| Oligoribonuclease, mitochondrial [Tupaia chinensis]
Length = 205
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 11 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 71 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 130
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 131 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 183
>gi|426245624|ref|XP_004016609.1| PREDICTED: oligoribonuclease, mitochondrial [Ovis aries]
Length = 290
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 96 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 155
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 156 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 215
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 216 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 268
>gi|410971967|ref|XP_003992432.1| PREDICTED: oligoribonuclease, mitochondrial [Felis catus]
Length = 237
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|301782497|ref|XP_002926662.1| PREDICTED: oligoribonuclease, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281353930|gb|EFB29514.1| hypothetical protein PANDA_016351 [Ailuropoda melanoleuca]
Length = 237
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|126165254|ref|NP_001075204.1| oligoribonuclease, mitochondrial precursor [Bos taurus]
gi|158512836|sp|A2VE52.1|ORN_BOVIN RecName: Full=Oligoribonuclease, mitochondrial; AltName: Full=RNA
exonuclease 2 homolog; AltName: Full=Small fragment
nuclease; Flags: Precursor
gi|126010762|gb|AAI33576.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Bos taurus]
gi|296480277|tpg|DAA22392.1| TPA: oligoribonuclease, mitochondrial precursor [Bos taurus]
gi|440909198|gb|ELR59132.1| Oligoribonuclease, mitochondrial [Bos grunniens mutus]
Length = 237
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|431908298|gb|ELK11896.1| Oligoribonuclease, mitochondrial [Pteropus alecto]
Length = 237
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|403262740|ref|XP_003923732.1| PREDICTED: oligoribonuclease, mitochondrial [Saimiri boliviensis
boliviensis]
Length = 237
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|291383854|ref|XP_002708465.1| PREDICTED: small fragment nuclease [Oryctolagus cuniculus]
Length = 237
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|395844116|ref|XP_003794811.1| PREDICTED: oligoribonuclease, mitochondrial isoform 1 [Otolemur
garnettii]
gi|395844118|ref|XP_003794812.1| PREDICTED: oligoribonuclease, mitochondrial isoform 2 [Otolemur
garnettii]
Length = 237
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|149041576|gb|EDL95417.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_a
[Rattus norvegicus]
Length = 254
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|149716526|ref|XP_001502237.1| PREDICTED: oligoribonuclease, mitochondrial-like [Equus caballus]
Length = 237
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|74152556|dbj|BAE42568.1| unnamed protein product [Mus musculus]
Length = 224
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 30 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 89
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 90 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 149
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 150 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 202
>gi|348574173|ref|XP_003472865.1| PREDICTED: oligoribonuclease, mitochondrial-like [Cavia porcellus]
Length = 237
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|296216233|ref|XP_002754546.1| PREDICTED: oligoribonuclease, mitochondrial [Callithrix jacchus]
Length = 237
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIRELQFYQNNIF 215
>gi|221102082|ref|XP_002161173.1| PREDICTED: oligoribonuclease, mitochondrial-like [Hydra
magnipapillata]
Length = 184
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 125/184 (67%)
Query: 63 LEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMG 122
++F+ LVW+DLEMTGL ++ D I+E+A +ITD L EGPD++I+Q + L +MG
Sbjct: 1 MDFDKDWRLVWVDLEMTGLDVDKDHIIEMAVLITDSDLNIIAEGPDIIINQPESILQNMG 60
Query: 123 EWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKY 182
+WC+ H SGLTK V S +T +E E++++ FV K LLAGN+V+VD FLKKY
Sbjct: 61 DWCKVQHGKSGLTKAVQVSRVTLKECEREMICFVSKYTNKEKCLLAGNTVHVDKEFLKKY 120
Query: 183 MPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENI 242
MPD SL + ++DVS++K LC WYP +Y P K HRAL DIRES+ ELKYY+ I
Sbjct: 121 MPDFMSLLHYRIIDVSTVKELCRAWYPLEYANAPKKINSHRALADIRESVDELKYYRNAI 180
Query: 243 FKTN 246
FK++
Sbjct: 181 FKSS 184
>gi|311263942|ref|XP_003129926.1| PREDICTED: oligoribonuclease, mitochondrial-like [Sus scrofa]
Length = 237
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|62901864|gb|AAY18883.1| CGI-114 [synthetic construct]
Length = 229
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 35 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 94
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 95 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 154
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 155 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 207
>gi|13097411|gb|AAH03445.1| Rexo2 protein [Mus musculus]
Length = 205
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 11 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 71 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 130
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 131 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 183
>gi|159489154|ref|XP_001702562.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280584|gb|EDP06341.1| predicted protein [Chlamydomonas reinhardtii]
Length = 180
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 123/174 (70%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL IE D I+E+ACIITDG+L +SV+GP IH + L+ M +WC+ HH
Sbjct: 1 LVWVDLEMTGLDIEKDTIIEMACIITDGELERSVQGPATAIHHSDAVLEGMNDWCKEHHG 60
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT++V S + AE+ +++F+ ++ LAGNSV+VD +FL K+MP + +
Sbjct: 61 ASGLTQRVRDSRVDMGAAEQMLLDFIAEHTEEGMAQLAGNSVHVDRIFLLKHMPRVVAHL 120
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
++ +VDVSSIK L RW+P+ YRK P K H AL DI+ESI ELKYY++ +FK
Sbjct: 121 NYRIVDVSSIKELARRWFPKTYRKAPRKTLAHTALSDIKESIEELKYYRKAVFK 174
>gi|432105728|gb|ELK31919.1| Oligoribonuclease, mitochondrial [Myotis davidii]
Length = 237
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIRELQFYRNNIF 215
>gi|74214051|dbj|BAE29442.1| unnamed protein product [Mus musculus]
Length = 228
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 34 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 93
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 94 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 153
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 154 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 206
>gi|229366424|gb|ACQ58192.1| Oligoribonuclease, mitochondrial precursor [Anoplopoma fimbria]
Length = 266
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 134/204 (65%), Gaps = 3/204 (1%)
Query: 43 SKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTK 102
S SS N+ + ++Q+S + + +M VW+DLEMTGL IE D+I+E+ACIITD L
Sbjct: 49 SGFGSSVNVQV-SRQSSMSSIAMSQRM--VWVDLEMTGLDIEKDQIIEMACIITDSNLNI 105
Query: 103 SVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT 162
EGP+L+I+Q E L+ M EWC+ HH SGLT+ V S +T +AE + + FV+++
Sbjct: 106 LAEGPNLIINQPNELLEGMSEWCKEHHGKSGLTQAVQDSKITLEQAEYEFLSFVRQHTPP 165
Query: 163 YTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKH 222
LAGNSV+ D FL KYMP + ++DVS+IK LC RW+P +Y+ VP K+ H
Sbjct: 166 GQCPLAGNSVHADKRFLDKYMPQFMYHLHYRIIDVSTIKELCRRWFPEEYKMVPHKKAAH 225
Query: 223 RALDDIRESIMELKYYKENIFKTN 246
RAL DI+ESI EL+ Y+ N+FK +
Sbjct: 226 RALGDIQESIKELQNYRVNVFKAS 249
>gi|74196748|dbj|BAE43110.1| unnamed protein product [Mus musculus]
Length = 237
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|27229283|ref|NP_077195.2| oligoribonuclease, mitochondrial precursor [Mus musculus]
gi|78100196|sp|Q9D8S4.2|ORN_MOUSE RecName: Full=Oligoribonuclease, mitochondrial; AltName: Full=RNA
exonuclease 2 homolog; AltName: Full=Small fragment
nuclease; Flags: Precursor
gi|26357838|dbj|BAB25219.2| unnamed protein product [Mus musculus]
gi|148693756|gb|EDL25703.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Mus musculus]
Length = 237
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|56605730|ref|NP_001008327.1| oligoribonuclease, mitochondrial precursor [Rattus norvegicus]
gi|81910234|sp|Q5U1X1.1|ORN_RAT RecName: Full=Oligoribonuclease, mitochondrial; AltName: Full=RNA
exonuclease 2 homolog; AltName: Full=Small fragment
nuclease; Flags: Precursor
gi|55562847|gb|AAH86420.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Rattus norvegicus]
gi|149041578|gb|EDL95419.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_c
[Rattus norvegicus]
Length = 237
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|4929697|gb|AAD34109.1|AF151872_1 CGI-114 protein [Homo sapiens]
Length = 205
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 11 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 71 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 130
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 131 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 183
>gi|340378519|ref|XP_003387775.1| PREDICTED: oligoribonuclease, mitochondrial-like [Amphimedon
queenslandica]
Length = 178
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 117/174 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++W+DLEMTGL I ILE+ACI+TDG L EGPD+ +H + L SM EW Q+HHE
Sbjct: 5 MIWVDLEMTGLDINKCTILEMACIVTDGNLKVIAEGPDVCVHHPESVLTSMEEWSQDHHE 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL K S + R+ E +++FVK++ + LAGNS+Y D MFL KYMP+ S
Sbjct: 65 KTGLIKSCRESRYSMRDVEIMMLDFVKEHTSQGSCPLAGNSIYCDKMFLIKYMPEFTSYL 124
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVSSIK LC RWY +DY P K+ HRAL+DI+ESI ELKYYK IFK
Sbjct: 125 HYRIVDVSSIKELCRRWYVKDYDLAPKKQNSHRALEDIKESIEELKYYKNKIFK 178
>gi|351702314|gb|EHB05233.1| Oligoribonuclease, mitochondrial [Heterocephalus glaber]
Length = 237
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|344293102|ref|XP_003418263.1| PREDICTED: oligoribonuclease, mitochondrial-like [Loxodonta
africana]
Length = 237
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIRELQFYRNNIF 215
>gi|297690289|ref|XP_002822552.1| PREDICTED: oligoribonuclease, mitochondrial isoform 1 [Pongo
abelii]
gi|332208258|ref|XP_003253217.1| PREDICTED: oligoribonuclease, mitochondrial [Nomascus leucogenys]
gi|426370517|ref|XP_004052209.1| PREDICTED: oligoribonuclease, mitochondrial [Gorilla gorilla
gorilla]
Length = 237
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|302563935|ref|NP_001180742.1| oligoribonuclease, mitochondrial [Macaca mulatta]
gi|402895329|ref|XP_003910782.1| PREDICTED: oligoribonuclease, mitochondrial [Papio anubis]
gi|90080269|dbj|BAE89616.1| unnamed protein product [Macaca fascicularis]
gi|355567066|gb|EHH23445.1| hypothetical protein EGK_06918 [Macaca mulatta]
gi|355752654|gb|EHH56774.1| hypothetical protein EGM_06249 [Macaca fascicularis]
gi|380811550|gb|AFE77650.1| oligoribonuclease, mitochondrial precursor [Macaca mulatta]
gi|383417339|gb|AFH31883.1| oligoribonuclease, mitochondrial precursor [Macaca mulatta]
gi|384946326|gb|AFI36768.1| oligoribonuclease, mitochondrial precursor [Macaca mulatta]
Length = 237
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|417397635|gb|JAA45851.1| Putative oligoribonuclease mitochondrial-like protein [Desmodus
rotundus]
Length = 237
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKVASHRALDDISESIKELQFYRNNIF 215
>gi|224496106|ref|NP_056338.2| oligoribonuclease, mitochondrial precursor [Homo sapiens]
gi|55637001|ref|XP_508768.1| PREDICTED: oligoribonuclease, mitochondrial isoform 2 [Pan
troglodytes]
gi|397467679|ref|XP_003805537.1| PREDICTED: oligoribonuclease, mitochondrial [Pan paniscus]
gi|116242694|sp|Q9Y3B8.3|ORN_HUMAN RecName: Full=Oligoribonuclease, mitochondrial; AltName: Full=RNA
exonuclease 2 homolog; AltName: Full=Small fragment
nuclease; Flags: Precursor
gi|62897961|dbj|BAD96920.1| small fragment nuclease variant [Homo sapiens]
gi|79158846|gb|AAI07888.1| REXO2 protein [Homo sapiens]
gi|85397890|gb|AAI05025.1| Small fragment nuclease [Homo sapiens]
gi|85397892|gb|AAI05027.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Homo sapiens]
gi|119587654|gb|EAW67250.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_b
[Homo sapiens]
gi|189065256|dbj|BAG34979.1| unnamed protein product [Homo sapiens]
gi|219520365|gb|AAI43702.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Homo sapiens]
gi|410222394|gb|JAA08416.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
gi|410222396|gb|JAA08417.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
gi|410250550|gb|JAA13242.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
gi|410350469|gb|JAA41838.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
Length = 237
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|5817183|emb|CAB53690.1| hypothetical protein [Homo sapiens]
gi|49065426|emb|CAG38531.1| DKFZP566E144 [Homo sapiens]
gi|117646830|emb|CAL37530.1| hypothetical protein [synthetic construct]
gi|208965440|dbj|BAG72734.1| REX2, RNA exonuclease 2 homolog [synthetic construct]
Length = 237
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 RSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|410298874|gb|JAA28037.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
gi|410298876|gb|JAA28038.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
Length = 237
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>gi|449489187|ref|XP_002189554.2| PREDICTED: oligoribonuclease, mitochondrial [Taeniopygia guttata]
Length = 204
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 119/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL +E D+ILE+AC+ITD L EGP+L+I+Q E L+S EWC+ HH
Sbjct: 10 MVWVDLEMTGLDVEKDQILEMACLITDCDLNVLAEGPNLIINQPDEVLESKSEWCKEHHG 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S ++ ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 70 KSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMRHL 129
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K LC RWYP +Y P K HRALDDIRESI EL++Y+++IFK
Sbjct: 130 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDIRESIKELQFYRDHIFK 183
>gi|56270497|gb|AAH87528.1| LOC496097 protein, partial [Xenopus laevis]
Length = 223
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 119/175 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D I+E+AC+ITD L EGP+L+I Q E LD M +WC+ HH
Sbjct: 46 MVWVDLEMTGLDIEKDEIIEMACLITDSNLDILAEGPNLIIKQPDELLDGMSDWCKEHHG 105
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S +T ++AE + + F++++ LAGNSV+ D FL KYMP
Sbjct: 106 KSGLTQAVRESRITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHADKKFLDKYMPRFMRHL 165
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ ++DVS++K LC RW+P +Y P K HRALDDIRESI EL++Y+E+IFKT
Sbjct: 166 HYRIIDVSTVKELCRRWHPVEYGLAPKKAASHRALDDIRESIKELQFYRESIFKT 220
>gi|328774277|gb|EGF84314.1| hypothetical protein BATDEDRAFT_9096 [Batrachochytrium
dendrobatidis JAM81]
Length = 188
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 123/179 (68%), Gaps = 1/179 (0%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWIDLEMTGL +E D I+EIACIITDG L E DLV+HQ K +D M +WC H
Sbjct: 9 PLVWIDLEMTGLDLERDVIIEIACIITDGNLNAVQERYDLVLHQPKSVMDQMNDWCIQTH 68
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP-LLAGNSVYVDFMFLKKYMPDLAS 188
SGLTK+V+ S LT ++AE +++FVK+++ +LAGNSV+VD FL K+MP L
Sbjct: 69 GESGLTKQVIESTLTLKDAEATILDFVKRHIPKQREGVLAGNSVHVDRQFLHKHMPLLID 128
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +VDVSSIK + MRWYP Y+K P K+ HRA+ DI ESI ELK Y+ +FK NL
Sbjct: 129 HLHYRIVDVSSIKEIGMRWYPDFYKKAPKKKLAHRAMGDILESIEELKAYRLLMFKQNL 187
>gi|225717126|gb|ACO14409.1| Oligoribonuclease, mitochondrial precursor [Esox lucius]
Length = 207
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 123/178 (69%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K +VW+DLEMTGL IE D+I+E+ACIITD +L GP+L+I+ T E LD M +WC+
Sbjct: 11 KQRMVWVDLEMTGLDIEKDQIIEMACIITDSELNVLAGGPNLIINTTDELLDGMDDWCKE 70
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
HH SGLT+ V +S +T ++AE + + F++++ LAGNSV+ D FL KYMP
Sbjct: 71 HHGNSGLTQAVRNSKITLQQAEYEFLSFIRQHTPPGQCPLAGNSVHADKKFLDKYMPQFM 130
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ ++DVS+IK LC RW+P +Y+ P K+ HRALDDI+ESI EL +Y+ ++FK+
Sbjct: 131 HHLHYRIIDVSTIKELCRRWFPEEYKLAPQKKASHRALDDIQESIKELHFYRAHVFKS 188
>gi|307110015|gb|EFN58252.1| hypothetical protein CHLNCDRAFT_12089, partial [Chlorella
variabilis]
Length = 171
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 119/177 (67%), Gaps = 11/177 (6%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K PL+WIDLEMTGL +E D+IL+IA I TDG + + VEGP+L IHQ +E L +M EWC
Sbjct: 5 KQPLIWIDLEMTGLDVESDQILQIAVICTDGAMEEVVEGPELAIHQPEEVLQTMNEWCVE 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT+ S + EAE+QV+EF+ AGNSV+VD F++K+MP L
Sbjct: 65 QHGKSGLTQACRDSTTSLAEAEQQVLEFI-----------AGNSVHVDLAFMRKHMPRLV 113
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
S+ +VDVS++ LC RW+PR++ + P K+ H AL DIRESI +L YY+ +IFK
Sbjct: 114 DHLSYRIVDVSTVGELCRRWFPREHMRAPKKKNTHTALSDIRESITQLLYYRRSIFK 170
>gi|222628576|gb|EEE60708.1| hypothetical protein OsJ_14203 [Oryza sativa Japonica Group]
Length = 129
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 106/125 (84%)
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
M EWC+ HH ASGL +KVL S ++E +AEKQV++F++K +G+ TPL+AGNSVY+D +FLK
Sbjct: 1 MNEWCKVHHSASGLKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAGNSVYMDLLFLK 60
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
KYMP LA++FSHV+VDVSSI ALC RW+P++ + P KE+ HRA+DDIRESI EL+YYKE
Sbjct: 61 KYMPHLAAIFSHVIVDVSSISALCSRWFPKERKHAPRKEKNHRAMDDIRESIKELQYYKE 120
Query: 241 NIFKT 245
NIFK+
Sbjct: 121 NIFKS 125
>gi|209731072|gb|ACI66405.1| Oligoribonuclease, mitochondrial precursor [Salmo salar]
Length = 207
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 122/175 (69%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+ACIITD +L EGP+L+I+ T E LD M +WC+ HH
Sbjct: 14 MVWVDLEMTGLDIEKDQIIEMACIITDSELNVLSEGPNLIINTTSELLDGMDDWCKEHHG 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S ++ ++AE + + F++++ LAGNSV+ D FL KYMP
Sbjct: 74 NSGLTQAVRDSKISLQQAEYEFLSFIRQHTPPGHCPLAGNSVHADKKFLDKYMPQFMHHL 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ ++DVS+IK LC RW+P +Y+ P K+ HRALDDI+ESI EL +Y+ ++FK+
Sbjct: 134 HYRIIDVSTIKELCRRWFPEEYKLAPQKKASHRALDDIQESIKELHFYRAHVFKS 188
>gi|344257562|gb|EGW13666.1| Oligoribonuclease, mitochondrial [Cricetulus griseus]
Length = 199
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 113/173 (65%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 5 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKGHHG 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S T ++AE + + FV+ LAGNSV+ D FL KYMP
Sbjct: 65 KSGLTKAVKESTTTLQQAEYEFLSFVRLQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 124
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY P K HR LDDI ESI EL++Y+ NIF
Sbjct: 125 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRVLDDISESIKELQFYRNNIF 177
>gi|41152197|ref|NP_957038.1| oligoribonuclease, mitochondrial [Danio rerio]
gi|37590357|gb|AAH59540.1| Small fragment nuclease [Danio rerio]
Length = 199
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 121/179 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+ACI+TD L EGP+L+I+Q + LD M +WC+ HH
Sbjct: 9 MVWVDLEMTGLDIEKDQIIEMACIVTDSDLNVIAEGPNLIINQPDDLLDGMSDWCKEHHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S +T ++AE + + F++++ LAGNSV+ D FL KYMP
Sbjct: 69 KSGLTQAVRDSHITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHADKKFLDKYMPQFMHHL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 249
+ ++DVS+IK L RWYP +Y P K+ HRALDDI+ESI EL++Y+ ++FK KK
Sbjct: 129 HYRIIDVSTIKELSRRWYPEEYNLAPQKKSSHRALDDIQESIKELQFYRTSVFKAKEKK 187
>gi|345317303|ref|XP_001514027.2| PREDICTED: oligoribonuclease, mitochondrial-like [Ornithorhynchus
anatinus]
Length = 238
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 115/173 (66%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L +GP+L+I Q E LDSM EWC+ HH
Sbjct: 44 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAKGPNLIIKQPDELLDSMSEWCKEHHG 103
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 104 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 163
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP DY K HRALDDI ESI EL++Y+ +IF
Sbjct: 164 HYRIIDVSTVKELCRRWYPEDYEFAQKKTASHRALDDISESIKELQFYRNSIF 216
>gi|405966049|gb|EKC31374.1| Oligoribonuclease, mitochondrial [Crassostrea gigas]
Length = 182
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 116/174 (66%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEM+GL I + ILE+ACI+TD +L E D++IHQ L++MGEWC H
Sbjct: 9 IVWVDLEMSGLDINTEHILEMACIVTDAELNIIAESEDIIIHQPDSVLNNMGEWCTEQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V +S + AEK++VEFVK + LAGNS++ D MFL+KYMP
Sbjct: 69 KSGLTEAVRNSKIDLGAAEKKMVEFVKPYIAPSLCPLAGNSIHCDKMFLEKYMPKFMEQL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVSSIK LC RWYP + P K+ HRAL DIRESI ELKYY++ +FK
Sbjct: 129 HYRIIDVSSIKELCRRWYPEALEQAPKKQLSHRALGDIRESIEELKYYRQTVFK 182
>gi|157120016|ref|XP_001653489.1| oligoribonuclease, mitochondrial [Aedes aegypti]
gi|108875103|gb|EAT39328.1| AAEL008865-PC [Aedes aegypti]
Length = 210
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 120/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL++E DRILEIAC+IT+ L GPD+VIH+ +E L++M EWCQ +H
Sbjct: 36 LVWIDLEMTGLEVEKDRILEIACVITNKNLEILERGPDIVIHEPEEVLNAMNEWCQTNHS 95
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL + V S + ++AE+ V++FVKK LAGN++Y+D MFL +YMP L
Sbjct: 96 KTGLIQAVRESKIDLQKAEQMVLDFVKKYCPEKACPLAGNTIYMDRMFLYRYMPQLNEYL 155
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K LC RW + P K+ HRALDDI ESI ELKYYK+ +FK
Sbjct: 156 HYRIIDVSTVKELCKRWNGAVFSNCPPKKLVHRALDDIEESIQELKYYKDYMFK 209
>gi|170050189|ref|XP_001859612.1| oligoribonuclease [Culex quinquefasciatus]
gi|167871717|gb|EDS35100.1| oligoribonuclease [Culex quinquefasciatus]
Length = 214
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 121/174 (69%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL +E DRI+EIACI+T+ L GPD+VIH+ + +++M EWC+ +H
Sbjct: 38 LVWIDLEMTGLNVETDRIIEIACIVTNKNLDVLERGPDIVIHEPAQIMEAMNEWCKVNHA 97
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT+ V S +T EAE+QV++FVK++ LAGNS+Y+D MFL +YMP L
Sbjct: 98 KTGLTQAVADSKVTLAEAEQQVLDFVKRHCPEKACPLAGNSIYMDRMFLNRYMPRLNDYL 157
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK +C RW + P K+ HRAL+DI ESI ELKYYK+ +F+
Sbjct: 158 HYRIVDVSTIKEVCKRWNGSIFSHAPPKKLAHRALEDIEESIKELKYYKQYMFQ 211
>gi|157120012|ref|XP_001653487.1| oligoribonuclease, mitochondrial [Aedes aegypti]
gi|157120014|ref|XP_001653488.1| oligoribonuclease, mitochondrial [Aedes aegypti]
gi|108875101|gb|EAT39326.1| AAEL008865-PB [Aedes aegypti]
gi|108875102|gb|EAT39327.1| AAEL008865-PA [Aedes aegypti]
Length = 192
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 120/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL++E DRILEIAC+IT+ L GPD+VIH+ +E L++M EWCQ +H
Sbjct: 18 LVWIDLEMTGLEVEKDRILEIACVITNKNLEILERGPDIVIHEPEEVLNAMNEWCQTNHS 77
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL + V S + ++AE+ V++FVKK LAGN++Y+D MFL +YMP L
Sbjct: 78 KTGLIQAVRESKIDLQKAEQMVLDFVKKYCPEKACPLAGNTIYMDRMFLYRYMPQLNEYL 137
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K LC RW + P K+ HRALDDI ESI ELKYYK+ +FK
Sbjct: 138 HYRIIDVSTVKELCKRWNGAVFSNCPPKKLVHRALDDIEESIQELKYYKDYMFK 191
>gi|260822769|ref|XP_002606774.1| hypothetical protein BRAFLDRAFT_59133 [Branchiostoma floridae]
gi|229292118|gb|EEN62784.1| hypothetical protein BRAFLDRAFT_59133 [Branchiostoma floridae]
Length = 180
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 118/174 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL ++ I+E+AC+ITD L E PDLVIHQ +D+M +WC+ HH
Sbjct: 5 MVWVDLEMTGLDLDSCHIIEMACLITDDDLNVVAEAPDLVIHQPDAVMDTMNDWCKEHHG 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S L+ + AE +++ FV++ LAGNSV+VD FL+KYMP +
Sbjct: 65 KSGLTEAVRRSELSLQAAEYEMLSFVRQYTPPGVCPLAGNSVHVDKKFLEKYMPQFMNHL 124
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS+IK LC RWYP DY P K HRAL+DIRESI EL++Y+ ++FK
Sbjct: 125 HYRIIDVSTIKELCRRWYPEDYNVSPQKSATHRALEDIRESIKELQFYRSHVFK 178
>gi|330802757|ref|XP_003289380.1| hypothetical protein DICPUDRAFT_56059 [Dictyostelium purpureum]
gi|325080536|gb|EGC34087.1| hypothetical protein DICPUDRAFT_56059 [Dictyostelium purpureum]
Length = 187
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 119/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL I D ILE+ACIITD +L +GP+LVIH++ E L+SM WC +HH
Sbjct: 14 IVWVDLEMTGLDITKDCILEMACIITDSELNIIEKGPELVIHRSNEVLESMNSWCIDHHG 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V +S +T EA+ ++ F++K+VG LAGNSVY D FL+K MP +
Sbjct: 74 KSGLTDRVKNSKITIEEAQLEMFNFIEKHVGKEQAPLAGNSVYQDRKFLEKEMPLFNNHL 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVSSIK L RWYP + +K P KE HRAL DI ESI ELK+Y+ FK
Sbjct: 134 HYRIIDVSSIKELARRWYPTELKKAPKKEGSHRALKDIEESIEELKFYRTAFFK 187
>gi|320163436|gb|EFW40335.1| REXO2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 180
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 119/174 (68%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++W+DLEMTGL + + I+E+ACI+TD + EGPD++IHQ E LD M +WC+ HH
Sbjct: 8 MIWVDLEMTGLDVSTETIIEMACIVTDSRGNILAEGPDIIIHQPDEVLDRMNDWCKEHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT V S + EAE+ ++ FV+++ +LAGN++++D FL +YMP ++
Sbjct: 68 ASGLTAAVRASTTSLAEAEEVMLAFVREHTSKGC-VLAGNTIHMDKRFLDRYMPKFSAHL 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ L+DVS++K LC RWYP + P K+ HRALDDI+ESI EL YY+ N+FK
Sbjct: 127 HYRLIDVSTLKELCRRWYPAIFANAPPKQGLHRALDDIKESIQELVYYQSNMFK 180
>gi|118354790|ref|XP_001010656.1| exonuclease family protein [Tetrahymena thermophila]
gi|89292423|gb|EAR90411.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 190
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 126/179 (70%), Gaps = 2/179 (1%)
Query: 68 KMPLVWIDLEMTGLK-IEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQ 126
K PL+W D EMTGL + D+I+EIA ++TDG+LT+ ++GP+L+I KE L+SM EWC
Sbjct: 11 KDPLLWCDCEMTGLNFLNNDQIIEIATLLTDGELTQVIKGPELIIQAPKELLESMDEWCT 70
Query: 127 NHHEASGLTKKVLHSGLTEREAEKQVVEFVKKN-VGTYTPLLAGNSVYVDFMFLKKYMPD 185
N H+ SGL KVL S +T + AE+QV++F+K N + LLAGNS++ D F++K MP+
Sbjct: 71 NTHKGSGLYDKVLKSEVTLQMAEEQVIKFLKDNGIEQKEALLAGNSIHADMKFIQKQMPN 130
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
L + + LVDVS++K L RW P +K P K+ HRALDDI ESI ELK+Y++ +FK
Sbjct: 131 LYNFLHYRLVDVSTVKELTKRWNPEILKKAPVKKGGHRALDDILESIEELKFYRKEVFK 189
>gi|332373288|gb|AEE61785.1| unknown [Dendroctonus ponderosae]
Length = 220
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 119/176 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL ++ D+I+E+ACI+TD L EG ++VI+Q KE LD+M EWC H
Sbjct: 45 LVWIDMEMTGLNVDQDKIMEVACIVTDTDLNIVAEGLEIVINQPKETLDNMHEWCVKQHG 104
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT+ L S + +AE +++F++ +V + LAGNSVY+D FL KYMP +
Sbjct: 105 KTGLTEACLKSQTSLEQAEDSIMDFLRAHVTPHCSPLAGNSVYMDRFFLIKYMPKVHDYL 164
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +VDVS+IK LC RW Y+ VP KE +HRA DI+ESI EL+YYK FKT+
Sbjct: 165 HYRIVDVSTIKELCRRWNTPVYKSVPKKEFQHRAQCDIKESINELRYYKNAFFKTS 220
>gi|443696841|gb|ELT97456.1| hypothetical protein CAPTEDRAFT_221441 [Capitella teleta]
Length = 190
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 120/178 (67%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEM+GL + RILE+AC+ITD L +GP+L+IHQ ++ L SM EWC HH
Sbjct: 9 LVWVDLEMSGLDVNKCRILEMACLITDSNLNVIAQGPELIIHQAEDVLASMDEWCTEHHA 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S ++ +AE ++ FV+++ LAGN+V++D FL YMP +
Sbjct: 69 KSGLTQAVRDSKVSIVDAEDMMLRFVEEHTPCGKCPLAGNTVHMDKRFLDAYMPRFSEHL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLK 248
+ +VDVS++K +C RW+P PSK HRALDDI+ESI ELK+Y++NIFK +L+
Sbjct: 129 HYRIVDVSTVKEICRRWFPMTIDLAPSKVANHRALDDIKESIEELKFYRKNIFKESLE 186
>gi|158284602|ref|XP_307582.4| Anopheles gambiae str. PEST AGAP012804-PA [Anopheles gambiae str.
PEST]
gi|157020970|gb|EAA03378.5| AGAP012804-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 114/175 (65%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL +E DRILEIACI+TD KL +GP+++I++ L M WC++HH
Sbjct: 46 LVWIDLEMTGLDVEKDRILEIACIVTDSKLNIIAKGPNIIINEPDAVLAGMNSWCKDHHS 105
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + V S + +AE+ V++FVKK +AGNS+Y+D +F+ KYMP L
Sbjct: 106 KSGLIEAVKKSTYSVDQAERDVLDFVKKYCPERKCPMAGNSIYMDRLFIMKYMPTLNEYL 165
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ ++DVS++K LC RW Y P K+ HRALDDI ESI E+KYYK F +
Sbjct: 166 HYRVIDVSTVKELCKRWNQNVYNSSPPKKLAHRALDDIEESINEMKYYKSMFFNS 220
>gi|118790162|ref|XP_318057.3| AGAP004759-PA [Anopheles gambiae str. PEST]
gi|116122385|gb|EAA13240.3| AGAP004759-PA [Anopheles gambiae str. PEST]
Length = 191
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 114/175 (65%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL +E DRILEIACI+TD KL +GP+++I++ L M WC++HH
Sbjct: 9 LVWIDLEMTGLDVEKDRILEIACIVTDSKLNIIAKGPNIIINEPDAVLAGMNSWCKDHHS 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + V S + +AE+ V++FVKK +AGNS+Y+D +F+ KYMP L
Sbjct: 69 KSGLIEAVKKSTYSVDQAERDVLDFVKKYCPERKCPMAGNSIYMDRLFIMKYMPTLNEYL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ ++DVS++K LC RW Y P K+ HRALDDI ESI E+KYYK F +
Sbjct: 129 HYRVIDVSTVKELCKRWNQNVYNSSPPKKLAHRALDDIEESINEMKYYKSMFFNS 183
>gi|406915333|gb|EKD54428.1| hypothetical protein ACD_60C00087G0040 [uncultured bacterium]
Length = 184
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 114/177 (64%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WID+EMTGL E DRI+EIA ++TD +L EGP +HQ E L M W HH
Sbjct: 7 LIWIDMEMTGLNPEKDRIIEIATVVTDSELNVVAEGPVFAVHQPNELLQGMDSWNTKHHN 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S TE EAE ++F+++++ + GNSVY D FL +YMP+L F
Sbjct: 67 ASGLVARVKASHTTEIEAENATLDFLRQHIPAGKSPMCGNSVYQDRRFLYRYMPELEKYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ L+DVS++K L +RW PR Y V KE KH ALDDIRESI ELKYY+ ++F ++
Sbjct: 127 HYRLLDVSTLKELALRWAPRVYSGV-QKESKHLALDDIRESIEELKYYRAHLFNPDV 182
>gi|221487325|gb|EEE25557.1| oligoribonuclease protein, putative [Toxoplasma gondii GT1]
Length = 367
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 121/182 (66%), Gaps = 7/182 (3%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
+ P+VW+D EMTGL +E D+I+EIA I+TDG+ K + GP+L++H + E LD M EWC+
Sbjct: 189 QAPIVWVDCEMTGLDVETDQIIEIAVIVTDGQCKKRIVGPNLIVHASDELLDGMDEWCKK 248
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDL 186
H SGLT S LT +AE+Q++EFV+K+V T L GNSV+VD FL K MP L
Sbjct: 249 THGESGLTAACRKSTLTLADAEEQILEFVQKHVATTRVAPLGGNSVHVDRQFLVKQMPRL 308
Query: 187 ASLFSHVLVDVSSIKALCMRWYPRDYRKVP--SKEQKHRALDDIRESIMELKYYKENIFK 244
+ S+ ++DVS+IK L MRW P ++P K HRAL+DI ESI EL YY ++F+
Sbjct: 309 IAHLSYRIIDVSTIKELAMRWKP----ELPLVKKAANHRALEDIHESIDELLYYTRHLFR 364
Query: 245 TN 246
+
Sbjct: 365 VD 366
>gi|156379361|ref|XP_001631426.1| predicted protein [Nematostella vectensis]
gi|156218466|gb|EDO39363.1| predicted protein [Nematostella vectensis]
Length = 171
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 113/169 (66%)
Query: 78 MTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKK 137
MTGL I+ I+E+AC++TD L EGP+LVIHQ + LD+MGEWC H SGLT
Sbjct: 1 MTGLDIDTCHIIEMACLVTDENLKIIAEGPNLVIHQPDDVLDAMGEWCTRQHGESGLTAA 60
Query: 138 VLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDV 197
V S ++ ++AE +V FV ++V + LAGNSV+ D FL KYMP + +VDV
Sbjct: 61 VKASDISLQKAEDIMVGFVSQHVTPGSCPLAGNSVHADKRFLDKYMPKFMEQLHYRIVDV 120
Query: 198 SSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
S++K LC RWYP+++ P+K +HRALDDI++SI EL+YY+E IFK
Sbjct: 121 STVKELCRRWYPKEFGAAPAKSGQHRALDDIKDSIKELQYYREAIFKAG 169
>gi|440794028|gb|ELR15199.1| Oligoribonuclease, mitochondrial precursor, putative [Acanthamoeba
castellanii str. Neff]
Length = 206
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 116/183 (63%), Gaps = 10/183 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL D I+E+AC+ITD L E DLVIHQ + LDSM +WC+ HH
Sbjct: 14 LVWVDLEMTGLDTRKDHIMEMACLITDANLNIVAETDDLVIHQPDDVLDSMNDWCKTHHG 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT+ S ++ EAE++++ FV+ + +LAGN+V+ D FL+ YMP
Sbjct: 74 ASGLTQACRESKVSVAEAEERMLRFVEAHTQPGAAILAGNTVHADKGFLQVYMPRFMGHL 133
Query: 191 SHVLV----------DVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
+ ++ DVS++K LC RWYP + K P K HRAL+DI+ESI EL++Y+E
Sbjct: 134 HYRIMARHHPRSLFHDVSTVKELCRRWYPETFAKAPPKAGSHRALEDIKESIKELQFYRE 193
Query: 241 NIF 243
+IF
Sbjct: 194 HIF 196
>gi|390357728|ref|XP_780396.2| PREDICTED: oligoribonuclease, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 222
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 119/181 (65%), Gaps = 4/181 (2%)
Query: 66 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWC 125
E K LVW+DLEMTGL ++ I+E+AC+ITD +L EGP+++IHQ E LD M +WC
Sbjct: 44 ELKSRLVWVDLEMTGLDLDTCHIIEMACLITDQELNVVAEGPNIIIHQPDEILDKMNDWC 103
Query: 126 QNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL--LAGNSVYVDFMFLKKYM 183
HH ASGL V S +T ++AE +++ FV++ TY L LAGNS++VD FL KYM
Sbjct: 104 VQHHTASGLVDAVKASKITLQQAEYEMLSFVREY--TYPKLCPLAGNSIHVDKTFLVKYM 161
Query: 184 PDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
P + +VDVS++K LC RWY +Y K+ HRA+ DI+ES+ EL+YY+ IF
Sbjct: 162 PQFMDHLHYRIVDVSTVKELCRRWYREEYEAGNQKKGSHRAMGDIKESLEELRYYRRTIF 221
Query: 244 K 244
K
Sbjct: 222 K 222
>gi|237829909|ref|XP_002364252.1| oligoribonuclease, putative [Toxoplasma gondii ME49]
gi|211961916|gb|EEA97111.1| oligoribonuclease, putative [Toxoplasma gondii ME49]
gi|221507120|gb|EEE32724.1| oligoribonuclease, putative [Toxoplasma gondii VEG]
Length = 367
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 121/182 (66%), Gaps = 7/182 (3%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
+ P+VW+D EMTGL +E D+I+EIA I+TDG+ K + GP+L++H + E LD M EWC+
Sbjct: 189 QAPIVWVDCEMTGLDVETDQIIEIAVIVTDGQCKKRIVGPNLIVHASDELLDGMDEWCKK 248
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDL 186
H SGLT S LT +AE+Q++EFV+K+V T L GNSV+VD FL K MP L
Sbjct: 249 THGESGLTAACRKSTLTLADAEEQILEFVQKHVATTRVAPLGGNSVHVDRQFLVKQMPRL 308
Query: 187 ASLFSHVLVDVSSIKALCMRWYPRDYRKVP--SKEQKHRALDDIRESIMELKYYKENIFK 244
+ S+ ++DVS+IK L MRW P ++P K HRAL+DI ESI EL YY ++F+
Sbjct: 309 IAHLSYRIIDVSTIKELAMRWKP----ELPLVKKAANHRALEDIHESIDELLYYTRHLFR 364
Query: 245 TN 246
+
Sbjct: 365 VD 366
>gi|194745839|ref|XP_001955392.1| GF18739 [Drosophila ananassae]
gi|190628429|gb|EDV43953.1| GF18739 [Drosophila ananassae]
Length = 187
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 115/174 (66%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL E D+ILE+AC+ITD L EGP I+ +E D+M EWC HH
Sbjct: 14 IVWMDLEMTGLDFEKDKILELACVITDKDLNVKSEGPCFAINHPQEVYDNMNEWCMKHHY 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + +S + ++AE+ ++ ++KKN+ L GNSVY+D +FL+K+MP++
Sbjct: 74 ESGLVDRCKNSQVKPKQAEELMLSYLKKNIPERKCPLGGNSVYMDRLFLRKFMPNVDEYL 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS IK L RWYP P K+ HR+LDDI ESI ELKYYK+++FK
Sbjct: 134 HYRIVDVSIIKELAKRWYPDVASGTPQKKLAHRSLDDILESIEELKYYKQSLFK 187
>gi|384499133|gb|EIE89624.1| hypothetical protein RO3G_14335 [Rhizopus delemar RA 99-880]
Length = 185
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 116/166 (69%), Gaps = 1/166 (0%)
Query: 78 MTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKK 137
MTGL I+ D ++EIA +ITDG L +GP+LVI+Q KE +DSM EWC HH SGLT+K
Sbjct: 14 MTGLDIKKDHLIEIAVLITDGDLNIVAKGPELVIYQPKEIMDSMNEWCTEHHGKSGLTQK 73
Query: 138 VLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDV 197
VL S +T +EAE+QV EF+++++ LAGNSV+ D +FL K MP + + +VDV
Sbjct: 74 VLESKITTKEAERQVFEFLQQHIPKGVAPLAGNSVHADKVFLNKEMPSIVDYLHYRIVDV 133
Query: 198 SSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
S++K L RWYP +V K+ HRALDDI ESI ELKYY++++F
Sbjct: 134 STVKELAKRWYPNIASRV-VKKSTHRALDDIIESIEELKYYQKHLF 178
>gi|324509601|gb|ADY44034.1| Oligoribonuclease [Ascaris suum]
Length = 198
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 119/174 (68%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WID EMTGL + ++EIACI+T+ L+ EGPD+VI Q ++ L +M WC++
Sbjct: 25 LIWIDCEMTGLDVRQHTLVEIACIVTEADLSVVAEGPDIVISQPEDVLANMSSWCRSTFA 84
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL +K+ S ++ + AE QV+ F+K++ LAGNSV++D +F+++YMP+L
Sbjct: 85 RNGLLQKIRESNISIKAAESQVLSFLKEHTDPGKCPLAGNSVHMDRVFIERYMPNLVKHL 144
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK + RWYP ++ P K QKHRALDDIRESI EL +Y+ +IFK
Sbjct: 145 HYRIVDVSTIKEVARRWYPLEFASSPQKLQKHRALDDIRESIQELHWYRSHIFK 198
>gi|21355135|ref|NP_651184.1| CG10214 [Drosophila melanogaster]
gi|11133808|sp|Q9VCI0.1|ORN_DROME RecName: Full=Probable oligoribonuclease
gi|7301049|gb|AAF56185.1| CG10214 [Drosophila melanogaster]
gi|16769160|gb|AAL28799.1| LD18757p [Drosophila melanogaster]
gi|220942706|gb|ACL83896.1| CG10214-PA [synthetic construct]
gi|220952944|gb|ACL89015.1| CG10214-PA [synthetic construct]
Length = 211
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 109/174 (62%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+ILE+ACIITD L EGP I+ +E DSM EWC HH
Sbjct: 38 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHHY 97
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S + EA V+ +++KN+ L GNSVY D +F+ K+MP + +
Sbjct: 98 NSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFMPLVDAYL 157
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK L RW+P P K HR+LDDIRESI EL YYK N+FK
Sbjct: 158 HYRIVDVSTIKELAKRWHPAILDSAPKKSFTHRSLDDIRESIKELAYYKANLFK 211
>gi|385332247|ref|YP_005886198.1| oligoribonuclease [Marinobacter adhaerens HP15]
gi|311695397|gb|ADP98270.1| oligoribonuclease [Marinobacter adhaerens HP15]
Length = 180
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E +RI+E+A IITD +L EGP + +HQ + LDSM EWC H
Sbjct: 7 LVWIDLEMTGLDPEKERIIEMATIITDSELNIVAEGPVIAVHQPQSFLDSMDEWCTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK+V S ++E +AE+Q +EF+KK+V L GNS+ D FL KYMP+L F
Sbjct: 67 ESGLTKRVQESDISESQAEQQTIEFLKKHVEKGQSPLCGNSIGQDRRFLVKYMPELEGFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K+ H ALDDIR+SI EL++Y+E FK
Sbjct: 127 HYRNLDVSTVKELARRWRP-DVLAGVKKKGSHLALDDIRDSINELRHYREQFFK 179
>gi|358450310|ref|ZP_09160775.1| oligoribonuclease [Marinobacter manganoxydans MnI7-9]
gi|357225697|gb|EHJ04197.1| oligoribonuclease [Marinobacter manganoxydans MnI7-9]
Length = 180
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E +RI+E+A IITD +L EGP + +HQ + LDSM EWC H
Sbjct: 7 LVWIDLEMTGLDPEKERIIEMATIITDSELNIVAEGPVIAVHQPQSFLDSMDEWCTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK+V S ++E +AE+Q +EF+KK+V L GNS+ D FL KYMP+L F
Sbjct: 67 ESGLTKRVQESDISESQAEQQTIEFLKKHVEKGQSPLCGNSIGQDRRFLVKYMPELEDFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K+ H ALDDIR+SI EL++Y+E FK
Sbjct: 127 HYRNLDVSTVKELARRWRP-DVLAGVKKKGSHLALDDIRDSINELRHYREQFFK 179
>gi|156551223|ref|XP_001602293.1| PREDICTED: oligoribonuclease, mitochondrial-like [Nasonia
vitripennis]
Length = 188
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 111/176 (63%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID+EMTGL +E DRILE+AC+ITD L + V+HQ+ + L M EWCQ HH
Sbjct: 10 IVWIDMEMTGLAVESDRILEVACLITDENLNIVSDEFHQVLHQSDDELARMNEWCQEHHT 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S ER +K + F+ K + +AGNSVY+D +FL+KYMP
Sbjct: 70 KSGLVEASKKSQEDERSVDKSLYNFLNKYIPKGRCPMAGNSVYMDRLFLRKYMPTSNEYM 129
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVSSIK + RW P + P KE+ HR+LDDIRESI EL +Y++N+F N
Sbjct: 130 HYRIIDVSSIKEVVRRWKPEVHDAAPKKERNHRSLDDIRESISELDFYRKNVFNAN 185
>gi|449019878|dbj|BAM83280.1| probable oligoribonuclease, mitochondrial precursor
[Cyanidioschyzon merolae strain 10D]
Length = 188
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKL-TKSVEGPDLVIHQTKECLDSMGEWCQNH 128
P+VWID EMTGL E D +LE+ACI+T G L T +EGP ++ L M + +
Sbjct: 6 PIVWIDCEMTGLDPEKDALLEVACIVTSGDLNTTVIEGPSFILQAPAAALAGMSDKVRAM 65
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKK-NVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGL +V + L+ AE +++EF++ VG LAGNSV+VD FL +YMP L
Sbjct: 66 HSNSGLIDEVYQATLSAESAELKILEFLEAVGVGPQVAPLAGNSVHVDRRFLARYMPKLD 125
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ + ++DVS++K LC RWYP + + P+K+ HRALDDIRESI EL +Y+EN+F+
Sbjct: 126 AYLHYRIIDVSTVKELCRRWYPNVFSRAPAKQGAHRALDDIRESISELVFYRENVFR 182
>gi|328873520|gb|EGG21887.1| nucleotide binding protein 1-like protein [Dictyostelium
fasciculatum]
Length = 879
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 113/173 (65%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL I DRI+EIACI+TD L GPDL ++ LD MG+WC+ HH
Sbjct: 104 LIWVDLEMTGLDITKDRIMEIACIVTDDNLQVIEAGPDLCVYIDDAALDGMGKWCKEHHG 163
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++ S ++ +EAEK +VEF+ K+V LAGN+V+ D FL K MP A
Sbjct: 164 DSGLTQRCRESKISIQEAEKIMVEFLAKHVHKGMCPLAGNTVHEDKKFLLKEMPLFAEYL 223
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVS+IK L RWYP K P K HR+L DI +SI E+K+Y+++IF
Sbjct: 224 HYRIVDVSTIKELARRWYPNVMEKAPVKRYLHRSLADIEDSIEEMKFYQKHIF 276
>gi|425065764|ref|ZP_18468884.1| 3'-to-5' oligoribonuclease (orn) [Pasteurella multocida subsp.
gallicida P1059]
gi|404384140|gb|EJZ80585.1| 3'-to-5' oligoribonuclease (orn) [Pasteurella multocida subsp.
gallicida P1059]
Length = 184
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ+ ECL M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPESERIIEIATIVTDKHLNILAEGPVLAIHQSDECLAKMNDWCMK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V +S LTEREAE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTENGLVERVKNSRLTEREAELQTLDFLKKWVPKGVSPICGNSVSQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
F + +DVS++K L RW P D K +K+ H ALDDIRESI EL YY+E+ NL
Sbjct: 125 DYFHYRHLDVSTLKELASRWKP-DVLKGFTKKNTHLALDDIRESIAELAYYREHFI--NL 181
Query: 248 K 248
K
Sbjct: 182 K 182
>gi|296139064|ref|YP_003646307.1| exonuclease RNase T and DNA polymerase III [Tsukamurella
paurometabola DSM 20162]
gi|296027198|gb|ADG77968.1| Exonuclease RNase T and DNA polymerase III [Tsukamurella
paurometabola DSM 20162]
Length = 198
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 111/173 (64%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL + DR++EIA ++TDG L EG DLVIH LD+M Q+ H
Sbjct: 5 LVWVDCEMTGLDLTSDRLIEIAALVTDGDLNILGEGVDLVIHVDDAALDAMPPVVQDMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S +T REAE+ V+ ++++++ T LAGNS+ D F+ + MP+L
Sbjct: 65 KSGLTDEVRRSTVTVREAEEAVLAYLREHIEPGTVPLAGNSIATDRRFIAQEMPELDGFL 124
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DIRESI ELKYY+ F
Sbjct: 125 HYRMVDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIRESIRELKYYRSTAF 177
>gi|417839979|ref|ZP_12486138.1| Oligoribonuclease [Haemophilus haemolyticus M19107]
gi|341951105|gb|EGT77685.1| Oligoribonuclease [Haemophilus haemolyticus M19107]
Length = 182
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSNELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V T + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKTSKLTERAAELQTLDFLKKWVPKGTSPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|163802739|ref|ZP_02196629.1| oligoribonuclease [Vibrio sp. AND4]
gi|159173446|gb|EDP58268.1| oligoribonuclease [Vibrio sp. AND4]
Length = 181
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ KE L M EWC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPKEELAKMDEWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V HS ++E++A +Q +EF++K V + GNS+ D FL K+MPDL + F
Sbjct: 68 TSGLVERVCHSQISEQDAVEQTIEFLQKWVPRGVSPICGNSIGQDRRFLYKHMPDLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|449267375|gb|EMC78320.1| Oligoribonuclease, mitochondrial, partial [Columba livia]
Length = 184
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 108/162 (66%)
Query: 83 IEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSG 142
+E D+ILE+AC+ITD L EGP+L+I+Q E LD M EWC+ HH SGLTK V S
Sbjct: 2 VEKDQILEMACLITDCDLNVLAEGPNLIINQPDELLDGMSEWCKEHHGKSGLTKAVKESK 61
Query: 143 LTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKA 202
++ ++AE + + FV++ LAGNSV+ D FL KYMP + ++DVS++K
Sbjct: 62 ISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMRHLHYRIIDVSTVKE 121
Query: 203 LCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
LC RWYP +Y P K HRALDDIRESI EL++Y+++IFK
Sbjct: 122 LCRRWYPEEYDFAPKKAASHRALDDIRESIKELQFYRDSIFK 163
>gi|281201272|gb|EFA75484.1| RNA exonuclease 2 [Polysphondylium pallidum PN500]
Length = 451
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 115/177 (64%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL I D I+E+ACIITD +L GP+L++H + L+SM +WC HH
Sbjct: 275 LIWVDLEMTGLDITKDHIMEMACIITDSELNVVEVGPELIVHIDDKDLNSMDQWCTEHHG 334
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+K S L+ ++AEKQ+VEF++K+V LAGNSV+ D FL K MP A +
Sbjct: 335 QSGLTEKCRQSKLSIQDAEKQMVEFLRKHVDKGQCPLAGNSVHQDKRFLLKEMPLFADML 394
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +VDVS+IK L RWYP + K HR L DI +SI ELKYY+ +FK L
Sbjct: 395 HYRIVDVSTIKELVRRWYPSVANGL-KKRNLHRTLADIEDSIEELKYYRSTVFKQQL 450
>gi|89094643|ref|ZP_01167580.1| oligoribonuclease [Neptuniibacter caesariensis]
gi|89081113|gb|EAR60348.1| oligoribonuclease [Neptuniibacter caesariensis]
Length = 186
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 115/179 (64%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ D I+EIA I+TD L EGP L IHQ+ E +D+M EWC N
Sbjct: 9 KNNLIWIDLEMTGLEPATDVIIEIATIVTDSDLNVLAEGPTLAIHQSDEIMDNMDEWCTN 68
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S +TE EAE+ +EF+K+ V + GNS+ D FL KYMP+L
Sbjct: 69 QHGKSGLTQRVKESTVTEAEAEQATIEFLKQYVEAGVSPMCGNSIGQDRRFLDKYMPELE 128
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ F + +DVSS+K L RW P V K+ H ALDDIR+SI ELK+Y+E+ K +
Sbjct: 129 AFFHYRNLDVSSLKELAKRWKPEVAAGV-VKKGSHLALDDIRDSIEELKHYREHFIKLD 186
>gi|378697955|ref|YP_005179913.1| oligoribonuclease [Haemophilus influenzae 10810]
gi|301170471|emb|CBW30078.1| oligoribonuclease [Haemophilus influenzae 10810]
Length = 182
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 114/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLEPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGSSPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFIKLD 182
>gi|15602765|ref|NP_245837.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
Pm70]
gi|378774613|ref|YP_005176856.1| oligoribonuclease [Pasteurella multocida 36950]
gi|383310583|ref|YP_005363393.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
HN06]
gi|386833947|ref|YP_006239262.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
3480]
gi|417850853|ref|ZP_12496674.1| oligoribonuclease [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|421263636|ref|ZP_15714667.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|425063589|ref|ZP_18466714.1| 3'-to-5' oligoribonuclease (orn) [Pasteurella multocida subsp.
gallicida X73]
gi|13431730|sp|P57885.1|ORN_PASMU RecName: Full=Oligoribonuclease
gi|12721214|gb|AAK02984.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|338220282|gb|EGP05822.1| oligoribonuclease [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|356597161|gb|AET15887.1| oligoribonuclease [Pasteurella multocida 36950]
gi|380871855|gb|AFF24222.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
HN06]
gi|385200648|gb|AFI45503.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
3480]
gi|401689322|gb|EJS84785.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|404382704|gb|EJZ79162.1| 3'-to-5' oligoribonuclease (orn) [Pasteurella multocida subsp.
gallicida X73]
Length = 184
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ+ ECL M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPESERIIEIATIVTDKHLNILAEGPVLAIHQSDECLAKMNDWCMK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V +S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTENGLVERVKNSRLTERAAELQTLDFLKKWVPKGVSPICGNSVSQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
F + +DVS++K L RW P D K +K+ H ALDDIRESI EL YY+E+ NL
Sbjct: 125 DYFHYRHLDVSTLKELASRWKP-DVLKGFTKKNTHLALDDIRESIAELAYYREHFI--NL 181
Query: 248 K 248
K
Sbjct: 182 K 182
>gi|196004630|ref|XP_002112182.1| hypothetical protein TRIADDRAFT_23482 [Trichoplax adhaerens]
gi|190586081|gb|EDV26149.1| hypothetical protein TRIADDRAFT_23482, partial [Trichoplax
adhaerens]
Length = 165
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 110/165 (66%)
Query: 80 GLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVL 139
GL + I+E+ACIITDG L + E P LVIHQ +D+M EWC HH SGLT V
Sbjct: 1 GLDVNSCHIIEMACIITDGNLNIAAEAPTLVIHQPDSIMDNMDEWCTEHHGKSGLTNAVK 60
Query: 140 HSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSS 199
S ++ ++AE +++FV+++ LAGN+VY+D FL+KYMP + +VDVS+
Sbjct: 61 SSTISLQQAENTMLDFVRQHTLPKRCPLAGNTVYMDQKFLEKYMPQFVDHLHYRIVDVST 120
Query: 200 IKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
IK LC RWYP+++ K P+K HRALDDI++SI E+++Y+ IF+
Sbjct: 121 IKELCRRWYPKEFAKAPAKPCNHRALDDIKDSIQEMQFYRSVIFR 165
>gi|297269235|ref|XP_002799845.1| PREDICTED: oligoribonuclease, mitochondrial-like isoform 2 [Macaca
mulatta]
Length = 222
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 107/173 (61%), Gaps = 15/173 (8%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 ---------------KQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 147
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 148 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 200
>gi|195573238|ref|XP_002104602.1| GD18354 [Drosophila simulans]
gi|194200529|gb|EDX14105.1| GD18354 [Drosophila simulans]
Length = 208
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 106/174 (60%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+ILE+ACIITD L EGP I+ +E DSM EWC H
Sbjct: 35 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMEQHY 94
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S + EA V+ +++KN+ L GNSVY D +F+ K+MP +
Sbjct: 95 KSGLIDRCKSSDVKPEEASNLVLSYIEKNIPKGVCPLGGNSVYTDRLFIMKFMPLVNDYL 154
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK L RW P P K HR+LDDIRESI EL YYK N+FK
Sbjct: 155 HYRIVDVSTIKELAKRWRPEILASAPKKLCTHRSLDDIRESIKELAYYKANLFK 208
>gi|417853565|ref|ZP_12498929.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338219325|gb|EGP05003.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
Anand1_goat]
Length = 184
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ+ ECL M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPESERIIEIATIVTDKHLNILAEGPVLAIHQSDECLAKMNDWCMK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V +S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTENGLVERVKNSRLTERAAELQTLDFLKKWVPKGVSPICGNSVSQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
F + +DVS++K L RW P D K +K+ H ALDDIRESI EL YY+E+ NL
Sbjct: 125 DYFYYRHLDVSTLKELASRWKP-DVLKGFTKKNTHLALDDIRESIAELAYYREHFI--NL 181
Query: 248 K 248
K
Sbjct: 182 K 182
>gi|260582817|ref|ZP_05850603.1| oligoribonuclease [Haemophilus influenzae NT127]
gi|260094143|gb|EEW78045.1| oligoribonuclease [Haemophilus influenzae NT127]
Length = 182
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILESF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|403720288|ref|ZP_10943880.1| oligoribonuclease [Gordonia rhizosphera NBRC 16068]
gi|403207855|dbj|GAB88211.1| oligoribonuclease [Gordonia rhizosphera NBRC 16068]
Length = 199
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL+IE D+++EIA ++TD +L EG D+VIH + E L +M + H
Sbjct: 5 LVWIDCEMTGLRIESDKLIEIAALVTDSELNVLGEGVDIVIHASDEDLAAMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S ++ EAEKQV+++++ V T + LAGNS+ D FL +YMP+L +
Sbjct: 65 DSGLTDEVRASTVSVAEAEKQVLDYIRSQVTTAGAVPLAGNSIATDRAFLARYMPELDNY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYP+ Y P K HRAL DI+ESI ELKYY+ F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPKIYFGQPEKGLAHRALADIKESIRELKYYRATAF 178
>gi|453383301|dbj|GAC82202.1| oligoribonuclease [Gordonia paraffinivorans NBRC 108238]
Length = 199
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 117/174 (67%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TDG L +G D+VIH E L +M + + H
Sbjct: 5 LVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDEALAAMPDVVKKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAEK V+++++K+V T + LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTEEVRRSTVTLAEAEKMVLDYIRKHVTTPGAVPLAGNSIATDRNFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DIRESI EL+YY+E F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIRESIRELRYYREAAF 178
>gi|145637656|ref|ZP_01793311.1| oligoribonuclease [Haemophilus influenzae PittHH]
gi|145269179|gb|EDK09127.1| oligoribonuclease [Haemophilus influenzae PittHH]
Length = 182
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLEPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFIKLD 182
>gi|319776026|ref|YP_004138514.1| oligoribonuclease [Haemophilus influenzae F3047]
gi|317450617|emb|CBY86837.1| oligoribonuclease [Haemophilus influenzae F3047]
Length = 182
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL +++ S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILESF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|321470748|gb|EFX81723.1| hypothetical protein DAPPUDRAFT_92597 [Daphnia pulex]
Length = 185
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 112/174 (64%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL D ILE AC+ITD L EGP+++I+Q LD MGEWC+ H
Sbjct: 12 IVWMDLEMTGLDETKDYILEAACLITDQDLNIVAEGPNIIINQPDSILDGMGEWCKKTHG 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ +S ++ EA++Q+V+F+ + LAGNS+ D FL KYMP L +
Sbjct: 72 ESGLTEACRNSNISVEEAQEQLVDFIGRYTNPGECPLAGNSIGEDKRFLYKYMPKLINHL 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS+IK L RW P + P K HRA+DDI+ES++EL +YK NIFK
Sbjct: 132 HYRIIDVSTIKELGRRWNPDVLKNAPPKSLTHRAMDDIKESLIELSFYKANIFK 185
>gi|319896797|ref|YP_004134991.1| oligoribonuclease [Haemophilus influenzae F3031]
gi|317432300|emb|CBY80653.1| oligoribonuclease [Haemophilus influenzae F3031]
Length = 182
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLEPEKERIIEIATIMTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|145629185|ref|ZP_01784984.1| oligoribonuclease [Haemophilus influenzae 22.1-21]
gi|145639128|ref|ZP_01794735.1| oligoribonuclease [Haemophilus influenzae PittII]
gi|148827138|ref|YP_001291891.1| oligoribonuclease [Haemophilus influenzae PittGG]
gi|166216262|sp|A5UFF2.1|ORN_HAEIG RecName: Full=Oligoribonuclease
gi|144978688|gb|EDJ88411.1| oligoribonuclease [Haemophilus influenzae 22.1-21]
gi|145271690|gb|EDK11600.1| oligoribonuclease [Haemophilus influenzae PittII]
gi|148718380|gb|ABQ99507.1| oligoribonuclease [Haemophilus influenzae PittGG]
gi|309750709|gb|ADO80693.1| Oligoribonuclease [Haemophilus influenzae R2866]
Length = 182
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|68250317|ref|YP_249429.1| oligoribonuclease [Haemophilus influenzae 86-028NP]
gi|148825742|ref|YP_001290495.1| oligoribonuclease [Haemophilus influenzae PittEE]
gi|373468043|ref|ZP_09559327.1| oligoribonuclease [Haemophilus sp. oral taxon 851 str. F0397]
gi|81335262|sp|Q4QJM8.1|ORN_HAEI8 RecName: Full=Oligoribonuclease
gi|166216261|sp|A5UBG1.1|ORN_HAEIE RecName: Full=Oligoribonuclease
gi|68058516|gb|AAX88769.1| oligoribonuclease [Haemophilus influenzae 86-028NP]
gi|148715902|gb|ABQ98112.1| oligoribonuclease [Haemophilus influenzae PittEE]
gi|371756885|gb|EHO45688.1| oligoribonuclease [Haemophilus sp. oral taxon 851 str. F0397]
Length = 182
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|315634034|ref|ZP_07889323.1| oligoribonuclease [Aggregatibacter segnis ATCC 33393]
gi|315477284|gb|EFU68027.1| oligoribonuclease [Aggregatibacter segnis ATCC 33393]
Length = 182
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 114/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ+ E L+ M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIHQSDELLNKMSDWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V +S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTANGLVERVKNSKLTERAAELQTLDFLKKYVPKGVSPICGNSVAQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P SK+ H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILDGF-SKQNTHLALDDIRESIKELAYYREHFLKMD 182
>gi|329123183|ref|ZP_08251752.1| oligoribonuclease [Haemophilus aegyptius ATCC 11116]
gi|327471528|gb|EGF16972.1| oligoribonuclease [Haemophilus aegyptius ATCC 11116]
Length = 182
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLEPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL +++ S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|342904959|ref|ZP_08726754.1| Oligoribonuclease [Haemophilus haemolyticus M21621]
gi|341952195|gb|EGT78731.1| Oligoribonuclease [Haemophilus haemolyticus M21621]
Length = 182
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKDASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|417844795|ref|ZP_12490834.1| Oligoribonuclease [Haemophilus haemolyticus M21639]
gi|341956275|gb|EGT82705.1| Oligoribonuclease [Haemophilus haemolyticus M21639]
Length = 182
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK + + + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWIPKGSSPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFIKLD 182
>gi|392540394|ref|ZP_10287531.1| oligoribonuclease [Pseudoalteromonas piscicida JCM 20779]
Length = 181
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + D+ILEIA +ITDG L EGP + IHQ+ E LD+M EWC N H
Sbjct: 8 LIWLDLEMTGLEPKTDKILEIATVITDGDLNVLAEGPVVAIHQSDELLDNMDEWCTNQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S TE +A KQ ++F+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 RSGLTARCKASQFTEADAVKQTLDFLKEWVPPGASPMCGNSIGQDRRFLNKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS+IK L RW P ++ K+ H ALDDI++SIMELK Y+E FK
Sbjct: 128 HYRNLDVSTIKELARRWKPELLGEI-KKKSSHLALDDIKDSIMELKVYQEKFFKV 181
>gi|417844047|ref|ZP_12490110.1| Oligoribonuclease [Haemophilus haemolyticus M21127]
gi|341947999|gb|EGT74638.1| Oligoribonuclease [Haemophilus haemolyticus M21127]
Length = 182
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGSSPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILDGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|442609992|ref|ZP_21024718.1| 3'-to-5' oligoribonuclease (orn) [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441748439|emb|CCQ10780.1| 3'-to-5' oligoribonuclease (orn) [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 181
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ E DRILEI ++TDG L EGP + IHQ+ E LD+M EWC N H
Sbjct: 8 LIWLDLEMTGLEPETDRILEIGTVVTDGDLNVLAEGPVIAIHQSDELLDNMDEWCINQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S LTE +A KQ ++F+K V + GNS+ D FL KYMP+L F
Sbjct: 68 RSGLTARCKASTLTEEDAIKQTLDFLKHWVPPGKSPMCGNSIGQDRRFLVKYMPELEGYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS+IK L RW P D K+ H ALDDI++SIMELK Y+E FK
Sbjct: 128 HYRNIDVSTIKELARRWKP-DLLGEVKKKSSHLALDDIKDSIMELKVYQEKFFKV 181
>gi|409202547|ref|ZP_11230750.1| oligoribonuclease [Pseudoalteromonas flavipulchra JG1]
Length = 181
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + D+ILEIA +ITDG L EGP + IHQ+ E LD+M EWC N H
Sbjct: 8 LIWLDLEMTGLEPKTDKILEIATVITDGDLNVLAEGPVVAIHQSDELLDNMDEWCTNQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S TE +A KQ ++F+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 RSGLTARCKASKFTEADAVKQTLDFLKEWVPPGASPMCGNSIGQDRRFLNKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS+IK L RW P ++ K+ H ALDDI++SIMELK Y+E FK
Sbjct: 128 HYRNLDVSTIKELARRWKPELLGEI-KKKSSHLALDDIKDSIMELKVYQEKFFKV 181
>gi|16273602|ref|NP_439857.1| oligoribonuclease [Haemophilus influenzae Rd KW20]
gi|260581056|ref|ZP_05848878.1| oligoribonuclease [Haemophilus influenzae RdAW]
gi|1176352|sp|P45340.1|ORN_HAEIN RecName: Full=Oligoribonuclease
gi|1574570|gb|AAC23360.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092296|gb|EEW76237.1| oligoribonuclease [Haemophilus influenzae RdAW]
Length = 182
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL +++ S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|195503017|ref|XP_002098476.1| GE23924 [Drosophila yakuba]
gi|194184577|gb|EDW98188.1| GE23924 [Drosophila yakuba]
Length = 184
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 109/174 (62%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+ILE++CIITD L EGP I+ +E D+M EWC+ HH
Sbjct: 11 IVWMDLEMTGLDIEKDKILEVSCIITDKDLNVKSEGPCFAINHPQEVYDTMNEWCKEHHY 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S + +A ++ +++ NV L GNSVY+D +FL+K+MP +
Sbjct: 71 KSGLVDRCKSSDVKPEQASNLLLSYLEMNVPKRACPLGGNSVYMDRLFLRKFMPLVDDYL 130
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK L RW P+ P K HR+LDDI ESI ELKYYK N FK
Sbjct: 131 HYRIVDVSTIKELAKRWRPKVLTSAPKKSVAHRSLDDILESINELKYYKANFFK 184
>gi|302681013|ref|XP_003030188.1| hypothetical protein SCHCODRAFT_57864 [Schizophyllum commune H4-8]
gi|300103879|gb|EFI95285.1| hypothetical protein SCHCODRAFT_57864 [Schizophyllum commune H4-8]
Length = 208
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 117/190 (61%), Gaps = 5/190 (2%)
Query: 58 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKEC 117
NS +PL ++ P+VW+D EMTGL D+I+EIA +IT+G L EG + +I K
Sbjct: 7 NSLSPLAYD-DGPIVWVDCEMTGLDHNKDKIIEIAVLITNGNLEIVDEGVEYIIRTDKSV 65
Query: 118 LDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDF 176
LD M EWC H SGLT L S T AE V+ +++K V T T +LAGNSV+VD
Sbjct: 66 LDGMDEWCTTQHGKSGLTAACLASPHTTSSAESAVLAYIQKWVPTQRTAVLAGNSVHVDR 125
Query: 177 MFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPS-KEQKHRALDDIRESIMEL 235
MFL MP L + ++DVSSIK L RWYP+ VP E HRALDDI+ SI EL
Sbjct: 126 MFLANEMPRLVDWLHYRIIDVSSIKELARRWYPQ--IPVPKLSESSHRALDDIKGSIAEL 183
Query: 236 KYYKENIFKT 245
++Y+ENIFK
Sbjct: 184 RWYRENIFKA 193
>gi|145633650|ref|ZP_01789377.1| oligoribonuclease [Haemophilus influenzae 3655]
gi|145635428|ref|ZP_01791129.1| oligoribonuclease [Haemophilus influenzae PittAA]
gi|229845250|ref|ZP_04465383.1| oligoribonuclease [Haemophilus influenzae 6P18H1]
gi|144985527|gb|EDJ92343.1| oligoribonuclease [Haemophilus influenzae 3655]
gi|145267302|gb|EDK07305.1| oligoribonuclease [Haemophilus influenzae PittAA]
gi|229811845|gb|EEP47541.1| oligoribonuclease [Haemophilus influenzae 6P18H1]
Length = 182
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 114/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLEPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGSSPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+++ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYRKHFMKLD 182
>gi|392920204|ref|NP_001256185.1| Protein C08B6.8, isoform a [Caenorhabditis elegans]
gi|7227907|sp|Q17819.1|ORN_CAEEL RecName: Full=Probable oligoribonuclease
gi|3874144|emb|CAA96590.1| Protein C08B6.8, isoform a [Caenorhabditis elegans]
Length = 193
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++WID EMTGL +E + EIA I+TD +L GPD+VIHQ KE LD+M EW +N
Sbjct: 15 IIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRNTFH 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL +K++ S + +AE +V++F+K + +AGNS+Y+D +F+KKYMP L
Sbjct: 75 ENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLDKFA 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RWYP DY+ P K+ HRA DDI ESI ELK Y+E+IF
Sbjct: 135 HYRCIDVSTIKGLVQRWYP-DYKH-PKKQCTHRAFDDIMESIAELKNYRESIF 185
>gi|392577290|gb|EIW70419.1| hypothetical protein TREMEDRAFT_29140 [Tremella mesenterica DSM
1558]
Length = 214
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 113/178 (63%), Gaps = 4/178 (2%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL D++LEIA IITDGKL EG D VI + LDSMGEWC H
Sbjct: 13 PLVWIDCEMTGLDATRDQLLEIAVIITDGKLNPVDEGIDYVIRTEEAVLDSMGEWCVEQH 72
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT L S T +E EK V E++ + + LLAG+SV++D FL +YMP +
Sbjct: 73 GKSGLTAACLSSPHTHQEVEKTVKEYIMRWIPEPGAGLLAGSSVHLDKAFLVRYMPSITD 132
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSK---EQKHRALDDIRESIMELKYYKENIF 243
S+ ++DVSSIK +C RWYP +K E HRALDDI+ SI ELK+Y+++IF
Sbjct: 133 HLSYRILDVSSIKEICRRWYPSIRKKESDSREGEVAHRALDDIQGSIRELKFYRDHIF 190
>gi|417842177|ref|ZP_12488272.1| Oligoribonuclease [Haemophilus haemolyticus M19501]
gi|341947957|gb|EGT74598.1| Oligoribonuclease [Haemophilus haemolyticus M19501]
Length = 182
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKGSKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P K+ H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKDNTHLALDDIRESIKELAYYREHFMKLD 182
>gi|290998255|ref|XP_002681696.1| predicted protein [Naegleria gruberi]
gi|284095321|gb|EFC48952.1| predicted protein [Naegleria gruberi]
Length = 185
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 114/177 (64%), Gaps = 4/177 (2%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
P+VW+D+EMTGL I+ D ILEIA IITDG L + L++HQ+ LD+M +WC+ HH
Sbjct: 9 PIVWVDMEMTGLDIDSDHILEIAVIITDGNLNIIAQLDSLIVHQSDSVLDNMNDWCKQHH 68
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT--YTPLLAGNSVYVDFMFLKKYMPDLA 187
SGLT V S + ++ E V++FVK V + P LAGNSVY D +F+KK M L
Sbjct: 69 GDSGLTAAVRKSSFSIQQVEDTVLDFVKHYVASERLAP-LAGNSVYCDRLFMKKEMKRLD 127
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVSSIK L RW P KV K HRALDDI+ESI ELK YK+++FK
Sbjct: 128 EYLHYRIIDVSSIKELARRWSPETLTKVV-KTGAHRALDDIKESIEELKVYKKHLFK 183
>gi|418465483|ref|ZP_13036419.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359755964|gb|EHK90124.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 182
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ E L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIHQPDELLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LT+R AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTANGLIERVKASKLTKRAAELQTLDFLKKYVPKGASPICGNSVAQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P D +K+ H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKP-DILNGFNKQNTHLALDDIRESIKELAYYREHFLKMD 182
>gi|195054679|ref|XP_001994252.1| GH11306 [Drosophila grimshawi]
gi|193896122|gb|EDV94988.1| GH11306 [Drosophila grimshawi]
Length = 187
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K+ +VW+DLEMTGL I D+ILE++CIITD L EGP I + D+M EWC
Sbjct: 11 KLDIVWMDLEMTGLDINTDQILELSCIITDKHLNIKSEGPSFAIRHPQHVYDNMNEWCMK 70
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
HH SGL + S +T E V+ ++K+N+ LAGNS+Y+D +F+ K+ P +
Sbjct: 71 HHYESGLVDRCKESNVTPELVENIVLSYLKENIPQGQCPLAGNSIYMDRLFINKFYPAVD 130
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS+ K L RWYP + P K HR+L DI+ESI ELKYYKE++FK
Sbjct: 131 KYLLYRIIDVSTTKELATRWYPDVSKATPRKMLAHRSLSDIKESIAELKYYKEHLFK 187
>gi|419839091|ref|ZP_14362509.1| oligoribonuclease [Haemophilus haemolyticus HK386]
gi|386909802|gb|EIJ74466.1| oligoribonuclease [Haemophilus haemolyticus HK386]
Length = 182
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNYWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKTSKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|387121959|ref|YP_006287842.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415759030|ref|ZP_11481680.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D17P-3]
gi|416032289|ref|ZP_11572770.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
gi|416046112|ref|ZP_11575594.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
gi|416070141|ref|ZP_11583566.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
gi|429732661|ref|ZP_19267256.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans Y4]
gi|347994818|gb|EGY36060.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
gi|347999213|gb|EGY40064.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
gi|348000219|gb|EGY41011.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
gi|348655146|gb|EGY70623.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D17P-3]
gi|385876451|gb|AFI88010.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429155580|gb|EKX98246.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans Y4]
Length = 182
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ E L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIHQPDELLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LTER AE Q ++F+KK V T + GNSV D FL KYMP+LA
Sbjct: 65 THMANGLIERVKASKLTERAAELQTLDFLKKYVPKGTSPICGNSVAQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW D +K+ H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARW-KADILNGFNKQNTHLALDDIRESIKELAYYREHFLKMD 182
>gi|254360517|ref|ZP_04976666.1| exoribonuclease II [Mannheimia haemolytica PHL213]
gi|261492357|ref|ZP_05988919.1| exoribonuclease II [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496143|ref|ZP_05992551.1| exoribonuclease II [Mannheimia haemolytica serotype A2 str. OVINE]
gi|452744765|ref|ZP_21944606.1| oligoribonuclease [Mannheimia haemolytica serotype 6 str. H23]
gi|153091057|gb|EDN73062.1| exoribonuclease II [Mannheimia haemolytica PHL213]
gi|261308245|gb|EEY09540.1| exoribonuclease II [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312040|gb|EEY13181.1| exoribonuclease II [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452087183|gb|EME03565.1| oligoribonuclease [Mannheimia haemolytica serotype 6 str. H23]
Length = 184
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 114/178 (64%), Gaps = 1/178 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQT + L+ M +WC H
Sbjct: 8 LIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAVHQTDDLLEKMSDWCVKTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GL ++V S LTER AE Q ++F+K+ V + GNS+ D FL KYMPDLA F
Sbjct: 68 ANGLIERVKASKLTERAAELQTLDFLKRWVPKGASPICGNSIAQDKRFLYKYMPDLADYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLK 248
+ +DVS++K L RW P K SK H ALDDIRESI ELK+Y+E+ + + K
Sbjct: 128 HYRHLDVSTLKELARRWKPEILDKF-SKGNTHLALDDIRESINELKFYREHFIQLDQK 184
>gi|94500535|ref|ZP_01307066.1| oligoribonuclease [Bermanella marisrubri]
gi|94427325|gb|EAT12304.1| oligoribonuclease [Bermanella marisrubri]
Length = 185
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ DRI+EIA I+TD +L EGP L IHQ +++M EW
Sbjct: 9 KHNLIWIDLEMTGLEPAQDRIIEIATIVTDSELNVLAEGPVLAIHQPDSLMNNMDEWNTR 68
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLTK+V S + E+EA KQ + F+++ VG + GNSV+ D FL KYMP+L
Sbjct: 69 THGNSGLTKRVKESDIDEQEAVKQTIAFLQQYVGKGVSPMCGNSVHQDRRFLNKYMPELE 128
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L RW P + + K+ H+ALDDIRESI EL+YY+E++
Sbjct: 129 DFFHYRNLDVSTLKELARRWAPEKLKGL-QKKGAHQALDDIRESIEELRYYREHLM 183
>gi|167854572|ref|ZP_02477353.1| oligoribonuclease [Haemophilus parasuis 29755]
gi|167854327|gb|EDS25560.1| oligoribonuclease [Haemophilus parasuis 29755]
Length = 183
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA IITD L EGP L +HQ E L+ M EWC
Sbjct: 6 KQNLIWIDLEMTGLDPEKERIIEIATIITDKDLNILAEGPVLAVHQPDELLNKMSEWCVK 65
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 66 THTANGLVERVKQSKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLYKYMPDLA 125
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L RW P ++ SK+ H ALDDI+ESI ELK+Y+ +
Sbjct: 126 DYFHYRHLDVSTLKELASRWKPEMLKQF-SKKNSHLALDDIKESIEELKFYRHHFI 180
>gi|410447007|ref|ZP_11301109.1| oligoribonuclease [SAR86 cluster bacterium SAR86E]
gi|409979994|gb|EKO36746.1| oligoribonuclease [SAR86 cluster bacterium SAR86E]
Length = 181
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL +RI+EIA IITD LT EGP+LVI+Q KE +++M EW H
Sbjct: 10 LIWIDLEMTGLDPNKERIIEIATIITDSNLTIVAEGPNLVINQPKELIENMDEWNTKQHG 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK VL S ++E+ AE + +EF+ K VG + GN+V D FL KYMP L S F
Sbjct: 70 NSGLTKSVLQSSISEQAAEIETLEFISKYVGNKASPMCGNTVSHDRRFLAKYMPALESYF 129
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSS+K L RW + + K+ HRA DDI+ESI EL+ YK+ +F
Sbjct: 130 HYRHVDVSSVKELISRWM--NDAQTYEKQGSHRAKDDIKESINELRLYKQMLF 180
>gi|392310119|ref|ZP_10272653.1| oligoribonuclease [Pseudoalteromonas citrea NCIMB 1889]
Length = 181
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + D+ILEIA +ITDG L EGP + +HQ+ E LD M EWC N H
Sbjct: 8 LIWLDLEMTGLEPKTDKILEIATVITDGDLNILAEGPVIAVHQSDELLDGMDEWCTNQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S TE +A KQ ++F+K V + GNS+ D FL KYMP+L + F
Sbjct: 68 RSGLTARCKASKFTEEDAIKQTLDFLKAWVPPAKSPMCGNSIGQDRRFLNKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P + V +K+ H ALDDI++SIMELK Y++ F
Sbjct: 128 HYRNLDVSTVKELARRWKPELLKDV-TKKSSHLALDDIKDSIMELKVYQQKFF 179
>gi|37200012|dbj|BAC95841.1| oligoribonuclease [Vibrio vulnificus YJ016]
Length = 227
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 16/207 (7%)
Query: 38 SVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITD 97
S SK NSS + + +N L+WIDLEMTGL +V +I+EIA I+TD
Sbjct: 36 SFSSKQIGNSSMSFSDQN---------------LIWIDLEMTGLDPDVHKIIEIASIVTD 80
Query: 98 GKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVK 157
+L EGP L IHQ++E L M EWC N H SGL ++V S +TE+EA +Q + F++
Sbjct: 81 SELNILAEGPVLAIHQSEEELAKMDEWCTNTHTGSGLVERVRGSQITEQEAVEQTIAFLE 140
Query: 158 KNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPS 217
K V + GNS+ D FL ++MP+L F + +DVS++K L RW P + K S
Sbjct: 141 KWVPKGVSPICGNSIGQDRRFLYRHMPELEGYFHYRYIDVSTLKELTRRWNP-EVLKGFS 199
Query: 218 KEQKHRALDDIRESIMELKYYKENIFK 244
K+ H ALDDIRESI ELK+Y++ IFK
Sbjct: 200 KQGTHLALDDIRESIAELKFYRQTIFK 226
>gi|441514286|ref|ZP_20996106.1| oligoribonuclease [Gordonia amicalis NBRC 100051]
gi|441450846|dbj|GAC54067.1| oligoribonuclease [Gordonia amicalis NBRC 100051]
Length = 199
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TDG L +G D+VIH E L SM + H
Sbjct: 5 LVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDEALASMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAEK V+++++K+V T + LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTDEVRKSTVTLAEAEKMVLDYIRKHVTTPGAVPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPRVYFGQPEKGLAHRALADIRESIRELRYYRAAAF 178
>gi|195449894|ref|XP_002072273.1| GK22765 [Drosophila willistoni]
gi|194168358|gb|EDW83259.1| GK22765 [Drosophila willistoni]
Length = 190
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 111/174 (63%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL I+ D+ILE++C+ITD L G I+ +E + M EWC H
Sbjct: 17 MVWMDLEMTGLDIQKDKILEVSCLITDKDLNIQSNGLSFAINHPQEVYEQMNEWCIKQHY 76
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL S +T AE ++ ++K+N+ T +LAGNSVY+D +FL KYMP +
Sbjct: 77 ASGLVDSCKKSTVTPEAAEDLILTYLKQNIPEKTCVLAGNSVYMDRLFLYKYMPIVNKYL 136
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK L RW P K P K HR+LDDI++SI ELK+YKE++FK
Sbjct: 137 HYRIVDVSTIKELARRWNPDIIEKAPKKAFAHRSLDDIKDSIAELKFYKEHLFK 190
>gi|409043944|gb|EKM53426.1| hypothetical protein PHACADRAFT_259806 [Phanerochaete carnosa
HHB-10118-sp]
Length = 206
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
TPL F PLVW+D EMTGL + DRI+EIA +IT+G L EG + +I K LDS
Sbjct: 4 TPLNFAAG-PLVWVDCEMTGLNHKTDRIIEIAVLITNGNLELVDEGLEYIIRTDKANLDS 62
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFL 179
M EWC N H SGLT L S + K+V+ ++KK + +LAG++V+ D +FL
Sbjct: 63 MDEWCTNQHGKSGLTAACLGSPHSTEFVAKEVLAYIKKWIPEQRVGVLAGSTVHFDKVFL 122
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPR-DYRKVPSKEQKHRALDDIRESIMELKYY 238
+ MP++ + + +VDVSSIK LC RWYP+ +K E HRALDDIR SI ELK+Y
Sbjct: 123 AEQMPEVVNWLHYRIVDVSSIKELCRRWYPKLTPQKSAPNEIAHRALDDIRSSIRELKWY 182
Query: 239 KENIF 243
+ENIF
Sbjct: 183 RENIF 187
>gi|403368109|gb|EJY83886.1| Oligoribonuclease [Oxytricha trifallax]
Length = 206
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
P+VWIDLEMTGL ++ ++ILEI +ITD KLTK V GP++++ + L M +W Q HH
Sbjct: 27 PIVWIDLEMTGLNVQFEKILEIGIVITDSKLTKKVLGPNIIVQCDEYTLQHMDDWNQTHH 86
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLAS 188
+ SGL +V S ++ +AE+ ++ F+++ TY + LAGN ++ D F++KYMP+L
Sbjct: 87 KESGLLAQVRQSNVSLEQAEQIILAFLQEMQVTYQSAPLAGNCIHTDRKFMRKYMPNLVD 146
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
++ ++DV++ K LC RW + + P K Q HRALDDI ESI E+KYY++ K
Sbjct: 147 YLNYKIIDVTTFKQLCWRWNQQVSKGRPRKAQGHRALDDILESIEEMKYYQDKFIK 202
>gi|195145416|ref|XP_002013689.1| GL24271 [Drosophila persimilis]
gi|198452116|ref|XP_001358637.2| GA10162 [Drosophila pseudoobscura pseudoobscura]
gi|194102632|gb|EDW24675.1| GL24271 [Drosophila persimilis]
gi|198131794|gb|EAL27778.2| GA10162 [Drosophila pseudoobscura pseudoobscura]
Length = 187
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL ++ D+ILE++CIITD L EGP I+ ++ +M EWC HH
Sbjct: 14 LVWMDLEMTGLDVDTDKILEVSCIITDKDLNIKSEGPCFAINYPEDVYKNMNEWCIKHHN 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S +T +A V+ +++KN+ LAG+SVY+D +F++KYM +
Sbjct: 74 ESGLIDRCRSSDVTPDKAGDLVMSYLQKNIPKGKCPLAGSSVYMDRLFIRKYMSPVNEYL 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK L RWYP + P K HR+LDDI ESI ELKYYKE++FK
Sbjct: 134 HYRIVDVSTIKELAKRWYPDIAKAAPRKVFAHRSLDDIMESIQELKYYKEHLFK 187
>gi|444336987|ref|ZP_21151066.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
gi|443543543|gb|ELT53744.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
Length = 245
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ E L+ M EWC
Sbjct: 68 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIHQPDELLNKMSEWCVK 127
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LTER AE Q ++F+KK V T + GNSV D FL KYMP+LA
Sbjct: 128 THMANGLIERVKASKLTERAAELQTLDFLKKYVPKGTSPICGNSVAQDKRFLFKYMPELA 187
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW D +K+ H ALDDIRESI EL YY+E+ K +
Sbjct: 188 DYFHYRHLDVSTLKELAARW-KADILNGFNKQNTHLALDDIRESIKELAYYREHFLKMD 245
>gi|401411143|ref|XP_003885019.1| Oligoribonuclease, related [Neospora caninum Liverpool]
gi|325119438|emb|CBZ54991.1| Oligoribonuclease, related [Neospora caninum Liverpool]
Length = 342
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 117/182 (64%), Gaps = 7/182 (3%)
Query: 66 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWC 125
E + P+VWID EMTGL +E D+I+EIA I+TDG+ + + GP L+IH + + LD M EWC
Sbjct: 162 ELQAPIVWIDCEMTGLDVERDQIIEIAVIVTDGQCRRRIVGPHLIIHASDKLLDGMDEWC 221
Query: 126 QNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMP 184
+ H SGLT S T +AE+++++FV ++V T L GNSV+VD FL K MP
Sbjct: 222 KKTHGNSGLTAACRQSTTTLADAEEKILDFVSRHVATTRVAPLGGNSVHVDRQFLTKQMP 281
Query: 185 DLASLFSHVLVDVSSIKALCMRWYPRDYRKVP--SKEQKHRALDDIRESIMELKYYKENI 242
L + S+ ++DVS++K L RW P ++P K HRALDDI SI EL YY +++
Sbjct: 282 RLIAHLSYRIIDVSTVKELAKRWKP----ELPFFEKANNHRALDDIHASIDELLYYSQHL 337
Query: 243 FK 244
F+
Sbjct: 338 FR 339
>gi|88800702|ref|ZP_01116261.1| oligoribonuclease [Reinekea blandensis MED297]
gi|88776566|gb|EAR07782.1| oligoribonuclease [Reinekea sp. MED297]
Length = 182
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 111/179 (62%), Gaps = 1/179 (0%)
Query: 65 FEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEW 124
E K L+WIDLEMTGL E D+ILEIA I+TD L EGP LVIHQ+ LD M EW
Sbjct: 1 MEKKSNLIWIDLEMTGLNPETDQILEIATIVTDKDLNVLAEGPSLVIHQSDAVLDGMDEW 60
Query: 125 CQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMP 184
C HH SGLT+KV +S ++ +AE + + FV++ V L GNS++ D FL +YMP
Sbjct: 61 CTTHHGESGLTEKVRNSSISVAQAEAETLAFVEQWVEPGCSPLCGNSIWQDRRFLIRYMP 120
Query: 185 DLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
L S + +DVS++K L RW P V K HRALDDI+ESI EL YY+++
Sbjct: 121 ALDSYCHYRNIDVSTLKELAARWRPELLNGV-KKAGSHRALDDIKESIAELAYYRDSFM 178
>gi|312199001|ref|YP_004019062.1| exonuclease RNase T and DNA polymerase III [Frankia sp. EuI1c]
gi|311230337|gb|ADP83192.1| Exonuclease RNase T and DNA polymerase III [Frankia sp. EuI1c]
Length = 238
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 110/175 (62%), Gaps = 3/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D +LE+AC++TDG+L +G DLVI L++M ++ H
Sbjct: 16 LVWIDCEMTGLDPASDVLLEVACLVTDGELNVVGDGVDLVISAPDPVLETMVPVVRDMHA 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT+ V S LT EAE+QV+ +V+ V PL GNS+ D FL +YMP+L S
Sbjct: 76 TSGLTEAVRASTLTVAEAEQQVLAYVRTLVPENRRAPL-CGNSIATDRTFLARYMPELDS 134
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSS+K L RWYPR Y P+K HRAL DIRESI EL+YY+ +F
Sbjct: 135 YLHYRMIDVSSVKELARRWYPRAYYAAPAKRGGHRALADIRESIEELRYYRRTVF 189
>gi|120555687|ref|YP_960038.1| oligoribonuclease [Marinobacter aquaeolei VT8]
gi|387815064|ref|YP_005430551.1| oligoribonuclease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166216266|sp|A1U4D2.1|ORN_MARAV RecName: Full=Oligoribonuclease
gi|120325536|gb|ABM19851.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
gi|381340081|emb|CCG96128.1| oligoribonuclease [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 180
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+E+A IITD +L EGP + IHQ L+ M EWC H
Sbjct: 7 LIWIDLEMTGLDPEQERIIEMASIITDSQLNIVAEGPVIAIHQPDSLLEQMDEWCTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT++V S ++E EAE+Q +EF+ K++ L GNS+ D FL KYMP L + F
Sbjct: 67 ASGLTQRVKESTISEAEAEQQTLEFLGKHLEPGQSPLCGNSIGQDRRFLVKYMPKLEAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D + K+ H ALDDIR+SI EL++Y+++ FK
Sbjct: 127 HYRNLDVSTVKELARRWRP-DVLEGVKKQGSHLALDDIRDSINELRHYRDHFFK 179
>gi|406941429|gb|EKD73922.1| hypothetical protein ACD_45C00142G0003 [uncultured bacterium]
Length = 185
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WID+EMTGL E +RI+EIA I+TD L EGP IHQ+ E L+SM W H
Sbjct: 8 LIWIDMEMTGLDPEKERIIEIATIVTDSNLNILAEGPVFAIHQSNELLNSMDNWNTKQHN 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL +V S +TE +AE + F+K+ V + GNSV+ D FL +YMP+L F
Sbjct: 68 SSGLVARVKASTVTEADAEMATLNFLKQYVPAGKSPMCGNSVHQDRRFLYRYMPELEKHF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ L+DVS++K L +RW P+ Y V K+ KH ALDDIRESI ELKYY+ ++
Sbjct: 128 HYRLIDVSTLKELALRWAPKVYGGV-QKDSKHLALDDIRESIEELKYYRAHLL 179
>gi|377568453|ref|ZP_09797641.1| oligoribonuclease [Gordonia terrae NBRC 100016]
gi|377534341|dbj|GAB42806.1| oligoribonuclease [Gordonia terrae NBRC 100016]
Length = 199
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TDG L +G D+VIH L SM + H
Sbjct: 5 LVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDAALASMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
ASGLT++V S +T EAEK V+++++K+V T + LAGNS+ D F+ + MP+L +
Sbjct: 65 ASGLTEEVRASTVTLAEAEKLVLDYIRKHVTTAGAVPLAGNSIATDRGFITRDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYP+ Y P K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPKVYFGQPEKGLAHRALADIRESIRELRYYRAAAF 178
>gi|242014597|ref|XP_002427973.1| oligoribonuclease, putative [Pediculus humanus corporis]
gi|212512472|gb|EEB15235.1| oligoribonuclease, putative [Pediculus humanus corporis]
Length = 196
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 72 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEA 131
+WIDLEMTGL E D ILE+ACIIT+ L EG VIHQ L SM EWC HHE
Sbjct: 24 IWIDLEMTGLNPETDTILEVACIITEPDLNPLNEGMHFVIHQNDNVLKSMNEWCLVHHEK 83
Query: 132 SGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S + ++ E+++ ++K N T LAGNSVY+D +FLKKYMP + +
Sbjct: 84 SGLISESRASPHSLKDVEEKLFNYIKSNTFIDGTNYLAGNSVYMDLLFLKKYMPSIPTFL 143
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ L+DVSS+K LC WY + + KE HRALDDI+ SI ELK YK FK
Sbjct: 144 HYRLIDVSSLKVLCNHWYSYELKNC-KKEVSHRALDDIKNSIQELKTYKNIAFK 196
>gi|229847336|ref|ZP_04467438.1| oligoribonuclease [Haemophilus influenzae 7P49H1]
gi|229809761|gb|EEP45485.1| oligoribonuclease [Haemophilus influenzae 7P49H1]
Length = 182
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 111/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ E +RI+EIA I+TD L EGP L +HQ L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLEPEKERIIEIATIVTDKNLNILAEGPVLAVHQPDGLLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|145631577|ref|ZP_01787343.1| oligoribonuclease [Haemophilus influenzae R3021]
gi|144982777|gb|EDJ90303.1| oligoribonuclease [Haemophilus influenzae R3021]
Length = 182
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQPDGLLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILESF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>gi|229047208|ref|NP_935870.2| oligoribonuclease [Vibrio vulnificus YJ016]
gi|229220645|ref|NP_760214.2| oligoribonuclease [Vibrio vulnificus CMCP6]
gi|320155081|ref|YP_004187460.1| 3'-to-5' oligoribonuclease [Vibrio vulnificus MO6-24/O]
gi|29611786|sp|Q8DCV6.2|ORN_VIBVU RecName: Full=Oligoribonuclease
gi|41017432|sp|Q7MGZ7.2|ORN_VIBVY RecName: Full=Oligoribonuclease
gi|319930393|gb|ADV85257.1| 3'-to-5' oligoribonuclease (orn) [Vibrio vulnificus MO6-24/O]
gi|319999184|gb|AAO09741.2| Oligoribonuclease [Vibrio vulnificus CMCP6]
Length = 181
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL +V +I+EIA I+TD +L EGP L IHQ++E L M EWC N H
Sbjct: 8 LIWIDLEMTGLDPDVHKIIEIASIVTDSELNILAEGPVLAIHQSEEELAKMDEWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +TE+EA +Q + F++K V + GNS+ D FL ++MP+L F
Sbjct: 68 GSGLVERVRGSQITEQEAVEQTIAFLEKWVPKGVSPICGNSIGQDRRFLYRHMPELEGYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K SK+ H ALDDIRESI ELK+Y++ IFK
Sbjct: 128 HYRYIDVSTLKELTRRWNP-EVLKGFSKQGTHLALDDIRESIAELKFYRQTIFK 180
>gi|416891596|ref|ZP_11923143.1| oligoribonuclease [Aggregatibacter aphrophilus ATCC 33389]
gi|347815144|gb|EGY31784.1| oligoribonuclease [Aggregatibacter aphrophilus ATCC 33389]
Length = 181
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ E L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQPDELLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S L ER AE Q ++F+KK V T + GNSV D FL KYMP+LA
Sbjct: 65 THTANGLVERVKASKLNERAAELQTLDFLKKYVPKGTSPICGNSVAQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L RW P +K+ H ALDDIRESI EL YY+E+
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILNGF-TKQNTHLALDDIRESIKELAYYREHFL 179
>gi|195331405|ref|XP_002032393.1| GM23540 [Drosophila sechellia]
gi|194121336|gb|EDW43379.1| GM23540 [Drosophila sechellia]
Length = 184
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 105/174 (60%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+ILE+ACIITD L EG I+ +E DSM EWC H
Sbjct: 11 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGACFAINHPQEVYDSMNEWCMEQHY 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S + EA V+ +++KN+ L GNSVY D +F+ K+MP +
Sbjct: 71 KSGLIDRCKSSDVKPEEASNLVLSYIEKNIPKGVCPLGGNSVYTDRLFIMKFMPLVNDYL 130
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK L RW P P K HR+LDDIRESI EL YYK N+FK
Sbjct: 131 HYRIVDVSTIKELAKRWRPEILASAPKKLFTHRSLDDIRESIKELAYYKANLFK 184
>gi|336325168|ref|YP_004605134.1| oligoribonuclease [Corynebacterium resistens DSM 45100]
gi|336101150|gb|AEI08970.1| oligoribonuclease [Corynebacterium resistens DSM 45100]
Length = 215
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 113/185 (61%), Gaps = 3/185 (1%)
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
TP + +VW+D EMTGL + ++EIA I+TD L EG DLVIH T + L
Sbjct: 9 TPNQIAKNDRIVWVDCEMTGLDPDQHVLVEIAVIVTDANLNALAEGIDLVIHATDDELSR 68
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMF 178
M ++ H SGLT ++ S L+ EAE+QVVE++K+ V G PL AGNS+ D F
Sbjct: 69 MDDFVTKMHNNSGLTNQIKESSLSLAEAEQQVVEYIKQFVPLGRTAPL-AGNSIATDRTF 127
Query: 179 LKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYY 238
+ +YMP+L + ++DVSSIK L RWYPR Y PSK HRAL DI+ESI EL YY
Sbjct: 128 IARYMPELNEYLHYRMIDVSSIKELARRWYPRVYNGQPSKGLAHRALADIKESIRELAYY 187
Query: 239 KENIF 243
+ +F
Sbjct: 188 RAALF 192
>gi|363423395|ref|ZP_09311461.1| oligoribonuclease [Rhodococcus pyridinivorans AK37]
gi|359731854|gb|EHK80887.1| oligoribonuclease [Rhodococcus pyridinivorans AK37]
Length = 210
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++EIA ++TD L EG D+VIH + L M E Q HE
Sbjct: 16 LVWIDCEMTGLRLGSDKLIEIAALVTDSDLNVLGEGVDIVIHADDDALADMPEVVQQMHE 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S ++ EAEKQV+ +++++V T LAGNS+ D F+ + MP+L +
Sbjct: 76 RSGLTEEVRRSTVSLAEAEKQVLAYIREHVTEAGTAPLAGNSIATDRAFITRDMPELDNY 135
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 136 LHYRMVDVSSIKELCRRWYPRIYFGQPEKGLSHRALADIKESIRELRYYRRTAF 189
>gi|358460735|ref|ZP_09170913.1| Oligoribonuclease [Frankia sp. CN3]
gi|357075501|gb|EHI84984.1| Oligoribonuclease [Frankia sp. CN3]
Length = 237
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D +LE+AC++TDG L +G DLVI + L++M N HE
Sbjct: 4 LVWIDCEMTGLDPASDVLLEVACLVTDGDLNVVGDGLDLVIAAPEAALEAMVPVVTNMHE 63
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT V S L+ EAE+QV+ +V+ V PL GNS+ D FL +YMP+L
Sbjct: 64 TSGLTAAVRASTLSVAEAERQVLAYVRALVPENRRAPL-CGNSIATDRSFLARYMPELDG 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSS+K L RWYPR Y P+K HRAL DIRESI EL+YY+ +F
Sbjct: 123 YLHYRMIDVSSVKELARRWYPRAYYAAPAKRGGHRALADIRESIEELRYYRRTVF 177
>gi|407716818|ref|YP_006838098.1| exonuclease RNase T and DNA polymerase III [Cycloclasticus sp. P1]
gi|407257154|gb|AFT67595.1| Exonuclease RNase T and DNA polymerase III [Cycloclasticus sp. P1]
Length = 182
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 116/177 (65%), Gaps = 1/177 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ D I+EIA I+TD +L +GP L + QTK+ +D+M +W Q
Sbjct: 5 KQNLIWIDLEMTGLEPASDSIIEIATIVTDKELNVLAQGPVLAVRQTKQTMDAMDDWNQQ 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
HH SGL ++VL S L+ER+AE+Q +EF++K V + GNS+ D F+ YMP L
Sbjct: 65 HHGQSGLIERVLKSSLSERDAEQQTIEFLEKWVPQGASPMCGNSICQDRRFMANYMPTLE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P + K K+ H+ALDD+ ESI ELKYY+E+ K
Sbjct: 125 AFFHYRNLDVSTLKELAGRWAP-EIMKGFKKKATHQALDDVIESIEELKYYREHFIK 180
>gi|251792379|ref|YP_003007105.1| oligoribonuclease [Aggregatibacter aphrophilus NJ8700]
gi|422335937|ref|ZP_16416910.1| oligoribonuclease [Aggregatibacter aphrophilus F0387]
gi|247533772|gb|ACS97018.1| oligoribonuclease [Aggregatibacter aphrophilus NJ8700]
gi|353346123|gb|EHB90408.1| oligoribonuclease [Aggregatibacter aphrophilus F0387]
Length = 181
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ E L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQPDELLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S L ER AE Q + F+KK V T + GNSV D FL KYMP+LA
Sbjct: 65 THTANGLVERVKMSKLNERAAELQTLGFLKKYVPKGTSPICGNSVAQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L RW P SK+ H ALDDIRESI EL YY+E+
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILNGF-SKQNTHLALDDIRESIKELAYYREHFL 179
>gi|416050979|ref|ZP_11577185.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
gi|347993503|gb|EGY34858.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
Length = 182
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIHQPDALLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LT+R AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTANGLIERVKASKLTKRAAELQTLDFLKKYVPKGASPICGNSVAQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P D +K+ H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKP-DILNGFNKQNTHLALDDIRESIKELAYYREHFLKMD 182
>gi|392561312|gb|EIW54494.1| ribonuclease H-like protein [Trametes versicolor FP-101664 SS1]
Length = 226
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL DRI+EIA +IT+G L EG +I KE LD MG+WCQ+ H
Sbjct: 37 PLVWIDCEMTGLDPRTDRIIEIAVLITNGNLEVMDEGVSYIIRTDKEVLDKMGDWCQDTH 96
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGLT+ L S T+ E+QV+ ++K+ + T +LAGNSV++D FL MP +
Sbjct: 97 GASGLTEACLDSPYTKDFVEQQVLNYIKRWIPKDRTGVLAGNSVHMDRAFLVGEMPSIVD 156
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK + RWY P +E HRALDDI+ SI EL++Y++N+F
Sbjct: 157 WLHYRIVDVSSIKEIARRWYRTSSPSTPYQEPAHRALDDIKGSIRELQWYRKNLF 211
>gi|441510361|ref|ZP_20992268.1| oligoribonuclease [Gordonia aichiensis NBRC 108223]
gi|441445496|dbj|GAC50229.1| oligoribonuclease [Gordonia aichiensis NBRC 108223]
Length = 199
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL +E D+++EIA ++TDG L +G D+VIH LDSM + H
Sbjct: 5 LVWIDCEMTGLDLEKDKLIEIAALVTDGDLNILGDGVDVVIHADDADLDSMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE V+++++K+V T + LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTDEVRRSTVTVPEAEAMVLDYIRKHVTTPGAVPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DIRESI EL+YY+ +F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPRIYFNQPEKGLAHRALADIRESIRELRYYRAAVF 178
>gi|359767924|ref|ZP_09271704.1| oligoribonuclease [Gordonia polyisoprenivorans NBRC 16320]
gi|378717428|ref|YP_005282317.1| olioribonuclease Orn [Gordonia polyisoprenivorans VH2]
gi|359314501|dbj|GAB24537.1| oligoribonuclease [Gordonia polyisoprenivorans NBRC 16320]
gi|375752131|gb|AFA72951.1| oliGPOLibonuclease Orn [Gordonia polyisoprenivorans VH2]
Length = 199
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++EIA ++TDG L +G D+VIH + L +M E Q H
Sbjct: 5 LVWIDCEMTGLELGSDKLIEIAALVTDGDLNILGDGVDVVIHADDDALAAMPEVVQKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
ASGLT++V S +T EAEK V+++++ + + LAGNS+ D F+ + MPDL S
Sbjct: 65 ASGLTEEVRRSTVTLAEAEKLVLDYLRTQISASGAVPLAGNSIATDRGFIARDMPDLDSF 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYP+ Y P K HRAL DIRESI EL YY+ F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPKIYFGQPEKGLAHRALADIRESIRELAYYRAAAF 178
>gi|262393026|ref|YP_003284880.1| oligoribonuclease [Vibrio sp. Ex25]
gi|451972992|ref|ZP_21926191.1| oligoribonuclease [Vibrio alginolyticus E0666]
gi|262336620|gb|ACY50415.1| oligoribonuclease [Vibrio sp. Ex25]
gi|451931061|gb|EMD78756.1| oligoribonuclease [Vibrio alginolyticus E0666]
Length = 181
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAIHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVERVRNSKISEQDAVAQTIEFLEKWVPKGASPICGNSIGQDRRFLYKHMPELEEFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS++K L RW P +K+ H ALDDIRESI ELKYY+ IFK
Sbjct: 128 HYRYVDVSTLKELARRWQPEVLNGF-TKQGTHLALDDIRESIAELKYYRGTIFK 180
>gi|19553671|ref|NP_601673.1| oligoribonuclease [Corynebacterium glutamicum ATCC 13032]
gi|62391312|ref|YP_226714.1| oligoribonuclease [Corynebacterium glutamicum ATCC 13032]
gi|23821913|sp|Q8NMU1.1|ORN_CORGL RecName: Full=Oligoribonuclease
gi|21325244|dbj|BAB99866.1| Oligoribonuclease (3'->5' exoribonuclease) [Corynebacterium
glutamicum ATCC 13032]
gi|41326653|emb|CAF21135.1| Oligoribonuclease (3'->5' exoribonuclease) [Corynebacterium
glutamicum ATCC 13032]
gi|385144567|emb|CCH25606.1| oligoribonuclease [Corynebacterium glutamicum K051]
Length = 219
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 1/188 (0%)
Query: 57 QNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
+N+ TP LVW+DLEMTGL ++ I+E+A ++TD L EG DLV+H T+E
Sbjct: 5 ENNTTPAVAARDDRLVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVHATEE 64
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVD 175
L M ++ N HE+SGLT+++ S +T +EAE V+ ++K+ P LAGNS+ D
Sbjct: 65 ELAQMDDFVTNMHESSGLTEQIRESAVTLKEAEDAVLALIEKHCDPAHPAPLAGNSIATD 124
Query: 176 FMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMEL 235
F++++MP L + +VDVSS+K L RWYPR Y K P K HRAL DI ESI EL
Sbjct: 125 RAFIREHMPRLDEALHYRMVDVSSVKELARRWYPRVYYKQPEKGLAHRALADIVESIREL 184
Query: 236 KYYKENIF 243
YY+ + F
Sbjct: 185 DYYRRSFF 192
>gi|386743733|ref|YP_006216912.1| oligoribonuclease [Providencia stuartii MRSN 2154]
gi|384480426|gb|AFH94221.1| oligoribonuclease [Providencia stuartii MRSN 2154]
Length = 180
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L +GP + +HQT+ LD M EW N H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDSQLNILAQGPVIAVHQTQAQLDLMDEWNVNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S +EREAE +EF+++ V + GNSV D FL +YMP+L S F
Sbjct: 68 ASGLVERVKSSTFSEREAELATIEFLEQWVPKGASPICGNSVGQDRRFLFRYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+ALDDIRESI EL YY+E K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKKGTHQALDDIRESIAELAYYRETFIK 180
>gi|188026358|ref|ZP_02961799.2| hypothetical protein PROSTU_03865 [Providencia stuartii ATCC 25827]
gi|188020096|gb|EDU58136.1| oligoribonuclease [Providencia stuartii ATCC 25827]
Length = 181
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L +GP + +HQT+ LD M EW N H
Sbjct: 9 LIWIDLEMTGLDPERDRIIEIATIVTDSQLNILAQGPVIAVHQTQAQLDLMDEWNVNTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S +EREAE +EF+++ V + GNSV D FL +YMP+L S F
Sbjct: 69 ASGLVERVKSSTFSEREAELATIEFLEQWVPKGASPICGNSVGQDRRFLFRYMPELESYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+ALDDIRESI EL YY+E K
Sbjct: 129 HYRYLDVSTLKELARRWKPEILAGF-TKKGTHQALDDIRESIAELAYYRETFIK 181
>gi|269966857|ref|ZP_06180930.1| oligoribonuclease [Vibrio alginolyticus 40B]
gi|269828524|gb|EEZ82785.1| oligoribonuclease [Vibrio alginolyticus 40B]
Length = 219
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ +E L M +WC N H
Sbjct: 46 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAIHQPEEELAKMDDWCTNTHT 105
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 106 ASGLVERVRNSQISEQDAVAQTIEFLEKWVPKGASPICGNSIGQDRRFLYKHMPELEEFF 165
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS++K L RW P +K+ H ALDDIRESI ELKYY+ IFK
Sbjct: 166 HYRYVDVSTLKELARRWQPEVLNGF-TKQGTHLALDDIRESIAELKYYRGTIFK 218
>gi|260913837|ref|ZP_05920311.1| oligoribonuclease [Pasteurella dagmatis ATCC 43325]
gi|260631924|gb|EEX50101.1| oligoribonuclease [Pasteurella dagmatis ATCC 43325]
Length = 184
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 113/178 (63%), Gaps = 3/178 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L M EWC H
Sbjct: 8 LIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLRKMSEWCTKTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL ++V +S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA F
Sbjct: 68 ENGLVERVKNSKLTERAAELQTIDFLKKWVPKGVSPICGNSVSQDKRFLFKYMPELADYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLK 248
+ +DVS++K L RW P + K K+ H ALDDIRESI EL YY+E + NLK
Sbjct: 128 HYRHLDVSTLKELASRWKP-EVLKGFQKKNTHLALDDIRESIAELAYYRE--YFINLK 182
>gi|269964116|ref|ZP_06178417.1| oligoribonuclease [Vibrio harveyi 1DA3]
gi|424048107|ref|ZP_17785662.1| oligoribonuclease [Vibrio cholerae HENC-03]
gi|269831150|gb|EEZ85308.1| oligoribonuclease [Vibrio harveyi 1DA3]
gi|408883074|gb|EKM21865.1| oligoribonuclease [Vibrio cholerae HENC-03]
Length = 181
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVERVQNSQISEQDAVAQTIEFLEKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|170587529|ref|XP_001898528.1| Smfn protein [Brugia malayi]
gi|158594003|gb|EDP32594.1| Smfn protein, putative [Brugia malayi]
Length = 184
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 113/173 (65%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D EMTGL + I+EIAC IT+ L EG +LVI Q KE L+ M WC+
Sbjct: 10 IVWVDCEMTGLDVSSKTIVEIACAITEADLMVVEEGLNLVISQPKEVLEGMDNWCKATFA 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
++GL +++L S +T +EAE +++++V+++ + L GNSV D +FL+KYMP L
Sbjct: 70 SNGLLQEILSSKITMKEAENEILKYVRQHTDSGMCPLGGNSVGSDRIFLQKYMPTLEKHL 129
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSSIK L RWYP Y + P KE HRAL+DI ESI EL +YK+NIF
Sbjct: 130 HYRNIDVSSIKELVKRWYPDVYARKPQKENTHRALNDIYESIQELNWYKKNIF 182
>gi|33151672|ref|NP_873025.1| oligoribonuclease [Haemophilus ducreyi 35000HP]
gi|38372407|sp|Q7VNN8.1|ORN_HAEDU RecName: Full=Oligoribonuclease
gi|33147893|gb|AAP95414.1| oligoribonuclease [Haemophilus ducreyi 35000HP]
Length = 183
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA I+TD L +GP L +HQ L M EWC H
Sbjct: 9 LIWIDLEMTGLDPNQDRIIEIATIVTDKDLNILAKGPVLAVHQPNTLLSKMNEWCIKTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GL ++V S LTER AE Q ++F+K+ V + + GNSV D FL +YMPDLA F
Sbjct: 69 ANGLIERVKQSKLTERAAELQTLDFLKQWVMKGSSPICGNSVAQDKRFLYQYMPDLADYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P ++ SK+ H ALDDIRESI ELK+Y+E+ K
Sbjct: 129 HYRHLDVSTLKELARRWKPEILQQF-SKKNSHLALDDIRESIEELKFYREHFIK 181
>gi|326795802|ref|YP_004313622.1| oligoribonuclease [Marinomonas mediterranea MMB-1]
gi|326546566|gb|ADZ91786.1| Oligoribonuclease [Marinomonas mediterranea MMB-1]
Length = 182
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E++ I+EIA I+TD L +GP+LV+HQ K +D+M EWC HH
Sbjct: 8 LVWIDLEMTGLDPEMNTIIEIATIVTDKHLNVLAQGPNLVVHQDKGVMDAMDEWCTTHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++VL S +T +AE++ + F++K + + GNSV D FL KYMP L + F
Sbjct: 68 QSGLTQRVLDSAITMEQAEQETIAFLEKYLPAGKSPICGNSVGQDRRFLYKYMPRLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P +K H ALDDI ESI ELK+Y++ +F
Sbjct: 128 HYRYIDVSTLKELGRRWKPEALDGF-TKTGAHLALDDILESIGELKHYRKTLF 179
>gi|296118714|ref|ZP_06837290.1| oligoribonuclease [Corynebacterium ammoniagenes DSM 20306]
gi|295968203|gb|EFG81452.1| oligoribonuclease [Corynebacterium ammoniagenes DSM 20306]
Length = 222
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 123/199 (61%), Gaps = 4/199 (2%)
Query: 49 SNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPD 108
+ + + + +S TP + + LVWIDLEMTGL + I+EIA IITD +L EG D
Sbjct: 4 AGVKMADMTSSATPAKHDR---LVWIDLEMTGLDPKRHTIVEIAAIITDAELNVIGEGLD 60
Query: 109 LVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-L 167
+VIH T E L M ++ N H +SGLT+++ + T +EAE V+E ++K+ P L
Sbjct: 61 IVIHATDEELSRMDDFVTNMHNSSGLTEEIKAATTTLKEAETAVLELIEKHCDPEHPAPL 120
Query: 168 AGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDD 227
AGNS+ D F+++YMP L + ++DVS+IK L RW+PR Y P K HRAL D
Sbjct: 121 AGNSIATDRTFIREYMPRLDKALHYRMIDVSTIKELARRWHPRAYFNQPDKGLAHRALAD 180
Query: 228 IRESIMELKYYKENIFKTN 246
I ESI EL YY+ ++F+T+
Sbjct: 181 IVESIRELDYYRRSVFRTD 199
>gi|91228387|ref|ZP_01262313.1| oligoribonuclease [Vibrio alginolyticus 12G01]
gi|91188028|gb|EAS74334.1| oligoribonuclease [Vibrio alginolyticus 12G01]
Length = 181
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAIHQPEEELVKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVERVRNSQISEQDAVAQTIEFLEKWVPKGASPICGNSIGQDRRFLYKHMPELEEFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS++K L RW P +K+ H ALDDIRESI ELKYY+ IFK
Sbjct: 128 HYRYVDVSTLKELARRWQPEVLNGF-TKQGTHLALDDIRESIAELKYYRGTIFK 180
>gi|28899597|ref|NP_799202.1| oligoribonuclease [Vibrio parahaemolyticus RIMD 2210633]
gi|153840401|ref|ZP_01993068.1| oligoribonuclease [Vibrio parahaemolyticus AQ3810]
gi|260876662|ref|ZP_05889017.1| oligoribonuclease [Vibrio parahaemolyticus AN-5034]
gi|260902310|ref|ZP_05910705.1| oligoribonuclease [Vibrio parahaemolyticus AQ4037]
gi|31076785|sp|Q87L01.1|ORN_VIBPA RecName: Full=Oligoribonuclease
gi|28807833|dbj|BAC61086.1| oligoribonuclease [Vibrio parahaemolyticus RIMD 2210633]
gi|149745937|gb|EDM57067.1| oligoribonuclease [Vibrio parahaemolyticus AQ3810]
gi|308093946|gb|EFO43641.1| oligoribonuclease [Vibrio parahaemolyticus AN-5034]
gi|308110954|gb|EFO48494.1| oligoribonuclease [Vibrio parahaemolyticus AQ4037]
Length = 181
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVERVRNSKISEQDAVAQTIEFLEKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|406938519|gb|EKD71734.1| hypothetical protein ACD_46C00112G0005 [uncultured bacterium]
Length = 186
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 111/179 (62%), Gaps = 1/179 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP IHQ+ E L+ M +W H
Sbjct: 8 LIWIDLEMTGLNPEKDRIIEIATIVTDSHLNVVAEGPVFAIHQSNELLNGMDDWNTKQHN 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + E +AE + + F+++ V + GNSV+ D FL ++MP L F
Sbjct: 68 RSGLVARVQESHVNESQAEAETLAFLRQYVVEGKSPMCGNSVWQDRRFLARFMPALEKFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 249
+ L+DVS++K L +RW P Y + KE +H ALDDIR+SI ELKYY++++ + K
Sbjct: 128 HYRLIDVSTLKELALRWAPEIYNGL-QKESRHLALDDIRDSITELKYYRDHLLNHAVMK 185
>gi|417320812|ref|ZP_12107353.1| oligoribonuclease [Vibrio parahaemolyticus 10329]
gi|433658922|ref|YP_007276301.1| 3'-to-5' oligoribonuclease (orn) [Vibrio parahaemolyticus BB22OP]
gi|328472277|gb|EGF43147.1| oligoribonuclease [Vibrio parahaemolyticus 10329]
gi|432509610|gb|AGB11127.1| 3'-to-5' oligoribonuclease (orn) [Vibrio parahaemolyticus BB22OP]
Length = 181
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVERVRNSKISEQDAVTQTIEFLEKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|308500728|ref|XP_003112549.1| hypothetical protein CRE_30972 [Caenorhabditis remanei]
gi|308267117|gb|EFP11070.1| hypothetical protein CRE_30972 [Caenorhabditis remanei]
Length = 193
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++WID EMTGL +E + EIA I+TD +L GPD+VIHQ KE LD+M +W +
Sbjct: 15 IIWIDCEMTGLNVEKQTLCEIAVIVTDSELNTIATGPDIVIHQPKEVLDNMEDWPRKTFL 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL K++ S + EAE +VVEF+K + +AGNS+Y+D +F+KKYMP L
Sbjct: 75 ENGLMDKIISSKYSMTEAENEVVEFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLDEFA 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RWYP D++ P K HRA DDI ESI ELK Y+E+IF
Sbjct: 135 HYRCIDVSTIKGLVQRWYP-DFKH-PRKACTHRAFDDIMESIAELKNYRESIF 185
>gi|386265653|ref|YP_005829145.1| oligoribonuclease [Haemophilus influenzae R2846]
gi|309972889|gb|ADO96090.1| Oligoribonuclease [Haemophilus influenzae R2846]
Length = 182
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ E +RI+EIA I+TD L EGP L +HQ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLEPEKERIIEIATIVTDKNLNILAEGPVLAVHQPDELLNKMNDWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL + V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIECVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+ + K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYRGHFIKLD 182
>gi|407694606|ref|YP_006819394.1| oligoribonuclease [Alcanivorax dieselolei B5]
gi|407251944|gb|AFT69051.1| Oligoribonuclease [Alcanivorax dieselolei B5]
Length = 180
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP L +HQ+ + L +M EW HH
Sbjct: 7 LIWIDLEMTGLSPEQDRIIEIATIVTDANLQVLAEGPVLAVHQSDQRLAAMDEWNTRHHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S + E EAE+Q + F+ + V + GNS+ D FL +YMP L + F
Sbjct: 67 NSGLTDRVRASRVDEAEAERQTLLFLAQYVDEKMSPMCGNSICQDRRFLARYMPTLEAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ V KE KH ALDDIRESI EL YY+E+ +
Sbjct: 127 HYRNLDVSTLKELAARWKPQILSGV-KKENKHLALDDIRESIAELAYYREHFIR 179
>gi|443694287|gb|ELT95470.1| hypothetical protein CAPTEDRAFT_101539 [Capitella teleta]
Length = 179
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRILEIA I+TDG+L EGP + +HQ+ + LD M EWC N H
Sbjct: 7 LIWIDLEMTGLDPVNDRILEIATIVTDGQLNILEEGPVIAVHQSDDVLDIMNEWCVNTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GLT +V S ++E +AE+ ++F++K++ + GNS+ D FL +YMP+L F
Sbjct: 67 ATGLTDRVRASTISESQAEQITLDFLRKHIDQGISPMCGNSIGQDRRFLWRYMPELNDYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + SK+ H AL+DIRESI EL++Y++N K
Sbjct: 127 HYRNIDVSTLKELARRWKPELLTQF-SKKGTHLALEDIRESIDELRFYRQNFIK 179
>gi|341899574|gb|EGT55509.1| hypothetical protein CAEBREN_16681 [Caenorhabditis brenneri]
Length = 191
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++WID EMTGL +E + EIA I+TD +L GPD+VIHQ KE LD M EW +
Sbjct: 15 IIWIDCEMTGLNVEKQTLCEIAVIVTDSELNTIATGPDIVIHQPKEVLDEMEEWPRKTFL 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL +K++ S + EAE +V+EF+K + +AGNS+Y+D +F+KKYMP L
Sbjct: 75 ENGLMEKIVSSKYSMTEAENEVIEFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLDEFA 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RWYP D++ P K HRA DDI ESI ELK Y+E IF
Sbjct: 135 HYRCIDVSTIKGLVQRWYP-DFKH-PRKACTHRAFDDIMESIAELKNYREGIF 185
>gi|374724072|gb|EHR76152.1| oligoribonuclease [uncultured marine group II euryarchaeote]
Length = 180
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL I + I+EIA ++TDG+L +GP+L +H E L++M EW +HH
Sbjct: 8 LVWIDLEMTGLDITKESIIEIATVVTDGELNILAQGPNLAVHVADELLENMDEWNTSHHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V H ++ +EAE Q +EF+KK V L GNSV+ D F++K MPDL
Sbjct: 68 ASGLVDRVKHESVSVQEAEAQTLEFLKKWVPEGKAPLCGNSVWNDKKFMEKEMPDLVDYL 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K L RWYP R K+ H ALDDI ESI ELK+++ +F+
Sbjct: 128 HYRMIDVSTVKELARRWYPHVERY--EKKGAHLALDDILESIEELKHFRTRVFQ 179
>gi|444432204|ref|ZP_21227363.1| oligoribonuclease [Gordonia soli NBRC 108243]
gi|443887033|dbj|GAC69084.1| oligoribonuclease [Gordonia soli NBRC 108243]
Length = 199
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TD +L +G D+VIH + E L SM + H
Sbjct: 5 LVWIDCEMTGLRLESDKLIEIAALVTDSELNILGDGVDIVIHASDEDLASMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
ASGLT++V S +T EAEK V+++++ V T + LAGNS+ D F+ + MP+L +
Sbjct: 65 ASGLTEEVRASTVTVAEAEKAVLDYIRTQVKTAGAVPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYP+ Y P+K HRAL DIRESI ELKYY+ F
Sbjct: 125 LHYRMVDVSSIKELTRRWYPKIYYGQPAKGLAHRALADIRESIRELKYYRSAAF 178
>gi|149924278|ref|ZP_01912650.1| oligoribonuclease [Plesiocystis pacifica SIR-1]
gi|149814858|gb|EDM74424.1| oligoribonuclease [Plesiocystis pacifica SIR-1]
Length = 179
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL E + ILE+A ++T+ +L EGPDLV+H LD M WC HH
Sbjct: 8 LIWLDMEMTGLDPEREVILEVATLVTNAELEIIAEGPDLVVHHGDAVLDGMDAWCTEHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT+ V S ++ EAE Q ++F++++ L GNS+ D F+ +YMP L
Sbjct: 68 ASGLTQAVRESSISLAEAEAQTLDFLRQHCEPGKSPLCGNSIGQDRRFIVRYMPALDGFL 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVSSIK L RWYP +P K + HRALDDIRESI EL++Y+ ++F+
Sbjct: 128 HYRSVDVSSIKELARRWYP----DLPGFEKSEAHRALDDIRESIGELRHYRRHVFR 179
>gi|66822265|ref|XP_644487.1| RNA exonuclease 2 [Dictyostelium discoideum AX4]
gi|66822817|ref|XP_644763.1| RNA exonuclease 2 [Dictyostelium discoideum AX4]
gi|122057700|sp|Q556Y2.1|ORN_DICDI RecName: Full=Probable oligoribonuclease; AltName: Full=RNA
exonuclease 2 homolog
gi|60472610|gb|EAL70561.1| RNA exonuclease 2 [Dictyostelium discoideum AX4]
gi|60472946|gb|EAL70895.1| RNA exonuclease 2 [Dictyostelium discoideum AX4]
Length = 190
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P+ E +VW+DLEMTGL I D ILE+A +ITD +L +GP+LVIH++ E L +M
Sbjct: 10 PVINERSKRMVWVDLEMTGLDISKDVILEMAIVITDAELNVIEKGPNLVIHRSDEVLKNM 69
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
+WC HH SGLT+ V +S ++ EAEK ++EFV+K+ LAGN+V+ D FL K
Sbjct: 70 NDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGNTVHEDRRFLLK 129
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
MP A + ++DVS+IK L RWYP Y P K HRAL DI ESI ELK Y+
Sbjct: 130 EMPTFAEHLHYRIIDVSTIKELSRRWYP--YIPSPKKVCGHRALQDIEESIEELKSYRVT 187
Query: 242 IFK 244
+FK
Sbjct: 188 VFK 190
>gi|152978666|ref|YP_001344295.1| oligoribonuclease [Actinobacillus succinogenes 130Z]
gi|171704275|sp|A6VN13.1|ORN_ACTSZ RecName: Full=Oligoribonuclease
gi|150840389|gb|ABR74360.1| Exonuclease RNase T and DNA polymerase III [Actinobacillus
succinogenes 130Z]
Length = 182
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ + LD M +WC H
Sbjct: 8 LIWIDLEMTGLDPEQERIIEIATIVTDKNLNILAEGPVLAVHQPNQLLDKMSDWCIKTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GL ++V S LTER AE Q ++F+K V + GNSV D FL KYMPDLA F
Sbjct: 68 ANGLVERVKASKLTERAAELQTIDFLKLWVPKGASPICGNSVAQDKRFLFKYMPDLADYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P + K H ALDDIRESI EL YY+E+ K +
Sbjct: 128 HYRHLDVSTLKELARRWKP-EISDGFQKANTHLALDDIRESIKELAYYREHFIKLD 182
>gi|256832144|ref|YP_003160871.1| Exonuclease RNase T and DNA polymerase III [Jonesia denitrificans
DSM 20603]
gi|256685675|gb|ACV08568.1| Exonuclease RNase T and DNA polymerase III [Jonesia denitrificans
DSM 20603]
Length = 222
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 113/177 (63%), Gaps = 4/177 (2%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
P+VWID EMTGL I D ++EIA I+TD +L EG DLVI E L +MG++ + H
Sbjct: 9 PIVWIDCEMTGLDITQDALIEIAAIVTDSELNPLDEGIDLVIKPPTEALTTMGDFVRTMH 68
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKN--VGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
SGL + L GLT +AE++V+ +VKK+ V PL AGNSV D +FL + MP L
Sbjct: 69 TRSGLLNE-LDDGLTLEDAEQRVLRYVKKHSPVARKAPL-AGNSVGTDRLFLNRDMPALT 126
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ + ++DVSS+K L RWYPR Y P K HRAL DI ESI EL+YY++ +FK
Sbjct: 127 AHLHYRIIDVSSMKELARRWYPRTYYAAPGKNGGHRALADILESIDELRYYRKAMFK 183
>gi|424034280|ref|ZP_17773686.1| oligoribonuclease [Vibrio cholerae HENC-01]
gi|424039377|ref|ZP_17777759.1| oligoribonuclease [Vibrio cholerae HENC-02]
gi|408873104|gb|EKM12308.1| oligoribonuclease [Vibrio cholerae HENC-01]
gi|408893055|gb|EKM30370.1| oligoribonuclease [Vibrio cholerae HENC-02]
Length = 181
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVDRVRNSDVSEQDAVAQTIEFLEKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|121997034|ref|YP_001001821.1| oligoribonuclease [Halorhodospira halophila SL1]
gi|166216263|sp|A1WTK7.1|ORN_HALHL RecName: Full=Oligoribonuclease
gi|121588439|gb|ABM61019.1| Exonuclease, RNase T and DNA polymerase III [Halorhodospira
halophila SL1]
Length = 183
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP L IHQ + LDSM EW H
Sbjct: 8 LIWIDLEMTGLDPSRDRIIEIAVVVTDSNLDTLAEGPVLAIHQDRSLLDSMDEWNTRQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +TE EAE QV+ F+K+ V T + GNS+ D FL ++MPDL + F
Sbjct: 68 RSGLTERVRASTVTEAEAEAQVLAFLKQYVPARTSPMCGNSICQDRRFLARWMPDLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P V K H ALDDIR+SI EL++Y+ +
Sbjct: 128 HYRHIDVSTLKELARRWSPEVAEGV-RKSGNHLALDDIRDSIHELRHYRREFLR 180
>gi|119474830|ref|ZP_01615183.1| oligoribonuclease [marine gamma proteobacterium HTCC2143]
gi|119451033|gb|EAW32266.1| oligoribonuclease [marine gamma proteobacterium HTCC2143]
Length = 195
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 115/179 (64%), Gaps = 1/179 (0%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
+ L+WIDLEMTGL+ D I+EIA I+TD L EGP L IHQ++E L M EW H
Sbjct: 14 LNLIWIDLEMTGLEPATDHIIEIATIVTDSDLNTIAEGPVLAIHQSQEILSGMDEWNTTH 73
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
H +SGLT +V S + +R+AE+ +EF+++ V T + GNS+ D FL KYMP+L +
Sbjct: 74 HGSSGLTDRVKQSLIVDRDAEQLTLEFLRQYVPEGTSPICGNSIGQDRRFLVKYMPELEA 133
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
F + +DVS++K L RW P D +K+ H ALDDIRESI ELKYY++ K ++
Sbjct: 134 YFHYRNLDVSTLKELMRRWRP-DLISGFNKKGAHLALDDIRESIEELKYYRDVFIKGDM 191
>gi|390597334|gb|EIN06734.1| ribonuclease H-like protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 236
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 6/191 (3%)
Query: 58 NSQTPLEFEYKM-PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
S P ++K P+VWID EMTGL + D+I+EIA IIT+G L +G + V++ KE
Sbjct: 3 TSWVPRPMDFKAGPMVWIDCEMTGLDPKKDKIMEIAVIITNGDLQLVDDGVEYVVYVEKE 62
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVD 175
LD M EWC N H SGLT L S + + +QV+E++KK V T +LAGNSV+ D
Sbjct: 63 SLDGMDEWCTNQHGKSGLTHACLASPHSRQWVAQQVLEYIKKWVPERRTAVLAGNSVHAD 122
Query: 176 FMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPR---DYRKVPSKEQKHRALDDIRESI 232
FL + MP++ + +VDVSSIK + RWYP+ YR + + +HRALDDI+ SI
Sbjct: 123 RAFLVEEMPEVVDWLHYRIVDVSSIKEVVRRWYPKAGLTYRYA-AADSRHRALDDIKGSI 181
Query: 233 MELKYYKENIF 243
EL++Y+EN+F
Sbjct: 182 RELQWYRENVF 192
>gi|255319398|ref|ZP_05360614.1| oligoribonuclease [Acinetobacter radioresistens SK82]
gi|262380862|ref|ZP_06074013.1| oligoribonuclease [Acinetobacter radioresistens SH164]
gi|421466191|ref|ZP_15914875.1| oligoribonuclease [Acinetobacter radioresistens WC-A-157]
gi|421857217|ref|ZP_16289570.1| oligoribonuclease [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|255303534|gb|EET82735.1| oligoribonuclease [Acinetobacter radioresistens SK82]
gi|262297497|gb|EEY85415.1| oligoribonuclease [Acinetobacter radioresistens SH164]
gi|400203463|gb|EJO34451.1| oligoribonuclease [Acinetobacter radioresistens WC-A-157]
gi|403187348|dbj|GAB75771.1| oligoribonuclease [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 187
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 111/176 (63%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L IHQ+ + L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDHLNILAEGPVLAIHQSDQVLNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT EAE+Q ++F+KK V T + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIQRVRRSTLTALEAEQQTIDFLKKWVNPKTSPMCGNSICQDRRFLHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K+ H A+DDIR+SI ELKYY+E F T+
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKQASHLAMDDIRDSIRELKYYREYFFITH 183
>gi|406946618|gb|EKD77762.1| hypothetical protein ACD_42C00190G0002 [uncultured bacterium]
Length = 181
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E DRI+EIA I TD +L E IHQ ++ L+ M +WC H
Sbjct: 9 LIWVDLEMTGLNPEYDRIIEIAAIATDSELNVLAESAVFAIHQEQQYLNQMDKWCTEQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +TE EAE +++EF+KK L GN+VY D FL KYMP L + F
Sbjct: 69 KSGLTQRVQQSTITESEAETKILEFIKKYAPEKASPLCGNTVYQDRRFLVKYMPTLENYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ L+DVS++K L RW P+ KE H AL DIR+SI EL+YY++ K
Sbjct: 129 HYRLLDVSTVKILAQRWMPKIMDGF-KKESTHLALQDIRDSIEELRYYRKYFIK 181
>gi|195112234|ref|XP_002000679.1| GI22396 [Drosophila mojavensis]
gi|193917273|gb|EDW16140.1| GI22396 [Drosophila mojavensis]
Length = 187
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 110/174 (63%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL ++ D ILE++CIITD L EGP I + ++M EWC HH
Sbjct: 14 IVWMDLEMTGLNLDKDVILEVSCIITDKLLNIKSEGPCFTIKHPENVYENMNEWCIKHHN 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S +T +AE ++ ++K N+ LAGNSVYVD F++KY P +
Sbjct: 74 ESGLVDRCRSSEVTPDQAENLILTYLKANIPERKCPLAGNSVYVDRFFIQKYFPLVNEYL 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS+IK L RW P+ + P K+ HR+ +DI+ESI ELKYYKE++FK
Sbjct: 134 HYRIIDVSTIKELATRWNPQIIARAPRKQLAHRSDEDIKESIQELKYYKEHLFK 187
>gi|340502212|gb|EGR28923.1| mitochondrial precursor, putative [Ichthyophthirius multifiliis]
Length = 186
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 71 LVWIDLEMTGLKIEV--DRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
+WIDLEMTGL + V D+I+E+A ++TD L ++GP++VI+ LD+M EW H
Sbjct: 8 FLWIDLEMTGLDLHVRNDQIIELAVVLTDSHLENIIKGPEIVINAPNTLLDTMDEWNSKH 67
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVK-KNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H+ SGL ++ L+S ++ ++AE+QV++F+K NV + GNSV+ D+ FL K MP L
Sbjct: 68 HKESGLYEQSLNSKISLQQAEEQVLQFLKSNNVVQRQAYITGNSVHQDYRFLDKQMPKLI 127
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS+IK L +W P P K+ +HRALDDI ESI ELKYYK + FK
Sbjct: 128 EFLHYRIIDVSTIKTLAQKWNPGLLADAPVKKNQHRALDDILESIEELKYYKSSFFK 184
>gi|387770124|ref|ZP_10126310.1| oligoribonuclease [Pasteurella bettyae CCUG 2042]
gi|386904941|gb|EIJ69723.1| oligoribonuclease [Pasteurella bettyae CCUG 2042]
Length = 180
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ+ E L+ M +WC H
Sbjct: 8 LIWIDLEMTGLDPEQERIIEIATIVTDKDLNILAEGPVLAIHQSDELLNKMSDWCIKTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL ++V S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA F
Sbjct: 68 ENGLVERVKASKLTERAAELQTLDFLKKWVSKGVSPICGNSVAQDKRFLFKYMPELADYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H ALDDIRESI EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWQPEVLNGF-EKKATHLALDDIRESIAELVYYREHFIK 180
>gi|145296472|ref|YP_001139293.1| oligoribonuclease [Corynebacterium glutamicum R]
gi|417971015|ref|ZP_12611943.1| oligoribonuclease [Corynebacterium glutamicum S9114]
gi|418244870|ref|ZP_12871283.1| oligoribonuclease [Corynebacterium glutamicum ATCC 14067]
gi|166216072|sp|A4QGM5.1|ORN_CORGB RecName: Full=Oligoribonuclease
gi|140846392|dbj|BAF55391.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044494|gb|EGV40170.1| oligoribonuclease [Corynebacterium glutamicum S9114]
gi|354511062|gb|EHE83978.1| oligoribonuclease [Corynebacterium glutamicum ATCC 14067]
Length = 219
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Query: 57 QNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
+N+ TP LVW+DLEMTGL ++ I+E+A ++TD L EG DLV+H T+E
Sbjct: 5 ENNTTPAVAARDDRLVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVHATEE 64
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVD 175
L M ++ N HE+SGLT+++ S +T +EAE V+ ++K+ P LAGNS+ D
Sbjct: 65 ELAQMDDFVTNMHESSGLTEQIRESAVTLKEAEDAVLALIEKHCDPAHPAPLAGNSIATD 124
Query: 176 FMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMEL 235
F+++ MP L + +VDVSS+K L RWYPR Y K P K HRAL DI ESI EL
Sbjct: 125 RAFIREQMPRLDEALHYRMVDVSSVKELARRWYPRVYYKQPEKGLAHRALADIVESIREL 184
Query: 236 KYYKENIF 243
YY+ + F
Sbjct: 185 DYYRRSFF 192
>gi|343519485|ref|ZP_08756465.1| oligoribonuclease [Haemophilus pittmaniae HK 85]
gi|343392555|gb|EGV05120.1| oligoribonuclease [Haemophilus pittmaniae HK 85]
Length = 182
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ L+ M +WC H
Sbjct: 8 LIWIDLEMTGLDPESERIIEIATIVTDKDLNILAEGPVLAVHQDDALLNKMSDWCVKTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GL ++V S LTER AE Q ++F+K+ V + GNSV D FL KYMP+LA F
Sbjct: 68 ANGLIERVKQSRLTERAAELQTLDFLKRYVDKGCSPICGNSVAQDKRFLFKYMPELADYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P SK+ H ALDDIRESI EL YY+E+ N
Sbjct: 128 HYRHLDVSTLKELARRWKPEILDGF-SKQNTHLALDDIRESIKELAYYREHFLNLN 182
>gi|87121900|ref|ZP_01077785.1| oligoribonuclease [Marinomonas sp. MED121]
gi|86162698|gb|EAQ63978.1| oligoribonuclease [Marinomonas sp. MED121]
Length = 183
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 111/176 (63%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E + I+EIA I+TD L EGP+L IHQ +D+M EWC +HH
Sbjct: 8 LIWIDLEMTGLDPEKNTIIEIATIVTDKHLNVLSEGPNLAIHQPLSVMDAMDEWCTSHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK+VL + ++ +AE + ++F++K V + GNSV D FL +YMP L + F
Sbjct: 68 QSGLTKRVLETQMSMSQAELETIQFLEKYVPKGVSPICGNSVGQDRRFLYRYMPALEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS+IK L RW P SK+ H A+DDI+ESI EL +Y+E F N
Sbjct: 128 HYRYIDVSTIKELAKRWQPEVLDGF-SKKGSHLAMDDIKESIAELAFYREQFFNFN 182
>gi|304311523|ref|YP_003811121.1| oligoribonuclease [gamma proteobacterium HdN1]
gi|301797256|emb|CBL45476.1| Oligoribonuclease [gamma proteobacterium HdN1]
Length = 184
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + DRI+EIA +IT+ L EGP +HQ E L+ M EWC
Sbjct: 5 KTNLIWIDLEMTGLDPDQDRIIEIATVITNKDLEILAEGPVFAVHQPDEILNGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT +V S + + +AE Q +EF+K+ V T + GNS+ D FL +YMP L
Sbjct: 65 QHGKSGLTARVRASTVNDAQAEAQTIEFLKEWVDPRTSPICGNSICQDRRFLYRYMPALE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L RW+P+ + + SK+ H ALDDIR+SI ELK+Y++ +F
Sbjct: 125 GYFHYRNLDVSTLKELAARWHPQALQGI-SKKGSHLALDDIRDSINELKHYRQQLF 179
>gi|380028714|ref|XP_003698035.1| PREDICTED: LOW QUALITY PROTEIN: oligoribonuclease,
mitochondrial-like [Apis florea]
Length = 185
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 115/177 (64%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID E+TGL+IE D ILEIAC+ITD L E ++VI+Q L+ M EWC N H
Sbjct: 9 IVWIDTELTGLQIETDTILEIACLITDEDLNIVSEEFNIVINQPDVVLEHMNEWCMNFHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++ S +T ++AE+ ++ F+KK + + T LAGN++Y+D FL KYMP +
Sbjct: 69 KSGLVQESKCSKITLKDAEQMLLNFLKKYIPSQTCPLAGNTIYMDRXFLLKYMPLVNDYL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ ++DVS++K L RW +P K HRAL DI+ESI ELKYYK NIF +++
Sbjct: 129 HYRIIDVSTVKELIRRWSSNKSECIPKKLLHHRALPDIKESIEELKYYKNNIFMSSI 185
>gi|56478391|ref|YP_159980.1| oligoribonuclease [Aromatoleum aromaticum EbN1]
gi|81821041|sp|Q5P0T5.1|ORN_AZOSE RecName: Full=Oligoribonuclease
gi|56314434|emb|CAI09079.1| oligoribonuclease [Aromatoleum aromaticum EbN1]
Length = 183
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL+ + DRI+EIA +ITD +L E P + +HQ LD+M EW +N H
Sbjct: 8 LIWLDMEMTGLQPDSDRIIEIAIVITDSQLNTVAEAPVIAVHQPDSVLDAMDEWNRNTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S + E +AE Q++ F++++V +T + GNS+ D F+ +YMP L + F
Sbjct: 68 KSGLTDRVKASLIGEADAEAQMLAFLQQHVPAHTSPMCGNSICQDRRFMARYMPHLEAWF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P Y+ V K+ KH AL DIRESI EL++Y++N +
Sbjct: 128 HYRNLDVSTLKELAKRWRPEVYKGV-EKKGKHEALADIRESIAELRHYRDNFLR 180
>gi|340384293|ref|XP_003390648.1| PREDICTED: oligoribonuclease-like [Amphimedon queenslandica]
Length = 191
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E + I+EIA ++TD L + VEGP++VI Q K LD+M EW H
Sbjct: 8 LVWIDLEMTGLDPERENIIEIATVVTDESLAEVVEGPEIVIRQPKALLDTMDEWNTRQHR 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +VL S +AE++ + F+++ V + GNS+ +D FL +YMP L + F
Sbjct: 68 RSGLVDRVLASDCDSAQAEERTLAFLRRYVPPKASPMCGNSICLDRRFLVRYMPTLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +DVS++K LC RW P +R+V K+ +HRA+ DI +SI EL++Y+E ++
Sbjct: 128 HYRHLDVSTVKELCSRWAPSRFREV-VKKSRHRAMQDIHDSIAELRFYRERFMHIDV 183
>gi|268558090|ref|XP_002637035.1| Hypothetical protein CBG09528 [Caenorhabditis briggsae]
Length = 211
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++WID EMTGL +E + EIA I+TD +L GPD+VIHQ KE LD+M EW +
Sbjct: 35 IIWIDCEMTGLNVEKQTLCEIAVIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRKTFL 94
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL +K++ S + +AE +V+EF+K + +AGNS+Y+D +F+KKYMP L
Sbjct: 95 ENGLMEKIIDSKYSMNKAEDEVIEFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLDEFA 154
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RWYP D++ P K HRA DDI ESI ELK Y+E+IF
Sbjct: 155 HYRCIDVSTIKGLVQRWYP-DFKH-PRKACTHRAYDDIMESIAELKNYRESIF 205
>gi|359424206|ref|ZP_09215328.1| oligoribonuclease [Gordonia amarae NBRC 15530]
gi|358240480|dbj|GAB04910.1| oligoribonuclease [Gordonia amarae NBRC 15530]
Length = 198
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 111/173 (64%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TDG L +G D+VIH + E L M + H
Sbjct: 5 LVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHASDEDLAGMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT +V S +T EA++QV+ +++K T LAGNS+ D F+ + MP+L +
Sbjct: 65 ASGLTDEVRTSTVTIEEAQEQVLAYLRKYTTTGAVPLAGNSIATDRGFIARDMPELDAHL 124
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 125 HYRMVDVSSIKELCRRWYPRIYFGQPEKGLAHRALADILESIQELRYYRAAAF 177
>gi|261867655|ref|YP_003255577.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D11S-1]
gi|365967447|ref|YP_004949009.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans ANH9381]
gi|415767763|ref|ZP_11483393.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D17P-2]
gi|444345686|ref|ZP_21153693.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
gi|261412987|gb|ACX82358.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348658307|gb|EGY75878.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D17P-2]
gi|365746360|gb|AEW77265.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans ANH9381]
gi|443542549|gb|ELT52870.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
Length = 182
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 111/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L I Q L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIRQPDALLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LT+R AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTANGLIERVKASKLTKRAAELQTLDFLKKYVPKGASPICGNSVAQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P D +K+ H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWRP-DILNGFNKQNTHLALDDIRESIKELAYYREHFLKMD 182
>gi|111018425|ref|YP_701397.1| oligoribonuclease [Rhodococcus jostii RHA1]
gi|123340872|sp|Q0SGU7.1|ORN_RHOSR RecName: Full=Oligoribonuclease
gi|110817955|gb|ABG93239.1| oligoribonuclease [Rhodococcus jostii RHA1]
Length = 199
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++EIA ++TD +L EG D+VIH + L +M + HE
Sbjct: 5 LVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVTKMHE 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE+QV+ +++++V T LAGNS+ D F+ + MPDL +
Sbjct: 65 NSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPDLDTY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DIRESI ELKYY++ F
Sbjct: 125 LHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIRESIRELKYYRKTAF 178
>gi|345430555|ref|YP_004823676.1| oligoribonuclease [Haemophilus parainfluenzae T3T1]
gi|301156619|emb|CBW16090.1| oligoribonuclease [Haemophilus parainfluenzae T3T1]
Length = 182
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP + +HQ+ E L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVIAVHQSDELLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S +TER AE Q ++F+K+ V + GNS+ D FL KYMPDLA
Sbjct: 65 THTANGLVERVKASKITERAAELQTLDFLKRWVPKGASPICGNSIAQDKRFLYKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + VDVS++K L RW P K H ALDDIRESI EL YY+E+
Sbjct: 125 DYFHYRHVDVSTLKELASRWKPEILDGF-KKGNTHLALDDIRESIKELAYYREHFI 179
>gi|119715587|ref|YP_922552.1| oligoribonuclease [Nocardioides sp. JS614]
gi|119536248|gb|ABL80865.1| Exonuclease, RNase T and DNA polymerase III [Nocardioides sp.
JS614]
Length = 222
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 114/174 (65%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TD L G DL++ E LD M E+ ++ HE
Sbjct: 5 LVWIDCEMTGLDLRADALIEVAALVTDFDLNVLGSGVDLIVKPPAEALDQMNEFVRDMHE 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYT-PLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++ L SG++ EAE+QV+ +VK+ + P LAGN+V D FL + MP+L +
Sbjct: 65 KSGLLRE-LDSGISLDEAEEQVLAYVKEFCPDGSRPPLAGNTVATDRAFLARDMPNLETF 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y + P+K HRAL DI+ESI EL+YY++ +F
Sbjct: 124 LHYRIVDVSSIKELSRRWYPRAYFQAPAKRGNHRALADIQESIEELRYYRDAVF 177
>gi|407279511|ref|ZP_11107981.1| oligoribonuclease [Rhodococcus sp. P14]
Length = 199
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL+I+ D+++EIA ++TD L +G D+VIH E L +M + HE
Sbjct: 5 LVWIDCEMTGLRIDSDQLIEIAALVTDSDLNVLGDGVDIVIHADDEALAAMPDVVTEMHE 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S ++ EAEK V+++++ +V T LAGNS+ D F+ + MP+L +
Sbjct: 65 RSGLTEEVRRSTVSVAEAEKTVLDYIRAHVPEAGTAPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K LC RWYPR Y P+K HRAL DI+ESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSVKELCRRWYPRIYFGQPAKGLSHRALADIKESIRELRYYRRTAF 178
>gi|325577877|ref|ZP_08148110.1| oligoribonuclease [Haemophilus parainfluenzae ATCC 33392]
gi|325160307|gb|EGC72434.1| oligoribonuclease [Haemophilus parainfluenzae ATCC 33392]
Length = 200
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP + +HQ+ E L+ M EWC
Sbjct: 23 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVIAVHQSDELLNKMSEWCVK 82
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S +TER AE Q ++F+K+ V + GNS+ D FL KYMPDLA
Sbjct: 83 THTANGLVERVKASKITERAAELQTLDFLKRWVPKGASPICGNSIAQDKRFLYKYMPDLA 142
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + VDVS++K L RW P K H ALDDIRESI EL YY+E+
Sbjct: 143 DYFHYRHVDVSTLKELASRWKPEILEGF-KKGNTHLALDDIRESIKELAYYREHFI 197
>gi|399545802|ref|YP_006559110.1| oligoribonuclease [Marinobacter sp. BSs20148]
gi|399161134|gb|AFP31697.1| Oligoribonuclease [Marinobacter sp. BSs20148]
Length = 180
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E +RI+E+A +ITD +L EGP L +HQ+ + +M EWC H
Sbjct: 7 LVWIDLEMTGLDPEQERIIEMATLITDSELNLIAEGPVLAVHQSDTLMGAMDEWCTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++E EAE+Q + F+++++ + L GNS+ D FL KYMP L F
Sbjct: 67 ESGLTQRVKDSRISEAEAEQQTLAFLREHLESGDSPLCGNSIGQDRRFLVKYMPQLEEFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P D K+ H ALDDIR+SI EL++Y+E+ FK
Sbjct: 127 HYRNLDVSTIKELARRWRP-DVLNGVKKQGNHLALDDIRDSINELRHYREHFFK 179
>gi|322788644|gb|EFZ14245.1| hypothetical protein SINV_00413 [Solenopsis invicta]
Length = 189
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 112/169 (66%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWIDLEMTGL ++ D ILEIAC++TD L E ++VIHQ+ L++M +WC+ +H
Sbjct: 21 IVWIDLEMTGLDVDKDHILEIACLVTDKNLNVISEDLNIVIHQSDIILENMNDWCKENHT 80
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT+ S ++ EAEK V+ F+KK + LAG+SVY+D FL KYMP +
Sbjct: 81 KTGLTQNSRSSTVSLEEAEKMVLNFLKKYTLERSCPLAGSSVYMDRFFLHKYMPLVNEYL 140
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
+ ++DVS++K + RW P +P K+ HRALDDI+ESI EL+YYK
Sbjct: 141 HYRIIDVSTVKEIARRWNPGVLNSMPKKKLNHRALDDIKESINELRYYK 189
>gi|444429159|ref|ZP_21224400.1| oligoribonuclease [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444237624|gb|ELU49310.1| oligoribonuclease [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 181
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++V +S ++E++A Q +EF+ K V + GNS+ D FL K+MP+L F
Sbjct: 68 SSGLVERVRNSDVSEQDAVAQTIEFLDKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|359419542|ref|ZP_09211493.1| oligoribonuclease [Gordonia araii NBRC 100433]
gi|358244503|dbj|GAB09562.1| oligoribonuclease [Gordonia araii NBRC 100433]
Length = 199
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D+++EIA ++TDG L +G D+VIH E L +M + H
Sbjct: 5 LVWIDCEMTGLDTASDKLIEIAALVTDGDLNILGDGVDIVIHADDEALANMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
ASGLT++V S +T +AE+QV+ +++K+V + + LAGNS+ D FL + MP L
Sbjct: 65 ASGLTEEVRASTVTLADAEEQVLAYIRKHVTSPGQVPLAGNSIATDRAFLARDMPKLNDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYP+ Y P+K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPKIYFGQPAKGLSHRALSDIRESIQELRYYRAAAF 178
>gi|336372347|gb|EGO00686.1| hypothetical protein SERLA73DRAFT_133671 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385091|gb|EGO26238.1| hypothetical protein SERLADRAFT_384634 [Serpula lacrymans var.
lacrymans S7.9]
Length = 205
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 115/187 (61%), Gaps = 9/187 (4%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
PL+F P+VW+D EMTGL D+ILEIA +ITDG L EG LV+ K LD M
Sbjct: 6 PLDFNAG-PMVWVDCEMTGLDPRKDKILEIAVLITDGNLELVDEGIQLVVRTEKSILDGM 64
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLK 180
EWC N H SGLTK L S T+ + V+ ++KK + T +LAGNSV+ D FL
Sbjct: 65 DEWCINQHGRSGLTKACLTSPYTKDYVSQAVLAYIKKWIPQQRTGVLAGNSVHADRSFLV 124
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKE----QKHRALDDIRESIMELK 236
+ MP++ + ++DVSSIK LC RWYP + P +E HRALDDI+ SI EL+
Sbjct: 125 EEMPEVVDWLHYRIIDVSSIKELCRRWYP---TRSPPRETYSRNSHRALDDIQGSIRELQ 181
Query: 237 YYKENIF 243
+Y++NIF
Sbjct: 182 WYRKNIF 188
>gi|156972480|ref|YP_001443387.1| oligoribonuclease [Vibrio harveyi ATCC BAA-1116]
gi|166216591|sp|A7MZ48.1|ORN_VIBHB RecName: Full=Oligoribonuclease
gi|156524074|gb|ABU69160.1| hypothetical protein VIBHAR_00112 [Vibrio harveyi ATCC BAA-1116]
Length = 181
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELVKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 SSGLVERVRNSDVSEQDAVAQTIEFLEKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|333907808|ref|YP_004481394.1| oligoribonuclease [Marinomonas posidonica IVIA-Po-181]
gi|333477814|gb|AEF54475.1| Oligoribonuclease [Marinomonas posidonica IVIA-Po-181]
Length = 183
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ E D I+EIA ++TD L +GP+L IHQ K +D M EWC HH
Sbjct: 8 LIWIDLEMTGLEPEQDTIIEIATVVTDKDLNVLAKGPNLAIHQEKSVMDGMDEWCTQHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT KVL S + AE Q + F+++ V + GNSV D FL +YMP L + F
Sbjct: 68 ASGLTAKVLASDIDMAAAEAQTIAFLEQYVPAGVSPICGNSVGQDRRFLYRYMPKLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +DVS+IK L RW P +K H ALDDI ESI ELK+Y++ +F ++
Sbjct: 128 HYRYLDVSTIKELARRWKPEALEGF-TKSGAHLALDDILESIGELKHYRKTMFGLDV 183
>gi|418249212|ref|ZP_12875534.1| oligoribonuclease [Mycobacterium abscessus 47J26]
gi|353450867|gb|EHB99261.1| oligoribonuclease [Mycobacterium abscessus 47J26]
Length = 251
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 51 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 110
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T +EAE V+E+++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 111 KSGLTQEVRTSVVTLQEAEAMVLEYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 170
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 171 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 224
>gi|198438327|ref|XP_002132043.1| PREDICTED: similar to small fragment nuclease [Ciona intestinalis]
Length = 205
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL + D ILE+AC++TDG L + DLVIHQ+ E L++M EWC H
Sbjct: 34 MVWVDLEMTGLDVNKDHILEMACLVTDGNLNVIAQEEDLVIHQSDEVLNNMNEWCIEQHG 93
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S +T +AE +++F++K+ LAGN+++ D FL YMP
Sbjct: 94 RSGLTESVRKSMITLTQAEDIMLKFIQKHAPYKVCPLAGNTIHADKRFLDHYMPRFMDHL 153
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYP P K HRAL+DI ESI ELK+Y++ +F
Sbjct: 154 HYRIVDVSSIKELSKRWYPNVLP--PPKGSSHRALEDILESIAELKFYRKTLF 204
>gi|452947210|gb|EME52699.1| oligoribonuclease [Rhodococcus ruber BKS 20-38]
Length = 199
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL+I+ D+++EIA ++TD L +G D+VIH E L +M + HE
Sbjct: 5 LVWIDCEMTGLRIDSDQLIEIAALVTDSDLNVLGDGVDIVIHADDEALAAMPDVVTEMHE 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S ++ EAEK V+++++ +V T LAGNS+ D F+ + MP+L +
Sbjct: 65 RSGLTEEVRKSTVSVAEAEKMVLDYIRAHVPEAGTAPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K LC RWYPR Y P+K HRAL DI+ESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSVKELCRRWYPRIYFGQPAKGLSHRALADIKESIRELRYYRRTAF 178
>gi|386388853|ref|ZP_10073699.1| oligoribonuclease [Haemophilus paraphrohaemolyticus HK411]
gi|385696996|gb|EIG27456.1| oligoribonuclease [Haemophilus paraphrohaemolyticus HK411]
Length = 182
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 111/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L + Q+ E L M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAVKQSDELLGKMSDWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL K+V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THTENGLIKRVKASKLTERAAELQTIDFLKKWVPKGASPICGNSIAQDKRFLYKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P + K+ H ALDDI+ESI ELK+Y+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELVRRWKPEILEQF-KKQNTHLALDDIKESINELKFYREHFIKLD 182
>gi|420937592|ref|ZP_15400861.1| oligoribonuclease [Mycobacterium massiliense 1S-152-0914]
gi|420940932|ref|ZP_15404194.1| oligoribonuclease [Mycobacterium massiliense 1S-153-0915]
gi|420945601|ref|ZP_15408854.1| oligoribonuclease [Mycobacterium massiliense 1S-154-0310]
gi|420951193|ref|ZP_15414439.1| oligoribonuclease [Mycobacterium massiliense 2B-0626]
gi|420960920|ref|ZP_15424148.1| oligoribonuclease [Mycobacterium massiliense 2B-1231]
gi|421001602|ref|ZP_15464732.1| oligoribonuclease [Mycobacterium massiliense 2B-0912-S]
gi|392143107|gb|EIU68832.1| oligoribonuclease [Mycobacterium massiliense 1S-152-0914]
gi|392151719|gb|EIU77427.1| oligoribonuclease [Mycobacterium massiliense 1S-153-0915]
gi|392158809|gb|EIU84505.1| oligoribonuclease [Mycobacterium massiliense 1S-154-0310]
gi|392160970|gb|EIU86661.1| oligoribonuclease [Mycobacterium massiliense 2B-0626]
gi|392200420|gb|EIV26026.1| oligoribonuclease [Mycobacterium massiliense 2B-0912-S]
gi|392253985|gb|EIV79452.1| oligoribonuclease [Mycobacterium massiliense 2B-1231]
Length = 208
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 8 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T +EAE V+E+++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 68 KSGLTQEVRTSVVTLQEAEAMVLEYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 128 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 181
>gi|419711718|ref|ZP_14239181.1| oligoribonuclease [Mycobacterium abscessus M93]
gi|419717574|ref|ZP_14244953.1| oligoribonuclease [Mycobacterium abscessus M94]
gi|382937959|gb|EIC62303.1| oligoribonuclease [Mycobacterium abscessus M94]
gi|382939040|gb|EIC63369.1| oligoribonuclease [Mycobacterium abscessus M93]
Length = 251
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 51 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 110
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLTK+V S +T +EAE V+++++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 111 KSGLTKEVRTSVVTLQEAEAMVLDYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 170
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 171 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 224
>gi|52425567|ref|YP_088704.1| oligoribonuclease [Mannheimia succiniciproducens MBEL55E]
gi|59798011|sp|Q65SE1.1|ORN_MANSM RecName: Full=Oligoribonuclease
gi|52307619|gb|AAU38119.1| Orn protein [Mannheimia succiniciproducens MBEL55E]
Length = 186
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L M +WC H
Sbjct: 8 LIWIDLEMTGLDPENERIIEIATIVTDKDLNILAEGPVLAVHQSDELLAKMSDWCIKTHS 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GL +V S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA F
Sbjct: 68 ANGLVDRVKASKLTERAAELQTIDFLKKWVPKGASPICGNSVAQDKRFLFKYMPELADYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P K+ H ALDDIRESI EL YY+++ K +
Sbjct: 128 HYRHLDVSTLKELARRWKPELLNGF-EKKNTHLALDDIRESIAELAYYRDHFIKLD 182
>gi|169628623|ref|YP_001702272.1| oligoribonuclease [Mycobacterium abscessus ATCC 19977]
gi|420867888|ref|ZP_15331273.1| oligoribonuclease [Mycobacterium abscessus 4S-0726-RA]
gi|421038326|ref|ZP_15501337.1| oligoribonuclease [Mycobacterium abscessus 4S-0116-R]
gi|421042678|ref|ZP_15505683.1| oligoribonuclease [Mycobacterium abscessus 4S-0116-S]
gi|169240590|emb|CAM61618.1| Probable oligoribonuclease [Mycobacterium abscessus]
gi|392073291|gb|EIT99131.1| oligoribonuclease [Mycobacterium abscessus 4S-0726-RA]
gi|392226540|gb|EIV52054.1| oligoribonuclease [Mycobacterium abscessus 4S-0116-R]
gi|392241744|gb|EIV67232.1| oligoribonuclease [Mycobacterium abscessus 4S-0116-S]
Length = 208
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 8 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLTK+V S +T +EAE V+++++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 68 KSGLTKEVRTSVVTLQEAEAMVLDYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 128 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 181
>gi|392591363|gb|EIW80691.1| ribonuclease H-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 241
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 134/232 (57%), Gaps = 15/232 (6%)
Query: 26 ASSSSSSSSSCKSVESKSK---ANSSSNLTLENQQNSQ------TPLEFEYKM-PLVWID 75
AS S ++S ++ ++S A + N + ++ +Q TP +Y P+VWID
Sbjct: 9 ASCSRATSQPLLTITTRSSSRIARLTRNPYVPGRKITQMSVDTWTPKPLDYNAGPMVWID 68
Query: 76 LEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLT 135
EMTGL D+ILEIA IIT+G+L EG + K+ LD M EWC N H SGLT
Sbjct: 69 CEMTGLNPPKDKILEIAVIITNGQLQPVDEGIRYAVRTDKKVLDGMDEWCTNQHGKSGLT 128
Query: 136 KKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVL 194
+ L + T E EK V+ ++KK V T LLAGNSV+ D F+ MP + + +
Sbjct: 129 AECLTAPHTLSEVEKMVLAYIKKWVPQQRTALLAGNSVHADRSFMVHEMPKVIDWLHYRI 188
Query: 195 VDVSSIKALCMRWYPRDYRKVPSK--EQKHRALDDIRESIMELKYYKENIFK 244
VDVSS+K L RWYP + VP + HRALDDI+ SI+EL++Y++NIFK
Sbjct: 189 VDVSSVKELARRWYPDN--PVPKELFGGNHRALDDIQGSIIELQWYRDNIFK 238
>gi|331245678|ref|XP_003335475.1| hypothetical protein PGTG_17328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309314465|gb|EFP91056.1| hypothetical protein PGTG_17328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 200
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 114/177 (64%), Gaps = 4/177 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + VD+I+EIACIITD L + +G VIH + LD MG WCQN H
Sbjct: 15 LVWIDCEMTGLDVTVDQIIEIACIITDKDLKELDDGIQFVIHVDQSVLDRMGPWCQNQHG 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY--TPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL++ L S T E ++++ +++ ++ +LAGNSVY D MFL K +P ++
Sbjct: 75 KSGLSEACLQSPHTLTEVDQKIRRYLELHLPGLKGKAVLAGNSVYADKMFLDKDLPLVSE 134
Query: 189 LFSHVLVDVSSIKALCMRWYPR--DYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ LVDVSSIK L RW P+ + K S KHRALDDIR+SI EL++Y++N F
Sbjct: 135 YLHYRLVDVSSIKELARRWEPKLVELAKPASIPSKHRALDDIRDSISELRFYRKNFF 191
>gi|397679067|ref|YP_006520602.1| oligoribonuclease [Mycobacterium massiliense str. GO 06]
gi|420930679|ref|ZP_15393955.1| oligoribonuclease [Mycobacterium massiliense 1S-151-0930]
gi|420955364|ref|ZP_15418603.1| oligoribonuclease [Mycobacterium massiliense 2B-0107]
gi|420991331|ref|ZP_15454483.1| oligoribonuclease [Mycobacterium massiliense 2B-0307]
gi|420997168|ref|ZP_15460308.1| oligoribonuclease [Mycobacterium massiliense 2B-0912-R]
gi|392139697|gb|EIU65429.1| oligoribonuclease [Mycobacterium massiliense 1S-151-0930]
gi|392189412|gb|EIV15046.1| oligoribonuclease [Mycobacterium massiliense 2B-0912-R]
gi|392190342|gb|EIV15974.1| oligoribonuclease [Mycobacterium massiliense 2B-0307]
gi|392255892|gb|EIV81353.1| oligoribonuclease [Mycobacterium massiliense 2B-0107]
gi|395457332|gb|AFN62995.1| Oligoribonuclease [Mycobacterium massiliense str. GO 06]
Length = 246
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 46 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 105
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T +EAE V+E+++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 106 KSGLTQEVRTSVVTLQEAEAMVLEYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 165
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 166 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 219
>gi|126666943|ref|ZP_01737919.1| oligoribonuclease [Marinobacter sp. ELB17]
gi|126628659|gb|EAZ99280.1| oligoribonuclease [Marinobacter sp. ELB17]
Length = 180
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E +RI+E+A +ITD +L EGP L +HQ+ + +M EWC H
Sbjct: 7 LVWIDLEMTGLDPEQERIIEMATLITDSELNLIAEGPVLAVHQSDTLMGAMDEWCTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++E EAE+Q + F+++++ L GNS+ D FL KYMP L F
Sbjct: 67 ESGLTQRVTDSRISEAEAEQQTLAFLREHLEPGDSPLCGNSIGQDRRFLVKYMPQLEEFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P D K+ H ALDDIR+SI EL++Y+E+ FK
Sbjct: 127 HYRNLDVSTIKELARRWRP-DVLDGVKKQGNHLALDDIRDSINELRHYREHFFK 179
>gi|418419767|ref|ZP_12992950.1| oligoribonuclease [Mycobacterium abscessus subsp. bolletii BD]
gi|420863491|ref|ZP_15326884.1| oligoribonuclease [Mycobacterium abscessus 4S-0303]
gi|420872321|ref|ZP_15335701.1| oligoribonuclease [Mycobacterium abscessus 4S-0726-RB]
gi|420909106|ref|ZP_15372419.1| oligoribonuclease [Mycobacterium abscessus 6G-0125-R]
gi|420915489|ref|ZP_15378794.1| oligoribonuclease [Mycobacterium abscessus 6G-0125-S]
gi|420919878|ref|ZP_15383176.1| oligoribonuclease [Mycobacterium abscessus 6G-0728-S]
gi|420926376|ref|ZP_15389661.1| oligoribonuclease [Mycobacterium abscessus 6G-1108]
gi|420965914|ref|ZP_15429126.1| oligoribonuclease [Mycobacterium abscessus 3A-0810-R]
gi|420976721|ref|ZP_15439903.1| oligoribonuclease [Mycobacterium abscessus 6G-0212]
gi|420982102|ref|ZP_15445272.1| oligoribonuclease [Mycobacterium abscessus 6G-0728-R]
gi|420986506|ref|ZP_15449667.1| oligoribonuclease [Mycobacterium abscessus 4S-0206]
gi|421006798|ref|ZP_15469912.1| oligoribonuclease [Mycobacterium abscessus 3A-0119-R]
gi|421012074|ref|ZP_15475166.1| oligoribonuclease [Mycobacterium abscessus 3A-0122-R]
gi|421016951|ref|ZP_15480017.1| oligoribonuclease [Mycobacterium abscessus 3A-0122-S]
gi|421022507|ref|ZP_15485555.1| oligoribonuclease [Mycobacterium abscessus 3A-0731]
gi|421028175|ref|ZP_15491210.1| oligoribonuclease [Mycobacterium abscessus 3A-0930-R]
gi|421033267|ref|ZP_15496289.1| oligoribonuclease [Mycobacterium abscessus 3A-0930-S]
gi|364001397|gb|EHM22593.1| oligoribonuclease [Mycobacterium abscessus subsp. bolletii BD]
gi|392074011|gb|EIT99849.1| oligoribonuclease [Mycobacterium abscessus 4S-0303]
gi|392076510|gb|EIU02343.1| oligoribonuclease [Mycobacterium abscessus 4S-0726-RB]
gi|392121480|gb|EIU47245.1| oligoribonuclease [Mycobacterium abscessus 6G-0125-R]
gi|392123173|gb|EIU48935.1| oligoribonuclease [Mycobacterium abscessus 6G-0125-S]
gi|392133883|gb|EIU59625.1| oligoribonuclease [Mycobacterium abscessus 6G-0728-S]
gi|392138784|gb|EIU64517.1| oligoribonuclease [Mycobacterium abscessus 6G-1108]
gi|392170980|gb|EIU96657.1| oligoribonuclease [Mycobacterium abscessus 6G-0212]
gi|392174120|gb|EIU99786.1| oligoribonuclease [Mycobacterium abscessus 6G-0728-R]
gi|392187923|gb|EIV13562.1| oligoribonuclease [Mycobacterium abscessus 4S-0206]
gi|392201341|gb|EIV26942.1| oligoribonuclease [Mycobacterium abscessus 3A-0119-R]
gi|392208712|gb|EIV34285.1| oligoribonuclease [Mycobacterium abscessus 3A-0122-R]
gi|392214695|gb|EIV40245.1| oligoribonuclease [Mycobacterium abscessus 3A-0122-S]
gi|392215204|gb|EIV40752.1| oligoribonuclease [Mycobacterium abscessus 3A-0731]
gi|392229808|gb|EIV55318.1| oligoribonuclease [Mycobacterium abscessus 3A-0930-S]
gi|392230740|gb|EIV56249.1| oligoribonuclease [Mycobacterium abscessus 3A-0930-R]
gi|392257402|gb|EIV82855.1| oligoribonuclease [Mycobacterium abscessus 3A-0810-R]
Length = 246
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 46 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 105
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLTK+V S +T +EAE V+++++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 106 KSGLTKEVRTSVVTLQEAEAMVLDYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 165
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 166 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 219
>gi|404258785|ref|ZP_10962102.1| oligoribonuclease [Gordonia namibiensis NBRC 108229]
gi|403402565|dbj|GAC00512.1| oligoribonuclease [Gordonia namibiensis NBRC 108229]
Length = 199
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TDG L +G D+VIH E L SM + H
Sbjct: 5 LVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDEALASMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAEK V+++++K+V T + LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTEEVRASTVTLAEAEKMVLDYIRKHVTTPGAVPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RW+P+ Y P K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSIKELARRWFPKVYFGQPDKGLAHRALADIRESIRELRYYRAAAF 178
>gi|387771494|ref|ZP_10127655.1| oligoribonuclease [Haemophilus parahaemolyticus HK385]
gi|386908853|gb|EIJ73539.1| oligoribonuclease [Haemophilus parahaemolyticus HK385]
Length = 182
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L I Q+ E L M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAIKQSDELLGKMSDWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL K+V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THTENGLIKRVKASKLTERAAELQTIDFLKKWVPKGVSPICGNSIAQDKRFLYKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P + ++ K+ H ALDDI+ESI ELK+Y+E K +
Sbjct: 125 DYFHYRHLDVSTLKELARRWKP-EILELFKKQNTHLALDDIKESINELKFYREYFIKLD 182
>gi|375266887|ref|YP_005024330.1| oligoribonuclease [Vibrio sp. EJY3]
gi|369842207|gb|AEX23351.1| oligoribonuclease [Vibrio sp. EJY3]
Length = 181
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S +TE++A Q + F++ V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVERVRNSKVTEQDAVAQTIAFLEPWVPKGASPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|332290039|ref|YP_004420891.1| oligoribonuclease [Gallibacterium anatis UMN179]
gi|330432935|gb|AEC17994.1| oligoribonuclease [Gallibacterium anatis UMN179]
Length = 182
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL DRI+EIA I+TD L EGP L I Q + L M EWCQ
Sbjct: 5 KQNLIWIDLEMTGLDPNKDRIIEIATIVTDKNLNILAEGPVLAIKQDDKILAGMNEWCQK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LTER AE Q ++F+KK V + GNSV D F+ YMPDLA
Sbjct: 65 THSANGLIERVRQSKLTERAAELQTLDFLKKWVPKGVSPICGNSVAQDKRFIFNYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L RW P K+ H ALDDIRESI EL YY+++
Sbjct: 125 DYFHYRYLDVSTLKELAARWKPEILSGF-KKKNSHLALDDIRESIAELAYYRQHFI 179
>gi|343511368|ref|ZP_08748534.1| oligoribonuclease [Vibrio scophthalmi LMG 19158]
gi|343514030|ref|ZP_08751115.1| oligoribonuclease [Vibrio sp. N418]
gi|342798419|gb|EGU34038.1| oligoribonuclease [Vibrio scophthalmi LMG 19158]
gi|342800891|gb|EGU36394.1| oligoribonuclease [Vibrio sp. N418]
Length = 181
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ + LD M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPESELDKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +++ +S +TE+EA +Q +EF+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 NSGLVERIRNSSVTEQEAIRQTIEFLEQWVPKGKSPICGNSIGQDRRFLYKHMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK H ALDDIRESI EL+YY++ IF
Sbjct: 128 HYRYVDVSTLKELTRRWKPEVLDGF-SKSGSHLALDDIRESIAELQYYRKTIF 179
>gi|402581111|gb|EJW75060.1| Rexo2 protein [Wuchereria bancrofti]
Length = 184
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 113/173 (65%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D EMTGL + I+EIAC IT+ LT EG +LVI Q K+ L M +WC+
Sbjct: 10 IVWVDCEMTGLDVSSKTIVEIACAITEADLTVVEEGFNLVISQPKDVLKGMDDWCKTTFA 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
++GL +++L S +T +EAE +++++V+++ L GNSV D +FL+K+MP L
Sbjct: 70 SNGLLQEILSSKITMKEAENEILKYVRQHTDPGMCPLGGNSVGCDRIFLQKHMPTLEKHL 129
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSSIK L RWYP Y + P KE HRAL+DI ESI EL +YK+NIF
Sbjct: 130 HYRNIDVSSIKELVKRWYPDVYARKPQKENTHRALNDIYESIEELNWYKKNIF 182
>gi|343493054|ref|ZP_08731393.1| oligoribonuclease [Vibrio nigripulchritudo ATCC 27043]
gi|342826561|gb|EGU60983.1| oligoribonuclease [Vibrio nigripulchritudo ATCC 27043]
Length = 181
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+EIA I+TD +L EGP L IHQ +E L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPEEELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +TE++A Q +EF+K+ V + GNSV D FL ++MP+L + F
Sbjct: 68 GSGLVARVKESTVTEQQAIDQTIEFLKQWVPEGKSPICGNSVGQDRRFLYEFMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P + SK H ALDDIRESI ELK+Y++++F
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLSQF-SKTGSHLALDDIRESIAELKFYRQHVF 179
>gi|297625994|ref|YP_003687757.1| oligoribonuclease [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921759|emb|CBL56317.1| Oligoribonuclease [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 223
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+AC++TDG+L +G D+++ +K LD MGE+ H
Sbjct: 2 LVWIDCEMTGLDLANDELIEVACLVTDGELNVQGDGIDVLVQPSKHALDHMGEFVTEMHT 61
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++ + T REAE+QV+ ++KK V T LAGN++ D FL K MP+L +
Sbjct: 62 KSGLLAELKNVKTTMREAEEQVLAYIKKYVPTERKAPLAGNTIGTDRTFLAKDMPELEAW 121
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSSIK L RWYPR Y + P K HRAL DI+ESI ELKY++ I
Sbjct: 122 VHYRNVDVSSIKELAKRWYPRTYYQAPDKHGNHRALADIQESIEELKYFRAAIM 175
>gi|388599183|ref|ZP_10157579.1| oligoribonuclease [Vibrio campbellii DS40M4]
Length = 181
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++V +S ++E++A Q +EF+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 SSGLVERVRNSDVSEQDAVAQTIEFLEEWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>gi|223042138|ref|ZP_03612309.1| oligoribonuclease [Actinobacillus minor 202]
gi|240947963|ref|ZP_04752389.1| oligoribonuclease [Actinobacillus minor NM305]
gi|223017077|gb|EEF15518.1| oligoribonuclease [Actinobacillus minor 202]
gi|240297719|gb|EER48180.1| oligoribonuclease [Actinobacillus minor NM305]
Length = 181
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L I Q+ E L M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAIKQSDELLAKMSDWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V +S LTER AE Q ++F+K+ V + GNSV D FL KYMPDLA
Sbjct: 65 THTENGLIERVKNSKLTERAAELQTIDFLKRWVPKGASPICGNSVPQDKRFLYKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
F + +DVS++K L RW P + K H ALDDIRESI ELK+Y+E+ K
Sbjct: 125 DYFHYRHLDVSTLKELANRWKPEILTQF-KKRNTHLALDDIRESINELKFYREHFIK 180
>gi|343927571|ref|ZP_08767041.1| oligoribonuclease [Gordonia alkanivorans NBRC 16433]
gi|343762559|dbj|GAA13967.1| oligoribonuclease [Gordonia alkanivorans NBRC 16433]
Length = 199
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TDG L +G D+VIH L SM + H
Sbjct: 5 LVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDAALASMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAEK V+++++K+V + + LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTEEVRASTVTLAEAEKMVLDYIRKHVTSPGAVPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RW+P+ Y P K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSIKELCRRWFPKVYFGQPDKGLAHRALADIRESIRELRYYRAAAF 178
>gi|377560665|ref|ZP_09790158.1| oligoribonuclease [Gordonia otitidis NBRC 100426]
gi|377522167|dbj|GAB35323.1| oligoribonuclease [Gordonia otitidis NBRC 100426]
Length = 194
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 72 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEA 131
+WID EMTGL +E D+++EIA ++TD L +G D+VIH LDSM + H
Sbjct: 1 MWIDCEMTGLDLEKDKLIEIAALVTDSDLNILGDGVDVVIHADDADLDSMPDVVTKMHAD 60
Query: 132 SGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S LT EAE V+E+++K+V T + LAGNS+ D F+ + MP+L +
Sbjct: 61 SGLTEEVRQSTLTVPEAEAMVLEYIRKHVTTPGAVPLAGNSIATDRGFIARDMPELDAYL 120
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DIRESI EL+YY+ F
Sbjct: 121 HYRMVDVSSIKELCRRWYPRIYFNQPEKGLAHRALADIRESIRELRYYRAAAF 173
>gi|424858734|ref|ZP_18282766.1| oligoribonuclease [Rhodococcus opacus PD630]
gi|356662421|gb|EHI42720.1| oligoribonuclease [Rhodococcus opacus PD630]
Length = 205
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++EIA ++TD +L EG D+VIH + L +M + HE
Sbjct: 11 LVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVTKMHE 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE+QV+ +++++V T LAGNS+ D F+ + MPDL +
Sbjct: 71 NSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPDLDTY 130
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DI+ESI ELKYY++ F
Sbjct: 131 LHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIKESIRELKYYRKTAF 184
>gi|110835071|ref|YP_693930.1| oligoribonuclease [Alcanivorax borkumensis SK2]
gi|123050323|sp|Q0VME0.1|ORN_ALCBS RecName: Full=Oligoribonuclease
gi|110648182|emb|CAL17658.1| oligoribonuclease [Alcanivorax borkumensis SK2]
Length = 181
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L EGP L +HQ+ LD M EW HH
Sbjct: 8 LIWIDLEMTGLSPENDRIIEIATIVTDAELNVLAEGPVLAVHQSDALLDGMDEWNTTHHN 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + + AE Q + F+++ V + GNS+ D FL YMP L + F
Sbjct: 68 NSGLVARVKASTVNDAAAESQTIAFLEQYVEAGMSPMCGNSICQDRRFLANYMPKLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P D SKE KH ALDDIRESI EL YY+E+
Sbjct: 128 HYRNLDVSTLKELARRWKP-DILPGFSKENKHLALDDIRESIAELVYYREHFI 179
>gi|226360543|ref|YP_002778321.1| oligoribonuclease [Rhodococcus opacus B4]
gi|419966647|ref|ZP_14482566.1| oligoribonuclease [Rhodococcus opacus M213]
gi|226239028|dbj|BAH49376.1| oligoribonuclease [Rhodococcus opacus B4]
gi|414567931|gb|EKT78705.1| oligoribonuclease [Rhodococcus opacus M213]
Length = 199
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++EIA ++TD +L EG D+VIH + L +M + HE
Sbjct: 5 LVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVTKMHE 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE+QV+ +++++V T LAGNS+ D F+ + MPDL +
Sbjct: 65 NSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPDLDTY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DI+ESI ELKYY++ F
Sbjct: 125 LHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIKESIRELKYYRKTAF 178
>gi|392548784|ref|ZP_10295921.1| oligoribonuclease [Pseudoalteromonas rubra ATCC 29570]
Length = 181
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + DRILEIA +ITD L EGP + IHQ+ E LD+M EWC N H
Sbjct: 8 LIWLDLEMTGLEPKTDRILEIATVITDCDLNVLAEGPVIAIHQSDELLDNMDEWCTNQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S +E +A KQ ++F+K+ V + GNS+ D FL KYMP+L F
Sbjct: 68 RSGLTARCKASSHSESDAIKQTLDFLKQWVPPGKSPMCGNSIGQDRRFLNKYMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P + K+ H ALDDI++SIMELK Y++ F
Sbjct: 128 HYRNLDVSTIKELARRWKPELLNGI-HKKSSHLALDDIKDSIMELKVYQQKFF 179
>gi|33357113|pdb|1J9A|A Chain A, Oligoribonuclease
Length = 184
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLE TGL E +RI+EIA I+TD L EGP L +HQ+ E L+ +WCQ
Sbjct: 7 KQNLIWIDLEXTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKXNDWCQK 66
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL +++ S LTER AE Q ++F+KK V + GNS+ D FL KY PDLA
Sbjct: 67 THSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYXPDLA 126
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 127 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFXKLD 184
>gi|94311510|ref|YP_584720.1| oligoribonuclease [Cupriavidus metallidurans CH34]
gi|93355362|gb|ABF09451.1| oligoribonuclease [Cupriavidus metallidurans CH34]
Length = 205
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL+ + DRI+E+A ++TD +L EGP LVIHQ LD+M W + H
Sbjct: 15 LVWLDMEMTGLQPDTDRIIEVAVVVTDSELNILAEGPVLVIHQPDAVLDAMDNWNKGTHG 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +KV S LTE +AE +++ F+K+ V + GNS+ D F+ +YMP L S F
Sbjct: 75 RSGLIEKVKASTLTEAQAEAELLAFLKRWVPANKSPMCGNSICQDRRFMARYMPKLESFF 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K LC RW P ++ +K Q H AL DI ES+ EL+YY+++ KT+
Sbjct: 135 HYRNLDVSTLKELCKRWEPAIHKGF-TKRQLHTALADILESVEELRYYRQHFIKTS 189
>gi|441521569|ref|ZP_21003228.1| oligoribonuclease [Gordonia sihwensis NBRC 108236]
gi|441458792|dbj|GAC61189.1| oligoribonuclease [Gordonia sihwensis NBRC 108236]
Length = 199
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL I D+++EIA ++TD L EG DLVIH E L M E H
Sbjct: 5 LVWIDCEMTGLDIGSDKLIEIAALVTDSDLNIIGEGVDLVIHADDEALAGMPEVVAKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAEK V++++++++ T LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTEEVRASTVTLAEAEKAVLDYLREHITTAGAAPLAGNSIGTDRGFIARDMPELNAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYP Y P K HRAL DIRESI EL+YY+E F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPPIYFGQPQKGLAHRALADIRESIRELRYYRETAF 178
>gi|307188078|gb|EFN72910.1| Oligoribonuclease, mitochondrial [Camponotus floridanus]
Length = 171
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 113/169 (66%)
Query: 76 LEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLT 135
+EMTGL IE D ILEIACIITD L +++IHQ+ LD+M WC+ H+ +GLT
Sbjct: 1 MEMTGLDIEKDHILEIACIITDKTLKIISTELNIIIHQSNIILDNMNAWCKKQHKKTGLT 60
Query: 136 KKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLV 195
+ S ++ ++AE V+ F+++ + LAGN+VY+D FL KYMP + + + ++
Sbjct: 61 ENSRLSTVSLKDAENMVLNFLQEYIHPGVCPLAGNTVYMDRFFLYKYMPLVNNYLHYRII 120
Query: 196 DVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
DVS+IK + RW P Y+ +P KE KHRALDDI+ESI EL YY+++IF+
Sbjct: 121 DVSTIKEVVRRWNPNIYKSIPQKELKHRALDDIKESIKELAYYQKHIFE 169
>gi|384101083|ref|ZP_10002136.1| oligoribonuclease [Rhodococcus imtechensis RKJ300]
gi|432341631|ref|ZP_19590966.1| oligoribonuclease [Rhodococcus wratislaviensis IFP 2016]
gi|383841389|gb|EID80670.1| oligoribonuclease [Rhodococcus imtechensis RKJ300]
gi|430773304|gb|ELB88997.1| oligoribonuclease [Rhodococcus wratislaviensis IFP 2016]
Length = 199
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++EIA ++TD +L EG D+VIH + L +M + HE
Sbjct: 5 LVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVTKMHE 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE+QV+ +++++V T LAGNS+ D F+ + MPDL +
Sbjct: 65 NSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPDLDTY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DI+ESI ELKYY++ F
Sbjct: 125 LHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIKESIRELKYYRKTAF 178
>gi|53728767|ref|ZP_00135217.2| COG1949: Oligoribonuclease (3'->5' exoribonuclease) [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208604|ref|YP_001053829.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165976560|ref|YP_001652153.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|190150461|ref|YP_001968986.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303250117|ref|ZP_07336319.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|303253291|ref|ZP_07339440.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307246049|ref|ZP_07528131.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307248157|ref|ZP_07530185.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|307250390|ref|ZP_07532338.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307252772|ref|ZP_07534663.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307255031|ref|ZP_07536849.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307257187|ref|ZP_07538959.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|307259467|ref|ZP_07541192.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|307261616|ref|ZP_07543284.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|307263805|ref|ZP_07545411.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|166215747|sp|A3N1D8.1|ORN_ACTP2 RecName: Full=Oligoribonuclease
gi|126097396|gb|ABN74224.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165876661|gb|ABY69709.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|189915592|gb|ACE61844.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302647973|gb|EFL78180.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|302651180|gb|EFL81334.1| oligoribonuclease [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306852984|gb|EFM85207.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306855334|gb|EFM87509.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306857600|gb|EFM89708.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306859804|gb|EFM91826.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306861904|gb|EFM93880.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306864349|gb|EFM96260.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306866403|gb|EFM98266.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306868739|gb|EFN00548.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|306870926|gb|EFN02664.1| Oligoribonuclease [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 184
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 3/179 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+E+A I+TD L EGP L +HQ+ + L+ M +WC H
Sbjct: 9 LIWIDLEMTGLDPEKERIIEVATIVTDKDLNILAEGPVLTVHQSNDLLNKMSDWCIKTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL ++V S LTER E Q ++F+K+ V + GNSV D FL KYMPDLA F
Sbjct: 69 ENGLIERVKQSKLTERAVELQTIDFLKQWVPKGASPICGNSVAQDKRFLYKYMPDLADYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 249
+ +DVS++K L RW P D +K+ H ALDDIRESI ELK+Y+ + NL+K
Sbjct: 129 HYRHLDVSTLKELARRWKP-DMLNAFNKKNTHLALDDIRESIEELKFYRTHFI--NLEK 184
>gi|402304390|ref|ZP_10823460.1| oligoribonuclease [Haemophilus sputorum HK 2154]
gi|400377978|gb|EJP30843.1| oligoribonuclease [Haemophilus sputorum HK 2154]
Length = 182
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L + Q+ E L M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAVKQSDELLAKMSDWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+K+ V + GNSV D FL KYMPDLA
Sbjct: 65 THTENGLIERVKASKLTERAAELQTLDFLKRWVPKGASPICGNSVAQDKRFLFKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P + K K+ H ALDDIRESI ELK+Y+E+ + +
Sbjct: 125 DYFHYRYLDVSTLKELASRWKP-EMLKGFKKQNTHLALDDIRESINELKFYREHFIRLD 182
>gi|419802237|ref|ZP_14327433.1| oligoribonuclease [Haemophilus parainfluenzae HK262]
gi|419844943|ref|ZP_14368230.1| oligoribonuclease [Haemophilus parainfluenzae HK2019]
gi|385190999|gb|EIF38426.1| oligoribonuclease [Haemophilus parainfluenzae HK262]
gi|386416869|gb|EIJ31361.1| oligoribonuclease [Haemophilus parainfluenzae HK2019]
Length = 182
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP + +HQ+ E L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVIAVHQSDELLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL +V S LTER AE Q ++F+K+ V + GNS+ D FL KYMPDLA
Sbjct: 65 THTANGLVDRVKASKLTERAAELQTLDFLKRWVPKGASPICGNSIAQDKRFLYKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L RW P K H ALDDIRESI EL YY+++
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILDGF-KKGNTHLALDDIRESIKELAYYRDHFI 179
>gi|52842945|ref|YP_096744.1| oligoribonuclease [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|54295579|ref|YP_127994.1| oligoribonuclease [Legionella pneumophila str. Lens]
gi|54298733|ref|YP_125102.1| oligoribonuclease [Legionella pneumophila str. Paris]
gi|148358519|ref|YP_001249726.1| oligoribonuclease [Legionella pneumophila str. Corby]
gi|296108393|ref|YP_003620094.1| putative ACR [Legionella pneumophila 2300/99 Alcoy]
gi|378778633|ref|YP_005187072.1| oligoribonuclease [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|397665336|ref|YP_006506874.1| oligoribonuclease [Legionella pneumophila subsp. pneumophila]
gi|397668418|ref|YP_006509955.1| oligoribonuclease [Legionella pneumophila subsp. pneumophila]
gi|59797992|sp|Q5WT59.1|ORN_LEGPL RecName: Full=Oligoribonuclease
gi|59797993|sp|Q5X1E6.1|ORN_LEGPA RecName: Full=Oligoribonuclease
gi|59797999|sp|Q5ZRY0.1|ORN_LEGPH RecName: Full=Oligoribonuclease
gi|166216265|sp|A5IAI0.1|ORN_LEGPC RecName: Full=Oligoribonuclease
gi|52630056|gb|AAU28797.1| oligoribonuclease [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53752518|emb|CAH13950.1| hypothetical protein lpp2797 [Legionella pneumophila str. Paris]
gi|53755411|emb|CAH16907.1| hypothetical protein lpl2666 [Legionella pneumophila str. Lens]
gi|148280292|gb|ABQ54380.1| oligoribonuclease [Legionella pneumophila str. Corby]
gi|295650295|gb|ADG26142.1| putative ACR [Legionella pneumophila 2300/99 Alcoy]
gi|307611619|emb|CBX01303.1| hypothetical protein LPW_30001 [Legionella pneumophila 130b]
gi|364509448|gb|AEW52972.1| oligoribonuclease [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|395128747|emb|CCD06965.1| oligoribonuclease [Legionella pneumophila subsp. pneumophila]
gi|395131829|emb|CCD10122.1| oligoribonuclease [Legionella pneumophila subsp. pneumophila]
Length = 187
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ E DRI+E+A I+TD +L EGP + + Q K LDSM W H
Sbjct: 7 LIWIDLEMTGLEPEQDRIIEMATIVTDPQLNILAEGPVIAVSQPKILLDSMDAWNTKQHN 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+VL S ++E +AE+ +EF+K+ V + GNS+ D FL KYMP+LA+ F
Sbjct: 67 QSGLVKRVLESNVSESQAEQLTIEFLKQYVDKGKSPMCGNSICQDRRFLYKYMPELAAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSS+K L +RW P V KE KH ALDDI++SI EL YY+++
Sbjct: 127 HYRNLDVSSLKELVLRWRPELMNGV-VKESKHLALDDIKDSINELIYYRQHFI 178
>gi|377821398|ref|YP_004977769.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp. YI23]
gi|357936233|gb|AET89792.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp. YI23]
Length = 200
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
M LVW+D+EMTGL + DRI+EIA ++T+ L K VEGP L IHQT E L M EW +N
Sbjct: 20 MNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDKMVEGPVLAIHQTDEALGRMDEWNRNT 79
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
H SGLT++V S + E EA +Q+ +F+ + V + GNS+ D F+ ++MP+L +
Sbjct: 80 HGRSGLTERVKASTVDEAEATRQIRDFLGQYVPPGKSPMCGNSICQDRRFMARWMPELET 139
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E+
Sbjct: 140 FFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYREHFL 193
>gi|359442620|ref|ZP_09232483.1| oligoribonuclease [Pseudoalteromonas sp. BSi20429]
gi|392534623|ref|ZP_10281760.1| oligoribonuclease [Pseudoalteromonas arctica A 37-1-2]
gi|358035491|dbj|GAA68732.1| oligoribonuclease [Pseudoalteromonas sp. BSi20429]
Length = 181
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ+ E L+ M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSDELLNGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A +Q + F+K+ V T + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTFDEAYAVEQTLAFLKQWVPAGTSPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P KV +K+ H ALDDI++SIMELK Y+EN F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLAKV-NKKGSHLALDDIKDSIMELKVYRENFF 179
>gi|397730767|ref|ZP_10497523.1| oligoribonuclease [Rhodococcus sp. JVH1]
gi|396933389|gb|EJJ00543.1| oligoribonuclease [Rhodococcus sp. JVH1]
Length = 202
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++EIA ++TD +L EG D+VIH + L +M + HE
Sbjct: 8 LVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVTKMHE 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE+QV+ +++++V T LAGNS+ D F+ + MPDL +
Sbjct: 68 NSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPDLDTY 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DI+ESI ELKYY++ F
Sbjct: 128 LHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIKESIRELKYYRKTAF 181
>gi|365869511|ref|ZP_09409058.1| oligoribonuclease [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|420898108|ref|ZP_15361444.1| oligoribonuclease [Mycobacterium abscessus 5S-0817]
gi|363998968|gb|EHM20174.1| oligoribonuclease [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392107349|gb|EIU33131.1| oligoribonuclease [Mycobacterium abscessus 5S-0817]
Length = 208
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 8 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T +EAE V+++++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 68 KSGLTQEVRTSVVTLQEAEAMVLDYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 128 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 181
>gi|312795486|ref|YP_004028408.1| oligoribonuclease [Burkholderia rhizoxinica HKI 454]
gi|312167261|emb|CBW74264.1| Oligoribonuclease (EC 3.1.-.-) [Burkholderia rhizoxinica HKI 454]
Length = 204
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 56 QQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTK 115
QQ P+ + + L+W+D+EMTGL DRI+E+A ++TD LT VEGP L IHQ+
Sbjct: 6 QQPGGQPVLAKSEFNLIWLDMEMTGLLPNTDRIIEVAVVVTDSNLTVVVEGPVLAIHQSD 65
Query: 116 ECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVD 175
LD+M +W +N H SGL ++V S +TE +A Q++ F+ + V + GNS+ D
Sbjct: 66 STLDAMDQWNKNTHGRSGLIERVRASSVTEADAAAQLLAFLSQYVPAGKSPMCGNSICQD 125
Query: 176 FMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMEL 235
F+ ++MP+L + F + +DVS++K LC RW P Y+ K H AL DI ESI EL
Sbjct: 126 RRFMARWMPELEAFFHYRNLDVSTLKELCRRWQPAVYKGF-QKRALHTALADIHESIDEL 184
Query: 236 KYYKENIFKT 245
KYY+E+ +
Sbjct: 185 KYYREHFLRA 194
>gi|270158079|ref|ZP_06186736.1| oligoribonuclease [Legionella longbeachae D-4968]
gi|289163655|ref|YP_003453793.1| oligoribonuclease [Legionella longbeachae NSW150]
gi|269990104|gb|EEZ96358.1| oligoribonuclease [Legionella longbeachae D-4968]
gi|288856828|emb|CBJ10639.1| oligoribonuclease [Legionella longbeachae NSW150]
Length = 185
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+E+A ++TD L EGP I Q+K LD M W H
Sbjct: 7 LIWIDLEMTGLNPEQDRIIELATVVTDPHLNIIAEGPVFAISQSKVLLDGMDSWNTKQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+VL S + E +AEK+ +EF+K+ + + GNS+ D FL KYMPDLAS F
Sbjct: 67 QSGLVKRVLESDVNEAQAEKRTIEFLKQYLDKGKSPMCGNSICQDRRFLYKYMPDLASFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L +RW P V KE KH ALDDI++SI EL YY+++
Sbjct: 127 HYRNLDVSTLKELAVRWRPELLNGV-VKESKHLALDDIKDSIAELVYYRKHFI 178
>gi|414581872|ref|ZP_11439012.1| oligoribonuclease [Mycobacterium abscessus 5S-1215]
gi|420882623|ref|ZP_15345987.1| oligoribonuclease [Mycobacterium abscessus 5S-0421]
gi|392091678|gb|EIU17489.1| oligoribonuclease [Mycobacterium abscessus 5S-0421]
gi|392117024|gb|EIU42792.1| oligoribonuclease [Mycobacterium abscessus 5S-1215]
Length = 251
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 51 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 110
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T +EAE V+++++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 111 KSGLTQEVRTSVVTLQEAEAMVLDYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 170
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 171 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 224
>gi|358012643|ref|ZP_09144453.1| oligoribonuclease [Acinetobacter sp. P8-3-8]
Length = 185
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA I+TD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIVTDDHLNILAEGPVLAVHQSDLILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V T + GNS+ D F+ + MP+L F
Sbjct: 69 QSGLIERVRRSKLTAQDAEQQTIEFLKKWVNPKTSPMCGNSICQDRRFMHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY++ F TN
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYRQYFFITN 183
>gi|162455935|ref|YP_001618302.1| oligoribonuclease [Sorangium cellulosum So ce56]
gi|161166517|emb|CAN97822.1| oligoribonuclease [Sorangium cellulosum So ce56]
Length = 187
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 114/174 (65%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL I+EIA I+T+ LT EGP LVIHQ + L M ++ ++ HE
Sbjct: 8 MVWVDLEMTGLDESSCAIVEIATIVTEPDLTVVAEGPCLVIHQPESVLAGMSDFVRDLHE 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +++ S L+ +AE + F++ + T +L GNSV+ D FL++YMP+L S
Sbjct: 68 RSGLLERIRASTLSVGDAESETRAFLEAHCDKGTAVLCGNSVWKDRAFLQRYMPELLSFL 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS++K L RWYP R P K + HRALDDIRESI EL++Y+ N+F+
Sbjct: 128 HYRIVDVSTLKELVRRWYP--LRAAPKKREIHRALDDIRESIEELRWYRANVFQ 179
>gi|319948005|ref|ZP_08022182.1| oligoribonuclease [Dietzia cinnamea P4]
gi|319438351|gb|EFV93294.1| oligoribonuclease [Dietzia cinnamea P4]
Length = 222
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 13/209 (6%)
Query: 37 KSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIIT 96
+S +++ A SSS + +N + +VWID EMTGL D+++EIA ++T
Sbjct: 3 ESTSAETAAPSSSPTPHQESKNDR----------IVWIDCEMTGLDTTNDKLVEIAALVT 52
Query: 97 DGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFV 156
D L EG D+VIH + LD+M ++ H +SGLT+++ S +T EAEK V+++V
Sbjct: 53 DSDLNVLGEGVDIVIHASDAALDAMVPVVRDMHASSGLTEEIRRSTVTVAEAEKAVLDYV 112
Query: 157 KK--NVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRK 214
+ V PL AGNS+ D FL + MP+L S + ++DVSSIK LC RWYPR Y
Sbjct: 113 RAWVPVAGSAPL-AGNSIGTDRGFLARDMPELNSYLHYRMIDVSSIKELCRRWYPRIYFG 171
Query: 215 VPSKEQKHRALDDIRESIMELKYYKENIF 243
P K HRAL DI+ESI EL+YY+ F
Sbjct: 172 QPEKGMSHRALADIKESIRELQYYRATAF 200
>gi|127511493|ref|YP_001092690.1| oligoribonuclease [Shewanella loihica PV-4]
gi|166216587|sp|A3QAD3.1|ORN_SHELP RecName: Full=Oligoribonuclease
gi|126636788|gb|ABO22431.1| Exonuclease, RNase T and DNA polymerase III [Shewanella loihica
PV-4]
Length = 181
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ EVDRI+EIA I+TD +L EGP + IHQ+++ L +M +W Q HH
Sbjct: 8 LIWVDLEMTGLEPEVDRIIEIATIVTDKELNILAEGPVIAIHQSEDVLAAMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +E++A +Q + F+ ++V + GNS+ D FL +YMP L F
Sbjct: 68 ESGLIDRVRASDFSEQDAIEQTIAFLSEHVPAGVSPMCGNSIGQDRRFLNRYMPTLEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSS+K L RW P + K+ H+AL DI+ESI EL+YY+E +FK
Sbjct: 128 HYRNIDVSSVKELVRRWRP-EVMDGFKKQGTHQALVDIQESIAELRYYREKVFK 180
>gi|348617891|ref|ZP_08884425.1| Oligoribonuclease [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816835|emb|CCD29079.1| Oligoribonuclease [Candidatus Glomeribacter gigasporarum BEG34]
Length = 200
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 111/176 (63%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EM+GL+ E DRILEIA ++TD L ++EGP L +HQ+ E L+ M W Q H
Sbjct: 21 LVWLDMEMSGLRPEADRILEIAVVVTDSSLDIAIEGPALALHQSDEVLEGMDSWNQKMHG 80
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L E++A +Q++ F+ + V L GNSV D F+ ++MPD + F
Sbjct: 81 RSGLIERVRASALNEQDAAEQLLAFLNRYVPPGKSPLCGNSVCQDRRFMARWMPDFEAFF 140
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K LC RW P YR K H A DI+ESI ELKYY+E+ + +
Sbjct: 141 HYRNLDVSTLKELCRRWRPALYRGF-HKHGLHTAQADIQESIAELKYYREHFIRLD 195
>gi|420876762|ref|ZP_15340134.1| oligoribonuclease [Mycobacterium abscessus 5S-0304]
gi|420888085|ref|ZP_15351439.1| oligoribonuclease [Mycobacterium abscessus 5S-0422]
gi|420893268|ref|ZP_15356610.1| oligoribonuclease [Mycobacterium abscessus 5S-0708]
gi|420904067|ref|ZP_15367388.1| oligoribonuclease [Mycobacterium abscessus 5S-1212]
gi|420970818|ref|ZP_15434015.1| oligoribonuclease [Mycobacterium abscessus 5S-0921]
gi|421048373|ref|ZP_15511369.1| oligoribonuclease [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392090439|gb|EIU16252.1| oligoribonuclease [Mycobacterium abscessus 5S-0304]
gi|392092645|gb|EIU18450.1| oligoribonuclease [Mycobacterium abscessus 5S-0422]
gi|392101858|gb|EIU27645.1| oligoribonuclease [Mycobacterium abscessus 5S-0708]
gi|392109325|gb|EIU35103.1| oligoribonuclease [Mycobacterium abscessus 5S-1212]
gi|392171790|gb|EIU97463.1| oligoribonuclease [Mycobacterium abscessus 5S-0921]
gi|392242538|gb|EIV68025.1| oligoribonuclease [Mycobacterium massiliense CCUG 48898]
Length = 246
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG L EG D+VIH L +M + H
Sbjct: 46 LVWIDCEMTGLDLGSDKLIEIAALVTDGDLNILGEGVDVVIHADDAALAAMPPVVADMHA 105
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T +EAE V+++++++V + T LAGNS+ D F+ + MP+L +
Sbjct: 106 KSGLTQEVRTSVVTLQEAEAMVLDYIRQHVASAKTAPLAGNSIATDRGFIARDMPELDAF 165
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 166 LHYRMIDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIKESIRELRYYRRAAF 219
>gi|350529563|ref|ZP_08908504.1| oligoribonuclease [Vibrio rotiferianus DAT722]
Length = 181
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S ++E++A Q ++F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVERVRNSDVSEQDAVAQTIKFLEEWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H ALDDIRESI EL+YY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLNGF-SKQGTHLALDDIRESIAELRYYRETIFK 180
>gi|359453798|ref|ZP_09243101.1| oligoribonuclease [Pseudoalteromonas sp. BSi20495]
gi|358049114|dbj|GAA79350.1| oligoribonuclease [Pseudoalteromonas sp. BSi20495]
Length = 181
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ E L+ M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQNDELLNGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A +Q + F+K+ V T + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTFDEAYAVEQTLAFLKQWVPAGTSPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P KV +K+ H ALDDI++SIMELK Y+EN F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLAKV-NKKGSHLALDDIKDSIMELKIYRENFF 179
>gi|372270431|ref|ZP_09506479.1| oligoribonuclease [Marinobacterium stanieri S30]
Length = 180
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL + DRI+E+A I+TD L EGP + +HQ L MGEWC H
Sbjct: 7 LIWVDLEMTGLNPDTDRIIEMAAIVTDSDLNLIAEGPVIAVHQADTVLSHMGEWCTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S ++E EAE+Q++ F++++ + GNS+ D FL +YMP+L + F
Sbjct: 67 QSGLTDRVRASKISETEAEQQMLAFLRQHSEKGVSPMCGNSIGQDRRFLWRYMPELEAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSSIK L RW P + K+ H ALDDIRESI EL++Y+ + F+
Sbjct: 127 HYRNLDVSSIKELAKRWKP-EVMDGFRKQGTHLALDDIRESIEELRHYRRHFFR 179
>gi|227503970|ref|ZP_03934019.1| oligoribonuclease [Corynebacterium striatum ATCC 6940]
gi|227199438|gb|EEI79486.1| oligoribonuclease [Corynebacterium striatum ATCC 6940]
Length = 210
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 108/177 (61%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + I+E+A IITDG L EG DLV+H T+ L M ++ N H
Sbjct: 11 LVWIDLEMTGLDPKRHVIVEVAAIITDGNLNVIGEGIDLVVHATEAELAEMDDFVTNMHA 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGL K++ S T REAE V+ + ++ P LAGNS+ D F++ YMP L
Sbjct: 71 NSGLDKEIRESTTTLREAEDAVLALIAEHCNPEHPAPLAGNSIATDRTFIRAYMPRLDEA 130
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RW+PR Y P K HRAL DI ESI EL YY+ ++F+T+
Sbjct: 131 LHYRMIDVSTIKELSRRWFPRAYYNQPDKGMAHRALQDIIESIRELDYYRRSVFRTD 187
>gi|433551878|ref|ZP_20507918.1| 3'-to-5' oligoribonuclease (orn) [Yersinia enterocolitica IP 10393]
gi|431787176|emb|CCO70958.1| 3'-to-5' oligoribonuclease (orn) [Yersinia enterocolitica IP 10393]
Length = 257
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 135/249 (54%), Gaps = 20/249 (8%)
Query: 4 LSNAFSVLELDADDSQVKTPAAASSS--SSSSSSCKSVESKSK-----ANSSSNLTLENQ 56
L +AF + L+A + TP S ++ + + S ++ + + N+ ENQ
Sbjct: 22 LESAFILFILEASEWLAATPLTLGMSLVATKKAMIHIILSINRLFGSLPSQAGNIMAENQ 81
Query: 57 QNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
N L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E
Sbjct: 82 NN------------LIWIDLEMTGLDPEKDRIIEIATLVTDANLNILAEGPVLAVHQSDE 129
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDF 176
L M EW H SGL ++V S + +AE Q +EF+K+ V T + GNSV D
Sbjct: 130 QLGLMDEWNVRTHTGSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPICGNSVGQDR 189
Query: 177 MFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELK 236
FL +YMP+L + F + +DVS++K L RW P K+ H+ALDDIRES+ EL
Sbjct: 190 RFLFRYMPELEAYFHYRYLDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELA 248
Query: 237 YYKENIFKT 245
YY+E+ ++
Sbjct: 249 YYREHFIQS 257
>gi|409391085|ref|ZP_11242777.1| oligoribonuclease [Gordonia rubripertincta NBRC 101908]
gi|403198898|dbj|GAB86011.1| oligoribonuclease [Gordonia rubripertincta NBRC 101908]
Length = 199
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TDG L +G D+VIH E L SM + H
Sbjct: 5 LVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDEALASMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAEK V+++++K+V T + LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTEEVRASTVTLVEAEKLVLDYIRKHVTTPGAVPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RW+P+ Y P K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSIKELARRWFPKVYFGQPDKGLAHRALADIRESIRELRYYRAAAF 178
>gi|21957334|gb|AAM84211.1|AE013664_6 hypothetical protein y0623 [Yersinia pestis KIM10+]
gi|45435231|gb|AAS60791.1| Oligoribonuclease (3'->5' exoribonuclease) [Yersinia pestis biovar
Microtus str. 91001]
Length = 230
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 114/197 (57%), Gaps = 13/197 (6%)
Query: 49 SNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPD 108
N+ ENQ N L+WIDLEMTGL E DRI+EIA ++TD L EGP
Sbjct: 47 GNIMAENQNN------------LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPV 94
Query: 109 LVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLA 168
L +HQ+ E L M EW H SGL ++V S +R+AE Q +EF+K+ V +
Sbjct: 95 LAVHQSAEQLGLMDEWNVRTHTGSGLVERVKASPFNDRDAELQTIEFLKQWVPAGVSPIC 154
Query: 169 GNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDI 228
GNSV D FL +YMP+L + F + VDVS++K L RW P K+ H+ALDDI
Sbjct: 155 GNSVGQDRRFLFRYMPELEAYFHYRYVDVSTLKELARRWKPEILAGF-KKQNTHQALDDI 213
Query: 229 RESIMELKYYKENIFKT 245
RES+ EL YY+E+ ++
Sbjct: 214 RESVAELAYYREHFIQS 230
>gi|145600855|ref|YP_001164931.1| oligoribonuclease [Yersinia pestis Pestoides F]
gi|108777113|gb|ABG19632.1| oligoribonuclease [Yersinia pestis Nepal516]
gi|108781821|gb|ABG15879.1| oligoribonuclease [Yersinia pestis Antiqua]
gi|145212551|gb|ABP41958.1| oligoribonuclease [Yersinia pestis Pestoides F]
Length = 227
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 114/197 (57%), Gaps = 13/197 (6%)
Query: 49 SNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPD 108
N+ ENQ N L+WIDLEMTGL E DRI+EIA ++TD L EGP
Sbjct: 44 GNIMAENQNN------------LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPV 91
Query: 109 LVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLA 168
L +HQ+ E L M EW H SGL ++V S +R+AE Q +EF+K+ V +
Sbjct: 92 LAVHQSAEQLGLMDEWNVRTHTGSGLVERVKASPFNDRDAELQTIEFLKQWVPAGVSPIC 151
Query: 169 GNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDI 228
GNSV D FL +YMP+L + F + VDVS++K L RW P K+ H+ALDDI
Sbjct: 152 GNSVGQDRRFLFRYMPELEAYFHYRYVDVSTLKELARRWKPEILAGF-KKQNTHQALDDI 210
Query: 229 RESIMELKYYKENIFKT 245
RES+ EL YY+E+ ++
Sbjct: 211 RESVAELAYYREHFIQS 227
>gi|413958554|ref|ZP_11397793.1| oligoribonuclease [Burkholderia sp. SJ98]
gi|413941134|gb|EKS73094.1| oligoribonuclease [Burkholderia sp. SJ98]
Length = 202
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
M LVW+D+EMTGL + DRI+EIA ++T+ L K VEGP L IHQT+E L M EW +N
Sbjct: 20 MNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDKIVEGPVLAIHQTEEALGRMDEWNRNT 79
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
H SGLT++V S + E EA +Q+ +F+ V + GNS+ D F+ ++MP+L +
Sbjct: 80 HGRSGLTERVKASTVDEAEATRQIRDFLGAYVPPGKSPMCGNSICQDRRFMARWMPELET 139
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+++
Sbjct: 140 FFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYRQHFL 193
>gi|416076629|ref|ZP_11585626.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|348004769|gb|EGY45266.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
Length = 182
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L I Q L+ M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIRQPDALLNKMSEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LT+ AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTANGLIERVKASKLTKHAAELQTLDFLKKYVPKGASPICGNSVAQDKRFLFKYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P D +K+ H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWRP-DILNGFNKQNTHLALDDIRESIKELAYYREHFLKMD 182
>gi|169752556|gb|ACA70074.1| Exonuclease RNase T and DNA polymerase III [Yersinia
pseudotuberculosis YPIII]
gi|186696803|gb|ACC87432.1| Exonuclease RNase T and DNA polymerase III [Yersinia
pseudotuberculosis PB1/+]
Length = 227
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 114/197 (57%), Gaps = 13/197 (6%)
Query: 49 SNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPD 108
N+ ENQ N L+WIDLEMTGL E DRI+EIA ++TD L EGP
Sbjct: 44 GNIMAENQNN------------LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPV 91
Query: 109 LVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLA 168
L +HQ+ E L M EW H SGL ++V S +R+AE Q +EF+K+ V +
Sbjct: 92 LAVHQSAEQLGLMDEWNVRTHTGSGLVERVKTSPFNDRDAELQTIEFLKQWVPAGVSPIC 151
Query: 169 GNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDI 228
GNSV D FL +YMP+L + F + VDVS++K L RW P K+ H+ALDDI
Sbjct: 152 GNSVGQDRRFLFRYMPELEAYFHYRYVDVSTLKELARRWKPEILAGF-KKQNTHQALDDI 210
Query: 229 RESIMELKYYKENIFKT 245
RES+ EL YY+E+ ++
Sbjct: 211 RESVAELAYYREHFIQS 227
>gi|444376994|ref|ZP_21176231.1| 3'-to-5' oligoribonuclease (orn) [Enterovibrio sp. AK16]
gi|443678879|gb|ELT85542.1| 3'-to-5' oligoribonuclease (orn) [Enterovibrio sp. AK16]
Length = 181
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL EV +++EIA ++TD +L EGP L IHQ+ E L M EWC N H
Sbjct: 8 LIWIDLEMTGLDPEVHKVIEIATVVTDAELNVLAEGPVLAIHQSDEELAKMDEWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +A KQ + F++ V + GNSV D FL K+MP+L F
Sbjct: 68 GSGLVDRVKASTVSETDAIKQTIAFLQDWVPAGVSPICGNSVGQDRRFLYKHMPELERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS+IK L RW P + K+ H ALDDIRESI EL+YY+ IF
Sbjct: 128 HYRTVDVSTIKELVRRWEPEVLSGI-KKQGTHLALDDIRESIEELRYYRSKIF 179
>gi|414072604|ref|ZP_11408538.1| oligoribonuclease [Pseudoalteromonas sp. Bsw20308]
gi|410804967|gb|EKS10999.1| oligoribonuclease [Pseudoalteromonas sp. Bsw20308]
Length = 181
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ E L+ M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQNDELLNGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A Q ++F+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTFDEEHAVAQTLDFLKQWVPAGVSPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P KV +K+ H ALDDI++SIMELK Y+EN F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLAKV-NKKGSHLALDDIKDSIMELKIYRENFF 179
>gi|170717217|ref|YP_001784337.1| oligoribonuclease [Haemophilus somnus 2336]
gi|168825346|gb|ACA30717.1| Exonuclease RNase T and DNA polymerase III [Haemophilus somnus
2336]
Length = 184
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + +RI+EIA I+TD L EGP L IHQ+ E L++M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPDKERIIEIATIVTDKDLNILAEGPVLAIHQSNELLNNMNEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H ++GL ++V +S LTER AE Q ++F+KK V + GNSV D FL YMP+LA
Sbjct: 65 THTSNGLIERVKNSKLTERAAELQTLDFLKKWVPKGVSPICGNSVAQDKRFLINYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
F + +DVS++K L RW P K+ H ALDDIRESI EL +Y+
Sbjct: 125 EYFHYRHLDVSTLKELASRWKPEILNSF-EKKNSHLALDDIRESIAELAHYR 175
>gi|359299549|ref|ZP_09185388.1| oligoribonuclease [Haemophilus [parainfluenzae] CCUG 13788]
Length = 182
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L + Q+ E L M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAVKQSDELLAKMSDWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S LTER AE Q ++F+K+ V + GNSV D FL KYMPDLA
Sbjct: 65 THTENGLIERVKASKLTERAAELQTLDFLKRWVPKGASPICGNSVAQDKRFLFKYMPDLA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P + K K+ H ALDDIRESI ELK+Y+E+ + +
Sbjct: 125 DYFYYRHLDVSTLKELASRWKP-EMLKGFKKQNTHLALDDIRESINELKFYREHFIRLD 182
>gi|209522085|ref|ZP_03270737.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp. H160]
gi|209497475|gb|EDZ97678.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp. H160]
Length = 251
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 113/184 (61%), Gaps = 2/184 (1%)
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
Q PL M LVW+D+EMTGL+ + DRI+EIA ++T+ L + VEGP L IHQ+ E L
Sbjct: 58 QPPL-VRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLA 116
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFL 179
M EW QN H SGL +V S ++E +A Q+ EF+ + V + GNS+ D F+
Sbjct: 117 KMDEWNQNTHGRSGLIDRVKASTVSEADATAQIREFLGQYVPPGKSPMCGNSICQDRRFM 176
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
++MP+L S F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+
Sbjct: 177 ARWMPELESFFHYRNLDVSTLKELCRRWQPVIYKGF-QKRAMHTALADIHESIDELKYYR 235
Query: 240 ENIF 243
E+
Sbjct: 236 EHFL 239
>gi|113461243|ref|YP_719312.1| oligoribonuclease [Haemophilus somnus 129PT]
gi|112823286|gb|ABI25375.1| oligoribonuclease [Haemophilus somnus 129PT]
Length = 184
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + +RI+EIA I+TD L EGP L IHQ+ E L++M EWC
Sbjct: 5 KQNLIWIDLEMTGLDPDKERIIEIATIVTDKDLNILAEGPVLAIHQSNELLNNMNEWCVK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H ++GL ++V +S LTER AE Q ++F+KK V + GNSV D FL YMP+LA
Sbjct: 65 THTSNGLIERVKNSKLTERAAELQTLDFLKKWVPKGVSPICGNSVAQDKRFLVNYMPELA 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
F + +DVS++K L RW P K+ H ALDDIRESI EL +Y+
Sbjct: 125 EYFHYRHLDVSTLKELASRWKPEILNSF-EKKNTHLALDDIRESIAELAHYR 175
>gi|226952875|ref|ZP_03823339.1| oligoribonuclease [Acinetobacter sp. ATCC 27244]
gi|226836386|gb|EEH68769.1| oligoribonuclease [Acinetobacter sp. ATCC 27244]
Length = 186
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIITDDNLNILAEGPVLAVHQSDVILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V + + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLTAQDAEQQTLEFLKKWVNPKSSPMCGNSICQDRRFLHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 249
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N K
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIMNSNK 186
>gi|254427614|ref|ZP_05041321.1| exonuclease superfamily [Alcanivorax sp. DG881]
gi|196193783|gb|EDX88742.1| exonuclease superfamily [Alcanivorax sp. DG881]
Length = 181
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L EGP L +HQ+ LD M EW HH
Sbjct: 8 LIWIDLEMTGLSPENDRIIEIATIVTDAELNVLAEGPVLAVHQSDALLDGMDEWNTTHHN 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + + AE Q + F+++ V + GNS+ D FL YMP L + F
Sbjct: 68 NSGLVARVKASMVNDAAAESQTIAFLEQYVEAGMSPMCGNSICQDRRFLANYMPQLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SKE KH ALDDIRESI EL YY+E+
Sbjct: 128 HYRNLDVSTLKELARRWKPEILPGF-SKENKHLALDDIRESIAELVYYREHFI 179
>gi|195392333|ref|XP_002054812.1| GJ24646 [Drosophila virilis]
gi|194152898|gb|EDW68332.1| GJ24646 [Drosophila virilis]
Length = 187
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 110/174 (63%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL I+ D+ILE+ACIITD +L E I + ++M EWC HH
Sbjct: 14 IVWMDLEMTGLSIDKDQILEVACIITDKQLNIKAECLCFAIRHPPQVYNNMNEWCIKHHN 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K S +T AE ++ F+K+ + LAGNS+Y+D +F++K+ P +
Sbjct: 74 ESGLIDKCKESDVTPELAENIILSFLKQYIPEKKCPLAGNSIYMDRLFIRKFYPAVDEYL 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVS++K L RW+PR + K+ HR+LDDI +SI ELKYYKE++FK
Sbjct: 134 HYRIIDVSTVKELATRWHPRVIQAAAQKKLAHRSLDDIMDSIAELKYYKEHLFK 187
>gi|332536010|ref|ZP_08411688.1| oligoribonuclease [Pseudoalteromonas haloplanktis ANT/505]
gi|332034620|gb|EGI71185.1| oligoribonuclease [Pseudoalteromonas haloplanktis ANT/505]
Length = 181
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ+ E L+ M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSDELLNGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A Q ++F+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTFDEEYAVAQTLDFLKQWVPAGVSPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P KV +K+ H ALDDI++SIMELK Y+EN F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLAKV-NKKGSHLALDDIKDSIMELKVYRENFF 179
>gi|336177462|ref|YP_004582837.1| oligoribonuclease [Frankia symbiont of Datisca glomerata]
gi|334858442|gb|AEH08916.1| Oligoribonuclease [Frankia symbiont of Datisca glomerata]
Length = 270
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D +LE+AC++TD +L G D+V+ + L M Q H
Sbjct: 4 LVWIDCEMTGLDAASDLLLEVACLVTDSELNILGGGVDVVVSAPETALAGMDAVVQQMHA 63
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT+ V S LT +AE+QV+++V+ + PL GNS+ D FL +YMP L S
Sbjct: 64 TSGLTEAVRASTLTVADAERQVLDYVRDQIPDAGKAPLC-GNSIATDRNFLARYMPALDS 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVS++K L RWYPR Y P+K HRAL DI+ESI EL+YY++ IF
Sbjct: 123 YLHYRMVDVSTVKELARRWYPRAYYAAPAKRGGHRALADIQESIDELRYYRKAIF 177
>gi|254448875|ref|ZP_05062331.1| oligoribonuclease [gamma proteobacterium HTCC5015]
gi|198261565|gb|EDY85854.1| oligoribonuclease [gamma proteobacterium HTCC5015]
Length = 185
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL D I+EIA I+TD L EGP L IHQ +D M EW H
Sbjct: 12 LIWIDLEMTGLDTVNDEIIEIATIVTDKALNVIAEGPMLAIHQPDAVMDGMDEWNTRQHG 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V +S + +EAE+Q +EF+++ VG + GNS+ D F+ + MP L + F
Sbjct: 72 QSGLTERVKNSDVNMQEAERQTIEFLEQYVGARKSPMCGNSICQDRRFMARQMPQLEAYF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K K+ KH ALDDIR+SI EL+YY++ + K
Sbjct: 132 HYRNLDVSTLKELVTRWAP-DVHKGFVKQGKHLALDDIRDSIEELRYYRQTVMK 184
>gi|295677244|ref|YP_003605768.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1002]
gi|295437087|gb|ADG16257.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1002]
Length = 203
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 113/184 (61%), Gaps = 2/184 (1%)
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
Q PL M LVW+D+EMTGL+ + DRI+EIA ++T+ L + VEGP L IHQ+ E L
Sbjct: 10 QPPL-VRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLA 68
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFL 179
M EW QN H SGL +V S ++E +A Q+ EF+ + V + GNS+ D F+
Sbjct: 69 KMDEWNQNTHGRSGLIDRVKVSTVSEADATAQIREFLGQYVPPGKSPMCGNSICQDRRFM 128
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
++MPDL S F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+
Sbjct: 129 ARWMPDLESFFHYRNLDVSTLKELCRRWQPVIYKGF-QKRAMHTALADIHESIDELKYYR 187
Query: 240 ENIF 243
E+
Sbjct: 188 EHFL 191
>gi|444344965|ref|ZP_21153089.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
gi|443542439|gb|ELT52768.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
Length = 204
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L I Q L+ M EWC
Sbjct: 27 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIRQPDALLNKMSEWCVK 86
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H A+GL ++V S LT+ AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 87 THTANGLIERVKASKLTKHAAELQTLDFLKKYVPKGASPICGNSVAQDKRFLFKYMPELA 146
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
F + +DVS++K L RW P D +K+ H ALDDIRESI EL YY+E+ K +
Sbjct: 147 DYFHYRHLDVSTLKELAARWRP-DILNGFNKQNTHLALDDIRESIKELAYYREHFLKMD 204
>gi|294649278|ref|ZP_06726713.1| exoribonuclease II [Acinetobacter haemolyticus ATCC 19194]
gi|292824831|gb|EFF83599.1| exoribonuclease II [Acinetobacter haemolyticus ATCC 19194]
Length = 186
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIITDDNLNILAEGPVLAVHQSDVILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V + + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLTAQDAEQQTLEFLKKWVNPKSSPMCGNSICQDRRFLHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIMN 183
>gi|392552530|ref|ZP_10299667.1| oligoribonuclease [Pseudoalteromonas spongiae UST010723-006]
Length = 181
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ DRILEIA ++TD +L EGP + +HQ+ E L M EWC N H
Sbjct: 8 LIWLDLEMTGLEPSQDRILEIATVVTDSELNVLAEGPVIAVHQSDEVLAGMDEWCTNQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +E A ++ + F++K V + GNS+ D FL YM +L F
Sbjct: 68 NSGLTERVRKSKHSEEMAIRETIAFLEKWVPKGVSPMCGNSIGQDRRFLNVYMRELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSSIK L RW P D + K+ H ALDDIRESI EL+ Y++NIFK
Sbjct: 128 HYRNIDVSSIKELVRRWSP-DMLNLVKKQGTHLALDDIRESIAELRVYRQNIFK 180
>gi|433603076|ref|YP_007035445.1| Oligoribonuclease [Saccharothrix espanaensis DSM 44229]
gi|407880929|emb|CCH28572.1| Oligoribonuclease [Saccharothrix espanaensis DSM 44229]
Length = 198
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 72 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEA 131
+WID EMTGL + D ++EIA ++TD +LT EG D+VIH LDSM E H
Sbjct: 1 MWIDCEMTGLDLGKDALIEIAALVTDAELTVLGEGVDVVIHADDPALDSMPEIVTAMHAK 60
Query: 132 SGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +T EAE+QV+ ++K+ V T LAGNS+ D F+ + MP L +
Sbjct: 61 SGLTEEVRRSTVTLAEAEEQVLAYIKQWVPDPRTAPLAGNSIATDRGFIARDMPVLDAHL 120
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DIRESI EL YY+ F
Sbjct: 121 HYRMVDVSSIKELCRRWYPRIYYAQPEKGLAHRALADIRESIRELAYYRRTAF 173
>gi|451982317|ref|ZP_21930635.1| oligoribonuclease [Nitrospina gracilis 3/211]
gi|451760482|emb|CCQ91919.1| oligoribonuclease [Nitrospina gracilis 3/211]
Length = 193
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL + + I+EIA I+TD +L EGP LVIHQ L+ M +W Q H
Sbjct: 9 LVWMDLEMTGLDPDKEEIIEIATIVTDSQLNILAEGPCLVIHQDDAILERMDDWNQKTHS 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +KV S LT EAE++ ++F+K+ V T L GNS+ D FL +YM +L
Sbjct: 69 ASGLIQKVKESTLTVEEAEQRTLDFIKQYVPYKTSPLCGNSIQQDRRFLDRYMKNLTDYL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DV+SIK + RWYP R +P K H AL D+RESI EL +Y+ N F
Sbjct: 129 HYRNIDVTSIKEVIRRWYPNGTR-LPKKSDAHMALTDVRESIEELIFYRNNFF 180
>gi|328710082|ref|XP_001950486.2| PREDICTED: oligoribonuclease, mitochondrial-like [Acyrthosiphon
pisum]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 122/205 (59%), Gaps = 12/205 (5%)
Query: 35 SCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACI 94
+ S+ + K ++ N T+ N+ N +VW D EMTGL ++E A I
Sbjct: 15 TISSLNFRRKMSTEINPTMNNEHN------------IVWFDGEMTGLDCNHHTLIEAAII 62
Query: 95 ITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVE 154
ITD L E P+++IHQ+ + L++M EW + HH SGLT+ V S ++ +A++ + E
Sbjct: 63 ITDKNLKVLAESPNIIIHQSDKVLENMEEWSKKHHGISGLTENVRKSNISIEQADQMLYE 122
Query: 155 FVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRK 214
F+K LAGNS+++D F++KYMP L S S+ L+DVS++K L RW P +
Sbjct: 123 FIKPFAPKGVCPLAGNSIHMDRTFIRKYMPKLESHLSYRLIDVSTLKELLKRWKPELANE 182
Query: 215 VPSKEQKHRALDDIRESIMELKYYK 239
VP K KHRALDDI+ES+ EL++YK
Sbjct: 183 VPIKSGKHRALDDIKESVQELQFYK 207
>gi|427795697|gb|JAA63300.1| Putative oligoribonuclease 3'---> 5' exoribonuclease, partial
[Rhipicephalus pulchellus]
Length = 279
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+E+TGL +E D ILE+AC++TD L G +LV+HQ + L MGEWCQ HH
Sbjct: 89 LVWIDMELTGLDLEKDHILEVACVVTDKDLNAISGGLNLVLHQPDDVLAKMGEWCQEHHG 148
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ S LT +EAE Q+ +V V LAG++VY+D FL + MP L +L
Sbjct: 149 KSGLTEACRKSHLTVKEAEDQLCAYVGGLVMPGQCPLAGSTVYMDRRFLLRDMPRLDALL 208
Query: 191 SHVLVDVSSIKALCMRWYPRD-YRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVS++K L RW+ + Y+ + K HRA+ DI ESI ELK+Y++ I
Sbjct: 209 HYRIVDVSTVKELARRWFREEYYQALKLKTASHRAMPDILESIEELKFYRKKIL 262
>gi|149910187|ref|ZP_01898833.1| Oligoribonuclease [Moritella sp. PE36]
gi|149806773|gb|EDM66737.1| Oligoribonuclease [Moritella sp. PE36]
Length = 188
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E I+EIA I+TD +L EGP L IHQ K LD M EWC HH
Sbjct: 15 LVWIDLEMTGLDPEKCLIIEIATIVTDSELNILAEGPVLAIHQDKAELDKMDEWCTTHHT 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+VL S +TE+EA +Q + F+ K V L GNS+ D FL KYM +L F
Sbjct: 75 NSGLVKRVLASEVTEKEAVEQTLAFLHKWVPAGKSPLCGNSIGQDRRFLVKYMTELNDYF 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+IK L RW P K+ H ALDDIRESI EL++Y++++FK
Sbjct: 135 HYRNVDVSTIKELGRRWCPEVVSSF-HKQGLHLALDDIRESIGELQHYRQHMFK 187
>gi|150260590|ref|ZP_01917318.1| oligoribonuclease [Yersinia pestis CA88-4125]
gi|161484882|ref|NP_667960.2| oligoribonuclease [Yersinia pestis KIM10+]
gi|161511446|ref|NP_991914.2| oligoribonuclease [Yersinia pestis biovar Microtus str. 91001]
gi|162419396|ref|YP_001605286.1| oligoribonuclease [Yersinia pestis Angola]
gi|165926762|ref|ZP_02222594.1| oligoribonuclease [Yersinia pestis biovar Orientalis str. F1991016]
gi|165936480|ref|ZP_02225048.1| oligoribonuclease [Yersinia pestis biovar Orientalis str. IP275]
gi|166011882|ref|ZP_02232780.1| oligoribonuclease [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213971|ref|ZP_02240006.1| oligoribonuclease [Yersinia pestis biovar Antiqua str. B42003004]
gi|167400566|ref|ZP_02306075.1| oligoribonuclease [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167418918|ref|ZP_02310671.1| oligoribonuclease [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423542|ref|ZP_02315295.1| oligoribonuclease [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218927569|ref|YP_002345444.1| oligoribonuclease [Yersinia pestis CO92]
gi|229358039|ref|YP_653824.2| oligoribonuclease [Yersinia pestis Antiqua]
gi|229559847|ref|YP_649232.2| oligoribonuclease [Yersinia pestis Nepal516]
gi|229836625|ref|ZP_04456791.1| oligoribonuclease [Yersinia pestis Pestoides A]
gi|229840237|ref|ZP_04460396.1| oligoribonuclease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842315|ref|ZP_04462470.1| oligoribonuclease [Yersinia pestis biovar Orientalis str. India
195]
gi|229903946|ref|ZP_04519059.1| oligoribonuclease [Yersinia pestis Nepal516]
gi|270489066|ref|ZP_06206140.1| exonuclease [Yersinia pestis KIM D27]
gi|294502475|ref|YP_003566537.1| oligoribonuclease [Yersinia pestis Z176003]
gi|384120909|ref|YP_005503529.1| oligoribonuclease [Yersinia pestis D106004]
gi|384124788|ref|YP_005507402.1| oligoribonuclease [Yersinia pestis D182038]
gi|384137653|ref|YP_005520355.1| oligoribonuclease [Yersinia pestis A1122]
gi|384413265|ref|YP_005622627.1| oligoribonuclease [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420544810|ref|ZP_15043001.1| oligoribonuclease [Yersinia pestis PY-01]
gi|420550122|ref|ZP_15047754.1| oligoribonuclease [Yersinia pestis PY-02]
gi|420555570|ref|ZP_15052602.1| oligoribonuclease [Yersinia pestis PY-03]
gi|420561221|ref|ZP_15057518.1| oligoribonuclease [Yersinia pestis PY-04]
gi|420566260|ref|ZP_15062064.1| oligoribonuclease [Yersinia pestis PY-05]
gi|420571881|ref|ZP_15067172.1| oligoribonuclease [Yersinia pestis PY-06]
gi|420577230|ref|ZP_15072006.1| oligoribonuclease [Yersinia pestis PY-07]
gi|420582574|ref|ZP_15076874.1| oligoribonuclease [Yersinia pestis PY-08]
gi|420587713|ref|ZP_15081515.1| oligoribonuclease [Yersinia pestis PY-09]
gi|420593027|ref|ZP_15086296.1| oligoribonuclease [Yersinia pestis PY-10]
gi|420598707|ref|ZP_15091387.1| oligoribonuclease [Yersinia pestis PY-11]
gi|420604241|ref|ZP_15096317.1| oligoribonuclease [Yersinia pestis PY-12]
gi|420609573|ref|ZP_15101160.1| oligoribonuclease [Yersinia pestis PY-13]
gi|420614838|ref|ZP_15105852.1| exonuclease family protein [Yersinia pestis PY-14]
gi|420620283|ref|ZP_15110599.1| oligoribonuclease [Yersinia pestis PY-15]
gi|420625335|ref|ZP_15115179.1| oligoribonuclease [Yersinia pestis PY-16]
gi|420630492|ref|ZP_15119860.1| oligoribonuclease [Yersinia pestis PY-19]
gi|420635621|ref|ZP_15124446.1| oligoribonuclease [Yersinia pestis PY-25]
gi|420641218|ref|ZP_15129490.1| oligoribonuclease [Yersinia pestis PY-29]
gi|420646379|ref|ZP_15134225.1| oligoribonuclease [Yersinia pestis PY-32]
gi|420652027|ref|ZP_15139287.1| oligoribonuclease [Yersinia pestis PY-34]
gi|420657471|ref|ZP_15144200.1| oligoribonuclease [Yersinia pestis PY-36]
gi|420662803|ref|ZP_15148956.1| oligoribonuclease [Yersinia pestis PY-42]
gi|420667794|ref|ZP_15153470.1| exonuclease family protein [Yersinia pestis PY-45]
gi|420673104|ref|ZP_15158300.1| oligoribonuclease [Yersinia pestis PY-46]
gi|420678607|ref|ZP_15163309.1| oligoribonuclease [Yersinia pestis PY-47]
gi|420683838|ref|ZP_15168010.1| oligoribonuclease [Yersinia pestis PY-48]
gi|420688996|ref|ZP_15172594.1| oligoribonuclease [Yersinia pestis PY-52]
gi|420694820|ref|ZP_15177686.1| oligoribonuclease [Yersinia pestis PY-53]
gi|420700082|ref|ZP_15182287.1| exonuclease family protein [Yersinia pestis PY-54]
gi|420706233|ref|ZP_15187158.1| oligoribonuclease [Yersinia pestis PY-55]
gi|420711524|ref|ZP_15191960.1| oligoribonuclease [Yersinia pestis PY-56]
gi|420716894|ref|ZP_15196717.1| oligoribonuclease [Yersinia pestis PY-58]
gi|420722538|ref|ZP_15201523.1| oligoribonuclease [Yersinia pestis PY-59]
gi|420728177|ref|ZP_15206534.1| oligoribonuclease [Yersinia pestis PY-60]
gi|420733273|ref|ZP_15211125.1| oligoribonuclease [Yersinia pestis PY-61]
gi|420738740|ref|ZP_15216063.1| oligoribonuclease [Yersinia pestis PY-63]
gi|420743987|ref|ZP_15220759.1| oligoribonuclease [Yersinia pestis PY-64]
gi|420749856|ref|ZP_15225688.1| oligoribonuclease [Yersinia pestis PY-65]
gi|420754928|ref|ZP_15230228.1| oligoribonuclease [Yersinia pestis PY-66]
gi|420761031|ref|ZP_15235078.1| oligoribonuclease [Yersinia pestis PY-71]
gi|420766203|ref|ZP_15239760.1| oligoribonuclease [Yersinia pestis PY-72]
gi|420771248|ref|ZP_15244274.1| oligoribonuclease [Yersinia pestis PY-76]
gi|420776540|ref|ZP_15249050.1| oligoribonuclease [Yersinia pestis PY-88]
gi|420782047|ref|ZP_15253883.1| oligoribonuclease [Yersinia pestis PY-89]
gi|420787491|ref|ZP_15258653.1| exonuclease family protein [Yersinia pestis PY-90]
gi|420792938|ref|ZP_15263562.1| oligoribonuclease [Yersinia pestis PY-91]
gi|420798110|ref|ZP_15268206.1| oligoribonuclease [Yersinia pestis PY-92]
gi|420803456|ref|ZP_15273019.1| oligoribonuclease [Yersinia pestis PY-93]
gi|420808638|ref|ZP_15277711.1| exonuclease family protein [Yersinia pestis PY-94]
gi|420814424|ref|ZP_15282887.1| oligoribonuclease [Yersinia pestis PY-95]
gi|420819560|ref|ZP_15287550.1| oligoribonuclease [Yersinia pestis PY-96]
gi|420824649|ref|ZP_15292098.1| oligoribonuclease [Yersinia pestis PY-98]
gi|420830461|ref|ZP_15297347.1| oligoribonuclease [Yersinia pestis PY-99]
gi|420835292|ref|ZP_15301698.1| oligoribonuclease [Yersinia pestis PY-100]
gi|420840414|ref|ZP_15306340.1| oligoribonuclease [Yersinia pestis PY-101]
gi|420846025|ref|ZP_15311421.1| oligoribonuclease [Yersinia pestis PY-102]
gi|420851365|ref|ZP_15316188.1| oligoribonuclease [Yersinia pestis PY-103]
gi|420856959|ref|ZP_15320896.1| oligoribonuclease [Yersinia pestis PY-113]
gi|421761793|ref|ZP_16198593.1| oligoribonuclease [Yersinia pestis INS]
gi|20138838|sp|Q8ZIW9.1|ORN_YERPE RecName: Full=Oligoribonuclease
gi|115346180|emb|CAL19048.1| oligoribonuclease [Yersinia pestis CO92]
gi|149289998|gb|EDM40075.1| oligoribonuclease [Yersinia pestis CA88-4125]
gi|162352211|gb|ABX86159.1| oligoribonuclease [Yersinia pestis Angola]
gi|165915596|gb|EDR34205.1| oligoribonuclease [Yersinia pestis biovar Orientalis str. IP275]
gi|165921385|gb|EDR38609.1| oligoribonuclease [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989241|gb|EDR41542.1| oligoribonuclease [Yersinia pestis biovar Antiqua str. E1979001]
gi|166204766|gb|EDR49246.1| oligoribonuclease [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962912|gb|EDR58933.1| oligoribonuclease [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049934|gb|EDR61342.1| oligoribonuclease [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057712|gb|EDR67458.1| oligoribonuclease [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229679716|gb|EEO75819.1| oligoribonuclease [Yersinia pestis Nepal516]
gi|229690625|gb|EEO82679.1| oligoribonuclease [Yersinia pestis biovar Orientalis str. India
195]
gi|229696603|gb|EEO86650.1| oligoribonuclease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229706309|gb|EEO92317.1| oligoribonuclease [Yersinia pestis Pestoides A]
gi|262360505|gb|ACY57226.1| oligoribonuclease [Yersinia pestis D106004]
gi|262364452|gb|ACY61009.1| oligoribonuclease [Yersinia pestis D182038]
gi|270337570|gb|EFA48347.1| exonuclease [Yersinia pestis KIM D27]
gi|294352934|gb|ADE63275.1| oligoribonuclease [Yersinia pestis Z176003]
gi|320013769|gb|ADV97340.1| oligoribonuclease [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342852782|gb|AEL71335.1| oligoribonuclease [Yersinia pestis A1122]
gi|391432657|gb|EIQ94074.1| oligoribonuclease [Yersinia pestis PY-01]
gi|391433722|gb|EIQ95012.1| oligoribonuclease [Yersinia pestis PY-02]
gi|391436389|gb|EIQ97348.1| oligoribonuclease [Yersinia pestis PY-03]
gi|391448628|gb|EIR08423.1| oligoribonuclease [Yersinia pestis PY-04]
gi|391449396|gb|EIR09124.1| oligoribonuclease [Yersinia pestis PY-05]
gi|391451773|gb|EIR11239.1| oligoribonuclease [Yersinia pestis PY-06]
gi|391464716|gb|EIR22973.1| oligoribonuclease [Yersinia pestis PY-07]
gi|391466322|gb|EIR24406.1| oligoribonuclease [Yersinia pestis PY-08]
gi|391468376|gb|EIR26258.1| oligoribonuclease [Yersinia pestis PY-09]
gi|391481849|gb|EIR38344.1| oligoribonuclease [Yersinia pestis PY-10]
gi|391482756|gb|EIR39179.1| oligoribonuclease [Yersinia pestis PY-12]
gi|391482966|gb|EIR39368.1| oligoribonuclease [Yersinia pestis PY-11]
gi|391496977|gb|EIR51879.1| oligoribonuclease [Yersinia pestis PY-13]
gi|391497741|gb|EIR52570.1| oligoribonuclease [Yersinia pestis PY-15]
gi|391501351|gb|EIR55766.1| exonuclease family protein [Yersinia pestis PY-14]
gi|391512619|gb|EIR65918.1| oligoribonuclease [Yersinia pestis PY-16]
gi|391514216|gb|EIR67348.1| oligoribonuclease [Yersinia pestis PY-19]
gi|391516046|gb|EIR68977.1| oligoribonuclease [Yersinia pestis PY-25]
gi|391528192|gb|EIR80036.1| oligoribonuclease [Yersinia pestis PY-29]
gi|391531019|gb|EIR82551.1| oligoribonuclease [Yersinia pestis PY-34]
gi|391532293|gb|EIR83703.1| oligoribonuclease [Yersinia pestis PY-32]
gi|391545196|gb|EIR95315.1| oligoribonuclease [Yersinia pestis PY-36]
gi|391546882|gb|EIR96832.1| oligoribonuclease [Yersinia pestis PY-42]
gi|391547717|gb|EIR97587.1| exonuclease family protein [Yersinia pestis PY-45]
gi|391561373|gb|EIS09911.1| oligoribonuclease [Yersinia pestis PY-46]
gi|391562487|gb|EIS10892.1| oligoribonuclease [Yersinia pestis PY-47]
gi|391564644|gb|EIS12833.1| oligoribonuclease [Yersinia pestis PY-48]
gi|391576723|gb|EIS23238.1| oligoribonuclease [Yersinia pestis PY-52]
gi|391577514|gb|EIS23926.1| oligoribonuclease [Yersinia pestis PY-53]
gi|391588815|gb|EIS33789.1| oligoribonuclease [Yersinia pestis PY-55]
gi|391591980|gb|EIS36481.1| exonuclease family protein [Yersinia pestis PY-54]
gi|391592756|gb|EIS37140.1| oligoribonuclease [Yersinia pestis PY-56]
gi|391605747|gb|EIS48581.1| oligoribonuclease [Yersinia pestis PY-60]
gi|391607495|gb|EIS50091.1| oligoribonuclease [Yersinia pestis PY-58]
gi|391608140|gb|EIS50664.1| oligoribonuclease [Yersinia pestis PY-59]
gi|391620257|gb|EIS61430.1| oligoribonuclease [Yersinia pestis PY-61]
gi|391621181|gb|EIS62258.1| oligoribonuclease [Yersinia pestis PY-63]
gi|391629576|gb|EIS69484.1| oligoribonuclease [Yersinia pestis PY-64]
gi|391631738|gb|EIS71337.1| oligoribonuclease [Yersinia pestis PY-65]
gi|391642971|gb|EIS81184.1| oligoribonuclease [Yersinia pestis PY-71]
gi|391645769|gb|EIS83612.1| oligoribonuclease [Yersinia pestis PY-72]
gi|391648793|gb|EIS86266.1| oligoribonuclease [Yersinia pestis PY-66]
gi|391655493|gb|EIS92229.1| oligoribonuclease [Yersinia pestis PY-76]
gi|391662392|gb|EIS98328.1| oligoribonuclease [Yersinia pestis PY-88]
gi|391667386|gb|EIT02726.1| oligoribonuclease [Yersinia pestis PY-89]
gi|391669069|gb|EIT04244.1| exonuclease family protein [Yersinia pestis PY-90]
gi|391672912|gb|EIT07682.1| oligoribonuclease [Yersinia pestis PY-91]
gi|391686720|gb|EIT20111.1| oligoribonuclease [Yersinia pestis PY-93]
gi|391688205|gb|EIT21441.1| oligoribonuclease [Yersinia pestis PY-92]
gi|391689499|gb|EIT22622.1| exonuclease family protein [Yersinia pestis PY-94]
gi|391700892|gb|EIT32946.1| oligoribonuclease [Yersinia pestis PY-95]
gi|391704024|gb|EIT35715.1| oligoribonuclease [Yersinia pestis PY-96]
gi|391704812|gb|EIT36437.1| oligoribonuclease [Yersinia pestis PY-98]
gi|391715437|gb|EIT45989.1| oligoribonuclease [Yersinia pestis PY-99]
gi|391720342|gb|EIT50374.1| oligoribonuclease [Yersinia pestis PY-100]
gi|391720942|gb|EIT50928.1| oligoribonuclease [Yersinia pestis PY-101]
gi|391731480|gb|EIT60181.1| oligoribonuclease [Yersinia pestis PY-102]
gi|391733999|gb|EIT62311.1| oligoribonuclease [Yersinia pestis PY-103]
gi|391737357|gb|EIT65252.1| oligoribonuclease [Yersinia pestis PY-113]
gi|411178115|gb|EKS48127.1| oligoribonuclease [Yersinia pestis INS]
Length = 181
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R+AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ VDVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYVDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>gi|425743249|ref|ZP_18861338.1| oligoribonuclease [Acinetobacter baumannii WC-323]
gi|425494525|gb|EKU60725.1| oligoribonuclease [Acinetobacter baumannii WC-323]
Length = 196
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 116/198 (58%), Gaps = 6/198 (3%)
Query: 52 TLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVI 111
TLE S TP L+WIDLEMTGL + D+I+EIA IITD L EGP L +
Sbjct: 5 TLELPSMSSTP-----DTRLIWIDLEMTGLDTDNDKIIEIATIITDDHLNILAEGPVLAV 59
Query: 112 HQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNS 171
HQ+ L++M EW H SGL ++V S LT ++AE+Q +EF+KK V + + GNS
Sbjct: 60 HQSDLILNAMDEWNTKQHGQSGLIERVRRSKLTAQDAEQQTLEFLKKWVNPKSSPMCGNS 119
Query: 172 VYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRES 231
+ D FL + MP+L F + +DVSS+K L RW P + K H A+DDIR+S
Sbjct: 120 ICQDRRFLHRLMPELEQFFHYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDS 178
Query: 232 IMELKYYKENIFKTNLKK 249
I ELKYY+E F N K
Sbjct: 179 IAELKYYREYFFIMNHDK 196
>gi|422007133|ref|ZP_16354119.1| oligoribonuclease [Providencia rettgeri Dmel1]
gi|414097023|gb|EKT58678.1| oligoribonuclease [Providencia rettgeri Dmel1]
Length = 181
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA I+TD L EGP + +HQT E L M EW N H
Sbjct: 8 LIWIDLEMTGLDPVRDRIIEIATIVTDSHLNILAEGPVIAVHQTNEQLALMDEWNVNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++EREAE +EF++K V + GNSV D FL YMP+L F
Sbjct: 68 NSGLVERVRKSTVSEREAELATIEFLEKWVPQGVSPICGNSVGQDRRFLFNYMPELERYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D SK+ H+ALDDIRES+ EL YY+E K
Sbjct: 128 HYRYLDVSTLKELARRWKP-DILAGFSKKNTHQALDDIRESVAELAYYRETFIK 180
>gi|262273022|ref|ZP_06050841.1| oligoribonuclease [Grimontia hollisae CIP 101886]
gi|262222932|gb|EEY74238.1| oligoribonuclease [Grimontia hollisae CIP 101886]
Length = 181
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL EV +++EIA I+TD +L EGP L IHQ+ E L M EWC H
Sbjct: 8 LIWIDLEMTGLDPEVHKVIEIATIVTDAELKVLAEGPVLAIHQSDEELAKMDEWCTKTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + E +A K+ + F+++ V + GNSV D FL K+MPDL F
Sbjct: 68 RSGLVERVKESTINEAQAVKETIAFLQEWVPAGVSPICGNSVGQDRRFLYKHMPDLERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS+IK L RW P D K+ H ALDDIRESI EL+YY+ IF
Sbjct: 128 HYRTVDVSTIKELVRRWQP-DVLSGFKKQGAHLALDDIRESIEELRYYRSKIF 179
>gi|404214537|ref|YP_006668732.1| Oligoribonuclease (3'->5' exoribonuclease) [Gordonia sp. KTR9]
gi|403645336|gb|AFR48576.1| Oligoribonuclease (3'->5' exoribonuclease) [Gordonia sp. KTR9]
Length = 194
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
Query: 72 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEA 131
+WID EMTGL++E D+++EIA ++TD L +G D+VIH L SM + H A
Sbjct: 1 MWIDCEMTGLRLESDKLIEIAALVTDSDLNILGDGVDVVIHADDAALASMPDVVTKMHAA 60
Query: 132 SGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +T EAEK V+++++++V T + LAGNS+ D F+ + MP+L +
Sbjct: 61 SGLTEEVRASTVTLAEAEKLVLDYIREHVTTAGAVPLAGNSIATDRGFITRDMPELDAYL 120
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYP+ Y P K HRAL DIRESI EL+YY+ F
Sbjct: 121 HYRMVDVSSIKELCRRWYPKVYFGQPEKGLAHRALADIRESIRELRYYRAAAF 173
>gi|51594770|ref|YP_068961.1| oligoribonuclease [Yersinia pseudotuberculosis IP 32953]
gi|153949964|ref|YP_001402615.1| oligoribonuclease [Yersinia pseudotuberculosis IP 31758]
gi|229597226|ref|YP_001722527.2| oligoribonuclease [Yersinia pseudotuberculosis YPIII]
gi|229597243|ref|YP_001870889.2| oligoribonuclease [Yersinia pseudotuberculosis PB1/+]
gi|59798016|sp|Q66FC2.1|ORN_YERPS RecName: Full=Oligoribonuclease
gi|166918641|sp|A7FMY7.1|ORN_YERP3 RecName: Full=Oligoribonuclease
gi|51588052|emb|CAH19658.1| possible oligoribonuclease [Yersinia pseudotuberculosis IP 32953]
gi|152961459|gb|ABS48920.1| oligoribonuclease [Yersinia pseudotuberculosis IP 31758]
Length = 181
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R+AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKTSPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ VDVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYVDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>gi|331698794|ref|YP_004335033.1| oligoribonuclease [Pseudonocardia dioxanivorans CB1190]
gi|326953483|gb|AEA27180.1| Oligoribonuclease [Pseudonocardia dioxanivorans CB1190]
Length = 204
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ D ++EIA ++TDG L EG D+VIH + L +M + ++ H
Sbjct: 5 LVWIDCEMTGLDLQRDALIEIAVLVTDGDLNVLGEGVDVVIHADESALAAMPDVVRDMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T +EAE+ V+ +V+++V + LAGNS+ D FL + MP+L +
Sbjct: 65 RSGLTEEVRRSTVTLQEAEQAVLAYVREHVPDPVSAPLAGNSIATDRGFLARDMPELDAH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RW+PR + P K HRAL DIRESI EL YY+ +F
Sbjct: 125 LHYRMVDVSSIKELCRRWFPRVFYAKPEKGLAHRALADIRESIRELAYYRATLF 178
>gi|152996651|ref|YP_001341486.1| oligoribonuclease [Marinomonas sp. MWYL1]
gi|150837575|gb|ABR71551.1| Exonuclease RNase T and DNA polymerase III [Marinomonas sp. MWYL1]
Length = 185
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E D I+EIA ++TD L +GP L IHQ K +D+M EWC HH
Sbjct: 8 LVWIDLEMTGLDPETDTIIEIATVVTDKHLNVLAKGPSLAIHQEKAVMDAMDEWCTQHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +VL S ++ +AE++ ++F+ + V + GNSV D FL +YMP L F
Sbjct: 68 DSGLTARVLSSTISMEQAEEETIKFLAQYVPAGKSPICGNSVGQDRRFLYRYMPKLEVFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SK H A+DDI ESI ELK+Y++ +F
Sbjct: 128 HYRYLDVSTVKELAKRWKPEALEGF-SKSGSHLAMDDILESIGELKHYRKTMF 179
>gi|254509115|ref|ZP_05121216.1| oligoribonuclease [Vibrio parahaemolyticus 16]
gi|219547953|gb|EED24977.1| oligoribonuclease [Vibrio parahaemolyticus 16]
Length = 181
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ + L+ M EWC H
Sbjct: 8 LIWMDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPESELEKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +TE++A +Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 GSGLVARVRASQVTEQDAIRQTIEFLEKWVPKGKSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK H ALDDIRESI ELKYY++ IF
Sbjct: 128 HYRYVDVSTLKELTRRWKPEVLDGF-SKSGSHLALDDIRESIAELKYYRQTIF 179
>gi|212710150|ref|ZP_03318278.1| hypothetical protein PROVALCAL_01204 [Providencia alcalifaciens DSM
30120]
gi|422019098|ref|ZP_16365648.1| oligoribonuclease [Providencia alcalifaciens Dmel2]
gi|212687149|gb|EEB46677.1| hypothetical protein PROVALCAL_01204 [Providencia alcalifaciens DSM
30120]
gi|414103640|gb|EKT65214.1| oligoribonuclease [Providencia alcalifaciens Dmel2]
Length = 180
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA I+TD L EGP + +HQT+E L M EW N H
Sbjct: 8 LIWIDLEMTGLDPIRDRIIEIATIVTDSNLNILAEGPVIAVHQTEEQLALMDEWNVNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +++ S ++EREAE +EF++K V + GNSV D FL YMP+L S F
Sbjct: 68 NSGLVERIRKSVISEREAELATIEFLEKWVPKGVSPICGNSVGQDRRFLFNYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H+ALDDIRESI EL YY+E K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-SKKNTHQALDDIRESIAELVYYRETFIK 180
>gi|389703148|ref|ZP_10185442.1| oligoribonuclease [Acinetobacter sp. HA]
gi|388611551|gb|EIM40651.1| oligoribonuclease [Acinetobacter sp. HA]
Length = 184
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+E+A I+TD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEVATIVTDDNLNILAEGPVLAVHQSDRVLNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V + GNS+ D FL + MP+L F
Sbjct: 69 QSGLVERVRRSKLTAQDAEQQTIEFLKKWVNPKVSPMCGNSICQDRRFLHRLMPELEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIMN 183
>gi|84386967|ref|ZP_00989991.1| oligoribonuclease [Vibrio splendidus 12B01]
gi|84378257|gb|EAP95116.1| oligoribonuclease [Vibrio splendidus 12B01]
Length = 181
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ + LD M EWC H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPQSELDKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K++ S ++E+EA +Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 GSGLVKRIQESTVSEQEAIQQTIEFLEKWVPKGKSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK H ALDDIRESI EL+YY++ I
Sbjct: 128 HYRYVDVSTLKELTRRWKPEVLDGF-SKSGSHLALDDIRESIAELQYYRKTII 179
>gi|295098321|emb|CBK87411.1| Oligoribonuclease (3'->5' exoribonuclease) [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 181
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ + L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L +REAE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVERVKASSLGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|333918708|ref|YP_004492289.1| putative oligoribonuclease [Amycolicicoccus subflavus DQS3-9A1]
gi|333480929|gb|AEF39489.1| putative oligoribonuclease [Amycolicicoccus subflavus DQS3-9A1]
Length = 212
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD L EG D+VIH LD+M H
Sbjct: 5 LVWIDCEMTGLDLSKDKLVEIAALVTDADLNILGEGIDVVIHADDADLDAMQPVVAEMHR 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V +S +T EA++ V+++++K+V T T LAGNS+ D FL + MP L
Sbjct: 65 RSGLTEEVRNSAVTIDEAQELVLDYIRKHVPTPSTAPLAGNSIATDRGFLSRDMPKLDEH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DIRESI ELK+Y+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYYGQPDKGLAHRALADIRESIRELKFYRRTAF 178
>gi|227503021|ref|ZP_03933070.1| oligoribonuclease [Corynebacterium accolens ATCC 49725]
gi|227076082|gb|EEI14045.1| oligoribonuclease [Corynebacterium accolens ATCC 49725]
Length = 213
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E I+E+A +ITDG L +G DLV+H T+E L M + H
Sbjct: 16 LVWIDLEMTGLDPERHVIVEVAAVITDGNLNILGKGIDLVVHATEEELSQMDSFVTEMHA 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K++ S T REAE V+ + ++ PL AGNS+ D F++ YMP L
Sbjct: 76 NSGLDKEIRQSATTIREAEDAVLALINEHCEHPAPL-AGNSIATDRTFIRAYMPRLDEAL 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RW+PR Y P K HRAL DI ESI EL +Y+ ++F+T+
Sbjct: 135 HYRMIDVSTIKELARRWHPRAYYNQPDKGMAHRALQDIIESIRELDFYRRSVFRTD 190
>gi|350544108|ref|ZP_08913761.1| 3'-to-5' oligoribonuclease (orn) [Candidatus Burkholderia kirkii
UZHbot1]
gi|350528106|emb|CCD36488.1| 3'-to-5' oligoribonuclease (orn) [Candidatus Burkholderia kirkii
UZHbot1]
Length = 246
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 127/225 (56%), Gaps = 16/225 (7%)
Query: 23 PAAASSSSS----SSSSCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEM 78
PA AS S SS + E + +NS+ TL M LVW+D+EM
Sbjct: 24 PAIASIVSRRGFLSSQAAFMTELSAASNSAEETTL-----------VRSDMNLVWLDMEM 72
Query: 79 TGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKV 138
TGL + DRI+EIA ++T+ L + VEGP L IHQ+ E L M EW +N H SGLT++V
Sbjct: 73 TGLDPDNDRIIEIAVVVTNSTLNRMVEGPVLAIHQSDETLVRMDEWNRNTHGRSGLTERV 132
Query: 139 LHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVS 198
S + E EA +Q+ +F+ + V + GNS+ D F+ ++MP+L + F + +DVS
Sbjct: 133 KASTVNEAEATRQIRDFLGQYVPPGKSPMCGNSICQDRRFMARWMPELETFFHYRNLDVS 192
Query: 199 SIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
++K LC RW P Y+ K H AL DI ESI ELKYY+++
Sbjct: 193 TLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYRQHFL 236
>gi|337291398|ref|YP_004630419.1| hypothetical protein CULC22_01790 [Corynebacterium ulcerans
BR-AD22]
gi|384516244|ref|YP_005711336.1| hypothetical protein CULC809_01710 [Corynebacterium ulcerans 809]
gi|397654600|ref|YP_006495283.1| hypothetical protein CULC0102_1850 [Corynebacterium ulcerans 0102]
gi|334697445|gb|AEG82242.1| hypothetical protein CULC809_01710 [Corynebacterium ulcerans 809]
gi|334699704|gb|AEG84500.1| hypothetical protein CULC22_01790 [Corynebacterium ulcerans
BR-AD22]
gi|393403556|dbj|BAM28048.1| hypothetical protein CULC0102_1850 [Corynebacterium ulcerans 0102]
Length = 219
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 116/197 (58%), Gaps = 6/197 (3%)
Query: 52 TLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVI 111
TLEN S TP + + LVWIDLEMTGL I+E+A +ITD L EG DLV+
Sbjct: 7 TLENM--SDTPAKNDR---LVWIDLEMTGLDTHRHVIVEVAALITDADLNILGEGVDLVV 61
Query: 112 HQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGN 170
H T L M ++ HE SGLT+++ S ++ +EAE V+E + K+ P LAGN
Sbjct: 62 HATDAELAEMDDYVTTMHENSGLTQEIRSSTVSIKEAEDAVLELIAKHCDPQHPAPLAGN 121
Query: 171 SVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRE 230
S+ D F+ YMP L + +VDVSSIK L RW PR Y P K HRAL DI E
Sbjct: 122 SIATDRSFINAYMPRLDEALHYRMVDVSSIKELARRWSPRVYFNQPQKGMAHRALADIVE 181
Query: 231 SIMELKYYKENIFKTNL 247
SI EL+YY++ +FK +L
Sbjct: 182 SIRELEYYRQALFKKDL 198
>gi|307204783|gb|EFN83341.1| Oligoribonuclease, mitochondrial [Harpegnathos saltator]
Length = 168
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 114/166 (68%)
Query: 78 MTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKK 137
MTGL +E + ILEIAC+ITD L + +L+I+Q E L++M +WC+ H+ SGL
Sbjct: 1 MTGLDVENNHILEIACLITDENLISVDDYLNLIIYQPNEILENMTDWCKVQHKKSGLITA 60
Query: 138 VLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDV 197
S +T +EAE+ +++++KK++ LAGNS++ D+MFL+KYMP + + ++DV
Sbjct: 61 CQSSKITLKEAEEIMLKYLKKHISYKVCPLAGNSIHTDYMFLRKYMPLVNDYLHYRIIDV 120
Query: 198 SSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
S+I+ L RW+P Y+ P KE HRA+DDI++SI EL+YY++++F
Sbjct: 121 STIRELTRRWHPNMYKAAPKKEYNHRAVDDIKDSIDELRYYRQHMF 166
>gi|422021062|ref|ZP_16367576.1| oligoribonuclease [Providencia sneebia DSM 19967]
gi|414099967|gb|EKT61600.1| oligoribonuclease [Providencia sneebia DSM 19967]
Length = 182
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+EIA I+TD +L +GP + +HQT E L M EW N H
Sbjct: 8 LIWIDLEMTGLDPDRDRIIEIATIVTDSQLNILAQGPVIAVHQTPEQLALMDEWNVNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S E +AE+ +EF+++ V + GNSV D FL +YMP+L F
Sbjct: 68 ASGLVERVKNSAFAECDAEQATIEFLEQWVPKGASPICGNSVGQDRRFLFRYMPELEKYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P +K+ H+ALDDIRESI EL YY+E K +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQALDDIRESIAELAYYRETFIKAD 182
>gi|229780998|ref|YP_001103540.2| oligoribonuclease [Saccharopolyspora erythraea NRRL 2338]
gi|291007403|ref|ZP_06565376.1| oligoribonuclease [Saccharopolyspora erythraea NRRL 2338]
Length = 221
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 111/175 (63%), Gaps = 3/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD L EG D+VIH E L M + + HE
Sbjct: 5 LVWIDCEMTGLDLGKDALIEIAALVTDADLNILGEGVDIVIHADDEVLAGMPDVVREMHE 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT++V S +T EAE++++++++++V G P LAGNS+ D F+ + MP L +
Sbjct: 65 RSGLTEEVRRSTVTLAEAEQRILDYIRRHVPDGRSAP-LAGNSIATDRGFIARDMPTLDA 123
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RW+PR Y P K HRAL DI+ESI EL YY+ F
Sbjct: 124 HLHYRMVDVSSIKELCRRWFPRIYYAQPEKGLAHRALADIKESIRELAYYRRTAF 178
>gi|336119362|ref|YP_004574139.1| oligoribonuclease [Microlunatus phosphovorus NM-1]
gi|334687151|dbj|BAK36736.1| oligoribonuclease [Microlunatus phosphovorus NM-1]
Length = 218
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 115/175 (65%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TDG+L EG D+VI + E L MG++ +N H+
Sbjct: 5 LVWIDCEMTGLDLINDALIEVAAVVTDGELNVLGEGVDVVIKPSDEALTQMGDFVRNMHQ 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL + +L GL+ + AE+ V+++++ +V G PL AGN++ D FL + MP L S
Sbjct: 65 TSGLLE-LLADGLSMQHAEELVLDYIRAHVPDGRKAPL-AGNTIGTDRAFLARDMPTLES 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSSIK L RWYPR Y P+K HRAL DIRESI EL+YY+E +F
Sbjct: 123 HVHYRNVDVSSIKELARRWYPRVYFHSPAKSGNHRALADIRESIEELRYYREALF 177
>gi|334123785|ref|ZP_08497803.1| oligoribonuclease [Enterobacter hormaechei ATCC 49162]
gi|419956484|ref|ZP_14472552.1| oligoribonuclease [Enterobacter cloacae subsp. cloacae GS1]
gi|333390110|gb|EGK61259.1| oligoribonuclease [Enterobacter hormaechei ATCC 49162]
gi|388608586|gb|EIM37788.1| oligoribonuclease [Enterobacter cloacae subsp. cloacae GS1]
Length = 181
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ + L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L +REAE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVERVKASTLGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|158317263|ref|YP_001509771.1| oligoribonuclease [Frankia sp. EAN1pec]
gi|158112668|gb|ABW14865.1| Exonuclease RNase T and DNA polymerase III [Frankia sp. EAN1pec]
Length = 210
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D +LE+AC++TD +LT EG DLV+ LD M + HE
Sbjct: 16 LVWIDCEMTGLDAGSDLLLEVACLVTDSELTVLDEGIDLVLAAPDAALDQMLPVVREMHE 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT+ V S L EAE+Q++ ++++ V PL GNS+ D F+ +Y+P L +
Sbjct: 76 TSGLTEAVRGSDLKLDEAEEQLLSYIRRFVPEARKAPL-CGNSIATDRTFIARYLPQLDT 134
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 135 FLHYRMIDVSSIKELARRWYPRAYYAAPVKSGGHRALADIRESIEELRYYREILF 189
>gi|261345223|ref|ZP_05972867.1| oligoribonuclease [Providencia rustigianii DSM 4541]
gi|282566919|gb|EFB72454.1| oligoribonuclease [Providencia rustigianii DSM 4541]
Length = 180
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA I+TD L EGP + +HQT+E L M EW N H
Sbjct: 8 LIWIDLEMTGLDPVRDRIIEIATIVTDSNLNILAEGPVIAVHQTEEQLALMDEWNVNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++ S + EREAE +EF++K V + GNSV D FL YMP+L S F
Sbjct: 68 GSGLVDRIRKSTINEREAELATIEFLEKWVPKGASPICGNSVGQDRRFLFNYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+ALDDIRESI EL YY+E K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKKGTHQALDDIRESIAELVYYRETFIK 180
>gi|119776164|ref|YP_928904.1| oligoribonuclease [Shewanella amazonensis SB2B]
gi|166216584|sp|A1SA28.1|ORN_SHEAM RecName: Full=Oligoribonuclease
gi|119768664|gb|ABM01235.1| oligoribonuclease [Shewanella amazonensis SB2B]
Length = 181
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ EVDRILEIA ++TD L +GP + IHQ+ E L +M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPEVDRILEIATLVTDQDLNILAQGPVIAIHQSDEVLAAMDDWNQQHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S TE +A Q ++F+ +V + GNSV D FL KYM +L F
Sbjct: 68 ASGLIERVRSSQYTEADAIAQTIDFLSLHVPKGVSPMCGNSVGQDRRFLNKYMRELEDFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P + K K+ H+AL DI+ESI EL++Y++ +FK
Sbjct: 128 HYRNIDVSTIKELVKRWDP-EVMKGFKKQGTHQALLDIQESIAELQFYRDKVFK 180
>gi|385789360|ref|YP_005820483.1| oligoribonuclease [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326392|gb|ADL25593.1| oligoribonuclease [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 185
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 112/184 (60%), Gaps = 11/184 (5%)
Query: 68 KMP-----LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMG 122
+MP LVW+DLEM+GL E D ILEIA I+TD L EGP + IHQ++ +SM
Sbjct: 6 RMPKSSRNLVWMDLEMSGLYPEKDVILEIATIVTDANLNILAEGPVIAIHQSENVFESMD 65
Query: 123 EWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKY 182
EW HH SGL + S + ++AE + + F+K LL GNS+ D FL KY
Sbjct: 66 EWNTRHHNQSGLVDRCRRSQYSLKDAELETLRFIKPFTEKGKNLLCGNSITQDRRFLYKY 125
Query: 183 MPDLASLFSHVLVDVSSIKALCMRWYP--RDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
MP+++ + +DVSSIK L RWYP D++ KE++H AL+DIRESI EL YY++
Sbjct: 126 MPEISEWLCYRNIDVSSIKELSYRWYPNLEDFQ----KEKRHEALNDIRESIAELAYYRK 181
Query: 241 NIFK 244
IFK
Sbjct: 182 TIFK 185
>gi|336125368|ref|YP_004567416.1| Oligoribonuclease [Vibrio anguillarum 775]
gi|365539370|ref|ZP_09364545.1| oligoribonuclease [Vibrio ordalii ATCC 33509]
gi|335343091|gb|AEH34374.1| Oligoribonuclease [Vibrio anguillarum 775]
Length = 181
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ++ L M EWC H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAVHQSEAELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V H +T++EA +Q + F++K V + GNS+ D FL K+MP+L + F
Sbjct: 68 KSGLVERVRHDSVTQQEAVEQTITFLEKWVPKGKSPICGNSIGQDRRFLYKHMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK+ H ALDDIRESI EL+YY++ IF
Sbjct: 128 HYRYVDVSTLKELTRRWKPEVLDGF-SKQGSHLALDDIRESIAELQYYRKTIF 179
>gi|261417450|ref|YP_003251133.1| Exonuclease RNase T and DNA polymerase III [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373906|gb|ACX76651.1| Exonuclease RNase T and DNA polymerase III [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 179
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 109/176 (61%), Gaps = 6/176 (3%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEM+GL E D ILEIA I+TD L EGP + IHQ++ +SM EW HH
Sbjct: 8 LVWMDLEMSGLYPEKDVILEIATIVTDANLNILAEGPVIAIHQSENVFESMDEWNTRHHN 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S + ++AE + + F+K LL GNS+ D FL KYMP+++
Sbjct: 68 QSGLVDRCRRSQYSLKDAELETLRFIKPFTEKGKNLLCGNSITQDRRFLYKYMPEISEWL 127
Query: 191 SHVLVDVSSIKALCMRWYP--RDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSSIK L RWYP D++ KE++H AL+DIRESI EL YY++ IFK
Sbjct: 128 CYRNIDVSSIKELSYRWYPNLEDFQ----KEKRHEALNDIRESIAELAYYRKTIFK 179
>gi|114777190|ref|ZP_01452201.1| oligoribonuclease [Mariprofundus ferrooxydans PV-1]
gi|114552335|gb|EAU54818.1| oligoribonuclease [Mariprofundus ferrooxydans PV-1]
Length = 183
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 118/174 (67%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL+ + D I+EIA IITDG+L EGP++VIHQ E LD+M EW HH
Sbjct: 8 LVWMDLEMTGLEPDHDTIIEIATIITDGELNILAEGPNIVIHQPDEALDAMDEWNTTHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S + AE++ ++F++K V + L GNS++ D FL +YMP L S
Sbjct: 68 ESGLTARVRASRTSMAVAEQKTLDFIRKYVPEGSSPLCGNSIHQDRRFLVRYMPKLESYV 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RWYP D K P K+ +H+AL DIRESI EL +Y+++IF+
Sbjct: 128 HYRNIDVSTIKELAKRWYPDD--KAPIKQAEHQALSDIRESINELIWYRQHIFR 179
>gi|383776141|ref|YP_005460707.1| putative oligoribonuclease [Actinoplanes missouriensis 431]
gi|381369373|dbj|BAL86191.1| putative oligoribonuclease [Actinoplanes missouriensis 431]
Length = 198
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++E+A ++TD +L EG DLVIH LD+M ++ H
Sbjct: 7 LVWIDCEMTGLDLGKDKLIEVAALVTDPELNVLGEGVDLVIHADDAALDAMPPVVRDMHA 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE+ V+ ++K+ V T L GNS+ D FL + MP L +
Sbjct: 67 KSGLTDEVRRSTVTMAEAEEAVLAYIKEFVPNPRTAPLCGNSIATDRGFLARDMPALDAH 126
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P+K HRAL DIRESI EL+YY+ +F
Sbjct: 127 LHYRMIDVSSIKELCRRWYPRVYFGQPAKGLSHRALADIRESIRELEYYRRTVF 180
>gi|344199226|ref|YP_004783552.1| oligoribonuclease [Acidithiobacillus ferrivorans SS3]
gi|343774670|gb|AEM47226.1| Oligoribonuclease [Acidithiobacillus ferrivorans SS3]
Length = 190
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ E D+ILEIA ++TD L EGP L +HQ + L +M +W Q H
Sbjct: 8 LIWIDLEMTGLQPEQDQILEIATLVTDNNLRILCEGPVLAVHQPEFALTAMDDWNQRTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S L E Q ++F+ ++V T + GNSV D FL + MP L F
Sbjct: 68 ASGLLQRVRDSRLDTAAVETQTLDFLHQHVTAGTSPICGNSVCQDRRFLARLMPRLERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS+IK L RWYP K P K ++H AL DIRES+ EL YY+E +F
Sbjct: 128 HYRMMDVSTIKELATRWYPH-LPKFP-KAERHEALADIRESVSELAYYRERLF 178
>gi|90407113|ref|ZP_01215302.1| oligoribonuclease [Psychromonas sp. CNPT3]
gi|90311835|gb|EAS39931.1| oligoribonuclease [Psychromonas sp. CNPT3]
Length = 179
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E D I+EIA I+TD L EGP VIH K+ +D+M EWC HH
Sbjct: 6 LIWIDLEMTGLNPETDLIIEIATIVTDSDLNVLEEGPAFVIHAPKQNMDAMDEWCTTHHG 65
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++VL S ++ +AE+ + F+KK L GNS+ D FL +YMP+L + F
Sbjct: 66 DSGLTQRVLESDISCAQAEQATLAFLKKWTLQGASPLCGNSIGQDRRFLVRYMPELEAYF 125
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSSIK L RW P + K +H AL DIR+SI EL++YK++ F
Sbjct: 126 HYRSIDVSSIKELGRRWAP-EMVNAHKKAGEHLALADIRDSISELQHYKKHFF 177
>gi|406038640|ref|ZP_11045995.1| oligoribonuclease [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 183
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+E+A IITD L EGP L +HQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEVATIITDDHLNILAEGPVLAVHQPDRILNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V + + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLTAQDAEQQTLEFLKKWVSPKSSPMCGNSICQDRRFLHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIKN 183
>gi|350419392|ref|XP_003492165.1| PREDICTED: probable oligoribonuclease-like [Bombus impatiens]
Length = 186
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 112/173 (64%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++WID E+TGL IE D ILE+AC+ITD L E ++VI+Q L++M EWC N H
Sbjct: 9 IIWIDTELTGLDIEKDTILEVACLITDKDLNIISEEFNVVINQPDVVLENMNEWCTNWHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL K S + ++AE+ ++ +K + + + LAGN+VY+D +FL K+MP +
Sbjct: 69 KTGLIAKSKCSKYSLKDAEQMLLNLLKNYIPSKSCPLAGNTVYMDRLFLLKFMPLVNDYL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++D S IK L RW P Y+ +P K++ HRAL DI+ESI ELKYYK NIF
Sbjct: 129 HYRIIDCSVIKELVRRWNPTIYKNMPEKKRCHRALSDIKESINELKYYKTNIF 181
>gi|262374958|ref|ZP_06068192.1| oligoribonuclease [Acinetobacter lwoffii SH145]
gi|262309971|gb|EEY91100.1| oligoribonuclease [Acinetobacter lwoffii SH145]
Length = 185
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA I+TD L EGP L +HQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIVTDDNLNILAEGPVLAVHQPARLLNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V + + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLTAQDAEQQTIEFLKKWVNPKSSPMCGNSICQDRRFLHRLMPELEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY++ F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYRQYFFIMN 183
>gi|227833883|ref|YP_002835590.1| oligoribonuclease [Corynebacterium aurimucosum ATCC 700975]
gi|227454899|gb|ACP33652.1| putative oligoribonuclease [Corynebacterium aurimucosum ATCC
700975]
Length = 210
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + I+E+A ++TD +L EG D+V+H T+E L M ++ H
Sbjct: 11 LVWIDLEMTGLDPKRHVIVEVAAVVTDAELNILDEGIDIVVHATEEELAQMDDFVTEMHA 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGL K++ S +T EAE+ V++ V+K+ P LAGNS+ D F+++YMP L +
Sbjct: 71 KSGLDKEIRESAITIAEAEEAVLKLVEKHCDANHPAPLAGNSIATDRTFIREYMPRLDAA 130
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RW+PR Y P K HRAL DI ESI EL +Y+ ++F+T+
Sbjct: 131 LHYRMIDVSTIKELARRWHPRAYYNQPDKGMAHRALQDIIESIRELDFYRRSVFRTD 187
>gi|296392793|ref|YP_003657677.1| exonuclease RNase T and DNA polymerase III [Segniliparus rotundus
DSM 44985]
gi|296179940|gb|ADG96846.1| Exonuclease RNase T and DNA polymerase III [Segniliparus rotundus
DSM 44985]
Length = 202
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D EMTGL+ D+++EIA ++TDG+L +G DLVIH ++ L M E+ N H
Sbjct: 8 LLWVDCEMTGLRPGFDQLIEIAALVTDGELNIIDDGIDLVIHAEEDKLAQMDEYVTNMHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
+SGLT+ V S L+ EAE++V+ +VK+ T +LAGNS+ D FL K MP+L +
Sbjct: 68 SSGLTEAVRASELSLAEAEERVLAYVKERFPAPRTAILAGNSIATDRSFLAKDMPELDAW 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVS+IK L RWYPR Y P K HRAL DI ES+ EL+YY+ F
Sbjct: 128 LHYRMVDVSTIKELSRRWYPRIYFNQPEKGLAHRALADIVESVRELRYYRSTAF 181
>gi|77359452|ref|YP_339027.1| oligoribonuclease [Pseudoalteromonas haloplanktis TAC125]
gi|123587965|sp|Q3IG97.1|ORN_PSEHT RecName: Full=Oligoribonuclease
gi|76874363|emb|CAI85584.1| oligoribonuclease [Pseudoalteromonas haloplanktis TAC125]
Length = 181
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ+ E LD+M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSNELLDNMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A +Q + F+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTYDEAYAVEQTIAFLKQWVPAGASPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P +V +K+ H ALDDI++SIMELK Y+E F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLAQV-NKKGSHLALDDIKDSIMELKVYREKFF 179
>gi|262374198|ref|ZP_06067474.1| oligoribonuclease [Acinetobacter junii SH205]
gi|262310756|gb|EEY91844.1| oligoribonuclease [Acinetobacter junii SH205]
Length = 184
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIITDDNLNILAEGPVLAVHQSDLILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L+ ++AE+Q +EF+KK V + + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLSAQDAEQQTLEFLKKWVNPKSSPMCGNSICQDRRFLHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIMN 183
>gi|300780594|ref|ZP_07090449.1| oligoribonuclease [Corynebacterium genitalium ATCC 33030]
gi|300533580|gb|EFK54640.1| oligoribonuclease [Corynebacterium genitalium ATCC 33030]
Length = 217
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 108/173 (62%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWIDLEMTGL + I+E+A ++TD +L G DLV+H T L M ++ H
Sbjct: 19 IVWIDLEMTGLDPQRHVIVEVAALVTDAELNILDGGIDLVVHATDAELAEMDDFVTEMHG 78
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGLT+++ S + REAE+ V+E V K+ G + P LAGNS+ D F++ +MP+L
Sbjct: 79 SSGLTEQIKASTVALREAEEAVLELVDKHCGEHRPPLAGNSIATDRTFIRAHMPELDERL 138
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS+IK L RWYP+ Y P K HRAL DI ESI EL YY+ +F
Sbjct: 139 HYRMIDVSTIKELTRRWYPKAYYNQPGKGMAHRALADIVESIRELDYYRRAVF 191
>gi|323498389|ref|ZP_08103386.1| oligoribonuclease [Vibrio sinaloensis DSM 21326]
gi|323316531|gb|EGA69545.1| oligoribonuclease [Vibrio sinaloensis DSM 21326]
Length = 181
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ+ L M EWC H
Sbjct: 8 LIWMDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQSDAELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +TE++A +Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 GSGLVARVKASQVTEQDAIRQTIEFLEKWVPKGKSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK H ALDDIRESI ELKYY++ IF
Sbjct: 128 HYRYVDVSTLKELTRRWKPEVLDGF-SKSGSHLALDDIRESIAELKYYRQTIF 179
>gi|317507722|ref|ZP_07965427.1| exonuclease [Segniliparus rugosus ATCC BAA-974]
gi|316253975|gb|EFV13340.1| exonuclease [Segniliparus rugosus ATCC BAA-974]
Length = 202
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WID EMTGL+ D+++EIA ++TDG L EG DLVIH +++ L M E+ N H
Sbjct: 8 LLWIDCEMTGLRPGHDQLIEIAALVTDGDLNILDEGIDLVIHASEDKLAQMDEYVTNMHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
+SGLT V + L+ EAE +V+ +VK+ T +LAGNS+ D FL K MP+L +
Sbjct: 68 SSGLTDAVRAATLSLAEAEAKVLAYVKERFPAPRTAILAGNSIATDRSFLAKDMPELDAW 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVS+IK L RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 128 LHYRMVDVSTIKELSRRWYPRIYFNQPEKGLAHRALADIVESIRELRYYRATAF 181
>gi|393237340|gb|EJD44883.1| ribonuclease H-like protein [Auricularia delicata TFB-10046 SS5]
Length = 194
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 115/187 (61%), Gaps = 5/187 (2%)
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
TPL E PL+W+D EMTGL+ + D +LEIA IIT+G+LT +G VI K LD+
Sbjct: 5 TPLRLE-DGPLIWVDCEMTGLEPKTDVLLEIAVIITNGQLTPVDDGISYVIQTPKRVLDN 63
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFL 179
M EWC N H SGLT+ L+S T + V+ ++K+ V T +LAGNSV+ D MFL
Sbjct: 64 MNEWCINQHGKSGLTQACLNSPHTHSWVQDTVLTYIKRWVPDERTGVLAGNSVHADRMFL 123
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPS---KEQKHRALDDIRESIMELK 236
++M + + +VDVS+IK L RWYP S KE HRALDDI SI EL+
Sbjct: 124 AEHMRPIVDHLHYRIVDVSTIKELTKRWYPNKAEGRLSRVAKESSHRALDDILGSIEELR 183
Query: 237 YYKENIF 243
+Y+EN+F
Sbjct: 184 WYRENVF 190
>gi|306836747|ref|ZP_07469709.1| oligoribonuclease [Corynebacterium accolens ATCC 49726]
gi|304567369|gb|EFM42972.1| oligoribonuclease [Corynebacterium accolens ATCC 49726]
Length = 213
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E I+E+A +ITDG L +G DLV+H T+E L M + H
Sbjct: 16 LVWIDLEMTGLDPERHVIVEVAAVITDGNLNILGKGIDLVVHATEEELSQMDSFVTEMHA 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K++ S T REAE V+ + ++ PL AGNS+ D F++ YMP L
Sbjct: 76 NSGLDKEIRQSTTTIREAEDAVLALINEHCEHPAPL-AGNSIATDRTFIRAYMPRLDEAL 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RW+PR Y P K HRAL DI ESI EL +Y+ ++F+T+
Sbjct: 135 HYRMIDVSTIKELARRWHPRAYYNQPDKGMAHRALQDIIESIRELDFYRRSVFRTD 190
>gi|262184889|ref|ZP_06044310.1| oligoribonuclease [Corynebacterium aurimucosum ATCC 700975]
Length = 214
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + I+E+A ++TD +L EG D+V+H T+E L M ++ H
Sbjct: 15 LVWIDLEMTGLDPKRHVIVEVAAVVTDAELNILDEGIDIVVHATEEELAQMDDFVTEMHA 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGL K++ S +T EAE+ V++ V+K+ P LAGNS+ D F+++YMP L +
Sbjct: 75 KSGLDKEIRESAITIAEAEEAVLKLVEKHCDANHPAPLAGNSIATDRTFIREYMPRLDAA 134
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RW+PR Y P K HRAL DI ESI EL +Y+ ++F+T+
Sbjct: 135 LHYRMIDVSTIKELARRWHPRAYYNQPDKGMAHRALQDIIESIRELDFYRRSVFRTD 191
>gi|260549063|ref|ZP_05823284.1| oligoribonuclease Orn [Acinetobacter sp. RUH2624]
gi|424056986|ref|ZP_17794503.1| oligoribonuclease [Acinetobacter nosocomialis Ab22222]
gi|425741748|ref|ZP_18859887.1| oligoribonuclease [Acinetobacter baumannii WC-487]
gi|445437346|ref|ZP_21440992.1| oligoribonuclease [Acinetobacter baumannii OIFC021]
gi|260407791|gb|EEX01263.1| oligoribonuclease Orn [Acinetobacter sp. RUH2624]
gi|407440519|gb|EKF47036.1| oligoribonuclease [Acinetobacter nosocomialis Ab22222]
gi|425491459|gb|EKU57743.1| oligoribonuclease [Acinetobacter baumannii WC-487]
gi|444753928|gb|ELW78564.1| oligoribonuclease [Acinetobacter baumannii OIFC021]
Length = 188
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L IHQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDHLNVLAEGPVLAIHQPDRILNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT R+AE Q +EF+KK V + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCGNSICQDRRFLHRLMPELEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS+IK L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSTIKELSKRWRPEIMSGL-KKNASHLAMDDIRDSISELKYYREYFFIMN 183
>gi|406913825|gb|EKD53142.1| Oligoribonuclease [uncultured bacterium]
Length = 181
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 114/177 (64%), Gaps = 6/177 (3%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
P +W+DLE T L ++ I+EIA ++TDG L GPDLVIHQ + L SM +W ++H
Sbjct: 9 PFIWLDLEFTDLDVKKGVIVEIASVVTDGNLKILDTGPDLVIHQPESILGSMVKWNRDHF 68
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT+++ S +T EAEK+ ++F+KK +T LLAG+S+Y+D FL+ +MP L
Sbjct: 69 GESGLTEEIRRSTITTEEAEKETIKFLKKYCAPHTALLAGSSIYMDREFLRIHMPALYDF 128
Query: 190 FSHVLVDVSSIKALCMRWYPR--DYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VD ++IK L RWYP D+ KV + HRA DI ESI ELKYY+ +FK
Sbjct: 129 VHYRIVDTNTIKELMHRWYPNIPDFPKV----EAHRAKADILESIDELKYYQSVVFK 181
>gi|451812270|ref|YP_007448724.1| oligoribonuclease [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778172|gb|AGF49120.1| oligoribonuclease [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 181
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EM+GL DRILE+A +ITD L EGP + IHQT E L+SM +W ++ H
Sbjct: 8 LVWLDMEMSGLDPSKDRILEVAVVITDDNLDVIAEGPVIAIHQTNELLESMDKWNKSVHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +VL S ++E+EAE ++ F+K + L GN++ D F+ YM L F
Sbjct: 68 KSGLINRVLSSDISEKEAEDSILLFLKNYISPDKSPLCGNTIGQDRRFMNVYMQRLEKFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSSIK L RWYP Y+ SK KH+AL DI +SI EL+YY++ FK
Sbjct: 128 HYRNIDVSSIKELVKRWYPSMYKNF-SKNSKHQALSDIHDSINELRYYRKYFFK 180
>gi|262201950|ref|YP_003273158.1| exonuclease RNase T and DNA polymerase III [Gordonia bronchialis
DSM 43247]
gi|262085297|gb|ACY21265.1| Exonuclease RNase T and DNA polymerase III [Gordonia bronchialis
DSM 43247]
Length = 194
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 72 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEA 131
+WID EMTGL +E D+++EIA ++TDG L EG D+VIH + L +M + H
Sbjct: 1 MWIDCEMTGLSLESDKLIEIAALVTDGDLNILGEGVDVVIHADDDALANMPDVVTKMHAD 60
Query: 132 SGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +T EAEK V+++++ +V T + LAGNS+ D F+ + MP+L +
Sbjct: 61 SGLTEEVRASTVTLAEAEKLVLDYIRAHVTTAGAVPLAGNSIATDRGFIARDMPELDAYL 120
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+ F
Sbjct: 121 HYRMVDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIRESIRELRYYRAAAF 173
>gi|344943082|ref|ZP_08782369.1| Oligoribonuclease [Methylobacter tundripaludum SV96]
gi|344260369|gb|EGW20641.1| Oligoribonuclease [Methylobacter tundripaludum SV96]
Length = 181
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+EIA IITD L +GP L +HQ+ L +M EW Q+HH
Sbjct: 8 LIWIDLEMTGLDPDNDLIIEIATIITDKDLNILAQGPVLAVHQSDAALGAMDEWNQHHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + EAE+Q +EF+K+ V T + GNS+ D FL +YMP L + F
Sbjct: 68 QSGLIARVKASTIDAEEAERQTIEFLKQWVPENTSPICGNSIGQDRRFLYRYMPKLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ ++ K H+ALDDI ESI EL+YY+E+ +
Sbjct: 128 HYRNIDVSTVKELAARWAPQ-VKEGFKKASTHQALDDIIESIEELRYYREHFIR 180
>gi|420260840|ref|ZP_14763509.1| oligoribonuclease [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404511678|gb|EKA25544.1| oligoribonuclease [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 181
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +AE Q +EF+K+ V T + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>gi|407069790|ref|ZP_11100628.1| oligoribonuclease [Vibrio cyclitrophicus ZF14]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ + LD M EWC H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPQSELDKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K++ S ++E++A +Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 GSGLVKRIQESTVSEQDAIQQTIEFLEKWVPKGKSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK H ALDDIRESI EL+YY++ I
Sbjct: 128 HYRYVDVSTLKELTRRWKPEVLDGF-SKSGSHLALDDIRESIAELQYYRKTII 179
>gi|438000066|ref|YP_007183799.1| oligoribonuclease [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451812996|ref|YP_007449449.1| oligoribonuclease [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429339300|gb|AFZ83722.1| oligoribonuclease [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451778965|gb|AGF49845.1| oligoribonuclease [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EM+GL D+ILE+A +ITD L + +EGP +VIHQT E L+SM +W ++ H
Sbjct: 8 LVWLDMEMSGLDPLKDKILEVAVVITDENLDEIIEGPVIVIHQTNEILESMDKWNKSVHS 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KVL S ++E+EAE ++ F++ + + L GN++ D F+ YM L F
Sbjct: 68 KSGLVDKVLSSEISEKEAEDNILLFLENYINSGVSPLCGNTISQDRRFMNIYMSRLEKFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSSIK L RW P Y+ SK KH+AL DI +SI EL+YY++ FK
Sbjct: 128 HYRNIDVSSIKELAKRWSPNAYKNF-SKNSKHQALSDIYDSINELRYYRKYFFK 180
>gi|408372540|ref|ZP_11170240.1| oligoribonuclease [Alcanivorax hongdengensis A-11-3]
gi|407767515|gb|EKF75952.1| oligoribonuclease [Alcanivorax hongdengensis A-11-3]
Length = 185
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP L ++Q+ LD M EW HH
Sbjct: 12 LIWIDLEMTGLSPENDRIIEIATIVTDANLNVLAEGPVLAVYQSNALLDGMDEWNTEHHN 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + E AE + + F+++ V + GNS+ D FL YMP L + F
Sbjct: 72 NSGLVARVQASTVNEAGAESRTIAFLEQYVEAGMSPMCGNSICQDRRFLANYMPKLEAFF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SKE KH ALDDIRESI EL YY+E+
Sbjct: 132 HYRNLDVSTLKELARRWKPGILGGF-SKENKHLALDDIRESIAELAYYREHFI 183
>gi|332160015|ref|YP_004296592.1| oligoribonuclease [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386311047|ref|YP_006007103.1| 3'-to-5' oligoribonuclease [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418239922|ref|ZP_12866466.1| oligoribonuclease [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|318607428|emb|CBY28926.1| 3'-to-5' oligoribonuclease (orn) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664245|gb|ADZ40889.1| oligoribonuclease [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330862350|emb|CBX72509.1| oligoribonuclease [Yersinia enterocolitica W22703]
gi|351780748|gb|EHB22813.1| oligoribonuclease [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPEKDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +AE Q +EF+K+ V T + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>gi|149192489|ref|ZP_01870676.1| oligoribonuclease [Vibrio shilonii AK1]
gi|148833680|gb|EDL50730.1| oligoribonuclease [Vibrio shilonii AK1]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP + IHQ+ E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPEQHKIIEIASIVTDSELNILAEGPVIAIHQSDEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S E EA KQ + F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVARVKDSEYDEAEAIKQTITFLEQWVPKGKSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK+ H ALDDIRESI ELKYY+E IF
Sbjct: 128 HYRYVDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIF 179
>gi|422015303|ref|ZP_16361902.1| oligoribonuclease [Providencia burhodogranariea DSM 19968]
gi|414099468|gb|EKT61109.1| oligoribonuclease [Providencia burhodogranariea DSM 19968]
Length = 180
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L +GP + ++QT E L M EW N H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDSQLNILAQGPVIAVNQTPEQLALMDEWNVNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V +S EREAE+ +EF+++ V + GNSV D FL +YM +L S F
Sbjct: 68 GSGLVERVKNSTFAEREAEQATIEFLEQWVPKGVSPICGNSVGQDRRFLFRYMSELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+ALDDIRESI EL YY+E K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKKGTHQALDDIRESIAELAYYRETFIK 180
>gi|388455173|ref|ZP_10137468.1| oligoribonuclease [Fluoribacter dumoffii Tex-KL]
Length = 185
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+E+A ++TD L EGP I Q K LDSM W H
Sbjct: 7 LIWIDLEMTGLDPERDRIIELATVVTDPHLNIIAEGPVFAISQPKTLLDSMDSWNTKQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+VL S +E++AE+ + F+K+ + + GNSV D FL KYMPDLA+ F
Sbjct: 67 QSGLVKRVLDSQTSEQQAEQLTINFLKQYLDKGKSPMCGNSVCQDRRFLYKYMPDLAAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L +RW P V KE KH ALDDI++SI EL YY+ +
Sbjct: 127 HYRNLDVSTLKELAIRWRPELLNGV-VKESKHLALDDIKDSIAELVYYRHHFI 178
>gi|359435628|ref|ZP_09225820.1| oligoribonuclease [Pseudoalteromonas sp. BSi20652]
gi|357917723|dbj|GAA62069.1| oligoribonuclease [Pseudoalteromonas sp. BSi20652]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ+ E L+ M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSDELLNGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A Q ++F+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTYDEAYAVAQTLDFLKQWVPAGVSPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P +V +K+ H ALDDI++SIMELK Y+EN F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLGQV-NKKGSHLALDDIKDSIMELKVYRENFF 179
>gi|424743244|ref|ZP_18171557.1| oligoribonuclease [Acinetobacter baumannii WC-141]
gi|422943505|gb|EKU38521.1| oligoribonuclease [Acinetobacter baumannii WC-141]
Length = 188
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDHLNVLAEGPVLAVHQPDRILNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT R+AE Q +EF+KK V + GNS+ D FL + MP+L F
Sbjct: 69 QSGLVERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCGNSICQDRRFLHRLMPELEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS+IK L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSTIKELSKRWRPEIMSGL-KKNASHLAMDDIRDSISELKYYREYFFIMN 183
>gi|354722101|ref|ZP_09036316.1| oligoribonuclease [Enterobacter mori LMG 25706]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ + L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +REAE+ +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVERVKASTQGDREAEQATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|238784781|ref|ZP_04628783.1| Oligoribonuclease [Yersinia bercovieri ATCC 43970]
gi|238714294|gb|EEQ06304.1| Oligoribonuclease [Yersinia bercovieri ATCC 43970]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQT E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQTDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++ +AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFSDHDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>gi|255020848|ref|ZP_05292904.1| Oligoribonuclease [Acidithiobacillus caldus ATCC 51756]
gi|340781415|ref|YP_004748022.1| Oligoribonuclease [Acidithiobacillus caldus SM-1]
gi|254969639|gb|EET27145.1| Oligoribonuclease [Acidithiobacillus caldus ATCC 51756]
gi|340555568|gb|AEK57322.1| Oligoribonuclease [Acidithiobacillus caldus SM-1]
Length = 200
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E D+ILEIA I+TD +L EGP L +HQ++ L +M +W Q H
Sbjct: 8 LVWIDLEMTGLNPERDQILEIASIVTDNELRVLSEGPVLAVHQSEAVLAAMDDWNQRTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L E Q ++F++ +V T L GNSV D FL + MP L
Sbjct: 68 NSGLVQRVRESRLDLGAVEAQTLDFLQAHVQPGTAPLCGNSVCQDRRFLARLMPRLERFL 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ L+DVS+IK L RWYP R K ++H AL DIRESI EL+YY+E +F
Sbjct: 128 HYRLIDVSTIKELAYRWYPSLPRY--PKTERHEALADIRESIGELQYYRERLF 178
>gi|218708317|ref|YP_002415938.1| oligoribonuclease [Vibrio splendidus LGP32]
gi|218321336|emb|CAV17286.1| Oligoribonuclease [Vibrio splendidus LGP32]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ + LD M EWC H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPQSELDKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K++ S ++E++A +Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 GSGLVKRIQDSTVSEQDAIQQTIEFLEKWVPKGKSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK H ALDDIRESI EL+YY++ I
Sbjct: 128 HYRYVDVSTLKELTRRWKPEVLDGF-SKSGSHLALDDIRESIAELQYYRKTII 179
>gi|443289210|ref|ZP_21028304.1| Oligoribonuclease [Micromonospora lupini str. Lupac 08]
gi|385887888|emb|CCH16378.1| Oligoribonuclease [Micromonospora lupini str. Lupac 08]
Length = 196
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++E+A ++TD L +G D+VIH + L++M E Q H
Sbjct: 5 LVWIDCEMTGLDLGSDKLIEVAALVTDPDLNVLGDGVDVVIHADEAALEAMPEIVQTMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE +V+E+V V T L GNS+ D F+ + MP L +
Sbjct: 65 KSGLTEEVRRSAVTLAEAEDRVLEYVSTFVKDPRTAPLCGNSIATDRGFIARDMPRLDAH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DIRESI EL+YY+ IF
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRVYFGQPQKGLAHRALADIRESIRELEYYRRTIF 178
>gi|418020751|ref|ZP_12659959.1| Oligoribonuclease 3''->5'' exoribonuclease [Candidatus Regiella
insecticola R5.15]
gi|347603896|gb|EGY28653.1| Oligoribonuclease 3''->5'' exoribonuclease [Candidatus Regiella
insecticola R5.15]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 66 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWC 125
E K L+WIDLEMTGL DRI+EIA ++T+ L EGP + IHQ+ E L+ M EW
Sbjct: 3 EIKNNLIWIDLEMTGLDPRQDRIIEIATLVTNADLAILAEGPVIAIHQSAETLNLMDEWN 62
Query: 126 QNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPD 185
H SGL ++V +S E A +Q +EF+KK V + GNSV D FL +YMP+
Sbjct: 63 TRTHNGSGLVERVKNSTTDEAAAAQQTIEFLKKYVPQGVSPICGNSVGQDRRFLFRYMPE 122
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
L F + +DVS++K L RW P + K +K+ HRALDDIRES+ EL YY+E+ +
Sbjct: 123 LEKYFHYRYLDVSTLKELAHRWKP-EILKGFTKKNTHRALDDIRESVAELVYYREHFIQ 180
>gi|326382785|ref|ZP_08204475.1| oligoribonuclease [Gordonia neofelifaecis NRRL B-59395]
gi|326198375|gb|EGD55559.1| oligoribonuclease [Gordonia neofelifaecis NRRL B-59395]
Length = 199
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD L EG D+VIH E L +M + H
Sbjct: 5 LVWIDCEMTGLDVGSDKLIEIAALVTDSDLNILGEGVDVVIHADDEALAAMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAEK V++++++++ T LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTEEVRASTVTLAEAEKAVLDYLREHITTAGAAPLAGNSIATDRGFIARDMPELNAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RW+P Y P K HRAL DIRESI EL+YY+E F
Sbjct: 125 LHYRMVDVSSIKELCRRWFPPIYFGQPQKGLAHRALADIRESIRELRYYREAAF 178
>gi|89075319|ref|ZP_01161741.1| oligoribonuclease, partial [Photobacterium sp. SKA34]
gi|90581256|ref|ZP_01237053.1| oligoribonuclease [Photobacterium angustum S14]
gi|89048868|gb|EAR54437.1| oligoribonuclease [Photobacterium sp. SKA34]
gi|90437495|gb|EAS62689.1| oligoribonuclease [Vibrio angustum S14]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+EIA I+TD +L EGP L IHQ + LD M +WC N H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEIATIVTDPQLNILAEGPVLAIHQPEAELDKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +++ S +TE++A Q + F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 NSGLVERIRKSTVTEQQAVAQTIAFLEQWVPKGASPICGNSIGQDRRFLYKHMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P + +K+ H ALDDIR+SI EL+YY+ENIF
Sbjct: 128 HYRYLDVSTLKELTRRWKPELLDGL-NKKGSHLALDDIRDSIDELRYYRENIF 179
>gi|347540137|ref|YP_004847562.1| oligoribonuclease [Pseudogulbenkiania sp. NH8B]
gi|345643315|dbj|BAK77148.1| oligoribonuclease [Pseudogulbenkiania sp. NH8B]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+EIA ++TDG+L E P L IHQ LD M EW ++ H
Sbjct: 8 LIWLDMEMTGLNPDSDRIIEIAVVVTDGQLNVLAESPVLAIHQPDSVLDGMDEWNKSTHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L+E +AE+Q++ F+++ V T + GNS+ D F+ + MP L + F
Sbjct: 68 RSGLIERVKASTLSEADAEEQMLAFLQEYVPAKTSPMCGNSICQDRRFMARGMPRLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P R V K+ +H+AL DI ESI ELKYY+E+ K
Sbjct: 128 HYRNLDVSTLKELCKRWKPEVARGV-VKKGRHQALADILESIEELKYYREHFIK 180
>gi|262280955|ref|ZP_06058738.1| oligoribonuclease [Acinetobacter calcoaceticus RUH2202]
gi|262257855|gb|EEY76590.1| oligoribonuclease [Acinetobacter calcoaceticus RUH2202]
Length = 188
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDNLNVLAEGPVLAVHQPDRILNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT R+AE Q +EF+KK V + GNS+ D FL + MP+L F
Sbjct: 69 QSGLVERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCGNSICQDRRFLHRLMPELEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSTVKELSKRWRPEIMSGL-KKNASHLAMDDIRDSISELKYYREYFFIMN 183
>gi|224824186|ref|ZP_03697294.1| Exonuclease RNase T and DNA polymerase III [Pseudogulbenkiania
ferrooxidans 2002]
gi|224603605|gb|EEG09780.1| Exonuclease RNase T and DNA polymerase III [Pseudogulbenkiania
ferrooxidans 2002]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+EIA ++TDG+L E P L IHQ LD M EW ++ H
Sbjct: 8 LIWLDMEMTGLNPDSDRIIEIAVVVTDGQLNVLAESPVLAIHQPDSVLDGMDEWNKSTHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L+E +AE+Q++ F+++ V T + GNS+ D F+ + MP L + F
Sbjct: 68 RSGLIERVKASTLSETDAEEQMLAFLQEYVPAKTSPMCGNSICQDRRFMARGMPRLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P R V K+ +H+AL DI ESI ELKYY+E+ K
Sbjct: 128 HYRNLDVSTLKELCKRWKPEVARGV-VKKGRHQALADILESIEELKYYREHFIK 180
>gi|359445010|ref|ZP_09234769.1| oligoribonuclease [Pseudoalteromonas sp. BSi20439]
gi|358041139|dbj|GAA71018.1| oligoribonuclease [Pseudoalteromonas sp. BSi20439]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ+ E LD M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSDELLDGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A +Q + F+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTFNEAYAVEQTLAFLKQWVPAGASPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P +V +K+ H ALDDI++SIMELK Y+E F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPDVLAQV-NKKGSHLALDDIKDSIMELKVYREKFF 179
>gi|395232139|ref|ZP_10410390.1| Exonuclease RNase T and DNA polymerase III [Enterobacter sp. Ag1]
gi|394733125|gb|EJF32753.1| Exonuclease RNase T and DNA polymerase III [Enterobacter sp. Ag1]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S L +R AE +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASSLDDRAAELATLEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKP---EILPGFKKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|453073850|ref|ZP_21976649.1| oligoribonuclease [Rhodococcus triatomae BKS 15-14]
gi|452765876|gb|EME24130.1| oligoribonuclease [Rhodococcus triatomae BKS 15-14]
Length = 199
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++E+A ++TD +L EG D+VIH L M E Q H
Sbjct: 5 LVWIDCEMTGLRLGSDKLIEVAALVTDSELNILGEGVDIVIHADDAALADMPEVVQEMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EA+++V+ ++++++ T T L GNS+ D FL + MP+L
Sbjct: 65 KSGLTDEVRASTVTMEEAQERVLAYIREHIPTAGTAPLCGNSIATDRGFLARDMPELDEY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIKESIRELQYYRRTAF 178
>gi|407792451|ref|ZP_11139507.1| oligoribonuclease [Gallaecimonas xiamenensis 3-C-1]
gi|407197124|gb|EKE67209.1| oligoribonuclease [Gallaecimonas xiamenensis 3-C-1]
Length = 182
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ LD+M EWC H
Sbjct: 6 LIWIDLEMTGLDPERERIIEIATIVTDPDLNVLAEGPVLAVHQSDALLDAMDEWCTRTHT 65
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL +V S ++E +AE+Q ++F+ + V + GNS+ D FL KYMP+L + F
Sbjct: 66 NNGLIARVKASNVSEADAERQTLDFLARWVDKGASPICGNSIGQDRRFLVKYMPELEAYF 125
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P + K K + H ALDDIRESI EL++Y+++ K
Sbjct: 126 HYRNLDVSTLKELARRWAP-EVLKGFKKGETHLALDDIRESIAELRHYRQHFLKV 179
>gi|330444995|ref|ZP_08308649.1| oligoribonuclease monomer [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493113|dbj|GAA03146.1| oligoribonuclease monomer [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 181
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+EIA I+TD +L EGP L IHQ++E L M +WC N H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEIATIVTDPQLNILAEGPVLAIHQSEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++ S +TE++A Q + F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 NSGLVDRIRKSTVTEQQAVAQTIAFLEQWVPKGVSPICGNSIGQDRRFLYKHMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SK+ H ALDDIR+SI EL+YY+ENIF
Sbjct: 128 HYRYLDVSTLKELTRRWKPELLDGF-SKKGSHLALDDIRDSIDELRYYRENIF 179
>gi|367011319|ref|XP_003680160.1| hypothetical protein TDEL_0C00600 [Torulaspora delbrueckii]
gi|359747819|emb|CCE90949.1| hypothetical protein TDEL_0C00600 [Torulaspora delbrueckii]
Length = 250
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 116/178 (65%), Gaps = 2/178 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGP-DLVIHQTKECLDSMGEWCQNH 128
PLVWID EMTGL + DRI+EI CIITDG+L + + VIH + LD M EWC H
Sbjct: 33 PLVWIDCEMTGLDHQRDRIIEICCIITDGELNVVQDNCYESVIHCDRSVLDGMNEWCIEH 92
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H ASGLTKKVL S T+ + E+++++F+K+ V + LLAGNSV++D +F+ K P +
Sbjct: 93 HGASGLTKKVLESTKTKEQVEQELLQFIKRYVPDSRVGLLAGNSVHMDRLFMLKDFPSIV 152
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +VDVSSI +C R P + P K++ H A DI ESI +L++Y+++ FK+
Sbjct: 153 DHLFYRIVDVSSIMEVCRRHNPSLSKLAPRKDKNHTAKSDILESIEQLQWYRDHYFKS 210
>gi|417951141|ref|ZP_12594248.1| oligoribonuclease [Vibrio splendidus ATCC 33789]
gi|342805093|gb|EGU40371.1| oligoribonuclease [Vibrio splendidus ATCC 33789]
Length = 181
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ + LD M EWC H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPQSELDKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K++ S +TE++A +Q + F++K V + GNS+ D FL K+MP+L F
Sbjct: 68 GSGLVKRIQESTITEQDAIEQTIAFLEKWVPKGKSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK H ALDDIRESI EL+YY++ I
Sbjct: 128 HYRYVDVSTLKELARRWKPEVLDGF-SKSGSHLALDDIRESIAELQYYRKTII 179
>gi|357389622|ref|YP_004904462.1| putative oligoribonuclease [Kitasatospora setae KM-6054]
gi|311896098|dbj|BAJ28506.1| putative oligoribonuclease [Kitasatospora setae KM-6054]
Length = 200
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ D ++E+A ++TD +L EG D++I E L+ M E + H
Sbjct: 5 LVWIDCEMTGLDLDRDALIEVAALVTDSELNVLGEGVDVIIRPPAEALEGMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L GLT EA+++V+ +V+++V TPL GNSV D FL + MP+L
Sbjct: 65 ASGLLDE-LADGLTMAEAQERVLAYVREHVPEAGRTPL-CGNSVATDRGFLSRDMPELEG 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 HLHYRIVDVSSIKELARRWYPRAYYNSPQKGGNHRALADIRESIAELRYYREAVF 177
>gi|50086122|ref|YP_047632.1| oligoribonuclease [Acinetobacter sp. ADP1]
gi|59798028|sp|Q6F805.1|ORN_ACIAD RecName: Full=Oligoribonuclease
gi|49532098|emb|CAG69810.1| oligoribonuclease [Acinetobacter sp. ADP1]
Length = 183
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDHLNIVAEGPVLAVHQPDRILNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT R+ E Q +EF+KK V T + GNS+ D F+ + MP+L F
Sbjct: 69 QSGLIERVRRSKLTARDVELQTLEFLKKWVNPKTSPMCGNSICQDRRFMHRLMPELEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSISELKYYREYFFIKN 183
>gi|334336575|ref|YP_004541727.1| oligoribonuclease [Isoptericola variabilis 225]
gi|334106943|gb|AEG43833.1| Oligoribonuclease [Isoptericola variabilis 225]
Length = 212
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 113/174 (64%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +LT +G D+VI + L+ M ++ + H
Sbjct: 10 IVWIDCEMTGLDVRADALVEVAAVVTDSELTVLGDGVDVVIAPPADALEQMSDFVREMHT 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
ASGL + L SG+T EAEK V+++V++ V LAGNSV D MFL + MP+L +
Sbjct: 70 ASGLITE-LPSGVTLAEAEKTVLDYVREWVPEPRRAPLAGNSVGTDKMFLDRDMPELVNH 128
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P KE HRAL DI ESI EL+YY+E +F
Sbjct: 129 LHYRIVDVSSIKELARRWYPRVYFASPKKEGGHRALADILESIDELRYYREALF 182
>gi|262371112|ref|ZP_06064434.1| oligoribonuclease [Acinetobacter johnsonii SH046]
gi|381197813|ref|ZP_09905152.1| oligoribonuclease [Acinetobacter lwoffii WJ10621]
gi|262313998|gb|EEY95043.1| oligoribonuclease [Acinetobacter johnsonii SH046]
Length = 184
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+E+A I+TD L EGP L +HQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEVATIVTDDNLNILAEGPVLAVHQPDRVLNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V + + GNS+ D FL + MP++ F
Sbjct: 69 QSGLIERVRRSKLTAQDAEQQTLEFLKKWVNPKSSPMCGNSICQDRRFLHRLMPEMEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIMN 183
>gi|169634394|ref|YP_001708130.1| oligoribonuclease [Acinetobacter baumannii SDF]
gi|169797233|ref|YP_001715026.1| oligoribonuclease [Acinetobacter baumannii AYE]
gi|213155973|ref|YP_002318018.1| oligoribonuclease [Acinetobacter baumannii AB0057]
gi|215484674|ref|YP_002326909.1| Oligoribonuclease [Acinetobacter baumannii AB307-0294]
gi|229577105|ref|YP_001083587.2| oligoribonuclease [Acinetobacter baumannii ATCC 17978]
gi|239500755|ref|ZP_04660065.1| oligoribonuclease [Acinetobacter baumannii AB900]
gi|293610306|ref|ZP_06692607.1| oligoribonuclease [Acinetobacter sp. SH024]
gi|301346492|ref|ZP_07227233.1| oligoribonuclease [Acinetobacter baumannii AB056]
gi|301509982|ref|ZP_07235219.1| oligoribonuclease [Acinetobacter baumannii AB058]
gi|301594203|ref|ZP_07239211.1| oligoribonuclease [Acinetobacter baumannii AB059]
gi|332851262|ref|ZP_08433335.1| oligoribonuclease [Acinetobacter baumannii 6013150]
gi|332866131|ref|ZP_08436846.1| oligoribonuclease [Acinetobacter baumannii 6013113]
gi|332874063|ref|ZP_08441998.1| oligoribonuclease [Acinetobacter baumannii 6014059]
gi|375137062|ref|YP_004997712.1| oligoribonuclease [Acinetobacter calcoaceticus PHEA-2]
gi|384130535|ref|YP_005513147.1| oligoribonuclease [Acinetobacter baumannii 1656-2]
gi|384141818|ref|YP_005524528.1| oligoribonuclease [Acinetobacter baumannii MDR-ZJ06]
gi|385236129|ref|YP_005797468.1| oligoribonuclease [Acinetobacter baumannii TCDC-AB0715]
gi|387125225|ref|YP_006291107.1| oligoribonuclease [Acinetobacter baumannii MDR-TJ]
gi|403673361|ref|ZP_10935658.1| oligoribonuclease [Acinetobacter sp. NCTC 10304]
gi|407931465|ref|YP_006847108.1| oligoribonuclease [Acinetobacter baumannii TYTH-1]
gi|416146636|ref|ZP_11601299.1| oligoribonuclease [Acinetobacter baumannii AB210]
gi|417545722|ref|ZP_12196808.1| oligoribonuclease [Acinetobacter baumannii OIFC032]
gi|417547922|ref|ZP_12199003.1| oligoribonuclease [Acinetobacter baumannii Naval-18]
gi|417561975|ref|ZP_12212854.1| oligoribonuclease [Acinetobacter baumannii OIFC137]
gi|417567461|ref|ZP_12218333.1| oligoribonuclease [Acinetobacter baumannii OIFC143]
gi|417570124|ref|ZP_12220981.1| oligoribonuclease [Acinetobacter baumannii OIFC189]
gi|417576015|ref|ZP_12226860.1| exonuclease [Acinetobacter baumannii Naval-17]
gi|417871172|ref|ZP_12516115.1| oligoribonuclease [Acinetobacter baumannii ABNIH1]
gi|417875841|ref|ZP_12520642.1| oligoribonuclease [Acinetobacter baumannii ABNIH2]
gi|417879665|ref|ZP_12524222.1| oligoribonuclease [Acinetobacter baumannii ABNIH3]
gi|417882170|ref|ZP_12526478.1| oligoribonuclease [Acinetobacter baumannii ABNIH4]
gi|421201827|ref|ZP_15658982.1| oligoribonuclease [Acinetobacter baumannii AC12]
gi|421535247|ref|ZP_15981509.1| oligoribonuclease [Acinetobacter baumannii AC30]
gi|421620763|ref|ZP_16061692.1| oligoribonuclease [Acinetobacter baumannii OIFC074]
gi|421625659|ref|ZP_16066505.1| oligoribonuclease [Acinetobacter baumannii OIFC098]
gi|421630520|ref|ZP_16071223.1| oligoribonuclease [Acinetobacter baumannii OIFC180]
gi|421642834|ref|ZP_16083345.1| oligoribonuclease [Acinetobacter baumannii IS-235]
gi|421655113|ref|ZP_16095437.1| oligoribonuclease [Acinetobacter baumannii Naval-72]
gi|421659366|ref|ZP_16099587.1| oligoribonuclease [Acinetobacter baumannii Naval-83]
gi|421666450|ref|ZP_16106542.1| oligoribonuclease [Acinetobacter baumannii OIFC087]
gi|421671044|ref|ZP_16111026.1| oligoribonuclease [Acinetobacter baumannii OIFC099]
gi|421688366|ref|ZP_16128066.1| oligoribonuclease [Acinetobacter baumannii IS-143]
gi|421692430|ref|ZP_16132081.1| oligoribonuclease [Acinetobacter baumannii IS-116]
gi|421697927|ref|ZP_16137471.1| oligoribonuclease [Acinetobacter baumannii IS-58]
gi|421702265|ref|ZP_16141750.1| oligoribonuclease [Acinetobacter baumannii ZWS1122]
gi|421706004|ref|ZP_16145425.1| oligoribonuclease [Acinetobacter baumannii ZWS1219]
gi|421789295|ref|ZP_16225557.1| oligoribonuclease [Acinetobacter baumannii Naval-82]
gi|421798316|ref|ZP_16234341.1| oligoribonuclease [Acinetobacter baumannii Naval-21]
gi|421798768|ref|ZP_16234779.1| oligoribonuclease [Acinetobacter baumannii Canada BC1]
gi|421808086|ref|ZP_16243943.1| oligoribonuclease [Acinetobacter baumannii OIFC035]
gi|424053710|ref|ZP_17791241.1| oligoribonuclease [Acinetobacter baumannii Ab11111]
gi|424061175|ref|ZP_17798665.1| oligoribonuclease [Acinetobacter baumannii Ab33333]
gi|424064647|ref|ZP_17802131.1| oligoribonuclease [Acinetobacter baumannii Ab44444]
gi|425749324|ref|ZP_18867304.1| oligoribonuclease [Acinetobacter baumannii WC-348]
gi|427423096|ref|ZP_18913262.1| oligoribonuclease [Acinetobacter baumannii WC-136]
gi|445400148|ref|ZP_21429798.1| oligoribonuclease [Acinetobacter baumannii Naval-57]
gi|445446837|ref|ZP_21443468.1| oligoribonuclease [Acinetobacter baumannii WC-A-92]
gi|445458103|ref|ZP_21446927.1| oligoribonuclease [Acinetobacter baumannii OIFC047]
gi|445465200|ref|ZP_21449978.1| oligoribonuclease [Acinetobacter baumannii OIFC338]
gi|445486181|ref|ZP_21457239.1| oligoribonuclease [Acinetobacter baumannii AA-014]
gi|169150160|emb|CAM88054.1| oligoribonuclease [Acinetobacter baumannii AYE]
gi|169153186|emb|CAP02276.1| oligoribonuclease [Acinetobacter baumannii]
gi|193076335|gb|ABO10985.2| oligoribonuclease [Acinetobacter baumannii ATCC 17978]
gi|213055133|gb|ACJ40035.1| oligoribonuclease Orn [Acinetobacter baumannii AB0057]
gi|213985933|gb|ACJ56232.1| Oligoribonuclease [Acinetobacter baumannii AB307-0294]
gi|292827538|gb|EFF85902.1| oligoribonuclease [Acinetobacter sp. SH024]
gi|322506755|gb|ADX02209.1| Oligoribonuclease [Acinetobacter baumannii 1656-2]
gi|323516626|gb|ADX91007.1| oligoribonuclease [Acinetobacter baumannii TCDC-AB0715]
gi|325124507|gb|ADY84030.1| oligoribonuclease [Acinetobacter calcoaceticus PHEA-2]
gi|332730142|gb|EGJ61469.1| oligoribonuclease [Acinetobacter baumannii 6013150]
gi|332734772|gb|EGJ65866.1| oligoribonuclease [Acinetobacter baumannii 6013113]
gi|332737804|gb|EGJ68696.1| oligoribonuclease [Acinetobacter baumannii 6014059]
gi|333366017|gb|EGK48031.1| oligoribonuclease [Acinetobacter baumannii AB210]
gi|342224673|gb|EGT89697.1| oligoribonuclease [Acinetobacter baumannii ABNIH2]
gi|342225993|gb|EGT90969.1| oligoribonuclease [Acinetobacter baumannii ABNIH1]
gi|342227763|gb|EGT92676.1| oligoribonuclease [Acinetobacter baumannii ABNIH3]
gi|342238419|gb|EGU02852.1| oligoribonuclease [Acinetobacter baumannii ABNIH4]
gi|347592311|gb|AEP05032.1| oligoribonuclease [Acinetobacter baumannii MDR-ZJ06]
gi|385879717|gb|AFI96812.1| oligoribonuclease (3'->5' exoribonuclease) [Acinetobacter baumannii
MDR-TJ]
gi|395524557|gb|EJG12646.1| oligoribonuclease [Acinetobacter baumannii OIFC137]
gi|395550572|gb|EJG16581.1| oligoribonuclease [Acinetobacter baumannii OIFC189]
gi|395553133|gb|EJG19141.1| oligoribonuclease [Acinetobacter baumannii OIFC143]
gi|395569236|gb|EJG29898.1| exonuclease [Acinetobacter baumannii Naval-17]
gi|398328712|gb|EJN44835.1| oligoribonuclease [Acinetobacter baumannii AC12]
gi|400383610|gb|EJP42288.1| oligoribonuclease [Acinetobacter baumannii OIFC032]
gi|400388221|gb|EJP51293.1| oligoribonuclease [Acinetobacter baumannii Naval-18]
gi|404559716|gb|EKA64967.1| oligoribonuclease [Acinetobacter baumannii IS-116]
gi|404561109|gb|EKA66345.1| oligoribonuclease [Acinetobacter baumannii IS-143]
gi|404572973|gb|EKA78013.1| oligoribonuclease [Acinetobacter baumannii IS-58]
gi|404666857|gb|EKB34787.1| oligoribonuclease [Acinetobacter baumannii Ab33333]
gi|404667196|gb|EKB35117.1| oligoribonuclease [Acinetobacter baumannii Ab11111]
gi|404672730|gb|EKB40534.1| oligoribonuclease [Acinetobacter baumannii Ab44444]
gi|407195028|gb|EKE66164.1| oligoribonuclease [Acinetobacter baumannii ZWS1122]
gi|407195417|gb|EKE66551.1| oligoribonuclease [Acinetobacter baumannii ZWS1219]
gi|407900046|gb|AFU36877.1| oligoribonuclease [Acinetobacter baumannii TYTH-1]
gi|408509250|gb|EKK10925.1| oligoribonuclease [Acinetobacter baumannii Naval-72]
gi|408511400|gb|EKK13048.1| oligoribonuclease [Acinetobacter baumannii IS-235]
gi|408697373|gb|EKL42887.1| oligoribonuclease [Acinetobacter baumannii OIFC180]
gi|408697753|gb|EKL43259.1| oligoribonuclease [Acinetobacter baumannii OIFC098]
gi|408700040|gb|EKL45512.1| oligoribonuclease [Acinetobacter baumannii OIFC074]
gi|408708077|gb|EKL53355.1| oligoribonuclease [Acinetobacter baumannii Naval-83]
gi|409986800|gb|EKO42991.1| oligoribonuclease [Acinetobacter baumannii AC30]
gi|410383341|gb|EKP35874.1| oligoribonuclease [Acinetobacter baumannii OIFC099]
gi|410388375|gb|EKP40814.1| oligoribonuclease [Acinetobacter baumannii OIFC087]
gi|410394902|gb|EKP47226.1| oligoribonuclease [Acinetobacter baumannii Naval-21]
gi|410399225|gb|EKP51422.1| oligoribonuclease [Acinetobacter baumannii Naval-82]
gi|410411417|gb|EKP63288.1| oligoribonuclease [Acinetobacter baumannii Canada BC1]
gi|410416265|gb|EKP68040.1| oligoribonuclease [Acinetobacter baumannii OIFC035]
gi|425489397|gb|EKU55709.1| oligoribonuclease [Acinetobacter baumannii WC-348]
gi|425700196|gb|EKU69787.1| oligoribonuclease [Acinetobacter baumannii WC-136]
gi|444759779|gb|ELW84241.1| oligoribonuclease [Acinetobacter baumannii WC-A-92]
gi|444769666|gb|ELW93834.1| oligoribonuclease [Acinetobacter baumannii AA-014]
gi|444775747|gb|ELW99803.1| oligoribonuclease [Acinetobacter baumannii OIFC047]
gi|444779332|gb|ELX03326.1| oligoribonuclease [Acinetobacter baumannii OIFC338]
gi|444783530|gb|ELX07389.1| oligoribonuclease [Acinetobacter baumannii Naval-57]
gi|452955794|gb|EME61191.1| oligoribonuclease [Acinetobacter baumannii MSP4-16]
Length = 188
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L IHQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDHLNVLAEGPVLAIHQPDRILNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT R+AE Q +EF+KK V + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCGNSICQDRRFLHRLMPELEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSTVKELSKRWRPEIMSGL-KKNASHLAMDDIRDSISELKYYREYFFIMN 183
>gi|21672814|ref|NP_660881.1| oligoribonuclease [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008877|sp|Q8K909.1|ORN_BUCAP RecName: Full=Oligoribonuclease
gi|21623465|gb|AAM68092.1| hypothetical oligoribonuclease [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 184
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E+ RI+EIA +ITD KL EGP + IHQ +E + M EW H+
Sbjct: 8 LIWIDLEMTGLNSEIHRIIEIATVITDTKLNIISEGPVIAIHQKEEHIVIMDEWNTKIHK 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL K+V S E +AE + + F+KK V + + GNSVY D FL +YMP+L + F
Sbjct: 68 KNGLIKRVQKSIYNESKAESKTIFFLKKWVPIQSSPICGNSVYQDRKFLARYMPNLENYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS+IK L RW P ++K+ K+Q H AL+DI ESI+EL +YK+ F T
Sbjct: 128 HYRCIDVSTIKELVNRWCP-SFKKI--KKQNHTALEDIHESIIELNFYKKIFFDT 179
>gi|385208586|ref|ZP_10035454.1| oligoribonuclease (3'->5' exoribonuclease) [Burkholderia sp. Ch1-1]
gi|385180924|gb|EIF30200.1| oligoribonuclease (3'->5' exoribonuclease) [Burkholderia sp. Ch1-1]
Length = 207
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 112/184 (60%), Gaps = 2/184 (1%)
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
Q PL M LVW+D+EMTGL+ + DRI+EIA ++T+ L + VEGP L IHQ+ E L
Sbjct: 10 QPPL-VRSDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLA 68
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFL 179
M +W QN H SGL +V S ++E +A +Q+ +F+ V + GNS+ D F+
Sbjct: 69 GMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNSICQDRRFM 128
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
++MPDL F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+
Sbjct: 129 ARWMPDLERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYR 187
Query: 240 ENIF 243
E+
Sbjct: 188 EHFL 191
>gi|123440753|ref|YP_001004745.1| oligoribonuclease [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|166216592|sp|A1JIQ8.1|ORN_YERE8 RecName: Full=Oligoribonuclease
gi|122087714|emb|CAL10499.1| oligoribonuclease [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 181
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +AE Q +EF+K+ V T + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQ 180
>gi|410638333|ref|ZP_11348897.1| oligoribonuclease [Glaciecola lipolytica E3]
gi|410142253|dbj|GAC16102.1| oligoribonuclease [Glaciecola lipolytica E3]
Length = 181
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL+ E D ILEIA I+TD L EGP L IHQ+ + LD+M WC + H
Sbjct: 8 LVWIDLEMTGLEPETDVILEIATIVTDKNLNVLAEGPVLAIHQSNDVLDNMDAWCIDVHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++ S + E A KQ + F++K V L GN++ D FL KYMPDL + F
Sbjct: 68 KSGLTERCRTSDIDENTAVKQTIAFLEKYVPAGISPLCGNTIGQDRRFLVKYMPDLENYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P K+ H+ALDDIRESI EL YY++ +
Sbjct: 128 HYRSIDVSTLKELIKRWKPEVLDGF-HKKGTHQALDDIRESIQELVYYRQQVL 179
>gi|417692714|ref|ZP_12341905.1| exonuclease family protein [Shigella boydii 5216-82]
gi|332083162|gb|EGI88393.1| exonuclease family protein [Shigella boydii 5216-82]
Length = 181
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E+DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPELDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|312140423|ref|YP_004007759.1| exonuclease [Rhodococcus equi 103S]
gi|311889762|emb|CBH49079.1| exonuclease [Rhodococcus equi 103S]
Length = 199
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++ D+++EIA ++TD L EG D+VIH E L M + H
Sbjct: 5 LVWIDCEMTGLRLGSDKLIEIAALVTDSDLNILGEGVDIVIHADDEALADMPDVVTQMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE+ V+ +++++V T LAGNS+ D F+ + MP+L S
Sbjct: 65 KSGLTEEVRASTVTLAEAEQMVLAYIREHVPVAGTVPLAGNSIATDRGFIARDMPELDSH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLSHRALADIKESIRELQYYRRTAF 178
>gi|401761917|ref|YP_006576924.1| oligoribonuclease [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400173451|gb|AFP68300.1| oligoribonuclease [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 181
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ + L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S L +REAE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVDRVKASTLGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|375102049|ref|ZP_09748312.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
cyanea NA-134]
gi|374662781|gb|EHR62659.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
cyanea NA-134]
Length = 202
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L EG DLVIH E L +M + ++ H
Sbjct: 5 LVWIDCEMTGLDLAKDALIEIAVLVTDAELNVLGEGVDLVIHADDEALANMPDVVRDMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE++ + +V+++V T LAGNS+ D F+ + MP L S
Sbjct: 65 RSGLTEEVRRSTMTLEEAEQRALAYVREHVPDPQTAPLAGNSIATDRGFIARDMPALDSH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSVKELVRRWYPRVYYAKPEKGLAHRALADIRESIGELRYYRRTAF 178
>gi|90413340|ref|ZP_01221333.1| oligoribonuclease [Photobacterium profundum 3TCK]
gi|90325582|gb|EAS42051.1| oligoribonuclease [Photobacterium profundum 3TCK]
Length = 181
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E+ +I+EIA I+TD +L EGP L IHQ++ L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPEIHQIIEIATIVTDAQLNILAEGPVLAIHQSEAELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +++ S TE +A +Q + F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 NSGLVERIRQSAFTEEDAIRQTIAFLEQWVPKGASPICGNSIGQDRRFLYKHMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P SK+ H ALDDI +SI EL+YY+E+IF
Sbjct: 128 HYRYLDVSTIKELTRRWQPELLEGF-SKKGSHLALDDIHDSIAELRYYREHIF 179
>gi|134106503|ref|XP_778262.1| hypothetical protein CNBA2620 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260965|gb|EAL23615.1| hypothetical protein CNBA2620 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 214
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 118/190 (62%), Gaps = 13/190 (6%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
PL ++ PLVW+D EMTGL DRI+EIA IITDG+L G +I KE LD+M
Sbjct: 5 PLSYD-DGPLVWVDCEMTGLDFLNDRIIEIAVIITDGRLNPVDGGISYIIKTPKEVLDNM 63
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLK 180
G+WC+ H SGL + L S ++V++++++ + LLAG+SV+ D F+
Sbjct: 64 GDWCREQHGKSGLIQACLDSPYLYDTVVEKVLDYIRRWIPERGAGLLAGSSVHADMRFML 123
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQK-------HRALDDIRESIM 233
MP++ S+ ++DVSS+K +C RWYP KV ++EQ+ HRALDDIR SI
Sbjct: 124 MGMPEVMKHLSYRILDVSSVKEICRRWYP----KVRAQEQESRTTECSHRALDDIRASIQ 179
Query: 234 ELKYYKENIF 243
ELK+Y++NIF
Sbjct: 180 ELKFYRDNIF 189
>gi|366157935|ref|ZP_09457797.1| oligoribonuclease [Escherichia sp. TW09308]
gi|432374735|ref|ZP_19617760.1| oligoribonuclease [Escherichia coli KTE11]
gi|430892874|gb|ELC15358.1| oligoribonuclease [Escherichia coli KTE11]
Length = 181
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|401678414|ref|ZP_10810378.1| oligoribonuclease [Enterobacter sp. SST3]
gi|400214355|gb|EJO45277.1| oligoribonuclease [Enterobacter sp. SST3]
Length = 181
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ + L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELSYYRENFIK 180
>gi|300859054|ref|YP_003784037.1| hypothetical protein cpfrc_01637 [Corynebacterium
pseudotuberculosis FRC41]
gi|383314812|ref|YP_005375667.1| oligoribonuclease [Corynebacterium pseudotuberculosis P54B96]
gi|384505225|ref|YP_005681895.1| oligoribonuclease [Corynebacterium pseudotuberculosis 1002]
gi|384507328|ref|YP_005683997.1| oligoribonuclease [Corynebacterium pseudotuberculosis C231]
gi|384509417|ref|YP_005686085.1| oligoribonuclease [Corynebacterium pseudotuberculosis I19]
gi|384511501|ref|YP_005691079.1| oligoribonuclease [Corynebacterium pseudotuberculosis PAT10]
gi|385808113|ref|YP_005844510.1| oligoribonuclease [Corynebacterium pseudotuberculosis 267]
gi|300686508|gb|ADK29430.1| hypothetical protein cpfrc_01637 [Corynebacterium
pseudotuberculosis FRC41]
gi|302206756|gb|ADL11098.1| Oligoribonuclease [Corynebacterium pseudotuberculosis C231]
gi|302331309|gb|ADL21503.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 1002]
gi|308277000|gb|ADO26899.1| Oligoribonuclease [Corynebacterium pseudotuberculosis I19]
gi|341825440|gb|AEK92961.1| Oligoribonuclease [Corynebacterium pseudotuberculosis PAT10]
gi|380870313|gb|AFF22787.1| Oligoribonuclease [Corynebacterium pseudotuberculosis P54B96]
gi|383805506|gb|AFH52585.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 267]
Length = 219
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 114/197 (57%), Gaps = 6/197 (3%)
Query: 52 TLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVI 111
TLEN S TP + + LVWIDLEMTGL I+E+A +ITD L EG DLV+
Sbjct: 7 TLENM--SDTPAKNDR---LVWIDLEMTGLDTHRHVIVEVAALITDADLNILGEGVDLVV 61
Query: 112 HQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGN 170
H T L M ++ HE SGLT+++ S ++ EAE V+E + K+ P LAGN
Sbjct: 62 HATDAQLAEMDDYVTAMHENSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAGN 121
Query: 171 SVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRE 230
S+ D F+ YMP L + + +VDVSS+K L RW PR Y P K HRAL DI E
Sbjct: 122 SIATDRSFINAYMPRLDNALHYRMVDVSSVKELARRWAPRVYFNQPQKGMAHRALADIIE 181
Query: 231 SIMELKYYKENIFKTNL 247
SI EL YY+ +FK +L
Sbjct: 182 SIRELAYYRRALFKEDL 198
>gi|315125481|ref|YP_004067484.1| oligoribonuclease [Pseudoalteromonas sp. SM9913]
gi|359439595|ref|ZP_09229540.1| oligoribonuclease [Pseudoalteromonas sp. BSi20311]
gi|315013994|gb|ADT67332.1| oligoribonuclease [Pseudoalteromonas sp. SM9913]
gi|358025705|dbj|GAA65789.1| oligoribonuclease [Pseudoalteromonas sp. BSi20311]
Length = 181
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ+ E LD M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSDELLDGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A +Q + F+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTFDEAYAVEQTLAFLKQWVPAGASPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P +V +K+ H ALDDI++SIMELK Y+E F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPDVLAQV-NKKGSHLALDDIKDSIMELKVYREKFF 179
>gi|386846144|ref|YP_006264157.1| oligoribonuclease [Actinoplanes sp. SE50/110]
gi|359833648|gb|AEV82089.1| oligoribonuclease [Actinoplanes sp. SE50/110]
Length = 191
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 72 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEA 131
+WID EMTGL + D+++E+A ++TD L +G DLVIH LD+M ++ H
Sbjct: 1 MWIDCEMTGLDLGKDKLIEVAALVTDPDLNVLGDGVDLVIHADDAALDAMPPVVRDMHAK 60
Query: 132 SGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S LT EAE+Q++ +VK++V T L GNS+ D FL + MP L +
Sbjct: 61 SGLTEEVRRSVLTMAEAEEQILAYVKEHVPNPRTAPLCGNSIATDRGFLARDMPALDAHL 120
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RW+PR Y P+K HRAL DIRESI EL+YY+ +F
Sbjct: 121 HYRMIDVSSIKELCRRWFPRVYFGQPAKGLSHRALADIRESIRELEYYRRTVF 173
>gi|359427902|ref|ZP_09218945.1| oligoribonuclease [Acinetobacter sp. NBRC 100985]
gi|358236564|dbj|GAB00484.1| oligoribonuclease [Acinetobacter sp. NBRC 100985]
Length = 187
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIITDDNLNILAEGPVLAVHQSDLILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L+ +AE+Q +EF+KK V + + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLSALDAEQQTLEFLKKWVNPKSSPMCGNSICQDRRFLHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 249
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N K
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIMNHDK 186
>gi|340793758|ref|YP_004759221.1| hypothetical protein CVAR_0795 [Corynebacterium variabile DSM
44702]
gi|340533668|gb|AEK36148.1| hypothetical protein CVAR_0795 [Corynebacterium variabile DSM
44702]
Length = 209
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 114/185 (61%), Gaps = 3/185 (1%)
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
TP + LVW+D EMTGL ++EIA ++TD +L EG D+VIH T++ L
Sbjct: 2 TPNQIAKTDRLVWVDCEMTGLDTSRHVLVEIAVVVTDAELKPLDEGIDIVIHATEDELAE 61
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT--YTPLLAGNSVYVDFMF 178
M ++ N H +SGLT ++ S ++ +AEK+VVE++++ V + PL GNS+ D F
Sbjct: 62 MDDFVTNMHGSSGLTDEIRASSVSVADAEKRVVEYIRRFVASSGVAPL-CGNSIASDRKF 120
Query: 179 LKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYY 238
+ KYMPDL + + ++DVSSIK L RWYPR Y P K +HRAL DI ESI EL YY
Sbjct: 121 IAKYMPDLDNFLHYRMIDVSSIKELTRRWYPRVYSGQPEKGMQHRALADILESIRELDYY 180
Query: 239 KENIF 243
+ F
Sbjct: 181 RRAAF 185
>gi|377566273|ref|ZP_09795534.1| oligoribonuclease [Gordonia sputi NBRC 100414]
gi|377526527|dbj|GAB40699.1| oligoribonuclease [Gordonia sputi NBRC 100414]
Length = 199
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL +E D+++EIA ++TD L +G D+VIH LD+M + H
Sbjct: 5 LVWIDCEMTGLDLEKDKLIEIAALVTDSDLNILGDGVDVVIHADDADLDAMPDVVTKMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE V+++++ +V T + LAGNS+ D F+ + MP+L +
Sbjct: 65 DSGLTDEVRRSAITVPEAEAMVLDYIRAHVTTSGAVPLAGNSIATDRGFIARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSIKELTRRWYPRVYFNQPEKGLAHRALADIRESIRELRYYRAAAF 178
>gi|296100932|ref|YP_003611078.1| oligoribonuclease [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|392977274|ref|YP_006475862.1| oligoribonuclease [Enterobacter cloacae subsp. dissolvens SDM]
gi|295055391|gb|ADF60129.1| oligoribonuclease [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|392323207|gb|AFM58160.1| oligoribonuclease [Enterobacter cloacae subsp. dissolvens SDM]
Length = 181
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ + L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|387890850|ref|YP_006321148.1| oligoribonuclease [Escherichia blattae DSM 4481]
gi|414594035|ref|ZP_11443675.1| oligoribonuclease [Escherichia blattae NBRC 105725]
gi|386925683|gb|AFJ48637.1| oligoribonuclease [Escherichia blattae DSM 4481]
gi|403194959|dbj|GAB81327.1| oligoribonuclease [Escherichia blattae NBRC 105725]
Length = 181
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD +L EGP + +HQ+ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDAQLNLLAEGPVIAVHQSDAQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L EREAE +EF+K+ V + GNSV D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASPLGEREAELATLEFLKQWVPEGKSPICGNSVGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTVKELARRWKPEILAGF-KKQGTHQALDDIRESVAELAYYRENFIK 180
>gi|258620689|ref|ZP_05715724.1| oligoribonuclease [Vibrio mimicus VM573]
gi|424811013|ref|ZP_18236344.1| oligoribonuclease [Vibrio mimicus SX-4]
gi|258586887|gb|EEW11601.1| oligoribonuclease [Vibrio mimicus VM573]
gi|342321895|gb|EGU17692.1| oligoribonuclease [Vibrio mimicus SX-4]
Length = 181
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP +VIHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIVIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL ++MP L + F
Sbjct: 68 ASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYRHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ IFK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKTIFK 180
>gi|424863879|ref|ZP_18287791.1| oligoribonuclease [SAR86 cluster bacterium SAR86A]
gi|400757200|gb|EJP71412.1| oligoribonuclease [SAR86 cluster bacterium SAR86A]
Length = 182
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 111/170 (65%), Gaps = 2/170 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E ++I+EIA ++TD L EGP+LVI Q E L+SM EW HH
Sbjct: 10 LVWIDLEMTGLDPEKEKIIEIATLVTDSDLHIIAEGPNLVISQPNEILESMDEWNLTHHG 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++V S +TE+ AE + +EF+ K VG + GN+V D FL KYMP L S F
Sbjct: 70 SSGLIEEVKKSDVTEQIAEIETLEFISKYVGEKVSPMCGNTVSHDRRFLSKYMPRLESYF 129
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
++ +DVSS K +RW + +V K+ HRAL DI+ES+ ELK+YK+
Sbjct: 130 NYRHIDVSSFKETAVRWM--NEAQVYEKKGSHRALGDIKESVEELKFYKQ 177
>gi|387139209|ref|YP_005695188.1| oligoribonuclease [Corynebacterium pseudotuberculosis CIP 52.97]
gi|349735687|gb|AEQ07165.1| Oligoribonuclease [Corynebacterium pseudotuberculosis CIP 52.97]
Length = 219
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 114/197 (57%), Gaps = 6/197 (3%)
Query: 52 TLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVI 111
TLEN S TP + + LVWIDLEMTGL I+E+A +ITD L EG DLV+
Sbjct: 7 TLENM--SDTPAKNDR---LVWIDLEMTGLDTHRHVIVEVAALITDADLNILGEGVDLVV 61
Query: 112 HQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGN 170
H T L M ++ HE SGLT+++ S ++ EAE V+E + K+ P LAGN
Sbjct: 62 HATDAQLAEMDDYVTAMHENSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAGN 121
Query: 171 SVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRE 230
S+ D F+ YMP L + + +VDVSS+K L RW PR Y P K HRAL DI E
Sbjct: 122 SIATDRSFINAYMPRLDNALHYRMVDVSSVKELARRWAPRVYFNQPQKGMAHRALADIIE 181
Query: 231 SIMELKYYKENIFKTNL 247
SI EL YY+ +FK +L
Sbjct: 182 SIRELAYYRRALFKEDL 198
>gi|312068745|ref|XP_003137358.1| smfn protein [Loa loa]
gi|307767487|gb|EFO26721.1| smfn protein [Loa loa]
Length = 186
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 111/173 (64%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++W+D EMTGL + I+EIAC+IT+ LT EG +L+I Q K+ L+ M +WC+
Sbjct: 10 IIWMDCEMTGLDVTSKTIVEIACVITEPDLTIVEEGLNLIISQPKDVLEGMDDWCKATFT 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
++GL +++ S +T ++AE +++ +V+++ L GNSV D +FL+KYMP L
Sbjct: 70 SNGLLQEIRSSKITVQQAENEILTYVRQHTDPGMCPLGGNSVGSDRIFLQKYMPTLEKHL 129
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSSIK L RWYP Y + P K HRAL DI ESI EL +YK+NIF
Sbjct: 130 HYRNIDVSSIKELAKRWYPYIYARKPRKANTHRALGDIHESIQELNWYKKNIF 182
>gi|392953599|ref|ZP_10319153.1| oligoribonuclease [Hydrocarboniphaga effusa AP103]
gi|391859114|gb|EIT69643.1| oligoribonuclease [Hydrocarboniphaga effusa AP103]
Length = 184
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E RI+EIA I+TD L EGP + +HQ++E L +M +W H
Sbjct: 8 LIWIDLEMTGLIPERHRIIEIATIVTDVHLNILAEGPVIAVHQSEEELAAMDDWNTRQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+V S TE EAE + ++F+K+ + GNS+ D FL +YMP L F
Sbjct: 68 GSGLAKRVRESHSTEAEAEARTIDFLKQWAVPGRSPMCGNSICQDRRFLARYMPALERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +DVS++K LC RW P R SKE H AL+DIR+SI EL+YY+++ + +
Sbjct: 128 HYRNLDVSTVKELCQRWTPEIARGF-SKESSHLALNDIRDSITELRYYRQHFLRVPM 183
>gi|119469142|ref|ZP_01612126.1| oligoribonuclease [Alteromonadales bacterium TW-7]
gi|119447394|gb|EAW28662.1| oligoribonuclease [Alteromonadales bacterium TW-7]
Length = 181
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ D+ILEIA ++TD L EGP + IHQ+ E L+ M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPATDKILEIATVVTDADLNILAEGPTIAIHQSDELLNGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A Q +EF+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASAFDEEYAVAQTLEFLKQWVPAGASPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P +V +K+ H ALDDI++SIMELK Y+E F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLAQV-NKKGSHLALDDIKDSIMELKVYREKFF 179
>gi|449471146|ref|XP_004153221.1| PREDICTED: oligoribonuclease-like [Cucumis sativus]
Length = 232
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 111/177 (62%), Gaps = 4/177 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ + L M EW H
Sbjct: 56 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDEWNVRTHT 115
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPL--LAGNSVYVDFMFLKKYMPDLA 187
SGL ++V S L +REAE +EF+K+ V +P+ + GNS+ D FL KYMP+L
Sbjct: 116 GSGLVERVKASTLGDREAELATIEFLKQWVPAGKSPICPICGNSIGQDRRFLFKYMPELE 175
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
S F + +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 176 SYFHYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYRENFIK 231
>gi|225021633|ref|ZP_03710825.1| hypothetical protein CORMATOL_01658 [Corynebacterium matruchotii
ATCC 33806]
gi|224945624|gb|EEG26833.1| hypothetical protein CORMATOL_01658 [Corynebacterium matruchotii
ATCC 33806]
Length = 209
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWIDLEMTGL I I+E+A +ITD L EG D+V+H ++E L M E+ N HE
Sbjct: 10 IVWIDLEMTGLDIHEHTIVEVAALITDADLNVLGEGVDVVVHASEEELRRMNEFVTNMHE 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
+SGL ++ S +T +EAE V+E + K+ + P LAGNS+ D F+++YMP L
Sbjct: 70 SSGLLAEIQESTVTLKEAEDAVLELIAKHCDSEHPAPLAGNSIGTDRGFIREYMPRLDEA 129
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS++K L RW PR Y P K+ HRAL DI ESI EL +Y+ +F N
Sbjct: 130 LHYRMIDVSTVKELARRWAPRVYYHQPEKDMSHRALADIVESIRELDFYRRVLFVAN 186
>gi|209921653|ref|YP_002295737.1| oligoribonuclease [Escherichia coli SE11]
gi|416343324|ref|ZP_11677328.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli EC4100B]
gi|419348046|ref|ZP_13889404.1| oligoribonuclease monomer [Escherichia coli DEC13A]
gi|419352493|ref|ZP_13893814.1| oligoribonuclease monomer [Escherichia coli DEC13B]
gi|419358021|ref|ZP_13899258.1| oligoribonuclease monomer [Escherichia coli DEC13C]
gi|419362985|ref|ZP_13904184.1| oligoribonuclease monomer [Escherichia coli DEC13D]
gi|419368082|ref|ZP_13909220.1| oligoribonuclease monomer [Escherichia coli DEC13E]
gi|432811910|ref|ZP_20045762.1| oligoribonuclease [Escherichia coli KTE101]
gi|433094561|ref|ZP_20280802.1| oligoribonuclease [Escherichia coli KTE138]
gi|209914912|dbj|BAG79986.1| oligoribonuclease [Escherichia coli SE11]
gi|320200705|gb|EFW75291.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli EC4100B]
gi|378181112|gb|EHX41787.1| oligoribonuclease monomer [Escherichia coli DEC13A]
gi|378194123|gb|EHX54639.1| oligoribonuclease monomer [Escherichia coli DEC13C]
gi|378195048|gb|EHX55556.1| oligoribonuclease monomer [Escherichia coli DEC13B]
gi|378196316|gb|EHX56803.1| oligoribonuclease monomer [Escherichia coli DEC13D]
gi|378207448|gb|EHX67841.1| oligoribonuclease monomer [Escherichia coli DEC13E]
gi|431358666|gb|ELG45317.1| oligoribonuclease [Escherichia coli KTE101]
gi|431605292|gb|ELI74683.1| oligoribonuclease [Escherichia coli KTE138]
Length = 181
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILNGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|403053073|ref|ZP_10907557.1| oligoribonuclease [Acinetobacter bereziniae LMG 1003]
Length = 185
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA I+TD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIVTDDHLNILAEGPVLAVHQSDIILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V + + GNS+ D F+ + MP+L F
Sbjct: 69 QSGLIERVRRSKLTAQDAEQQTLEFLKKWVSPKSSPMCGNSICQDRRFMHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY++ F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYRQYFFIEN 183
>gi|406036820|ref|ZP_11044184.1| oligoribonuclease [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 184
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA I+TD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIVTDDHLNILAEGPVLAVHQSDLILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++ E+Q +EF+KK V + + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLTAQDVEQQTLEFLKKWVNPKSSPMCGNSICQDRRFLHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIMN 183
>gi|187924944|ref|YP_001896586.1| oligoribonuclease [Burkholderia phytofirmans PsJN]
gi|187716138|gb|ACD17362.1| Exonuclease RNase T and DNA polymerase III [Burkholderia
phytofirmans PsJN]
Length = 203
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 113/186 (60%), Gaps = 1/186 (0%)
Query: 58 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKEC 117
+++ P M LVW+D+EMTGL+ + DRI+EIA ++T+ L + VEGP L IHQ+ E
Sbjct: 7 STEQPSLVRSDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDET 66
Query: 118 LDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFM 177
L M +W QN H SGL +V S ++E +A +Q+ +F+ V + GNS+ D
Sbjct: 67 LAKMDQWNQNTHGRSGLIDRVKASTVSEADAAEQIRDFLSVFVPPGKSPMCGNSICQDRR 126
Query: 178 FLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKY 237
F+ ++MPDL F + +DVS++K LC RW P Y+ K H AL DI ESI ELKY
Sbjct: 127 FMARWMPDLERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKY 185
Query: 238 YKENIF 243
Y+E+
Sbjct: 186 YREHFL 191
>gi|304414192|ref|ZP_07395560.1| oligoribonuclease (3'->5' exoribonuclease) [Candidatus Regiella
insecticola LSR1]
gi|304283406|gb|EFL91802.1| oligoribonuclease (3'->5' exoribonuclease) [Candidatus Regiella
insecticola LSR1]
Length = 181
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 66 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWC 125
E K L+WIDLEMTGL E DRI+EIA ++TD L EGP + IHQ+ E L M EW
Sbjct: 3 EIKNNLIWIDLEMTGLYPEHDRIIEIATLVTDANLNLLEEGPVIAIHQSDETLSLMDEWN 62
Query: 126 QNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPD 185
H SGL ++ +S E AEKQ +EF+KK V + GNSV D FL +YMP+
Sbjct: 63 TRTHNDSGLVNRIKNSTTDEAAAEKQTIEFLKKYVPQGVSPICGNSVGQDRRFLFRYMPE 122
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
L F + +DVS++K L RW P + K +K H+A+DDIRES+ EL YY+++ +
Sbjct: 123 LEKYFHYRYLDVSTLKELARRWKP-EILKGFTKNNTHKAMDDIRESVAELVYYRQHFIQ 180
>gi|343502526|ref|ZP_08740376.1| oligoribonuclease [Vibrio tubiashii ATCC 19109]
gi|418479222|ref|ZP_13048312.1| oligoribonuclease [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342814251|gb|EGU49199.1| oligoribonuclease [Vibrio tubiashii ATCC 19109]
gi|384573147|gb|EIF03644.1| oligoribonuclease [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 181
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +++EIA I+TD +L EGP L IHQ +E L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKVIEIATIVTDSELNILAEGPVLAIHQPEEELVKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+V S + E+EA +Q +EF++K V + GNSV D FL K+M +L F
Sbjct: 68 GSGLVKRVRESKIDEQEAIRQTIEFLEKWVPKGKSPICGNSVGQDRRFLYKHMAELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SK H ALDDIRESI EL+YY++ IF
Sbjct: 128 HYRYIDVSTLKELTRRWKPEVLDGF-SKTGSHLALDDIRESIAELQYYRKTIF 179
>gi|149377531|ref|ZP_01895272.1| oligoribonuclease [Marinobacter algicola DG893]
gi|149358223|gb|EDM46704.1| oligoribonuclease [Marinobacter algicola DG893]
Length = 180
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E +RI+EIA I+TD L EGP + +HQ+ + L M EWC H
Sbjct: 7 LVWIDLEMTGLDPEKERIIEIATIVTDSDLNTIEEGPVIAVHQSDKLLSEMDEWCTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S E +AE++ +EF+++ + L GNS+ D FL KYMP+L + F
Sbjct: 67 ESGLTQRVKDSKYGEIDAEQKTLEFLQRYLEPGQSPLCGNSIGQDRRFLVKYMPELEAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P D K+ H ALDDIR+SI EL++Y+E+ F+
Sbjct: 127 HYRNLDVSTIKELARRWRP-DVLDGVKKKGSHLALDDIRDSIEELRHYREHFFQ 179
>gi|417631676|ref|ZP_12281902.1| exonuclease family protein [Escherichia coli STEC_MHI813]
gi|345367827|gb|EGW99833.1| exonuclease family protein [Escherichia coli STEC_MHI813]
Length = 181
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKESTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|218551434|ref|YP_002385226.1| oligoribonuclease [Escherichia fergusonii ATCC 35469]
gi|422807064|ref|ZP_16855495.1| exonuclease [Escherichia fergusonii B253]
gi|218358976|emb|CAQ91636.1| oligoribonuclease [Escherichia fergusonii ATCC 35469]
gi|324112239|gb|EGC06217.1| exonuclease [Escherichia fergusonii B253]
Length = 181
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAMMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|402759179|ref|ZP_10861435.1| oligoribonuclease [Acinetobacter sp. NCTC 7422]
Length = 186
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIITDDHLNILAEGPVLAVHQSDLILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L +AE+Q +EF+KK V + + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLKAEDAEQQTLEFLKKWVSPKSSPMCGNSICQDRRFLHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYREYFFIMN 183
>gi|291327132|ref|ZP_06127108.2| oligoribonuclease [Providencia rettgeri DSM 1131]
gi|291311676|gb|EFE52129.1| oligoribonuclease [Providencia rettgeri DSM 1131]
Length = 187
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA I+TD L EGP + +HQT E L M EW N H
Sbjct: 14 LIWIDLEMTGLDPVRDRIIEIATIVTDSHLNILAEGPVIAVHQTDEQLALMDEWNVNTHT 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++EREAE + F++K V + GNSV D FL YMP+L S F
Sbjct: 74 NSGLVERVRKSTVSEREAELATIAFLEKWVPQGASPICGNSVGQDRRFLFNYMPELESYF 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+ALDDIRES+ EL YY+E K
Sbjct: 134 HYRYLDVSTLKELARRWKPEILAGF-TKKNTHQALDDIRESVAELAYYRETFIK 186
>gi|238793401|ref|ZP_04637027.1| Oligoribonuclease [Yersinia intermedia ATCC 29909]
gi|238727370|gb|EEQ18898.1| Oligoribonuclease [Yersinia intermedia ATCC 29909]
Length = 181
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++ +AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFSDSDAELQTIEFLKQWVPAGASPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P +P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYLDVSTLKELARRWKP---EILPGFKKQNTHQALDDIRESVAELAYYREHFIQS 181
>gi|254489693|ref|ZP_05102889.1| exonuclease superfamily [Methylophaga thiooxidans DMS010]
gi|224465102|gb|EEF81355.1| exonuclease superfamily [Methylophaga thiooxydans DMS010]
Length = 185
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL D I+EIA I+TD KL EGP IHQ LDSM EW H
Sbjct: 8 LIWIDLEMTGLDTNNDYIIEIATIVTDAKLNVLAEGPIFAIHQQDAILDSMDEWNTRQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +TE EAE++ +EF++K V + GNS+ D FL + MP+L + F
Sbjct: 68 KSGLTQRVKDSTVTEAEAEQKTIEFLRKYVPAGVSPMCGNSICQDRRFLARCMPELEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSS+K L RW P+ K K H A+DD+++SI EL++Y+E K
Sbjct: 128 HYRNLDVSSLKELARRWAPK-VEKSFKKSASHLAMDDVKDSIRELEHYRELFIK 180
>gi|161984789|ref|YP_410541.2| oligoribonuclease [Shigella boydii Sb227]
gi|416293171|ref|ZP_11650358.1| 3'-to-5' oligoribonuclease (orn) [Shigella flexneri CDC 796-83]
gi|416303328|ref|ZP_11653556.1| 3'-to-5' oligoribonuclease (orn) [Shigella flexneri CDC 796-83]
gi|417685015|ref|ZP_12334345.1| exonuclease family protein [Shigella boydii 3594-74]
gi|420328565|ref|ZP_14830294.1| oligoribonuclease [Shigella flexneri CCH060]
gi|420355971|ref|ZP_14857018.1| oligoribonuclease [Shigella boydii 4444-74]
gi|421685646|ref|ZP_16125417.1| oligoribonuclease monomer [Shigella flexneri 1485-80]
gi|320183731|gb|EFW58568.1| 3'-to-5' oligoribonuclease (orn) [Shigella flexneri CDC 796-83]
gi|320187043|gb|EFW61754.1| 3'-to-5' oligoribonuclease (orn) [Shigella flexneri CDC 796-83]
gi|332087020|gb|EGI92154.1| exonuclease family protein [Shigella boydii 3594-74]
gi|391243807|gb|EIQ03098.1| oligoribonuclease [Shigella flexneri CCH060]
gi|391269706|gb|EIQ28605.1| oligoribonuclease [Shigella boydii 4444-74]
gi|404334542|gb|EJZ61023.1| oligoribonuclease monomer [Shigella flexneri 1485-80]
Length = 181
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDSF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|419913042|ref|ZP_14431487.1| oligoribonuclease [Escherichia coli KD1]
gi|432800111|ref|ZP_20034109.1| oligoribonuclease [Escherichia coli KTE84]
gi|388390298|gb|EIL51790.1| oligoribonuclease [Escherichia coli KD1]
gi|431352967|gb|ELG39726.1| oligoribonuclease [Escherichia coli KTE84]
Length = 181
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSNEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|212555139|gb|ACJ27593.1| Exonuclease [Shewanella piezotolerans WP3]
Length = 181
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ VDRI+EIA I+TD +L +GP + IHQT E L M +W Q HH
Sbjct: 8 LIWVDLEMTGLEPAVDRIIEIATIVTDKELNIIAQGPVIAIHQTDEQLALMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +E +A Q +EF+ + V + GNS+ D FL +YMP L F
Sbjct: 68 ESGLVERVKASQFSEEDAIAQTIEFLSQYVPAGASPMCGNSIGQDRRFLNRYMPALEDFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+AL DI+ESI EL++Y+ +FK
Sbjct: 128 HYRNIDVSTVKELVRRWEPSAMEGF-TKQNTHQALLDIQESIAELQFYRAKVFK 180
>gi|323491900|ref|ZP_08097072.1| oligoribonuclease [Vibrio brasiliensis LMG 20546]
gi|323313843|gb|EGA66935.1| oligoribonuclease [Vibrio brasiliensis LMG 20546]
Length = 181
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +++EIA I+TD +L EGP L IHQ +E L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKVIEIATIVTDSELNILAEGPVLAIHQPEEELQKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++ S + E+EA +Q +EF++K V + GNSV D FL K+MP+L F
Sbjct: 68 GSGLVDRIRESKIDEQEAIRQTIEFLEKWVPKGKSPICGNSVGQDRRFLYKHMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SK+ H ALDDIRESI EL+YY+ I
Sbjct: 128 HYRYIDVSTLKELTRRWKPEVLDGF-SKKGSHLALDDIRESIAELQYYRNTII 179
>gi|170766878|ref|ZP_02901331.1| oligoribonuclease [Escherichia albertii TW07627]
gi|415775928|ref|ZP_11487612.1| exonuclease family protein [Escherichia coli 3431]
gi|170124316|gb|EDS93247.1| oligoribonuclease [Escherichia albertii TW07627]
gi|315617577|gb|EFU98183.1| exonuclease family protein [Escherichia coli 3431]
Length = 181
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|406938804|gb|EKD71955.1| hypothetical protein ACD_46C00048G0001 [uncultured bacterium]
Length = 183
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+EIA ++TD L EGP L IH + + L M EWC N H
Sbjct: 8 LIWIDLEMTGLDPDADRIIEIATVVTDKHLNVLAEGPVLAIHHSDKILSKMDEWCVNQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGLT +V S +T +AEK +EF+++ V + GNS+ D FL YMPDL F
Sbjct: 68 SSGLTDRVKKSKITTSKAEKLTLEFLREYVPESKSPMCGNSICQDRRFLYNYMPDLEKYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ DVS +K + RWYP + K +K+ KH+AL DI +SI E+KYY +N+
Sbjct: 128 HYRNFDVSVLKIIAKRWYP-NVAKGANKKTKHQALSDIYDSIDEMKYYIKNLM 179
>gi|393222653|gb|EJD08137.1| ribonuclease H-like protein [Fomitiporia mediterranea MF3/22]
Length = 227
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 110/181 (60%), Gaps = 11/181 (6%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWIDLEMTGL D I+EIA IITDG LT +G + V+ +E LD M EWC H
Sbjct: 32 PLVWIDLEMTGLDARTDDIMEIAVIITDGNLTPVDDGIEYVVKVDRERLDRMDEWCTRQH 91
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP-----LLAGNSVYVDFMFLKKYMP 184
++GLT+ L S T E V+++V+K Y P +LAGNSV+VD MFL + MP
Sbjct: 92 GSTGLTQACLASSNTLSSVESMVLDYVQK----YIPERKVGVLAGNSVHVDRMFLSERMP 147
Query: 185 DLAS-LFSHVLVDVSSIKALCMRWYPRDYR-KVPSKEQKHRALDDIRESIMELKYYKENI 242
L L DVSSIK LC RWY + S+ HRALDDIR SI EL++Y+E+I
Sbjct: 148 RLLEYLHYRTSKDVSSIKELCRRWYNGSVAPPMVSENNAHRALDDIRGSIKELQWYREHI 207
Query: 243 F 243
F
Sbjct: 208 F 208
>gi|288923313|ref|ZP_06417448.1| Exonuclease RNase T and DNA polymerase III [Frankia sp. EUN1f]
gi|288345349|gb|EFC79743.1| Exonuclease RNase T and DNA polymerase III [Frankia sp. EUN1f]
Length = 210
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D +LE+AC++TD +L EG DLV+ LD M + HE
Sbjct: 16 LVWIDCEMTGLDAGSDLLLEVACLVTDSELNVLDEGIDLVLGAPDAALDQMLPVVKEMHE 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
ASGLT V S L EAEKQ++ ++++ V + L GNS+ D F+ +Y+P L
Sbjct: 76 ASGLTTAVRASELKVDEAEKQLLAYIRRFVPDSRKAPLCGNSIATDRTFIARYLPQLDEF 135
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DI+ESI EL+YY+E +F
Sbjct: 136 LHYRMIDVSSIKELARRWYPRAYYAAPVKAGGHRALADIQESIEELRYYREILF 189
>gi|392555859|ref|ZP_10302996.1| oligoribonuclease [Pseudoalteromonas undina NCIMB 2128]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ+ E LD M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSDELLDGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A +Q + F+K+ V + GNS+ D F+ +YM +L
Sbjct: 65 QHGKSGLTARCKASTFDEAYAVEQTLAFLKQWVPAGASPMCGNSIGQDRRFMNRYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P +V +K+ H ALDDI++SIMELK Y+E F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPDVLAQV-NKKGSHLALDDIKDSIMELKVYREKFF 179
>gi|194434740|ref|ZP_03066992.1| oligoribonuclease [Shigella dysenteriae 1012]
gi|416282946|ref|ZP_11646586.1| 3'-to-5' oligoribonuclease (orn) [Shigella boydii ATCC 9905]
gi|417675545|ref|ZP_12324964.1| exonuclease family protein [Shigella dysenteriae 155-74]
gi|420350077|ref|ZP_14851437.1| oligoribonuclease [Shigella boydii 965-58]
gi|194417021|gb|EDX33138.1| oligoribonuclease [Shigella dysenteriae 1012]
gi|320180678|gb|EFW55605.1| 3'-to-5' oligoribonuclease (orn) [Shigella boydii ATCC 9905]
gi|332083629|gb|EGI88847.1| exonuclease family protein [Shigella dysenteriae 155-74]
gi|391263677|gb|EIQ22678.1| oligoribonuclease [Shigella boydii 965-58]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E+DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPELDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELVTLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|418039931|ref|ZP_12678184.1| exonuclease [Escherichia coli W26]
gi|418959946|ref|ZP_13511842.1| exonuclease [Escherichia coli J53]
gi|419803207|ref|ZP_14328379.1| exonuclease [Escherichia coli AI27]
gi|424818680|ref|ZP_18243831.1| hypothetical protein ECD227_3797 [Escherichia fergusonii ECD227]
gi|325499700|gb|EGC97559.1| hypothetical protein ECD227_3797 [Escherichia fergusonii ECD227]
gi|383477228|gb|EID69154.1| exonuclease [Escherichia coli W26]
gi|384377287|gb|EIE35182.1| exonuclease [Escherichia coli J53]
gi|384473625|gb|EIE57664.1| exonuclease [Escherichia coli AI27]
Length = 185
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 12 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 72 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 132 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 184
>gi|238796040|ref|ZP_04639551.1| Oligoribonuclease [Yersinia mollaretii ATCC 43969]
gi|238719985|gb|EEQ11790.1| Oligoribonuclease [Yersinia mollaretii ATCC 43969]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++ +AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFSDHDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>gi|445425948|ref|ZP_21437448.1| oligoribonuclease [Acinetobacter sp. WC-743]
gi|444753126|gb|ELW77792.1| oligoribonuclease [Acinetobacter sp. WC-743]
Length = 185
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA I+TD L EGP L +HQ+ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDKIIEIATIVTDDHLNILAEGPVLAVHQSDIILNAMDEWNTKQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT ++AE+Q +EF+KK V + + GNS+ D F+ + MP+L F
Sbjct: 69 QSGLIERVRRSKLTAQDAEQQTLEFLKKWVSPKSSPMCGNSICQDRRFMHRLMPELEQFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY++ F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSIAELKYYRQYFFIEN 183
>gi|332305263|ref|YP_004433114.1| Exonuclease RNase T and DNA polymerase III [Glaciecola sp.
4H-3-7+YE-5]
gi|410642419|ref|ZP_11352931.1| oligoribonuclease [Glaciecola chathamensis S18K6]
gi|410644598|ref|ZP_11355074.1| oligoribonuclease [Glaciecola agarilytica NO2]
gi|332172592|gb|AEE21846.1| Exonuclease RNase T and DNA polymerase III [Glaciecola sp.
4H-3-7+YE-5]
gi|410135772|dbj|GAC03473.1| oligoribonuclease [Glaciecola agarilytica NO2]
gi|410138091|dbj|GAC11118.1| oligoribonuclease [Glaciecola chathamensis S18K6]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL EVD +LEIA I+TD L EGP L IHQ+ E L++M +WC + H
Sbjct: 8 LVWIDMEMTGLHPEVDVVLEIATIVTDANLNILAEGPVLAIHQSDEVLNNMNQWCIDTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++ S + E+ A + + F++K V L GN++ D F+ KYMP+L F
Sbjct: 68 KSGLTERCRKSTIDEQTAVAETIRFLEKYVPKGASPLCGNTIGQDRRFMVKYMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SK+ H ALDDIRESI EL YY+++IF
Sbjct: 128 HYRNIDVSTLKELVKRWKPEVLDGF-SKKGVHLALDDIRESIAELVYYRQHIF 179
>gi|419145302|ref|ZP_13690022.1| oligoribonuclease [Escherichia coli DEC6A]
gi|419151362|ref|ZP_13696003.1| oligoribonuclease monomer [Escherichia coli DEC6B]
gi|377987126|gb|EHV50314.1| oligoribonuclease monomer [Escherichia coli DEC6B]
gi|377987799|gb|EHV50983.1| oligoribonuclease [Escherichia coli DEC6A]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELSTLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|194290291|ref|YP_002006198.1| oligoribonuclease [Cupriavidus taiwanensis LMG 19424]
gi|193224126|emb|CAQ70135.1| oligoribonuclease [Cupriavidus taiwanensis LMG 19424]
Length = 211
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL+ + DRI+E+A +ITD +L EGP LVIHQ+ LD M W + H
Sbjct: 16 LIWLDMEMTGLQPDTDRIIEVAVVITDSELNILAEGPVLVIHQSDAVLDGMDNWNKGTHG 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE +++ F+K+ V + GNS+ D F+ +YMP L + F
Sbjct: 76 RSGLIDKVKASTLTEEQAEAELLAFLKRWVPAGKSPMCGNSICQDRRFMARYMPKLEAFF 135
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P ++ K Q H AL DI ES+ EL+YY+ + +
Sbjct: 136 HYRNLDVSTLKELCKRWEPAIHKGF-VKRQLHTALADILESVEELRYYRTHFIR 188
>gi|238757512|ref|ZP_04618697.1| Oligoribonuclease [Yersinia aldovae ATCC 35236]
gi|238704274|gb|EEP96806.1| Oligoribonuclease [Yersinia aldovae ATCC 35236]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++ +AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFSDHDAELQTIEFLKQWVPAGISPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P +P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYLDVSTLKELARRWKP---EILPGFKKQNTHQALDDIRESVAELAYYREHFIQS 181
>gi|238787531|ref|ZP_04631329.1| Oligoribonuclease [Yersinia frederiksenii ATCC 33641]
gi|238724318|gb|EEQ15960.1| Oligoribonuclease [Yersinia frederiksenii ATCC 33641]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +AE Q +EF+++ V T + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFNDHDAELQTIEFLQQWVPAGTSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKP---EILPGFKKQNTHQALDDIRESVAELAYYREHFIQ 180
>gi|119502786|ref|ZP_01624871.1| oligoribonuclease [marine gamma proteobacterium HTCC2080]
gi|119461132|gb|EAW42222.1| oligoribonuclease [marine gamma proteobacterium HTCC2080]
Length = 182
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 111/175 (63%), Gaps = 2/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E R++E+A IITD L + +GP + IHQ+++ LD+M EW +HH
Sbjct: 7 LIWVDLEMTGLIPEQHRVIEMATIITDSDLNELAQGPVIAIHQSQDELDAMDEWNTSHHT 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL K+V S E A ++ + F++K V + GNS+ D F+ +++PDL + F
Sbjct: 67 ASGLVKRVCESAYDEHRATRETLAFLEKWVPAGRSPMCGNSICQDRRFMARHLPDLEAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVSS+K L RW P D + K H ALDDIRESI EL+YY++N +
Sbjct: 127 HYRNLDVSSLKILATRWRP-DLSGL-KKRNVHLALDDIRESIEELRYYRDNFLQV 179
>gi|90111697|ref|NP_418586.4| oligoribonuclease [Escherichia coli str. K-12 substr. MG1655]
gi|157155866|ref|YP_001465662.1| oligoribonuclease [Escherichia coli E24377A]
gi|157163628|ref|YP_001460946.1| oligoribonuclease [Escherichia coli HS]
gi|161486014|ref|NP_757097.2| oligoribonuclease [Escherichia coli CFT073]
gi|161949984|ref|YP_405804.2| oligoribonuclease [Shigella dysenteriae Sd197]
gi|161986383|ref|YP_313069.2| oligoribonuclease [Shigella sonnei Ss046]
gi|170021825|ref|YP_001726779.1| oligoribonuclease [Escherichia coli ATCC 8739]
gi|170083611|ref|YP_001732931.1| oligoribonuclease [Escherichia coli str. K-12 substr. DH10B]
gi|170681955|ref|YP_001746560.1| oligoribonuclease [Escherichia coli SMS-3-5]
gi|187730220|ref|YP_001882856.1| oligoribonuclease [Shigella boydii CDC 3083-94]
gi|188495936|ref|ZP_03003206.1| oligoribonuclease [Escherichia coli 53638]
gi|191165629|ref|ZP_03027469.1| oligoribonuclease [Escherichia coli B7A]
gi|193065728|ref|ZP_03046792.1| oligoribonuclease [Escherichia coli E22]
gi|194428928|ref|ZP_03061461.1| oligoribonuclease [Escherichia coli B171]
gi|194437211|ref|ZP_03069309.1| oligoribonuclease [Escherichia coli 101-1]
gi|215489509|ref|YP_002331940.1| oligoribonuclease [Escherichia coli O127:H6 str. E2348/69]
gi|218556717|ref|YP_002389631.1| oligoribonuclease [Escherichia coli IAI1]
gi|218561324|ref|YP_002394237.1| oligoribonuclease [Escherichia coli S88]
gi|218692499|ref|YP_002400711.1| oligoribonuclease [Escherichia coli ED1a]
gi|218697914|ref|YP_002405581.1| oligoribonuclease [Escherichia coli 55989]
gi|218702862|ref|YP_002410491.1| oligoribonuclease [Escherichia coli IAI39]
gi|218707776|ref|YP_002415295.1| oligoribonuclease [Escherichia coli UMN026]
gi|222158930|ref|YP_002559069.1| Oligoribonuclease [Escherichia coli LF82]
gi|229560203|ref|YP_672251.2| oligoribonuclease [Escherichia coli 536]
gi|229775946|ref|YP_859834.2| oligoribonuclease [Escherichia coli APEC O1]
gi|238903272|ref|YP_002929068.1| oligoribonuclease [Escherichia coli BW2952]
gi|251787415|ref|YP_003001719.1| oligoribonuclease monomer, subunit of oligoribonuclease
[Escherichia coli BL21(DE3)]
gi|253775210|ref|YP_003038041.1| oligoribonuclease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254164094|ref|YP_003047202.1| oligoribonuclease [Escherichia coli B str. REL606]
gi|254290844|ref|YP_003056592.1| oligoribonuclease [Escherichia coli BL21(DE3)]
gi|260846995|ref|YP_003224773.1| oligoribonuclease Orn [Escherichia coli O103:H2 str. 12009]
gi|260858318|ref|YP_003232209.1| oligoribonuclease [Escherichia coli O26:H11 str. 11368]
gi|260870927|ref|YP_003237329.1| oligoribonuclease Orn [Escherichia coli O111:H- str. 11128]
gi|293402792|ref|ZP_06646889.1| oligoribonuclease [Escherichia coli FVEC1412]
gi|293407892|ref|ZP_06651732.1| oligoribonuclease [Escherichia coli B354]
gi|293417668|ref|ZP_06660290.1| orn oligoribonuclease [Escherichia coli B185]
gi|293476475|ref|ZP_06664883.1| orn [Escherichia coli B088]
gi|297518431|ref|ZP_06936817.1| oligoribonuclease [Escherichia coli OP50]
gi|298378322|ref|ZP_06988206.1| oligoribonuclease [Escherichia coli FVEC1302]
gi|301027985|ref|ZP_07191269.1| exonuclease [Escherichia coli MS 196-1]
gi|306815620|ref|ZP_07449769.1| oligoribonuclease [Escherichia coli NC101]
gi|307312001|ref|ZP_07591638.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli W]
gi|309787669|ref|ZP_07682280.1| exonuclease family protein [Shigella dysenteriae 1617]
gi|312965838|ref|ZP_07780064.1| exonuclease family protein [Escherichia coli 2362-75]
gi|312974028|ref|ZP_07788199.1| exonuclease family protein [Escherichia coli 1827-70]
gi|331644912|ref|ZP_08346029.1| oligoribonuclease [Escherichia coli H736]
gi|331650290|ref|ZP_08351362.1| oligoribonuclease [Escherichia coli M605]
gi|331655993|ref|ZP_08356981.1| oligoribonuclease [Escherichia coli M718]
gi|331660740|ref|ZP_08361672.1| oligoribonuclease [Escherichia coli TA206]
gi|331671070|ref|ZP_08371903.1| oligoribonuclease [Escherichia coli TA271]
gi|331671316|ref|ZP_08372114.1| oligoribonuclease [Escherichia coli TA280]
gi|331680295|ref|ZP_08380954.1| oligoribonuclease [Escherichia coli H591]
gi|331681184|ref|ZP_08381821.1| oligoribonuclease [Escherichia coli H299]
gi|378714881|ref|YP_005279774.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
KO11FL]
gi|383181495|ref|YP_005459500.1| oligoribonuclease [Shigella sonnei 53G]
gi|386597319|ref|YP_006093719.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli DH1]
gi|386602228|ref|YP_006103734.1| oligoribonuclease [Escherichia coli IHE3034]
gi|386606752|ref|YP_006113052.1| oligoribonuclease [Escherichia coli UM146]
gi|386611562|ref|YP_006127048.1| oligoribonuclease [Escherichia coli W]
gi|386617072|ref|YP_006136738.1| hypothetical protein UMNK88_5100 [Escherichia coli UMNK88]
gi|386621921|ref|YP_006141501.1| 3'-to-5' oligoribonuclease [Escherichia coli NA114]
gi|386627128|ref|YP_006146856.1| oligoribonuclease [Escherichia coli O7:K1 str. CE10]
gi|386632172|ref|YP_006151892.1| oligoribonuclease [Escherichia coli str. 'clone D i2']
gi|386637092|ref|YP_006156811.1| oligoribonuclease [Escherichia coli str. 'clone D i14']
gi|386641840|ref|YP_006108638.1| oligoribonuclease [Escherichia coli ABU 83972]
gi|386702965|ref|YP_006166802.1| oligoribonuclease [Escherichia coli KO11FL]
gi|386712107|ref|YP_006175828.1| oligoribonuclease [Escherichia coli W]
gi|387610047|ref|YP_006098903.1| oligoribonuclease [Escherichia coli 042]
gi|387614934|ref|YP_006118050.1| oligoribonuclease [Escherichia coli ETEC H10407]
gi|387619553|ref|YP_006122575.1| oligoribonuclease [Escherichia coli O83:H1 str. NRG 857C]
gi|387623795|ref|YP_006131423.1| oligoribonuclease [Escherichia coli DH1]
gi|388480112|ref|YP_492307.1| oligoribonuclease [Escherichia coli str. K-12 substr. W3110]
gi|404373089|ref|ZP_10978362.1| oligoribonuclease [Escherichia sp. 1_1_43]
gi|407467211|ref|YP_006786347.1| oligoribonuclease [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407484070|ref|YP_006781220.1| oligoribonuclease [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484613|ref|YP_006772159.1| oligoribonuclease [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415784778|ref|ZP_11492555.1| exonuclease family protein [Escherichia coli EPECa14]
gi|415813698|ref|ZP_11505428.1| exonuclease family protein [Escherichia coli LT-68]
gi|415823576|ref|ZP_11511951.1| exonuclease family protein [Escherichia coli OK1180]
gi|415831997|ref|ZP_11517548.1| exonuclease family protein [Escherichia coli OK1357]
gi|415838035|ref|ZP_11520018.1| exonuclease family protein [Escherichia coli RN587/1]
gi|415848582|ref|ZP_11526217.1| exonuclease family protein [Shigella sonnei 53G]
gi|416274052|ref|ZP_11643507.1| 3'-to-5' oligoribonuclease (orn) [Shigella dysenteriae CDC 74-1112]
gi|416338933|ref|ZP_11674934.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli WV_060327]
gi|416900894|ref|ZP_11930026.1| exonuclease family protein [Escherichia coli STEC_7v]
gi|417088442|ref|ZP_11955108.1| oligoribonuclease [Escherichia coli cloneA_i1]
gi|417118273|ref|ZP_11968849.1| oligoribonuclease [Escherichia coli 1.2741]
gi|417127816|ref|ZP_11975256.1| oligoribonuclease [Escherichia coli 97.0246]
gi|417132842|ref|ZP_11977627.1| oligoribonuclease [Escherichia coli 5.0588]
gi|417139918|ref|ZP_11983265.1| oligoribonuclease [Escherichia coli 97.0259]
gi|417149575|ref|ZP_11989666.1| oligoribonuclease [Escherichia coli 1.2264]
gi|417156433|ref|ZP_11994057.1| oligoribonuclease [Escherichia coli 96.0497]
gi|417160099|ref|ZP_11997018.1| oligoribonuclease [Escherichia coli 99.0741]
gi|417173578|ref|ZP_12003374.1| oligoribonuclease [Escherichia coli 3.2608]
gi|417184709|ref|ZP_12010306.1| oligoribonuclease [Escherichia coli 93.0624]
gi|417190154|ref|ZP_12013045.1| oligoribonuclease [Escherichia coli 4.0522]
gi|417208128|ref|ZP_12020148.1| oligoribonuclease [Escherichia coli JB1-95]
gi|417225070|ref|ZP_12028361.1| oligoribonuclease [Escherichia coli 96.154]
gi|417230867|ref|ZP_12032283.1| oligoribonuclease [Escherichia coli 5.0959]
gi|417244656|ref|ZP_12038599.1| oligoribonuclease [Escherichia coli 9.0111]
gi|417252406|ref|ZP_12044165.1| oligoribonuclease [Escherichia coli 4.0967]
gi|417261100|ref|ZP_12048593.1| oligoribonuclease [Escherichia coli 2.3916]
gi|417269835|ref|ZP_12057195.1| oligoribonuclease [Escherichia coli 3.3884]
gi|417273657|ref|ZP_12061002.1| oligoribonuclease [Escherichia coli 2.4168]
gi|417278932|ref|ZP_12066245.1| oligoribonuclease [Escherichia coli 3.2303]
gi|417281417|ref|ZP_12068717.1| oligoribonuclease [Escherichia coli 3003]
gi|417287777|ref|ZP_12075063.1| oligoribonuclease [Escherichia coli TW07793]
gi|417293401|ref|ZP_12080680.1| oligoribonuclease [Escherichia coli B41]
gi|417297931|ref|ZP_12085174.1| oligoribonuclease [Escherichia coli 900105 (10e)]
gi|417310789|ref|ZP_12097593.1| Oligoribonuclease [Escherichia coli PCN033]
gi|417583837|ref|ZP_12234631.1| exonuclease family protein [Escherichia coli STEC_B2F1]
gi|417594725|ref|ZP_12245410.1| exonuclease family protein [Escherichia coli 2534-86]
gi|417599620|ref|ZP_12250237.1| exonuclease family protein [Escherichia coli 3030-1]
gi|417605143|ref|ZP_12255699.1| exonuclease family protein [Escherichia coli STEC_94C]
gi|417605666|ref|ZP_12256200.1| exonuclease family protein [Escherichia coli STEC_DG131-3]
gi|417616016|ref|ZP_12266458.1| exonuclease family protein [Escherichia coli STEC_EH250]
gi|417620874|ref|ZP_12271270.1| exonuclease family protein [Escherichia coli G58-1]
gi|417626479|ref|ZP_12276761.1| exonuclease family protein [Escherichia coli STEC_H.1.8]
gi|417632176|ref|ZP_12282400.1| exonuclease family protein [Escherichia coli STEC_S1191]
gi|417642208|ref|ZP_12292329.1| exonuclease family protein [Escherichia coli TX1999]
gi|417664833|ref|ZP_12314412.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli AA86]
gi|417669791|ref|ZP_12319320.1| exonuclease family protein [Escherichia coli STEC_O31]
gi|417758742|ref|ZP_12406796.1| oligoribonuclease monomer [Escherichia coli DEC2B]
gi|417807927|ref|ZP_12454849.1| oligoribonuclease [Escherichia coli O104:H4 str. LB226692]
gi|417835661|ref|ZP_12482097.1| oligoribonuclease [Escherichia coli O104:H4 str. 01-09591]
gi|417864731|ref|ZP_12509777.1| orn [Escherichia coli O104:H4 str. C227-11]
gi|417944530|ref|ZP_12587772.1| oligoribonuclease [Escherichia coli XH140A]
gi|417976308|ref|ZP_12617102.1| oligoribonuclease [Escherichia coli XH001]
gi|418271084|ref|ZP_12888564.1| oligoribonuclease monomer [Shigella sonnei str. Moseley]
gi|418305801|ref|ZP_12917595.1| exonuclease family protein [Escherichia coli UMNF18]
gi|418942895|ref|ZP_13496135.1| oligoribonuclease [Escherichia coli O157:H43 str. T22]
gi|418999770|ref|ZP_13547340.1| oligoribonuclease monomer [Escherichia coli DEC1A]
gi|419005101|ref|ZP_13552602.1| oligoribonuclease monomer [Escherichia coli DEC1B]
gi|419010758|ref|ZP_13558158.1| oligoribonuclease monomer [Escherichia coli DEC1C]
gi|419011343|ref|ZP_13558713.1| oligoribonuclease [Escherichia coli DEC1D]
gi|419021390|ref|ZP_13568680.1| oligoribonuclease monomer [Escherichia coli DEC1E]
gi|419026864|ref|ZP_13574070.1| oligoribonuclease [Escherichia coli DEC2A]
gi|419032064|ref|ZP_13579195.1| oligoribonuclease monomer [Escherichia coli DEC2C]
gi|419037591|ref|ZP_13584657.1| oligoribonuclease monomer [Escherichia coli DEC2D]
gi|419042723|ref|ZP_13589730.1| oligoribonuclease monomer [Escherichia coli DEC2E]
gi|419156730|ref|ZP_13701276.1| oligoribonuclease [Escherichia coli DEC6C]
gi|419162062|ref|ZP_13706548.1| oligoribonuclease [Escherichia coli DEC6D]
gi|419167149|ref|ZP_13711591.1| oligoribonuclease monomer [Escherichia coli DEC6E]
gi|419173164|ref|ZP_13717029.1| oligoribonuclease [Escherichia coli DEC7A]
gi|419177936|ref|ZP_13721735.1| oligoribonuclease monomer [Escherichia coli DEC7B]
gi|419183737|ref|ZP_13727317.1| oligoribonuclease monomer [Escherichia coli DEC7C]
gi|419189338|ref|ZP_13732834.1| oligoribonuclease monomer [Escherichia coli DEC7D]
gi|419194468|ref|ZP_13737901.1| oligoribonuclease [Escherichia coli DEC7E]
gi|419200011|ref|ZP_13743291.1| oligoribonuclease [Escherichia coli DEC8A]
gi|419206396|ref|ZP_13749540.1| oligoribonuclease monomer [Escherichia coli DEC8B]
gi|419212901|ref|ZP_13755954.1| oligoribonuclease monomer [Escherichia coli DEC8C]
gi|419218659|ref|ZP_13761642.1| oligoribonuclease monomer [Escherichia coli DEC8D]
gi|419224356|ref|ZP_13767258.1| oligoribonuclease monomer [Escherichia coli DEC8E]
gi|419229959|ref|ZP_13772782.1| oligoribonuclease monomer [Escherichia coli DEC9A]
gi|419235554|ref|ZP_13778311.1| oligoribonuclease monomer [Escherichia coli DEC9B]
gi|419240758|ref|ZP_13783455.1| oligoribonuclease monomer [Escherichia coli DEC9C]
gi|419246469|ref|ZP_13789093.1| oligoribonuclease monomer [Escherichia coli DEC9D]
gi|419252202|ref|ZP_13794760.1| oligoribonuclease monomer [Escherichia coli DEC9E]
gi|419257973|ref|ZP_13800463.1| oligoribonuclease monomer [Escherichia coli DEC10A]
gi|419264153|ref|ZP_13806553.1| oligoribonuclease monomer [Escherichia coli DEC10B]
gi|419270095|ref|ZP_13812434.1| oligoribonuclease monomer [Escherichia coli DEC10C]
gi|419275635|ref|ZP_13817916.1| oligoribonuclease monomer [Escherichia coli DEC10D]
gi|419281013|ref|ZP_13823246.1| oligoribonuclease monomer [Escherichia coli DEC10E]
gi|419281387|ref|ZP_13823612.1| oligoribonuclease monomer [Escherichia coli DEC10F]
gi|419292412|ref|ZP_13834490.1| oligoribonuclease monomer [Escherichia coli DEC11A]
gi|419297763|ref|ZP_13839791.1| oligoribonuclease monomer [Escherichia coli DEC11B]
gi|419303230|ref|ZP_13845215.1| oligoribonuclease [Escherichia coli DEC11C]
gi|419309286|ref|ZP_13851168.1| oligoribonuclease [Escherichia coli DEC11D]
gi|419314241|ref|ZP_13856092.1| oligoribonuclease [Escherichia coli DEC11E]
gi|419319804|ref|ZP_13861593.1| oligoribonuclease [Escherichia coli DEC12A]
gi|419326091|ref|ZP_13867768.1| oligoribonuclease monomer [Escherichia coli DEC12B]
gi|419331929|ref|ZP_13873514.1| oligoribonuclease [Escherichia coli DEC12C]
gi|419337581|ref|ZP_13879080.1| oligoribonuclease monomer [Escherichia coli DEC12D]
gi|419342849|ref|ZP_13884293.1| oligoribonuclease monomer [Escherichia coli DEC12E]
gi|419372820|ref|ZP_13913918.1| oligoribonuclease [Escherichia coli DEC14A]
gi|419378458|ref|ZP_13919464.1| oligoribonuclease monomer [Escherichia coli DEC14B]
gi|419383823|ref|ZP_13924753.1| oligoribonuclease monomer [Escherichia coli DEC14C]
gi|419389057|ref|ZP_13929910.1| oligoribonuclease monomer [Escherichia coli DEC14D]
gi|419394500|ref|ZP_13935291.1| oligoribonuclease monomer [Escherichia coli DEC15A]
gi|419399634|ref|ZP_13940388.1| oligoribonuclease monomer [Escherichia coli DEC15B]
gi|419404882|ref|ZP_13945593.1| oligoribonuclease monomer [Escherichia coli DEC15C]
gi|419410038|ref|ZP_13950717.1| oligoribonuclease monomer [Escherichia coli DEC15D]
gi|419415602|ref|ZP_13956228.1| oligoribonuclease monomer [Escherichia coli DEC15E]
gi|419703048|ref|ZP_14230628.1| oligoribonuclease [Escherichia coli SCI-07]
gi|419810429|ref|ZP_14335310.1| oligoribonuclease [Escherichia coli O32:H37 str. P4]
gi|419866657|ref|ZP_14389009.1| oligoribonuclease [Escherichia coli O103:H25 str. CVM9340]
gi|419868925|ref|ZP_14391162.1| oligoribonuclease [Escherichia coli O103:H2 str. CVM9450]
gi|419875596|ref|ZP_14397432.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9534]
gi|419885913|ref|ZP_14406573.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9545]
gi|419887976|ref|ZP_14408517.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9570]
gi|419895061|ref|ZP_14414923.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9574]
gi|419901432|ref|ZP_14420780.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM9942]
gi|419908032|ref|ZP_14426789.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
O26:H11 str. CVM10026]
gi|419921725|ref|ZP_14439764.1| oligoribonuclease [Escherichia coli 541-15]
gi|419929821|ref|ZP_14447485.1| oligoribonuclease [Escherichia coli 541-1]
gi|419935695|ref|ZP_14452764.1| oligoribonuclease [Escherichia coli 576-1]
gi|419938345|ref|ZP_14455182.1| oligoribonuclease [Escherichia coli 75]
gi|419942914|ref|ZP_14459493.1| oligoribonuclease [Escherichia coli HM605]
gi|419951106|ref|ZP_14467303.1| oligoribonuclease [Escherichia coli CUMT8]
gi|420089302|ref|ZP_14601117.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9602]
gi|420097524|ref|ZP_14608821.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9634]
gi|420101180|ref|ZP_14612304.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9455]
gi|420108145|ref|ZP_14618433.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9553]
gi|420114868|ref|ZP_14624478.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10021]
gi|420120003|ref|ZP_14629235.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10030]
gi|420127822|ref|ZP_14636413.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10224]
gi|420133350|ref|ZP_14641597.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM9952]
gi|420339047|ref|ZP_14840598.1| oligoribonuclease [Shigella flexneri K-315]
gi|420356264|ref|ZP_14857291.1| oligoribonuclease [Shigella sonnei 3226-85]
gi|420366300|ref|ZP_14867151.1| oligoribonuclease monomer [Shigella sonnei 4822-66]
gi|420383355|ref|ZP_14882771.1| oligoribonuclease [Shigella dysenteriae 225-75]
gi|420388568|ref|ZP_14887892.1| oligoribonuclease [Escherichia coli EPECa12]
gi|420394352|ref|ZP_14893588.1| oligoribonuclease monomer [Escherichia coli EPEC C342-62]
gi|421776296|ref|ZP_16212901.1| exonuclease [Escherichia coli AD30]
gi|422331286|ref|ZP_16412302.1| oligoribonuclease [Escherichia coli 4_1_47FAA]
gi|422750866|ref|ZP_16804776.1| exonuclease [Escherichia coli H252]
gi|422756058|ref|ZP_16809881.1| exonuclease [Escherichia coli H263]
gi|422761476|ref|ZP_16815234.1| exonuclease [Escherichia coli E1167]
gi|422768042|ref|ZP_16821767.1| exonuclease [Escherichia coli E1520]
gi|422772724|ref|ZP_16826411.1| exonuclease [Escherichia coli E482]
gi|422776365|ref|ZP_16830019.1| exonuclease [Escherichia coli H120]
gi|422788021|ref|ZP_16840758.1| exonuclease [Escherichia coli H489]
gi|422792969|ref|ZP_16845667.1| exonuclease [Escherichia coli TA007]
gi|422801880|ref|ZP_16850375.1| exonuclease [Escherichia coli M863]
gi|422815776|ref|ZP_16863991.1| oligoribonuclease [Escherichia coli M919]
gi|422829244|ref|ZP_16877412.1| oligoribonuclease [Escherichia coli B093]
gi|422832567|ref|ZP_16880636.1| oligoribonuclease [Escherichia coli E101]
gi|422840296|ref|ZP_16888267.1| oligoribonuclease [Escherichia coli H397]
gi|422957869|ref|ZP_16970083.1| oligoribonuclease [Escherichia coli H494]
gi|422972449|ref|ZP_16975276.1| oligoribonuclease [Escherichia coli TA124]
gi|422990466|ref|ZP_16981237.1| oligoribonuclease [Escherichia coli O104:H4 str. C227-11]
gi|422992405|ref|ZP_16983169.1| oligoribonuclease [Escherichia coli O104:H4 str. C236-11]
gi|422997625|ref|ZP_16988381.1| oligoribonuclease [Escherichia coli O104:H4 str. 09-7901]
gi|423006114|ref|ZP_16996858.1| oligoribonuclease [Escherichia coli O104:H4 str. 04-8351]
gi|423007720|ref|ZP_16998458.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-3677]
gi|423021905|ref|ZP_17012608.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4404]
gi|423027059|ref|ZP_17017752.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4522]
gi|423032896|ref|ZP_17023580.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4623]
gi|423035763|ref|ZP_17026437.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423040881|ref|ZP_17031548.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423047570|ref|ZP_17038227.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423056108|ref|ZP_17044913.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423058118|ref|ZP_17046914.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423700532|ref|ZP_17674991.1| oligoribonuclease [Escherichia coli H730]
gi|423709514|ref|ZP_17683868.1| oligoribonuclease [Escherichia coli B799]
gi|424750400|ref|ZP_18178465.1| oligoribonuclease [Escherichia coli O26:H11 str. CFSAN001629]
gi|424755542|ref|ZP_18183413.1| oligoribonuclease [Escherichia coli O111:H11 str. CFSAN001630]
gi|424771082|ref|ZP_18198244.1| oligoribonuclease [Escherichia coli O111:H8 str. CFSAN001632]
gi|425117806|ref|ZP_18519573.1| oligoribonuclease [Escherichia coli 8.0566]
gi|425122522|ref|ZP_18524185.1| oligoribonuclease [Escherichia coli 8.0569]
gi|425275542|ref|ZP_18666912.1| oligoribonuclease [Escherichia coli TW15901]
gi|425280642|ref|ZP_18671850.1| oligoribonuclease [Escherichia coli ARS4.2123]
gi|425284673|ref|ZP_18675704.1| oligoribonuclease [Escherichia coli TW00353]
gi|425303114|ref|ZP_18692986.1| oligoribonuclease [Escherichia coli 07798]
gi|425308017|ref|ZP_18697669.1| oligoribonuclease [Escherichia coli N1]
gi|425382638|ref|ZP_18766603.1| oligoribonuclease [Escherichia coli EC1865]
gi|425425223|ref|ZP_18806360.1| oligoribonuclease [Escherichia coli 0.1288]
gi|429721955|ref|ZP_19256862.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774036|ref|ZP_19306043.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02030]
gi|429779216|ref|ZP_19311176.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02033-1]
gi|429783056|ref|ZP_19314973.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02092]
gi|429788690|ref|ZP_19320568.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02093]
gi|429794893|ref|ZP_19326724.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02281]
gi|429800845|ref|ZP_19332627.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02318]
gi|429804478|ref|ZP_19336227.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02913]
gi|429809286|ref|ZP_19340992.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-03439]
gi|429815048|ref|ZP_19346710.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-04080]
gi|429820257|ref|ZP_19351875.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-03943]
gi|429906311|ref|ZP_19372281.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9990]
gi|429910455|ref|ZP_19376412.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916348|ref|ZP_19382289.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4984]
gi|429921386|ref|ZP_19387308.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927202|ref|ZP_19393109.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931136|ref|ZP_19397032.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4987]
gi|429937680|ref|ZP_19403561.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4988]
gi|429938395|ref|ZP_19404269.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946034|ref|ZP_19411890.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-6006]
gi|429948681|ref|ZP_19414529.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956948|ref|ZP_19422777.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec12-0466]
gi|432351350|ref|ZP_19594667.1| oligoribonuclease [Escherichia coli KTE2]
gi|432360733|ref|ZP_19603938.1| oligoribonuclease [Escherichia coli KTE4]
gi|432367758|ref|ZP_19610867.1| oligoribonuclease [Escherichia coli KTE10]
gi|432379404|ref|ZP_19622381.1| oligoribonuclease [Escherichia coli KTE12]
gi|432384222|ref|ZP_19627139.1| oligoribonuclease [Escherichia coli KTE15]
gi|432385111|ref|ZP_19628014.1| oligoribonuclease [Escherichia coli KTE16]
gi|432394962|ref|ZP_19637770.1| oligoribonuclease [Escherichia coli KTE21]
gi|432395601|ref|ZP_19638396.1| oligoribonuclease [Escherichia coli KTE25]
gi|432404558|ref|ZP_19647296.1| oligoribonuclease [Escherichia coli KTE26]
gi|432409287|ref|ZP_19651984.1| oligoribonuclease [Escherichia coli KTE28]
gi|432409702|ref|ZP_19652391.1| oligoribonuclease [Escherichia coli KTE39]
gi|432414715|ref|ZP_19657356.1| oligoribonuclease [Escherichia coli KTE44]
gi|432419817|ref|ZP_19662379.1| oligoribonuclease [Escherichia coli KTE178]
gi|432428825|ref|ZP_19671298.1| oligoribonuclease [Escherichia coli KTE181]
gi|432429948|ref|ZP_19672399.1| oligoribonuclease [Escherichia coli KTE187]
gi|432434330|ref|ZP_19676745.1| oligoribonuclease [Escherichia coli KTE188]
gi|432443801|ref|ZP_19686122.1| oligoribonuclease [Escherichia coli KTE189]
gi|432444138|ref|ZP_19686453.1| oligoribonuclease [Escherichia coli KTE191]
gi|432452479|ref|ZP_19694729.1| oligoribonuclease [Escherichia coli KTE193]
gi|432454439|ref|ZP_19696655.1| oligoribonuclease [Escherichia coli KTE201]
gi|432463566|ref|ZP_19705693.1| oligoribonuclease [Escherichia coli KTE204]
gi|432468656|ref|ZP_19710725.1| oligoribonuclease [Escherichia coli KTE205]
gi|432473552|ref|ZP_19715584.1| oligoribonuclease [Escherichia coli KTE206]
gi|432478522|ref|ZP_19720502.1| oligoribonuclease [Escherichia coli KTE208]
gi|432479126|ref|ZP_19721093.1| oligoribonuclease [Escherichia coli KTE210]
gi|432487966|ref|ZP_19729866.1| oligoribonuclease [Escherichia coli KTE212]
gi|432493522|ref|ZP_19735345.1| oligoribonuclease [Escherichia coli KTE214]
gi|432502797|ref|ZP_19744541.1| oligoribonuclease [Escherichia coli KTE216]
gi|432516674|ref|ZP_19753884.1| oligoribonuclease [Escherichia coli KTE224]
gi|432520372|ref|ZP_19757546.1| oligoribonuclease [Escherichia coli KTE228]
gi|432521925|ref|ZP_19759073.1| oligoribonuclease [Escherichia coli KTE230]
gi|432529073|ref|ZP_19766136.1| oligoribonuclease [Escherichia coli KTE233]
gi|432532007|ref|ZP_19769020.1| oligoribonuclease [Escherichia coli KTE234]
gi|432540540|ref|ZP_19777427.1| oligoribonuclease [Escherichia coli KTE235]
gi|432546022|ref|ZP_19782839.1| oligoribonuclease [Escherichia coli KTE236]
gi|432551503|ref|ZP_19788246.1| oligoribonuclease [Escherichia coli KTE237]
gi|432551791|ref|ZP_19788525.1| oligoribonuclease [Escherichia coli KTE47]
gi|432556728|ref|ZP_19793429.1| oligoribonuclease [Escherichia coli KTE49]
gi|432561662|ref|ZP_19798298.1| oligoribonuclease [Escherichia coli KTE51]
gi|432566623|ref|ZP_19803157.1| oligoribonuclease [Escherichia coli KTE53]
gi|432571508|ref|ZP_19808004.1| oligoribonuclease [Escherichia coli KTE55]
gi|432578472|ref|ZP_19814912.1| oligoribonuclease [Escherichia coli KTE56]
gi|432580980|ref|ZP_19817400.1| oligoribonuclease [Escherichia coli KTE57]
gi|432586044|ref|ZP_19822421.1| oligoribonuclease [Escherichia coli KTE58]
gi|432595566|ref|ZP_19831861.1| oligoribonuclease [Escherichia coli KTE62]
gi|432605649|ref|ZP_19841852.1| oligoribonuclease [Escherichia coli KTE67]
gi|432614267|ref|ZP_19850414.1| oligoribonuclease [Escherichia coli KTE72]
gi|432619551|ref|ZP_19855640.1| oligoribonuclease [Escherichia coli KTE75]
gi|432624626|ref|ZP_19860630.1| oligoribonuclease [Escherichia coli KTE76]
gi|432625339|ref|ZP_19861332.1| oligoribonuclease [Escherichia coli KTE77]
gi|432634164|ref|ZP_19870076.1| oligoribonuclease [Escherichia coli KTE80]
gi|432635075|ref|ZP_19870967.1| oligoribonuclease [Escherichia coli KTE81]
gi|432643756|ref|ZP_19879572.1| oligoribonuclease [Escherichia coli KTE83]
gi|432648868|ref|ZP_19884648.1| oligoribonuclease [Escherichia coli KTE86]
gi|432658437|ref|ZP_19894127.1| oligoribonuclease [Escherichia coli KTE93]
gi|432659009|ref|ZP_19894678.1| oligoribonuclease [Escherichia coli KTE111]
gi|432663879|ref|ZP_19899485.1| oligoribonuclease [Escherichia coli KTE116]
gi|432668603|ref|ZP_19904164.1| oligoribonuclease [Escherichia coli KTE119]
gi|432677345|ref|ZP_19912782.1| oligoribonuclease [Escherichia coli KTE142]
gi|432683643|ref|ZP_19918971.1| oligoribonuclease [Escherichia coli KTE156]
gi|432689492|ref|ZP_19924750.1| oligoribonuclease [Escherichia coli KTE161]
gi|432697082|ref|ZP_19932268.1| oligoribonuclease [Escherichia coli KTE162]
gi|432701802|ref|ZP_19936940.1| oligoribonuclease [Escherichia coli KTE169]
gi|432702332|ref|ZP_19937465.1| oligoribonuclease [Escherichia coli KTE171]
gi|432708602|ref|ZP_19943673.1| oligoribonuclease [Escherichia coli KTE6]
gi|432716058|ref|ZP_19951078.1| oligoribonuclease [Escherichia coli KTE8]
gi|432721359|ref|ZP_19956291.1| oligoribonuclease [Escherichia coli KTE17]
gi|432725757|ref|ZP_19960662.1| oligoribonuclease [Escherichia coli KTE18]
gi|432730504|ref|ZP_19965367.1| oligoribonuclease [Escherichia coli KTE45]
gi|432735216|ref|ZP_19970023.1| oligoribonuclease [Escherichia coli KTE42]
gi|432739538|ref|ZP_19974262.1| oligoribonuclease [Escherichia coli KTE23]
gi|432748260|ref|ZP_19982916.1| oligoribonuclease [Escherichia coli KTE43]
gi|432752615|ref|ZP_19987189.1| oligoribonuclease [Escherichia coli KTE29]
gi|432757233|ref|ZP_19991771.1| oligoribonuclease [Escherichia coli KTE22]
gi|432762053|ref|ZP_19996521.1| oligoribonuclease [Escherichia coli KTE46]
gi|432763068|ref|ZP_19997526.1| oligoribonuclease [Escherichia coli KTE48]
gi|432768540|ref|ZP_20002925.1| oligoribonuclease [Escherichia coli KTE50]
gi|432772933|ref|ZP_20007239.1| oligoribonuclease [Escherichia coli KTE54]
gi|432776603|ref|ZP_20010863.1| oligoribonuclease [Escherichia coli KTE59]
gi|432790304|ref|ZP_20024427.1| oligoribonuclease [Escherichia coli KTE65]
gi|432790945|ref|ZP_20025062.1| oligoribonuclease [Escherichia coli KTE78]
gi|432796934|ref|ZP_20030964.1| oligoribonuclease [Escherichia coli KTE79]
gi|432808407|ref|ZP_20042317.1| oligoribonuclease [Escherichia coli KTE91]
gi|432817994|ref|ZP_20051721.1| oligoribonuclease [Escherichia coli KTE115]
gi|432819070|ref|ZP_20052787.1| oligoribonuclease [Escherichia coli KTE118]
gi|432825198|ref|ZP_20058858.1| oligoribonuclease [Escherichia coli KTE123]
gi|432829773|ref|ZP_20063385.1| oligoribonuclease [Escherichia coli KTE135]
gi|432832828|ref|ZP_20066378.1| oligoribonuclease [Escherichia coli KTE136]
gi|432842046|ref|ZP_20075478.1| oligoribonuclease [Escherichia coli KTE141]
gi|432856408|ref|ZP_20083848.1| oligoribonuclease [Escherichia coli KTE144]
gi|432857804|ref|ZP_20084594.1| oligoribonuclease [Escherichia coli KTE146]
gi|432872199|ref|ZP_20092078.1| oligoribonuclease [Escherichia coli KTE147]
gi|432878812|ref|ZP_20096009.1| oligoribonuclease [Escherichia coli KTE154]
gi|432883096|ref|ZP_20098626.1| oligoribonuclease [Escherichia coli KTE158]
gi|432892039|ref|ZP_20104518.1| oligoribonuclease [Escherichia coli KTE165]
gi|432896266|ref|ZP_20107476.1| oligoribonuclease [Escherichia coli KTE192]
gi|432901977|ref|ZP_20111798.1| oligoribonuclease [Escherichia coli KTE194]
gi|432909073|ref|ZP_20116579.1| oligoribonuclease [Escherichia coli KTE190]
gi|432916392|ref|ZP_20121364.1| oligoribonuclease [Escherichia coli KTE173]
gi|432923766|ref|ZP_20126273.1| oligoribonuclease [Escherichia coli KTE175]
gi|432931995|ref|ZP_20131936.1| oligoribonuclease [Escherichia coli KTE184]
gi|432941231|ref|ZP_20138914.1| oligoribonuclease [Escherichia coli KTE183]
gi|432944050|ref|ZP_20140695.1| oligoribonuclease [Escherichia coli KTE196]
gi|432951762|ref|ZP_20145157.1| oligoribonuclease [Escherichia coli KTE197]
gi|432958180|ref|ZP_20149322.1| oligoribonuclease [Escherichia coli KTE202]
gi|432965927|ref|ZP_20154847.1| oligoribonuclease [Escherichia coli KTE203]
gi|432969891|ref|ZP_20158776.1| oligoribonuclease [Escherichia coli KTE207]
gi|432976488|ref|ZP_20165316.1| oligoribonuclease [Escherichia coli KTE209]
gi|432979086|ref|ZP_20167880.1| oligoribonuclease [Escherichia coli KTE211]
gi|432988045|ref|ZP_20176750.1| oligoribonuclease [Escherichia coli KTE215]
gi|432988705|ref|ZP_20177380.1| oligoribonuclease [Escherichia coli KTE217]
gi|432993504|ref|ZP_20182128.1| oligoribonuclease [Escherichia coli KTE218]
gi|433003209|ref|ZP_20191711.1| oligoribonuclease [Escherichia coli KTE227]
gi|433010481|ref|ZP_20198887.1| oligoribonuclease [Escherichia coli KTE229]
gi|433016543|ref|ZP_20204858.1| oligoribonuclease [Escherichia coli KTE104]
gi|433021418|ref|ZP_20209486.1| oligoribonuclease [Escherichia coli KTE105]
gi|433026121|ref|ZP_20214079.1| oligoribonuclease [Escherichia coli KTE106]
gi|433031136|ref|ZP_20218971.1| oligoribonuclease [Escherichia coli KTE109]
gi|433036131|ref|ZP_20223808.1| oligoribonuclease [Escherichia coli KTE112]
gi|433041220|ref|ZP_20228798.1| oligoribonuclease [Escherichia coli KTE113]
gi|433045708|ref|ZP_20233174.1| oligoribonuclease [Escherichia coli KTE117]
gi|433050642|ref|ZP_20237950.1| oligoribonuclease [Escherichia coli KTE120]
gi|433055792|ref|ZP_20242934.1| oligoribonuclease [Escherichia coli KTE122]
gi|433060743|ref|ZP_20247763.1| oligoribonuclease [Escherichia coli KTE124]
gi|433065637|ref|ZP_20252530.1| oligoribonuclease [Escherichia coli KTE125]
gi|433070570|ref|ZP_20257322.1| oligoribonuclease [Escherichia coli KTE128]
gi|433075550|ref|ZP_20262174.1| oligoribonuclease [Escherichia coli KTE129]
gi|433080415|ref|ZP_20266923.1| oligoribonuclease [Escherichia coli KTE131]
gi|433085143|ref|ZP_20271577.1| oligoribonuclease [Escherichia coli KTE133]
gi|433089948|ref|ZP_20276296.1| oligoribonuclease [Escherichia coli KTE137]
gi|433099052|ref|ZP_20285208.1| oligoribonuclease [Escherichia coli KTE139]
gi|433103815|ref|ZP_20289872.1| oligoribonuclease [Escherichia coli KTE145]
gi|433108509|ref|ZP_20294456.1| oligoribonuclease [Escherichia coli KTE148]
gi|433113487|ref|ZP_20299324.1| oligoribonuclease [Escherichia coli KTE150]
gi|433118153|ref|ZP_20303922.1| oligoribonuclease [Escherichia coli KTE153]
gi|433122879|ref|ZP_20308524.1| oligoribonuclease [Escherichia coli KTE157]
gi|433132758|ref|ZP_20318171.1| oligoribonuclease [Escherichia coli KTE163]
gi|433137428|ref|ZP_20322745.1| oligoribonuclease [Escherichia coli KTE166]
gi|433146854|ref|ZP_20331972.1| oligoribonuclease [Escherichia coli KTE168]
gi|433156450|ref|ZP_20341366.1| oligoribonuclease [Escherichia coli KTE176]
gi|433161329|ref|ZP_20346133.1| oligoribonuclease [Escherichia coli KTE177]
gi|433166238|ref|ZP_20350955.1| oligoribonuclease [Escherichia coli KTE179]
gi|433171251|ref|ZP_20355858.1| oligoribonuclease [Escherichia coli KTE180]
gi|433176107|ref|ZP_20360599.1| oligoribonuclease [Escherichia coli KTE232]
gi|433181035|ref|ZP_20365398.1| oligoribonuclease [Escherichia coli KTE82]
gi|433186043|ref|ZP_20370265.1| oligoribonuclease [Escherichia coli KTE85]
gi|433191011|ref|ZP_20375086.1| oligoribonuclease [Escherichia coli KTE88]
gi|433196247|ref|ZP_20380202.1| oligoribonuclease [Escherichia coli KTE90]
gi|433200976|ref|ZP_20384847.1| oligoribonuclease [Escherichia coli KTE94]
gi|433210409|ref|ZP_20394061.1| oligoribonuclease [Escherichia coli KTE97]
gi|433215251|ref|ZP_20398812.1| oligoribonuclease [Escherichia coli KTE99]
gi|433326552|ref|ZP_20403358.1| oligoribonuclease [Escherichia coli J96]
gi|442590500|ref|ZP_21009265.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|442598993|ref|ZP_21016730.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|443615678|ref|YP_007379534.1| oligoribonuclease [Escherichia coli APEC O78]
gi|450197117|ref|ZP_21892974.1| oligoribonuclease [Escherichia coli SEPT362]
gi|450230079|ref|ZP_21897945.1| oligoribonuclease [Escherichia coli O08]
gi|450254795|ref|ZP_21902644.1| oligoribonuclease [Escherichia coli S17]
gi|67469688|sp|P0A784.2|ORN_ECOLI RecName: Full=Oligoribonuclease
gi|67469689|sp|P0A785.2|ORN_ECOL6 RecName: Full=Oligoribonuclease
gi|166918637|sp|A7ZV33.1|ORN_ECO24 RecName: Full=Oligoribonuclease
gi|166918638|sp|A8A7Q9.1|ORN_ECOHS RecName: Full=Oligoribonuclease
gi|85676916|dbj|BAE78166.1| oligoribonuclease [Escherichia coli str. K12 substr. W3110]
gi|87082382|gb|AAC77122.2| oligoribonuclease [Escherichia coli str. K-12 substr. MG1655]
gi|157069308|gb|ABV08563.1| oligoribonuclease [Escherichia coli HS]
gi|157077896|gb|ABV17604.1| oligoribonuclease [Escherichia coli E24377A]
gi|169756753|gb|ACA79452.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli ATCC
8739]
gi|169891446|gb|ACB05153.1| oligoribonuclease [Escherichia coli str. K-12 substr. DH10B]
gi|170519673|gb|ACB17851.1| oligoribonuclease [Escherichia coli SMS-3-5]
gi|187427212|gb|ACD06486.1| oligoribonuclease [Shigella boydii CDC 3083-94]
gi|188491135|gb|EDU66238.1| oligoribonuclease [Escherichia coli 53638]
gi|190904324|gb|EDV64033.1| oligoribonuclease [Escherichia coli B7A]
gi|192926597|gb|EDV81227.1| oligoribonuclease [Escherichia coli E22]
gi|194412981|gb|EDX29270.1| oligoribonuclease [Escherichia coli B171]
gi|194423767|gb|EDX39756.1| oligoribonuclease [Escherichia coli 101-1]
gi|215267581|emb|CAS12036.1| oligoribonuclease [Escherichia coli O127:H6 str. E2348/69]
gi|218354646|emb|CAV01632.1| oligoribonuclease [Escherichia coli 55989]
gi|218363486|emb|CAR01140.1| oligoribonuclease [Escherichia coli IAI1]
gi|218368093|emb|CAR05900.1| oligoribonuclease [Escherichia coli S88]
gi|218372848|emb|CAR20727.1| oligoribonuclease [Escherichia coli IAI39]
gi|218430063|emb|CAR10906.1| oligoribonuclease [Escherichia coli ED1a]
gi|218434873|emb|CAR15811.1| oligoribonuclease [Escherichia coli UMN026]
gi|222035935|emb|CAP78680.1| Oligoribonuclease [Escherichia coli LF82]
gi|238861937|gb|ACR63935.1| oligoribonuclease [Escherichia coli BW2952]
gi|242379688|emb|CAQ34511.1| oligoribonuclease monomer, subunit of oligoribonuclease
[Escherichia coli BL21(DE3)]
gi|253326254|gb|ACT30856.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975995|gb|ACT41666.1| oligoribonuclease [Escherichia coli B str. REL606]
gi|253980151|gb|ACT45821.1| oligoribonuclease [Escherichia coli BL21(DE3)]
gi|257756967|dbj|BAI28469.1| oligoribonuclease Orn [Escherichia coli O26:H11 str. 11368]
gi|257762142|dbj|BAI33639.1| oligoribonuclease Orn [Escherichia coli O103:H2 str. 12009]
gi|257767283|dbj|BAI38778.1| oligoribonuclease Orn [Escherichia coli O111:H- str. 11128]
gi|260451008|gb|ACX41430.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli DH1]
gi|284924347|emb|CBG37463.1| oligoribonuclease [Escherichia coli 042]
gi|291320928|gb|EFE60370.1| orn [Escherichia coli B088]
gi|291429707|gb|EFF02721.1| oligoribonuclease [Escherichia coli FVEC1412]
gi|291430386|gb|EFF03384.1| orn oligoribonuclease [Escherichia coli B185]
gi|291472143|gb|EFF14625.1| oligoribonuclease [Escherichia coli B354]
gi|294490725|gb|ADE89481.1| oligoribonuclease [Escherichia coli IHE3034]
gi|298280656|gb|EFI22157.1| oligoribonuclease [Escherichia coli FVEC1302]
gi|299878895|gb|EFI87106.1| exonuclease [Escherichia coli MS 196-1]
gi|305851282|gb|EFM51737.1| oligoribonuclease [Escherichia coli NC101]
gi|306907808|gb|EFN38309.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli W]
gi|307556332|gb|ADN49107.1| oligoribonuclease [Escherichia coli ABU 83972]
gi|307629236|gb|ADN73540.1| oligoribonuclease [Escherichia coli UM146]
gi|308924419|gb|EFP69915.1| exonuclease family protein [Shigella dysenteriae 1617]
gi|309704670|emb|CBJ04020.1| oligoribonuclease [Escherichia coli ETEC H10407]
gi|310331562|gb|EFP98818.1| exonuclease family protein [Escherichia coli 1827-70]
gi|312289081|gb|EFR16975.1| exonuclease family protein [Escherichia coli 2362-75]
gi|312948814|gb|ADR29641.1| oligoribonuclease [Escherichia coli O83:H1 str. NRG 857C]
gi|315063479|gb|ADT77806.1| oligoribonuclease [Escherichia coli W]
gi|315138719|dbj|BAJ45878.1| oligoribonuclease [Escherichia coli DH1]
gi|320173681|gb|EFW48871.1| 3'-to-5' oligoribonuclease (orn) [Shigella dysenteriae CDC 74-1112]
gi|320193545|gb|EFW68182.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli WV_060327]
gi|323156018|gb|EFZ42180.1| exonuclease family protein [Escherichia coli EPECa14]
gi|323166646|gb|EFZ52404.1| exonuclease family protein [Shigella sonnei 53G]
gi|323171596|gb|EFZ57242.1| exonuclease family protein [Escherichia coli LT-68]
gi|323176077|gb|EFZ61669.1| exonuclease family protein [Escherichia coli OK1180]
gi|323182271|gb|EFZ67681.1| exonuclease family protein [Escherichia coli OK1357]
gi|323189956|gb|EFZ75234.1| exonuclease family protein [Escherichia coli RN587/1]
gi|323380442|gb|ADX52710.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
KO11FL]
gi|323935480|gb|EGB31818.1| exonuclease [Escherichia coli E1520]
gi|323940084|gb|EGB36278.1| exonuclease [Escherichia coli E482]
gi|323946101|gb|EGB42137.1| exonuclease [Escherichia coli H120]
gi|323950766|gb|EGB46644.1| exonuclease [Escherichia coli H252]
gi|323955595|gb|EGB51358.1| exonuclease [Escherichia coli H263]
gi|323960351|gb|EGB55990.1| exonuclease [Escherichia coli H489]
gi|323965551|gb|EGB61005.1| exonuclease [Escherichia coli M863]
gi|323970580|gb|EGB65839.1| exonuclease [Escherichia coli TA007]
gi|324118730|gb|EGC12622.1| exonuclease [Escherichia coli E1167]
gi|327250105|gb|EGE61824.1| exonuclease family protein [Escherichia coli STEC_7v]
gi|330908507|gb|EGH37026.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli AA86]
gi|331035887|gb|EGI08125.1| oligoribonuclease [Escherichia coli H736]
gi|331040684|gb|EGI12842.1| oligoribonuclease [Escherichia coli M605]
gi|331046347|gb|EGI18437.1| oligoribonuclease [Escherichia coli M718]
gi|331051782|gb|EGI23821.1| oligoribonuclease [Escherichia coli TA206]
gi|331061659|gb|EGI33585.1| oligoribonuclease [Escherichia coli TA271]
gi|331071161|gb|EGI42518.1| oligoribonuclease [Escherichia coli TA280]
gi|331071758|gb|EGI43094.1| oligoribonuclease [Escherichia coli H591]
gi|331081405|gb|EGI52566.1| oligoribonuclease [Escherichia coli H299]
gi|332346241|gb|AEE59575.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|333972422|gb|AEG39227.1| 3'-to-5' oligoribonuclease [Escherichia coli NA114]
gi|338767599|gb|EGP22415.1| Oligoribonuclease [Escherichia coli PCN033]
gi|339417899|gb|AEJ59571.1| exonuclease family protein [Escherichia coli UMNF18]
gi|340731623|gb|EGR60765.1| oligoribonuclease [Escherichia coli O104:H4 str. 01-09591]
gi|340737425|gb|EGR71684.1| oligoribonuclease [Escherichia coli O104:H4 str. LB226692]
gi|341918020|gb|EGT67635.1| orn [Escherichia coli O104:H4 str. C227-11]
gi|342363813|gb|EGU27918.1| oligoribonuclease [Escherichia coli XH140A]
gi|344194010|gb|EGV48086.1| oligoribonuclease [Escherichia coli XH001]
gi|345330999|gb|EGW63462.1| exonuclease family protein [Escherichia coli 2534-86]
gi|345332068|gb|EGW64526.1| exonuclease family protein [Escherichia coli STEC_B2F1]
gi|345345423|gb|EGW77761.1| exonuclease family protein [Escherichia coli STEC_94C]
gi|345347085|gb|EGW79400.1| exonuclease family protein [Escherichia coli 3030-1]
gi|345355875|gb|EGW88083.1| exonuclease family protein [Escherichia coli STEC_EH250]
gi|345366520|gb|EGW98609.1| exonuclease family protein [Escherichia coli STEC_DG131-3]
gi|345368539|gb|EGX00537.1| exonuclease family protein [Escherichia coli G58-1]
gi|345369371|gb|EGX01355.1| exonuclease family protein [Escherichia coli STEC_H.1.8]
gi|345389016|gb|EGX18823.1| exonuclease family protein [Escherichia coli TX1999]
gi|345391694|gb|EGX21480.1| exonuclease family protein [Escherichia coli STEC_S1191]
gi|349740864|gb|AEQ15570.1| oligoribonuclease [Escherichia coli O7:K1 str. CE10]
gi|354859452|gb|EHF19899.1| oligoribonuclease [Escherichia coli O104:H4 str. C227-11]
gi|354860688|gb|EHF21133.1| oligoribonuclease [Escherichia coli O104:H4 str. 04-8351]
gi|354866148|gb|EHF26571.1| oligoribonuclease [Escherichia coli O104:H4 str. C236-11]
gi|354876493|gb|EHF36853.1| oligoribonuclease [Escherichia coli O104:H4 str. 09-7901]
gi|354883388|gb|EHF43708.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4404]
gi|354884589|gb|EHF44900.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-3677]
gi|354886842|gb|EHF47123.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4522]
gi|354890807|gb|EHF51044.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4623]
gi|354902987|gb|EHF63098.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354906427|gb|EHF66503.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354908737|gb|EHF68784.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354910866|gb|EHF70881.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354919297|gb|EHF79246.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C5]
gi|355349080|gb|EHF98291.1| oligoribonuclease [Escherichia coli cloneA_i1]
gi|355423071|gb|AER87268.1| oligoribonuclease [Escherichia coli str. 'clone D i2']
gi|355427991|gb|AER92187.1| oligoribonuclease [Escherichia coli str. 'clone D i14']
gi|359334272|dbj|BAL40719.1| oligoribonuclease [Escherichia coli str. K-12 substr. MDS42]
gi|371597443|gb|EHN86265.1| oligoribonuclease [Escherichia coli H494]
gi|371597686|gb|EHN86505.1| oligoribonuclease [Escherichia coli TA124]
gi|371607219|gb|EHN95796.1| oligoribonuclease [Escherichia coli H397]
gi|371610401|gb|EHN98930.1| oligoribonuclease [Escherichia coli B093]
gi|371614716|gb|EHO03199.1| oligoribonuclease [Escherichia coli E101]
gi|373247611|gb|EHP67051.1| oligoribonuclease [Escherichia coli 4_1_47FAA]
gi|375321784|gb|EHS67589.1| oligoribonuclease [Escherichia coli O157:H43 str. T22]
gi|377837690|gb|EHU02817.1| oligoribonuclease monomer [Escherichia coli DEC1C]
gi|377837941|gb|EHU03067.1| oligoribonuclease monomer [Escherichia coli DEC1A]
gi|377840044|gb|EHU05120.1| oligoribonuclease monomer [Escherichia coli DEC1B]
gi|377854911|gb|EHU19787.1| oligoribonuclease monomer [Escherichia coli DEC1E]
gi|377856175|gb|EHU21036.1| oligoribonuclease [Escherichia coli DEC2A]
gi|377864877|gb|EHU29669.1| oligoribonuclease [Escherichia coli DEC1D]
gi|377869445|gb|EHU34161.1| oligoribonuclease monomer [Escherichia coli DEC2B]
gi|377870669|gb|EHU35343.1| oligoribonuclease monomer [Escherichia coli DEC2C]
gi|377872903|gb|EHU37545.1| oligoribonuclease monomer [Escherichia coli DEC2D]
gi|377884391|gb|EHU48903.1| oligoribonuclease monomer [Escherichia coli DEC2E]
gi|377989990|gb|EHV53153.1| oligoribonuclease [Escherichia coli DEC6C]
gi|378003174|gb|EHV66220.1| oligoribonuclease [Escherichia coli DEC6D]
gi|378005449|gb|EHV68453.1| oligoribonuclease monomer [Escherichia coli DEC6E]
gi|378008120|gb|EHV71080.1| oligoribonuclease [Escherichia coli DEC7A]
gi|378020507|gb|EHV83253.1| oligoribonuclease monomer [Escherichia coli DEC7C]
gi|378022683|gb|EHV85368.1| oligoribonuclease monomer [Escherichia coli DEC7D]
gi|378026789|gb|EHV89422.1| oligoribonuclease monomer [Escherichia coli DEC7B]
gi|378033336|gb|EHV95915.1| oligoribonuclease [Escherichia coli DEC7E]
gi|378041445|gb|EHW03906.1| oligoribonuclease [Escherichia coli DEC8A]
gi|378041538|gb|EHW03998.1| oligoribonuclease monomer [Escherichia coli DEC8B]
gi|378046061|gb|EHW08442.1| oligoribonuclease monomer [Escherichia coli DEC8C]
gi|378056363|gb|EHW18607.1| oligoribonuclease monomer [Escherichia coli DEC8D]
gi|378058990|gb|EHW21195.1| oligoribonuclease monomer [Escherichia coli DEC8E]
gi|378066332|gb|EHW28468.1| oligoribonuclease monomer [Escherichia coli DEC9A]
gi|378071743|gb|EHW33811.1| oligoribonuclease monomer [Escherichia coli DEC9B]
gi|378077214|gb|EHW39209.1| oligoribonuclease monomer [Escherichia coli DEC9C]
gi|378085648|gb|EHW47535.1| oligoribonuclease monomer [Escherichia coli DEC9D]
gi|378087250|gb|EHW49111.1| oligoribonuclease monomer [Escherichia coli DEC9E]
gi|378094686|gb|EHW56478.1| oligoribonuclease monomer [Escherichia coli DEC10A]
gi|378099807|gb|EHW61505.1| oligoribonuclease monomer [Escherichia coli DEC10B]
gi|378106012|gb|EHW67648.1| oligoribonuclease monomer [Escherichia coli DEC10C]
gi|378111249|gb|EHW72834.1| oligoribonuclease monomer [Escherichia coli DEC10D]
gi|378122545|gb|EHW83973.1| oligoribonuclease monomer [Escherichia coli DEC10E]
gi|378123183|gb|EHW84601.1| oligoribonuclease monomer [Escherichia coli DEC11A]
gi|378136992|gb|EHW98275.1| oligoribonuclease monomer [Escherichia coli DEC11B]
gi|378140987|gb|EHX02204.1| oligoribonuclease monomer [Escherichia coli DEC10F]
gi|378142724|gb|EHX03924.1| oligoribonuclease [Escherichia coli DEC11D]
gi|378144588|gb|EHX05759.1| oligoribonuclease [Escherichia coli DEC11C]
gi|378153430|gb|EHX14514.1| oligoribonuclease [Escherichia coli DEC11E]
gi|378159860|gb|EHX20862.1| oligoribonuclease monomer [Escherichia coli DEC12B]
gi|378162980|gb|EHX23935.1| oligoribonuclease [Escherichia coli DEC12A]
gi|378163855|gb|EHX24806.1| oligoribonuclease [Escherichia coli DEC12C]
gi|378177950|gb|EHX38734.1| oligoribonuclease monomer [Escherichia coli DEC12D]
gi|378181066|gb|EHX41742.1| oligoribonuclease monomer [Escherichia coli DEC12E]
gi|378211250|gb|EHX71590.1| oligoribonuclease [Escherichia coli DEC14A]
gi|378212572|gb|EHX72894.1| oligoribonuclease monomer [Escherichia coli DEC14B]
gi|378222560|gb|EHX82796.1| oligoribonuclease monomer [Escherichia coli DEC14C]
gi|378225605|gb|EHX85802.1| oligoribonuclease monomer [Escherichia coli DEC14D]
gi|378232399|gb|EHX92500.1| oligoribonuclease monomer [Escherichia coli DEC15A]
gi|378238784|gb|EHX98778.1| oligoribonuclease monomer [Escherichia coli DEC15B]
gi|378241637|gb|EHY01603.1| oligoribonuclease monomer [Escherichia coli DEC15C]
gi|378249503|gb|EHY09412.1| oligoribonuclease monomer [Escherichia coli DEC15D]
gi|378254704|gb|EHY14567.1| oligoribonuclease monomer [Escherichia coli DEC15E]
gi|380345818|gb|EIA34126.1| oligoribonuclease [Escherichia coli SCI-07]
gi|383394492|gb|AFH19450.1| oligoribonuclease [Escherichia coli KO11FL]
gi|383407799|gb|AFH14042.1| oligoribonuclease [Escherichia coli W]
gi|385156780|gb|EIF18775.1| oligoribonuclease [Escherichia coli O32:H37 str. P4]
gi|385540675|gb|EIF87494.1| oligoribonuclease [Escherichia coli M919]
gi|385706068|gb|EIG43127.1| oligoribonuclease [Escherichia coli B799]
gi|385713959|gb|EIG50884.1| oligoribonuclease [Escherichia coli H730]
gi|386138697|gb|EIG79856.1| oligoribonuclease [Escherichia coli 1.2741]
gi|386144282|gb|EIG90749.1| oligoribonuclease [Escherichia coli 97.0246]
gi|386150696|gb|EIH01985.1| oligoribonuclease [Escherichia coli 5.0588]
gi|386156816|gb|EIH13159.1| oligoribonuclease [Escherichia coli 97.0259]
gi|386161796|gb|EIH23599.1| oligoribonuclease [Escherichia coli 1.2264]
gi|386165183|gb|EIH31703.1| oligoribonuclease [Escherichia coli 96.0497]
gi|386174590|gb|EIH46583.1| oligoribonuclease [Escherichia coli 99.0741]
gi|386176270|gb|EIH53749.1| oligoribonuclease [Escherichia coli 3.2608]
gi|386183546|gb|EIH66294.1| oligoribonuclease [Escherichia coli 93.0624]
gi|386192151|gb|EIH80886.1| oligoribonuclease [Escherichia coli 4.0522]
gi|386196840|gb|EIH91052.1| oligoribonuclease [Escherichia coli JB1-95]
gi|386200118|gb|EIH99109.1| oligoribonuclease [Escherichia coli 96.154]
gi|386205448|gb|EII09958.1| oligoribonuclease [Escherichia coli 5.0959]
gi|386210871|gb|EII21342.1| oligoribonuclease [Escherichia coli 9.0111]
gi|386216337|gb|EII32826.1| oligoribonuclease [Escherichia coli 4.0967]
gi|386225504|gb|EII47834.1| oligoribonuclease [Escherichia coli 2.3916]
gi|386228640|gb|EII55996.1| oligoribonuclease [Escherichia coli 3.3884]
gi|386233839|gb|EII65819.1| oligoribonuclease [Escherichia coli 2.4168]
gi|386238349|gb|EII75286.1| oligoribonuclease [Escherichia coli 3.2303]
gi|386245746|gb|EII87476.1| oligoribonuclease [Escherichia coli 3003]
gi|386248562|gb|EII94734.1| oligoribonuclease [Escherichia coli TW07793]
gi|386251589|gb|EIJ01281.1| oligoribonuclease [Escherichia coli B41]
gi|386258675|gb|EIJ14153.1| oligoribonuclease [Escherichia coli 900105 (10e)]
gi|388334276|gb|EIL00875.1| oligoribonuclease [Escherichia coli O103:H25 str. CVM9340]
gi|388343697|gb|EIL09628.1| oligoribonuclease [Escherichia coli O103:H2 str. CVM9450]
gi|388347546|gb|EIL13210.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9545]
gi|388348310|gb|EIL13921.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9534]
gi|388361484|gb|EIL25592.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9570]
gi|388362260|gb|EIL26292.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9574]
gi|388375889|gb|EIL38869.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
O26:H11 str. CVM10026]
gi|388376121|gb|EIL39078.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM9942]
gi|388397246|gb|EIL58265.1| oligoribonuclease [Escherichia coli 541-15]
gi|388402375|gb|EIL62947.1| oligoribonuclease [Escherichia coli 541-1]
gi|388403906|gb|EIL64404.1| oligoribonuclease [Escherichia coli 576-1]
gi|388410614|gb|EIL70829.1| oligoribonuclease [Escherichia coli 75]
gi|388415247|gb|EIL75179.1| oligoribonuclease [Escherichia coli CUMT8]
gi|388422208|gb|EIL81793.1| oligoribonuclease [Escherichia coli HM605]
gi|391256740|gb|EIQ15863.1| oligoribonuclease [Shigella flexneri K-315]
gi|391290372|gb|EIQ48831.1| oligoribonuclease [Shigella sonnei 3226-85]
gi|391291189|gb|EIQ49605.1| oligoribonuclease monomer [Shigella sonnei 4822-66]
gi|391296795|gb|EIQ54872.1| oligoribonuclease [Shigella dysenteriae 225-75]
gi|391300493|gb|EIQ58411.1| oligoribonuclease [Escherichia coli EPECa12]
gi|391308412|gb|EIQ66110.1| oligoribonuclease monomer [Escherichia coli EPEC C342-62]
gi|394383920|gb|EJE61499.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9634]
gi|394387686|gb|EJE65069.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10224]
gi|394388042|gb|EJE65370.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9602]
gi|394408055|gb|EJE82787.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10021]
gi|394410850|gb|EJE85169.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9553]
gi|394417533|gb|EJE91258.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9455]
gi|394426151|gb|EJE99040.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM9952]
gi|394430124|gb|EJF02476.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10030]
gi|397782246|gb|EJK93114.1| exonuclease family protein [Escherichia coli STEC_O31]
gi|397893868|gb|EJL10322.1| oligoribonuclease monomer [Shigella sonnei str. Moseley]
gi|404293181|gb|EEH72285.2| oligoribonuclease [Escherichia sp. 1_1_43]
gi|406779775|gb|AFS59199.1| oligoribonuclease [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407056367|gb|AFS76418.1| oligoribonuclease [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063246|gb|AFS84293.1| oligoribonuclease [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408188959|gb|EKI14730.1| oligoribonuclease [Escherichia coli TW15901]
gi|408196738|gb|EKI22017.1| oligoribonuclease [Escherichia coli ARS4.2123]
gi|408200497|gb|EKI25675.1| oligoribonuclease [Escherichia coli TW00353]
gi|408209554|gb|EKI34143.1| oligoribonuclease [Escherichia coli 07798]
gi|408224007|gb|EKI47745.1| oligoribonuclease [Escherichia coli N1]
gi|408292490|gb|EKJ11011.1| oligoribonuclease [Escherichia coli EC1865]
gi|408339999|gb|EKJ54518.1| oligoribonuclease [Escherichia coli 0.1288]
gi|408458685|gb|EKJ82471.1| exonuclease [Escherichia coli AD30]
gi|408562141|gb|EKK38312.1| oligoribonuclease [Escherichia coli 8.0566]
gi|408563271|gb|EKK39409.1| oligoribonuclease [Escherichia coli 8.0569]
gi|421940868|gb|EKT98305.1| oligoribonuclease [Escherichia coli O26:H11 str. CFSAN001629]
gi|421941068|gb|EKT98494.1| oligoribonuclease [Escherichia coli O111:H8 str. CFSAN001632]
gi|421950289|gb|EKU07173.1| oligoribonuclease [Escherichia coli O111:H11 str. CFSAN001630]
gi|429353627|gb|EKY90334.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02030]
gi|429354552|gb|EKY91249.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02033-1]
gi|429355141|gb|EKY91834.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02092]
gi|429368306|gb|EKZ04894.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02093]
gi|429369543|gb|EKZ06119.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02281]
gi|429371607|gb|EKZ08161.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02318]
gi|429383776|gb|EKZ20234.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02913]
gi|429387301|gb|EKZ23742.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-03439]
gi|429387730|gb|EKZ24166.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-03943]
gi|429398527|gb|EKZ34862.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-04080]
gi|429400698|gb|EKZ37012.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9990]
gi|429401838|gb|EKZ38133.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9450]
gi|429411549|gb|EKZ47756.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4984]
gi|429413499|gb|EKZ49685.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4986]
gi|429420356|gb|EKZ56485.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4987]
gi|429424295|gb|EKZ60397.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4988]
gi|429429692|gb|EKZ65759.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437443|gb|EKZ73449.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-5604]
gi|429442815|gb|EKZ78768.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec12-0465]
gi|429446068|gb|EKZ82005.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-6006]
gi|429452705|gb|EKZ88585.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec12-0466]
gi|429457256|gb|EKZ93096.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9941]
gi|430872016|gb|ELB95636.1| oligoribonuclease [Escherichia coli KTE4]
gi|430882085|gb|ELC05290.1| oligoribonuclease [Escherichia coli KTE2]
gi|430890280|gb|ELC12917.1| oligoribonuclease [Escherichia coli KTE10]
gi|430895052|gb|ELC17328.1| oligoribonuclease [Escherichia coli KTE12]
gi|430902409|gb|ELC24282.1| oligoribonuclease [Escherichia coli KTE15]
gi|430911233|gb|ELC32520.1| oligoribonuclease [Escherichia coli KTE16]
gi|430912316|gb|ELC33498.1| oligoribonuclease [Escherichia coli KTE21]
gi|430919584|gb|ELC40515.1| oligoribonuclease [Escherichia coli KTE25]
gi|430921953|gb|ELC42776.1| oligoribonuclease [Escherichia coli KTE26]
gi|430925436|gb|ELC46107.1| oligoribonuclease [Escherichia coli KTE28]
gi|430939736|gb|ELC59947.1| oligoribonuclease [Escherichia coli KTE39]
gi|430946053|gb|ELC66118.1| oligoribonuclease [Escherichia coli KTE44]
gi|430948594|gb|ELC68181.1| oligoribonuclease [Escherichia coli KTE178]
gi|430949530|gb|ELC68962.1| oligoribonuclease [Escherichia coli KTE181]
gi|430957824|gb|ELC76427.1| oligoribonuclease [Escherichia coli KTE187]
gi|430960399|gb|ELC78555.1| oligoribonuclease [Escherichia coli KTE189]
gi|430968923|gb|ELC86093.1| oligoribonuclease [Escherichia coli KTE188]
gi|430976081|gb|ELC92957.1| oligoribonuclease [Escherichia coli KTE193]
gi|430977620|gb|ELC94454.1| oligoribonuclease [Escherichia coli KTE191]
gi|430984724|gb|ELD01346.1| oligoribonuclease [Escherichia coli KTE204]
gi|430987332|gb|ELD03873.1| oligoribonuclease [Escherichia coli KTE201]
gi|430989141|gb|ELD05608.1| oligoribonuclease [Escherichia coli KTE205]
gi|430994822|gb|ELD11140.1| oligoribonuclease [Escherichia coli KTE206]
gi|431000457|gb|ELD16517.1| oligoribonuclease [Escherichia coli KTE208]
gi|431012086|gb|ELD26156.1| oligoribonuclease [Escherichia coli KTE210]
gi|431012734|gb|ELD26502.1| oligoribonuclease [Escherichia coli KTE212]
gi|431025061|gb|ELD38179.1| oligoribonuclease [Escherichia coli KTE216]
gi|431030076|gb|ELD43103.1| oligoribonuclease [Escherichia coli KTE214]
gi|431036858|gb|ELD47847.1| oligoribonuclease [Escherichia coli KTE224]
gi|431046622|gb|ELD56719.1| oligoribonuclease [Escherichia coli KTE228]
gi|431056386|gb|ELD65899.1| oligoribonuclease [Escherichia coli KTE230]
gi|431058679|gb|ELD68070.1| oligoribonuclease [Escherichia coli KTE233]
gi|431065685|gb|ELD74445.1| oligoribonuclease [Escherichia coli KTE234]
gi|431066097|gb|ELD74845.1| oligoribonuclease [Escherichia coli KTE235]
gi|431069619|gb|ELD77947.1| oligoribonuclease [Escherichia coli KTE236]
gi|431075144|gb|ELD82679.1| oligoribonuclease [Escherichia coli KTE237]
gi|431087490|gb|ELD93411.1| oligoribonuclease [Escherichia coli KTE47]
gi|431095770|gb|ELE01375.1| oligoribonuclease [Escherichia coli KTE49]
gi|431101864|gb|ELE06773.1| oligoribonuclease [Escherichia coli KTE51]
gi|431103860|gb|ELE08468.1| oligoribonuclease [Escherichia coli KTE53]
gi|431110494|gb|ELE14420.1| oligoribonuclease [Escherichia coli KTE56]
gi|431112987|gb|ELE16668.1| oligoribonuclease [Escherichia coli KTE55]
gi|431123552|gb|ELE26288.1| oligoribonuclease [Escherichia coli KTE57]
gi|431125042|gb|ELE27482.1| oligoribonuclease [Escherichia coli KTE58]
gi|431135069|gb|ELE36997.1| oligoribonuclease [Escherichia coli KTE62]
gi|431143348|gb|ELE45083.1| oligoribonuclease [Escherichia coli KTE67]
gi|431145293|gb|ELE46950.1| oligoribonuclease [Escherichia coli KTE72]
gi|431148787|gb|ELE50066.1| oligoribonuclease [Escherichia coli KTE75]
gi|431153917|gb|ELE54810.1| oligoribonuclease [Escherichia coli KTE76]
gi|431166203|gb|ELE66529.1| oligoribonuclease [Escherichia coli KTE80]
gi|431166887|gb|ELE67191.1| oligoribonuclease [Escherichia coli KTE77]
gi|431175167|gb|ELE75187.1| oligoribonuclease [Escherichia coli KTE81]
gi|431176238|gb|ELE76203.1| oligoribonuclease [Escherichia coli KTE83]
gi|431176817|gb|ELE76758.1| oligoribonuclease [Escherichia coli KTE86]
gi|431186783|gb|ELE86322.1| oligoribonuclease [Escherichia coli KTE93]
gi|431204956|gb|ELF03470.1| oligoribonuclease [Escherichia coli KTE111]
gi|431205965|gb|ELF04401.1| oligoribonuclease [Escherichia coli KTE116]
gi|431209443|gb|ELF07552.1| oligoribonuclease [Escherichia coli KTE142]
gi|431215294|gb|ELF12991.1| oligoribonuclease [Escherichia coli KTE119]
gi|431226525|gb|ELF23689.1| oligoribonuclease [Escherichia coli KTE156]
gi|431229481|gb|ELF26130.1| oligoribonuclease [Escherichia coli KTE162]
gi|431233147|gb|ELF28740.1| oligoribonuclease [Escherichia coli KTE161]
gi|431238835|gb|ELF33490.1| oligoribonuclease [Escherichia coli KTE169]
gi|431248206|gb|ELF42409.1| oligoribonuclease [Escherichia coli KTE171]
gi|431250205|gb|ELF44352.1| oligoribonuclease [Escherichia coli KTE8]
gi|431253241|gb|ELF46720.1| oligoribonuclease [Escherichia coli KTE6]
gi|431269598|gb|ELF60908.1| oligoribonuclease [Escherichia coli KTE17]
gi|431278126|gb|ELF69128.1| oligoribonuclease [Escherichia coli KTE18]
gi|431279468|gb|ELF70427.1| oligoribonuclease [Escherichia coli KTE45]
gi|431287569|gb|ELF78379.1| oligoribonuclease [Escherichia coli KTE23]
gi|431288533|gb|ELF79296.1| oligoribonuclease [Escherichia coli KTE43]
gi|431288772|gb|ELF79530.1| oligoribonuclease [Escherichia coli KTE42]
gi|431292556|gb|ELF82944.1| oligoribonuclease [Escherichia coli KTE29]
gi|431297971|gb|ELF87606.1| oligoribonuclease [Escherichia coli KTE22]
gi|431304073|gb|ELF92610.1| oligoribonuclease [Escherichia coli KTE46]
gi|431314736|gb|ELG02669.1| oligoribonuclease [Escherichia coli KTE48]
gi|431321056|gb|ELG08679.1| oligoribonuclease [Escherichia coli KTE50]
gi|431322858|gb|ELG10441.1| oligoribonuclease [Escherichia coli KTE54]
gi|431332491|gb|ELG19713.1| oligoribonuclease [Escherichia coli KTE59]
gi|431334151|gb|ELG21322.1| oligoribonuclease [Escherichia coli KTE65]
gi|431343485|gb|ELG30443.1| oligoribonuclease [Escherichia coli KTE78]
gi|431346919|gb|ELG33813.1| oligoribonuclease [Escherichia coli KTE79]
gi|431351630|gb|ELG38416.1| oligoribonuclease [Escherichia coli KTE91]
gi|431358983|gb|ELG45628.1| oligoribonuclease [Escherichia coli KTE115]
gi|431371855|gb|ELG57559.1| oligoribonuclease [Escherichia coli KTE118]
gi|431376389|gb|ELG61711.1| oligoribonuclease [Escherichia coli KTE123]
gi|431381357|gb|ELG65988.1| oligoribonuclease [Escherichia coli KTE135]
gi|431390027|gb|ELG73736.1| oligoribonuclease [Escherichia coli KTE136]
gi|431396234|gb|ELG79720.1| oligoribonuclease [Escherichia coli KTE144]
gi|431399271|gb|ELG82679.1| oligoribonuclease [Escherichia coli KTE141]
gi|431406513|gb|ELG89733.1| oligoribonuclease [Escherichia coli KTE147]
gi|431410032|gb|ELG93195.1| oligoribonuclease [Escherichia coli KTE146]
gi|431415976|gb|ELG98468.1| oligoribonuclease [Escherichia coli KTE154]
gi|431421994|gb|ELH04190.1| oligoribonuclease [Escherichia coli KTE158]
gi|431427834|gb|ELH09777.1| oligoribonuclease [Escherichia coli KTE165]
gi|431432261|gb|ELH14032.1| oligoribonuclease [Escherichia coli KTE192]
gi|431438926|gb|ELH20296.1| oligoribonuclease [Escherichia coli KTE194]
gi|431449958|gb|ELH30523.1| oligoribonuclease [Escherichia coli KTE190]
gi|431450604|gb|ELH31090.1| oligoribonuclease [Escherichia coli KTE173]
gi|431450998|gb|ELH31475.1| oligoribonuclease [Escherichia coli KTE175]
gi|431458579|gb|ELH38903.1| oligoribonuclease [Escherichia coli KTE184]
gi|431459080|gb|ELH39398.1| oligoribonuclease [Escherichia coli KTE183]
gi|431465643|gb|ELH45725.1| oligoribonuclease [Escherichia coli KTE196]
gi|431475288|gb|ELH55092.1| oligoribonuclease [Escherichia coli KTE203]
gi|431476036|gb|ELH55832.1| oligoribonuclease [Escherichia coli KTE197]
gi|431484111|gb|ELH63792.1| oligoribonuclease [Escherichia coli KTE209]
gi|431484983|gb|ELH64654.1| oligoribonuclease [Escherichia coli KTE202]
gi|431488545|gb|ELH68178.1| oligoribonuclease [Escherichia coli KTE207]
gi|431491526|gb|ELH71131.1| oligoribonuclease [Escherichia coli KTE215]
gi|431500409|gb|ELH79424.1| oligoribonuclease [Escherichia coli KTE211]
gi|431501354|gb|ELH80338.1| oligoribonuclease [Escherichia coli KTE217]
gi|431512481|gb|ELH90605.1| oligoribonuclease [Escherichia coli KTE218]
gi|431519707|gb|ELH97138.1| oligoribonuclease [Escherichia coli KTE229]
gi|431520252|gb|ELH97678.1| oligoribonuclease [Escherichia coli KTE227]
gi|431525177|gb|ELI01980.1| oligoribonuclease [Escherichia coli KTE104]
gi|431525941|gb|ELI02715.1| oligoribonuclease [Escherichia coli KTE105]
gi|431528764|gb|ELI05470.1| oligoribonuclease [Escherichia coli KTE106]
gi|431538802|gb|ELI14785.1| oligoribonuclease [Escherichia coli KTE109]
gi|431544616|gb|ELI19432.1| oligoribonuclease [Escherichia coli KTE112]
gi|431546591|gb|ELI20985.1| oligoribonuclease [Escherichia coli KTE113]
gi|431550869|gb|ELI24857.1| oligoribonuclease [Escherichia coli KTE117]
gi|431560466|gb|ELI33979.1| oligoribonuclease [Escherichia coli KTE120]
gi|431564082|gb|ELI37265.1| oligoribonuclease [Escherichia coli KTE122]
gi|431564357|gb|ELI37532.1| oligoribonuclease [Escherichia coli KTE124]
gi|431577021|gb|ELI49678.1| oligoribonuclease [Escherichia coli KTE125]
gi|431577526|gb|ELI50159.1| oligoribonuclease [Escherichia coli KTE128]
gi|431580671|gb|ELI53229.1| oligoribonuclease [Escherichia coli KTE129]
gi|431591795|gb|ELI62705.1| oligoribonuclease [Escherichia coli KTE131]
gi|431596670|gb|ELI66621.1| oligoribonuclease [Escherichia coli KTE133]
gi|431599021|gb|ELI68805.1| oligoribonuclease [Escherichia coli KTE137]
gi|431611006|gb|ELI80288.1| oligoribonuclease [Escherichia coli KTE139]
gi|431614065|gb|ELI83228.1| oligoribonuclease [Escherichia coli KTE145]
gi|431622105|gb|ELI90890.1| oligoribonuclease [Escherichia coli KTE148]
gi|431623071|gb|ELI91751.1| oligoribonuclease [Escherichia coli KTE150]
gi|431628974|gb|ELI97343.1| oligoribonuclease [Escherichia coli KTE153]
gi|431637519|gb|ELJ05580.1| oligoribonuclease [Escherichia coli KTE157]
gi|431640858|gb|ELJ08611.1| oligoribonuclease [Escherichia coli KTE163]
gi|431652561|gb|ELJ19711.1| oligoribonuclease [Escherichia coli KTE166]
gi|431655926|gb|ELJ22955.1| oligoribonuclease [Escherichia coli KTE168]
gi|431668734|gb|ELJ35247.1| oligoribonuclease [Escherichia coli KTE176]
gi|431671758|gb|ELJ38034.1| oligoribonuclease [Escherichia coli KTE177]
gi|431681969|gb|ELJ47739.1| oligoribonuclease [Escherichia coli KTE179]
gi|431682514|gb|ELJ48279.1| oligoribonuclease [Escherichia coli KTE180]
gi|431685331|gb|ELJ50905.1| oligoribonuclease [Escherichia coli KTE232]
gi|431696774|gb|ELJ61928.1| oligoribonuclease [Escherichia coli KTE82]
gi|431700078|gb|ELJ65064.1| oligoribonuclease [Escherichia coli KTE85]
gi|431700218|gb|ELJ65201.1| oligoribonuclease [Escherichia coli KTE88]
gi|431712023|gb|ELJ76326.1| oligoribonuclease [Escherichia coli KTE90]
gi|431715384|gb|ELJ79548.1| oligoribonuclease [Escherichia coli KTE94]
gi|431727220|gb|ELJ90982.1| oligoribonuclease [Escherichia coli KTE97]
gi|431730287|gb|ELJ93854.1| oligoribonuclease [Escherichia coli KTE99]
gi|432345444|gb|ELL39949.1| oligoribonuclease [Escherichia coli J96]
gi|441609181|emb|CCP95178.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441652258|emb|CCQ02227.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|443420186|gb|AGC85090.1| oligoribonuclease [Escherichia coli APEC O78]
gi|449312637|gb|EMD02888.1| oligoribonuclease [Escherichia coli O08]
gi|449313095|gb|EMD03322.1| oligoribonuclease [Escherichia coli S17]
gi|449315015|gb|EMD05169.1| oligoribonuclease [Escherichia coli SEPT362]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|37528414|ref|NP_931759.1| oligoribonuclease [Photorhabdus luminescens subsp. laumondii TTO1]
gi|41017433|sp|Q7MYS8.1|ORN_PHOLL RecName: Full=Oligoribonuclease
gi|36787852|emb|CAE16967.1| oligoribonuclease [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILDEGPVIAVHQSDEQLALMDKWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAEK +EF++K V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASKIDDREAEKATIEFLEKWVPAGASPICGNSVSQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGL-KKQNTHQALDDIRESVAELAYYREHFIQ 180
>gi|158428766|pdb|2IGI|A Chain A, Crystal Structure Of E. Coli Oligoribonuclease
gi|158428767|pdb|2IGI|B Chain B, Crystal Structure Of E. Coli Oligoribonuclease
Length = 180
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 7 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 67 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 127 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 179
>gi|331005310|ref|ZP_08328699.1| Oligoribonuclease [gamma proteobacterium IMCC1989]
gi|330420886|gb|EGG95163.1| Oligoribonuclease [gamma proteobacterium IMCC1989]
Length = 180
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL D I+EIA I+TD L EGP L IHQ+ E L +M EW N H
Sbjct: 7 LIWIDLEMTGLYPNDDVIIEIATIVTDSDLNILAEGPMLAIHQSDERLAAMDEWNTNQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V +S ++ +AE+Q ++F+K+ V ++GNS+ D FL YMP L + F
Sbjct: 67 KSGLTERVRNSNISASDAEQQTIDFLKQWVPAGKSPMSGNSICQDRRFLANYMPALENYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSS+K L RW P + +K H ALDD+R+SI ELK+Y++ F
Sbjct: 127 HYRNLDVSSVKELARRWKPESMKGF-TKSGAHLALDDVRDSINELKHYRKTFF 178
>gi|111221205|ref|YP_711999.1| oligoribonuclease [Frankia alni ACN14a]
gi|111148737|emb|CAJ60413.1| Oligoribonuclease [Frankia alni ACN14a]
Length = 256
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D +LE+AC++TD +L EG DLVI E L++M + H+
Sbjct: 18 LVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIDLVISAPDEALEAMVPVVREMHQ 77
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
+SGLT V S LT +A+ QV+++V+ V L GNS+ D FL +YMP L +
Sbjct: 78 SSGLTAAVRASTLTLADAQAQVLDYVRARVPEVRKAPLCGNSIATDRTFLARYMPALDAH 137
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWY R Y P K HRAL DI+ESI EL+YY++ +F
Sbjct: 138 LHYRMIDVSSIKELARRWYVRTYYAAPVKRGGHRALADIQESIEELRYYRQALF 191
>gi|452124327|ref|ZP_21936911.1| oligoribonuclease [Bordetella holmesii F627]
gi|452127724|ref|ZP_21940304.1| oligoribonuclease [Bordetella holmesii H558]
gi|451923557|gb|EMD73698.1| oligoribonuclease [Bordetella holmesii F627]
gi|451926593|gb|EMD76726.1| oligoribonuclease [Bordetella holmesii H558]
Length = 181
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQDDSVLDAMDNWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE+Q++EF+ ++V L GN++ D F+ YMP L F
Sbjct: 68 KSGLIDKVRASTLTEAQAEQQLIEFLAQHVPAGKSPLCGNTISQDRRFMFAYMPALERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELKYY+E+ K
Sbjct: 128 HYRNLDVSTLKELARRWAPAVYKGF-EKKSRHEALADIYESIDELKYYREHFLKV 181
>gi|269219723|ref|ZP_06163577.1| oligoribonuclease [Actinomyces sp. oral taxon 848 str. F0332]
gi|269210965|gb|EEZ77305.1| oligoribonuclease [Actinomyces sp. oral taxon 848 str. F0332]
Length = 214
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
P+VWID EMTGL + VD ++E+A +ITD +L EG D++I + ++ MG++ + H
Sbjct: 4 PIVWIDCEMTGLDLNVDELVEVAVVITDSELNPVDEGIDVLIRPSDAAVEHMGDFVRQMH 63
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLA 187
ASGL ++ +GLT EA +QV+ ++++++ PL GNSV D FL+KYMPD+
Sbjct: 64 TASGLIEE-WKNGLTLEEAREQVLAYIRRHIPEAQKAPL-GGNSVGTDKAFLEKYMPDVV 121
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ + L+DVSS+K L RWYPR Y P K HRAL DI +SI EL YY++ +
Sbjct: 122 AHLHYRLIDVSSLKELAKRWYPRTYFAAPEKTGNHRALGDIYDSIDELHYYRDALM 177
>gi|340709024|ref|XP_003393116.1| PREDICTED: probable oligoribonuclease-like [Bombus terrestris]
Length = 186
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 110/173 (63%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID E+TGL IE D ILEIAC+ITD L E ++VI+Q L++M EWC N H
Sbjct: 9 IVWIDTELTGLNIEKDTILEIACLITDKDLNIISEEFNVVINQPDVVLENMNEWCTNWHI 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL +K S + + E+ ++ +K + + + LAGN+VY+D +FL K+MP +
Sbjct: 69 KTGLIEKSKCSKFSLTDVEQMLLNLLKNYIPSKSCPLAGNTVYMDRLFLLKFMPLVNDYL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++D S IK L RW P Y+ +P K+ HRAL DI+ESI ELKYYK NIF
Sbjct: 129 HYRIIDCSVIKELVRRWNPTIYKNMPEKKLCHRALSDIKESINELKYYKTNIF 181
>gi|417584574|ref|ZP_12235358.1| exonuclease family protein [Escherichia coli STEC_C165-02]
gi|419919372|ref|ZP_14437528.1| oligoribonuclease [Escherichia coli KD2]
gi|432491998|ref|ZP_19733851.1| oligoribonuclease [Escherichia coli KTE213]
gi|432716796|ref|ZP_19951805.1| oligoribonuclease [Escherichia coli KTE9]
gi|432837263|ref|ZP_20070761.1| oligoribonuclease [Escherichia coli KTE140]
gi|433205926|ref|ZP_20389658.1| oligoribonuclease [Escherichia coli KTE95]
gi|345342757|gb|EGW75149.1| exonuclease family protein [Escherichia coli STEC_C165-02]
gi|388388053|gb|EIL49650.1| oligoribonuclease [Escherichia coli KD2]
gi|431015732|gb|ELD29282.1| oligoribonuclease [Escherichia coli KTE213]
gi|431269176|gb|ELF60535.1| oligoribonuclease [Escherichia coli KTE9]
gi|431393076|gb|ELG76641.1| oligoribonuclease [Escherichia coli KTE140]
gi|431714519|gb|ELJ78705.1| oligoribonuclease [Escherichia coli KTE95]
Length = 181
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPAILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|343505862|ref|ZP_08743405.1| oligoribonuclease [Vibrio ichthyoenteri ATCC 700023]
gi|342805550|gb|EGU40808.1| oligoribonuclease [Vibrio ichthyoenteri ATCC 700023]
Length = 181
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP L IHQ + L+ M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPESELEKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +++ +S + E+EA +Q + F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 NSGLVERIRNSSVDEQEAIRQTIAFLEQWVPKGKSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P SK H ALDDIRESI EL+YY++ IF
Sbjct: 128 HYRYVDVSTLKELTRRWQPEVLDGF-SKSGSHLALDDIRESIAELQYYRKTIF 179
>gi|418050871|ref|ZP_12688957.1| Oligoribonuclease [Mycobacterium rhodesiae JS60]
gi|353188495|gb|EHB54016.1| Oligoribonuclease [Mycobacterium rhodesiae JS60]
Length = 211
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD +L +G D+VIH E L+ M E H
Sbjct: 5 LVWIDCEMTGLDLRTDKLIEIAALVTDAELNVLGDGIDVVIHADDEALNGMIEVVAQMHH 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L S
Sbjct: 65 RSGLTEEVRTSTVDVASAEQLVLDYIRTHVKQAKTAPLAGNSIATDRGFIARDMPALDSY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI ELKYY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYYGQPEKGLAHRALADIQESIRELKYYRATAF 178
>gi|329120336|ref|ZP_08249004.1| oligoribonuclease [Neisseria bacilliformis ATCC BAA-1200]
gi|327462677|gb|EGF09000.1| oligoribonuclease [Neisseria bacilliformis ATCC BAA-1200]
Length = 184
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L W+D+EMTGL E DRI+E+A IITD L + P +HQ+ E LD+M EWC H
Sbjct: 9 LCWLDMEMTGLSPETDRIIEVAVIITDSDLNVLAQSPVYAVHQSDEVLDAMDEWCTATHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT++V S TE E E+ +++F+ + + GNSV+ D F++KYMP L + F
Sbjct: 69 RTGLTQRVRESQYTEAEVEQNLLDFIAAWIPAQASPMCGNSVHQDRRFMQKYMPRLEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + V K H+ALDDI ESI E++YY+++ K
Sbjct: 129 HYRNLDVSTLKELAKRWNPAVAKGV-VKRGSHKALDDILESIEEMRYYRDHFLK 181
>gi|305680783|ref|ZP_07403590.1| oligoribonuclease [Corynebacterium matruchotii ATCC 14266]
gi|305658988|gb|EFM48488.1| oligoribonuclease [Corynebacterium matruchotii ATCC 14266]
Length = 209
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWIDLEMTGL I I+E+A +ITD L EG D+V+H ++E L M E+ N HE
Sbjct: 10 IVWIDLEMTGLDIHEHTIVEVAALITDADLNVLGEGVDVVVHASEEELGQMNEFVTNMHE 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
+SGL ++ S +T +EAE V+E + K+ P LAGNS+ D F+++YMP L
Sbjct: 70 SSGLLAEIRESKVTLKEAEDAVLELIAKHCDLEHPAPLAGNSIGTDRGFIREYMPRLDEA 129
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS++K L RW PR Y P K+ HRAL DI ESI EL +Y+ +F N
Sbjct: 130 LHYRMIDVSTVKELARRWAPRVYYHQPEKDMSHRALADIVESIRELDFYRRVLFVAN 186
>gi|54310437|ref|YP_131457.1| oligoribonuclease [Photobacterium profundum SS9]
gi|59798036|sp|Q6LM23.1|ORN_PHOPR RecName: Full=Oligoribonuclease
gi|46914878|emb|CAG21655.1| putative oligoribonuclease [Photobacterium profundum SS9]
Length = 181
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E+ +I+EIA I+TD +L EGP L IHQ++ L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPEIHQIIEIATIVTDAQLNILAEGPVLAIHQSEAELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +++ S TE +A +Q + F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 NSGLVERIRQSKFTEEDAIRQTIAFLEQWVPKGASPICGNSIGQDRRFLYKHMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P SK+ H ALDDI +SI EL+YY+E+IF
Sbjct: 128 HYRYLDVSTIKELTRRWQPELLEGF-SKKGSHLALDDIHDSIAELRYYREHIF 179
>gi|407642785|ref|YP_006806544.1| oligoribonuclease [Nocardia brasiliensis ATCC 700358]
gi|407305669|gb|AFT99569.1| oligoribonuclease [Nocardia brasiliensis ATCC 700358]
Length = 216
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D EMTGL+++ D+++E+A ++TD L +G D+VIH L +M + H
Sbjct: 6 VVWMDCEMTGLRLDSDKLIEVAALVTDSDLNILGDGVDIVIHADDAALAAMPPVVVDMHA 65
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE+QV++++++ V T T LAGNS+ D F+ + MP L +
Sbjct: 66 RSGLTEEVRRSAVTMAEAEEQVLDYIRQYVPTPRTVPLAGNSIATDRGFIARDMPALDAH 125
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 126 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLTHRALADIKESIRELEYYRRTAF 179
>gi|81248005|gb|ABB68713.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 204
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 31 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 90
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 91 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 150
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 151 HYRYLDVSTLKELARRWKPEILDSF-TKQGTHQAMDDIRESVAELAYYREHFIK 203
>gi|229494052|ref|ZP_04387821.1| oligoribonuclease [Rhodococcus erythropolis SK121]
gi|226186467|dbj|BAH34571.1| oligoribonuclease [Rhodococcus erythropolis PR4]
gi|229319121|gb|EEN84973.1| oligoribonuclease [Rhodococcus erythropolis SK121]
Length = 202
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL++E D+++EIA ++TD L EG D+VIH + L +M + + H
Sbjct: 8 LVWIDCEMTGLRLESDKLIEIAALVTDSDLNILGEGVDIVIHADDDALAAMPDVVKKMHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAEK+V+ +++K+V T LAGNS+ D F+ + M L +
Sbjct: 68 KSGLTEEVRKSTVTLAEAEKEVLAYIRKHVPVAGTAPLAGNSIATDRGFISRDMTALDTY 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DI+ESI ELKYY+ F
Sbjct: 128 LHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIKESIRELKYYRGTAF 181
>gi|432509950|ref|ZP_19748814.1| oligoribonuclease [Escherichia coli KTE220]
gi|432649090|ref|ZP_19884862.1| oligoribonuclease [Escherichia coli KTE87]
gi|432781602|ref|ZP_20015796.1| oligoribonuclease [Escherichia coli KTE63]
gi|432997872|ref|ZP_20186447.1| oligoribonuclease [Escherichia coli KTE223]
gi|433127849|ref|ZP_20313379.1| oligoribonuclease [Escherichia coli KTE160]
gi|433141922|ref|ZP_20327149.1| oligoribonuclease [Escherichia coli KTE167]
gi|433151874|ref|ZP_20336860.1| oligoribonuclease [Escherichia coli KTE174]
gi|442606162|ref|ZP_21020963.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli Nissle 1917]
gi|431033982|gb|ELD45931.1| oligoribonuclease [Escherichia coli KTE220]
gi|431195212|gb|ELE94418.1| oligoribonuclease [Escherichia coli KTE87]
gi|431333451|gb|ELG20664.1| oligoribonuclease [Escherichia coli KTE63]
gi|431518787|gb|ELH96240.1| oligoribonuclease [Escherichia coli KTE223]
gi|431638592|gb|ELJ06622.1| oligoribonuclease [Escherichia coli KTE160]
gi|431654062|gb|ELJ21134.1| oligoribonuclease [Escherichia coli KTE167]
gi|431666078|gb|ELJ32782.1| oligoribonuclease [Escherichia coli KTE174]
gi|441712767|emb|CCQ06940.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli Nissle 1917]
Length = 181
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEHLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|91213714|ref|YP_543700.1| oligoribonuclease [Escherichia coli UTI89]
gi|237703830|ref|ZP_04534311.1| oligoribonuclease [Escherichia sp. 3_2_53FAA]
gi|332280947|ref|ZP_08393360.1| oligoribonuclease [Shigella sp. D9]
gi|386278835|ref|ZP_10056528.1| oligoribonuclease [Escherichia sp. 4_1_40B]
gi|26111489|gb|AAN83671.1|AE016771_182 Oligoribonuclease [Escherichia coli CFT073]
gi|91075288|gb|ABE10169.1| oligoribonuclease [Escherichia coli UTI89]
gi|226901742|gb|EEH88001.1| oligoribonuclease [Escherichia sp. 3_2_53FAA]
gi|332103299|gb|EGJ06645.1| oligoribonuclease [Shigella sp. D9]
gi|386124026|gb|EIG72610.1| oligoribonuclease [Escherichia sp. 4_1_40B]
Length = 220
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 47 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 106
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 107 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 166
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 167 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 219
>gi|406908075|gb|EKD48697.1| hypothetical protein ACD_64C00179G0002 [uncultured bacterium]
Length = 180
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 107/179 (59%)
Query: 65 FEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEW 124
E + LVWIDLEMTGL DRI+EIA +ITD LT EGP +I L SM
Sbjct: 1 MEREARLVWIDLEMTGLNPAKDRIIEIATVITDDTLTLIEEGPSRIIQCDDSFLRSMSSQ 60
Query: 125 CQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMP 184
H SGL +KV S ++ ++AE+ F+K + + +L GNS++ D MFL+ YMP
Sbjct: 61 VVEMHTKSGLLEKVRASDVSLQQAERDTAAFIKSHCSSGKSVLCGNSIWTDRMFLQAYMP 120
Query: 185 DLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ L + ++DV+S+K L RWYP D +K + HRALDDIRESI ELK+Y+ F
Sbjct: 121 RVTELLHYRMIDVTSVKELVARWYPNDPDVEYNKRETHRALDDIRESIAELKHYRRYFF 179
>gi|359450011|ref|ZP_09239480.1| oligoribonuclease [Pseudoalteromonas sp. BSi20480]
gi|392536588|ref|ZP_10283725.1| oligoribonuclease [Pseudoalteromonas marina mano4]
gi|358044178|dbj|GAA75729.1| oligoribonuclease [Pseudoalteromonas sp. BSi20480]
Length = 181
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+W+DLEMTGL+ D+ILEIA ++TD L EGP + IHQ+ E L+ M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPATDKILEIATVVTDADLNILAEGPTIAIHQSDELLNGMDEWCTT 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT + S E A Q +EF+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTFDEEYAVAQTLEFLKQWVPAGASPMCGNSIGQDRRFMNKYMRELE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS+IK L RW P +V +K+ H ALDDI++SIMELK Y+E F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLAQV-NKKGSHLALDDIKDSIMELKVYREKFF 179
>gi|90022321|ref|YP_528148.1| oligoribonuclease [Saccharophagus degradans 2-40]
gi|89951921|gb|ABD81936.1| Exonuclease [Saccharophagus degradans 2-40]
Length = 181
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+EIA I+TD +L EGP L I Q K +D M EW N H
Sbjct: 8 LIWIDLEMTGLVPDRDVIIEIATIVTDAQLNVLAEGPMLAIAQPKAVMDGMDEWNTNQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++VL+S ++ AE+Q +EF+++ V + GNS+ D FL +YMP L + F
Sbjct: 68 KSGLTERVLNSAVSTAMAEQQTIEFLQQWVPAGKSPICGNSIGQDRRFLARYMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L +RW P +K+ H ALDDI++SI ELK+Y+E+ K
Sbjct: 128 HYRNLDVSTLKELAVRWKPEVLNGF-TKKGAHLALDDIKDSIAELKHYREHFIK 180
>gi|432600302|ref|ZP_19836559.1| oligoribonuclease [Escherichia coli KTE66]
gi|431144931|gb|ELE46620.1| oligoribonuclease [Escherichia coli KTE66]
Length = 181
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQADEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|300310766|ref|YP_003774858.1| oligoribonuclease [Herbaspirillum seropedicae SmR1]
gi|300073551|gb|ADJ62950.1| oligoribonuclease (3'->5' exoribonuclease) protein [Herbaspirillum
seropedicae SmR1]
Length = 189
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
+M L+W+D+EMTGL + DRI+E+A ++TD +L EGP L IHQ+ E LD M W +
Sbjct: 13 EMNLIWVDMEMTGLDPDKDRIIEVAVVVTDAELNVLGEGPVLAIHQSDELLDGMDAWNKG 72
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGL +V S +TE +AEKQ++EF+K+ V + GNS+ D F+ + MP L
Sbjct: 73 THGRSGLIDRVKASTVTEADAEKQIIEFLKQYVPAGKSPMCGNSICQDRRFMVRGMPKLE 132
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
F + +DVS++K LC RW P K Q H AL DI ESI ELKYY+E+ K
Sbjct: 133 EFFHYRNLDVSTLKELCKRWKPEIATGF-KKRQMHTALADILESIEELKYYREHFIK 188
>gi|172041073|ref|YP_001800787.1| oligoribonuclease [Corynebacterium urealyticum DSM 7109]
gi|171852377|emb|CAQ05353.1| putative oligoribonuclease [Corynebacterium urealyticum DSM 7109]
Length = 209
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW D EMTGL + ++EIA I+TD +L EG DLVIH T++ L M ++ QN H
Sbjct: 13 IVWADCEMTGLDPDRHVLVEIAVIVTDAELRPLDEGIDLVIHATEDELAEMDDFVQNMHA 72
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT+++ S L+ EAE+QV+E+V++ V LAGNS+ D F+ KYMP L
Sbjct: 73 RSGLTEQIRESTLSLAEAEQQVLEYVQRYVEVERAAPLAGNSIGTDRRFIAKYMPKLDEF 132
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYP+ Y P K HRAL DI+ESI EL +Y+ I
Sbjct: 133 LHYRMIDVSSIKELARRWYPKVYAGQPQKGLSHRALADIQESIQELAFYRHAIM 186
>gi|375096572|ref|ZP_09742837.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
marina XMU15]
gi|374657305|gb|EHR52138.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
marina XMU15]
Length = 202
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD L EG DLVIH E L +M + + H
Sbjct: 5 LVWIDCEMTGLDLAKDALIEIAVLVTDADLRVLGEGLDLVIHAGDEALANMPDVVREMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE++ +E+V++ V T LAGNSV D FL + MP+L +
Sbjct: 65 RSGLTEEVRRSTVTIDEAERRALEYVREYVPDPQTAPLAGNSVATDRGFLARDMPELDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSVKELVRRWYPRIYYAKPDKGLAHRALADIKESIGELEYYRRTAF 178
>gi|322514990|ref|ZP_08068002.1| oligoribonuclease [Actinobacillus ureae ATCC 25976]
gi|322119043|gb|EFX91207.1| oligoribonuclease [Actinobacillus ureae ATCC 25976]
Length = 183
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ + L+ M +WC H
Sbjct: 9 LIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLTVHQPDDLLNKMSDWCIKTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL ++V S LTER E Q ++F+K+ + + GNSV D FL KYMPDLA F
Sbjct: 69 ENGLIERVKQSKLTERAVELQTLDFLKRWLPKGASPICGNSVPQDKRFLYKYMPDLADYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L W P + +K+ H ALDDIRESI ELK+Y+ + K +
Sbjct: 129 HYRHLDVSTLKELARHWKPEILDQF-TKKNTHLALDDIRESIEELKFYRTHFIKLD 183
>gi|149197758|ref|ZP_01874808.1| oligoribonuclease [Lentisphaera araneosa HTCC2155]
gi|149139328|gb|EDM27731.1| oligoribonuclease [Lentisphaera araneosa HTCC2155]
Length = 184
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL + D+I+EIA ++TD +L +GP L+IHQ+ E +++M +WC HH
Sbjct: 7 LVWMDLEMTGLNPDNDKIIEIATLVTDSELNIIAKGPCLIIHQSDEVMNNMNDWCIKHHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT+ V S +++ EA +Q +F+ + L GNS+ D MFL K+MPD+ +
Sbjct: 67 ESGLTQAVKESTVSQEEACRQTRDFILEFCEKGRAPLCGNSIGQDRMFLTKHMPDIIDVL 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
+ +VDVSS+K L RWY + + +K+ HRALDDI ESI ELK+Y+E
Sbjct: 127 HYRVVDVSSMKELFNRWYGQK-KSYFTKKTSHRALDDIIESIEELKFYRE 175
>gi|300949122|ref|ZP_07163165.1| exonuclease [Escherichia coli MS 116-1]
gi|300451432|gb|EFK15052.1| exonuclease [Escherichia coli MS 116-1]
Length = 199
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL +E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 26 LIWIDLEMTGLDLERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 86 SSGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|78484978|ref|YP_390903.1| oligoribonuclease [Thiomicrospira crunogena XCL-2]
gi|123555812|sp|Q31HZ4.1|ORN_THICR RecName: Full=Oligoribonuclease
gi|78363264|gb|ABB41229.1| Exonuclease [Thiomicrospira crunogena XCL-2]
Length = 184
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA ++TD +L EGP + I + LD M WC HH
Sbjct: 7 LIWIDLEMTGLDHKADQIIEIATVVTDAELNVLAEGPVMAIQTEQHYLDGMDAWCTTHHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK+V S +T +AE++ ++F+K V + GNS+ D FL + MP+L F
Sbjct: 67 NSGLTKRVQESTITMAQAEQETIKFLKPYVPKGKSPMCGNSICQDRRFLIEQMPELEQFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSS+K L RW P Y K+ H ALDDI ESI ELKYY++N+F
Sbjct: 127 HYRNLDVSSLKELARRWAPTVYSGY-KKKGAHLALDDIYESIEELKYYRQNLF 178
>gi|307206938|gb|EFN84782.1| Probable oligoribonuclease [Harpegnathos saltator]
Length = 180
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 113/177 (63%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+ + L+MTGL IE D ILEIAC++TD L E ++VIHQ L++M +WC +H+
Sbjct: 4 LIILFLQMTGLNIEKDHILEIACVVTDEALKIISEELNIVIHQPDTILNNMHQWCMKNHK 63
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL + S ++ +EAE V+ F+KK V LAGN+VY+D +FL KYMP +
Sbjct: 64 INGLINESRSSKISLKEAETTVLNFLKKYVPKRKCPLAGNTVYMDRLFLYKYMPSVNEYL 123
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ ++DVSS+K L RW Y P+K+ KHRALDDI+ESI EL +YK+ F+ L
Sbjct: 124 HYRIIDVSSLKELHRRWSSNVYITAPTKKLKHRALDDIKESISELAHYKKYTFEAEL 180
>gi|91784777|ref|YP_559983.1| oligoribonuclease [Burkholderia xenovorans LB400]
gi|122970228|sp|Q13VF8.1|ORN_BURXL RecName: Full=Oligoribonuclease
gi|91688731|gb|ABE31931.1| Oligoribonuclease [Burkholderia xenovorans LB400]
Length = 207
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 112/184 (60%), Gaps = 2/184 (1%)
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
Q PL M LVW+D+EMTGL+ + DRI+EIA ++T+ L + VEGP L IHQ+ E L
Sbjct: 10 QPPL-VRSDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLA 68
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFL 179
M +W QN H SGL +V S ++E +A +Q+ +F+ V + GNS+ D F+
Sbjct: 69 GMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNSICQDRRFM 128
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
++MP+L F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+
Sbjct: 129 ARWMPELERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYR 187
Query: 240 ENIF 243
E+
Sbjct: 188 EHFL 191
>gi|289706257|ref|ZP_06502619.1| exonuclease [Micrococcus luteus SK58]
gi|289556980|gb|EFD50309.1| exonuclease [Micrococcus luteus SK58]
Length = 208
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL +VD ++E+A +ITD +L EG DLVI + L+ M + ++ H
Sbjct: 13 PLVWIDCEMTGLHPQVDELVEVAVLITDAELNILDEGIDLVIRPSAAALEQMDPFVRDMH 72
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL + L GL +A +V+E++ V LLAGN+V D +FL +YMP +
Sbjct: 73 TTSGLLPE-LAEGLELDDAAARVLEYIAARVPAGKGLLAGNTVGQDKLFLARYMPAVVDH 131
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVS++K L RWYPR Y + P+K HRAL DI++SI EL+YY+ +
Sbjct: 132 LHYRIVDVSTVKELARRWYPRAYYQAPAKTGGHRALGDIKDSITELRYYRAAVM 185
>gi|194910229|ref|XP_001982095.1| GG12405 [Drosophila erecta]
gi|190656733|gb|EDV53965.1| GG12405 [Drosophila erecta]
Length = 184
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 104/174 (59%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+DLEMTGL IE D+ILE++CIITD L E I+ +E D+M +WC H
Sbjct: 11 IVWMDLEMTGLDIEKDKILEVSCIITDKDLNVKSEATCFAINHPQEVYDTMNDWCMEQHY 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S + +A V+ ++++NV L GNSVY+D +F++K MP +
Sbjct: 71 KSGLVDRCKSSDVKPEQASNLVLSYLERNVPKRACPLGGNSVYMDRLFIRKCMPLVDDYL 130
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +VDVS+IK L RW P P K HR++DDI ESI EL YYK+N FK
Sbjct: 131 HYRIVDVSTIKELVRRWRPELLSSAPKKTFTHRSMDDIMESINELNYYKKNFFK 184
>gi|300920814|ref|ZP_07137214.1| exonuclease [Escherichia coli MS 115-1]
gi|427807388|ref|ZP_18974455.1| hypothetical protein BN16_01871 [Escherichia coli chi7122]
gi|427811972|ref|ZP_18979037.1| hypothetical protein BN17_41421 [Escherichia coli]
gi|537006|gb|AAA97061.1| ORF_o204a [Escherichia coli str. K-12 substr. MG1655]
gi|73858127|gb|AAZ90834.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81243603|gb|ABB64313.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|115515635|gb|ABJ03710.1| oligoribonuclease [Escherichia coli APEC O1]
gi|300412206|gb|EFJ95516.1| exonuclease [Escherichia coli MS 115-1]
gi|358256845|dbj|GAA57984.1| oligoribonuclease [Clonorchis sinensis]
gi|412965570|emb|CCK49503.1| hypothetical protein BN16_01871 [Escherichia coli chi7122]
gi|412972151|emb|CCJ46822.1| hypothetical protein BN17_41421 [Escherichia coli]
Length = 204
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 31 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 90
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 91 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 150
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 151 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 203
>gi|422783479|ref|ZP_16836263.1| exonuclease [Escherichia coli TW10509]
gi|323975494|gb|EGB70595.1| exonuclease [Escherichia coli TW10509]
Length = 181
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVDRVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|388579592|gb|EIM19914.1| ribonuclease H-like protein [Wallemia sebi CBS 633.66]
Length = 229
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 115/181 (63%), Gaps = 7/181 (3%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVW+DLEMTGL + D ILEIA IITDG+L K +G L++ + K LD+M EWC + H
Sbjct: 36 PLVWVDLEMTGLDMNNDHILEIAIIITDGELNKVDDGISLIVKRPKTVLDNMNEWCISTH 95
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFL-----KKYM 183
SGLTK+VL S + + K E++K+ + ++AGN+V++D FL K+
Sbjct: 96 GLSGLTKQVLTSPFSHQTVSKVAYEYIKRWIPDPRISVIAGNTVHMDLRFLEMDAHKEGW 155
Query: 184 PDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+AS + +VDVSS K + RWYP K K KHRALDD++ SI ELKYY+++IF
Sbjct: 156 SRIASHLGYRVVDVSSFKEIAARWYPTLPLK-SKKTSKHRALDDVQASIDELKYYRQSIF 214
Query: 244 K 244
K
Sbjct: 215 K 215
>gi|153831492|ref|ZP_01984159.1| oligoribonuclease [Vibrio cholerae 623-39]
gi|148873026|gb|EDL71161.1| oligoribonuclease [Vibrio cholerae 623-39]
Length = 181
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 ASGLVARVRQSKVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ +FK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKTVFK 180
>gi|451340256|ref|ZP_21910755.1| 3'-to-5' oligoribonuclease (orn) [Amycolatopsis azurea DSM 43854]
gi|449416975|gb|EMD22670.1| 3'-to-5' oligoribonuclease (orn) [Amycolatopsis azurea DSM 43854]
Length = 202
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L EG D+VIH E LD M E + H
Sbjct: 5 LVWIDCEMTGLDLAKDALIEIAALVTDAELNVLGEGVDIVIHADDETLDGMPEVVREMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT++V S +T EAE++V+E+++ +V P LAGNS+ D F+ + MP L
Sbjct: 65 RSGLTEEVRRSTVTMEEAEQRVLEYIRAHVPEANVAP-LAGNSIATDRGFITRDMPALDG 123
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DI+ESI EL YY+ F
Sbjct: 124 HLHYRMVDVSSVKELVRRWYPRIYYAKPEKGLAHRALADIKESIGELDYYRRVAF 178
>gi|432365535|ref|ZP_19608682.1| oligoribonuclease [Escherichia coli KTE5]
gi|430882471|gb|ELC05609.1| oligoribonuclease [Escherichia coli KTE5]
Length = 181
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +D+S++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDISTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|331665829|ref|ZP_08366723.1| oligoribonuclease [Escherichia coli TA143]
gi|331056880|gb|EGI28874.1| oligoribonuclease [Escherichia coli TA143]
Length = 181
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAVDDIRESVAELAYYREHFIK 180
>gi|261342826|ref|ZP_05970684.1| oligoribonuclease [Enterobacter cancerogenus ATCC 35316]
gi|288314868|gb|EFC53806.1| oligoribonuclease [Enterobacter cancerogenus ATCC 35316]
Length = 181
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +REAE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVDRVKASTQGDREAELATLEFLKQWVPEGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|348171933|ref|ZP_08878827.1| oligoribonuclease [Saccharopolyspora spinosa NRRL 18395]
Length = 204
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 110/174 (63%), Gaps = 3/174 (1%)
Query: 72 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEA 131
+WID EMTGL + D ++EIA ++TD L EG D+VIH +E L M + + H+
Sbjct: 1 MWIDCEMTGLDLGKDALIEIAALVTDADLNILGEGVDIVIHADEEKLAGMPDVVREMHDR 60
Query: 132 SGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE++V++++++ V G PL AGNS+ D F+ + MP L +
Sbjct: 61 SGLTEEVRRSTVTLEEAEQRVLDYIRQYVPDGRSAPL-AGNSIATDRGFISRDMPRLDTH 119
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DIRESI EL YY+ F
Sbjct: 120 LHYRMVDVSSIKELCRRWYPRIYYAQPEKGLAHRALADIRESIRELAYYRRTAF 173
>gi|356960535|ref|ZP_09063517.1| oligoribonuclease [gamma proteobacterium SCGC AAA001-B15]
Length = 180
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E D I+EIA ++TD L EGP L IHQ + L+SM EW
Sbjct: 4 KTNLIWIDLEMTGLVPEKDIIIEIATVVTDANLNVLAEGPSLAIHQNNKYLESMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGL ++V S ++ EAEKQ ++FV K V T + GNS+ D FL YMP L
Sbjct: 64 QHNKSGLVQRVKESEISVNEAEKQTLDFVMKYVDPGTSPMCGNSICQDRRFLYNYMPKLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L +RW P D K+ KH AL DI +SI ELK+Y+E+
Sbjct: 124 KFFHYRHIDVSTLKELAVRWKP-DVVSTSFKQSKHLALSDIYDSINELKHYREHFI 178
>gi|171057672|ref|YP_001790021.1| oligoribonuclease [Leptothrix cholodnii SP-6]
gi|170775117|gb|ACB33256.1| Exonuclease RNase T and DNA polymerase III [Leptothrix cholodnii
SP-6]
Length = 187
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WID+EMTGL DR++EIA ++TD +LT VEGP + +HQ+ E LD M W + H
Sbjct: 14 LIWIDMEMTGLDPMTDRVIEIAVVVTDAQLTVRVEGPVIAVHQSDEVLDRMDAWNRGTHG 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + E +A+ Q++EF+K+ V T + GNS+ D F+ YMP L F
Sbjct: 74 KSGLTERVKASTIGEDQAQDQMIEFLKQYVSKKTSPMCGNSICQDRRFMANYMPRLEEFF 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P K QKH AL DI ESI EL YY++++
Sbjct: 134 HYRNLDVSTLKELARRWKPEIMDGF-KKHQKHTALADIHESIDELLYYRQHLL 185
>gi|347819999|ref|ZP_08873433.1| oligoribonuclease [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 192
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 109/190 (57%), Gaps = 2/190 (1%)
Query: 55 NQQNSQTPLEF-EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQ 113
+Q NS P + LVW+D EMTGL+ E DR+LEIA ++T L +EGP IHQ
Sbjct: 2 SQANSPNPPALAQSAQNLVWLDCEMTGLEPETDRLLEIAVVVTGPGLEPRIEGPVFAIHQ 61
Query: 114 TKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVY 173
LD M W Q H SGL KV S +TE EAE+Q++ F+ + V + GNS+
Sbjct: 62 PDALLDRMDAWNQGTHGRSGLIDKVKASTVTEEEAERQIIAFLSRYVPKGAAPMCGNSIG 121
Query: 174 VDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIM 233
D FL +YMPDL F + VDVS++K L RW P+ Y K ++H AL D+ ESI
Sbjct: 122 QDRRFLVRYMPDLERFFHYRNVDVSTLKELAKRWKPQAYTSF-KKTRRHTALADVHESID 180
Query: 234 ELKYYKENIF 243
EL +Y+ ++
Sbjct: 181 ELAHYRAHLL 190
>gi|375289240|ref|YP_005123781.1| oligoribonuclease [Corynebacterium pseudotuberculosis 3/99-5]
gi|387137150|ref|YP_005693130.1| oligoribonuclease [Corynebacterium pseudotuberculosis 42/02-A]
gi|348607595|gb|AEP70868.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 42/02-A]
gi|371576529|gb|AEX40132.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 3/99-5]
Length = 209
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 105/178 (58%), Gaps = 1/178 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL I+E+A +ITD L EG DLV+H T L M ++ HE
Sbjct: 11 LVWIDLEMTGLDTHRHVIVEVAALITDADLNILGEGVDLVVHATDAQLAEMDDYVTAMHE 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT+++ S ++ EAE V+E + K+ P LAGNS+ D F+ YMP L +
Sbjct: 71 NSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAGNSIATDRSFINAYMPRLDNA 130
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +VDVSS+K L RW PR Y P K HRAL DI ESI EL YY+ +FK +L
Sbjct: 131 LHYRMVDVSSVKELARRWAPRVYFNQPQKGMAHRALADIIESIRELAYYRRALFKEDL 188
>gi|15640368|ref|NP_229995.1| oligoribonuclease [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591589|ref|ZP_01678842.1| oligoribonuclease [Vibrio cholerae 2740-80]
gi|121730775|ref|ZP_01682865.1| oligoribonuclease [Vibrio cholerae V52]
gi|147673115|ref|YP_001218609.1| oligoribonuclease [Vibrio cholerae O395]
gi|227080553|ref|YP_002809104.1| oligoribonuclease [Vibrio cholerae M66-2]
gi|227116747|ref|YP_002818643.1| oligoribonuclease [Vibrio cholerae O395]
gi|229506863|ref|ZP_04396371.1| oligoribonuclease [Vibrio cholerae BX 330286]
gi|229508668|ref|ZP_04398162.1| oligoribonuclease [Vibrio cholerae B33]
gi|229516050|ref|ZP_04405501.1| oligoribonuclease [Vibrio cholerae RC9]
gi|229606377|ref|YP_002877025.1| oligoribonuclease [Vibrio cholerae MJ-1236]
gi|254851651|ref|ZP_05241001.1| oligoribonuclease [Vibrio cholerae MO10]
gi|255747141|ref|ZP_05421084.1| oligoribonuclease [Vibrio cholera CIRS 101]
gi|262149017|ref|ZP_06028162.1| oligoribonuclease [Vibrio cholerae INDRE 91/1]
gi|262166933|ref|ZP_06034653.1| oligoribonuclease [Vibrio cholerae RC27]
gi|298501303|ref|ZP_07011100.1| oligoribonuclease [Vibrio cholerae MAK 757]
gi|360036978|ref|YP_004938741.1| oligoribonuclease [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740221|ref|YP_005332190.1| oligoribonuclease [Vibrio cholerae IEC224]
gi|417811414|ref|ZP_12458077.1| oligoribonuclease [Vibrio cholerae HC-49A2]
gi|417815186|ref|ZP_12461822.1| oligoribonuclease [Vibrio cholerae HCUF01]
gi|418331047|ref|ZP_12942001.1| oligoribonuclease [Vibrio cholerae HC-06A1]
gi|418336206|ref|ZP_12945106.1| oligoribonuclease [Vibrio cholerae HC-23A1]
gi|418342585|ref|ZP_12949391.1| oligoribonuclease [Vibrio cholerae HC-28A1]
gi|418347749|ref|ZP_12952486.1| oligoribonuclease [Vibrio cholerae HC-43A1]
gi|419824810|ref|ZP_14348319.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|421315631|ref|ZP_15766204.1| oligoribonuclease [Vibrio cholerae CP1032(5)]
gi|421327569|ref|ZP_15778086.1| oligoribonuclease [Vibrio cholerae CP1042(15)]
gi|421330565|ref|ZP_15781048.1| oligoribonuclease [Vibrio cholerae CP1046(19)]
gi|421334163|ref|ZP_15784634.1| oligoribonuclease [Vibrio cholerae CP1048(21)]
gi|421338062|ref|ZP_15788503.1| oligoribonuclease [Vibrio cholerae HC-20A2]
gi|421345532|ref|ZP_15795919.1| oligoribonuclease [Vibrio cholerae HC-46A1]
gi|422890377|ref|ZP_16932809.1| oligoribonuclease [Vibrio cholerae HC-40A1]
gi|422901174|ref|ZP_16936560.1| oligoribonuclease [Vibrio cholerae HC-48A1]
gi|422905339|ref|ZP_16940204.1| oligoribonuclease [Vibrio cholerae HC-70A1]
gi|422905385|ref|ZP_16940245.1| oligoribonuclease [Vibrio cholerae HC-70A1]
gi|422912083|ref|ZP_16946617.1| oligoribonuclease [Vibrio cholerae HFU-02]
gi|422924559|ref|ZP_16957606.1| oligoribonuclease [Vibrio cholerae HC-38A1]
gi|423143612|ref|ZP_17131233.1| oligoribonuclease [Vibrio cholerae HC-19A1]
gi|423148593|ref|ZP_17135959.1| oligoribonuclease [Vibrio cholerae HC-21A1]
gi|423152371|ref|ZP_17139590.1| oligoribonuclease [Vibrio cholerae HC-22A1]
gi|423155185|ref|ZP_17142326.1| oligoribonuclease [Vibrio cholerae HC-32A1]
gi|423159027|ref|ZP_17146003.1| oligoribonuclease [Vibrio cholerae HC-33A2]
gi|423163704|ref|ZP_17150505.1| oligoribonuclease [Vibrio cholerae HC-48B2]
gi|423729721|ref|ZP_17703047.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|423746944|ref|ZP_17711237.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|423891433|ref|ZP_17725253.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|423926266|ref|ZP_17729870.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|424000888|ref|ZP_17743985.1| oligoribonuclease [Vibrio cholerae HC-17A2]
gi|424005046|ref|ZP_17748038.1| oligoribonuclease [Vibrio cholerae HC-37A1]
gi|424022842|ref|ZP_17762513.1| oligoribonuclease [Vibrio cholerae HC-62B1]
gi|424025861|ref|ZP_17765485.1| oligoribonuclease [Vibrio cholerae HC-69A1]
gi|424585240|ref|ZP_18024840.1| oligoribonuclease [Vibrio cholerae CP1030(3)]
gi|424589615|ref|ZP_18029068.1| oligoribonuclease [Vibrio cholerae CP1037(10)]
gi|424593864|ref|ZP_18033210.1| oligoribonuclease [Vibrio cholerae CP1040(13)]
gi|424597795|ref|ZP_18037001.1| oligoribonuclease [Vibrio Cholerae CP1044(17)]
gi|424600561|ref|ZP_18039724.1| oligoribonuclease [Vibrio cholerae CP1047(20)]
gi|424605494|ref|ZP_18044464.1| oligoribonuclease [Vibrio cholerae CP1050(23)]
gi|424609194|ref|ZP_18048059.1| oligoribonuclease [Vibrio cholerae HC-39A1]
gi|424615992|ref|ZP_18054689.1| oligoribonuclease [Vibrio cholerae HC-42A1]
gi|424620767|ref|ZP_18059300.1| oligoribonuclease [Vibrio cholerae HC-47A1]
gi|424643570|ref|ZP_18081330.1| oligoribonuclease [Vibrio cholerae HC-56A2]
gi|424651492|ref|ZP_18089022.1| oligoribonuclease [Vibrio cholerae HC-57A2]
gi|424655454|ref|ZP_18092763.1| oligoribonuclease [Vibrio cholerae HC-81A2]
gi|440712276|ref|ZP_20892899.1| oligoribonuclease [Vibrio cholerae 4260B]
gi|443502388|ref|ZP_21069386.1| oligoribonuclease [Vibrio cholerae HC-64A1]
gi|443506296|ref|ZP_21073098.1| oligoribonuclease [Vibrio cholerae HC-65A1]
gi|443510132|ref|ZP_21076809.1| oligoribonuclease [Vibrio cholerae HC-67A1]
gi|443513967|ref|ZP_21080517.1| oligoribonuclease [Vibrio cholerae HC-68A1]
gi|443517780|ref|ZP_21084208.1| oligoribonuclease [Vibrio cholerae HC-71A1]
gi|443522363|ref|ZP_21088617.1| oligoribonuclease [Vibrio cholerae HC-72A2]
gi|443529294|ref|ZP_21095313.1| oligoribonuclease [Vibrio cholerae HC-7A1]
gi|443534029|ref|ZP_21099956.1| oligoribonuclease [Vibrio cholerae HC-80A1]
gi|443536703|ref|ZP_21102562.1| oligoribonuclease [Vibrio cholerae HC-81A1]
gi|449054427|ref|ZP_21733095.1| 3'-to-5' oligoribonuclease (Orn) [Vibrio cholerae O1 str. Inaba
G4222]
gi|11133789|sp|Q9KV17.1|ORN_VIBCH RecName: Full=Oligoribonuclease
gi|172047716|sp|A5F3M7.1|ORN_VIBC3 RecName: Full=Oligoribonuclease
gi|9654757|gb|AAF93514.1| oligoribonuclease [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546555|gb|EAX56757.1| oligoribonuclease [Vibrio cholerae 2740-80]
gi|121627652|gb|EAX60322.1| oligoribonuclease [Vibrio cholerae V52]
gi|146314998|gb|ABQ19537.1| oligoribonuclease [Vibrio cholerae O395]
gi|227008441|gb|ACP04653.1| oligoribonuclease [Vibrio cholerae M66-2]
gi|227012197|gb|ACP08407.1| oligoribonuclease [Vibrio cholerae O395]
gi|229346953|gb|EEO11920.1| oligoribonuclease [Vibrio cholerae RC9]
gi|229354303|gb|EEO19232.1| oligoribonuclease [Vibrio cholerae B33]
gi|229355968|gb|EEO20887.1| oligoribonuclease [Vibrio cholerae BX 330286]
gi|229369032|gb|ACQ59455.1| oligoribonuclease [Vibrio cholerae MJ-1236]
gi|254847356|gb|EET25770.1| oligoribonuclease [Vibrio cholerae MO10]
gi|255735190|gb|EET90592.1| oligoribonuclease [Vibrio cholera CIRS 101]
gi|262024638|gb|EEY43319.1| oligoribonuclease [Vibrio cholerae RC27]
gi|262031207|gb|EEY49826.1| oligoribonuclease [Vibrio cholerae INDRE 91/1]
gi|297539994|gb|EFH76058.1| oligoribonuclease [Vibrio cholerae MAK 757]
gi|340044142|gb|EGR05096.1| oligoribonuclease [Vibrio cholerae HCUF01]
gi|340045549|gb|EGR06491.1| oligoribonuclease [Vibrio cholerae HC-49A2]
gi|341626016|gb|EGS51436.1| oligoribonuclease [Vibrio cholerae HC-70A1]
gi|341626071|gb|EGS51478.1| oligoribonuclease [Vibrio cholerae HC-70A1]
gi|341627548|gb|EGS52850.1| oligoribonuclease [Vibrio cholerae HC-48A1]
gi|341628150|gb|EGS53427.1| oligoribonuclease [Vibrio cholerae HC-40A1]
gi|341641479|gb|EGS66020.1| oligoribonuclease [Vibrio cholerae HFU-02]
gi|341648859|gb|EGS72882.1| oligoribonuclease [Vibrio cholerae HC-38A1]
gi|356422049|gb|EHH75534.1| oligoribonuclease [Vibrio cholerae HC-06A1]
gi|356422858|gb|EHH76326.1| oligoribonuclease [Vibrio cholerae HC-21A1]
gi|356427042|gb|EHH80311.1| oligoribonuclease [Vibrio cholerae HC-19A1]
gi|356433382|gb|EHH86572.1| oligoribonuclease [Vibrio cholerae HC-23A1]
gi|356435229|gb|EHH88386.1| oligoribonuclease [Vibrio cholerae HC-22A1]
gi|356438334|gb|EHH91374.1| oligoribonuclease [Vibrio cholerae HC-28A1]
gi|356443964|gb|EHH96781.1| oligoribonuclease [Vibrio cholerae HC-32A1]
gi|356448216|gb|EHI00996.1| oligoribonuclease [Vibrio cholerae HC-43A1]
gi|356450904|gb|EHI03611.1| oligoribonuclease [Vibrio cholerae HC-33A2]
gi|356456615|gb|EHI09208.1| oligoribonuclease [Vibrio cholerae HC-48B2]
gi|356648132|gb|AET28187.1| oligoribonuclease [Vibrio cholerae O1 str. 2010EL-1786]
gi|378793731|gb|AFC57202.1| oligoribonuclease [Vibrio cholerae IEC224]
gi|395922897|gb|EJH33711.1| oligoribonuclease [Vibrio cholerae CP1032(5)]
gi|395933091|gb|EJH43833.1| oligoribonuclease [Vibrio cholerae CP1042(15)]
gi|395934960|gb|EJH45696.1| oligoribonuclease [Vibrio cholerae CP1046(19)]
gi|395937923|gb|EJH48629.1| oligoribonuclease [Vibrio cholerae CP1048(21)]
gi|395946877|gb|EJH57536.1| oligoribonuclease [Vibrio cholerae HC-20A2]
gi|395948680|gb|EJH59322.1| oligoribonuclease [Vibrio cholerae HC-46A1]
gi|395964327|gb|EJH74557.1| oligoribonuclease [Vibrio cholerae HC-56A2]
gi|395964531|gb|EJH74746.1| oligoribonuclease [Vibrio cholerae HC-57A2]
gi|395967494|gb|EJH77578.1| oligoribonuclease [Vibrio cholerae HC-42A1]
gi|395975944|gb|EJH85412.1| oligoribonuclease [Vibrio cholerae HC-47A1]
gi|395978705|gb|EJH88079.1| oligoribonuclease [Vibrio cholerae CP1030(3)]
gi|395979751|gb|EJH89083.1| oligoribonuclease [Vibrio cholerae CP1047(20)]
gi|408010623|gb|EKG48475.1| oligoribonuclease [Vibrio cholerae HC-39A1]
gi|408037054|gb|EKG73461.1| oligoribonuclease [Vibrio cholerae CP1037(10)]
gi|408037774|gb|EKG74149.1| oligoribonuclease [Vibrio cholerae CP1040(13)]
gi|408045250|gb|EKG81100.1| oligoribonuclease [Vibrio Cholerae CP1044(17)]
gi|408047139|gb|EKG82790.1| oligoribonuclease [Vibrio cholerae CP1050(23)]
gi|408057890|gb|EKG92720.1| oligoribonuclease [Vibrio cholerae HC-81A2]
gi|408612073|gb|EKK85420.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|408628006|gb|EKL00787.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|408643563|gb|EKL15284.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|408659510|gb|EKL30554.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|408660328|gb|EKL31347.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|408849780|gb|EKL89787.1| oligoribonuclease [Vibrio cholerae HC-37A1]
gi|408850096|gb|EKL90081.1| oligoribonuclease [Vibrio cholerae HC-17A2]
gi|408875013|gb|EKM14169.1| oligoribonuclease [Vibrio cholerae HC-62B1]
gi|408881670|gb|EKM20534.1| oligoribonuclease [Vibrio cholerae HC-69A1]
gi|439972049|gb|ELP48354.1| oligoribonuclease [Vibrio cholerae 4260B]
gi|443433266|gb|ELS75778.1| oligoribonuclease [Vibrio cholerae HC-64A1]
gi|443437096|gb|ELS83201.1| oligoribonuclease [Vibrio cholerae HC-65A1]
gi|443440929|gb|ELS90605.1| oligoribonuclease [Vibrio cholerae HC-67A1]
gi|443444750|gb|ELS98013.1| oligoribonuclease [Vibrio cholerae HC-68A1]
gi|443448587|gb|ELT05211.1| oligoribonuclease [Vibrio cholerae HC-71A1]
gi|443451645|gb|ELT11895.1| oligoribonuclease [Vibrio cholerae HC-72A2]
gi|443459931|gb|ELT27323.1| oligoribonuclease [Vibrio cholerae HC-7A1]
gi|443462814|gb|ELT33838.1| oligoribonuclease [Vibrio cholerae HC-80A1]
gi|443467705|gb|ELT42360.1| oligoribonuclease [Vibrio cholerae HC-81A1]
gi|448266061|gb|EMB03292.1| 3'-to-5' oligoribonuclease (Orn) [Vibrio cholerae O1 str. Inaba
G4222]
Length = 181
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E+ +I+E+A I+TD +L EGP + IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 ASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ +FK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180
>gi|386740942|ref|YP_006214122.1| oligoribonuclease [Corynebacterium pseudotuberculosis 31]
gi|387141193|ref|YP_005697171.1| oligoribonuclease [Corynebacterium pseudotuberculosis 1/06-A]
gi|389850966|ref|YP_006353201.1| oligoribonuclease [Corynebacterium pseudotuberculosis 258]
gi|355392984|gb|AER69649.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 1/06-A]
gi|384477636|gb|AFH91432.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 31]
gi|388248272|gb|AFK17263.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 258]
Length = 209
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 105/178 (58%), Gaps = 1/178 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL I+E+A +ITD L EG DLV+H T L M ++ HE
Sbjct: 11 LVWIDLEMTGLDTHRHVIVEVAALITDADLNILGEGVDLVVHATDAQLAEMDDYVTAMHE 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGLT+++ S ++ EAE V+E + K+ P LAGNS+ D F+ YMP L +
Sbjct: 71 NSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAGNSIATDRSFINAYMPRLDNA 130
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +VDVSS+K L RW PR Y P K HRAL DI ESI EL YY+ +FK +L
Sbjct: 131 LHYRMVDVSSVKELARRWAPRVYFNQPQKGMAHRALADIIESIRELAYYRRALFKEDL 188
>gi|227886794|ref|ZP_04004599.1| exoribonuclease II [Escherichia coli 83972]
gi|300816535|ref|ZP_07096756.1| exonuclease [Escherichia coli MS 107-1]
gi|300821256|ref|ZP_07101404.1| exonuclease [Escherichia coli MS 119-7]
gi|300899700|ref|ZP_07117927.1| exonuclease [Escherichia coli MS 198-1]
gi|300905993|ref|ZP_07123717.1| exonuclease [Escherichia coli MS 84-1]
gi|300922430|ref|ZP_07138550.1| exonuclease [Escherichia coli MS 182-1]
gi|300929272|ref|ZP_07144748.1| exonuclease [Escherichia coli MS 187-1]
gi|300974947|ref|ZP_07172786.1| exonuclease [Escherichia coli MS 45-1]
gi|300975250|ref|ZP_07172914.1| exonuclease [Escherichia coli MS 200-1]
gi|301047612|ref|ZP_07194678.1| exonuclease [Escherichia coli MS 185-1]
gi|301302580|ref|ZP_07208710.1| exonuclease [Escherichia coli MS 124-1]
gi|301325927|ref|ZP_07219348.1| exonuclease [Escherichia coli MS 78-1]
gi|301646609|ref|ZP_07246475.1| exonuclease [Escherichia coli MS 146-1]
gi|309796975|ref|ZP_07691375.1| exonuclease [Escherichia coli MS 145-7]
gi|387832104|ref|YP_003352041.1| oligoribonuclease [Escherichia coli SE15]
gi|415863545|ref|ZP_11536785.1| exonuclease [Escherichia coli MS 85-1]
gi|415875283|ref|ZP_11542075.1| oligoribonuclease [Escherichia coli MS 79-10]
gi|422352618|ref|ZP_16433391.1| exonuclease [Escherichia coli MS 117-3]
gi|422357706|ref|ZP_16438371.1| exonuclease [Escherichia coli MS 110-3]
gi|422363192|ref|ZP_16443733.1| exonuclease [Escherichia coli MS 153-1]
gi|422370643|ref|ZP_16451036.1| exonuclease [Escherichia coli MS 16-3]
gi|422380174|ref|ZP_16460354.1| exonuclease [Escherichia coli MS 57-2]
gi|227836136|gb|EEJ46602.1| exoribonuclease II [Escherichia coli 83972]
gi|281181261|dbj|BAI57591.1| oligoribonuclease [Escherichia coli SE15]
gi|300300491|gb|EFJ56876.1| exonuclease [Escherichia coli MS 185-1]
gi|300308749|gb|EFJ63269.1| exonuclease [Escherichia coli MS 200-1]
gi|300356743|gb|EFJ72613.1| exonuclease [Escherichia coli MS 198-1]
gi|300402160|gb|EFJ85698.1| exonuclease [Escherichia coli MS 84-1]
gi|300410435|gb|EFJ93973.1| exonuclease [Escherichia coli MS 45-1]
gi|300421249|gb|EFK04560.1| exonuclease [Escherichia coli MS 182-1]
gi|300462765|gb|EFK26258.1| exonuclease [Escherichia coli MS 187-1]
gi|300526145|gb|EFK47214.1| exonuclease [Escherichia coli MS 119-7]
gi|300530765|gb|EFK51827.1| exonuclease [Escherichia coli MS 107-1]
gi|300842105|gb|EFK69865.1| exonuclease [Escherichia coli MS 124-1]
gi|300847280|gb|EFK75040.1| exonuclease [Escherichia coli MS 78-1]
gi|301075156|gb|EFK89962.1| exonuclease [Escherichia coli MS 146-1]
gi|308119388|gb|EFO56650.1| exonuclease [Escherichia coli MS 145-7]
gi|315255507|gb|EFU35475.1| exonuclease [Escherichia coli MS 85-1]
gi|315288511|gb|EFU47909.1| exonuclease [Escherichia coli MS 110-3]
gi|315294059|gb|EFU53411.1| exonuclease [Escherichia coli MS 153-1]
gi|315297605|gb|EFU56882.1| exonuclease [Escherichia coli MS 16-3]
gi|324008605|gb|EGB77824.1| exonuclease [Escherichia coli MS 57-2]
gi|324019342|gb|EGB88561.1| exonuclease [Escherichia coli MS 117-3]
gi|342929479|gb|EGU98201.1| oligoribonuclease [Escherichia coli MS 79-10]
Length = 199
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 26 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 86 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|423118278|ref|ZP_17105962.1| oligoribonuclease [Klebsiella oxytoca 10-5246]
gi|376402211|gb|EHT14810.1| oligoribonuclease [Klebsiella oxytoca 10-5246]
Length = 181
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDAHLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASTLGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|406913049|gb|EKD52535.1| hypothetical protein ACD_61C00311G0003 [uncultured bacterium]
Length = 181
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 111/177 (62%), Gaps = 6/177 (3%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVW+DLE T L ++ +I+EIA +ITD KL GPDLVIHQ + L M W Q H
Sbjct: 9 PLVWLDLEFTDLDVKRAQIVEIATVITDAKLNIKAIGPDLVIHQPESVLKGMVRWNQEHF 68
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++++ S +T + A ++ ++FVK + T +LAG SVY+D FL +YMP L
Sbjct: 69 SESGLMEEIITSKVTLKRAYEETLKFVKAHCAFKTGVLAGASVYIDREFLGEYMPLLYDY 128
Query: 190 FSHVLVDVSSIKALCMRWYPR--DYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
++D ++IK + RWYPR DY K+ + HRA DI ESI ELKYY+ N+FK
Sbjct: 129 LHFRIIDTNTIKEIMHRWYPRIPDYPKL----EAHRAGKDIVESINELKYYQANLFK 181
>gi|110346113|gb|ABG72350.1| oligoribonuclease [Escherichia coli 536]
Length = 229
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 56 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 115
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 116 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 175
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 176 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 228
>gi|432683019|ref|ZP_19918365.1| oligoribonuclease [Escherichia coli KTE143]
gi|431216043|gb|ELF13688.1| oligoribonuclease [Escherichia coli KTE143]
Length = 181
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPEGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPAILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|301023446|ref|ZP_07187227.1| exonuclease [Escherichia coli MS 69-1]
gi|300396998|gb|EFJ80536.1| exonuclease [Escherichia coli MS 69-1]
Length = 199
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 26 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 86 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPAILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|427390374|ref|ZP_18884780.1| hypothetical protein HMPREF9233_00283 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732689|gb|EKU95496.1| hypothetical protein HMPREF9233_00283 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 211
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
P+VWID EMTGL +E D I+EI+ ++TD +L EG D+VI ++E LDSM E+ +N H
Sbjct: 4 PIVWIDCEMTGLDLEHDDIVEISVVVTDSELNPVDEGIDIVIKPSQEGLDSMNEFVRNMH 63
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL + +G++ EAE+QV+ ++ V L GNSV D FL+K MP L
Sbjct: 64 TNSGLINE-WDNGVSIEEAEEQVLAYLAPRVEKGKAPLGGNSVGTDKTFLQKQMPRLVDY 122
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
+ +VDVSSIK L RWYPR Y P K HRAL DI +SI EL+YY+
Sbjct: 123 LHYRIVDVSSIKELAKRWYPRVYFASPEKFGNHRALGDIYDSIDELRYYR 172
>gi|229512381|ref|ZP_04401856.1| oligoribonuclease [Vibrio cholerae TMA 21]
gi|229526905|ref|ZP_04416308.1| oligoribonuclease [Vibrio cholerae bv. albensis VL426]
gi|229526997|ref|ZP_04416393.1| oligoribonuclease [Vibrio cholerae 12129(1)]
gi|262172561|ref|ZP_06040239.1| oligoribonuclease [Vibrio mimicus MB-451]
gi|417823471|ref|ZP_12470066.1| oligoribonuclease [Vibrio cholerae HE48]
gi|422921590|ref|ZP_16954806.1| oligoribonuclease [Vibrio cholerae BJG-01]
gi|429885619|ref|ZP_19367199.1| 3'-to-5' oligoribonuclease (orn) [Vibrio cholerae PS15]
gi|229335520|gb|EEO01001.1| oligoribonuclease [Vibrio cholerae 12129(1)]
gi|229336074|gb|EEO01093.1| oligoribonuclease [Vibrio cholerae bv. albensis VL426]
gi|229350596|gb|EEO15541.1| oligoribonuclease [Vibrio cholerae TMA 21]
gi|261893637|gb|EEY39623.1| oligoribonuclease [Vibrio mimicus MB-451]
gi|340048510|gb|EGR09429.1| oligoribonuclease [Vibrio cholerae HE48]
gi|341648547|gb|EGS72602.1| oligoribonuclease [Vibrio cholerae BJG-01]
gi|429227513|gb|EKY33523.1| 3'-to-5' oligoribonuclease (orn) [Vibrio cholerae PS15]
Length = 181
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 ASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ +FK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180
>gi|390568725|ref|ZP_10249020.1| oligoribonuclease [Burkholderia terrae BS001]
gi|420256224|ref|ZP_14759079.1| oligoribonuclease (3'->5' exoribonuclease) [Burkholderia sp. BT03]
gi|389939329|gb|EIN01163.1| oligoribonuclease [Burkholderia terrae BS001]
gi|398043638|gb|EJL36527.1| oligoribonuclease (3'->5' exoribonuclease) [Burkholderia sp. BT03]
Length = 208
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
M LVW+D+EMTGL + DRI+EIA ++T+ L + VEGP L IHQ+ E L M +W +N
Sbjct: 17 MNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDRLVEGPVLAIHQSDEALGKMDDWNKNT 76
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
H SGL +V S +TE +A +Q+ F+ ++V + GNS+ D F+ ++MP+L +
Sbjct: 77 HGRSGLIDRVRASTVTEADATEQIRAFLGQHVPPGKSPMCGNSICQDRRFMARWMPELET 136
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K LC RW P Y+ K H AL DI ESI EL+YY+E+
Sbjct: 137 FFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELRYYREHFL 190
>gi|429090494|ref|ZP_19153212.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter dublinensis 1210]
gi|426745038|emb|CCJ79325.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter dublinensis 1210]
Length = 181
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD +L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPRQDRIIEIATLVTDAELNILAEGPVIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S + E EAE+ +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVDRVKASTMDEHEAERATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEVLDGL-KKQNTHQALDDIRESVAELAYYREHFIK 180
>gi|440289411|ref|YP_007342176.1| oligoribonuclease (3'->5' exoribonuclease) [Enterobacteriaceae
bacterium strain FGI 57]
gi|440048933|gb|AGB79991.1| oligoribonuclease (3'->5' exoribonuclease) [Enterobacteriaceae
bacterium strain FGI 57]
Length = 181
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVERVKASRIDDRAAELATLEFLKQWVPEGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|157147866|ref|YP_001455185.1| oligoribonuclease [Citrobacter koseri ATCC BAA-895]
gi|166230513|sp|A8AMN6.1|ORN_CITK8 RecName: Full=Oligoribonuclease
gi|157085071|gb|ABV14749.1| hypothetical protein CKO_03672 [Citrobacter koseri ATCC BAA-895]
Length = 181
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSAEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +R AE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASSFDDRAAELATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|423126974|ref|ZP_17114653.1| oligoribonuclease [Klebsiella oxytoca 10-5250]
gi|376396041|gb|EHT08685.1| oligoribonuclease [Klebsiella oxytoca 10-5250]
Length = 181
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +REAE +EF+KK V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASTQGDREAELATIEFLKKWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|311281283|ref|YP_003943514.1| Exonuclease RNase T and DNA polymerase III [Enterobacter cloacae
SCF1]
gi|308750478|gb|ADO50230.1| Exonuclease RNase T and DNA polymerase III [Enterobacter cloacae
SCF1]
Length = 181
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASAIDDRAAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|365968665|ref|YP_004950226.1| oligoribonuclease [Enterobacter cloacae EcWSU1]
gi|365747578|gb|AEW71805.1| Oligoribonuclease [Enterobacter cloacae EcWSU1]
Length = 185
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ + L M EW H
Sbjct: 12 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDEWNVRTHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAE + F+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 72 GSGLVERVKASTMGDREAELATLAFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELESYF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 132 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 184
>gi|153217654|ref|ZP_01951335.1| oligoribonuclease [Vibrio cholerae 1587]
gi|229519881|ref|ZP_04409314.1| oligoribonuclease [Vibrio cholerae TM 11079-80]
gi|297582247|ref|ZP_06944163.1| oligoribonuclease [Vibrio cholerae RC385]
gi|419828916|ref|ZP_14352406.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|419831698|ref|ZP_14355166.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|419835287|ref|ZP_14358734.1| oligoribonuclease [Vibrio cholerae HC-46B1]
gi|421341898|ref|ZP_15792306.1| oligoribonuclease [Vibrio cholerae HC-43B1]
gi|421350200|ref|ZP_15800567.1| oligoribonuclease [Vibrio cholerae HE-25]
gi|421353172|ref|ZP_15803507.1| oligoribonuclease [Vibrio cholerae HE-45]
gi|422305761|ref|ZP_16392951.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|423733648|ref|ZP_17706867.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|423814285|ref|ZP_17715027.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|423847511|ref|ZP_17718827.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|423996496|ref|ZP_17739767.1| oligoribonuclease [Vibrio cholerae HC-02C1]
gi|424007957|ref|ZP_17750909.1| oligoribonuclease [Vibrio cholerae HC-44C1]
gi|424015196|ref|ZP_17755048.1| oligoribonuclease [Vibrio cholerae HC-55B2]
gi|424018309|ref|ZP_17758116.1| oligoribonuclease [Vibrio cholerae HC-59B1]
gi|424623700|ref|ZP_18062182.1| oligoribonuclease [Vibrio cholerae HC-50A1]
gi|424628259|ref|ZP_18066572.1| oligoribonuclease [Vibrio cholerae HC-51A1]
gi|424632213|ref|ZP_18070335.1| oligoribonuclease [Vibrio cholerae HC-52A1]
gi|424635300|ref|ZP_18073326.1| oligoribonuclease [Vibrio cholerae HC-55A1]
gi|424639092|ref|ZP_18076994.1| oligoribonuclease [Vibrio cholerae HC-56A1]
gi|424647375|ref|ZP_18085057.1| oligoribonuclease [Vibrio cholerae HC-57A1]
gi|443526229|ref|ZP_21092320.1| oligoribonuclease [Vibrio cholerae HC-78A1]
gi|124113399|gb|EAY32219.1| oligoribonuclease [Vibrio cholerae 1587]
gi|229343122|gb|EEO08107.1| oligoribonuclease [Vibrio cholerae TM 11079-80]
gi|297533548|gb|EFH72393.1| oligoribonuclease [Vibrio cholerae RC385]
gi|395946621|gb|EJH57282.1| oligoribonuclease [Vibrio cholerae HC-43B1]
gi|395954922|gb|EJH65528.1| oligoribonuclease [Vibrio cholerae HE-25]
gi|395955294|gb|EJH65896.1| oligoribonuclease [Vibrio cholerae HE-45]
gi|408016571|gb|EKG54114.1| oligoribonuclease [Vibrio cholerae HC-50A1]
gi|408021969|gb|EKG59199.1| oligoribonuclease [Vibrio cholerae HC-52A1]
gi|408027943|gb|EKG64880.1| oligoribonuclease [Vibrio cholerae HC-56A1]
gi|408027995|gb|EKG64925.1| oligoribonuclease [Vibrio cholerae HC-55A1]
gi|408037703|gb|EKG74085.1| oligoribonuclease [Vibrio cholerae HC-57A1]
gi|408059513|gb|EKG94271.1| oligoribonuclease [Vibrio cholerae HC-51A1]
gi|408622513|gb|EKK95496.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|408628137|gb|EKL00906.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|408632019|gb|EKL04525.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|408637016|gb|EKL09120.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|408645520|gb|EKL17167.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|408652347|gb|EKL23567.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|408855090|gb|EKL94823.1| oligoribonuclease [Vibrio cholerae HC-02C1]
gi|408859190|gb|EKL98854.1| oligoribonuclease [Vibrio cholerae HC-46B1]
gi|408862282|gb|EKM01812.1| oligoribonuclease [Vibrio cholerae HC-55B2]
gi|408866615|gb|EKM05993.1| oligoribonuclease [Vibrio cholerae HC-44C1]
gi|408871074|gb|EKM10334.1| oligoribonuclease [Vibrio cholerae HC-59B1]
gi|443455438|gb|ELT19214.1| oligoribonuclease [Vibrio cholerae HC-78A1]
Length = 181
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 ASGLVARVRQSKVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ +FK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180
>gi|335044621|ref|ZP_08537646.1| oligoribonuclease [Methylophaga aminisulfidivorans MP]
gi|333787867|gb|EGL53751.1| oligoribonuclease [Methylophaga aminisulfidivorans MP]
Length = 185
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL D I+EIA I+TD +L EGP L IHQ L+ M EW H
Sbjct: 8 LIWIDLEMTGLDTNNDYIIEIATIVTDAQLNVLAEGPILAIHQDDAILNGMDEWNTRQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V +S L E EAE+Q +EF+KK V + GNS+ D FL + MP+L + F
Sbjct: 68 KSGLVERVRNSSLNEAEAEQQTIEFLKKYVPAGVSPMCGNSICQDRRFLARCMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSS+K L RW P+ K K H A+DDI++SI EL++Y+E K
Sbjct: 128 HYRNLDVSSLKELARRWAPK-VEKSFKKRSSHLAMDDIKDSIRELEHYREYFIK 180
>gi|417819228|ref|ZP_12465846.1| oligoribonuclease [Vibrio cholerae HE39]
gi|423945777|ref|ZP_17733290.1| exonuclease family protein [Vibrio cholerae HE-40]
gi|423974961|ref|ZP_17736838.1| exonuclease family protein [Vibrio cholerae HE-46]
gi|340042758|gb|EGR03722.1| oligoribonuclease [Vibrio cholerae HE39]
gi|408662249|gb|EKL33211.1| exonuclease family protein [Vibrio cholerae HE-40]
gi|408666337|gb|EKL37130.1| exonuclease family protein [Vibrio cholerae HE-46]
Length = 181
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 ASGLVTRVRQSKVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ +FK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180
>gi|258624475|ref|ZP_05719421.1| oligoribonuclease [Vibrio mimicus VM603]
gi|258583224|gb|EEW08027.1| oligoribonuclease [Vibrio mimicus VM603]
Length = 181
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL ++MP L + F
Sbjct: 68 ASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYRHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ +FK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKTVFK 180
>gi|38704238|ref|NP_313168.2| oligoribonuclease [Escherichia coli O157:H7 str. Sakai]
gi|161367457|ref|NP_290795.2| oligoribonuclease [Escherichia coli O157:H7 str. EDL933]
gi|168747976|ref|ZP_02772998.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4113]
gi|168755351|ref|ZP_02780358.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4401]
gi|168766441|ref|ZP_02791448.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4486]
gi|168774540|ref|ZP_02799547.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4196]
gi|168780594|ref|ZP_02805601.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4076]
gi|168784799|ref|ZP_02809806.1| oligoribonuclease [Escherichia coli O157:H7 str. EC869]
gi|168802329|ref|ZP_02827336.1| oligoribonuclease [Escherichia coli O157:H7 str. EC508]
gi|195935954|ref|ZP_03081336.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4024]
gi|208812669|ref|ZP_03253998.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4045]
gi|208819030|ref|ZP_03259350.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4042]
gi|209398620|ref|YP_002273707.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4115]
gi|217325417|ref|ZP_03441501.1| oligoribonuclease [Escherichia coli O157:H7 str. TW14588]
gi|254796184|ref|YP_003081021.1| oligoribonuclease [Escherichia coli O157:H7 str. TW14359]
gi|261225285|ref|ZP_05939566.1| oligoribonuclease [Escherichia coli O157:H7 str. FRIK2000]
gi|261255463|ref|ZP_05947996.1| oligoribonuclease [Escherichia coli O157:H7 str. FRIK966]
gi|291285577|ref|YP_003502395.1| Oligoribonuclease [Escherichia coli O55:H7 str. CB9615]
gi|387509622|ref|YP_006161878.1| oligoribonuclease [Escherichia coli O55:H7 str. RM12579]
gi|387885385|ref|YP_006315687.1| oligoribonuclease [Escherichia coli Xuzhou21]
gi|416308957|ref|ZP_11655410.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O157:H7 str.
1044]
gi|416319347|ref|ZP_11661899.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O157:H7 str.
EC1212]
gi|416328304|ref|ZP_11668064.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O157:H7 str.
1125]
gi|416779451|ref|ZP_11876456.1| oligoribonuclease [Escherichia coli O157:H7 str. G5101]
gi|416790649|ref|ZP_11881346.1| oligoribonuclease [Escherichia coli O157:H- str. 493-89]
gi|416802449|ref|ZP_11886234.1| oligoribonuclease [Escherichia coli O157:H- str. H 2687]
gi|416813273|ref|ZP_11891172.1| oligoribonuclease [Escherichia coli O55:H7 str. 3256-97]
gi|416823833|ref|ZP_11895775.1| oligoribonuclease [Escherichia coli O55:H7 str. USDA 5905]
gi|416834080|ref|ZP_11900769.1| oligoribonuclease [Escherichia coli O157:H7 str. LSU-61]
gi|419054041|ref|ZP_13600904.1| oligoribonuclease monomer [Escherichia coli DEC3B]
gi|419060110|ref|ZP_13606904.1| oligoribonuclease monomer [Escherichia coli DEC3C]
gi|419065471|ref|ZP_13612174.1| oligoribonuclease monomer [Escherichia coli DEC3D]
gi|419072468|ref|ZP_13618061.1| oligoribonuclease monomer [Escherichia coli DEC3E]
gi|419078370|ref|ZP_13623860.1| oligoribonuclease monomer [Escherichia coli DEC3F]
gi|419083510|ref|ZP_13628948.1| oligoribonuclease monomer [Escherichia coli DEC4A]
gi|419089516|ref|ZP_13634860.1| oligoribonuclease monomer [Escherichia coli DEC4B]
gi|419095809|ref|ZP_13641078.1| oligoribonuclease monomer [Escherichia coli DEC4C]
gi|419101304|ref|ZP_13646485.1| oligoribonuclease monomer [Escherichia coli DEC4D]
gi|419106795|ref|ZP_13651910.1| oligoribonuclease monomer [Escherichia coli DEC4E]
gi|419112245|ref|ZP_13657290.1| oligoribonuclease monomer [Escherichia coli DEC4F]
gi|419117761|ref|ZP_13662763.1| oligoribonuclease monomer [Escherichia coli DEC5A]
gi|419123541|ref|ZP_13668476.1| oligoribonuclease monomer [Escherichia coli DEC5B]
gi|419129026|ref|ZP_13673889.1| oligoribonuclease monomer [Escherichia coli DEC5C]
gi|419129317|ref|ZP_13674176.1| oligoribonuclease monomer [Escherichia coli DEC5D]
gi|420272649|ref|ZP_14774991.1| oligoribonuclease [Escherichia coli PA22]
gi|420278348|ref|ZP_14780621.1| oligoribonuclease [Escherichia coli PA40]
gi|420283453|ref|ZP_14785678.1| oligoribonuclease [Escherichia coli TW06591]
gi|420284612|ref|ZP_14786832.1| oligoribonuclease [Escherichia coli TW10246]
gi|420295370|ref|ZP_14797474.1| oligoribonuclease [Escherichia coli TW11039]
gi|420301284|ref|ZP_14803322.1| oligoribonuclease [Escherichia coli TW09109]
gi|420301908|ref|ZP_14803943.1| oligoribonuclease [Escherichia coli TW10119]
gi|420312418|ref|ZP_14814339.1| oligoribonuclease [Escherichia coli EC1738]
gi|420318354|ref|ZP_14820216.1| oligoribonuclease [Escherichia coli EC1734]
gi|421815287|ref|ZP_16250978.1| oligoribonuclease [Escherichia coli 8.0416]
gi|421821031|ref|ZP_16256508.1| oligoribonuclease [Escherichia coli 10.0821]
gi|421827091|ref|ZP_16262437.1| oligoribonuclease [Escherichia coli FRIK920]
gi|421828125|ref|ZP_16263457.1| oligoribonuclease [Escherichia coli PA7]
gi|423728479|ref|ZP_17702215.1| oligoribonuclease [Escherichia coli PA31]
gi|424080532|ref|ZP_17817462.1| oligoribonuclease [Escherichia coli FDA505]
gi|424086942|ref|ZP_17823402.1| oligoribonuclease [Escherichia coli FDA517]
gi|424093356|ref|ZP_17829255.1| oligoribonuclease [Escherichia coli FRIK1996]
gi|424100058|ref|ZP_17835278.1| oligoribonuclease [Escherichia coli FRIK1985]
gi|424106250|ref|ZP_17840948.1| oligoribonuclease [Escherichia coli FRIK1990]
gi|424112862|ref|ZP_17847066.1| oligoribonuclease [Escherichia coli 93-001]
gi|424118809|ref|ZP_17852618.1| oligoribonuclease [Escherichia coli PA3]
gi|424124994|ref|ZP_17858266.1| oligoribonuclease [Escherichia coli PA5]
gi|424131175|ref|ZP_17864053.1| oligoribonuclease [Escherichia coli PA9]
gi|424137494|ref|ZP_17869901.1| oligoribonuclease [Escherichia coli PA10]
gi|424144031|ref|ZP_17875856.1| oligoribonuclease [Escherichia coli PA14]
gi|424150396|ref|ZP_17881749.1| oligoribonuclease [Escherichia coli PA15]
gi|424169082|ref|ZP_17887187.1| oligoribonuclease [Escherichia coli PA24]
gi|424259463|ref|ZP_17892725.1| oligoribonuclease [Escherichia coli PA25]
gi|424336480|ref|ZP_17898661.1| oligoribonuclease [Escherichia coli PA28]
gi|424452743|ref|ZP_17904353.1| oligoribonuclease [Escherichia coli PA32]
gi|424458902|ref|ZP_17909970.1| oligoribonuclease [Escherichia coli PA33]
gi|424465463|ref|ZP_17915738.1| oligoribonuclease [Escherichia coli PA39]
gi|424471680|ref|ZP_17921450.1| oligoribonuclease [Escherichia coli PA41]
gi|424478148|ref|ZP_17927441.1| oligoribonuclease [Escherichia coli PA42]
gi|424483950|ref|ZP_17932905.1| oligoribonuclease [Escherichia coli TW07945]
gi|424490149|ref|ZP_17938656.1| oligoribonuclease [Escherichia coli TW09098]
gi|424496876|ref|ZP_17944342.1| oligoribonuclease [Escherichia coli TW09195]
gi|424503465|ref|ZP_17950324.1| oligoribonuclease [Escherichia coli EC4203]
gi|424509740|ref|ZP_17956077.1| oligoribonuclease [Escherichia coli EC4196]
gi|424517162|ref|ZP_17961705.1| oligoribonuclease [Escherichia coli TW14313]
gi|424523276|ref|ZP_17967351.1| oligoribonuclease [Escherichia coli TW14301]
gi|424529121|ref|ZP_17972811.1| oligoribonuclease [Escherichia coli EC4421]
gi|424535262|ref|ZP_17978589.1| oligoribonuclease [Escherichia coli EC4422]
gi|424541367|ref|ZP_17984287.1| oligoribonuclease [Escherichia coli EC4013]
gi|424547522|ref|ZP_17989820.1| oligoribonuclease [Escherichia coli EC4402]
gi|424553722|ref|ZP_17995520.1| oligoribonuclease [Escherichia coli EC4439]
gi|424559915|ref|ZP_18001283.1| oligoribonuclease [Escherichia coli EC4436]
gi|424566239|ref|ZP_18007217.1| oligoribonuclease [Escherichia coli EC4437]
gi|424572371|ref|ZP_18012877.1| oligoribonuclease [Escherichia coli EC4448]
gi|424578527|ref|ZP_18018533.1| oligoribonuclease [Escherichia coli EC1845]
gi|424584346|ref|ZP_18023968.1| oligoribonuclease [Escherichia coli EC1863]
gi|425101001|ref|ZP_18503715.1| oligoribonuclease [Escherichia coli 3.4870]
gi|425107097|ref|ZP_18509386.1| oligoribonuclease [Escherichia coli 5.2239]
gi|425113079|ref|ZP_18514978.1| oligoribonuclease [Escherichia coli 6.0172]
gi|425129053|ref|ZP_18530199.1| oligoribonuclease [Escherichia coli 8.0586]
gi|425134791|ref|ZP_18535618.1| oligoribonuclease [Escherichia coli 8.2524]
gi|425141385|ref|ZP_18541742.1| oligoribonuclease [Escherichia coli 10.0833]
gi|425147064|ref|ZP_18547033.1| oligoribonuclease [Escherichia coli 10.0869]
gi|425153176|ref|ZP_18552766.1| oligoribonuclease [Escherichia coli 88.0221]
gi|425159077|ref|ZP_18558316.1| oligoribonuclease [Escherichia coli PA34]
gi|425159536|ref|ZP_18558746.1| oligoribonuclease [Escherichia coli FDA506]
gi|425171134|ref|ZP_18569586.1| oligoribonuclease [Escherichia coli FDA507]
gi|425177170|ref|ZP_18575267.1| oligoribonuclease [Escherichia coli FDA504]
gi|425183249|ref|ZP_18580921.1| oligoribonuclease [Escherichia coli FRIK1999]
gi|425189533|ref|ZP_18586782.1| oligoribonuclease [Escherichia coli FRIK1997]
gi|425196279|ref|ZP_18593024.1| oligoribonuclease [Escherichia coli NE1487]
gi|425202759|ref|ZP_18598942.1| oligoribonuclease [Escherichia coli NE037]
gi|425203124|ref|ZP_18599286.1| oligoribonuclease [Escherichia coli FRIK2001]
gi|425214914|ref|ZP_18610295.1| oligoribonuclease [Escherichia coli PA4]
gi|425220999|ref|ZP_18615940.1| oligoribonuclease [Escherichia coli PA23]
gi|425227655|ref|ZP_18622098.1| oligoribonuclease [Escherichia coli PA49]
gi|425233799|ref|ZP_18627816.1| oligoribonuclease [Escherichia coli PA45]
gi|425239722|ref|ZP_18633420.1| oligoribonuclease [Escherichia coli TT12B]
gi|425245979|ref|ZP_18639262.1| oligoribonuclease [Escherichia coli MA6]
gi|425252115|ref|ZP_18645037.1| oligoribonuclease [Escherichia coli 5905]
gi|425257970|ref|ZP_18650441.1| oligoribonuclease [Escherichia coli CB7326]
gi|425264222|ref|ZP_18656188.1| oligoribonuclease [Escherichia coli EC96038]
gi|425270235|ref|ZP_18661837.1| oligoribonuclease [Escherichia coli 5412]
gi|425297698|ref|ZP_18687789.1| oligoribonuclease [Escherichia coli PA38]
gi|425314383|ref|ZP_18703525.1| oligoribonuclease [Escherichia coli EC1735]
gi|425320362|ref|ZP_18709116.1| oligoribonuclease [Escherichia coli EC1736]
gi|425326515|ref|ZP_18714812.1| oligoribonuclease [Escherichia coli EC1737]
gi|425332819|ref|ZP_18720604.1| oligoribonuclease [Escherichia coli EC1846]
gi|425339000|ref|ZP_18726311.1| oligoribonuclease [Escherichia coli EC1847]
gi|425345290|ref|ZP_18732154.1| oligoribonuclease [Escherichia coli EC1848]
gi|425351126|ref|ZP_18737561.1| oligoribonuclease [Escherichia coli EC1849]
gi|425357398|ref|ZP_18743435.1| oligoribonuclease [Escherichia coli EC1850]
gi|425363353|ref|ZP_18748976.1| oligoribonuclease [Escherichia coli EC1856]
gi|425369616|ref|ZP_18754664.1| oligoribonuclease [Escherichia coli EC1862]
gi|425375921|ref|ZP_18760534.1| oligoribonuclease [Escherichia coli EC1864]
gi|425388807|ref|ZP_18772343.1| oligoribonuclease [Escherichia coli EC1866]
gi|425395534|ref|ZP_18778616.1| oligoribonuclease [Escherichia coli EC1868]
gi|425401590|ref|ZP_18784272.1| oligoribonuclease [Escherichia coli EC1869]
gi|425407685|ref|ZP_18789882.1| oligoribonuclease [Escherichia coli EC1870]
gi|425414025|ref|ZP_18795764.1| oligoribonuclease [Escherichia coli NE098]
gi|425420346|ref|ZP_18801595.1| oligoribonuclease [Escherichia coli FRIK523]
gi|425431643|ref|ZP_18812229.1| oligoribonuclease [Escherichia coli 0.1304]
gi|428950064|ref|ZP_19022310.1| oligoribonuclease [Escherichia coli 88.1467]
gi|428956118|ref|ZP_19027886.1| oligoribonuclease [Escherichia coli 88.1042]
gi|428962172|ref|ZP_19033427.1| oligoribonuclease [Escherichia coli 89.0511]
gi|428968765|ref|ZP_19039443.1| oligoribonuclease [Escherichia coli 90.0091]
gi|428974501|ref|ZP_19044787.1| oligoribonuclease [Escherichia coli 90.0039]
gi|428980933|ref|ZP_19050712.1| oligoribonuclease [Escherichia coli 90.2281]
gi|428986678|ref|ZP_19056043.1| oligoribonuclease [Escherichia coli 93.0055]
gi|428992831|ref|ZP_19061797.1| oligoribonuclease [Escherichia coli 93.0056]
gi|428998725|ref|ZP_19067294.1| oligoribonuclease [Escherichia coli 94.0618]
gi|429005195|ref|ZP_19073228.1| oligoribonuclease [Escherichia coli 95.0183]
gi|429011218|ref|ZP_19078576.1| oligoribonuclease [Escherichia coli 95.1288]
gi|429017625|ref|ZP_19084478.1| oligoribonuclease [Escherichia coli 95.0943]
gi|429023454|ref|ZP_19089945.1| oligoribonuclease [Escherichia coli 96.0428]
gi|429029543|ref|ZP_19095491.1| oligoribonuclease [Escherichia coli 96.0427]
gi|429035709|ref|ZP_19101204.1| oligoribonuclease [Escherichia coli 96.0939]
gi|429041819|ref|ZP_19106878.1| oligoribonuclease [Escherichia coli 96.0932]
gi|429047626|ref|ZP_19112315.1| oligoribonuclease [Escherichia coli 96.0107]
gi|429053013|ref|ZP_19117564.1| oligoribonuclease [Escherichia coli 97.0003]
gi|429058571|ref|ZP_19122785.1| oligoribonuclease [Escherichia coli 97.1742]
gi|429064089|ref|ZP_19128022.1| oligoribonuclease [Escherichia coli 97.0007]
gi|429070321|ref|ZP_19133729.1| oligoribonuclease [Escherichia coli 99.0672]
gi|429076082|ref|ZP_19139316.1| oligoribonuclease [Escherichia coli 99.0678]
gi|429081266|ref|ZP_19144386.1| oligoribonuclease [Escherichia coli 99.0713]
gi|429829458|ref|ZP_19360427.1| oligoribonuclease [Escherichia coli 96.0109]
gi|429835936|ref|ZP_19366144.1| oligoribonuclease [Escherichia coli 97.0010]
gi|432590787|ref|ZP_19827122.1| oligoribonuclease [Escherichia coli KTE60]
gi|444927958|ref|ZP_21247202.1| oligoribonuclease [Escherichia coli 09BKT078844]
gi|444933585|ref|ZP_21252572.1| oligoribonuclease [Escherichia coli 99.0814]
gi|444939030|ref|ZP_21257737.1| oligoribonuclease [Escherichia coli 99.0815]
gi|444940729|ref|ZP_21259354.1| oligoribonuclease [Escherichia coli 99.0816]
gi|444950121|ref|ZP_21268396.1| oligoribonuclease [Escherichia coli 99.0839]
gi|444955689|ref|ZP_21273734.1| oligoribonuclease [Escherichia coli 99.0848]
gi|444955983|ref|ZP_21274015.1| oligoribonuclease [Escherichia coli 99.1753]
gi|444966355|ref|ZP_21283893.1| oligoribonuclease [Escherichia coli 99.1775]
gi|444972436|ref|ZP_21289757.1| oligoribonuclease [Escherichia coli 99.1793]
gi|444977689|ref|ZP_21294735.1| oligoribonuclease [Escherichia coli 99.1805]
gi|444983072|ref|ZP_21299960.1| oligoribonuclease [Escherichia coli ATCC 700728]
gi|444988417|ref|ZP_21305178.1| oligoribonuclease [Escherichia coli PA11]
gi|444993813|ref|ZP_21310437.1| oligoribonuclease [Escherichia coli PA19]
gi|444998994|ref|ZP_21315478.1| oligoribonuclease [Escherichia coli PA13]
gi|445004550|ref|ZP_21320923.1| oligoribonuclease [Escherichia coli PA2]
gi|445008641|ref|ZP_21324879.1| oligoribonuclease [Escherichia coli PA47]
gi|445015070|ref|ZP_21331158.1| oligoribonuclease [Escherichia coli PA48]
gi|445020926|ref|ZP_21336873.1| oligoribonuclease [Escherichia coli PA8]
gi|445026368|ref|ZP_21342173.1| oligoribonuclease [Escherichia coli 7.1982]
gi|445031761|ref|ZP_21347409.1| oligoribonuclease [Escherichia coli 99.1781]
gi|445037221|ref|ZP_21352728.1| oligoribonuclease [Escherichia coli 99.1762]
gi|445041567|ref|ZP_21356937.1| oligoribonuclease [Escherichia coli PA35]
gi|445048054|ref|ZP_21363287.1| oligoribonuclease [Escherichia coli 3.4880]
gi|445053637|ref|ZP_21368631.1| oligoribonuclease [Escherichia coli 95.0083]
gi|445061619|ref|ZP_21374121.1| oligoribonuclease [Escherichia coli 99.0670]
gi|452968833|ref|ZP_21967060.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4009]
gi|20138827|sp|Q8XDP0.2|ORN_ECO57 RecName: Full=Oligoribonuclease
gi|187769887|gb|EDU33731.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4196]
gi|188017565|gb|EDU55687.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4113]
gi|189001658|gb|EDU70644.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4076]
gi|189357409|gb|EDU75828.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4401]
gi|189363946|gb|EDU82365.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4486]
gi|189374804|gb|EDU93220.1| oligoribonuclease [Escherichia coli O157:H7 str. EC869]
gi|189375661|gb|EDU94077.1| oligoribonuclease [Escherichia coli O157:H7 str. EC508]
gi|208733946|gb|EDZ82633.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4045]
gi|208739153|gb|EDZ86835.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4042]
gi|209160020|gb|ACI37453.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4115]
gi|217321638|gb|EEC30062.1| oligoribonuclease [Escherichia coli O157:H7 str. TW14588]
gi|254595584|gb|ACT74945.1| oligoribonuclease [Escherichia coli O157:H7 str. TW14359]
gi|290765450|gb|ADD59411.1| Oligoribonuclease [Escherichia coli O55:H7 str. CB9615]
gi|320190703|gb|EFW65353.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O157:H7 str.
EC1212]
gi|320638923|gb|EFX08569.1| oligoribonuclease [Escherichia coli O157:H7 str. G5101]
gi|320644292|gb|EFX13357.1| oligoribonuclease [Escherichia coli O157:H- str. 493-89]
gi|320649610|gb|EFX18134.1| oligoribonuclease [Escherichia coli O157:H- str. H 2687]
gi|320655006|gb|EFX22967.1| oligoribonuclease [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320660513|gb|EFX27974.1| oligoribonuclease [Escherichia coli O55:H7 str. USDA 5905]
gi|320665782|gb|EFX32819.1| oligoribonuclease [Escherichia coli O157:H7 str. LSU-61]
gi|326341785|gb|EGD65568.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O157:H7 str.
1125]
gi|326346640|gb|EGD70374.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O157:H7 str.
1044]
gi|374361616|gb|AEZ43323.1| oligoribonuclease [Escherichia coli O55:H7 str. RM12579]
gi|377888431|gb|EHU52902.1| oligoribonuclease monomer [Escherichia coli DEC3B]
gi|377901177|gb|EHU65500.1| oligoribonuclease monomer [Escherichia coli DEC3C]
gi|377904447|gb|EHU68727.1| oligoribonuclease monomer [Escherichia coli DEC3D]
gi|377905969|gb|EHU70228.1| oligoribonuclease monomer [Escherichia coli DEC3E]
gi|377916213|gb|EHU80303.1| oligoribonuclease monomer [Escherichia coli DEC3F]
gi|377922546|gb|EHU86532.1| oligoribonuclease monomer [Escherichia coli DEC4A]
gi|377925440|gb|EHU89380.1| oligoribonuclease monomer [Escherichia coli DEC4B]
gi|377935860|gb|EHU99654.1| oligoribonuclease monomer [Escherichia coli DEC4D]
gi|377936656|gb|EHV00450.1| oligoribonuclease monomer [Escherichia coli DEC4C]
gi|377942856|gb|EHV06584.1| oligoribonuclease monomer [Escherichia coli DEC4E]
gi|377952871|gb|EHV16452.1| oligoribonuclease monomer [Escherichia coli DEC4F]
gi|377956160|gb|EHV19711.1| oligoribonuclease monomer [Escherichia coli DEC5A]
gi|377960795|gb|EHV24274.1| oligoribonuclease monomer [Escherichia coli DEC5B]
gi|377968244|gb|EHV31638.1| oligoribonuclease monomer [Escherichia coli DEC5C]
gi|377983221|gb|EHV46465.1| oligoribonuclease monomer [Escherichia coli DEC5D]
gi|386798843|gb|AFJ31877.1| oligoribonuclease [Escherichia coli Xuzhou21]
gi|390636383|gb|EIN15967.1| oligoribonuclease [Escherichia coli FRIK1996]
gi|390636735|gb|EIN16308.1| oligoribonuclease [Escherichia coli FDA505]
gi|390637493|gb|EIN17041.1| oligoribonuclease [Escherichia coli FDA517]
gi|390655296|gb|EIN33254.1| oligoribonuclease [Escherichia coli FRIK1985]
gi|390656117|gb|EIN34010.1| oligoribonuclease [Escherichia coli 93-001]
gi|390657896|gb|EIN35704.1| oligoribonuclease [Escherichia coli FRIK1990]
gi|390673398|gb|EIN49642.1| oligoribonuclease [Escherichia coli PA3]
gi|390676723|gb|EIN52812.1| oligoribonuclease [Escherichia coli PA5]
gi|390680109|gb|EIN55965.1| oligoribonuclease [Escherichia coli PA9]
gi|390691095|gb|EIN65863.1| oligoribonuclease [Escherichia coli PA10]
gi|390695566|gb|EIN70093.1| oligoribonuclease [Escherichia coli PA14]
gi|390696630|gb|EIN71077.1| oligoribonuclease [Escherichia coli PA15]
gi|390710778|gb|EIN83780.1| oligoribonuclease [Escherichia coli PA22]
gi|390716189|gb|EIN89008.1| oligoribonuclease [Escherichia coli PA24]
gi|390717505|gb|EIN90290.1| oligoribonuclease [Escherichia coli PA25]
gi|390723499|gb|EIN96094.1| oligoribonuclease [Escherichia coli PA28]
gi|390735849|gb|EIO07214.1| oligoribonuclease [Escherichia coli PA31]
gi|390736372|gb|EIO07708.1| oligoribonuclease [Escherichia coli PA32]
gi|390740334|gb|EIO11475.1| oligoribonuclease [Escherichia coli PA33]
gi|390755113|gb|EIO24663.1| oligoribonuclease [Escherichia coli PA40]
gi|390755805|gb|EIO25334.1| oligoribonuclease [Escherichia coli PA39]
gi|390760835|gb|EIO30147.1| oligoribonuclease [Escherichia coli PA41]
gi|390763951|gb|EIO33171.1| oligoribonuclease [Escherichia coli PA42]
gi|390778120|gb|EIO45878.1| oligoribonuclease [Escherichia coli TW06591]
gi|390784241|gb|EIO51813.1| oligoribonuclease [Escherichia coli TW07945]
gi|390792450|gb|EIO59804.1| oligoribonuclease [Escherichia coli TW11039]
gi|390796400|gb|EIO63676.1| oligoribonuclease [Escherichia coli TW10246]
gi|390799131|gb|EIO66309.1| oligoribonuclease [Escherichia coli TW09098]
gi|390804019|gb|EIO71006.1| oligoribonuclease [Escherichia coli TW09109]
gi|390820501|gb|EIO86807.1| oligoribonuclease [Escherichia coli TW10119]
gi|390820712|gb|EIO86984.1| oligoribonuclease [Escherichia coli TW09195]
gi|390821766|gb|EIO87936.1| oligoribonuclease [Escherichia coli EC4203]
gi|390826830|gb|EIO92640.1| oligoribonuclease [Escherichia coli EC4196]
gi|390839428|gb|EIP03534.1| oligoribonuclease [Escherichia coli TW14313]
gi|390842016|gb|EIP05895.1| oligoribonuclease [Escherichia coli TW14301]
gi|390847227|gb|EIP10776.1| oligoribonuclease [Escherichia coli EC4421]
gi|390857736|gb|EIP20163.1| oligoribonuclease [Escherichia coli EC4422]
gi|390861971|gb|EIP24191.1| oligoribonuclease [Escherichia coli EC4013]
gi|390865501|gb|EIP27505.1| oligoribonuclease [Escherichia coli EC4402]
gi|390874349|gb|EIP35482.1| oligoribonuclease [Escherichia coli EC4439]
gi|390879752|gb|EIP40496.1| oligoribonuclease [Escherichia coli EC4436]
gi|390889544|gb|EIP49269.1| oligoribonuclease [Escherichia coli EC4437]
gi|390890448|gb|EIP50115.1| oligoribonuclease [Escherichia coli EC4448]
gi|390897476|gb|EIP56796.1| oligoribonuclease [Escherichia coli EC1738]
gi|390905246|gb|EIP64197.1| oligoribonuclease [Escherichia coli EC1734]
gi|390914063|gb|EIP72614.1| oligoribonuclease [Escherichia coli EC1845]
gi|390914910|gb|EIP73441.1| oligoribonuclease [Escherichia coli EC1863]
gi|408061840|gb|EKG96348.1| oligoribonuclease [Escherichia coli FRIK920]
gi|408062845|gb|EKG97346.1| oligoribonuclease [Escherichia coli PA34]
gi|408073251|gb|EKH07560.1| oligoribonuclease [Escherichia coli PA7]
gi|408079380|gb|EKH13498.1| oligoribonuclease [Escherichia coli FDA507]
gi|408087814|gb|EKH21223.1| oligoribonuclease [Escherichia coli FDA504]
gi|408092319|gb|EKH25509.1| oligoribonuclease [Escherichia coli FDA506]
gi|408093847|gb|EKH26901.1| oligoribonuclease [Escherichia coli FRIK1999]
gi|408100303|gb|EKH32816.1| oligoribonuclease [Escherichia coli FRIK1997]
gi|408105298|gb|EKH37498.1| oligoribonuclease [Escherichia coli NE1487]
gi|408111996|gb|EKH43686.1| oligoribonuclease [Escherichia coli NE037]
gi|408124495|gb|EKH55159.1| oligoribonuclease [Escherichia coli PA4]
gi|408133470|gb|EKH63371.1| oligoribonuclease [Escherichia coli FRIK2001]
gi|408134309|gb|EKH64143.1| oligoribonuclease [Escherichia coli PA23]
gi|408135808|gb|EKH65574.1| oligoribonuclease [Escherichia coli PA49]
gi|408143415|gb|EKH72723.1| oligoribonuclease [Escherichia coli PA45]
gi|408151548|gb|EKH80042.1| oligoribonuclease [Escherichia coli TT12B]
gi|408156280|gb|EKH84484.1| oligoribonuclease [Escherichia coli MA6]
gi|408160709|gb|EKH88705.1| oligoribonuclease [Escherichia coli 5905]
gi|408169738|gb|EKH96989.1| oligoribonuclease [Escherichia coli CB7326]
gi|408176340|gb|EKI03195.1| oligoribonuclease [Escherichia coli EC96038]
gi|408179512|gb|EKI06175.1| oligoribonuclease [Escherichia coli 5412]
gi|408209108|gb|EKI33717.1| oligoribonuclease [Escherichia coli PA38]
gi|408223004|gb|EKI46807.1| oligoribonuclease [Escherichia coli EC1735]
gi|408234253|gb|EKI57278.1| oligoribonuclease [Escherichia coli EC1736]
gi|408236520|gb|EKI59414.1| oligoribonuclease [Escherichia coli EC1737]
gi|408242482|gb|EKI65068.1| oligoribonuclease [Escherichia coli EC1846]
gi|408251078|gb|EKI72837.1| oligoribonuclease [Escherichia coli EC1847]
gi|408255532|gb|EKI76972.1| oligoribonuclease [Escherichia coli EC1848]
gi|408262261|gb|EKI83211.1| oligoribonuclease [Escherichia coli EC1849]
gi|408270501|gb|EKI90687.1| oligoribonuclease [Escherichia coli EC1850]
gi|408273457|gb|EKI93516.1| oligoribonuclease [Escherichia coli EC1856]
gi|408281722|gb|EKJ01117.1| oligoribonuclease [Escherichia coli EC1862]
gi|408287605|gb|EKJ06468.1| oligoribonuclease [Escherichia coli EC1864]
gi|408302724|gb|EKJ20228.1| oligoribonuclease [Escherichia coli EC1868]
gi|408303645|gb|EKJ21100.1| oligoribonuclease [Escherichia coli EC1866]
gi|408315257|gb|EKJ31586.1| oligoribonuclease [Escherichia coli EC1869]
gi|408320745|gb|EKJ36821.1| oligoribonuclease [Escherichia coli EC1870]
gi|408322267|gb|EKJ38261.1| oligoribonuclease [Escherichia coli NE098]
gi|408333548|gb|EKJ48497.1| oligoribonuclease [Escherichia coli FRIK523]
gi|408340962|gb|EKJ55437.1| oligoribonuclease [Escherichia coli 0.1304]
gi|408544033|gb|EKK21506.1| oligoribonuclease [Escherichia coli 5.2239]
gi|408544173|gb|EKK21633.1| oligoribonuclease [Escherichia coli 3.4870]
gi|408544759|gb|EKK22206.1| oligoribonuclease [Escherichia coli 6.0172]
gi|408562308|gb|EKK38473.1| oligoribonuclease [Escherichia coli 8.0586]
gi|408575351|gb|EKK51035.1| oligoribonuclease [Escherichia coli 10.0833]
gi|408576996|gb|EKK52577.1| oligoribonuclease [Escherichia coli 8.2524]
gi|408587779|gb|EKK62410.1| oligoribonuclease [Escherichia coli 10.0869]
gi|408592760|gb|EKK67122.1| oligoribonuclease [Escherichia coli 88.0221]
gi|408598049|gb|EKK72014.1| oligoribonuclease [Escherichia coli 8.0416]
gi|408607365|gb|EKK80769.1| oligoribonuclease [Escherichia coli 10.0821]
gi|427200715|gb|EKV71128.1| oligoribonuclease [Escherichia coli 89.0511]
gi|427200890|gb|EKV71302.1| oligoribonuclease [Escherichia coli 88.1042]
gi|427203591|gb|EKV73893.1| oligoribonuclease [Escherichia coli 88.1467]
gi|427216800|gb|EKV85895.1| oligoribonuclease [Escherichia coli 90.0091]
gi|427220810|gb|EKV89708.1| oligoribonuclease [Escherichia coli 90.2281]
gi|427223456|gb|EKV92204.1| oligoribonuclease [Escherichia coli 90.0039]
gi|427237062|gb|EKW04609.1| oligoribonuclease [Escherichia coli 93.0055]
gi|427237248|gb|EKW04792.1| oligoribonuclease [Escherichia coli 93.0056]
gi|427241579|gb|EKW09008.1| oligoribonuclease [Escherichia coli 94.0618]
gi|427254961|gb|EKW21243.1| oligoribonuclease [Escherichia coli 95.0183]
gi|427256406|gb|EKW22582.1| oligoribonuclease [Escherichia coli 95.1288]
gi|427256720|gb|EKW22874.1| oligoribonuclease [Escherichia coli 95.0943]
gi|427272556|gb|EKW37288.1| oligoribonuclease [Escherichia coli 96.0428]
gi|427273994|gb|EKW38660.1| oligoribonuclease [Escherichia coli 96.0427]
gi|427279870|gb|EKW44276.1| oligoribonuclease [Escherichia coli 96.0939]
gi|427288191|gb|EKW51837.1| oligoribonuclease [Escherichia coli 96.0932]
gi|427295323|gb|EKW58438.1| oligoribonuclease [Escherichia coli 96.0107]
gi|427296837|gb|EKW59885.1| oligoribonuclease [Escherichia coli 97.0003]
gi|427306707|gb|EKW69221.1| oligoribonuclease [Escherichia coli 97.1742]
gi|427309574|gb|EKW71883.1| oligoribonuclease [Escherichia coli 97.0007]
gi|427314666|gb|EKW76710.1| oligoribonuclease [Escherichia coli 99.0672]
gi|427324190|gb|EKW85674.1| oligoribonuclease [Escherichia coli 99.0678]
gi|427325586|gb|EKW87026.1| oligoribonuclease [Escherichia coli 99.0713]
gi|429250143|gb|EKY34811.1| oligoribonuclease [Escherichia coli 96.0109]
gi|429250436|gb|EKY35095.1| oligoribonuclease [Escherichia coli 97.0010]
gi|431134345|gb|ELE36296.1| oligoribonuclease [Escherichia coli KTE60]
gi|444534494|gb|ELV14726.1| oligoribonuclease [Escherichia coli 99.0814]
gi|444535633|gb|ELV15704.1| oligoribonuclease [Escherichia coli 09BKT078844]
gi|444544742|gb|ELV23760.1| oligoribonuclease [Escherichia coli 99.0815]
gi|444553856|gb|ELV31452.1| oligoribonuclease [Escherichia coli 99.0839]
gi|444558404|gb|ELV35690.1| oligoribonuclease [Escherichia coli 99.0848]
gi|444565299|gb|ELV42184.1| oligoribonuclease [Escherichia coli 99.0816]
gi|444571161|gb|ELV47655.1| oligoribonuclease [Escherichia coli 99.1775]
gi|444574844|gb|ELV51107.1| oligoribonuclease [Escherichia coli 99.1793]
gi|444584134|gb|ELV59796.1| oligoribonuclease [Escherichia coli 99.1753]
gi|444586801|gb|ELV62285.1| oligoribonuclease [Escherichia coli 99.1805]
gi|444588374|gb|ELV63759.1| oligoribonuclease [Escherichia coli ATCC 700728]
gi|444588847|gb|ELV64211.1| oligoribonuclease [Escherichia coli PA11]
gi|444602208|gb|ELV76958.1| oligoribonuclease [Escherichia coli PA19]
gi|444602590|gb|ELV77331.1| oligoribonuclease [Escherichia coli PA13]
gi|444611645|gb|ELV85972.1| oligoribonuclease [Escherichia coli PA2]
gi|444619498|gb|ELV93539.1| oligoribonuclease [Escherichia coli PA48]
gi|444621757|gb|ELV95726.1| oligoribonuclease [Escherichia coli PA47]
gi|444625756|gb|ELV99576.1| oligoribonuclease [Escherichia coli PA8]
gi|444634373|gb|ELW07852.1| oligoribonuclease [Escherichia coli 7.1982]
gi|444635732|gb|ELW09146.1| oligoribonuclease [Escherichia coli 99.1781]
gi|444640840|gb|ELW14091.1| oligoribonuclease [Escherichia coli 99.1762]
gi|444653115|gb|ELW25849.1| oligoribonuclease [Escherichia coli PA35]
gi|444656623|gb|ELW29147.1| oligoribonuclease [Escherichia coli 3.4880]
gi|444657831|gb|ELW30295.1| oligoribonuclease [Escherichia coli 95.0083]
gi|444666293|gb|ELW38371.1| oligoribonuclease [Escherichia coli 99.0670]
Length = 181
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDGWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|198284062|ref|YP_002220383.1| Exonuclease RNase T and DNA polymerase III [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218665313|ref|YP_002426714.1| oligoribonuclease Orn [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248583|gb|ACH84176.1| Exonuclease RNase T and DNA polymerase III [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218517526|gb|ACK78112.1| oligoribonuclease Orn [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 194
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 6/175 (3%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL D+ILEIA ++TD L EGP L +HQ + L ++ +W Q H
Sbjct: 8 LIWIDLEMTGLHPGQDQILEIATLVTDDSLRILCEGPVLAVHQPEFVLAALDDWNQRTHS 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L AE Q ++F+ ++V T T + GNSV D FL + MP L F
Sbjct: 68 TSGLLQRVRDSRLDMAAAETQTLDFLHQHVTTGTSPMCGNSVCQDRRFLARLMPRLERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVP--SKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS++K L RWYP +P SK ++H AL DIRES+ EL YY+E +F
Sbjct: 128 HYRMIDVSTVKELATRWYP----HLPKFSKAERHEALADIRESVAELAYYRERLF 178
>gi|311741236|ref|ZP_07715060.1| oligoribonuclease [Corynebacterium pseudogenitalium ATCC 33035]
gi|311303406|gb|EFQ79485.1| oligoribonuclease [Corynebacterium pseudogenitalium ATCC 33035]
Length = 215
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E I+E+A +ITDG L EG DLV+H T+E L M + H
Sbjct: 16 LVWIDLEMTGLDPERHVIVEVAAVITDGNLNILGEGIDLVVHATEEELAQMDSFVTEMHA 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
+SGL K++ S + EAE V+ + + P LAGNS+ D F++ YMP L S
Sbjct: 76 SSGLDKEICESTTSIGEAEDAVLALINEYCDPEHPAPLAGNSIATDRTFIRTYMPRLDSA 135
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RW+PR Y P K HRAL DI ESI EL +Y+ ++F+T+
Sbjct: 136 LHYRMIDVSTIKELARRWHPRAYFNQPDKGMAHRALQDIIESIRELDFYRRSVFRTD 192
>gi|257056841|ref|YP_003134673.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
viridis DSM 43017]
gi|256586713|gb|ACU97846.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
viridis DSM 43017]
Length = 202
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L +G DLVIH E L +M + + H
Sbjct: 5 LVWIDCEMTGLDLAKDALIEIAVLVTDAELNVLGDGVDLVIHADDEALANMPDVVREMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE++ + +++++V T LAGNS+ D F+ + MP L S
Sbjct: 65 RSGLTEEVRRSTMTLEEAERRALAYIREHVPEPKTAPLAGNSIATDRGFIARDMPTLDSY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DI+ESI ELKYY++ F
Sbjct: 125 LHYRMVDVSSIKELIRRWYPRIYYAKPEKGLAHRALADIKESIGELKYYRKTAF 178
>gi|405979956|ref|ZP_11038297.1| hypothetical protein HMPREF9241_01020 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391331|gb|EJZ86395.1| hypothetical protein HMPREF9241_01020 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 200
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 113/177 (63%), Gaps = 2/177 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL ++ D ++E+A +ITDG L G D++I L+ M ++ +N H
Sbjct: 1 MVWIDCEMTGLNVKADALVEVAVVITDGDLNIVDPGIDVLIKPPAAALEHMNDFVRNMHT 60
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYT-PLLAGNSVYVDFMFLKKYMPDLASL 189
SGL K+ L +GLT +EA QV+ +VK+ V T LLAGNSV D MFL++YMP +
Sbjct: 61 TSGLLKE-LENGLTLQEATDQVLSYVKQFVPTPGKALLAGNSVGTDKMFLEEYMPSVIDH 119
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVSS+K L RWYP + P+K HRAL DI ESI EL+Y++ +F ++
Sbjct: 120 LHYRIIDVSSLKELAKRWYPNAFYGAPTKHGGHRALADILESIQELEYFRRVLFPSH 176
>gi|359774455|ref|ZP_09277822.1| oligoribonuclease [Gordonia effusa NBRC 100432]
gi|359308341|dbj|GAB20600.1| oligoribonuclease [Gordonia effusa NBRC 100432]
Length = 214
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D+++EIA ++TD L +G D+VI + E L +M + + H
Sbjct: 20 LVWIDCEMTGLDTVNDKLIEIAALVTDSDLNILGDGVDIVIGASDEALANMPDVVKEMHA 79
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
+SGLT +V S +T +A+ +V+ +++K+V T + LAGNS+ D F+ + MP+L +
Sbjct: 80 SSGLTDEVRASTVTIEQAQAEVLAYIRKHVPTAGSVPLAGNSIATDRSFIARDMPELDAY 139
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RW+P+ Y P K HRAL DIRESI+EL+YY+ +F
Sbjct: 140 LHYRMVDVSSIKELCRRWFPKIYYGQPQKGLAHRALADIRESILELRYYRAAVF 193
>gi|291619097|ref|YP_003521839.1| Orn [Pantoea ananatis LMG 20103]
gi|386017349|ref|YP_005935647.1| oligoribonuclease Orn [Pantoea ananatis AJ13355]
gi|291154127|gb|ADD78711.1| Orn [Pantoea ananatis LMG 20103]
gi|327395429|dbj|BAK12851.1| oligoribonuclease Orn [Pantoea ananatis AJ13355]
Length = 194
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP + +HQ+ L M EW H
Sbjct: 21 LIWIDLEMTGLDPERDRIIEIATIVTDADLNILAEGPVMAVHQSDAQLALMDEWNVRTHT 80
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AEK +EF+++ V T + GNS+ D FL KYMP+L + F
Sbjct: 81 NSGLVERVKASKIDDRAAEKATIEFLQQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 140
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K H+ALDDIRES+ EL YY+++ +
Sbjct: 141 HYRYLDVSTLKELARRWKP-DILPGFKKSGSHQALDDIRESVAELAYYRQHFLQ 193
>gi|357590717|ref|ZP_09129383.1| oligoribonuclease [Corynebacterium nuruki S6-4]
Length = 209
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
TP + LVW D EMTGL ++EIA ++TD L EG D+VIH ++ L
Sbjct: 2 TPNQIAKNDRLVWADCEMTGLDTSRHVLVEIAVVVTDADLKPLDEGIDIVIHASEAELAE 61
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKK--NVGTYTPLLAGNSVYVDFMF 178
M E H +SGLT ++ S +T EAE+QVV+++K+ V PL GNS+ D F
Sbjct: 62 MDEVVVKMHGSSGLTDEIRASSVTVAEAERQVVDYIKRFVEVAGAAPL-CGNSIASDRKF 120
Query: 179 LKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYY 238
+ KYMP+L S + ++DVSSIK L RWYPR Y P K HRAL DIRESI EL YY
Sbjct: 121 IAKYMPELDSYLHYRMIDVSSIKELARRWYPRVYSGQPQKGLAHRALADIRESIRELDYY 180
Query: 239 KENIF 243
+ +F
Sbjct: 181 RRAVF 185
>gi|83745794|ref|ZP_00942851.1| Oligoribonuclease [Ralstonia solanacearum UW551]
gi|83727484|gb|EAP74605.1| Oligoribonuclease [Ralstonia solanacearum UW551]
Length = 289
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 125/226 (55%), Gaps = 23/226 (10%)
Query: 19 QVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEM 78
+V TP S ++SSS V +K A S +NL VW+D+EM
Sbjct: 70 RVSTPL--SQPGAASSSAAHVTNKIAAKSDNNL--------------------VWLDMEM 107
Query: 79 TGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKV 138
TGL E DRI+E+A ++TD +L EGP LVIHQ+ E LD M W + H SGL KV
Sbjct: 108 TGLSPENDRIIEVAMVVTDSELNVLAEGPVLVIHQSDEILDGMDAWNKGTHGRSGLIDKV 167
Query: 139 LHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVS 198
S TE +AE +++F+KK V + GNS+ D F+ +YMP L + F + +DVS
Sbjct: 168 KASTTTEAQAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYFHYRNLDVS 227
Query: 199 SIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
++K LC RW P K K Q+H A DI ESI EL+YY+++ +
Sbjct: 228 TLKELCKRWQP-AIAKGFIKRQQHTAYADIIESIEELRYYRQHFIR 272
>gi|386334076|ref|YP_006030247.1| oligoribonuclease [Ralstonia solanacearum Po82]
gi|334196526|gb|AEG69711.1| oligoribonuclease [Ralstonia solanacearum Po82]
Length = 289
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 125/226 (55%), Gaps = 23/226 (10%)
Query: 19 QVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEM 78
+V TP S ++SSS V +K A S +NL VW+D+EM
Sbjct: 70 RVSTPL--SQPGAASSSAAHVTNKIAAKSDNNL--------------------VWLDMEM 107
Query: 79 TGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKV 138
TGL E DRI+E+A ++TD +L EGP LVIHQ+ E LD M W + H SGL KV
Sbjct: 108 TGLSPENDRIIEVAMVVTDSELNVLAEGPVLVIHQSDEILDGMDAWNKGTHGRSGLIDKV 167
Query: 139 LHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVS 198
S TE +AE +++F+KK V + GNS+ D F+ +YMP L + F + +DVS
Sbjct: 168 KASTTTEAQAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYFHYRNLDVS 227
Query: 199 SIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
++K LC RW P K K Q+H A DI ESI EL+YY+++ +
Sbjct: 228 TLKELCKRWQP-AIAKGFIKRQQHTAYADIIESIEELRYYRQHFIR 272
>gi|315655740|ref|ZP_07908638.1| oligoribonuclease [Mobiluncus curtisii ATCC 51333]
gi|315489804|gb|EFU79431.1| oligoribonuclease [Mobiluncus curtisii ATCC 51333]
Length = 212
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 114/181 (62%), Gaps = 8/181 (4%)
Query: 66 EYKM------PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
EY+M P+VWID EMTGL + VD ++E+A I+TD +L G DL+I + ++
Sbjct: 4 EYRMGNKKTDPMVWIDCEMTGLDLHVDELIEVAVIVTDAELNPLDSGIDLLIKPSATAMN 63
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMF 178
MGE+ + H SGL K L +GL+ EA +QV+E+VK+ V LAGNSV+ D F
Sbjct: 64 HMGEFVREMHTKSGLLAK-LDTGLSVEEAGRQVLEYVKRLVPEPGKAQLAGNSVHSDKAF 122
Query: 179 LKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYY 238
L K MP+L + + ++DVS++K L MRWYP+ Y P K HRAL DI +S+ EL+YY
Sbjct: 123 LAKQMPELINWLHYRIIDVSTLKELAMRWYPKVYGLAPEKTGNHRALGDIIDSLNELRYY 182
Query: 239 K 239
+
Sbjct: 183 R 183
>gi|239917482|ref|YP_002957040.1| oligoribonuclease (3'->5' exoribonuclease) [Micrococcus luteus NCTC
2665]
gi|281414027|ref|ZP_06245769.1| oligoribonuclease (3'->5' exoribonuclease) [Micrococcus luteus NCTC
2665]
gi|239838689|gb|ACS30486.1| oligoribonuclease (3'->5' exoribonuclease) [Micrococcus luteus NCTC
2665]
Length = 208
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 59 SQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECL 118
S+T + PLVWID EMTGL +VD ++E+A +ITD +L EG DLVI +
Sbjct: 2 SETSIPTPESAPLVWIDCEMTGLHPQVDELVEVAVLITDAELNILDEGIDLVIRPSAAAF 61
Query: 119 DSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMF 178
+ M + ++ H SGL + L GL +A +V+E++ V LLAGN+V D +F
Sbjct: 62 EQMDPFVRDMHTTSGLLPE-LAEGLELDDAAARVLEYIAARVPAGKGLLAGNTVGQDKLF 120
Query: 179 LKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYY 238
L +YMP + + +VDVS++K L RWYPR Y + P+K HRAL DI++SI EL+YY
Sbjct: 121 LARYMPAVVDHLHYRIVDVSTVKELARRWYPRAYYQAPAKTGGHRALGDIKDSITELRYY 180
Query: 239 KENIF 243
+ +
Sbjct: 181 RAAVM 185
>gi|406975117|gb|EKD97982.1| hypothetical protein ACD_23C00644G0004 [uncultured bacterium]
Length = 195
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL+ + DR+LEIA I+T +L +EGP IHQ E L+ M W + H
Sbjct: 22 LVWLDCEMTGLEPDTDRLLEIAVIVTGPQLEPRIEGPVFAIHQADELLNKMDAWNKGTHG 81
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S +TE +AE+Q++EF+ + V T + GNS+ D FL +YMP L F
Sbjct: 82 RSGLIDKVKASAVTEADAEQQILEFLARYVPKGTAPMCGNSIGQDRRFLVRYMPKLERFF 141
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P Y K QKH AL D+ ESI EL +Y++++
Sbjct: 142 HYRNVDVSTLKELAKRWKPEAYSSF-KKAQKHTALADVHESIDELAHYRKHLL 193
>gi|207743707|ref|YP_002260099.1| oligoribonuclease protein [Ralstonia solanacearum IPO1609]
gi|206595106|emb|CAQ62033.1| oligoribonuclease protein [Ralstonia solanacearum IPO1609]
Length = 219
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 121/218 (55%), Gaps = 21/218 (9%)
Query: 27 SSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVD 86
S ++SSS V +K A S +NL VW+D+EMTGL E D
Sbjct: 6 SQPGAASSSAAHVTNKIAAKSDNNL--------------------VWLDMEMTGLSPEND 45
Query: 87 RILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTER 146
RI+E+A ++TD +L EGP LVIHQ+ E LD M W + H SGL KV S TE
Sbjct: 46 RIIEVAMVVTDSELNVLAEGPVLVIHQSDEILDGMDAWNKGTHGRSGLIDKVKASTTTEA 105
Query: 147 EAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMR 206
+AE +++F+KK V + GNS+ D F+ +YMP L + F + +DVS++K LC R
Sbjct: 106 QAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYFHYRNLDVSTLKELCKR 165
Query: 207 WYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
W P + K Q+H A DI ESI EL+YY+++ +
Sbjct: 166 WQPAIAKGF-IKRQQHTAYADIIESIEELRYYRQHFIR 202
>gi|53805219|ref|YP_113058.1| oligoribonuclease [Methylococcus capsulatus str. Bath]
gi|59798004|sp|Q60BD8.1|ORN_METCA RecName: Full=Oligoribonuclease
gi|53758980|gb|AAU93271.1| oligoribonuclease [Methylococcus capsulatus str. Bath]
Length = 181
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+EIA I+TDG+L EGP L IHQ + LD M +W + H
Sbjct: 8 LIWIDLEMTGLDPQNDAIIEIATIVTDGQLNVLAEGPVLAIHQPESVLDRMDDWNRKQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + E EAE + FV + V + GNS+ D FL + MP L + F
Sbjct: 68 ESGLTERVRRSTIGEAEAEHLTLGFVSEWVPPNESPICGNSICQDRRFLARCMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P ++ K+ HRALDDIRESI EL+YY++ + K
Sbjct: 128 HYRNLDVSTLKILVERWAPA-LKEGLQKQSTHRALDDIRESIAELRYYRDTVLK 180
>gi|156932395|ref|YP_001436311.1| oligoribonuclease [Cronobacter sakazakii ATCC BAA-894]
gi|156530649|gb|ABU75475.1| hypothetical protein ESA_00171 [Cronobacter sakazakii ATCC BAA-894]
Length = 185
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 12 LIWIDLEMTGLDPRQDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDDWNVRTHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 72 ASGLVDRVKASTMGDREAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ K
Sbjct: 132 HYRYLDVSTLKELARRWKPEVLDGL-KKQNTHQALDDIRESVAELAYYREHFIK 184
>gi|74317857|ref|YP_315597.1| oligoribonuclease [Thiobacillus denitrificans ATCC 25259]
gi|123611601|sp|Q3SHU1.1|ORN_THIDA RecName: Full=Oligoribonuclease
gi|74057352|gb|AAZ97792.1| Exonuclease [Thiobacillus denitrificans ATCC 25259]
Length = 182
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL E DRI+E+A ++TD L EGP LV+HQ +D+M W + H
Sbjct: 8 LLWLDMEMTGLSPESDRIIELAIVVTDADLNTVAEGPVLVVHQPDAVMDAMDSWNRGTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S L+E +AE Q++EFVK++V T + GNS+ D F+ ++MP+L + F
Sbjct: 68 KSGLIDRVKASQLSESDAEAQMLEFVKQHVSPRTSPMCGNSICQDRRFMARHMPELEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P K KH AL DI ESI EL+YY+E+ +
Sbjct: 128 HYRNLDVSTLKELAKRWRP-GLCDAFKKSNKHEALADIYESIDELRYYREHFIRA 181
>gi|289672571|ref|ZP_06493461.1| oligoribonuclease [Pseudomonas syringae pv. syringae FF5]
Length = 178
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+EIA IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEIATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLHRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|425291385|ref|ZP_18682185.1| oligoribonuclease [Escherichia coli 3006]
gi|408208266|gb|EKI32921.1| oligoribonuclease [Escherichia coli 3006]
Length = 181
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 SSGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|161486369|ref|NP_839708.2| oligoribonuclease [Shigella flexneri 2a str. 2457T]
gi|229774924|ref|YP_691603.2| oligoribonuclease [Shigella flexneri 5 str. 8401]
gi|415860121|ref|ZP_11534195.1| exonuclease family protein [Shigella flexneri 2a str. 2457T]
gi|417699954|ref|ZP_12349102.1| exonuclease family protein [Shigella flexneri K-218]
gi|417705311|ref|ZP_12354386.1| exonuclease family protein [Shigella flexneri VA-6]
gi|417726108|ref|ZP_12374885.1| exonuclease family protein [Shigella flexneri K-304]
gi|417731346|ref|ZP_12380023.1| exonuclease family protein [Shigella flexneri K-671]
gi|417731707|ref|ZP_12380380.1| exonuclease family protein [Shigella flexneri 2747-71]
gi|417741247|ref|ZP_12389809.1| exonuclease family protein [Shigella flexneri 4343-70]
gi|417746243|ref|ZP_12394758.1| oligoribonuclease monomer [Shigella flexneri 2930-71]
gi|418260589|ref|ZP_12883060.1| oligoribonuclease monomer [Shigella flexneri 6603-63]
gi|420328983|ref|ZP_14830701.1| oligoribonuclease [Shigella flexneri K-1770]
gi|420344826|ref|ZP_14846280.1| oligoribonuclease [Shigella flexneri K-404]
gi|420377890|ref|ZP_14877434.1| oligoribonuclease [Shigella flexneri 1235-66]
gi|424840449|ref|ZP_18265086.1| oligoribonuclease [Shigella flexneri 5a str. M90T]
gi|41017443|sp|Q83IJ9.3|ORN_SHIFL RecName: Full=Oligoribonuclease
gi|313646361|gb|EFS10823.1| exonuclease family protein [Shigella flexneri 2a str. 2457T]
gi|332749041|gb|EGJ79464.1| exonuclease family protein [Shigella flexneri K-671]
gi|332749309|gb|EGJ79730.1| exonuclease family protein [Shigella flexneri 4343-70]
gi|332761883|gb|EGJ92157.1| exonuclease family protein [Shigella flexneri 2747-71]
gi|332763212|gb|EGJ93455.1| oligoribonuclease monomer [Shigella flexneri 2930-71]
gi|333009212|gb|EGK28668.1| exonuclease family protein [Shigella flexneri K-218]
gi|333010312|gb|EGK29745.1| exonuclease family protein [Shigella flexneri VA-6]
gi|333011977|gb|EGK31362.1| exonuclease family protein [Shigella flexneri K-304]
gi|383469501|gb|EID64522.1| oligoribonuclease [Shigella flexneri 5a str. M90T]
gi|391260479|gb|EIQ19537.1| oligoribonuclease [Shigella flexneri K-404]
gi|391261821|gb|EIQ20866.1| oligoribonuclease [Shigella flexneri K-1770]
gi|391293130|gb|EIQ51424.1| oligoribonuclease [Shigella flexneri 1235-66]
gi|397893242|gb|EJL09702.1| oligoribonuclease monomer [Shigella flexneri 6603-63]
Length = 181
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEVYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|406946742|gb|EKD77849.1| hypothetical protein ACD_42C00153G0002 [uncultured bacterium]
Length = 180
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E +RI+E+A +IT+ L E P IHQ + LD M W HH
Sbjct: 9 LVWIDLEMTGLDCERERIIEMAAVITNSNLDVLAESPVFAIHQPQSLLDGMDGWNIKHHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +TE +AE ++ F+K+ V + GNS++ D FL KYMP L F
Sbjct: 69 QSGLVRRVQMSVVTESQAEASMLAFLKEFVPPQKSPMCGNSIWQDRRFLAKYMPQLEKFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ L+DVS++K + RWYP + KE H+AL D+R+SI EL+YY+ ++ K
Sbjct: 129 HYRLLDVSTLKIITQRWYPS--LQGFKKESTHQALQDVRDSIEELRYYRTHLLK 180
>gi|169847019|ref|XP_001830222.1| oligoribonuclease [Coprinopsis cinerea okayama7#130]
gi|116508698|gb|EAU91593.1| oligoribonuclease [Coprinopsis cinerea okayama7#130]
Length = 216
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 117/205 (57%), Gaps = 24/205 (11%)
Query: 59 SQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECL 118
+ PLEF+ P+VW+DLEMTGL + D+I+EIA +IT+G L +G +I K L
Sbjct: 4 THKPLEFD-DGPIVWVDLEMTGLNPQKDKIIEIAVLITNGNLELVDDGIQYIIRAEKSLL 62
Query: 119 DSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFM 177
D M EWC H SGLT+ L S T +K+V+ ++KK + +LAGNSV+VD
Sbjct: 63 DGMDEWCTKQHGQSGLTQACLRSPYTTEYVKKEVLAYIKKWIPRQRVGVLAGNSVHVDRT 122
Query: 178 FLKKYMPDLASLFSHVLVDVSSIKA-----------------LCMRWYPRDYRKVPSK-- 218
FL MP++ + ++DVSS+K L RW+P KVP K
Sbjct: 123 FLAAEMPEIVDWLHYRIIDVSSVKVARLSVSPFDVSSYELQELSRRWFP---NKVPPKNP 179
Query: 219 EQKHRALDDIRESIMELKYYKENIF 243
E HRALDDI+ SI ELK+Y+ENIF
Sbjct: 180 ESSHRALDDIQGSIQELKWYRENIF 204
>gi|452959161|gb|EME64501.1| oligoribonuclease [Amycolatopsis decaplanina DSM 44594]
Length = 202
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L EG D+VIH E LD M E + H
Sbjct: 5 LVWIDCEMTGLDLGKDALIEIAALVTDAELNVLGEGVDIVIHAGDETLDGMPEVVREMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT++V S +T EAE++V+E+++ +V P LAGNS+ D F+ + MP L +
Sbjct: 65 RSGLTEEVRRSTVTMEEAEQRVLEYIRTHVPEANVAP-LAGNSIATDRGFITRDMPLLDA 123
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DI+ESI EL YY+ F
Sbjct: 124 HLHYRMVDVSSVKELVRRWYPRIYYAKPEKGLAHRALADIKESIGELDYYRRVAF 178
>gi|387130603|ref|YP_006293493.1| 3'-to-5' oligoribonuclease [Methylophaga sp. JAM7]
gi|386271892|gb|AFJ02806.1| 3'-to-5' oligoribonuclease (orn) [Methylophaga sp. JAM7]
Length = 183
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+EIA I+TD L EGP + IHQ+ LD M EW H
Sbjct: 8 LIWIDLEMTGLDTQNDSIIEIATIVTDANLNILAEGPIIAIHQSGSKLDGMDEWNTRQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGLT++V S TE +AE + + F+K+ V T + GNS+ D F+ + MP+L + F
Sbjct: 68 SSGLTERVRSSTYTEAQAEAETLAFLKQYVPANTSPMCGNSICQDRRFMARCMPELEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSS+K L RW P+ K K+ H A+DDI++SI EL++Y+E + K
Sbjct: 128 HYRNLDVSSLKELARRWAPK-VEKAFKKKSSHLAMDDIKDSIRELQHYREFLIK 180
>gi|448824051|ref|YP_007417220.1| putative oligoribonuclease [Corynebacterium urealyticum DSM 7111]
gi|448277548|gb|AGE36972.1| putative oligoribonuclease [Corynebacterium urealyticum DSM 7111]
Length = 209
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW D EMTGL + ++EIA I+TD +L EG DLVIH T++ L M ++ QN H
Sbjct: 13 IVWADCEMTGLDPDRHVLVEIAVIVTDAELRPLDEGIDLVIHATEDELAEMDDFVQNMHA 72
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT+++ S L+ EAE+QV+++V++ V LAGNS+ D F+ KYMP L
Sbjct: 73 RSGLTEQIRESTLSLAEAEQQVLQYVQRYVEVERAAPLAGNSIGTDRRFIAKYMPKLDEF 132
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYP+ Y P K HRAL DI+ESI EL +Y+ I
Sbjct: 133 LHYRMIDVSSIKELARRWYPKVYAGQPQKGLSHRALADIQESIQELAFYRHAIM 186
>gi|429085068|ref|ZP_19148052.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter condimenti 1330]
gi|426545908|emb|CCJ74093.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter condimenti 1330]
Length = 181
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPRQDRIIEIATLVTDADLNILAEGPVIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S + E EAE+ +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVDRVKASTMGEHEAERATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEVLDGL-KKQNTHQALDDIRESVAELAYYREHFIK 180
>gi|391338340|ref|XP_003743517.1| PREDICTED: oligoribonuclease, mitochondrial-like [Metaseiulus
occidentalis]
Length = 193
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 112/175 (64%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID+EMTGL + D I+E AC++T+ L++ +V+H L++M EWC+ H
Sbjct: 19 IVWIDMEMTGLNPDKDTIMEAACVVTEADLSEVARIDKIVVHHPSYVLNAMDEWCKTTHG 78
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + L S L+ +EAE ++++ + ++ L GNSV+ D MF+++Y+P +
Sbjct: 79 KSGLTAECLQSTLSIQEAEDRILKLLVEHTNPGEAPLGGNSVHADRMFIRRYLPRVYDHL 138
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
++ ++DVSSI+ LC RW + K P K + HRAL+DI ESI ELKY+KE+ T
Sbjct: 139 NYRIIDVSSIRELCHRWNLSVFEKRPRKGENHRALEDILESIEELKYFKEHFLIT 193
>gi|384085669|ref|ZP_09996844.1| oligoribonuclease [Acidithiobacillus thiooxidans ATCC 19377]
Length = 187
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 106/178 (59%), Gaps = 2/178 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL E D ILEIA I+TD +L EGP L +H L M +W Q H
Sbjct: 8 LVWVDLEMTGLHPEQDEILEIASIVTDNQLRIICEGPVLAVHHPDTVLAKMDDWNQRTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L + E Q ++F+ +V T + GNSV D FL + MP L F
Sbjct: 68 QSGLIQRVRESRLDTQAVETQTLDFLSAHVAAGTSPICGNSVCQDRRFLARLMPRLERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLK 248
+ ++DVS++K L RWYP + K SK +KH AL DIRESI EL YY+E IF L+
Sbjct: 128 HYRMIDVSTLKELTSRWYP-GFPKF-SKAEKHEALADIRESIDELAYYREKIFPQLLE 183
>gi|145542502|ref|XP_001456938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424752|emb|CAK89541.1| unnamed protein product [Paramecium tetraurelia]
Length = 176
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Query: 76 LEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLT 135
+EMTGL + D+ILEIAC++TD KL ++GP LVIH + L+ M +WC H+ASGL
Sbjct: 1 MEMTGLNVFQDQILEIACVLTDFKLETIIKGPHLVIHADNQVLEGMDQWCTKTHKASGLY 60
Query: 136 KKVLHSGLTEREAEKQVVEFV-KKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVL 194
++ L S L ++AE+Q++ F+ + N+ LAGNSVY+D +F+ K MP L + +
Sbjct: 61 EESLKSTLNVQQAEEQILNFLNQNNIPPKVLPLAGNSVYMDRLFVMKNMPKLDQFLHYRI 120
Query: 195 VDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
VDVSS++ LC R P P K+ HRALDDI ESI EL+YY++
Sbjct: 121 VDVSSVQLLCRRLNPYVCNHQPQKKLNHRALDDILESIEELRYYQK 166
>gi|34497823|ref|NP_902038.1| oligoribonuclease [Chromobacterium violaceum ATCC 12472]
gi|41017434|sp|Q7NVH5.1|ORN_CHRVO RecName: Full=Oligoribonuclease
gi|34103679|gb|AAQ60040.1| oligoribonuclease protein [Chromobacterium violaceum ATCC 12472]
Length = 181
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+E+A I+TD L E P LVIHQ LD M +W +N H
Sbjct: 8 LIWLDMEMTGLNPDQDRIIEVAMIVTDSNLNVLAESPVLVIHQPDAILDGMDDWNKNTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +KV +S ++E EAE+ ++EF+ ++V + GN+++ D F+ ++MP L + F
Sbjct: 68 KSGLIEKVKNSTVSEAEAEQLLLEFMMQHVPERATPMCGNTIHQDRRFMARWMPKLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K LC RW P + V K KH AL DI ESI E++YY+E+ K
Sbjct: 128 HYRNLDVSTLKELCKRWRPEIAKGV-VKRGKHEALADILESIEEMRYYREHFLKV 181
>gi|260599488|ref|YP_003212059.1| oligoribonuclease [Cronobacter turicensis z3032]
gi|417789487|ref|ZP_12437131.1| oligoribonuclease [Cronobacter sakazakii E899]
gi|424801196|ref|ZP_18226738.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 696]
gi|429088229|ref|ZP_19150961.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter universalis NCTC
9529]
gi|429101925|ref|ZP_19163899.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter turicensis 564]
gi|429106272|ref|ZP_19168141.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter malonaticus 681]
gi|429116940|ref|ZP_19177858.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 701]
gi|449306687|ref|YP_007439043.1| oligoribonuclease [Cronobacter sakazakii SP291]
gi|260218665|emb|CBA34001.1| Oligoribonuclease [Cronobacter turicensis z3032]
gi|333956393|gb|EGL74052.1| oligoribonuclease [Cronobacter sakazakii E899]
gi|423236917|emb|CCK08608.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 696]
gi|426288574|emb|CCJ90012.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter turicensis 564]
gi|426292995|emb|CCJ94254.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter malonaticus 681]
gi|426320069|emb|CCK03971.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 701]
gi|426508032|emb|CCK16073.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter universalis NCTC
9529]
gi|449096720|gb|AGE84754.1| oligoribonuclease [Cronobacter sakazakii SP291]
Length = 181
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPRQDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVDRVKASTMGDREAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEVLDGL-KKQNTHQALDDIRESVAELAYYREHFIK 180
>gi|445495698|ref|ZP_21462742.1| oligoribonuclease Orn [Janthinobacterium sp. HH01]
gi|444791859|gb|ELX13406.1| oligoribonuclease Orn [Janthinobacterium sp. HH01]
Length = 198
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 3/184 (1%)
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
TP + E+ LVW+D+EMTGL+ + DRI+E+A +ITD L EGP IHQ+ E LD
Sbjct: 17 TPRQNEFN--LVWVDMEMTGLEPDTDRIIEVAVVITDMHLNVLAEGPVFAIHQSDETLDK 74
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLK 180
M W + H SGL +V S ++E EAE+++++F+K+ V + GN++ D F+
Sbjct: 75 MDAWNKGTHGRSGLIDRVKASTVSEAEAEEELIKFMKQWVPKGKAPMCGNTIGQDRRFMV 134
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
+YMP L + F + +DVS++K LC RW P K QKH A+ DI ESI ELKYY+E
Sbjct: 135 RYMPKLEAYFHYRNIDVSTLKELCKRWKPEIVGGF-KKHQKHTAMADIIESIDELKYYRE 193
Query: 241 NIFK 244
+ K
Sbjct: 194 HFIK 197
>gi|300940651|ref|ZP_07155212.1| exonuclease [Escherichia coli MS 21-1]
gi|300454539|gb|EFK18032.1| exonuclease [Escherichia coli MS 21-1]
Length = 199
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 26 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 86 ASGLVERVKASTMGDREAELATLEFLKQWVPEGKSPICGNSIGQDRRFLFKYMPELEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPAILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|208806770|ref|ZP_03249107.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4206]
gi|208726571|gb|EDZ76172.1| oligoribonuclease [Escherichia coli O157:H7 str. EC4206]
Length = 188
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDGWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|333902289|ref|YP_004476162.1| oligoribonuclease [Pseudomonas fulva 12-X]
gi|333117554|gb|AEF24068.1| Oligoribonuclease [Pseudomonas fulva 12-X]
Length = 189
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E D I+E+A I+TD +L EGP + +HQ+ E L +M EW H
Sbjct: 16 LIWIDLEMTGLDPETDVIIEMATIVTDSELNVLAEGPVIAVHQSDERLAAMDEWNTRTHG 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +++ EAE Q + F+++ V + GNS+ D FL KYMP L + F
Sbjct: 76 ESGLTQRVRDSKISQAEAEAQTIAFLERWVPKGKSPICGNSIGQDRRFLYKYMPALEAYF 135
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P ++ K H+ALDDIRESI ELKYY++++ +
Sbjct: 136 HYRYLDVSTLKILAERWAP-GVKEGFVKTGTHQALDDIRESIAELKYYRQHLLRV 189
>gi|393757499|ref|ZP_10346323.1| oligoribonuclease [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393165191|gb|EJC65240.1| oligoribonuclease [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 181
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL + +RI+E+A ++T+ LT EGP LV+HQ+ LD M W + H
Sbjct: 8 LVWLDMEMTGLDPDKERIIEVAVVVTEADLTLVAEGPVLVVHQSNTLLDGMDAWNKGTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE Q++EF+K++V L GN++ D F+ +YMP L + F
Sbjct: 68 RSGLIDKVKASTLTEAQAEDQLLEFLKEHVPAGKSPLCGNTISQDRRFMYRYMPRLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L +RW P D K K+ +H AL DI ESI ELK+Y+E+ +
Sbjct: 128 HYRNLDVSTLKELALRWKP-DVVKSFVKQSRHEALADIYESIDELKHYREHFIR 180
>gi|419139644|ref|ZP_13684428.1| oligoribonuclease [Escherichia coli DEC5E]
gi|377978442|gb|EHV41721.1| oligoribonuclease [Escherichia coli DEC5E]
Length = 181
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDGWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELACRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|300704711|ref|YP_003746314.1| oligoribonuclease [Ralstonia solanacearum CFBP2957]
gi|299072375|emb|CBJ43713.1| oligoribonuclease [Ralstonia solanacearum CFBP2957]
Length = 219
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 120/218 (55%), Gaps = 21/218 (9%)
Query: 27 SSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVD 86
S ++SSS V +K A S +NL VW+D+EMTGL E D
Sbjct: 6 SQPGAASSSAAHVTNKIAAKSDNNL--------------------VWLDMEMTGLSPEND 45
Query: 87 RILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTER 146
RI+E+A ++TD +L EGP LVIHQ E LD M W + H SGL KV S TE
Sbjct: 46 RIIEVAMVVTDSELNVLAEGPVLVIHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEA 105
Query: 147 EAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMR 206
+AE +++F+KK V + GNS+ D F+ +YMP L + F + +DVS++K LC R
Sbjct: 106 QAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYFHYRNLDVSTLKELCKR 165
Query: 207 WYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
W P + K Q+H A DI ESI EL+YY+++ +
Sbjct: 166 WQPAIAKGF-IKRQQHTAYADIVESIEELRYYRQHFIR 202
>gi|255324289|ref|ZP_05365410.1| oligoribonuclease [Corynebacterium tuberculostearicum SK141]
gi|255298619|gb|EET77915.1| oligoribonuclease [Corynebacterium tuberculostearicum SK141]
Length = 215
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 107/177 (60%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E I+E+A +ITDG L EG DLV+H T++ L M + H
Sbjct: 16 LVWIDLEMTGLDPERHVIVEVAAVITDGNLNILGEGIDLVVHATEDELAQMDSFVTQMHA 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
SGL K++ S + EAE V+ + ++ P LAGNS+ D F++ YMP L S
Sbjct: 76 KSGLDKEIRESTTSIGEAEDAVLALINEHCDPEHPAPLAGNSIATDRTFIRTYMPRLDSA 135
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RW+PR Y P K HRAL DI ESI EL +Y+ ++F+T+
Sbjct: 136 LHYRMIDVSTIKELARRWHPRAYFNQPDKGMAHRALQDIIESIRELDFYRRSVFRTD 192
>gi|238750063|ref|ZP_04611566.1| Oligoribonuclease [Yersinia rohdei ATCC 43380]
gi|238711607|gb|EEQ03822.1| Oligoribonuclease [Yersinia rohdei ATCC 43380]
Length = 181
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPQRDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + + +AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVARVKASTINDHDAELQTIEFLKQWVPAGASPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKP---EILPGFKKQNTHQALDDIRESVAELAYYREHFIQ 180
>gi|12519147|gb|AAG59361.1|AE005649_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13364618|dbj|BAB38564.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209750348|gb|ACI73481.1| hypothetical protein ECs5141 [Escherichia coli]
gi|209750350|gb|ACI73482.1| hypothetical protein ECs5141 [Escherichia coli]
gi|209750352|gb|ACI73483.1| hypothetical protein ECs5141 [Escherichia coli]
gi|209750354|gb|ACI73484.1| hypothetical protein ECs5141 [Escherichia coli]
gi|209750356|gb|ACI73485.1| hypothetical protein ECs5141 [Escherichia coli]
Length = 204
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M W H
Sbjct: 31 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDGWNVRTHT 90
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 91 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 150
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 151 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 203
>gi|330815929|ref|YP_004359634.1| oligoribonuclease [Burkholderia gladioli BSR3]
gi|327368322|gb|AEA59678.1| oligoribonuclease [Burkholderia gladioli BSR3]
Length = 202
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL + DRI+EIA ++T+ L K+VEGP L IHQ+ E L M W Q+ H
Sbjct: 20 LVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDKAVEGPVLAIHQSDETLARMDAWNQSTHG 79
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E EA ++ F+ + V + GNS+ D F+ ++MP+L S F
Sbjct: 80 RSGLIDRVRASTVSEAEAAARIQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPELESFF 139
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E+
Sbjct: 140 HYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYREHFL 191
>gi|170696330|ref|ZP_02887460.1| Exonuclease RNase T and DNA polymerase III [Burkholderia graminis
C4D1M]
gi|170138736|gb|EDT06934.1| Exonuclease RNase T and DNA polymerase III [Burkholderia graminis
C4D1M]
Length = 203
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
M LVW+D+EMTGL + DRI+EIA ++T+ L + EGP L IHQ+ E L M +W QN
Sbjct: 18 MNLVWLDMEMTGLDPDSDRIIEIAVVVTNSTLDRMAEGPVLAIHQSDETLAKMDQWNQNT 77
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
H SGL +V S ++E EA +Q+ F+ + V + GNS+ D F+ ++MP+L +
Sbjct: 78 HGRSGLIDRVKASTVSEIEATEQIRAFLAQYVPPGKSPMCGNSICQDRRFMARWMPELET 137
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E+
Sbjct: 138 FFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYREHFL 191
>gi|353234360|emb|CCA66386.1| related to REX2-Oligoribonuclease, mitochondrial precursor
[Piriformospora indica DSM 11827]
Length = 243
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 113/178 (63%), Gaps = 4/178 (2%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLV++DLEMTGL+ + D ILE+A IIT+G L + + VI K+ LD M EWC H
Sbjct: 46 PLVFVDLEMTGLEFKRDVILEVAIIITNGDLERVDQPFSYVIRTEKKRLDEMDEWCTKTH 105
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLTK + S + E + +E++KK V +T +LAG+SV+ D FL ++MP +
Sbjct: 106 GESGLTKACIESPYSHEWVEAKALEYIKKWVPEKWTGVLAGSSVHADRAFLVEHMPSITE 165
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRK---VPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVS++K L RWYP RK PS +HRALDDI+ SI EL++Y+ENIF
Sbjct: 166 WLHYRIVDVSTVKELNKRWYPHISRKPEDYPSNGVQHRALDDIQASIRELQWYRENIF 223
>gi|422908874|ref|ZP_16943536.1| oligoribonuclease [Vibrio cholerae HE-09]
gi|341637662|gb|EGS62339.1| oligoribonuclease [Vibrio cholerae HE-09]
Length = 181
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + I+Q + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVITIYQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E EA +Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 ASGLVARVRQSQVSEDEAIEQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P + K SK H ALDDIRESI EL++Y++++FK
Sbjct: 128 HYRYIDVSTIKELTRRWQP-EVLKAFSKTGSHLALDDIRESIAELQFYRKSVFK 180
>gi|54023254|ref|YP_117496.1| oligoribonuclease [Nocardia farcinica IFM 10152]
gi|59797997|sp|Q5Z0A9.1|ORN_NOCFA RecName: Full=Oligoribonuclease
gi|54014762|dbj|BAD56132.1| putative oligoribonuclease [Nocardia farcinica IFM 10152]
Length = 216
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D EMTGL+++ D+++E++ ++TD L +G D+VIH L +M H
Sbjct: 6 VVWMDCEMTGLRLDSDKLIEVSALVTDSDLNILGDGVDIVIHADDAALAAMPPVVAEMHA 65
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T EAE+QV++++++ V T T LAGNS+ D F+ + MP L +
Sbjct: 66 RSGLTDEVRRSTVTVAEAEQQVLDYIRQYVPTPRTVPLAGNSIATDRAFIARDMPALDAH 125
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 126 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLTHRALADIKESIRELEYYRRTAF 179
>gi|322801322|gb|EFZ22009.1| hypothetical protein SINV_80878 [Solenopsis invicta]
Length = 198
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 113/173 (65%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D+EMTGL++E ILE+AC +TD L + + ++VI+Q+ + L +M +WC+ H+
Sbjct: 24 IVWLDMEMTGLEVETCHILEVACFVTDEHLELASDYLNIVIYQSDKVLQNMSDWCKLQHK 83
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL + S T EA+ + F++ +V T LAGNSVY+D MFL+KYMP + +
Sbjct: 84 KSGLIDECRLSKTTLAEAQDKTTRFLENHVPRGTCPLAGNSVYMDRMFLRKYMPLVDNYL 143
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RW P + P K+ HRA DI++S+ EL+YYK+ +F
Sbjct: 144 HYRIIDVSSIKDLARRWQPTISKAAPKKQHAHRAEHDIKDSLNELRYYKKYLF 196
>gi|449143315|ref|ZP_21774153.1| oligoribonuclease [Vibrio mimicus CAIM 602]
gi|449081055|gb|EMB51951.1| oligoribonuclease [Vibrio mimicus CAIM 602]
Length = 181
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E EA Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 GSGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ +FK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKTVFK 180
>gi|344915382|ref|NP_710030.4| hypothetical protein SF4319 [Shigella flexneri 2a str. 301]
gi|384545840|ref|YP_005729904.1| oligoribonuclease [Shigella flexneri 2002017]
gi|30043801|gb|AAP19520.1| hypothetical protein S4584 [Shigella flexneri 2a str. 2457T]
gi|56384132|gb|AAN45737.2| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110617631|gb|ABF06298.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281603627|gb|ADA76611.1| Oligoribonuclease [Shigella flexneri 2002017]
Length = 204
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 31 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 90
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L F
Sbjct: 91 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEVYF 150
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 151 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 203
>gi|344345316|ref|ZP_08776170.1| Oligoribonuclease [Marichromatium purpuratum 984]
gi|343803145|gb|EGV21057.1| Oligoribonuclease [Marichromatium purpuratum 984]
Length = 182
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRILEIA I+TD +L EGP + IHQ++ L M EW + HH
Sbjct: 8 LIWIDLEMTGLDPDTDRILEIATIVTDTQLKVLAEGPVIAIHQSEAQLAGMDEWNREHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S E AE+ +EF+ V L GNS+ D FL ++MP L
Sbjct: 68 ASGLIERVRLSAQDEAAAERATLEFLADLVPAGASPLCGNSICQDRRFLARWMPRLEGFC 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P V K +H ALDDIRESI EL+YY+E + +
Sbjct: 128 HYRNLDVSTLKILAQRWAPEVAAGV-RKASRHLALDDIRESIEELRYYREQLLR 180
>gi|395008956|ref|ZP_10392541.1| oligoribonuclease (3'->5' exoribonuclease) [Acidovorax sp. CF316]
gi|394313010|gb|EJE50100.1| oligoribonuclease (3'->5' exoribonuclease) [Acidovorax sp. CF316]
Length = 195
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 105/178 (58%), Gaps = 1/178 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL+ + DR+LEIA ++T L VEGP IHQ+ L+ M W + H
Sbjct: 19 LVWLDCEMTGLEPDTDRLLEIAVVVTGPTLEPRVEGPVFAIHQSDALLNGMDAWNKGTHG 78
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S +TE EAE+Q++ F+ + V T + GNS+ D FL +YMP L F
Sbjct: 79 RSGLIDKVKASTVTEEEAEQQIIAFLAQYVPKGTAPMCGNSIGQDRRFLVRYMPKLEKFF 138
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLK 248
+ VDVS++K L RW P Y K QKH AL D+ ESI EL +Y+E++ K
Sbjct: 139 HYRNVDVSTLKELAKRWKPEAYTSF-KKAQKHTALADVHESIDELAHYREHLLSVGAK 195
>gi|384567066|ref|ZP_10014170.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
glauca K62]
gi|384522920|gb|EIF00116.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
glauca K62]
Length = 202
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L EG DLVIH E L +M + ++ H
Sbjct: 5 LVWIDCEMTGLDLAKDALIEIAVLVTDAELNVLGEGVDLVIHADDEALANMPDVVRDMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE++ + ++++ V T LAGNS+ D F+ + MP L +
Sbjct: 65 RSGLTEEVRRSTMTLEEAERRALAYIREYVPDPQTAPLAGNSIATDRGFIARDMPALDAH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DI+ESI ELKYY+ F
Sbjct: 125 LHYRMVDVSSIKELVRRWYPRVYYAKPEKGLAHRALADIKESIGELKYYRRTAF 178
>gi|451945000|ref|YP_007465636.1| oligoribonuclease [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451904387|gb|AGF73274.1| oligoribonuclease [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 226
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL +E I+E+A ++TD L EG DLV+H T+E L M ++ N H
Sbjct: 27 LVWVDLEMTGLDLERHVIVEVAALVTDADLNILGEGVDLVVHATEEELAQMDDFVANMHN 86
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
+GLT ++ S +T +AE V+E + ++ P LAGNS+ D F+ + MP L +
Sbjct: 87 ENGLTAQIRESTVTMAQAEDAVLELIAEHCSPEHPAPLAGNSIATDRAFIHEQMPRLDAA 146
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RW+P+ Y P+K HRAL DI ESI EL YY+ +F
Sbjct: 147 LHYRMVDVSSVKELARRWFPKAYYNQPAKGMAHRALADIVESIRELDYYRRAVF 200
>gi|340788410|ref|YP_004753875.1| oligoribonuclease [Collimonas fungivorans Ter331]
gi|340553677|gb|AEK63052.1| Oligoribonuclease [Collimonas fungivorans Ter331]
Length = 202
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 5/183 (2%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P EF L+W+D+EMTGL + DRI+E+A ++TD +L EGP IHQ E +D M
Sbjct: 24 PNEFN----LIWVDMEMTGLNPDSDRIIEVAVVVTDPQLNILAEGPVFAIHQADEIMDGM 79
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
W + H SGL +KV +S +TE EAE ++EF+KK V + GN++ D F+ +
Sbjct: 80 DAWNKGTHGRSGLIEKVKNSTVTESEAELALIEFLKKYVPNGKSPMCGNTICQDRRFMAR 139
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
MP L + F + +DVS++K LC RW P + K QKH AL DI ESI EL+YY+E+
Sbjct: 140 GMPKLEAFFHYRNLDVSTLKELCRRWKP-ELASGFKKHQKHTALADIIESIEELRYYREH 198
Query: 242 IFK 244
K
Sbjct: 199 FIK 201
>gi|88858891|ref|ZP_01133532.1| oligoribonuclease [Pseudoalteromonas tunicata D2]
gi|88819117|gb|EAR28931.1| oligoribonuclease [Pseudoalteromonas tunicata D2]
Length = 181
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + D+ILEIA I+TD L EGP + +HQ+ E LD M EWC H
Sbjct: 8 LIWLDLEMTGLEPKTDKILEIATIVTDCDLNILAEGPVIAVHQSDELLDGMDEWCVKQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S TE++A +Q + F++K V + GNS+ D FL YMP+L F
Sbjct: 68 GSGLTARCRQSSFTEQDAIEQTISFLEKWVPKGKSPMCGNSIGQDRRFLNAYMPELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +D+S+IK L RW P + K+ H AL+DI ESI EL+ Y+++ FK
Sbjct: 128 HYRNLDISTIKELARRWKPEVLNSI-KKKGVHLALEDIHESIAELRVYRQDFFK 180
>gi|121604376|ref|YP_981705.1| oligoribonuclease [Polaromonas naphthalenivorans CJ2]
gi|120593345|gb|ABM36784.1| Exonuclease, RNase T and DNA polymerase III [Polaromonas
naphthalenivorans CJ2]
Length = 187
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL E +RI+EIA ++T +LT +EGP L IHQ+ E LD M +W + H
Sbjct: 15 LVWLDCEMTGLDPEKERIIEIAVVVTGPQLTPRIEGPVLAIHQSDELLDQMDKWNKGTHG 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S +TE +A+ Q++ F+ + V T + GN++ D FL KYMP L F
Sbjct: 75 RSGLIDKVKASTVTEEDAQAQLLAFLARYVPKGTTPMCGNTIGQDRRFLAKYMPKLELFF 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+ K L RW P Y K QKH AL D+ ESI EL++Y+E+ K
Sbjct: 135 HYRNVDVSTFKELAKRWRPEVYSAF-KKHQKHTALADVHESIDELEHYREHFLK 187
>gi|421888867|ref|ZP_16319943.1| oligoribonuclease [Ralstonia solanacearum K60-1]
gi|378965809|emb|CCF96691.1| oligoribonuclease [Ralstonia solanacearum K60-1]
Length = 219
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 120/218 (55%), Gaps = 21/218 (9%)
Query: 27 SSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVD 86
S ++SSS V +K A S +NL VW+D+EMTGL E D
Sbjct: 6 SQPGAASSSAAHVTNKIAAKSDNNL--------------------VWLDMEMTGLSPEND 45
Query: 87 RILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTER 146
RI+E+A ++TD +L EGP LVIHQ E LD M W + H SGL KV S TE
Sbjct: 46 RIIEVAMVVTDSELNVLAEGPVLVIHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEA 105
Query: 147 EAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMR 206
+AE +++F+KK V + GNS+ D F+ +YMP L + F + +DVS++K LC R
Sbjct: 106 QAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYFHYRNLDVSTLKELCKR 165
Query: 207 WYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
W P + K Q+H A DI ESI EL+YY+++ +
Sbjct: 166 WQPAIAKGF-IKRQQHTAYADIIESIEELRYYRQHFIR 202
>gi|339326711|ref|YP_004686404.1| oligoribonuclease Orn [Cupriavidus necator N-1]
gi|338166868|gb|AEI77923.1| oligoribonuclease Orn [Cupriavidus necator N-1]
Length = 213
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL+ + DRI+EIA ++TD +L EGP LVIHQ+ LD M W + H
Sbjct: 16 LIWLDMEMTGLQPDTDRIIEIAIVVTDSELNILAEGPVLVIHQSDAVLDGMDNWNKGTHG 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE +++ F+K+ V + GNS+ D F+ +YMP L + F
Sbjct: 76 RSGLIDKVKASTLTEEQAEAELLAFLKRWVPANKSPMCGNSICQDRRFMARYMPKLEAFF 135
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P ++ K Q H AL DI ES+ EL+YY+ + +
Sbjct: 136 HYRNLDVSTLKELCKRWEPAIHKGF-IKRQLHTALADILESVEELRYYRTHFIR 188
>gi|197287169|ref|YP_002153041.1| oligoribonuclease [Proteus mirabilis HI4320]
gi|425074069|ref|ZP_18477174.1| oligoribonuclease [Proteus mirabilis WGLW4]
gi|194684656|emb|CAR46589.1| oligoribonuclease [Proteus mirabilis HI4320]
gi|404594309|gb|EKA94896.1| oligoribonuclease [Proteus mirabilis WGLW4]
Length = 181
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L EGP + +HQ+ + L SM EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDPQLNILAEGPVIAVHQSDKLLASMDEWNTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + A++ +EF++K V + GNSV D FL +YMP+L F
Sbjct: 68 ASGLVQRVKESQYDDAAAQQATIEFLEKWVPQGASPICGNSVGQDRRFLFRYMPELEKYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRESI EL YY++ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILEGF-KKKNTHQALDDIRESIAELAYYRQTFIK 180
>gi|300957822|ref|ZP_07170001.1| exonuclease [Escherichia coli MS 175-1]
gi|300315482|gb|EFJ65266.1| exonuclease [Escherichia coli MS 175-1]
Length = 199
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 26 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 86 SSGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|113868667|ref|YP_727156.1| oligoribonuclease [Ralstonia eutropha H16]
gi|113527443|emb|CAJ93788.1| Oligoribonuclease (3'->5' exoribonuclease) [Ralstonia eutropha H16]
Length = 208
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL+ + DRI+EIA ++TD +L EGP LVIHQ+ LD M W + H
Sbjct: 16 LIWLDMEMTGLQPDTDRIIEIAIVVTDSELNILAEGPVLVIHQSDAVLDGMDNWNKGTHG 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE +++ F+K+ V + GNS+ D F+ +YMP L + F
Sbjct: 76 RSGLIDKVKASTLTEEQAEAELLAFLKRWVPASKSPMCGNSICQDRRFMARYMPKLEAFF 135
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P ++ K Q H AL DI ES+ EL+YY+ + +
Sbjct: 136 HYRNLDVSTLKELCKRWEPAIHKGF-IKRQLHTALADILESVEELRYYRTHFIR 188
>gi|354614416|ref|ZP_09032282.1| Oligoribonuclease [Saccharomonospora paurometabolica YIM 90007]
gi|353221243|gb|EHB85615.1| Oligoribonuclease [Saccharomonospora paurometabolica YIM 90007]
Length = 202
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L +G DLVIH + L +M + + H
Sbjct: 5 LVWIDCEMTGLDLAKDALIEIAVLVTDAELNVLGDGVDLVIHADDDALANMPDVVRTMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE+Q ++++++ V T LAGNS+ D FL + MP L +
Sbjct: 65 RSGLTEEVRASTMTVAEAERQALDYIRRYVPDPRTAPLAGNSIATDRGFLARDMPTLDAH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRES+ EL+YY+ F
Sbjct: 125 LHYRMVDVSSVKELVRRWYPRIYYAKPEKGLAHRALADIRESLRELEYYRRTAF 178
>gi|389743865|gb|EIM85049.1| ribonuclease H-like protein [Stereum hirsutum FP-91666 SS1]
Length = 207
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 110/179 (61%), Gaps = 7/179 (3%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL + D ILEIA +IT+G+L +G + VI + + +D+M EWC H
Sbjct: 18 PLVWIDCEMTGLDYQTDTILEIAVLITNGELDIVDDGVEFVIKKDRAVMDNMNEWCIKQH 77
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGLT+K L S T V+ ++K + +LAGNSV+ D FL + MP+L
Sbjct: 78 GFSGLTEKCLASPFTLDVVRDSVLHYIKSWIPDQRVGVLAGNSVHADRAFLAREMPELVD 137
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVP----SKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYP + +P ++ HRALDDI+ SI ELK+YKEN+F
Sbjct: 138 WLHYRIVDVSSIKELHRRWYPTKF--IPQEQWGEQSSHRALDDIKASIRELKWYKENLF 194
>gi|383830770|ref|ZP_09985859.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
xinjiangensis XJ-54]
gi|383463423|gb|EID55513.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
xinjiangensis XJ-54]
Length = 202
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L EG DLVIH E L +M + + H
Sbjct: 5 LVWIDCEMTGLDLAKDALIEIAVLVTDAELNVLGEGIDLVIHADDEALANMPDVVREMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE+ +++++++V T LAGNS+ D FL + MP L +
Sbjct: 65 RSGLTEEVRRSAMTLDEAERLALDYIREHVPDPRTAPLAGNSIATDRGFLARDMPALDAH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DI+ESI ELKYY+ F
Sbjct: 125 LHYRMVDVSSVKELVRRWYPRIYYAKPEKGLAHRALADIKESIGELKYYRRTAF 178
>gi|365092215|ref|ZP_09329363.1| oligoribonuclease [Acidovorax sp. NO-1]
gi|363415339|gb|EHL22466.1| oligoribonuclease [Acidovorax sp. NO-1]
Length = 192
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL+ + DR+LEIA I+T L +EGP IHQ+ E L M W + H
Sbjct: 19 LVWLDCEMTGLEPDTDRLLEIAVIVTGPSLEPRIEGPVFAIHQSDELLGKMDAWNKGTHG 78
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S +TE EAE+Q++ F+ K V T + GNS+ D FL +YMP L F
Sbjct: 79 RSGLIDKVKASTVTEEEAEQQIIAFLSKYVPKGTAPMCGNSIGQDRRFLVRYMPKLERFF 138
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P Y K QKH AL D+ ESI EL +Y++++
Sbjct: 139 HYRNVDVSTLKELAKRWKPEAYTSF-KKAQKHTALADVHESIDELAHYRKHLL 190
>gi|262401567|ref|ZP_06078134.1| oligoribonuclease [Vibrio sp. RC586]
gi|262352282|gb|EEZ01411.1| oligoribonuclease [Vibrio sp. RC586]
Length = 181
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S ++E +A Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 ASGLVARVRASQVSEEQAIDQTLAFLKQWVPERKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P ++ SK H ALDDIRESI EL++Y++ +FK
Sbjct: 128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180
>gi|429098084|ref|ZP_19160190.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter dublinensis 582]
gi|426284424|emb|CCJ86303.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter dublinensis 582]
Length = 181
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP + +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPRQDRIIEIATLVTDADLNILAEGPVIAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S + E EAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVDRVKASTMGEHEAELATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEVLDGL-KKQNTHQALDDIRESVAELAYYREHFIK 180
>gi|378581311|ref|ZP_09829959.1| oligoribonuclease [Pantoea stewartii subsp. stewartii DC283]
gi|377816046|gb|EHT99153.1| oligoribonuclease [Pantoea stewartii subsp. stewartii DC283]
Length = 182
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 9 LIWIDLEMTGLDPERDRIIEIATLVTDADLNILAEGPVMAVHQSDEQLSLMDDWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +R AEK +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 NSGLVARVKASQTDDRAAEKATIEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K H+ALDDIRES+ EL YY+++ +
Sbjct: 129 HYRYLDVSTLKELARRWKP-DILPGFKKTGSHQALDDIRESVAELAYYRQHFLQ 181
>gi|395325136|gb|EJF57563.1| oligoribonuclease [Dichomitus squalens LYAD-421 SS1]
Length = 216
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 19/199 (9%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
PL+F PLVWID EMTGL DRILEIA +IT+G L +G +I KE L++M
Sbjct: 5 PLDFAAG-PLVWIDCEMTGLNPRKDRILEIAVLITNGNLETVDQGISYIIKTDKELLENM 63
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLK 180
GEWC++ H ASGLT+ ++S ++ ++V+ ++KK + +LAGNSV++D FL
Sbjct: 64 GEWCRDTHGASGLTQACINSPHSKDFVRQEVLNYIKKWIPNNRVGVLAGNSVHMDRAFLV 123
Query: 181 KYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKH----------------RA 224
+ MP++ + +VDVSSIK L RWY +VP KE H RA
Sbjct: 124 EEMPEIVDWLHYRIVDVSSIKELARRWYRTSKTQVP-KEPAHRRAFSSSSTSSSSFFRRA 182
Query: 225 LDDIRESIMELKYYKENIF 243
LDDI+ SI ELK+Y+EN+F
Sbjct: 183 LDDIQGSIRELKWYRENLF 201
>gi|390952260|ref|YP_006416019.1| oligoribonuclease [Thiocystis violascens DSM 198]
gi|390428829|gb|AFL75894.1| oligoribonuclease (3'->5' exoribonuclease) [Thiocystis violascens
DSM 198]
Length = 182
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL DRILEIA I+TD +L EGP + IHQT + L M +W + HH
Sbjct: 8 LIWLDLEMTGLDPFQDRILEIATIVTDTQLRILAEGPVMAIHQTDDILGGMDDWNREHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S ++E EAE ++F+ V L GNS+ D FL ++MP L +
Sbjct: 68 ASGLLERVRASRVSETEAESATLDFLADFVPAGASPLCGNSICQDRRFLARWMPKLDAYC 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L +RW P + KE KH ALDDIRESI EL++Y+E++ +
Sbjct: 128 HYRNLDVSTLKILALRWAP-EVASSFKKESKHLALDDIRESIAELRHYREHLLR 180
>gi|410628667|ref|ZP_11339385.1| oligoribonuclease [Glaciecola mesophila KMM 241]
gi|410151671|dbj|GAC26154.1| oligoribonuclease [Glaciecola mesophila KMM 241]
Length = 181
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL EVD +LEIA I+TD L EGP L IHQ+ + L++M +WC + H
Sbjct: 8 LVWIDMEMTGLHPEVDVVLEIATIVTDANLNILAEGPVLAIHQSDDVLNNMNQWCIDTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++ S + E+ A + + F++K V L GN++ D F+ KYMP+L F
Sbjct: 68 KSGLTERCRKSTVDEQTAVAETIRFLEKYVPKGASPLCGNTIGQDRRFMVKYMPELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SK+ H ALDDIRESI EL +Y+++IF
Sbjct: 128 HYRNIDVSTLKELVKRWKPEVLEGF-SKKGVHLALDDIRESIAELVFYRQHIF 179
>gi|374607618|ref|ZP_09680419.1| Exonuclease RNase T and DNA polymerase III [Mycobacterium tusciae
JS617]
gi|373555454|gb|EHP82024.1| Exonuclease RNase T and DNA polymerase III [Mycobacterium tusciae
JS617]
Length = 215
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + DR++EIA ++TD L EG D+VIH E L SM + ++ H
Sbjct: 5 LVWIDCEMTGLDLRKDRLIEIAVLVTDADLNILGEGLDVVIHADDEALSSMVDVVKDMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE+ V+++++ +V T LAGNS+ D F+ + M L
Sbjct: 65 RSGLTEEVRASTVDVATAEQLVLDYIRTHVKQAKTAPLAGNSIATDRGFIARDMAKLDEF 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI ELKYY++ F T
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRQTAFVT 180
>gi|336450840|ref|ZP_08621286.1| oligoribonuclease (3'->5' exoribonuclease) [Idiomarina sp. A28L]
gi|336282096|gb|EGN75334.1| oligoribonuclease (3'->5' exoribonuclease) [Idiomarina sp. A28L]
Length = 185
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 107/180 (59%), Gaps = 5/180 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E D I+EIA I+TD +L EGP +HQ+ E + SM EW H
Sbjct: 8 LIWIDLEMTGLSPENDVIIEIATIVTDDELNVIAEGPVFAVHQSDERMSSMDEWNTRTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+V S E +AE +EF++++V + GNS+ D FL +YMP L + F
Sbjct: 68 ESGLVKRVKESAYREADAEAATIEFLQQHVAAGVSPMCGNSIGQDRRFLARYMPTLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVP--SKEQKHRALDDIRESIMELKYYKENIFKTNLK 248
+ +DVS++K L RW P +P +K KH AL DI ESI EL+YY+E+ F K
Sbjct: 128 HYRNLDVSTVKELAKRWKP---EILPGFNKHNKHEALADIIESIEELRYYREHFFTEQTK 184
>gi|417710388|ref|ZP_12359398.1| exonuclease family protein [Shigella flexneri K-272]
gi|417720272|ref|ZP_12369145.1| exonuclease family protein [Shigella flexneri K-227]
gi|417830793|ref|ZP_12477328.1| oligoribonuclease monomer [Shigella flexneri J1713]
gi|420323392|ref|ZP_14825207.1| oligoribonuclease [Shigella flexneri 2850-71]
gi|333011146|gb|EGK30560.1| exonuclease family protein [Shigella flexneri K-272]
gi|333012659|gb|EGK32039.1| exonuclease family protein [Shigella flexneri K-227]
gi|335572734|gb|EGM59105.1| oligoribonuclease monomer [Shigella flexneri J1713]
gi|391243637|gb|EIQ02929.1| oligoribonuclease [Shigella flexneri 2850-71]
Length = 181
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDTNLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEVYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|378765472|ref|YP_005193931.1| oligoribonuclease [Pantoea ananatis LMG 5342]
gi|386077723|ref|YP_005991248.1| oligoribonuclease Orn [Pantoea ananatis PA13]
gi|354986904|gb|AER31028.1| oligoribonuclease Orn [Pantoea ananatis PA13]
gi|365184944|emb|CCF07894.1| oligoribonuclease [Pantoea ananatis LMG 5342]
Length = 182
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP + +HQ+ L M EW H
Sbjct: 9 LIWIDLEMTGLDPERDRIIEIATIVTDADLNILAEGPVMAVHQSDAQLALMDEWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AEK +EF+++ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 NSGLVERVKASKIDDRAAEKATIEFLQQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K H+ALDDIRES+ EL YY+++ +
Sbjct: 129 HYRYLDVSTLKELARRWKP-DILPGFKKSGSHQALDDIRESVAELAYYRQHFLQ 181
>gi|119897809|ref|YP_933022.1| oligoribonuclease [Azoarcus sp. BH72]
gi|166215750|sp|A1K5N0.1|ORN_AZOSB RecName: Full=Oligoribonuclease
gi|119670222|emb|CAL94135.1| oligoribonuclease [Azoarcus sp. BH72]
Length = 182
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL+ + DRI+EIA +ITD +L E P + +HQ + LD+M +W +N H
Sbjct: 8 LIWLDMEMTGLEPDRDRIIEIALVITDSQLNTIAEAPVIAVHQPESVLDAMDDWNKNTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E EAE +++ F+++ V T + GNS+ D FL +YMP + F
Sbjct: 68 KSGLIDRVRASTVSEAEAEARMLAFLQEWVPARTSPMCGNSICQDRRFLARYMPAFEAWF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P Y+ V K+ KH AL DI ESI EL++Y++N +
Sbjct: 128 HYRNLDVSTLKELAKRWRPEVYKGV-DKKGKHEALADIHESIGELRHYRDNFLR 180
>gi|118602163|ref|YP_903378.1| oligoribonuclease [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|166216583|sp|A1AVF0.1|ORN_RUTMC RecName: Full=Oligoribonuclease
gi|118567102|gb|ABL01907.1| Exonuclease, RNase T and DNA polymerase III [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 180
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 113/176 (64%), Gaps = 2/176 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E D I+EIA I+T+ +L +GP LVIHQ E L +M +W
Sbjct: 4 KTNLIWIDLEMTGLIPEKDVIIEIATIVTNVQLHIIAQGPSLVIHQNDEILSNMDQWNTE 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
HH +SGL ++V S L+ ++AE Q +EF+KK V T + GN++ D FL YMP L
Sbjct: 64 HHTSSGLLRRVRESSLSCKQAEAQTLEFLKKYVHTGASPMCGNTICQDRRFLYNYMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K L +RW P + + + K+ H AL DI++SI ELK+Y+ N+F
Sbjct: 124 RFFHYRHIDVSTLKELVIRWKP-NAKMIFEKDSAHLALSDIQDSIDELKHYR-NVF 177
>gi|73540610|ref|YP_295130.1| oligoribonuclease [Ralstonia eutropha JMP134]
gi|72118023|gb|AAZ60286.1| Exonuclease [Ralstonia eutropha JMP134]
Length = 210
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL + DRI+E+A ++TD +L EGP LVIHQ+ LD M W + H
Sbjct: 16 LVWLDMEMTGLSPDSDRIIEVAVVVTDSELNILAEGPVLVIHQSDAVLDGMDNWNKGTHG 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE +++ F+K+ V + GNS+ D F+ +YMP L + F
Sbjct: 76 RSGLIDKVKASTLTEEQAEAELLAFLKRWVPASKSPMCGNSICQDRRFMARYMPKLEAFF 135
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P ++ K Q H AL DI ES+ EL+YY+ + +
Sbjct: 136 HYRNLDVSTLKELCKRWEPAIHKGF-VKRQLHTALADILESVEELRYYRTHFIR 188
>gi|326331153|ref|ZP_08197449.1| oligoribonuclease [Nocardioidaceae bacterium Broad-1]
gi|325951048|gb|EGD43092.1| oligoribonuclease [Nocardioidaceae bacterium Broad-1]
Length = 222
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 111/174 (63%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL +E D ++E+A ++TD L +G D++I E L+ M ++ ++ H
Sbjct: 12 LVWIDCEMTGLSLENDALIEVAALVTDFDLNVLGDGVDIIIKPPAEALEQMDDFVRDMHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYT-PLLAGNSVYVDFMFLKKYMPDLASL 189
SGL + L +G+T REAE+QV+ +V ++ G + P L GN+V D FL + MP+L
Sbjct: 72 KSGLLVE-LENGVTMREAEEQVLAYVWEHCGKDSRPPLGGNTVATDRNFLARDMPELEGF 130
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSSIK L RW+PR Y P K HRAL DI+ESI EL+YY+E +F
Sbjct: 131 LHYRNVDVSSIKELSRRWFPRAYFSAPPKRGNHRALADIQESIEELRYYREAVF 184
>gi|399989003|ref|YP_006569353.1| oligoribonuclease [Mycobacterium smegmatis str. MC2 155]
gi|399233565|gb|AFP41058.1| Oligoribonuclease [Mycobacterium smegmatis str. MC2 155]
Length = 209
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ DR++EIA ++TD L +G D+VIH E L SM + + H
Sbjct: 5 LVWIDCEMTGLDLKSDRLIEIAVLVTDADLNILGDGLDVVIHADDESLSSMVDVVKQMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L
Sbjct: 65 RSGLTEEVRRSTVDLATAEEMVLDYIRGHVKQAKTAPLAGNSIATDRGFIARDMPKLDDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI ELKYY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRATAF 178
>gi|191173402|ref|ZP_03034931.1| oligoribonuclease [Escherichia coli F11]
gi|190906378|gb|EDV65988.1| oligoribonuclease [Escherichia coli F11]
Length = 181
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A GL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ACGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|393775536|ref|ZP_10363849.1| oligoribonuclease [Ralstonia sp. PBA]
gi|392717586|gb|EIZ05147.1| oligoribonuclease [Ralstonia sp. PBA]
Length = 213
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+E+A +ITD +L EGP LV+HQ E LD M W + H
Sbjct: 24 LIWLDMEMTGLSPDTDRIIEVAVVITDSELNVLAEGPVLVVHQADEVLDGMDAWNKGTHG 83
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE+ ++ F++K V T + GNS+ D F+ ++MP L + F
Sbjct: 84 RSGLIDKVKASTLTEAQAEETLLAFLRKWVPTGKSPMCGNSICQDRRFMARHMPKLEAFF 143
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K LC RW P ++ K Q H A+ DI ESI EL+YY+ +
Sbjct: 144 HYRNLDVSTLKELCKRWEPLIHKGF-HKRQLHTAMADIMESIEELRYYRTHFI 195
>gi|389839476|ref|YP_006341560.1| oligoribonuclease [Cronobacter sakazakii ES15]
gi|429118426|ref|ZP_19179190.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 680]
gi|387849952|gb|AFJ98049.1| oligoribonuclease [Cronobacter sakazakii ES15]
gi|426327103|emb|CCK09927.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 680]
Length = 181
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPRQDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVDRVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEVLDGL-KKQNTHQALDDIRESVAELAYYREHFIK 180
>gi|91794560|ref|YP_564211.1| oligoribonuclease [Shewanella denitrificans OS217]
gi|123165774|sp|Q12J88.1|ORN_SHEDO RecName: Full=Oligoribonuclease
gi|91716562|gb|ABE56488.1| Exonuclease [Shewanella denitrificans OS217]
Length = 181
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ EVD ++EIA ++TD +L +GP + IHQ+ E L M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPEVDVVIEIATLVTDSELNILAQGPVIAIHQSDETLAKMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S TE +A +Q ++F+ + V + GNS+ D FL KYM +L F
Sbjct: 68 QSGLIDRVKASQFTEADAIEQTIKFLAQYVPKGASPMCGNSIGQDRRFLNKYMLELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+IK L RW P + +K+ H+AL DI+ESI EL++Y++ +FK
Sbjct: 128 HYRNVDVSTIKELVKRWSPETMKGF-TKQGTHQALQDIQESIAELQFYRKEVFK 180
>gi|109899782|ref|YP_663037.1| oligoribonuclease [Pseudoalteromonas atlantica T6c]
gi|122971629|sp|Q15Q55.1|ORN_PSEA6 RecName: Full=Oligoribonuclease
gi|109702063|gb|ABG41983.1| Exonuclease, RNase T and DNA polymerase III [Pseudoalteromonas
atlantica T6c]
Length = 181
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL EVD +LEIA I+TD L EGP L IHQ+ + L++M +WC + H
Sbjct: 8 LVWIDMEMTGLHPEVDVVLEIATIVTDANLNILAEGPVLAIHQSDDVLNNMNQWCIDTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++ S + E+ A + + F++K V L GN++ D F+ KYMP+L F
Sbjct: 68 KSGLTERSRKSTVDEQTAVAETIRFLEKYVPKGASPLCGNTIGQDRRFMVKYMPELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SK+ H ALDDIRESI EL +Y+++IF
Sbjct: 128 HYRNIDVSTLKELVKRWKPEVLEGF-SKKGVHLALDDIRESIAELVFYRQHIF 179
>gi|227357138|ref|ZP_03841507.1| exoribonuclease II [Proteus mirabilis ATCC 29906]
gi|227162670|gb|EEI47637.1| exoribonuclease II [Proteus mirabilis ATCC 29906]
Length = 192
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L EGP + +HQ+ + L SM EW H
Sbjct: 19 LIWIDLEMTGLDPERDRIIEIATIVTDPQLNILAEGPVIAVHQSDKLLASMDEWNTTTHT 78
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + A++ +EF++K V + GNSV D FL +YMP+L F
Sbjct: 79 ASGLVQRVKESQYDDAAAQQATIEFLEKWVPQGASPICGNSVGQDRRFLFRYMPELEKYF 138
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K H+ALDDIRESI EL YY++ K
Sbjct: 139 HYRYLDVSTLKELARRWKPEILEGF-KKNNTHQALDDIRESIAELAYYRQTFIK 191
>gi|344170700|emb|CCA83126.1| oligoribonuclease [blood disease bacterium R229]
Length = 219
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E DRI+E+A ++TD +L EGP LVIHQ E LD M W + H
Sbjct: 30 LVWLDMEMTGLSPESDRIIEVAVVVTDSELNVLAEGPVLVIHQPDEILDGMDAWNKGTHG 89
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S TE +AE +++F+KK V + GNS+ D F+ +YMP L + F
Sbjct: 90 RSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYF 149
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P + K Q+H A DI ESI EL+YY+++ +
Sbjct: 150 HYRNLDVSTLKELCKRWQPAVAKGF-IKRQQHTAYADIIESIEELRYYRQHFIR 202
>gi|307730586|ref|YP_003907810.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1003]
gi|307585121|gb|ADN58519.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1003]
Length = 203
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
Query: 57 QNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
+++Q P M LVW+D+EMTGL + DRI+EIA ++T+ L + VEGP L IHQ+ E
Sbjct: 6 ESAQQPPLVRSDMNLVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDE 65
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDF 176
L M +W QN H SGL +V S ++E +A + +F+ V + GNS+ D
Sbjct: 66 TLARMDQWNQNTHGRSGLIDRVKASTVSEADATVLIRDFLGAYVPPGKSPMCGNSICQDR 125
Query: 177 MFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELK 236
F+ ++MP+L + F + +DVS++K LC RW P Y+ K H AL DI ESI ELK
Sbjct: 126 RFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELK 184
Query: 237 YYKENIF 243
YY+E+
Sbjct: 185 YYREHFL 191
>gi|410617082|ref|ZP_11328058.1| oligoribonuclease [Glaciecola polaris LMG 21857]
gi|410163351|dbj|GAC32196.1| oligoribonuclease [Glaciecola polaris LMG 21857]
Length = 181
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL EVD +LEIA I+TD L EGP L IHQ+ + L +M +WC + H
Sbjct: 8 LVWIDLEMTGLHPEVDVVLEIATIVTDANLNILAEGPVLAIHQSDDVLHNMNQWCIDTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++ S + E+ A + + F++K V L GN++ D F+ KYMP+L F
Sbjct: 68 QSGLTERCQKSTINEQTAVAETIRFLEKYVPKGASPLCGNTIGQDRRFMVKYMPELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P +K+ H ALDDIRESI EL +Y+++IF
Sbjct: 128 HYRNIDVSTLKELVKRWKPEVLEGF-TKKGVHLALDDIRESIAELVFYRQHIF 179
>gi|407938069|ref|YP_006853710.1| oligoribonuclease [Acidovorax sp. KKS102]
gi|407895863|gb|AFU45072.1| oligoribonuclease [Acidovorax sp. KKS102]
Length = 200
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 107/178 (60%), Gaps = 1/178 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL+ + DR+LEIA ++T L VEGP IHQ+ E L+ M W + H
Sbjct: 22 LVWLDCEMTGLEPDTDRLLEIAVVVTGPSLEPRVEGPVFAIHQSDELLNKMDAWNKGTHG 81
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S +TE EAE++++ F+ + V T + GNS+ D FL +YMP L F
Sbjct: 82 RSGLIDKVKASTVTEEEAEQKILAFLAQYVPKGTAPMCGNSIGQDRRFLVRYMPKLEKFF 141
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLK 248
+ VDVS++K L RW P Y K QKH AL D+ ESI EL +Y++++ +K
Sbjct: 142 HYRNVDVSTLKELAKRWKPEAYTSF-KKAQKHTALADVHESIDELAHYRQHLLAVEVK 198
>gi|383822356|ref|ZP_09977584.1| oligoribonuclease [Mycobacterium phlei RIVM601174]
gi|383331916|gb|EID10411.1| oligoribonuclease [Mycobacterium phlei RIVM601174]
Length = 218
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ DR++EIA ++TD L +G D+VIH +E L SM ++ H
Sbjct: 8 LVWIDCEMTGLDLKSDRLIEIAVLVTDADLNILGDGIDVVIHADEEALSSMIPVVKDMHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL +V S +T EAE+ V+ +++ +V T LAGNS+ D F+ + MP L
Sbjct: 68 RSGLIDEVRASTVTVAEAEEMVLSYIRDHVKQAKTAPLAGNSIATDRGFIARDMPKLDDY 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 128 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELQYYRRTAF 181
>gi|358445506|ref|ZP_09156107.1| oligoribonuclease [Corynebacterium casei UCMA 3821]
gi|356608540|emb|CCE54366.1| oligoribonuclease [Corynebacterium casei UCMA 3821]
Length = 212
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 112/177 (63%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + I+EIA IITD L EG D+V+H T++ L M ++ N H
Sbjct: 13 LVWIDLEMTGLDPKRHVIVEIAAIITDADLNIVGEGLDIVVHATEKELAEMDDFVTNMHN 72
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
+SGLT+++ + + +AE V+ ++++ P LAGNS+ D F+++YMP L +
Sbjct: 73 SSGLTEEIKAATTSLADAESAVLSLIEEHCDPEHPAPLAGNSIATDRTFIREYMPRLDAA 132
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +VDVS+IK L RW+PR Y P K HRAL DI ESI EL YY+ ++F+++
Sbjct: 133 LHYRMVDVSTIKELARRWHPRAYFNQPEKGMAHRALADIVESIRELDYYRRSVFRSD 189
>gi|440481300|gb|ELQ61899.1| phosphoglucomutase [Magnaporthe oryzae P131]
Length = 761
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 3/182 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLT-KSVEGPDLVIHQTKECLDSMGEWCQNH 128
PLVWID EMTGL + + I+EI C++TDG L K EG V+HQT+E +D M EWC
Sbjct: 7 PLVWIDCEMTGLNPDSEEIIEIFCLVTDGDLNLKDEEGWGTVVHQTQERMDKMDEWCTKQ 66
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT +V+ S T EA ++ ++KK+V LLAG+SV+ D FL++ +
Sbjct: 67 HGGSGLTARVVGSTTTPEEAADGLLAYIKKHVPHAGVALLAGSSVHHDRAFLRRAPYNRV 126
Query: 188 SLFSHV-LVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ H ++DVSSIK RW P+ +KVP+K+ H A DDI ESI E KYY+E +F
Sbjct: 127 TDHLHYRILDVSSIKEAAKRWAPKVAKKVPNKKGTHLARDDILESIEEAKYYREGLFAKA 186
Query: 247 LK 248
L+
Sbjct: 187 LQ 188
>gi|217970407|ref|YP_002355641.1| oligoribonuclease [Thauera sp. MZ1T]
gi|217507734|gb|ACK54745.1| Exonuclease RNase T and DNA polymerase III [Thauera sp. MZ1T]
Length = 182
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL+ + DRI+EIA ++TD L E P + +HQ LD M EW +N H
Sbjct: 8 LIWLDMEMTGLEPDRDRIIEIAIVLTDEALEVIAEAPVIAVHQPDSVLDGMDEWNRNTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S ++E +AE QV+ F++ +V T + GNSV D FL ++MP+L + F
Sbjct: 68 KSGLTARVRASTMSEADAEAQVLAFLRAHVPARTSPMCGNSVCQDRRFLARWMPELEAWF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P Y V K H AL DI ESI EL++Y+++ + +
Sbjct: 128 HYRNLDVSTLKELARRWRPEIYAGV-KKAGSHTALADIHESIAELRHYRDHFLRLD 182
>gi|163856231|ref|YP_001630529.1| oligoribonuclease [Bordetella petrii DSM 12804]
gi|163259959|emb|CAP42260.1| oligoribonuclease [Bordetella petrii]
Length = 181
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL +RI+E+A ++T+ LT EGP LV+HQ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLDPTKERIIEVAVVVTEPDLTVVAEGPVLVVHQPDSLLDAMDNWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE+ ++EF+ ++V L GN++ D F+ YMP+L F
Sbjct: 68 KSGLIDKVRASTLTEAQAERMLLEFLAQHVPAGKSPLCGNTISQDRRFMYAYMPELERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ KH AL DI ESI ELKYY+E+ K
Sbjct: 128 HYRNLDVSTLKELARRWVPAVYKGF-EKKSKHEALADIYESIDELKYYREHFLKV 181
>gi|351731063|ref|ZP_08948754.1| oligoribonuclease [Acidovorax radicis N35]
Length = 192
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL+ + DR+LEIA I+T L +EGP IHQ E L+ M W + H
Sbjct: 19 LVWLDCEMTGLEPDTDRLLEIAVIVTGPSLEPRIEGPVFAIHQPDELLNKMDAWNKGTHG 78
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S +TE EAE+Q++ F+ + V T + GNS+ D FL +YMP L F
Sbjct: 79 RSGLIDKVKASTVTEEEAEQQIIAFLSQYVPKGTAPMCGNSIGQDRRFLVRYMPKLERFF 138
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P Y K QKH AL D+ ESI EL +Y++++
Sbjct: 139 HYRNVDVSTLKELAKRWKPEAYTSF-KKAQKHTALADVHESIEELAHYRKHLL 190
>gi|333982375|ref|YP_004511585.1| oligoribonuclease [Methylomonas methanica MC09]
gi|333806416|gb|AEF99085.1| Oligoribonuclease [Methylomonas methanica MC09]
Length = 181
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+EIA ++TD L EGP L +HQ+ L +M +W Q HH
Sbjct: 8 LIWIDLEMTGLDPDTDLIIEIATVVTDKNLNLLAEGPVLAVHQSDAALAAMDDWNQRHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++ AE +EF+ + + GNS+ D FL +YMP L + F
Sbjct: 68 QSGLIQRVKESNISAANAESLTLEFLANWLPPKASPICGNSICQDRRFLYRYMPKLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P+ + SK+ H+ALDDI ESI ELKYY+E+ FK
Sbjct: 128 HYRNLDVSTVKELAGRWAPQ-LKDGFSKKASHKALDDILESIEELKYYREHFFKV 181
>gi|424658235|ref|ZP_18095495.1| oligoribonuclease [Vibrio cholerae HE-16]
gi|408055678|gb|EKG90595.1| oligoribonuclease [Vibrio cholerae HE-16]
Length = 181
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+E+A I+TD +L EGP + I+Q + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIYQPESELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S + E EA +Q + F+K+ V + GNS+ D FL K+MP L + F
Sbjct: 68 ASGLVARVRQSQVREDEAIEQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P + K SK H ALDDIRESI EL++Y++++FK
Sbjct: 128 HYRYIDVSTIKELTRRWQP-EVLKAFSKTGSHLALDDIRESIAELQFYRKSVFK 180
>gi|422646550|ref|ZP_16709683.1| oligoribonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330960097|gb|EGH60357.1| oligoribonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 178
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L+ EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELSTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|114564478|ref|YP_751992.1| oligoribonuclease [Shewanella frigidimarina NCIMB 400]
gi|122298754|sp|Q07XW1.1|ORN_SHEFN RecName: Full=Oligoribonuclease
gi|114335771|gb|ABI73153.1| Exonuclease, RNase T and DNA polymerase III [Shewanella
frigidimarina NCIMB 400]
Length = 181
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ +VDR++EIA ++TD +L +GP L I+QT E L M +W Q HH
Sbjct: 8 LIWVDLEMTGLEPDVDRVIEIATLVTDQELNIIAQGPVLAIYQTDEVLAGMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +E++A Q ++F+ + V + GNS+ D FL KYM +L F
Sbjct: 68 ESGLVDRVRASKCSEQDAIAQTIDFLAQYVPKGASPMCGNSIGQDRRFLNKYMLELEEFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H+AL+DI+ESI E+++Y++ +FK
Sbjct: 128 HYRNIDVSTVKELVRRWSPETMNGF-SKKNTHQALEDIKESIAEMQFYRKEVFK 180
>gi|86739751|ref|YP_480151.1| oligoribonuclease [Frankia sp. CcI3]
gi|86566613|gb|ABD10422.1| Exonuclease [Frankia sp. CcI3]
Length = 250
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D +LE+AC++TD +L EG LVI +E L +M + HE
Sbjct: 16 LVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIGLVISAPEEALQTMEPVVREMHE 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
ASGLT V S L+ +AE+Q++++V+ + L GNS+ D FL +Y+P L +
Sbjct: 76 ASGLTAAVRASTLSLDDAERQLLDYVRTRIPEVRKAPLCGNSIATDRTFLARYLPSLDAH 135
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWY R Y P K HRAL DI+ESI EL+YY+ +F
Sbjct: 136 LHYRMIDVSSIKELARRWYVRAYYAAPVKRGGHRALADIQESIEELRYYRRAVF 189
>gi|441502758|ref|ZP_20984767.1| 3'-to-5' oligoribonuclease (orn) [Photobacterium sp. AK15]
gi|441429673|gb|ELR67126.1| 3'-to-5' oligoribonuclease (orn) [Photobacterium sp. AK15]
Length = 183
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+EIA I+TD +L EGP L IHQ + L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHQIIEIATIVTDAQLNILAEGPVLAIHQPEAELAKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + E EA +Q + F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 NSGLVERVRQSNIDEGEAVRQTIAFLEQWVPKGASPICGNSIGQDRRFLYKHMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +DVS++K L RW P +K+ H ALDDIR+SI EL+YY+E+IF L
Sbjct: 128 HYRYLDVSTLKELTRRWKPELLSGF-NKKGSHLALDDIRDSIAELRYYREHIFNIWL 183
>gi|334132014|ref|ZP_08505776.1| Pligoribonuclease [Methyloversatilis universalis FAM5]
gi|333443487|gb|EGK71452.1| Pligoribonuclease [Methyloversatilis universalis FAM5]
Length = 182
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL + DR++E+AC++T+ +L EGP LV+HQ+ E L+ M +W + H
Sbjct: 8 LVWLDMEMTGLDPDNDRVIELACVVTNAQLEVIAEGPVLVVHQSDEVLNGMDKWNTSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S L E AE Q++ F+ + V + + GNS+ D FL ++MP L + F
Sbjct: 68 KSGLTDRVRASTLDEAAAEAQMIAFLSQYVPERSSPICGNSICQDRRFLARHMPGLEAWF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P + K Q+H AL DI ESI ELK+Y+E+ +
Sbjct: 128 HYRNLDVSTLKELCRRWRPELSGQF-KKAQRHEALADIYESIDELKFYREHFLR 180
>gi|299771588|ref|YP_003733614.1| oligoribonuclease [Acinetobacter oleivorans DR1]
gi|298701676|gb|ADI92241.1| oligoribonuclease [Acinetobacter oleivorans DR1]
Length = 188
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 105/176 (59%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDHLNVLAEGPVLAVHQPDRILNAMDEWNTRQHG 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S LT +AE Q +EF+KK V + GNS+ D FL + MP+L F
Sbjct: 69 QSGLIERVRRSKLTALDAELQTLEFLKKWVNPKVSPMCGNSICQDRRFLHRLMPELEQYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSTVKELSKRWRPEIMSGL-KKNASHLAMDDIRDSISELKYYREYFFIMN 183
>gi|253991561|ref|YP_003042917.1| oligoribonuclease [Photorhabdus asymbiotica]
gi|211638439|emb|CAR67061.1| oligoribonuclease (ec 3.1.-.-) [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783011|emb|CAQ86176.1| oligoribonuclease [Photorhabdus asymbiotica]
Length = 181
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 106/175 (60%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP + IHQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILAEGPVIAIHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + AEK +EF++K V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASKIDAHGAEKATIEFLEKWVPVGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELTYYREHFIQS 181
>gi|256375198|ref|YP_003098858.1| oligoribonuclease [Actinosynnema mirum DSM 43827]
gi|255919501|gb|ACU35012.1| Exonuclease RNase T and DNA polymerase III [Actinosynnema mirum DSM
43827]
Length = 208
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L EG D+VIH E L +M E H
Sbjct: 4 LVWIDCEMTGLDLGSDALIEIAALVTDAELNVLGEGVDVVIHADDEALAAMPEVVVKMHA 63
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S T EAE V+ ++++ V T LAGNS+ D F+ + MP+L +
Sbjct: 64 KSGLTEEVRRSTTTLAEAEALVLAYIREWVPDARTAPLAGNSIATDRGFIARDMPELDAH 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P K HRAL DI ESI EL YY+ F
Sbjct: 124 LHYRMVDVSSIKELCRRWYPRIYFAQPGKGLAHRALADIEESIRELAYYRRTAF 177
>gi|424864455|ref|ZP_18288358.1| oligoribonuclease [SAR86 cluster bacterium SAR86B]
gi|400759201|gb|EJP73383.1| oligoribonuclease [SAR86 cluster bacterium SAR86B]
Length = 181
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K LVWIDLEMTGL E + I+EIA ++TD L EGP+LVI+Q LDSM EW +N
Sbjct: 7 KHNLVWIDLEMTGLDPENESIIEIATLVTDSNLNIVAEGPNLVINQPTALLDSMDEWNKN 66
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +SGL ++V S +T + AE + +EF+ K VG + GN+V D FL KYMP L
Sbjct: 67 QHGSSGLIEEVKSSIITMQMAEIETLEFISKYVGEKQSPMCGNTVSHDRRFLFKYMPRLE 126
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
+ F++ +DVSS K + RW + +V K+ HRAL DI+ES+ ELK+YK+
Sbjct: 127 AYFNYRHIDVSSFKEVATRWI--NDAQVYEKKGSHRALGDIKESVEELKFYKD 177
>gi|425070248|ref|ZP_18473362.1| oligoribonuclease [Proteus mirabilis WGLW6]
gi|404595514|gb|EKA96054.1| oligoribonuclease [Proteus mirabilis WGLW6]
Length = 181
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L EGP + +HQ+ + L SM EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDPQLNILAEGPVIAVHQSDKLLASMDEWNTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + A++ +EF++K V + GNSV D FL +YMP+L F
Sbjct: 68 ASGLVQRVKESQYDDVAAQQATIEFLEKWVPQGASPICGNSVGQDRRFLFRYMPELEKYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRESI EL YY++ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILEGF-KKKNTHQALDDIRESIAELAYYRQTFIK 180
>gi|300692079|ref|YP_003753074.1| oligoribonuclease [Ralstonia solanacearum PSI07]
gi|299079139|emb|CBJ51807.1| oligoribonuclease [Ralstonia solanacearum PSI07]
gi|344174075|emb|CCA85856.1| oligoribonuclease [Ralstonia syzygii R24]
Length = 219
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E DRI+E+A ++TD +L EGP LVIHQ E LD M W + H
Sbjct: 30 LVWLDMEMTGLSPENDRIIEVAVVVTDSELNVLAEGPVLVIHQPDEILDGMDAWNKGTHG 89
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S TE +AE +++F+KK V + GNS+ D F+ +YMP L + F
Sbjct: 90 RSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYF 149
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P + K Q+H A DI ESI EL+YY+++ +
Sbjct: 150 HYRNLDVSTLKELCKRWQPAVAKGF-IKRQQHTAYADIIESIEELRYYRQHFIR 202
>gi|17545661|ref|NP_519063.1| oligoribonuclease [Ralstonia solanacearum GMI1000]
gi|21263804|sp|Q8Y0V1.1|ORN_RALSO RecName: Full=Oligoribonuclease
gi|17427954|emb|CAD14644.1| probable oligoribonuclease protein [Ralstonia solanacearum GMI1000]
Length = 219
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E DRI+E+A ++TD +L EGP LVIHQ E LD M W + H
Sbjct: 30 LVWLDMEMTGLSPENDRIIEVAMVVTDSELNVLAEGPVLVIHQPDEILDGMDAWNKGTHG 89
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S TE +AE +++F+KK V + GNS+ D F+ +YMP L + F
Sbjct: 90 RSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYF 149
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P + K Q+H A DI ESI EL+YY+++ +
Sbjct: 150 HYRNLDVSTLKELCKRWQPAIAKGF-IKRQQHTAYADIVESIEELRYYRQHFIR 202
>gi|299066912|emb|CBJ38107.1| oligoribonuclease [Ralstonia solanacearum CMR15]
Length = 219
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E DRI+E+A ++TD +L EGP LVIHQ E LD M W + H
Sbjct: 30 LVWLDMEMTGLSPENDRIIEVAMVVTDSELNVLAEGPVLVIHQPDELLDGMDAWNKGTHG 89
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S TE +AE +++F+KK V + GNS+ D F+ +YMP L + F
Sbjct: 90 RSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYF 149
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P + K Q+H A DI ESI EL+YY+++ +
Sbjct: 150 HYRNLDVSTLKELCKRWQPAIAKGF-IKRQQHTAYADIVESIEELRYYRQHFIR 202
>gi|383825329|ref|ZP_09980479.1| oligoribonuclease [Mycobacterium xenopi RIVM700367]
gi|383335059|gb|EID13491.1| oligoribonuclease [Mycobacterium xenopi RIVM700367]
Length = 215
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG+L EG D+VIH L SM E + H
Sbjct: 5 LVWIDCEMTGLDLRSDKLIEIAALVTDGELNILGEGIDVVIHADDAALSSMIEVVTDMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL +V S + AE V++++++ V T LAGNSV D F+ + MP L S
Sbjct: 65 RSGLVDEVRASTIDVATAETMVLDYIREYVKQPKTAPLAGNSVATDRGFIARDMPALDSF 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVS+IK LC RWYPR Y P+K HRAL DI ESI ELK+Y+ F
Sbjct: 125 LHYRMIDVSTIKELCRRWYPRIYYGQPTKGLTHRALADIHESIRELKFYRRTAF 178
>gi|381151923|ref|ZP_09863792.1| oligoribonuclease (3'->5' exoribonuclease) [Methylomicrobium album
BG8]
gi|380883895|gb|EIC29772.1| oligoribonuclease (3'->5' exoribonuclease) [Methylomicrobium album
BG8]
Length = 188
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 108/177 (61%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + D I+EIA I+TD LT GP + +HQ L M EW Q HH
Sbjct: 8 LVWIDLEMTGLNPDQDVIIEIATIVTDKDLTILAHGPVIAVHQPDSILVEMDEWNQQHHS 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + EAE+Q +EF+++ + T + GN++ D FL +YMP L + F
Sbjct: 68 QSGLIDRVKASEIDTVEAERQTLEFLRQWLPDRTSPMCGNTIGQDRRFLFRYMPQLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 247
+ +DVS++K L RW P + + +K HRALDD++ESI EL+YY+E+ +
Sbjct: 128 HYRSIDVSTLKELAARWAP-EIKDGFTKVSAHRALDDVKESIDELQYYREHFIASRF 183
>gi|422652914|ref|ZP_16715690.1| oligoribonuclease [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330965973|gb|EGH66233.1| oligoribonuclease [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 178
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NWFHYRNLDVSTLKELAARWAPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|421748163|ref|ZP_16185797.1| oligoribonuclease [Cupriavidus necator HPC(L)]
gi|409773152|gb|EKN55003.1| oligoribonuclease [Cupriavidus necator HPC(L)]
Length = 221
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E DRI+E+A ++TD +L EGP LVIHQ LD+M W + H
Sbjct: 31 LVWLDMEMTGLSPENDRIIEVAVVVTDSELHILAEGPVLVIHQDDAVLDAMDNWNKGTHG 90
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE +++ F+K+ V + GNS+ D F+ +YMP L + F
Sbjct: 91 RSGLIDKVKASTLTEAQAEAELLAFLKRWVPAGKSPMCGNSICQDRRFMARYMPKLEAFF 150
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K LC RW P ++ K Q H AL DI ESI EL+YY+ + +++
Sbjct: 151 HYRNLDVSTLKELCKRWEPAIHKGF-IKRQLHTALADILESIEELRYYRTHFIRSS 205
>gi|227875987|ref|ZP_03994110.1| exoribonuclease II [Mobiluncus mulieris ATCC 35243]
gi|227843519|gb|EEJ53705.1| exoribonuclease II [Mobiluncus mulieris ATCC 35243]
Length = 205
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 110/178 (61%), Gaps = 4/178 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL + D ++EI I+TD L G DL+I ++ LD+MG++ + H
Sbjct: 9 LVWVDCEMTGLDLATDELIEIGVIVTDFNLNPLDTGIDLLIKPSQTALDNMGDFVREMHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL ++ H GL EA +QV+E+V++ V PL AGNSV D FLKK MPD
Sbjct: 69 KSGLLDELDH-GLPVTEAARQVLEYVQRFVPEAGKAPL-AGNSVGTDKTFLKKQMPDFVD 126
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +VDVSSIK L RW+P+ Y P K HRAL DI++SI EL+YY+ +F ++
Sbjct: 127 WLHYRIVDVSSIKELAARWFPKVYGIAPEKFGNHRALGDIQDSINELRYYRATLFPSD 184
>gi|119946941|ref|YP_944621.1| oligoribonuclease [Psychromonas ingrahamii 37]
gi|119865545|gb|ABM05022.1| Exonuclease, RNase T and DNA polymerase III [Psychromonas
ingrahamii 37]
Length = 179
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K LVWIDLEMTGL + D+I+EIA I+TD L +GP+ VIHQ+ + LD+M EWC
Sbjct: 3 KNNLVWIDLEMTGLNPDTDKIIEIATIVTDSDLNILAQGPEFVIHQSNQALDAMDEWCTT 62
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT +V S ++ AE+ ++F+K+ V L GNS+ D FL + MP L
Sbjct: 63 QHGKSGLTDRVKASQISCANAEQATLDFLKEWVPAGAAPLCGNSIGQDRRFLVRQMPALE 122
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS+IK L RW P + K H AL DI+ESI EL++Y+++ FK
Sbjct: 123 AYFHYRNIDVSTIKELGNRWAPEMVNQ-HKKTGAHTALQDIKESISELQHYQKHFFK 178
>gi|269977107|ref|ZP_06184081.1| oligoribonuclease [Mobiluncus mulieris 28-1]
gi|307700139|ref|ZP_07637185.1| oligoribonuclease [Mobiluncus mulieris FB024-16]
gi|269934938|gb|EEZ91498.1| oligoribonuclease [Mobiluncus mulieris 28-1]
gi|307614688|gb|EFN93911.1| oligoribonuclease [Mobiluncus mulieris FB024-16]
Length = 208
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 110/178 (61%), Gaps = 4/178 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL + D ++EI I+TD L G DL+I ++ LD+MG++ + H
Sbjct: 12 LVWVDCEMTGLDLATDELIEIGVIVTDFNLNPLDTGIDLLIKPSQTALDNMGDFVREMHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL ++ H GL EA +QV+E+V++ V PL AGNSV D FLKK MPD
Sbjct: 72 KSGLLDELDH-GLPVTEAARQVLEYVQRFVPEAGKAPL-AGNSVGTDKTFLKKQMPDFVD 129
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +VDVSSIK L RW+P+ Y P K HRAL DI++SI EL+YY+ +F ++
Sbjct: 130 WLHYRIVDVSSIKELAARWFPKVYGIAPEKFGNHRALGDIQDSINELRYYRATLFPSD 187
>gi|241763728|ref|ZP_04761776.1| Exonuclease RNase T and DNA polymerase III [Acidovorax delafieldii
2AN]
gi|241367033|gb|EER61418.1| Exonuclease RNase T and DNA polymerase III [Acidovorax delafieldii
2AN]
Length = 195
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 109/186 (58%), Gaps = 1/186 (0%)
Query: 58 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKEC 117
N P+ + LVW+D EMTGL+ + DR+LEIA ++T +L VEGP IHQ E
Sbjct: 9 NPAPPVLTKSDQNLVWLDCEMTGLEPDTDRLLEIAVVVTGPQLEPRVEGPVFAIHQADEL 68
Query: 118 LDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFM 177
LD M W + H SGL KV S +TE +AE+Q+++F+ + V T + GNS+ D
Sbjct: 69 LDRMDAWNKGTHGRSGLIDKVKASTITEAQAEQQILDFLAQYVPKGTAPMCGNSIGQDRR 128
Query: 178 FLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKY 237
FL +YMP L F + VDVS++K L RW P Y K QKH AL D+ ESI EL +
Sbjct: 129 FLVRYMPRLERFFHYRNVDVSTLKELAKRWKPEAYTSF-KKAQKHTALADVHESIDELAH 187
Query: 238 YKENIF 243
Y+ ++
Sbjct: 188 YRVHLL 193
>gi|71733293|ref|YP_272859.1| oligoribonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|422603930|ref|ZP_16675948.1| oligoribonuclease [Pseudomonas syringae pv. mori str. 301020]
gi|123638427|sp|Q48P10.1|ORN_PSE14 RecName: Full=Oligoribonuclease
gi|71553846|gb|AAZ33057.1| oligoribonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298160609|gb|EFI01631.1| Oligoribonuclease [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330886590|gb|EGH20251.1| oligoribonuclease [Pseudomonas syringae pv. mori str. 301020]
Length = 178
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NWFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|283786843|ref|YP_003366708.1| oligoribonuclease [Citrobacter rodentium ICC168]
gi|282950297|emb|CBG89944.1| oligoribonuclease [Citrobacter rodentium ICC168]
Length = 181
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATIEFLKAWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFIQ 180
>gi|298345320|ref|YP_003718007.1| exoribonuclease II [Mobiluncus curtisii ATCC 43063]
gi|304390877|ref|ZP_07372829.1| oligoribonuclease [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|298235381|gb|ADI66513.1| exoribonuclease II [Mobiluncus curtisii ATCC 43063]
gi|304325760|gb|EFL93006.1| oligoribonuclease [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 212
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 114/181 (62%), Gaps = 8/181 (4%)
Query: 66 EYKM------PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
EY+M P+VWID EMTGL + VD ++E+A I+TD +L G DL+I + ++
Sbjct: 4 EYRMGNKKTDPMVWIDCEMTGLDLHVDELIEVAVIVTDAELNPLDSGIDLLIKPSATAMN 63
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMF 178
MGE+ + H SGL K L +GL+ EA +QV+++VK+ V LAGNSV+ D F
Sbjct: 64 HMGEFVREMHTKSGLLAK-LDTGLSVEEAGRQVLDYVKRLVPEPGKAQLAGNSVHSDKAF 122
Query: 179 LKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYY 238
L K MP+L + + ++DVS++K L MRWYP+ Y P K HRAL DI +S+ EL+YY
Sbjct: 123 LAKQMPELINWLHYRIIDVSTLKELAMRWYPKVYGLAPEKTGNHRALGDIIDSLNELRYY 182
Query: 239 K 239
+
Sbjct: 183 R 183
>gi|186475543|ref|YP_001857013.1| oligoribonuclease [Burkholderia phymatum STM815]
gi|184192002|gb|ACC69967.1| Exonuclease RNase T and DNA polymerase III [Burkholderia phymatum
STM815]
Length = 207
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
M LVW+D+EMTGL + DRI+EIA ++T+ L K VEGP L IHQ+ E L M +W +N
Sbjct: 17 MNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDKMVEGPVLAIHQSDETLGKMDDWNKNT 76
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
H SGL +V S +TE +A +++ F+ ++V + GNS+ D F+ ++MP+L +
Sbjct: 77 HGRSGLIDRVRASTVTEADATERIRAFLGQHVPPGKSPMCGNSICQDRRFMARWMPELET 136
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K LC RW P Y+ K H AL DI ESI EL+YY+E+
Sbjct: 137 FFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELRYYREHFL 190
>gi|377576914|ref|ZP_09805897.1| oligoribonuclease [Escherichia hermannii NBRC 105704]
gi|377541442|dbj|GAB51062.1| oligoribonuclease [Escherichia hermannii NBRC 105704]
Length = 181
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +R AE +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASTQDDRAAELATLEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + KE H+ALDDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILVGL-KKEGSHQALDDIRESVAELAYYREHFIK 180
>gi|152981086|ref|YP_001352542.1| oligoribonuclease [Janthinobacterium sp. Marseille]
gi|151281163|gb|ABR89573.1| oligoribonuclease protein [Janthinobacterium sp. Marseille]
Length = 195
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 109/183 (59%), Gaps = 5/183 (2%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P EF LVW+D+EMTGL + DRI+E+A ++TD L EGP IHQ+ E LD M
Sbjct: 17 PNEFN----LVWVDMEMTGLDPDKDRIIEVAVVVTDANLNILGEGPVFAIHQSDEVLDGM 72
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
W + H SGL ++ S +TE EAE ++EF+KK V + + GN++ D F+ +
Sbjct: 73 DAWNKGTHGRSGLIDRIKASTVTEAEAETALIEFLKKYVPSGKSPMCGNTICQDRRFMVR 132
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
MP L + F + +DVS++K LC RW P K QKH AL DI ESI EL+YY+E+
Sbjct: 133 GMPKLEAFFHYRNLDVSTLKELCRRWKPELVNGF-KKHQKHTALADILESIEELRYYREH 191
Query: 242 IFK 244
K
Sbjct: 192 FIK 194
>gi|118473234|ref|YP_888984.1| oligoribonuclease [Mycobacterium smegmatis str. MC2 155]
gi|118174521|gb|ABK75417.1| oligoribonuclease [Mycobacterium smegmatis str. MC2 155]
Length = 216
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ DR++EIA ++TD L +G D+VIH E L SM + + H
Sbjct: 12 LVWIDCEMTGLDLKSDRLIEIAVLVTDADLNILGDGLDVVIHADDESLSSMVDVVKQMHA 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L
Sbjct: 72 RSGLTEEVRRSTVDLATAEEMVLDYIRGHVKQAKTAPLAGNSIATDRGFIARDMPKLDDY 131
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI ELKYY+ F
Sbjct: 132 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRATAF 185
>gi|375258556|ref|YP_005017726.1| oligoribonuclease [Klebsiella oxytoca KCTC 1686]
gi|397655505|ref|YP_006496207.1| 3'-to-5' oligoribonuclease [Klebsiella oxytoca E718]
gi|402843785|ref|ZP_10892174.1| oligoribonuclease [Klebsiella sp. OBRC7]
gi|421727355|ref|ZP_16166518.1| oligoribonuclease [Klebsiella oxytoca M5al]
gi|423106045|ref|ZP_17093746.1| oligoribonuclease [Klebsiella oxytoca 10-5242]
gi|423111900|ref|ZP_17099594.1| oligoribonuclease [Klebsiella oxytoca 10-5243]
gi|423117544|ref|ZP_17105235.1| oligoribonuclease [Klebsiella oxytoca 10-5245]
gi|365908034|gb|AEX03487.1| oligoribonuclease [Klebsiella oxytoca KCTC 1686]
gi|376375674|gb|EHS88460.1| oligoribonuclease [Klebsiella oxytoca 10-5245]
gi|376375998|gb|EHS88783.1| oligoribonuclease [Klebsiella oxytoca 10-5243]
gi|376379353|gb|EHS92107.1| oligoribonuclease [Klebsiella oxytoca 10-5242]
gi|394344205|gb|AFN30326.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella oxytoca E718]
gi|402276303|gb|EJU25418.1| oligoribonuclease [Klebsiella sp. OBRC7]
gi|410371916|gb|EKP26634.1| oligoribonuclease [Klebsiella oxytoca M5al]
Length = 181
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +REAE +EF+KK V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASTQGDREAELATIEFLKKWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|374704702|ref|ZP_09711572.1| oligoribonuclease [Pseudomonas sp. S9]
Length = 180
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E D I+E+A I+TD L EGP + +HQ+ E L M EW H
Sbjct: 7 LIWIDLEMTGLDPERDVIIEMATIVTDSDLKILAEGPVIAVHQSDEALAGMDEWNTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +++ EAE Q + F+++ V + GNS+ D FL +YMP L + F
Sbjct: 67 DSGLTQRVRESKISQAEAEAQTIAFLEQWVPKGKSPICGNSIGQDRRFLYRYMPALEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P+ ++ K+ H+ALDDIRESI EL+YY+E+ K
Sbjct: 127 HYRYLDVSTLKILADRWAPQ-IKEGFVKKGTHQALDDIRESIAELQYYREHFLKV 180
>gi|395761436|ref|ZP_10442105.1| oligoribonuclease [Janthinobacterium lividum PAMC 25724]
Length = 176
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
M LVW+D+EMTGL+ + DRI+E+A ++TD L EGP VIHQ+ E L+ M W +
Sbjct: 1 MNLVWVDMEMTGLEPDTDRIIEVAVVVTDMHLNLLAEGPVFVIHQSDETLNKMDAWNKGT 60
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
H SGL KV S +TE +AE +++ F+KK V + GN++ D F+ + MP L +
Sbjct: 61 HGRSGLIDKVKASTVTEAQAEAELIAFLKKYVPAGKSPMCGNTIGQDRRFMVRGMPKLEA 120
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
F + VDVS+ K LC RW P + K QKH AL DI ESI ELKYY+E+ K
Sbjct: 121 FFHYRNVDVSTFKELCKRWKP-EIATGFKKHQKHTALADILESIEELKYYREHFIK 175
>gi|257482419|ref|ZP_05636460.1| oligoribonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289623748|ref|ZP_06456702.1| oligoribonuclease [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|289648635|ref|ZP_06479978.1| oligoribonuclease [Pseudomonas syringae pv. aesculi str. 2250]
gi|422581035|ref|ZP_16656179.1| oligoribonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422680410|ref|ZP_16738682.1| oligoribonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330865886|gb|EGH00595.1| oligoribonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|331009756|gb|EGH89812.1| oligoribonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 178
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|332018384|gb|EGI58978.1| Putative oligoribonuclease [Acromyrmex echinatior]
Length = 228
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 121/185 (65%)
Query: 59 SQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECL 118
++T E + + +VW+D+EMTGL++E ILE+AC ITD +L + + ++V+HQ + L
Sbjct: 42 TETRNEIKNEKHIVWLDMEMTGLEVETCHILEVACFITDEQLELASDYLNIVVHQPDKVL 101
Query: 119 DSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMF 178
++M +WC+ H+ SGL + S T EA+++ + F++ +V LAGNSVY+D +F
Sbjct: 102 ENMSDWCKVQHKKSGLINECRLSKTTLEEAQQRTLNFLENHVPKGACPLAGNSVYMDRIF 161
Query: 179 LKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYY 238
LKKYMP + + + ++D+S+IK L RW P + P K+ HRA DI++S+ EL+YY
Sbjct: 162 LKKYMPLIDNYLHYRIIDISTIKDLARRWQPTISKAAPKKQHCHRAEHDIKDSLNELRYY 221
Query: 239 KENIF 243
++ +F
Sbjct: 222 RKYLF 226
>gi|389626611|ref|XP_003710959.1| oligoribonuclease [Magnaporthe oryzae 70-15]
gi|351650488|gb|EHA58347.1| oligoribonuclease [Magnaporthe oryzae 70-15]
Length = 256
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 3/182 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLT-KSVEGPDLVIHQTKECLDSMGEWCQNH 128
PLVWID EMTGL + + I+EI C++TDG L K EG V+HQT+E +D M EWC
Sbjct: 40 PLVWIDCEMTGLNPDSEEIIEIFCLVTDGDLNLKDEEGWGTVVHQTQERMDKMDEWCTKQ 99
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT +V+ S T EA ++ ++KK+V LLAG+SV+ D FL++ +
Sbjct: 100 HGGSGLTARVVGSTTTPEEAADGLLAYIKKHVPHAGVALLAGSSVHHDRAFLRRAPYNRV 159
Query: 188 SLFSHV-LVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ H ++DVSSIK RW P+ +KVP+K+ H A DDI ESI E KYY+E +F
Sbjct: 160 TDHLHYRILDVSSIKEAAKRWAPKVAKKVPNKKGTHLARDDILESIEEAKYYREGLFAKA 219
Query: 247 LK 248
L+
Sbjct: 220 LQ 221
>gi|422373603|ref|ZP_16453906.1| exonuclease [Escherichia coli MS 60-1]
gi|324015053|gb|EGB84272.1| exonuclease [Escherichia coli MS 60-1]
Length = 199
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 26 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A GL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 86 ACGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|422630435|ref|ZP_16695632.1| oligoribonuclease [Pseudomonas syringae pv. pisi str. 1704B]
gi|422667542|ref|ZP_16727405.1| oligoribonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440720736|ref|ZP_20901148.1| oligoribonuclease [Pseudomonas syringae BRIP34876]
gi|440727809|ref|ZP_20908035.1| oligoribonuclease [Pseudomonas syringae BRIP34881]
gi|443641296|ref|ZP_21125146.1| 3'-to-5' oligoribonuclease [Pseudomonas syringae pv. syringae B64]
gi|330939856|gb|EGH43089.1| oligoribonuclease [Pseudomonas syringae pv. pisi str. 1704B]
gi|330978958|gb|EGH78017.1| oligoribonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440363214|gb|ELQ00384.1| oligoribonuclease [Pseudomonas syringae BRIP34881]
gi|440365106|gb|ELQ02220.1| oligoribonuclease [Pseudomonas syringae BRIP34876]
gi|443281313|gb|ELS40318.1| 3'-to-5' oligoribonuclease [Pseudomonas syringae pv. syringae B64]
Length = 178
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|407714361|ref|YP_006834926.1| oligoribonuclease [Burkholderia phenoliruptrix BR3459a]
gi|407236545|gb|AFT86744.1| oligoribonuclease [Burkholderia phenoliruptrix BR3459a]
Length = 203
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Query: 57 QNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
+ +Q P M LVW+D+EMTGL + DRI+EIA ++T+ L + VEGP L IHQ+ E
Sbjct: 6 ETAQQPPLVRSDMNLVWLDMEMTGLDPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDE 65
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDF 176
L M +W QN H SGL +V S ++E +A + +F+ V + GNS+ D
Sbjct: 66 TLAKMDQWNQNTHGRSGLIDRVKASTVSEADATVLIRDFLGAYVPPGKSPMCGNSICQDR 125
Query: 177 MFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELK 236
F+ ++MP+L + F + +DVS++K LC RW P Y+ K H AL DI ESI ELK
Sbjct: 126 RFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELK 184
Query: 237 YYKENIF 243
YY+E+
Sbjct: 185 YYREHFL 191
>gi|409357100|ref|ZP_11235485.1| oligoribonuclease [Dietzia alimentaria 72]
Length = 220
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL+ D ++EIA ++TD +L EG D+VIH LD+M + H
Sbjct: 24 IVWIDCEMTGLETSSDALVEIAALVTDSELNVLGEGVDIVIHAPDTKLDAMLPVVREMHA 83
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
+SGLT+++ S +T EAEK V++++++ V + + LAGNS+ D F+ + MP+L
Sbjct: 84 SSGLTEEIRRSTVTLAEAEKAVLDYIREWVPVSGSAPLAGNSIGTDRGFIARDMPELNGY 143
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 144 LHYRMIDVSSIKELCKRWYPRIYFGQPDKGMSHRALADIKESIRELQYYRGTAF 197
>gi|365836699|ref|ZP_09378087.1| oligoribonuclease [Hafnia alvei ATCC 51873]
gi|364563597|gb|EHM41401.1| oligoribonuclease [Hafnia alvei ATCC 51873]
Length = 181
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL EVDRI+EIA ++TD L EGP + +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLNPEVDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S E A ++ +EF+++ V + GNSV D FL +YMP+L F
Sbjct: 68 GSGLVERVKASAFDEATAAQKTIEFLQQWVPAGVSPICGNSVGQDRRFLFRYMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQGTHQALDDIRESVAELAYYREHFIQ 180
>gi|339056134|ref|ZP_08648670.1| 3'-to-5' oligoribonuclease (orn) [gamma proteobacterium IMCC2047]
gi|330720662|gb|EGG98910.1| 3'-to-5' oligoribonuclease (orn) [gamma proteobacterium IMCC2047]
Length = 182
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + D I+EIA I+TD L EGP IHQ+ E + M EW N H
Sbjct: 7 LIWVDLEMTGLEPDHDTIIEIATIVTDSDLNVIAEGPVFAIHQSAETMAGMDEWNTNQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++VL S ++ +AE + + ++++ V + GNS+ D F+ KYMP L F
Sbjct: 67 GSGLTQRVLDSDVSMEQAEAETIAWLEQYVEAGKSPMCGNSIGQDRRFMVKYMPKLEVFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 249
+ +DVSS+K L RW P D K H ALDDIR+SI EL++Y+E F+ LKK
Sbjct: 127 HYRNLDVSSVKELARRWRP-DVLAGVKKNGSHLALDDIRDSIAELQHYRETFFR--LKK 182
>gi|167581087|ref|ZP_02373961.1| oligoribonuclease [Burkholderia thailandensis TXDOH]
Length = 201
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 108/182 (59%), Gaps = 1/182 (0%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M
Sbjct: 11 PALVRNELNLVWLDMEMTGLNPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKM 70
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
+W +N H SGL +V S +TE +A Q+ F+ + V + GNS+ D F+ +
Sbjct: 71 DDWNKNTHGRSGLIDRVRASSVTEADAAAQIEAFLGQYVPPGKSPMCGNSICQDRRFMAR 130
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
+MP+L F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E
Sbjct: 131 WMPELERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYRER 189
Query: 242 IF 243
Sbjct: 190 FL 191
>gi|422639072|ref|ZP_16702502.1| oligoribonuclease [Pseudomonas syringae Cit 7]
gi|440742873|ref|ZP_20922195.1| oligoribonuclease [Pseudomonas syringae BRIP39023]
gi|330951466|gb|EGH51726.1| oligoribonuclease [Pseudomonas syringae Cit 7]
gi|440376724|gb|ELQ13387.1| oligoribonuclease [Pseudomonas syringae BRIP39023]
Length = 178
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTVSMAEAETQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|409405236|ref|ZP_11253698.1| oligoribonuclease [Herbaspirillum sp. GW103]
gi|386433785|gb|EIJ46610.1| oligoribonuclease [Herbaspirillum sp. GW103]
Length = 189
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 108/177 (61%), Gaps = 1/177 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
+M LVW+D+EMTGL + DRI+E+A ++TD +L EGP L IHQ+ E LD M W +
Sbjct: 13 EMNLVWVDMEMTGLDPDKDRIIEVAVVVTDAELNVLGEGPVLAIHQSDELLDGMDAWNKG 72
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGL +V S +TE +AE+Q++ F+K+ V + GNS+ D F+ + MP L
Sbjct: 73 THGRSGLIDRVKASTVTEADAEQQIIAFLKQYVPAGKSPMCGNSICQDRRFMVRGMPKLE 132
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
F + +DVS++K LC RW P K Q H AL DI ESI ELKYY+E+ K
Sbjct: 133 EFFHYRNLDVSTLKELCKRWKPEIATGF-KKRQMHTALADILESIEELKYYREHFIK 188
>gi|422619516|ref|ZP_16688205.1| oligoribonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|424065746|ref|ZP_17803220.1| oligoribonuclease [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|424070449|ref|ZP_17807884.1| oligoribonuclease [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|330899885|gb|EGH31304.1| oligoribonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|408000604|gb|EKG40954.1| oligoribonuclease [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408003026|gb|EKG43243.1| oligoribonuclease [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 178
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NWFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|440463455|gb|ELQ33035.1| oligoribonuclease [Magnaporthe oryzae Y34]
Length = 223
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 3/182 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLT-KSVEGPDLVIHQTKECLDSMGEWCQNH 128
PLVWID EMTGL + + I+EI C++TDG L K EG V+HQT+E +D M EWC
Sbjct: 7 PLVWIDCEMTGLNPDSEEIIEIFCLVTDGDLNLKDEEGWGTVVHQTQERMDKMDEWCTKQ 66
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT +V+ S T EA ++ ++KK+V LLAG+SV+ D FL++ +
Sbjct: 67 HGGSGLTARVVGSTTTPEEAADGLLAYIKKHVPHAGVALLAGSSVHHDRAFLRRAPYNRV 126
Query: 188 SLFSHV-LVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ H ++DVSSIK RW P+ +KVP+K+ H A DDI ESI E KYY+E +F
Sbjct: 127 TDHLHYRILDVSSIKEAAKRWAPKVAKKVPNKKGTHLARDDILESIEEAKYYREGLFAKA 186
Query: 247 LK 248
L+
Sbjct: 187 LQ 188
>gi|90416474|ref|ZP_01224405.1| oligoribonuclease [gamma proteobacterium HTCC2207]
gi|90331673|gb|EAS46901.1| oligoribonuclease [gamma proteobacterium HTCC2207]
Length = 188
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E +D M EW H
Sbjct: 15 LIWIDLEMTGLSPERDRIIEIATVVTDKDLNVLAEGPMIAVHQSDELIDGMDEWNTRQHG 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +TE EAE +EF+++ V + + GNS+ D FL YM DL F
Sbjct: 75 GSGLTERVRQSLVTEAEAELATIEFLRQWVPAGSSPMCGNSICQDRRFLANYMTDLQRFF 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
+ +DVS++K L RW P + K H A+DDI +SI EL+YY+E
Sbjct: 135 HYRNLDVSTLKELVQRWKP-ELANGFKKRGSHLAMDDIHDSIRELEYYRE 183
>gi|227495351|ref|ZP_03925667.1| exoribonuclease II [Actinomyces coleocanis DSM 15436]
gi|226831221|gb|EEH63604.1| exoribonuclease II [Actinomyces coleocanis DSM 15436]
Length = 207
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 112/175 (64%), Gaps = 2/175 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL +E D ++E+A ++TD +L G DL+I + E L +M ++ +N H
Sbjct: 9 PLVWIDCEMTGLDVEKDALVEVAVVVTDEELNLLDPGIDLLIKPSAEALANMNDFVRNMH 68
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL L +G++ EAE++V+ +VKK V LLAGNS+ D MFL++YMP L
Sbjct: 69 TTSGLLDD-LENGISLAEAEERVLAYVKKFVPQAKRGLLAGNSIGTDKMFLERYMPRLMG 127
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWY R + + P K HRAL DI ESI EL YY++ +F
Sbjct: 128 HLHYRVVDVSSIKELAKRWYHRVFEEAPEKNGGHRALADILESIQELIYYRKMLF 182
>gi|397166349|ref|ZP_10489794.1| oligoribonuclease [Enterobacter radicincitans DSM 16656]
gi|396092104|gb|EJI89669.1| oligoribonuclease [Enterobacter radicincitans DSM 16656]
Length = 181
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S L +R AE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASQLDDRAAELATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEVLEGL-KKQNTHQALDDIRESVAELAYYREHFIK 180
>gi|358057032|dbj|GAA96939.1| hypothetical protein E5Q_03613 [Mixia osmundae IAM 14324]
Length = 239
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 109/181 (60%), Gaps = 11/181 (6%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D EMTGL ++ DRI+EIA ++TD LT EG + V+ K LD M EWC H
Sbjct: 56 LLWVDCEMTGLNLKTDRIIEIAAMVTDKDLTLLDEGIEYVVRTDKSVLDQMDEWCTKTHS 115
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP-----LLAGNSVYVDFMFLKKYMPD 185
+GLT+ + S + E +++V E+VK+ Y P +LAG+SV+ D F++K MP
Sbjct: 116 GTGLTQACIASKHSIEEVDRKVTEYVKR----YFPDDRSAVLAGSSVHADANFIRKDMPL 171
Query: 186 LASLFSHVLVDVSSIKALCMRWY--PRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
LA + +VDVSS+K L RWY PR R Q+HRA DDI SI ELK Y+ +F
Sbjct: 172 LAKCLHYRIVDVSSVKELVARWYSLPRQERDPKQGGQQHRARDDIMASIKELKRYRSTVF 231
Query: 244 K 244
K
Sbjct: 232 K 232
>gi|66043831|ref|YP_233672.1| oligoribonuclease [Pseudomonas syringae pv. syringae B728a]
gi|422673814|ref|ZP_16733171.1| oligoribonuclease [Pseudomonas syringae pv. aceris str. M302273]
gi|75503630|sp|Q4ZYY8.1|ORN_PSEU2 RecName: Full=Oligoribonuclease
gi|63254538|gb|AAY35634.1| Exonuclease [Pseudomonas syringae pv. syringae B728a]
gi|330971545|gb|EGH71611.1| oligoribonuclease [Pseudomonas syringae pv. aceris str. M302273]
Length = 178
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NWFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|238764684|ref|ZP_04625628.1| Oligoribonuclease [Yersinia kristensenii ATCC 33638]
gi|238697080|gb|EEP89853.1| Oligoribonuclease [Yersinia kristensenii ATCC 33638]
Length = 181
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPLRDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++ +AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVQRVKDSPFSDSDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKKNTHQALDDIRESVAELAYYREHFIQS 181
>gi|381162705|ref|ZP_09871935.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
azurea NA-128]
gi|379254610|gb|EHY88536.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
azurea NA-128]
Length = 202
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD L EG DLVIH + L +M + ++ H
Sbjct: 5 LVWIDCEMTGLDLAKDALIEIAVLVTDADLNVLGEGVDLVIHADDDALANMPDVVRDMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE++ + +++++V + LAGNS+ D F+ + MP+L +
Sbjct: 65 RSGLTEEVRRSTMTIEEAEQRALAYIREHVPDPQSAPLAGNSIATDRGFIARDMPELDAH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+ F
Sbjct: 125 LHYRMVDVSSVKELVRRWYPRIYYAKPEKGLAHRALADIRESIGELEYYRRTAF 178
>gi|300715033|ref|YP_003739836.1| oligoribonuclease [Erwinia billingiae Eb661]
gi|299060869|emb|CAX57976.1| Oligoribonuclease [Erwinia billingiae Eb661]
Length = 181
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP +HQ+ L M EW N H
Sbjct: 8 LIWIDLEMTGLDPEQDRIIEIATLVTDADLNILAEGPVFAVHQSDAQLALMDEWNVNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R AE+ +EF+KK V + + GNS+ D FL KYMP+L + F
Sbjct: 68 NSGLVERVKASQYDDRAAEQATIEFLKKWVPENSSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K+ H+A+DDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKP---GILPGFKKQGTHQAMDDIRESVAELAYYREHFIQ 180
>gi|424776160|ref|ZP_18203145.1| oligoribonuclease [Alcaligenes sp. HPC1271]
gi|422888620|gb|EKU31006.1| oligoribonuclease [Alcaligenes sp. HPC1271]
Length = 181
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL + +RI+E+A ++T+ LT EGP LV+HQ+ LD M W + H
Sbjct: 8 LVWLDMEMTGLDPDKERIIEVAVVVTEADLTLVAEGPVLVVHQSNALLDGMDAWNKGTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE Q++EF+K++V L GN++ D F+ +YMP L + F
Sbjct: 68 RSGLIDKVKASTLTEAQAEDQLLEFLKEHVPAGKSPLCGNTISQDRRFMYRYMPRLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L +RW P + K K+ +H AL DI ESI ELK+Y+E+ +
Sbjct: 128 HYRNLDVSTLKELALRWKP-EVVKSFVKQSRHEALADIYESIDELKHYREHFIR 180
>gi|410693103|ref|YP_003623724.1| oligoribonuclease [Thiomonas sp. 3As]
gi|294339527|emb|CAZ87886.1| oligoribonuclease [Thiomonas sp. 3As]
Length = 203
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+E+A ++TD +LT VEGP L IHQ+ L M W QN H
Sbjct: 19 LIWVDMEMTGLNPDTDRIIEVAVVVTDPQLTVRVEGPVLAIHQSDAVLAGMDAWNQNTHG 78
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S + E +A K ++ F+KK V + GN++ D F+ + MP+L + F
Sbjct: 79 KSGLTDRVRASTVDEAQASKAIIAFLKKYVPAGKSPMCGNTICQDRRFMARGMPELEAYF 138
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+Q H AL DI+ESI EL++Y+E+ +
Sbjct: 139 HYRNLDVSTLKELARRWRP-ELVSAFKKQQAHTALADIQESIDELRHYREHFLR 191
>gi|374263269|ref|ZP_09621821.1| hypothetical protein LDG_8266 [Legionella drancourtii LLAP12]
gi|363536531|gb|EHL29973.1| hypothetical protein LDG_8266 [Legionella drancourtii LLAP12]
Length = 184
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA ++TD L EGP I Q KE LD+M W H
Sbjct: 7 LIWIDLEMTGLDPEENRIIEIATVVTDPHLNIIGEGPVFAIAQAKEHLDAMDAWNTKQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+VL S ++E +AE+Q + F+K V + GNSV D FL KYMP+LA+ F
Sbjct: 67 QSGLVKRVLDSKVSEADAEQQTINFLKYYVDKGKSPMCGNSVCQDRRFLYKYMPELAAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENI 242
+ +DVS++K L +RW P +K KH AL+DI++SI EL YY+++
Sbjct: 127 HYRNLDVSTLKELAIRWKPTLLNGF-TKSSKHLALEDIKDSIAELVYYRQHF 177
>gi|271968895|ref|YP_003343091.1| oligoribonuclease [Streptosporangium roseum DSM 43021]
gi|270512070|gb|ACZ90348.1| putative oligoribonuclease; K01175 [Streptosporangium roseum DSM
43021]
Length = 200
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+AC++TDG+L + EG D+VI E L+ M E + H
Sbjct: 5 LVWIDCEMTGLDLGRDALVEVACVVTDGELNQLDEGVDVVIKPPPEALEQMSEVVREMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
ASGL + VL G+T EAE V+E++K ++ L GNS+ D F+ + MP +
Sbjct: 65 ASGLLE-VLGGGVTLAEAEALVLEYIKGHIPEPKKAPLCGNSISTDRSFIARDMPAVDMF 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSS+K L RWYPR Y P K+ HRAL DI ESI EL+YY+ +F
Sbjct: 124 LHYRMIDVSSVKELARRWYPRVYFASPEKQGGHRALADITESIRELRYYRAAVF 177
>gi|345297565|ref|YP_004826923.1| oligoribonuclease [Enterobacter asburiae LF7a]
gi|345091502|gb|AEN63138.1| Oligoribonuclease [Enterobacter asburiae LF7a]
Length = 181
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +R+AE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASTQGDRDAELATIEFLKQWVPEGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYRENFIK 180
>gi|163749340|ref|ZP_02156589.1| oligoribonuclease [Shewanella benthica KT99]
gi|161331059|gb|EDQ01985.1| oligoribonuclease [Shewanella benthica KT99]
Length = 181
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E D+++EIA I+TD +L EGP + I QT E L +M EW Q HH
Sbjct: 8 LIWVDLEMTGLDPETDKVIEIATIVTDKELNILAEGPVIAIFQTDEQLATMDEWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +E +A +EFV + V + GNS+ D FL KYMP L F
Sbjct: 68 ESGLVERVRSSQYSEDDAIAMTIEFVSQYVPQGISPMCGNSIGQDRRFLNKYMPKLEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P + +K+ H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNIDVSTIKELTRRWKP-ELMDGFTKQGTHKALVDIQESIAELQYYRAKVFK 180
>gi|410086320|ref|ZP_11283032.1| 3'-to-5' oligoribonuclease (orn) [Morganella morganii SC01]
gi|421491524|ref|ZP_15938887.1| ORN [Morganella morganii subsp. morganii KT]
gi|455737374|ref|YP_007503640.1| 3'-to-5' oligoribonuclease (orn) [Morganella morganii subsp.
morganii KT]
gi|400193958|gb|EJO27091.1| ORN [Morganella morganii subsp. morganii KT]
gi|409767165|gb|EKN51245.1| 3'-to-5' oligoribonuclease (orn) [Morganella morganii SC01]
gi|455418937|gb|AGG29267.1| 3'-to-5' oligoribonuclease (orn) [Morganella morganii subsp.
morganii KT]
Length = 181
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP L +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILAEGPVLAVHQSDEQLGLMDDWNVRTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT++V S ++ +AE+ + F+++ V + GNSV D FL +YMP L F
Sbjct: 68 ASGLTERVRASTYSDAQAEQATIAFLEQWVPQGASPICGNSVGQDRRFLFRYMPALEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+ALDDIRESI EL YY+E +
Sbjct: 128 HYRYLDVSTLKELARRWKPEVLDGF-TKKNTHQALDDIRESIAELAYYRETFIR 180
>gi|374334895|ref|YP_005091582.1| oligoribonuclease [Oceanimonas sp. GK1]
gi|372984582|gb|AEY00832.1| oligoribonuclease [Oceanimonas sp. GK1]
Length = 181
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL+ + RI+EIA I+TD +L EGP L IHQ++ L M +W H
Sbjct: 8 LVWIDLEMTGLEPDEHRIIEIASIVTDKELNILAEGPVLAIHQSEAELGKMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E EA Q + F+++ V + L GNS+ D FL ++MP+L + F
Sbjct: 68 GSGLVARVQASTISEAEAVAQTLAFLRQWVPQGSSPLCGNSIGQDRRFLARHMPELEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS+IK L RW P + +K+ H+ALDDIRESI EL++Y++++F
Sbjct: 128 HYRNVDVSTIKELVRRWQPALLEQF-TKKGSHQALDDIRESIAELQFYRQHVF 179
>gi|306819268|ref|ZP_07452979.1| oligoribonuclease [Mobiluncus mulieris ATCC 35239]
gi|304648050|gb|EFM45364.1| oligoribonuclease [Mobiluncus mulieris ATCC 35239]
Length = 208
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 110/178 (61%), Gaps = 4/178 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL + D ++EI I+TD L G DL+I ++ LD+MG++ + H
Sbjct: 12 LVWVDCEMTGLDLATDELIEIGVIVTDFDLNPLDTGIDLLIKPSQTALDNMGDFVREMHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL ++ H GL EA +QV+E+V++ V PL AGNSV D FLKK MPD
Sbjct: 72 KSGLLDELDH-GLPVTEAARQVLEYVQRFVPEAGKAPL-AGNSVGTDKTFLKKQMPDFVD 129
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +VDVSSIK L RW+P+ Y P K HRAL DI++SI EL+YY+ +F ++
Sbjct: 130 WLHYRIVDVSSIKELTARWFPKVYGIAPEKFGNHRALGDIQDSINELRYYRATLFPSD 187
>gi|392944271|ref|ZP_10309913.1| oligoribonuclease (3'->5' exoribonuclease) [Frankia sp. QA3]
gi|392287565|gb|EIV93589.1| oligoribonuclease (3'->5' exoribonuclease) [Frankia sp. QA3]
Length = 272
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL D +LE+AC++TD +L EG DLVI E L++M + H+
Sbjct: 37 LVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIDLVISAPDEALEAMVPVVREMHQ 96
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT V S L +AE QV+++V+ V L GNS+ D FL ++MP L +
Sbjct: 97 TSGLTAAVRASTLPLADAEAQVLDYVRARVPEVRKAPLCGNSIATDRTFLARHMPSLDAH 156
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWY R Y P K HRAL DI+ESI EL+YY++ +F
Sbjct: 157 LHYRMIDVSSIKELARRWYVRTYYAAPVKRGGHRALADIQESIEELRYYRQALF 210
>gi|320352856|ref|YP_004194195.1| Exonuclease RNase T and DNA polymerase III [Desulfobulbus
propionicus DSM 2032]
gi|320121358|gb|ADW16904.1| Exonuclease RNase T and DNA polymerase III [Desulfobulbus
propionicus DSM 2032]
Length = 181
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 107/176 (60%), Gaps = 2/176 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL D+ILE+A ++TD L +GP + IHQ +E L +M W HH
Sbjct: 7 LVWIDLEMTGLNPFTDKILEVATVVTDSHLEILADGPVIAIHQPEEVLAAMDPWNTQHHR 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S T R+AE + +EF+K+ V + GNSV+ D FL ++MP+L F
Sbjct: 67 ESGLIDRVRRSTFTCRQAELETLEFIKQWVDKRVSPMCGNSVWHDRRFLARFMPELEQYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L +RW P D K SKE H A DDIRESI ELK+Y K +
Sbjct: 127 HYRNIDVSTLKELALRWAP-DLPKF-SKECHHLAHDDIRESIAELKHYGNCFIKKD 180
>gi|24372183|ref|NP_716225.1| 3'-5' oligoribonuclease Orn [Shewanella oneidensis MR-1]
gi|29611787|sp|Q8EJ78.1|ORN_SHEON RecName: Full=Oligoribonuclease
gi|24346089|gb|AAN53670.1| 3'-5' oligoribonuclease Orn [Shewanella oneidensis MR-1]
Length = 181
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ +VDR++EIA ++TD +L +GP + IHQ+ E L +M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + E EA Q + F+ + V + GNSV D FL +YM +L F
Sbjct: 68 ESGLIERVRASQVNEAEAVAQTIAFLAQYVPKGVSPMCGNSVGQDRRFLNRYMRELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNLDVSTVKELVKRWSPETMAGF-KKQNTHQALQDIQESIAELQYYRSKVFK 180
>gi|302189797|ref|ZP_07266470.1| oligoribonuclease [Pseudomonas syringae pv. syringae 642]
Length = 178
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPALE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|296135421|ref|YP_003642663.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
gi|295795543|gb|ADG30333.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
Length = 203
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+E+A ++TD +LT VEGP L IHQ+ L M W QN H
Sbjct: 19 LIWVDMEMTGLNPDTDRIIEVAVVVTDPQLTVRVEGPVLAIHQSDAVLAGMDAWNQNTHG 78
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT +V S + E +A K ++ F+KK V + GN++ D F+ + MP+L + F
Sbjct: 79 KSGLTDRVRTSTVDEAQASKAIIAFLKKYVPAGKSPMCGNTICQDRRFMARGMPELETYF 138
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+Q H AL DI+ESI EL++Y+E+ +
Sbjct: 139 HYRNLDVSTLKELARRWRP-ELVSAFKKQQAHTALADIQESIDELRHYREHFLR 191
>gi|416019064|ref|ZP_11565957.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|416024089|ref|ZP_11568268.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|422402807|ref|ZP_16479867.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|320321892|gb|EFW77988.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|320331003|gb|EFW86977.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|330872242|gb|EGH06391.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 178
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S + EAE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTINMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|256821737|ref|YP_003145700.1| Exonuclease RNase T and DNA polymerase III [Kangiella koreensis DSM
16069]
gi|256795276|gb|ACV25932.1| Exonuclease RNase T and DNA polymerase III [Kangiella koreensis DSM
16069]
Length = 182
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E D ++EIA I+TD L EGP + IHQ+ E LD+M EWC H
Sbjct: 8 LIWVDLEMTGLDPETDVVIEIATIVTDKDLNILEEGPVIAIHQSDEVLDNMNEWCVVQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + E +A +EF+KK + + GNS+ D F+ K+MP L + F
Sbjct: 68 KSGLTERVRQSSINEDQASDLTLEFLKKWIDEGKSPMCGNSICQDRRFMVKHMPKLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P + +K H ALDDIRESI E +YY+E+ N
Sbjct: 128 HYRHIDVSTLKELARRWKPSILNGL-TKGATHLALDDIRESIEECRYYREHFIDLN 182
>gi|33593655|ref|NP_881299.1| oligoribonuclease [Bordetella pertussis Tohama I]
gi|33596303|ref|NP_883946.1| oligoribonuclease [Bordetella parapertussis 12822]
gi|33602411|ref|NP_889971.1| oligoribonuclease [Bordetella bronchiseptica RB50]
gi|384204945|ref|YP_005590684.1| oligoribonuclease [Bordetella pertussis CS]
gi|408416183|ref|YP_006626890.1| oligoribonuclease [Bordetella pertussis 18323]
gi|410421006|ref|YP_006901455.1| oligoribonuclease [Bordetella bronchiseptica MO149]
gi|410472369|ref|YP_006895650.1| oligoribonuclease [Bordetella parapertussis Bpp5]
gi|412338563|ref|YP_006967318.1| oligoribonuclease [Bordetella bronchiseptica 253]
gi|427815500|ref|ZP_18982564.1| oligoribonuclease [Bordetella bronchiseptica 1289]
gi|427817053|ref|ZP_18984116.1| oligoribonuclease [Bordetella bronchiseptica D445]
gi|41017436|sp|Q7VVH7.1|ORN_BORPE RecName: Full=Oligoribonuclease
gi|41017438|sp|Q7W9T4.1|ORN_BORPA RecName: Full=Oligoribonuclease
gi|41017439|sp|Q7WGX3.1|ORN_BORBR RecName: Full=Oligoribonuclease
gi|33563728|emb|CAE42963.1| oligoribonuclease [Bordetella pertussis Tohama I]
gi|33566072|emb|CAE36971.1| oligoribonuclease [Bordetella parapertussis]
gi|33576850|emb|CAE33930.1| oligoribonuclease [Bordetella bronchiseptica RB50]
gi|332383059|gb|AEE67906.1| oligoribonuclease [Bordetella pertussis CS]
gi|401778353|emb|CCJ63760.1| oligoribonuclease [Bordetella pertussis 18323]
gi|408442479|emb|CCJ49020.1| oligoribonuclease [Bordetella parapertussis Bpp5]
gi|408448301|emb|CCJ59982.1| oligoribonuclease [Bordetella bronchiseptica MO149]
gi|408768397|emb|CCJ53160.1| oligoribonuclease [Bordetella bronchiseptica 253]
gi|410566500|emb|CCN24063.1| oligoribonuclease [Bordetella bronchiseptica 1289]
gi|410568053|emb|CCN16075.1| oligoribonuclease [Bordetella bronchiseptica D445]
Length = 181
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQPDSLLDAMDNWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +KV S L E +AE+ ++EF+ ++V L GN++ D F+ YMP+L F
Sbjct: 68 KSGLIEKVKASTLGEAQAEQILLEFLAEHVPAGKSPLCGNTISQDRRFMYAYMPNLERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELKYY+E++ K
Sbjct: 128 HYRNLDVSTLKELARRWAPAVYKGF-DKKSRHEALADIYESIDELKYYREHLLKV 181
>gi|315502266|ref|YP_004081153.1| exonuclease rnase t and DNA polymerase III [Micromonospora sp. L5]
gi|315408885|gb|ADU07002.1| Exonuclease RNase T and DNA polymerase III [Micromonospora sp. L5]
Length = 196
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TD L +G D+VIH E LD M E + H
Sbjct: 5 LVWIDCEMTGLDLRRDALIEVAALVTDPDLNVLGDGVDVVIHADDEALDGMPEIVRTMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE V+++V V T L GNS+ D FL + M L +
Sbjct: 65 KSGLTEEVRRSTVTLAEAEDMVLDYVTSYVKDPRTAPLCGNSIATDRGFLARDMTRLDAH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DIRESI EL+YY+ +F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRVYFGQPQKGLAHRALADIRESIRELEYYRRTVF 178
>gi|187477876|ref|YP_785900.1| oligoribonuclease [Bordetella avium 197N]
gi|123515337|sp|Q2L2P5.1|ORN_BORA1 RecName: Full=Oligoribonuclease
gi|115422462|emb|CAJ48987.1| oligoribonuclease [Bordetella avium 197N]
Length = 181
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ+ L++M W ++ H
Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQSDSVLEAMDNWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE+Q+++F+ + V L GN++ D F+ YMP+L F
Sbjct: 68 KSGLIDKVRASTLTEAQAEQQLIDFLSQYVPAGKSPLCGNTISQDRRFMFAYMPNLERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELK+Y+E+ K
Sbjct: 128 HYRNLDVSTLKELARRWAPAVYKSF-EKKSRHEALADIYESIDELKHYREHFLK 180
>gi|379059120|ref|ZP_09849646.1| exonuclease RNase T and DNA polymerase III [Serinicoccus profundi
MCCC 1A05965]
Length = 205
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL D ++E+AC++TD +L +G D+VI ++ MG++ + H
Sbjct: 6 IVWIDCEMTGLDTVEDALVEVACLVTDSELNVLGDGVDVVIRPPDAAVEQMGDFVRAMHT 65
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL + L SG+T EA+++V+E+V+ +V G PL GN+V D FL + MP+L +
Sbjct: 66 ESGLLPE-LDSGVTLEEAQQRVMEYVRAHVPEGRKAPL-GGNTVSTDRAFLARDMPELDA 123
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVSSIK L RW+PR Y P+K HRAL DI +SI EL+YY+E +F+
Sbjct: 124 YLHYRIIDVSSIKELAKRWFPRAYYMAPAKTGGHRALGDIVDSIAELRYYREAVFR 179
>gi|336248342|ref|YP_004592052.1| oligoribonuclease [Enterobacter aerogenes KCTC 2190]
gi|334734398|gb|AEG96773.1| oligoribonuclease [Enterobacter aerogenes KCTC 2190]
Length = 181
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASTVGDREAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|375141151|ref|YP_005001800.1| oligoribonuclease [Mycobacterium rhodesiae NBB3]
gi|359821772|gb|AEV74585.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium rhodesiae
NBB3]
Length = 215
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + DR++EIA ++TD L +G D+VIH L SM + ++ H+
Sbjct: 5 LVWIDCEMTGLDLSSDRLIEIAVLVTDADLNILGDGIDVVIHADDAALSSMIDVVKDMHK 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L
Sbjct: 65 RSGLTEEVRTSTVDVATAEELVLDYIRTHVKQAKTAPLAGNSIATDRGFIARDMPKLDDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI ELKYY++ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRQTAF 178
>gi|317124466|ref|YP_004098578.1| exonuclease RNase T and DNA polymerase III [Intrasporangium calvum
DSM 43043]
gi|315588554|gb|ADU47851.1| Exonuclease RNase T and DNA polymerase III [Intrasporangium calvum
DSM 43043]
Length = 211
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++WID EMTGL + D ++E+A ++TD +LT EG D+VI LD M E+ ++ H
Sbjct: 17 IIWIDCEMTGLSLRTDALVEVAALVTDFELTVLGEGVDVVIRPPAAALDQMDEFVRDMHT 76
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL + L G+T EA+ V+++V+ V L GNSV D FL + MPDL +
Sbjct: 77 TSGLLDE-LDGGVTLEEAQSLVLDYVRSFVPEPRKAPLGGNSVATDRGFLARDMPDLETH 135
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DI+ESI EL+YY+E +F
Sbjct: 136 LHYRIIDVSSIKELSRRWYPRVYFNAPKKSGGHRALADIKESIAELRYYREAVF 189
>gi|226326657|ref|ZP_03802175.1| hypothetical protein PROPEN_00510 [Proteus penneri ATCC 35198]
gi|225204878|gb|EEG87232.1| exonuclease [Proteus penneri ATCC 35198]
Length = 181
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L EGP + +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPECDRIIEIATIVTDPQLNILAEGPVIAVHQSDEQLSLMDEWNTRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + A+K +EF++K V + GNSV D FL +YMP+L F
Sbjct: 68 GSGLVERVKASSYDDNSAQKATIEFLEKWVPKGVSPICGNSVGQDRRFLYRYMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRESI EL YY++ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILEGF-EKKNTHQALDDIRESIAELAYYRKTFIK 180
>gi|157963361|ref|YP_001503395.1| oligoribonuclease [Shewanella pealeana ATCC 700345]
gi|157848361|gb|ABV88860.1| Exonuclease RNase T and DNA polymerase III [Shewanella pealeana
ATCC 700345]
Length = 181
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ +VDRI+EIA I+TD +L +GP IHQ+ E L M +W Q HH
Sbjct: 8 LIWVDLEMTGLEPDVDRIIEIATIVTDKELNIIAQGPVFAIHQSDEQLALMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + E +A + + F+ + V + GNS+ D FL +YMP+L F
Sbjct: 68 QSGLVDRVRASTINEEQAIAETIAFLSQYVPAGASPMCGNSIGQDRRFLNRYMPELEGYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P SK+ H+AL DI ESI EL++Y+ +F
Sbjct: 128 HYRNIDVSTIKELVRRWEPSAMEGF-SKKNTHQALQDIEESIAELQFYRAKVF 179
>gi|319761926|ref|YP_004125863.1| exonuclease rnase t and DNA polymerase iii [Alicycliphilus
denitrificans BC]
gi|330826210|ref|YP_004389513.1| Exonuclease RNase T and DNA polymerase III [Alicycliphilus
denitrificans K601]
gi|317116487|gb|ADU98975.1| Exonuclease RNase T and DNA polymerase III [Alicycliphilus
denitrificans BC]
gi|329311582|gb|AEB85997.1| Exonuclease RNase T and DNA polymerase III [Alicycliphilus
denitrificans K601]
Length = 203
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EM+GL E +R+LEIA ++T L VEGP LVIHQ LD+M W + H
Sbjct: 30 LVWLDCEMSGLNPETERLLEIAVVVTGPGLEPRVEGPVLVIHQPDTVLDAMDAWNKGTHG 89
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE+Q+++F+ + V + GNS+ D FL KYMP L + F
Sbjct: 90 RSGLIDKVRASTLTEADAEQQIIDFLSRYVPKGKVPMCGNSIGQDRRFLVKYMPRLEAFF 149
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P Y K Q+H AL D+ ESI EL +Y++++
Sbjct: 150 HYRNVDVSTLKELARRWKPEAYDSF-KKAQRHTALADVHESIDELVHYRQHLL 201
>gi|383865074|ref|XP_003708000.1| PREDICTED: probable oligoribonuclease-like [Megachile rotundata]
Length = 189
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 109/173 (63%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWIDLE++GL IE D I+E+AC+ITD L + +VI+Q LD+M +WC HH
Sbjct: 9 IVWIDLELSGLDIEKDTIIEVACVITDKDLKIMSKEFSVVINQPDTVLDAMNDWCTKHHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+ S ++ + AE+ ++ F+ V + LAGN++Y D +FL K MP +
Sbjct: 69 KSGLIKESRSSPISLKAAEQLLLNFLSSYVPKGSCPLAGNTIYQDRIFLFKLMPLVNDYL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSS+K L RW P Y P K+ HRAL DI+ESI EL+YYK+ +F
Sbjct: 129 HYRIIDVSSVKELARRWNPTIYTNSPRKKFCHRALMDIKESIQELQYYKDKLF 181
>gi|224586194|ref|YP_002639993.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|375117155|ref|ZP_09762325.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|375121775|ref|ZP_09766942.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|375126019|ref|ZP_09771183.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|379703592|ref|YP_005245320.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383498923|ref|YP_005399612.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|417330588|ref|ZP_12115121.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|417354462|ref|ZP_12130884.1| Oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|417377537|ref|ZP_12146420.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|417382827|ref|ZP_12148681.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417395124|ref|ZP_12157078.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|417440870|ref|ZP_12162090.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|417493437|ref|ZP_12173234.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|417535678|ref|ZP_12189068.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|422006174|ref|ZP_16353257.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|224470722|gb|ACN48552.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322717301|gb|EFZ08872.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|323132691|gb|ADX20121.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|326626042|gb|EGE32387.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326630269|gb|EGE36612.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|353561618|gb|EHC28507.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353561652|gb|EHC28528.1| Oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|353589577|gb|EHC48330.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|353603213|gb|EHC58370.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353611835|gb|EHC64391.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353613718|gb|EHC65751.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353629537|gb|EHC77321.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|353631333|gb|EHC78665.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353656239|gb|EHC97040.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|380465744|gb|AFD61147.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
Length = 185
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 12 LIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + ER+AE +EF+K V + GNS+ D FL KYMP+L + F
Sbjct: 72 GSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 132 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFIK 184
>gi|326933351|ref|XP_003212769.1| PREDICTED: oligoribonuclease, mitochondrial-like [Meleagris
gallopavo]
Length = 173
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 94/145 (64%)
Query: 103 SVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT 162
S +GP+L+I Q E LD M EWC+ HH SGLTK V S ++ ++AE + + FV++
Sbjct: 11 SPQGPNLIIKQPDELLDGMSEWCKEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPP 70
Query: 163 YTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKH 222
LAGNSV+ D FL KYMP + ++DVS++K LC RWYP +Y P K H
Sbjct: 71 GLCPLAGNSVHADKKFLDKYMPQFMRHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASH 130
Query: 223 RALDDIRESIMELKYYKENIFKTNL 247
RALDDIRESI EL++Y+++IFK +
Sbjct: 131 RALDDIRESIKELQFYRDSIFKRKM 155
>gi|427403407|ref|ZP_18894404.1| oligoribonuclease [Massilia timonae CCUG 45783]
gi|425717878|gb|EKU80833.1| oligoribonuclease [Massilia timonae CCUG 45783]
Length = 194
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 3/188 (1%)
Query: 57 QNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
+++ P + E+ LVW+D+EMTGL + DRI+E+A I+TD +L EGP IHQ+ E
Sbjct: 9 ESAAVPRQNEFN--LVWVDMEMTGLDPDNDRIIEVAVIVTDPELNIIAEGPVFAIHQSDE 66
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDF 176
LD M W + H SGL +V S ++E +AE++++ F+K+ V + + GNS+ D
Sbjct: 67 TLDKMDNWNKGTHGKSGLIDRVKASTVSEAQAEQELIAFLKQYVPSNKSPMCGNSICQDR 126
Query: 177 MFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELK 236
F+ + MP L + F + +DVS++K LC RW P K QKH AL DI ESI EL+
Sbjct: 127 RFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPEVATGF-KKHQKHTALADITESIEELR 185
Query: 237 YYKENIFK 244
YY+E+ +
Sbjct: 186 YYREHFIQ 193
>gi|337278852|ref|YP_004618323.1| oligoribonuclease [Ramlibacter tataouinensis TTB310]
gi|334729928|gb|AEG92304.1| candidate oligoribonuclease [Ramlibacter tataouinensis TTB310]
Length = 195
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL EVDRI+EIA I+T +L +EGP IHQ+ + LD M W + H
Sbjct: 20 LVWLDCEMTGLDPEVDRIIEIAVIVTGPQLEPRIEGPVFAIHQSDQQLDKMDAWNKGTHG 79
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S + E +AE +V+ F+++ V + GNS+ D FL +YMP L + F
Sbjct: 80 RSGLIDKVKASTVAEAQAEAEVLAFLERYVPRNATPMCGNSISQDRRFLVRYMPRLEAFF 139
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW+P Y K+QKH AL D+ ESI EL +Y+++ +
Sbjct: 140 HYRNLDVSTLKELAKRWHPEVYTGF-RKQQKHTALADVHESIDELAHYRQHFLR 192
>gi|167837413|ref|ZP_02464296.1| oligoribonuclease [Burkholderia thailandensis MSMB43]
Length = 201
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 1/182 (0%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P+ ++ LVW+D+EMTGL + DRI+EIA ++T+ L ++EGP L IHQ+ E L M
Sbjct: 11 PVLVRNELNLVWLDMEMTGLSPDTDRIIEIAVVVTNSTLDIALEGPVLAIHQSDETLAKM 70
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
+W +N H SGL +V S +TE +A Q+ F+ + V + GNS+ D F+ +
Sbjct: 71 DDWNKNTHGRSGLIDRVRASSVTEADAAAQIEAFLGQYVPPGKSPMCGNSICQDRRFMAR 130
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
+MP+L F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E
Sbjct: 131 WMPELERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYRER 189
Query: 242 IF 243
Sbjct: 190 FL 191
>gi|417543396|ref|ZP_12194574.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353656749|gb|EHC97404.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
Length = 185
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 12 LIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + ER+AE +EF+K V + GNS+ D FL KYMP+L + F
Sbjct: 72 GSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 132 HYRYLDVSTLKELARRWKPEILTGF-TKQGTHQAMDDIRESVAELAYYREHFIK 184
>gi|386840383|ref|YP_006245441.1| oligoribonuclease [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374100684|gb|AEY89568.1| oligoribonuclease [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451793676|gb|AGF63725.1| oligoribonuclease [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 200
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDRALETMPEVVRRMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L SG T +AE+QV+ +V+++V PL GNSV D FL + MP L
Sbjct: 65 ASGLLAE-LESGTTLEDAEEQVLAYVREHVKEPGKAPL-CGNSVGTDRGFLLRDMPTLED 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E IF
Sbjct: 123 YLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIF 177
>gi|167619167|ref|ZP_02387798.1| oligoribonuclease [Burkholderia thailandensis Bt4]
Length = 201
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 108/182 (59%), Gaps = 1/182 (0%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M
Sbjct: 11 PALVRNELNLVWLDMEMTGLNPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKM 70
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
+W +N H SGL +V S +TE +A Q+ F+ + V + GNS+ D F+ +
Sbjct: 71 DDWNKNTHGRSGLIDRVRVSSVTEADAAAQIEAFLGQYVPPGKSPMCGNSICQDRRFMAR 130
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
+MP+L F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E
Sbjct: 131 WMPELERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYRER 189
Query: 242 IF 243
Sbjct: 190 FL 191
>gi|260770593|ref|ZP_05879525.1| oligoribonuclease [Vibrio furnissii CIP 102972]
gi|375129182|ref|YP_004991276.1| oligoribonuclease [Vibrio furnissii NCTC 11218]
gi|260614423|gb|EEX39610.1| oligoribonuclease [Vibrio furnissii CIP 102972]
gi|315178350|gb|ADT85264.1| oligoribonuclease [Vibrio furnissii NCTC 11218]
Length = 181
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+EIA I+TD +L EGP L +HQ + L M +WC N H
Sbjct: 8 LIWIDLEMTGLDPETHKIIEIATIVTDSQLNILAEGPVLAVHQPESELQKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++E +A Q + F+++ V + GNS+ D FL K+MP L F
Sbjct: 68 QSGLVERVRQSQVSEDDAVAQTIAFLEQWVPAGKSPICGNSIGQDRRFLYKHMPRLEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P SK+ H ALDDIRESI EL++Y+ +F
Sbjct: 128 HYRYIDVSTIKELTRRWQPAVLDGF-SKQGSHLALDDIRESIAELQFYRSTVF 179
>gi|121607325|ref|YP_995132.1| oligoribonuclease [Verminephrobacter eiseniae EF01-2]
gi|121551965|gb|ABM56114.1| Exonuclease, RNase T and DNA polymerase III [Verminephrobacter
eiseniae EF01-2]
Length = 195
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL + DR+LEIA ++T L + GP LVIHQ++E LD M W + H
Sbjct: 22 LVWLDCEMTGLTPDTDRLLEIAVVVTGPNLEPRIAGPVLVIHQSQEWLDKMDAWNKGTHG 81
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV SG+TE +AE+Q++ F+ + V + GNS+ D FL +YMP+L F
Sbjct: 82 RSGLIDKVKASGITEAQAEQQIIAFLSQYVPKGQVPMCGNSIGQDRRFLARYMPELERFF 141
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P+ K QKH AL D+ ESI EL +Y++++
Sbjct: 142 HYRNVDVSTLKELAKRWKPQVCAGF-KKAQKHTALADVNESIDELAHYRKHLL 193
>gi|422594260|ref|ZP_16668551.1| oligoribonuclease [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330984568|gb|EGH82671.1| oligoribonuclease [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 178
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL ++D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDIDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTISMAEAEAHTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NWFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|317493562|ref|ZP_07951983.1| exonuclease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918505|gb|EFV39843.1| exonuclease [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 181
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL EVDRI+EIA ++TD L EGP + +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLNPEVDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S E A ++ +EF+++ V + GNSV D FL +YMP+L F
Sbjct: 68 GSGLVERVKASTFDEATAAQKTIEFLQQWVPAGVSPICGNSVGQDRRFLFRYMPELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQGTHQALDDIRESVAELAYYREHFIQ 180
>gi|257138397|ref|ZP_05586659.1| oligoribonuclease [Burkholderia thailandensis E264]
Length = 201
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 108/182 (59%), Gaps = 1/182 (0%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M
Sbjct: 11 PALVRNELNLVWLDMEMTGLNPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKM 70
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
+W +N H SGL +V S +TE +A Q+ F+ + V + GNS+ D F+ +
Sbjct: 71 DDWNKNTHGRSGLIDRVRVSSVTEADAAAQIEAFLGQYVPPGKSPMCGNSICQDRRFMAR 130
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
+MP+L F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E
Sbjct: 131 WMPELERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYRER 189
Query: 242 IF 243
Sbjct: 190 FL 191
>gi|167563592|ref|ZP_02356508.1| oligoribonuclease [Burkholderia oklahomensis EO147]
gi|167570756|ref|ZP_02363630.1| oligoribonuclease [Burkholderia oklahomensis C6786]
Length = 201
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 1/182 (0%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M
Sbjct: 11 PALVRNELNLVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKM 70
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
+W +N H SGL +V S +TE +A Q+ F+ ++V + GNS+ D F+ +
Sbjct: 71 DDWNKNTHGRSGLIDRVRASTVTEADAAAQIEAFLGQHVPPGKSPMCGNSICQDRRFMAR 130
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
+MP+L F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E+
Sbjct: 131 WMPELERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYREH 189
Query: 242 IF 243
Sbjct: 190 FL 191
>gi|340001699|ref|YP_004732583.1| oligoribonuclease [Salmonella bongori NCTC 12419]
gi|339515061|emb|CCC32839.1| oligoribonuclease [Salmonella bongori NCTC 12419]
Length = 181
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++ER+AE +EF+K V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASTMSERDAELATIEFLKAWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILTGF-TKQGTHQAMDDIRESVAELAYYREYFIK 180
>gi|92113396|ref|YP_573324.1| oligoribonuclease [Chromohalobacter salexigens DSM 3043]
gi|91796486|gb|ABE58625.1| Exonuclease [Chromohalobacter salexigens DSM 3043]
Length = 187
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + +RI+E+A +ITD L EGP L +HQ L M EW H
Sbjct: 14 LVWIDLEMTGLDPQRERIIEVATLITDNDLNLVAEGPVLAVHQPDALLAGMDEWNTRTHG 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + EAE+Q + F+K+ V + + GNSV+ D FL + MP+LA F
Sbjct: 74 DSGLTQRVRESRIDTAEAERQTLAFLKRYVTPNSSPMCGNSVHQDRRFLVREMPELADFF 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ K H+A+DDIRES+ EL +Y++ +
Sbjct: 134 HYRNLDVSTLKELAKRWNPQALEGF-EKRNTHQAMDDIRESLAELAHYRQTFLR 186
>gi|395230106|ref|ZP_10408414.1| oligoribonuclease [Citrobacter sp. A1]
gi|424733307|ref|ZP_18161872.1| oligoribonuclease [Citrobacter sp. L17]
gi|394716400|gb|EJF22155.1| oligoribonuclease [Citrobacter sp. A1]
gi|422892495|gb|EKU32354.1| oligoribonuclease [Citrobacter sp. L17]
Length = 181
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++V S + +REAE + F+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 SSGLVERVKASTMGDREAELATLAFLKEWVPEGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|16763172|ref|NP_458789.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|16767599|ref|NP_463214.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29144651|ref|NP_807993.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56416144|ref|YP_153219.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62182799|ref|YP_219216.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161505144|ref|YP_001572256.1| oligoribonuclease [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|161617623|ref|YP_001591588.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167553558|ref|ZP_02347307.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167994766|ref|ZP_02575857.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168231388|ref|ZP_02656446.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168237081|ref|ZP_02662139.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168244869|ref|ZP_02669801.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168263295|ref|ZP_02685268.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168467067|ref|ZP_02700915.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168822519|ref|ZP_02834519.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194446159|ref|YP_002043608.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194451819|ref|YP_002048396.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194472818|ref|ZP_03078802.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194733922|ref|YP_002117294.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197248139|ref|YP_002149267.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197263840|ref|ZP_03163914.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197365070|ref|YP_002144707.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|198244671|ref|YP_002218237.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200389037|ref|ZP_03215649.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204927249|ref|ZP_03218451.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|207859499|ref|YP_002246150.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213052288|ref|ZP_03345166.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213419498|ref|ZP_03352564.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
gi|213428680|ref|ZP_03361430.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213583916|ref|ZP_03365742.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213650568|ref|ZP_03380621.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|213850085|ref|ZP_03380983.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|238910511|ref|ZP_04654348.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289805592|ref|ZP_06536221.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
gi|289829989|ref|ZP_06547440.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|374981861|ref|ZP_09723184.1| 3'-to-5' oligoribonuclease (orn) [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|375004249|ref|ZP_09728584.1| exonuclease [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|378447666|ref|YP_005235298.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378453305|ref|YP_005240665.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378702193|ref|YP_005184151.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378957901|ref|YP_005215388.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378962586|ref|YP_005220072.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|378987022|ref|YP_005250178.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378991617|ref|YP_005254781.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|386589673|ref|YP_006086073.1| 3'-to-5' oligoribonuclease [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409248046|ref|YP_006888738.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416423476|ref|ZP_11690865.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416433156|ref|ZP_11696682.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416442152|ref|ZP_11702239.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416447233|ref|ZP_11705678.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416455356|ref|ZP_11710981.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416457815|ref|ZP_11712417.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416465097|ref|ZP_11716628.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416478921|ref|ZP_11721944.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416488903|ref|ZP_11725951.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416501314|ref|ZP_11731976.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416506463|ref|ZP_11734681.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416519642|ref|ZP_11739957.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416530760|ref|ZP_11745223.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416534776|ref|ZP_11747264.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416543427|ref|ZP_11752209.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416550171|ref|ZP_11755849.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416563844|ref|ZP_11762904.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416569063|ref|ZP_11765251.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416580664|ref|ZP_11772055.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416587716|ref|ZP_11776252.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416592127|ref|ZP_11778948.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416600087|ref|ZP_11784034.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416607561|ref|ZP_11788632.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416615638|ref|ZP_11793550.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416623742|ref|ZP_11797570.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416633563|ref|ZP_11801951.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416644207|ref|ZP_11806590.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416646404|ref|ZP_11807670.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416656021|ref|ZP_11812997.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416669443|ref|ZP_11819409.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416683739|ref|ZP_11824579.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416689170|ref|ZP_11825427.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416708533|ref|ZP_11833395.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416710048|ref|ZP_11834153.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416720241|ref|ZP_11841955.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726173|ref|ZP_11846234.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731383|ref|ZP_11849298.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416735765|ref|ZP_11851649.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416744965|ref|ZP_11856923.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416759534|ref|ZP_11864361.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416763856|ref|ZP_11867530.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416770364|ref|ZP_11871716.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|417338282|ref|ZP_12120158.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|417345620|ref|ZP_12125682.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|417362258|ref|ZP_12135947.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar Give
str. S5-487]
gi|417370062|ref|ZP_12141030.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417471594|ref|ZP_12167529.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|417522180|ref|ZP_12183702.1| Oligoribonuclease [Salmonella enterica subsp. enterica serovar
Uganda str. R8-3404]
gi|418482699|ref|ZP_13051712.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418492756|ref|ZP_13059236.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418496512|ref|ZP_13062946.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418500919|ref|ZP_13067310.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418503708|ref|ZP_13070067.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418508368|ref|ZP_13074671.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418511013|ref|ZP_13077282.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418523803|ref|ZP_13089791.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418767627|ref|ZP_13323691.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418770796|ref|ZP_13326817.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418777187|ref|ZP_13333118.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418778609|ref|ZP_13334517.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418785337|ref|ZP_13341170.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418790212|ref|ZP_13345989.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418794998|ref|ZP_13350713.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418796193|ref|ZP_13351885.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418802762|ref|ZP_13358387.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418807985|ref|ZP_13363542.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418811718|ref|ZP_13367243.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418816094|ref|ZP_13371587.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418822326|ref|ZP_13377739.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418824753|ref|ZP_13380095.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418833427|ref|ZP_13388353.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418833970|ref|ZP_13388881.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418841346|ref|ZP_13396165.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418847237|ref|ZP_13401998.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418848583|ref|ZP_13403321.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418854638|ref|ZP_13409306.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418857003|ref|ZP_13411635.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418864657|ref|ZP_13419183.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418866154|ref|ZP_13420618.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419731053|ref|ZP_14257977.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419732748|ref|ZP_14259653.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419741594|ref|ZP_14268284.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419745785|ref|ZP_14272406.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419750065|ref|ZP_14276533.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419790117|ref|ZP_14315793.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419792543|ref|ZP_14318178.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421359970|ref|ZP_15810257.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421362203|ref|ZP_15812458.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421366394|ref|ZP_15816598.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421373326|ref|ZP_15823467.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421377529|ref|ZP_15827624.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421380242|ref|ZP_15830305.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385593|ref|ZP_15835614.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421389193|ref|ZP_15839177.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421393944|ref|ZP_15843887.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399998|ref|ZP_15849889.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421402700|ref|ZP_15852557.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421407384|ref|ZP_15857192.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421412469|ref|ZP_15862224.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421416313|ref|ZP_15866033.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420461|ref|ZP_15870138.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421427206|ref|ZP_15876830.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421429072|ref|ZP_15878673.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436238|ref|ZP_15885770.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440734|ref|ZP_15890210.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421445329|ref|ZP_15894755.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421447434|ref|ZP_15896833.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421571583|ref|ZP_16017253.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421576515|ref|ZP_16022112.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421578223|ref|ZP_16023804.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421585002|ref|ZP_16030506.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421886548|ref|ZP_16317722.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|422028593|ref|ZP_16374890.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422033641|ref|ZP_16379708.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427557674|ref|ZP_18930214.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427575612|ref|ZP_18934804.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427597192|ref|ZP_18939721.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427621601|ref|ZP_18944605.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427645827|ref|ZP_18949493.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427658603|ref|ZP_18954210.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427663881|ref|ZP_18959121.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427681878|ref|ZP_18964009.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427802051|ref|ZP_18969513.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436597808|ref|ZP_20512692.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436683453|ref|ZP_20517834.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436801394|ref|ZP_20524900.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436806922|ref|ZP_20527036.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436813147|ref|ZP_20531432.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436846644|ref|ZP_20539414.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436850820|ref|ZP_20541488.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436859723|ref|ZP_20547609.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436866833|ref|ZP_20552262.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436871257|ref|ZP_20554655.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436881033|ref|ZP_20560632.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436889920|ref|ZP_20565586.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436898241|ref|ZP_20570252.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436903756|ref|ZP_20574025.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436913183|ref|ZP_20578750.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436917601|ref|ZP_20581109.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436925072|ref|ZP_20585546.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436937634|ref|ZP_20592761.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436944836|ref|ZP_20597246.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436948832|ref|ZP_20598986.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436959113|ref|ZP_20603564.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436973418|ref|ZP_20610681.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436984544|ref|ZP_20614497.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436996753|ref|ZP_20619721.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437006351|ref|ZP_20622588.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437017245|ref|ZP_20626302.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437034870|ref|ZP_20633191.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437041598|ref|ZP_20635558.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437047875|ref|ZP_20639150.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437056106|ref|ZP_20643641.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437068902|ref|ZP_20650916.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437077860|ref|ZP_20655718.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437083913|ref|ZP_20659480.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437089337|ref|ZP_20662133.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437105975|ref|ZP_20667115.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437120266|ref|ZP_20671404.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437129012|ref|ZP_20675638.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437137126|ref|ZP_20680194.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437144634|ref|ZP_20685105.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437151512|ref|ZP_20689319.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437163941|ref|ZP_20696919.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437167504|ref|ZP_20698775.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437174511|ref|ZP_20702156.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437185289|ref|ZP_20708885.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437194401|ref|ZP_20710994.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437259027|ref|ZP_20716927.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437271217|ref|ZP_20723578.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437277963|ref|ZP_20727193.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437284507|ref|ZP_20729678.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437307527|ref|ZP_20734920.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437333507|ref|ZP_20742443.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437337628|ref|ZP_20743383.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437367525|ref|ZP_20748925.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437411900|ref|ZP_20753073.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437438727|ref|ZP_20756998.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437459981|ref|ZP_20761190.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437475588|ref|ZP_20766761.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437493209|ref|ZP_20771983.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437511441|ref|ZP_20777078.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437522634|ref|ZP_20779107.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437559089|ref|ZP_20785505.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437574458|ref|ZP_20789730.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437591235|ref|ZP_20794663.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437610742|ref|ZP_20801053.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437622607|ref|ZP_20804780.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437642729|ref|ZP_20808177.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437663211|ref|ZP_20813822.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437685356|ref|ZP_20819122.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437697309|ref|ZP_20822872.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437713463|ref|ZP_20827444.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437736552|ref|ZP_20832743.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437795458|ref|ZP_20837494.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437805741|ref|ZP_20839275.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437816821|ref|ZP_20842686.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437936608|ref|ZP_20851420.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438077214|ref|ZP_20857396.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438088625|ref|ZP_20859915.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438103736|ref|ZP_20865544.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438109816|ref|ZP_20867667.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438138488|ref|ZP_20874642.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|440765351|ref|ZP_20944370.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440766711|ref|ZP_20945699.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440771869|ref|ZP_20950780.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|445127817|ref|ZP_21379809.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445139449|ref|ZP_21384326.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445152954|ref|ZP_21391086.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445161904|ref|ZP_21393537.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445181609|ref|ZP_21398397.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445232518|ref|ZP_21406097.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445240971|ref|ZP_21407611.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445329007|ref|ZP_21413299.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445347664|ref|ZP_21419319.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445360591|ref|ZP_21423522.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452121914|ref|YP_007472162.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|54038786|sp|P65600.2|ORN_SALTI RecName: Full=Oligoribonuclease
gi|54041583|sp|P65599.2|ORN_SALTY RecName: Full=Oligoribonuclease
gi|59797989|sp|Q5PLG7.3|ORN_SALPA RecName: Full=Oligoribonuclease
gi|81309509|sp|Q57GM7.3|ORN_SALCH RecName: Full=Oligoribonuclease
gi|25338361|pir||AI1047 oligoribonuclease (EC 3.1.-.-) [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16422913|gb|AAL23173.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16505480|emb|CAD06830.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29140290|gb|AAO71853.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56130401|gb|AAV79907.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62130432|gb|AAX68135.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|160866491|gb|ABX23114.1| hypothetical protein SARI_03281 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|161366987|gb|ABX70755.1| hypothetical protein SPAB_05483 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404822|gb|ACF65044.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194410123|gb|ACF70342.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194459182|gb|EDX48021.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194709424|gb|ACF88645.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195630566|gb|EDX49178.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197096547|emb|CAR62157.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197211842|gb|ACH49239.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197242095|gb|EDY24715.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197289951|gb|EDY29310.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197939187|gb|ACH76520.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199606135|gb|EDZ04680.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204323914|gb|EDZ09109.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205322027|gb|EDZ09866.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205327412|gb|EDZ14176.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205334333|gb|EDZ21097.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205336339|gb|EDZ23103.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205341098|gb|EDZ27862.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205347926|gb|EDZ34557.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206711302|emb|CAR35680.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261249445|emb|CBG27309.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267996684|gb|ACY91569.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160842|emb|CBW20373.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312915451|dbj|BAJ39425.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320088780|emb|CBY98538.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321223225|gb|EFX48295.1| 3'-to-5' oligoribonuclease (orn) [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322615515|gb|EFY12435.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618575|gb|EFY15464.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322622012|gb|EFY18862.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627084|gb|EFY23876.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322631043|gb|EFY27807.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637738|gb|EFY34439.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642402|gb|EFY39006.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322645663|gb|EFY42188.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650497|gb|EFY46905.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322653449|gb|EFY49779.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659724|gb|EFY55967.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662065|gb|EFY58281.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666186|gb|EFY62364.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672606|gb|EFY68717.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322676036|gb|EFY72107.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680520|gb|EFY76558.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684586|gb|EFY80590.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323192901|gb|EFZ78127.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197223|gb|EFZ82363.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323201660|gb|EFZ86724.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323213183|gb|EFZ97985.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215556|gb|EGA00300.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323219541|gb|EGA04026.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227844|gb|EGA11998.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323229014|gb|EGA13143.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236374|gb|EGA20450.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323237506|gb|EGA21567.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241828|gb|EGA25857.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248023|gb|EGA31960.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323254646|gb|EGA38457.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258295|gb|EGA41972.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323259572|gb|EGA43206.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265845|gb|EGA49341.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270289|gb|EGA53737.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|332991164|gb|AEF10147.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|353073587|gb|EHB39352.1| exonuclease [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|353561931|gb|EHC28739.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|353581818|gb|EHC42649.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar Give
str. S5-487]
gi|353582707|gb|EHC43282.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353622390|gb|EHC71961.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|353639498|gb|EHC84756.1| Oligoribonuclease [Salmonella enterica subsp. enterica serovar
Uganda str. R8-3404]
gi|357208512|gb|AET56558.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|357952711|gb|EHJ79558.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|363550386|gb|EHL34714.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363555061|gb|EHL39293.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363557403|gb|EHL41609.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363566882|gb|EHL50895.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363569234|gb|EHL53198.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363571388|gb|EHL55299.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363577070|gb|EHL60896.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366055253|gb|EHN19589.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366056942|gb|EHN21247.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366062581|gb|EHN26810.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067451|gb|EHN31601.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366072036|gb|EHN36128.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366079623|gb|EHN43605.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366085059|gb|EHN48950.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366831094|gb|EHN57960.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372208115|gb|EHP21611.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|374356458|gb|AEZ48219.1| Oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|379983944|emb|CCF89995.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|381291367|gb|EIC32616.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381292183|gb|EIC33387.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381302506|gb|EIC43545.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381305135|gb|EIC46079.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381307774|gb|EIC48623.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383796717|gb|AFH43799.1| 3'-to-5' oligoribonuclease (orn) [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392614541|gb|EIW96988.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392618502|gb|EIX00902.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392734919|gb|EIZ92100.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392737390|gb|EIZ94551.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392744180|gb|EJA01236.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392752434|gb|EJA09375.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392754816|gb|EJA11731.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392758595|gb|EJA15461.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392760424|gb|EJA17262.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392771062|gb|EJA27783.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392776159|gb|EJA32847.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392777813|gb|EJA34495.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392778286|gb|EJA34966.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392788001|gb|EJA44539.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392790315|gb|EJA46813.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392795643|gb|EJA52002.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392805878|gb|EJA61993.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392808316|gb|EJA64366.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392808675|gb|EJA64723.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392819950|gb|EJA75806.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392822883|gb|EJA78687.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392824493|gb|EJA80279.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392830353|gb|EJA86006.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392835429|gb|EJA91024.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392840668|gb|EJA96203.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|395983604|gb|EJH92796.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395990739|gb|EJH99869.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395991192|gb|EJI00317.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395997158|gb|EJI06200.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|395998850|gb|EJI07876.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396004228|gb|EJI13211.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396015991|gb|EJI24860.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396016289|gb|EJI25157.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396017805|gb|EJI26669.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396025777|gb|EJI34551.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396030804|gb|EJI39533.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396031106|gb|EJI39834.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396042784|gb|EJI51405.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396044489|gb|EJI53085.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396045601|gb|EJI54193.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396052701|gb|EJI61207.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396053598|gb|EJI62092.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396059934|gb|EJI68382.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396065632|gb|EJI74005.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396066227|gb|EJI74592.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396074736|gb|EJI83020.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|402518083|gb|EJW25469.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402520308|gb|EJW27661.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402525495|gb|EJW32784.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402530504|gb|EJW37721.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414011282|gb|EKS95252.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414012239|gb|EKS96163.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414012795|gb|EKS96705.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414026533|gb|EKT09800.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414027368|gb|EKT10611.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414030020|gb|EKT13165.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414040645|gb|EKT23254.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414041330|gb|EKT23904.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414045805|gb|EKT28173.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414054854|gb|EKT36785.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414059917|gb|EKT41457.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434940277|gb|ELL46949.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434958169|gb|ELL51745.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434968878|gb|ELL61604.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434975572|gb|ELL67860.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434976735|gb|ELL68940.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434977382|gb|ELL69500.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434987334|gb|ELL78976.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434987465|gb|ELL79105.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434993965|gb|ELL85349.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435001371|gb|ELL92489.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435004555|gb|ELL95518.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435004954|gb|ELL95880.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|435006911|gb|ELL97770.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435013789|gb|ELM04411.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435017851|gb|ELM08328.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435024856|gb|ELM15061.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435031443|gb|ELM21415.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435035198|gb|ELM25045.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435037927|gb|ELM27710.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435040437|gb|ELM30193.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435053610|gb|ELM43047.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435054917|gb|ELM44337.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435055158|gb|ELM44577.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435062153|gb|ELM51348.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435064184|gb|ELM53329.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435070499|gb|ELM59482.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435075710|gb|ELM64523.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435082329|gb|ELM70953.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435085864|gb|ELM74411.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435092866|gb|ELM81208.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435097970|gb|ELM86221.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435099453|gb|ELM87660.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435102472|gb|ELM90576.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435106997|gb|ELM94994.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435115484|gb|ELN03251.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435121154|gb|ELN08700.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435127272|gb|ELN14634.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435127570|gb|ELN14931.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435135145|gb|ELN22255.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435138633|gb|ELN25658.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435140515|gb|ELN27476.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435144413|gb|ELN31254.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435151278|gb|ELN37930.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435157622|gb|ELN44060.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435160071|gb|ELN46380.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435165691|gb|ELN51717.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435170543|gb|ELN56291.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435172029|gb|ELN57574.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435185504|gb|ELN70371.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435186604|gb|ELN71435.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435187842|gb|ELN72585.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435197082|gb|ELN81399.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435203765|gb|ELN87502.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207715|gb|ELN91154.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435213030|gb|ELN95976.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435221905|gb|ELO04043.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435223454|gb|ELO05488.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435228346|gb|ELO09790.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435228532|gb|ELO09963.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435231326|gb|ELO12581.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435239510|gb|ELO19999.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435245687|gb|ELO25716.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435250199|gb|ELO29940.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435252172|gb|ELO31769.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435254829|gb|ELO34212.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435255392|gb|ELO34755.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435266636|gb|ELO45369.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435267214|gb|ELO45926.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435275570|gb|ELO53647.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435276490|gb|ELO54501.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435285285|gb|ELO62687.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435286813|gb|ELO64062.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435291308|gb|ELO68150.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435301824|gb|ELO77823.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435308323|gb|ELO83296.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435309881|gb|ELO84489.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435310200|gb|ELO84733.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435317299|gb|ELO90350.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435322752|gb|ELO94939.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435332289|gb|ELP03249.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|436413419|gb|ELP11353.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436420505|gb|ELP18369.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436422042|gb|ELP19881.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|444853273|gb|ELX78344.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444854083|gb|ELX79149.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444855469|gb|ELX80514.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444862363|gb|ELX87220.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444869064|gb|ELX93666.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444871584|gb|ELX95997.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444876915|gb|ELY01074.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444879324|gb|ELY03427.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444884856|gb|ELY08665.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444891064|gb|ELY14344.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|451910918|gb|AGF82724.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 181
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + ER+AE +EF+K V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|329937943|ref|ZP_08287425.1| oligoribonuclease [Streptomyces griseoaurantiacus M045]
gi|329302900|gb|EGG46789.1| oligoribonuclease [Streptomyces griseoaurantiacus M045]
Length = 200
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI E L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSSDALIEVAALVTDSELNVLGEGVDIVIRPPDEALETMPEVVREMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
+SGL + L SG T +AE++V+ +V+++V L GNSV D FL + MP L
Sbjct: 65 SSGLLSE-LASGTTMADAEERVLAYVREHVKEPRKAPLCGNSVGTDRGFLARDMPSLEEY 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E IF
Sbjct: 124 LHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIF 177
>gi|253690114|ref|YP_003019304.1| Exonuclease RNase T and DNA polymerase III [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756692|gb|ACT14768.1| Exonuclease RNase T and DNA polymerase III [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 180
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ L M +W H
Sbjct: 7 LIWIDLEMTGLNPERDRIIEIATLVTDANLNVLAEGPVLAVHQSDSQLALMDDWNVRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT +V S ER AE + + F++K V + GNS+ D FL +YMP+L + F
Sbjct: 67 ASGLTDRVKASTTDERAAELETLAFLQKWVPAGKSPICGNSIGQDRRFLFRYMPELEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN +
Sbjct: 127 HYRYLDVSTLKELARRWKPEILTGF-KKQGTHQAMDDIRESLAELAYYRENFLR 179
>gi|451936510|ref|YP_007460364.1| oligoribonuclease [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777433|gb|AGF48408.1| oligoribonuclease [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 181
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EM+GL ++ILE+A +ITD L K +EGP + IHQ E L+SM +W ++ H
Sbjct: 8 LVWLDMEMSGLDPSKNKILEVAVVITDENLDKIIEGPVIAIHQNNEVLESMDKWNKSVHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +VL S ++E+EAE ++ F+K ++ L GN++ D F+ YM L + F
Sbjct: 68 KSGLVDRVLSSSVSEKEAENCILLFLKNHINPGKSPLCGNTISQDRRFMSIYMSRLENFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSSIK L RW P Y+ SK+ KH+AL DI +SI EL++Y++ FK
Sbjct: 128 HYRNIDVSSIKELVKRWSPSIYKNF-SKDSKHQALSDIYDSINELRHYRKYFFK 180
>gi|421846103|ref|ZP_16279253.1| oligoribonuclease [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772547|gb|EKS56152.1| oligoribonuclease [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|455644849|gb|EMF23942.1| oligoribonuclease [Citrobacter freundii GTC 09479]
Length = 181
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAE + F+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASTMGDREAELATLAFLKEWVPEGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|424903388|ref|ZP_18326901.1| oligoribonuclease [Burkholderia thailandensis MSMB43]
gi|390931261|gb|EIP88662.1| oligoribonuclease [Burkholderia thailandensis MSMB43]
Length = 203
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 1/182 (0%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P+ ++ LVW+D+EMTGL + DRI+EIA ++T+ L ++EGP L IHQ+ E L M
Sbjct: 13 PVLVRNELNLVWLDMEMTGLSPDTDRIIEIAVVVTNSTLDIALEGPVLAIHQSDETLAKM 72
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
+W +N H SGL +V S +TE +A Q+ F+ + V + GNS+ D F+ +
Sbjct: 73 DDWNKNTHGRSGLIDRVRASSVTEADAAAQIEAFLGQYVPPGKSPMCGNSICQDRRFMAR 132
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
+MP+L F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E
Sbjct: 133 WMPELERFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYRER 191
Query: 242 IF 243
Sbjct: 192 FL 193
>gi|404420747|ref|ZP_11002481.1| oligoribonuclease [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403659698|gb|EJZ14326.1| oligoribonuclease [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 215
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ DR++EIA ++TD L +G D+VIH E L SM + + H
Sbjct: 5 LVWIDCEMTGLDLKSDRLIEIAVLVTDADLNILGDGLDVVIHTDDEALSSMVDVVKQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L
Sbjct: 65 RSGLIEEVRASTVDVATAEEMVLDYIRGHVKTAKAAPLAGNSIATDRGFIARDMPKLDDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI ELKYY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRSTAF 178
>gi|253996722|ref|YP_003048786.1| oligoribonuclease [Methylotenera mobilis JLW8]
gi|253983401|gb|ACT48259.1| Exonuclease RNase T and DNA polymerase III [Methylotenera mobilis
JLW8]
Length = 186
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EM+GL + DR+LE+A ++TD L E P V+HQ+ E LD M W + H
Sbjct: 13 LIWLDMEMSGLLPDSDRVLELAAVVTDADLNVLAESPVFVVHQSDEVLDGMDAWNKGAHG 72
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S L+E EA Q++EF+K +V + + GNS+ D F+ +YMP+L S F
Sbjct: 73 RSGLIDKVKASTLSEAEASAQMIEFLKAHVPSGKSPMCGNSICQDRRFMARYMPELESFF 132
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENI 242
+ +DVS K L RW P Y K +H AL DI ESI ELKYY+E+
Sbjct: 133 HYRNLDVSVFKELARRWKPEIYSGF-KKASRHEALADIYESIDELKYYREHF 183
>gi|374367564|ref|ZP_09625625.1| oligoribonuclease [Cupriavidus basilensis OR16]
gi|373100867|gb|EHP41927.1| oligoribonuclease [Cupriavidus basilensis OR16]
Length = 216
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+EIA ++TD +L EGP LVIHQ LD M W + H
Sbjct: 21 LIWLDMEMTGLMPDTDRIIEIAIVVTDSELNILAEGPVLVIHQEDAVLDGMDNWNKGTHG 80
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S LTE +AE +++ F+K+ V + GNS+ D F+ +YMP L + F
Sbjct: 81 RSGLIDKVKASTLTEAQAEVELLAFLKRWVPAGKSPMCGNSICQDRRFMARYMPKLEAFF 140
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P ++ K Q H AL DI ES+ EL+YY+ + +
Sbjct: 141 HYRNLDVSTLKELCKRWEPAIHKGF-IKRQLHTALADILESVEELRYYRTHFIR 193
>gi|323526920|ref|YP_004229073.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1001]
gi|323383922|gb|ADX56013.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1001]
Length = 203
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Query: 57 QNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
+++Q P M LVW+D+EMTGL + DRI+EIA ++T+ L + VEGP IHQ+ E
Sbjct: 6 ESAQQPPLVRSDMNLVWLDMEMTGLDPDSDRIIEIAVVVTNSTLDRMVEGPVFAIHQSDE 65
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDF 176
L M +W QN H SGL +V S ++E +A + +F+ V + GNS+ D
Sbjct: 66 TLAKMDQWNQNTHGRSGLIDRVKASTVSEADATVLIRDFLGAYVPPGKSPMCGNSICQDR 125
Query: 177 MFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELK 236
F+ ++MP+L + F + +DVS++K LC RW P Y+ K H AL DI ESI ELK
Sbjct: 126 RFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELK 184
Query: 237 YYKENIF 243
YY+E+
Sbjct: 185 YYREHFL 191
>gi|444353581|ref|YP_007389725.1| 3'-to-5' oligoribonuclease (orn) [Enterobacter aerogenes EA1509E]
gi|443904411|emb|CCG32185.1| 3'-to-5' oligoribonuclease (orn) [Enterobacter aerogenes EA1509E]
Length = 181
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + +REAE +EF+K+ V + GNS+ D FL KYMP L + F
Sbjct: 68 GSGLVDRVKASTVGDREAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|398790908|ref|ZP_10551795.1| oligoribonuclease (3'->5' exoribonuclease) [Pantoea sp. YR343]
gi|398217131|gb|EJN03664.1| oligoribonuclease (3'->5' exoribonuclease) [Pantoea sp. YR343]
Length = 182
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP +HQ+ E L M +W H
Sbjct: 9 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILAEGPVFAVHQSDEQLALMDDWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +R AE +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 NSGLVARVKASEHDDRAAELATIEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K H+ALDDIRES+ EL YY+E+ +
Sbjct: 129 HYRYLDVSTLKELARRWKP-DILPGFKKSGSHQALDDIRESVAELAYYREHFLQ 181
>gi|419048432|ref|ZP_13595357.1| oligoribonuclease monomer [Escherichia coli DEC3A]
gi|377887453|gb|EHU51930.1| oligoribonuclease monomer [Escherichia coli DEC3A]
Length = 181
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M W
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDGWNVRTRT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|145593678|ref|YP_001157975.1| oligoribonuclease [Salinispora tropica CNB-440]
gi|145303015|gb|ABP53597.1| Exonuclease, RNase T and DNA polymerase III [Salinispora tropica
CNB-440]
Length = 198
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++E+A ++TD L EG D+VIH + LD M E H
Sbjct: 7 LVWIDCEMTGLDLGGDKLIEVAALVTDPDLNVLGEGVDVVIHADEAALDKMPEIVATMHA 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + EAE+ V++++ +V T L GNS+ D F+ + MP L +
Sbjct: 67 KSGLTEEVRRSTIGLAEAEEMVLDYITSHVKDPRTAPLCGNSIATDRGFIARDMPRLDNH 126
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL D+RESI EL+YY+ +F
Sbjct: 127 LHYRMIDVSSIKELCRRWYPRVYFSQPRKGLAHRALADVRESIRELEYYRRTLF 180
>gi|237785970|ref|YP_002906675.1| oligoribonuclease [Corynebacterium kroppenstedtii DSM 44385]
gi|237758882|gb|ACR18132.1| putative oligoribonuclease [Corynebacterium kroppenstedtii DSM
44385]
Length = 222
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 107/177 (60%), Gaps = 1/177 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL ++EIA I+TD L EG D+VIH T + L M ++ H
Sbjct: 25 IVWIDCEMTGLDPSTHVLVEIAAIVTDANLNILDEGLDIVIHATDDELAKMDDFVTQMHT 84
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASL 189
+GLT ++ S ++ EAE +V+++VKK V T LAGNS+ D F+ YMP L
Sbjct: 85 KNGLTDEIRKSTVSVGEAENEVLDYVKKWVNAPRTAPLAGNSIASDRKFIAAYMPKLDEF 144
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVSSIK L RWYP+ Y+ P K HRAL DI+ESI EL YY+ +F T+
Sbjct: 145 LHYRMIDVSSIKELAHRWYPKVYQNQPKKGLAHRALADIKESIRELDYYRRAVFITD 201
>gi|237798271|ref|ZP_04586732.1| oligoribonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021123|gb|EGI01180.1| oligoribonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 178
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ +AE Q +EF+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTISMADAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWSPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|113968935|ref|YP_732728.1| oligoribonuclease [Shewanella sp. MR-4]
gi|114048927|ref|YP_739477.1| oligoribonuclease [Shewanella sp. MR-7]
gi|123130769|sp|Q0HMP6.1|ORN_SHESM RecName: Full=Oligoribonuclease
gi|123131054|sp|Q0HR35.1|ORN_SHESR RecName: Full=Oligoribonuclease
gi|113883619|gb|ABI37671.1| Exonuclease, RNase T and DNA polymerase III [Shewanella sp. MR-4]
gi|113890369|gb|ABI44420.1| Exonuclease, RNase T and DNA polymerase III [Shewanella sp. MR-7]
Length = 181
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ +VDR++EIA ++TD +L +GP + IHQ+ E L +M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + E +A Q + F+++ V + GNSV D FL +YM +L F
Sbjct: 68 ESGLIDRVRASQVNEAQAVAQTIAFLEQYVPKGASPMCGNSVGQDRRFLNRYMRELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNLDVSTVKELVKRWSPETMAGF-KKQNTHQALQDIQESIAELQYYRSKVFK 180
>gi|374623412|ref|ZP_09695922.1| Exonuclease RNase T and DNA polymerase III [Ectothiorhodospira sp.
PHS-1]
gi|373942523|gb|EHQ53068.1| Exonuclease RNase T and DNA polymerase III [Ectothiorhodospira sp.
PHS-1]
Length = 181
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + D I+EIA I+TD +L EGP + IHQT+E L M +W +N H
Sbjct: 8 LVWIDLEMTGLDPQSDYIIEIATIVTDKELNVLAEGPVIAIHQTEEILSRMDDWNRNTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S E EAE++ + F+K+ V + + GNS+ D FL + MPDL + F
Sbjct: 68 RSGLLDRVKLSLYNEVEAEQETLRFLKQYVPPRSSPMCGNSICQDRRFLFRCMPDLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P + SK+ H+AL DIR+SI EL++Y+E++ K
Sbjct: 128 HYRNLDVSTLKELARRWAPGVLNSL-SKDATHKALQDIRDSITELRHYREHMLKV 181
>gi|157373929|ref|YP_001472529.1| oligoribonuclease [Shewanella sediminis HAW-EB3]
gi|157316303|gb|ABV35401.1| exonuclease, RNase T and DNA polymerase III [Shewanella sediminis
HAW-EB3]
Length = 181
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL VDR++EIA I+TD +L EGP + IHQ++E L M +W Q HH
Sbjct: 8 LIWVDLEMTGLDPSVDRVIEIATIVTDKELNILAEGPVIAIHQSEEQLARMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +E +A + F+ ++ + GNS+ D F+ +YMP+L F
Sbjct: 68 ESGLVDRVRASKYSEEQAVAMTIAFLSQHATKGDSPMCGNSIGQDRRFMNRYMPELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSSIK L RW P + +K+ H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNIDVSSIKELVRRWKP-ELMNGFTKQGTHKALVDIQESIAELQYYRAKVFK 180
>gi|373253024|ref|ZP_09541142.1| oligoribonuclease [Nesterenkonia sp. F]
Length = 219
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 114/178 (64%), Gaps = 4/178 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D +LE+A ++TD +L +G D+VI L+SMG++ + H+
Sbjct: 44 MVWIDCEMTGLDPDSDVLLEVAALVTDTELNILGDGVDVVIRPEDGALESMGDFVRRMHD 103
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
+SGL + L SGLT EA+++V+++V+ V PL AGNSV+ D FL+ MPDL
Sbjct: 104 SSGLLDE-LDSGLTVDEAQRRVLDYVRAWVPEAGVAPL-AGNSVHADKAFLRLAMPDLVD 161
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ ++DVS+IK L RWYP+ P K HRAL DIR+SI EL++Y+ IF+ +
Sbjct: 162 HLHYRIIDVSTIKELASRWYPQARGDAPEKTGNHRALGDIRDSIEELRHYRATIFRRD 219
>gi|409080746|gb|EKM81106.1| hypothetical protein AGABI1DRAFT_84041 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 189
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 59 SQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECL 118
S PL+ PLVWID EMTGL D++LEIA +IT+G L +G VI KE L
Sbjct: 2 SMGPLDLPAG-PLVWIDCEMTGLNPRKDKVLEIAVLITNGNLQIVDDGIQYVIKTKKEVL 60
Query: 119 DSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFM 177
D M EWC H SGLT+ L S T+ Q++ ++K+ V T +LAG+SV+ D
Sbjct: 61 DGMDEWCTKQHGKSGLTRACLDSPYTQEYVASQILNYIKRWVPEPRTGILAGSSVHADRA 120
Query: 178 FLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKY 237
FL + MP++ + +VDVSS+K L RW+P P+ + HRALDDIR SI EL++
Sbjct: 121 FLVEEMPEVVDWLHYRIVDVSSVKELSRRWFPHLPFPKPT-DISHRALDDIRGSIRELEW 179
Query: 238 YKENIF 243
Y+ NIF
Sbjct: 180 YRNNIF 185
>gi|357021874|ref|ZP_09084105.1| oligoribonuclease [Mycobacterium thermoresistibile ATCC 19527]
gi|356479622|gb|EHI12759.1| oligoribonuclease [Mycobacterium thermoresistibile ATCC 19527]
Length = 215
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ DR++EIA ++TD L EG D+VIH E LD+M H
Sbjct: 5 LVWIDCEMTGLDLKSDRLIEIAVLVTDADLNILGEGLDVVIHTDDEALDNMIPVVTEMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL +V S + AE+ V+++V+ +V T LAGNS+ D F+ + MP L
Sbjct: 65 RSGLIDEVRASTIDLATAEEMVLDYVRSHVKQAKTAPLAGNSIATDRGFIARDMPKLDDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELQYYRRTAF 178
>gi|83720885|ref|YP_442207.1| oligoribonuclease [Burkholderia thailandensis E264]
gi|83654710|gb|ABC38773.1| oligoribonuclease [Burkholderia thailandensis E264]
Length = 229
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M +W +N H
Sbjct: 48 LVWLDMEMTGLNPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHG 107
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +TE +A Q+ F+ + V + GNS+ D F+ ++MP+L F
Sbjct: 108 RSGLIDRVRVSSVTEADAAAQIEAFLGQYVPPGKSPMCGNSICQDRRFMARWMPELERFF 167
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E
Sbjct: 168 HYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYRERFL 219
>gi|358637983|dbj|BAL25280.1| oligoribonuclease [Azoarcus sp. KH32C]
Length = 183
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL+ + DRI+E+A +ITD +L E L +HQ LD M +W +N H
Sbjct: 8 LIWLDMEMTGLEPDRDRIIEVAIVITDSQLNTVAEAQVLAVHQPDAVLDGMDDWNKNTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S L E E E +++ F+++ V + T + GNSV D F+ +YMP L + F
Sbjct: 68 KSGLTERVRTSILGEAEVEARMLAFLQEYVPSRTSPMCGNSVCQDRRFMARYMPQLEAWF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P Y+ V K KH AL DI ESI EL++Y++N +
Sbjct: 128 HYRNLDVSTLKELARRWRPEVYQGV-KKAGKHEALSDIYESINELRHYRDNFLR 180
>gi|400536369|ref|ZP_10799904.1| oligoribonuclease [Mycobacterium colombiense CECT 3035]
gi|400330451|gb|EJO87949.1| oligoribonuclease [Mycobacterium colombiense CECT 3035]
Length = 215
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD L EG D+VIH L +MG+ H
Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNVLGEGVDVVIHADDAALAAMGDVVAEMHS 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S + AE V++++ ++V T LAGNS+ D FL + MP L S
Sbjct: 65 RSGLTDEVRASTVDVATAEAMVLDYIGEHVKQPKTAPLAGNSIATDRAFLVRDMPALDSF 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL++Y+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPVKGLAHRALADIHESIRELQFYRRTAF 178
>gi|427826045|ref|ZP_18993107.1| oligoribonuclease [Bordetella bronchiseptica Bbr77]
gi|410591310|emb|CCN06408.1| oligoribonuclease [Bordetella bronchiseptica Bbr77]
Length = 181
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQPDSLLDAMDNWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +KV S L E AE+ ++EF+ ++V L GN++ D F+ YMP+L F
Sbjct: 68 KSGLIEKVKASTLGEAHAEQILLEFLAEHVPAGKSPLCGNTISQDRRFMYAYMPNLERFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELKYY+E++ K
Sbjct: 128 HYRNLDVSTLKELARRWAPAVYKGF-DKKSRHEALADIYESIDELKYYREHLLKV 181
>gi|307544322|ref|YP_003896801.1| oligoribonuclease [Halomonas elongata DSM 2581]
gi|307216346|emb|CBV41616.1| oligoribonuclease [Halomonas elongata DSM 2581]
Length = 197
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E +RI+E+A +ITD L EGP L +HQ L++M +W Q H
Sbjct: 15 LVWIDLEMTGLDPERERIIEVATLITDADLNVVAEGPVLAVHQPDALLEAMDDWNQKTHG 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + EAE++ + F+ ++V T + GNSV+ D FL++ MP+L + F
Sbjct: 75 GSGLTERVRASAIDTAEAERRTLAFLHEHVAPGTSPMCGNSVHQDRRFLEREMPELLAFF 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK H A+DDI+ESI EL +Y+ +
Sbjct: 135 HYRNLDVSTLKELAKRWNPGALVGF-SKRNVHLAMDDIKESIAELAHYRRTFLR 187
>gi|283834783|ref|ZP_06354524.1| oligoribonuclease [Citrobacter youngae ATCC 29220]
gi|291069029|gb|EFE07138.1| oligoribonuclease [Citrobacter youngae ATCC 29220]
Length = 181
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAE + F+++ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASTMGDREAELATLAFLQEWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|441155798|ref|ZP_20966868.1| oligoribonuclease [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440617841|gb|ELQ80929.1| oligoribonuclease [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 202
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI E L +M E + H
Sbjct: 5 MVWIDCEMTGLSLANDALIEVAALVTDSELNVLGDGVDIVIRPPAEALTTMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG--TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
+SGL + L SG T +A++QV++++K++V PL GNSV D FL + MP+L S
Sbjct: 65 SSGLLAE-LDSGTTLEDAQEQVLQYLKQHVPEPGRAPL-CGNSVGTDRGFLLRDMPELES 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 HLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVF 177
>gi|325983556|ref|YP_004295958.1| exonuclease RNase T and DNA polymerase III [Nitrosomonas sp. AL212]
gi|325533075|gb|ADZ27796.1| Exonuclease RNase T and DNA polymerase III [Nitrosomonas sp. AL212]
Length = 181
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+E+A +ITD +L EGP LV+HQ E L+ M +W Q+ H
Sbjct: 8 LIWVDMEMTGLNPDNDRIIEVALVITDSQLNTVAEGPVLVVHQPDEILNGMDKWNQSTHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S L E E E Q+VEF+K +V + + GNS+ D F+ + MP L + F
Sbjct: 68 KSGLIDKVKASTLKEAEVEAQMVEFLKLHVPSGISPMCGNSICQDRRFMVRSMPQLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P SK+ KH AL DI +SI ELK+Y+++ T
Sbjct: 128 HYRNLDVSTLKELAKRWKPEIVANF-SKDSKHEALADIYDSINELKHYRQHFIVT 181
>gi|160872136|ref|ZP_02062268.1| oligoribonuclease Orn [Rickettsiella grylli]
gi|159120935|gb|EDP46273.1| oligoribonuclease Orn [Rickettsiella grylli]
Length = 181
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL D+I+EIA IITD +L EGP I Q++ L M +W + H+
Sbjct: 8 LIWIDLEMTGLDTNQDKIIEIATIITDSQLEIIEEGPVFAIFQSESILTHMDDWNKRQHK 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +TE EAEKQ +EF+ K+V + GNS+ D FL + MP L + F
Sbjct: 68 NSGLLDRVRLSKMTEEEAEKQTLEFIMKHVPPQKSPMCGNSICQDRRFLARCMPVLENYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ KH AL+D+R+SI EL+YY+E++FK
Sbjct: 128 HYRNLDVSTLKELAYRWSP-NLLGAYKKKSKHLALEDVRDSINELRYYREHLFK 180
>gi|336316416|ref|ZP_08571315.1| oligoribonuclease (3'->5' exoribonuclease) [Rheinheimera sp. A13L]
gi|335879285|gb|EGM77185.1| oligoribonuclease (3'->5' exoribonuclease) [Rheinheimera sp. A13L]
Length = 183
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E D ILE+A I+TD +L EGP I KE LD M WC H
Sbjct: 8 LVWIDLEMTGLDPEKDVILEMATIVTDSQLNILAEGPVFAIKTPKEVLDGMDAWCTETHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK+ L S + +A Q + F+ V + GNS+ D FL KY P+ + F
Sbjct: 68 KSGLTKRCLESEVELADAMAQTISFLSDYVPAGKSPMCGNSIGQDRRFLVKYAPEFEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RWYP + K+ K H ALDDIRESI EL YK + FK
Sbjct: 128 HYRNLDVSTVKELARRWYP-EVTKLVKKSSSHLALDDIRESIAELAVYKTHFFK 180
>gi|206579385|ref|YP_002240881.1| oligoribonuclease [Klebsiella pneumoniae 342]
gi|288937537|ref|YP_003441596.1| exonuclease RNase T and DNA polymerase III [Klebsiella variicola
At-22]
gi|206568443|gb|ACI10219.1| oligoribonuclease [Klebsiella pneumoniae 342]
gi|288892246|gb|ADC60564.1| Exonuclease RNase T and DNA polymerase III [Klebsiella variicola
At-22]
Length = 181
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE +EF+K+ V + GNS+ D FL KYMP L + F
Sbjct: 68 GSGLVDRVKASAVSEHDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|365922162|ref|ZP_09446395.1| oligoribonuclease [Cardiobacterium valvarum F0432]
gi|364574840|gb|EHM52279.1| oligoribonuclease [Cardiobacterium valvarum F0432]
Length = 191
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL D ILEIA +ITD +L EGP + IHQ LD + +W + HH
Sbjct: 7 LIWIDLEMTGLDSRHDHILEIATLITDAELNTLAEGPVIAIHQPGSILDHLDDWNRTHHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL + S + AE Q + F+++ V T L GNS+ D F+ + MP L F
Sbjct: 67 ASGLLDRCRASTIDTAAAEAQTLAFIREYVPPQTSPLCGNSICQDRRFMARLMPTLEHYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RWYP P K+ H AL DIRESI EL++Y+ +IFK
Sbjct: 127 HYRNLDVSTLKELVRRWYP--AHSYP-KKSSHEALADIRESIAELRHYRAHIFK 177
>gi|302865700|ref|YP_003834337.1| exonuclease RNase T and DNA polymerase III [Micromonospora
aurantiaca ATCC 27029]
gi|302568559|gb|ADL44761.1| Exonuclease RNase T and DNA polymerase III [Micromonospora
aurantiaca ATCC 27029]
Length = 196
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TD L +G D+VIH E LD M E + H
Sbjct: 5 LVWIDCEMTGLDLRRDALIEVAALVTDPDLNVLGDGVDVVIHADDEALDGMPEIVRTMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE V+++V V T L GNS+ D FL + M L +
Sbjct: 65 KSGLTEEVRLSTVTLAEAEDMVLDYVTSYVKDPRTAPLCGNSIATDRGFLARDMTRLDAH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DIRESI EL+YY+ +F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRVYFGQPQKGLAHRALADIRESIRELEYYRRTVF 178
>gi|335425145|ref|ZP_08554133.1| oligoribonuclease [Salinisphaera shabanensis E1L3A]
gi|334886581|gb|EGM24938.1| oligoribonuclease [Salinisphaera shabanensis E1L3A]
Length = 181
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+EIA ++TD L EGP IHQ LD M W H
Sbjct: 8 LIWIDLEMTGLDPQTDRIIEIATLVTDKDLNVLAEGPVRAIHQDDALLDGMDAWNTRQHN 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+V S + E +A+++ + F+ + V + GNS+ D FL +YMP+L + F
Sbjct: 68 QSGLVKRVRDSSIDEAQAQRETLAFLAEYVPEGASPMCGNSICQDRRFLARYMPELEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K K+ H A+DDIR+S+ EL YY+E + K
Sbjct: 128 HYRHIDVSTLKELAKRWAP-EAAKGFKKQATHLAMDDIRDSLAELAYYRETLLK 180
>gi|290512276|ref|ZP_06551643.1| oligoribonuclease [Klebsiella sp. 1_1_55]
gi|289775271|gb|EFD83272.1| oligoribonuclease [Klebsiella sp. 1_1_55]
Length = 199
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 26 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE +EF+K+ V + GNS+ D FL KYMP L + F
Sbjct: 86 GSGLVDRVKASAVSEHDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|395236522|ref|ZP_10414710.1| oligoribonuclease [Turicella otitidis ATCC 51513]
gi|423350592|ref|ZP_17328245.1| oligoribonuclease [Turicella otitidis ATCC 51513]
gi|394488364|emb|CCI82798.1| oligoribonuclease [Turicella otitidis ATCC 51513]
gi|404387433|gb|EJZ82552.1| oligoribonuclease [Turicella otitidis ATCC 51513]
Length = 210
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + I+E+A ++TD L EG DLV+H + E L M + H
Sbjct: 11 LVWIDLEMTGLDVHRHTIVEVAAVVTDANLEILGEGVDLVVHASDEELAEMDDTVTEMHA 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
+SGLT+++ S T +EAE V+ ++++ P LAGNS+ D F+++ MP L
Sbjct: 71 SSGLTEEIKASTTTLKEAEDAVLALIEEHCDPKHPAPLAGNSIATDRSFIREQMPRLDEA 130
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RW+PR Y+K P K HRAL DI ESI EL YY+ +F
Sbjct: 131 LHYRMVDVSSIKELTRRWFPRAYQKQPPKGLAHRALADIVESIRELDYYRRAVF 184
>gi|83648050|ref|YP_436485.1| oligoribonuclease [Hahella chejuensis KCTC 2396]
gi|123531236|sp|Q2SBB4.1|ORN_HAHCH RecName: Full=Oligoribonuclease
gi|83636093|gb|ABC32060.1| Oligoribonuclease (3'->5' exoribonuclease) [Hahella chejuensis KCTC
2396]
Length = 182
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+E+A ++T L EGP + +HQ L M +W +N H
Sbjct: 7 LIWIDLEMTGLDPDSDRIIEMAVVVTTSNLELVAEGPVIAVHQPDSVLALMDDWNRNTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT +V S + E +AEKQ+++F+ ++V + GNS+ D FL +YM DL F
Sbjct: 67 ASGLTGRVKGSTIGEADAEKQILDFLAQHVDAGCSPMCGNSIGQDRRFLARYMKDLEKFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H+AL+DIRES+ EL+YY+E+ +
Sbjct: 127 HYRNLDVSTLKELARRWRPEVAAGI-KKKGSHQALEDIRESVEELRYYREHFLR 179
>gi|269955883|ref|YP_003325672.1| Exonuclease RNase T and DNA polymerase III [Xylanimonas
cellulosilytica DSM 15894]
gi|269304564|gb|ACZ30114.1| Exonuclease RNase T and DNA polymerase III [Xylanimonas
cellulosilytica DSM 15894]
Length = 212
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 109/175 (62%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL D ++E+A ++TD +L +G D++I L+ MG++ + H
Sbjct: 10 IVWIDCEMTGLDARADALIEVAAVVTDSELNVLDDGIDVLIAPPAAALEGMGDFVRTMHT 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL + L +G T EAE+QV+ ++K+ V PL AGNSV D MFL + MP+L
Sbjct: 70 TSGLLDE-LAAGATLAEAEQQVLAYIKRWVPDAGKAPL-AGNSVGTDKMFLDRDMPELVG 127
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSS+K L RWYPR Y P K+ HRAL DI ESI EL+YY+E +F
Sbjct: 128 HLHYRIIDVSSVKELSRRWYPRAYFSSPKKDGGHRALADILESIDELRYYREAVF 182
>gi|229597251|ref|YP_001908888.2| oligoribonuclease [Erwinia tasmaniensis Et1/99]
Length = 187
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLNPEQDRIIEIATLVTDADLNILAEGPVFAVHQSDAQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE +EF+K+ V + + GNS+ D FL KYMP+L + F
Sbjct: 68 NSGLVERVKASQVDDRAAELATIEFLKQWVPANSSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKP---EILPGFKKQGTHQALDDIRESVAELAYYREHFIQ 180
>gi|319944217|ref|ZP_08018493.1| oligoribonuclease [Lautropia mirabilis ATCC 51599]
gi|319742512|gb|EFV94923.1| oligoribonuclease [Lautropia mirabilis ATCC 51599]
Length = 236
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL ++DRI+E+A ++TD +L EGP L IHQ LD+M +W Q+ H
Sbjct: 57 LVWLDMEMTGLHPDIDRIIEVAMVVTDSELNLLAEGPVLAIHQPDTVLDAMDKWNQSTHG 116
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S LTE A+ ++EF++ + GNS+ D F+ +YMP+L S F
Sbjct: 117 KSGLIDRVRASTLTEAAAQGILLEFIRAWAPEGKSPMCGNSIGQDRRFMARYMPELESWF 176
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P YR K H AL DI+ESI EL++Y+++
Sbjct: 177 HYRNLDVSTLKELARRWAPEVYRSF-KKRGAHTALADIQESIDELRHYRQHFI 228
>gi|209696189|ref|YP_002264119.1| oligoribonuclease [Aliivibrio salmonicida LFI1238]
gi|208010142|emb|CAQ80467.1| oligoribonuclease [Aliivibrio salmonicida LFI1238]
Length = 181
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP + IHQ++ L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDAQLNILAEGPVIAIHQSEGELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S TE A ++ + F++K V + GNS+ D FL K+MP L F
Sbjct: 68 NSGLVARVNASEHTEASAIEETIAFLEKWVPKGVSPICGNSIGQDRRFLYKHMPKLEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS+IK L RW P K H ALDDIRESI ELKYY++NIF
Sbjct: 128 HYRYVDVSTIKELTRRWKPEVLDGF-EKTGTHLALDDIRESIAELKYYRKNIF 179
>gi|146310013|ref|YP_001175087.1| oligoribonuclease [Enterobacter sp. 638]
gi|166918639|sp|A4W5Q6.1|ORN_ENT38 RecName: Full=Oligoribonuclease
gi|145316889|gb|ABP59036.1| Exonuclease, RNase T and DNA polymerase III [Enterobacter sp. 638]
Length = 181
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +REAE +EF+K+ + + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASTQGDREAELATIEFLKQWIPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL +Y+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAFYRENFIK 180
>gi|197334850|ref|YP_002157125.1| oligoribonuclease [Vibrio fischeri MJ11]
gi|423687068|ref|ZP_17661876.1| oligoribonuclease [Vibrio fischeri SR5]
gi|197316340|gb|ACH65787.1| oligoribonuclease [Vibrio fischeri MJ11]
gi|371493827|gb|EHN69427.1| oligoribonuclease [Vibrio fischeri SR5]
Length = 181
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP + IHQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDAQLNILAEGPVIAIHQPEEELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S E A + + F+++ V + GNS+ D FL K+MP L F
Sbjct: 68 NSGLVARVQESKYNEEAAIAETIAFLEQWVPKGVSPICGNSIGQDRRFLYKHMPTLEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS+IK L RW P +K H ALDDIRESI ELKYY+++IF
Sbjct: 128 HYRYVDVSTIKELARRWKPEVLDGF-TKAGTHLALDDIRESIAELKYYRQHIF 179
>gi|238063163|ref|ZP_04607872.1| oligoribonuclease [Micromonospora sp. ATCC 39149]
gi|237884974|gb|EEP73802.1| oligoribonuclease [Micromonospora sp. ATCC 39149]
Length = 198
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TD L +G D+VIH + L++M E + H
Sbjct: 7 LVWIDCEMTGLDLGRDALIEVAALVTDPDLNVLGDGVDVVIHADEAALEAMPEIVRTMHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S +T EAE V+++V +V L GNS+ D F+ + MP L +
Sbjct: 67 KSGLTEEVRRSAVTLAEAEDLVLDYVTSHVKDPRAAPLCGNSIATDRGFISRDMPRLDAH 126
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DIRESI EL+YY+ IF
Sbjct: 127 LHYRMIDVSSIKELCRRWYPRVYFGQPRKGLAHRALADIRESIRELEYYRRTIF 180
>gi|188030133|emb|CAO98019.1| Oligoribonuclease [Erwinia tasmaniensis Et1/99]
Length = 193
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP +HQ+ L M EW H
Sbjct: 14 LIWIDLEMTGLNPEQDRIIEIATLVTDADLNILAEGPVFAVHQSDAQLGLMDEWNVRTHT 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE +EF+K+ V + + GNS+ D FL KYMP+L + F
Sbjct: 74 NSGLVERVKASQVDDRAAELATIEFLKQWVPANSSPICGNSIGQDRRFLFKYMPELEAYF 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 134 HYRYLDVSTLKELARRWKP---EILPGFKKQGTHQALDDIRESVAELAYYREHFIQ 186
>gi|68535589|ref|YP_250294.1| oligoribonuclease [Corynebacterium jeikeium K411]
gi|68263188|emb|CAI36676.1| putative oligoribonuclease [Corynebacterium jeikeium K411]
Length = 210
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 61 TPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDS 120
TP + LVW+D EMTGL + ++EIA I+TD LT EG DLVIH + L
Sbjct: 4 TPNQVAKNDRLVWVDCEMTGLDPDQHVLVEIAVIVTDADLTPLDEGLDLVIHAAERDLAR 63
Query: 121 MGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFL 179
M H SGLT+++ S +T EAE+QV+++VKK+V T LAGN++ D F+
Sbjct: 64 MDAVVTKMHGESGLTEQIRSSDITLEEAEEQVLDYVKKHVPTAGVAPLAGNTIGADRKFI 123
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
+YMP L + ++DVSS+K L RWYP Y P+K HRAL DI+ESI EL YY+
Sbjct: 124 NRYMPHLDQYLHYRMIDVSSLKELARRWYPHVYNGQPAKGMAHRALADIKESIRELDYYR 183
Query: 240 ENIF 243
+
Sbjct: 184 RAML 187
>gi|420368283|ref|ZP_14869045.1| oligoribonuclease [Shigella flexneri 1235-66]
gi|391322408|gb|EIQ79094.1| oligoribonuclease [Shigella flexneri 1235-66]
Length = 181
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAE + F+K+ V + GNSV D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASTMGDREAELATLAFLKEWVPEGKSPICGNSVGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|227495721|ref|ZP_03926032.1| oligoribonuclease [Actinomyces urogenitalis DSM 15434]
gi|226834741|gb|EEH67124.1| oligoribonuclease [Actinomyces urogenitalis DSM 15434]
Length = 206
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL + D ++E+A ++TD +L EG D++I + L+ M ++ + H
Sbjct: 6 PLVWIDCEMTGLDLGKDALIEVAVVVTDYELKPLGEGIDVLIKPPAQALEQMNDFVRQMH 65
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
+SGL + L GLT EA++ V+++VK V T LAGNSV D FL + MP+L
Sbjct: 66 TSSGLLDE-LDGGLTMSEAQRVVLDYVKSLVPQARTAQLAGNSVGTDKTFLARDMPELID 124
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +VDVSSIK L RWYPR Y + P K HRAL DI ESI EL+YY+ +F
Sbjct: 125 YLHYRIVDVSSIKELAKRWYPRTYFQAPEKHGGHRALADILESIDELRYYRAILFPAG 182
>gi|225025590|ref|ZP_03714782.1| hypothetical protein EIKCOROL_02492 [Eikenella corrodens ATCC
23834]
gi|224941628|gb|EEG22837.1| hypothetical protein EIKCOROL_02492 [Eikenella corrodens ATCC
23834]
Length = 238
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L W+D+EMTGL E DRI+E A +ITD L + IHQ+ E L+ M W + HE
Sbjct: 54 LCWLDMEMTGLNPEHDRIIEAAVVITDADLNILAQSESYAIHQSDELLEGMDAWNTSTHE 113
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT++V S L+E E E+++++F+ + + T L GN+V+ D F+++YMP L + F
Sbjct: 114 RTGLTQRVKDSTLSEAEVEQRLLDFIAQWIPQGTSPLCGNTVHQDRRFMQRYMPKLEAWF 173
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW+P Y+ SK+ HRALDDI ESI E ++Y++ +
Sbjct: 174 HYRNLDVSTLKELARRWHPAAYKSF-SKKGSHRALDDILESIEEFRHYRQTFLR 226
>gi|426197660|gb|EKV47587.1| hypothetical protein AGABI2DRAFT_136285 [Agaricus bisporus var.
bisporus H97]
Length = 189
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 59 SQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECL 118
S PL+ PLVWID EMTGL D++LEIA +IT+G L +G VI KE L
Sbjct: 2 SMGPLDLPAG-PLVWIDCEMTGLNPRKDKVLEIAVLITNGNLQIVDDGIQYVIKTKKEVL 60
Query: 119 DSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFM 177
D M EWC H SGLT+ L S T+ Q++ ++K+ V T +LAG+SV+ D
Sbjct: 61 DGMDEWCTKQHGKSGLTRACLDSPYTQEYVASQILNYIKRWVPEPRTGILAGSSVHADRA 120
Query: 178 FLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKY 237
FL + MP++ + +VDVSS+K L RW+P P+ + HRALDDIR SI EL++
Sbjct: 121 FLVEEMPEVIDWLHYRIVDVSSVKELSRRWFPHLPFPKPT-DISHRALDDIRGSIRELEW 179
Query: 238 YKENIF 243
Y+ NIF
Sbjct: 180 YRNNIF 185
>gi|423142832|ref|ZP_17130470.1| exonuclease [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379049423|gb|EHY67318.1| exonuclease [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 181
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQADAQLALMDDWNVRIHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + ER+AE +EF+K V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASAMGERDAELATLEFLKTWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|357399464|ref|YP_004911389.1| oligoribonuclease [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386355505|ref|YP_006053751.1| oligoribonuclease [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337765873|emb|CCB74582.1| Oligoribonuclease [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365806013|gb|AEW94229.1| oligoribonuclease [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 204
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI E L++M E + H
Sbjct: 5 MVWIDCEMTGLSLRHDALIEVAALVTDSELNVLGDGVDIVIKPPAEALETMPEVVRAMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
ASGL + L G T EAE+ V+E+V++ V L GNSV D FL + MP L
Sbjct: 65 ASGLLDE-LPGGTTPAEAEQAVLEYVRQYVKEPRKAPLCGNSVGTDRGFLARDMPALEQH 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 124 LHYRIIDVSSVKELSRRWYPRAYFNAPRKNGNHRALADIRESIAELRYYREAVF 177
>gi|159036666|ref|YP_001535919.1| oligoribonuclease [Salinispora arenicola CNS-205]
gi|157915501|gb|ABV96928.1| Exonuclease RNase T and DNA polymerase III [Salinispora arenicola
CNS-205]
Length = 196
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++E+A ++TD L EG D+VIH + LD M E H
Sbjct: 5 LVWIDCEMTGLDLGSDKLIEVAALVTDPDLNVLGEGVDVVIHADEAALDKMPEIVATMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + EAE ++++V +V T L GNS+ D F+ + MP L +
Sbjct: 65 KSGLTEEVRRSTVGLAEAEDLILDYVTSHVKDPRTAPLCGNSIATDRGFIARDMPRLDNH 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL D+RESI EL+YY+ +F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRVYFSQPQKGLAHRALADVRESIRELEYYRRTLF 178
>gi|415950846|ref|ZP_11557013.1| Oligoribonuclease protein [Herbaspirillum frisingense GSF30]
gi|407757575|gb|EKF67531.1| Oligoribonuclease protein [Herbaspirillum frisingense GSF30]
Length = 176
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 69 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNH 128
M L+W+D+EMTGL + DRI+E+A ++TD +L EGP L +HQ+ E LD M W +
Sbjct: 1 MNLIWVDMEMTGLDPDKDRIIEVAVVVTDAELNILGEGPVLAVHQSDELLDGMDAWNKGT 60
Query: 129 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
H SGL +V S +TE +AE+Q++ F+K+ V + GNS+ D F+ + MP L
Sbjct: 61 HGRSGLIDRVKASTVTEADAEQQIIAFLKQYVPAGKSPMCGNSICQDRRFMVRGMPKLEE 120
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
F + +DVS++K LC RW P + K Q H AL DI ESI ELKYY+E+ K
Sbjct: 121 FFHYRNLDVSTLKELCKRWKP-EIATGFKKRQMHTALADILESIEELKYYREHFIK 175
>gi|365143028|ref|ZP_09348020.1| oligoribonuclease [Klebsiella sp. 4_1_44FAA]
gi|363650525|gb|EHL89615.1| oligoribonuclease [Klebsiella sp. 4_1_44FAA]
Length = 181
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLAVMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE +EF+K+ V + GNS+ D FL KYMP L + F
Sbjct: 68 GSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|254571599|ref|XP_002492909.1| RNA exonuclease, required for U4 snRNA maturation [Komagataella
pastoris GS115]
gi|238032707|emb|CAY70730.1| RNA exonuclease, required for U4 snRNA maturation [Komagataella
pastoris GS115]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 119/209 (56%), Gaps = 1/209 (0%)
Query: 37 KSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIIT 96
+S+ S + N S + N NS+ P + P+VWID EMTGL I D I+EI CIIT
Sbjct: 5 RSLTSLFRRNVSQEVLAPNTANSKLP-SSPLQQPIVWIDCEMTGLDIYNDHIVEICCIIT 63
Query: 97 DGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFV 156
D L EG + VIH + + M EWC HH SGLTKKVL S T + E +++ ++
Sbjct: 64 DQNLEVVDEGYESVIHYDNDVMSKMNEWCIEHHGTSGLTKKVLESTKTLPQVESELLSYI 123
Query: 157 KKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVP 216
+++ T ++AGNS+++D F+ + P + + L+DVS+I +C R P R P
Sbjct: 124 SQHIEPNTGVMAGNSIHMDKFFMYREFPKVIDYLFYRLIDVSTIYEVCKRHNPALLRTAP 183
Query: 217 SKEQKHRALDDIRESIMELKYYKENIFKT 245
K+ H A DI ESI +LK+++ + K+
Sbjct: 184 RKKAAHTAKADILESIQQLKWFQTHYLKS 212
>gi|88855197|ref|ZP_01129862.1| oligoribonuclease [marine actinobacterium PHSC20C1]
gi|88815725|gb|EAR25582.1| oligoribonuclease [marine actinobacterium PHSC20C1]
Length = 206
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 110/174 (63%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL +E+D ++E+A +ITD L EG +VI + + L+ MGE+ H
Sbjct: 8 LVWIDCEMTGLDVEIDELVEVAVVITDYDLVPVDEGMSIVIKPSADALEHMGEFVTQMHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
+SGL ++ L +G++ +AE V E++ K V + LAGN++ D FL KYMP + S
Sbjct: 68 SSGLIEE-LANGVSLADAEFAVNEYIVKYVPNPRSAPLAGNTIGTDRTFLAKYMPRVDSH 126
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSSIK L RW+PR Y PSK+ HRAL DI ESI EL YY++ +F
Sbjct: 127 LHYRSVDVSSIKELSKRWFPRVYFNAPSKDGGHRALADILESIRELDYYRKAVF 180
>gi|372268155|ref|ZP_09504203.1| oligoribonuclease [Alteromonas sp. S89]
Length = 180
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +RI+EIA ++TD +L EGP + IHQ+ L +M +W H
Sbjct: 6 LIWIDLEMTGLDPEKERIIEIATVVTDSRLNVLAEGPVMAIHQSDALLAAMDDWNTEQHG 65
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE++ +EF+ V + GNS+ D FL KYMP L F
Sbjct: 66 GSGLVARVKDSSISEHQAERETIEFLSHWVPEGASPMCGNSIGQDRRFLVKYMPLLEQYF 125
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSS+K L RW P D K H A+DDI +SI ELK+Y+E+ F+
Sbjct: 126 HYRNLDVSSVKELARRWRP-DVLNGVKKTSSHLAMDDIHDSINELKHYREHFFR 178
>gi|29654538|ref|NP_820230.1| oligoribonuclease [Coxiella burnetii RSA 493]
gi|153208846|ref|ZP_01947070.1| oligoribonuclease [Coxiella burnetii 'MSU Goat Q177']
gi|154707040|ref|YP_001424673.1| oligoribonuclease [Coxiella burnetii Dugway 5J108-111]
gi|161829936|ref|YP_001597086.1| oligoribonuclease [Coxiella burnetii RSA 331]
gi|165921448|ref|ZP_02219636.1| oligoribonuclease [Coxiella burnetii Q321]
gi|212212380|ref|YP_002303316.1| oligoribonuclease [Coxiella burnetii CbuG_Q212]
gi|212218651|ref|YP_002305438.1| oligoribonuclease [Coxiella burnetii CbuK_Q154]
gi|37999374|sp|Q83C93.1|ORN_COXBU RecName: Full=Oligoribonuclease
gi|29541805|gb|AAO90744.1| oligoribonuclease [Coxiella burnetii RSA 493]
gi|120575697|gb|EAX32321.1| oligoribonuclease [Coxiella burnetii 'MSU Goat Q177']
gi|154356326|gb|ABS77788.1| oligoribonuclease [Coxiella burnetii Dugway 5J108-111]
gi|161761803|gb|ABX77445.1| oligoribonuclease [Coxiella burnetii RSA 331]
gi|165916763|gb|EDR35367.1| oligoribonuclease [Coxiella burnetii Q321]
gi|212010790|gb|ACJ18171.1| oligoribonuclease [Coxiella burnetii CbuG_Q212]
gi|212012913|gb|ACJ20293.1| oligoribonuclease [Coxiella burnetii CbuK_Q154]
Length = 183
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 108/179 (60%), Gaps = 3/179 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E DRI+EIA I+T+ L EGP IHQ + L +M W +HH
Sbjct: 8 LIWLDLEMTGLDPERDRIIEIATIVTNSHLDILAEGPAFAIHQPDKLLTAMDNWNTSHHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V +S + E EAE + F++K V L GNSV D FL +YMP L F
Sbjct: 68 ASGLLERVKNSSVDEVEAETLTLAFLEKYVSAGKSPLCGNSVCQDRRFLSRYMPRLNQFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 249
+ +DV+++K L RW P+ KE +H AL DIR+SI EL+YY+ ++ NL K
Sbjct: 128 HYRHLDVTTLKILAQRWAPQ-IAAAHIKESQHLALQDIRDSIEELRYYRAHLL--NLSK 183
>gi|336309795|ref|ZP_08564772.1| 3'-to-5' oligoribonuclease (orn) [Shewanella sp. HN-41]
gi|335866789|gb|EGM71752.1| 3'-to-5' oligoribonuclease (orn) [Shewanella sp. HN-41]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ +VDRI+EIA ++TD +L +GP + IHQ+ E L M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPDVDRIIEIATLVTDQELNIIGQGPVIAIHQSDEVLAVMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S E +A + + F+++ V + GNSV D FL +YM +L F
Sbjct: 68 ASGLIERVRASQDNEAQAVAKTIAFLEQYVPKGASPMCGNSVGQDRRFLNRYMRELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P KE H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNLDVSTVKELVRRWSPETMAGF-KKEGTHQALQDIQESIAELQYYRSKVFK 180
>gi|269795775|ref|YP_003315230.1| 5' exoribonuclease [Sanguibacter keddieii DSM 10542]
gi|269097960|gb|ACZ22396.1| oligoribonuclease (3'->5' exoribonuclease) [Sanguibacter keddieii
DSM 10542]
Length = 220
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 112/178 (62%), Gaps = 10/178 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +LT EG D+++ E L+ M ++ ++ H
Sbjct: 10 IVWIDCEMTGLDLGADALVEVAAVVTDSELTVLGEGIDIIVRPPDEALEQMNDFVRDMHT 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP-----LLAGNSVYVDFMFLKKYMPD 185
+SGL + L +G T +AE QV+++++ T+ P L GNSV D MFL++ M D
Sbjct: 70 SSGLIDE-LAAGTTLADAEAQVLDYLR----TFVPEPGKAPLGGNSVATDKMFLERDMKD 124
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
L + + ++DVSSIK L RWYPR Y P+K HRAL DI ESI EL+YY+ +F
Sbjct: 125 LVAHLHYRIIDVSSIKELARRWYPRVYFASPTKNGGHRALADILESIDELRYYRSALF 182
>gi|261254064|ref|ZP_05946637.1| oligoribonuclease [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954991|ref|ZP_12598018.1| oligoribonuclease [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260937455|gb|EEX93444.1| oligoribonuclease [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814205|gb|EGU49154.1| oligoribonuclease [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +++EIA I+TD +L EGP L IHQ L M EWC H
Sbjct: 8 LIWIDLEMTGLDPETHKVIEIATIVTDSELNILAEGPVLAIHQPDAELKKMDEWCTTTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + E+EA +Q +EF++K V + GNSV D FL K+M +L F
Sbjct: 68 GSGLVDRVRKSNIDEQEAVRQTIEFLEKWVPKGKSPICGNSVGQDRRFLYKHMAELEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P +K+ H ALDDIRESI EL+YY++ I
Sbjct: 128 HYRYIDVSTLKELTRRWKPEVLGGF-TKQGSHLALDDIRESIAELQYYRKTII 179
>gi|398832391|ref|ZP_10590550.1| oligoribonuclease (3'->5' exoribonuclease) [Herbaspirillum sp.
YR522]
gi|398223167|gb|EJN09517.1| oligoribonuclease (3'->5' exoribonuclease) [Herbaspirillum sp.
YR522]
Length = 197
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL + DRI+E+A ++TD +L +GP +V+HQ+ E LD M W + H
Sbjct: 24 LVWVDMEMTGLDPDHDRIIEVAVVVTDSQLNVIGQGPVIVVHQSDELLDGMDAWNKGTHG 83
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +TE EAE +VEF++K V + GNS+ D F+ + MP L F
Sbjct: 84 RSGLIDRVKASTVTEAEAEAVLVEFLRKYVPAGKSPMCGNSICQDRRFMVRGMPKLEEFF 143
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P + K Q H AL DI ESI ELKYY+E+ K
Sbjct: 144 HYRNLDVSTLKELCKRWKP-ELASGFKKRQMHTALADILESIEELKYYREHFIK 196
>gi|433649051|ref|YP_007294053.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium smegmatis
JS623]
gi|433298828|gb|AGB24648.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium smegmatis
JS623]
Length = 215
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ DR++EIA ++TD L EG D+VIH L SM + H
Sbjct: 5 LVWIDCEMTGLDLKTDRLIEIAVLVTDADLNILGEGIDVVIHAEDAALSSMIPVVTDMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++V S + AE+QV+++++ +V T LAGNS+ D F+ + MP L
Sbjct: 65 RSGLIEEVRASTVDLGTAEEQVLDYIRTHVKQAKTAPLAGNSIATDRGFIARDMPKLDDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELQYYRRTAF 178
>gi|309812148|ref|ZP_07705906.1| oligoribonuclease [Dermacoccus sp. Ellin185]
gi|308433835|gb|EFP57709.1| oligoribonuclease [Dermacoccus sp. Ellin185]
Length = 209
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL +E D ++E+A ++TD +L + +G D+VI L+ MG++ ++ H
Sbjct: 15 IVWIDCEMTGLDLENDALIEVAALVTDFELNQLGDGVDVVIKPEPAALEQMGDFVRDMHT 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL + L G++ EA+ V+E+V ++ PL GN+V D FL++ MP LA
Sbjct: 75 KSGLLAE-LDEGVSMEEAQALVLEYVMRHAPEAGKAPL-GGNTVSTDRGFLERDMPQLAG 132
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSSIK L RWYPR Y P+K HRAL DIRESI EL+YY+E +F
Sbjct: 133 HLHYRTIDVSSIKELSRRWYPRAYFNAPAKHGGHRALADIRESIAELRYYREAVF 187
>gi|441213052|ref|ZP_20975620.1| oligoribonuclease [Mycobacterium smegmatis MKD8]
gi|440625949|gb|ELQ87792.1| oligoribonuclease [Mycobacterium smegmatis MKD8]
Length = 209
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ D ++EIA ++TD L +G D+VIH E L SM + + H
Sbjct: 5 LVWIDCEMTGLDLKSDLLIEIAVLVTDADLNILGDGLDVVIHADDESLSSMVDVVKQMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L
Sbjct: 65 RSGLTEEVRRSTVDLATAEEMVLDYIRGHVKQAKTAPLAGNSIATDRGFIARDMPKLDDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI ELKYY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRATAF 178
>gi|293604208|ref|ZP_06686616.1| oligoribonuclease [Achromobacter piechaudii ATCC 43553]
gi|292817433|gb|EFF76506.1| oligoribonuclease [Achromobacter piechaudii ATCC 43553]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LVIHQ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVIHQPDTLLDAMDNWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S ++E +AE ++ F+ ++V L GN++ D F+ YMP L F
Sbjct: 68 KSGLIDKVRASTVSESQAEDTLLAFLAQHVPAGKSPLCGNTISQDRRFMFAYMPRLEQFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELKYY+EN+ K
Sbjct: 128 HYRNLDVSTLKELARRWAPAVYKGF-EKKSRHEALADIYESIDELKYYRENLLKV 181
>gi|117919043|ref|YP_868235.1| oligoribonuclease [Shewanella sp. ANA-3]
gi|166216589|sp|A0KSR0.1|ORN_SHESA RecName: Full=Oligoribonuclease
gi|117611375|gb|ABK46829.1| Exonuclease, RNase T and DNA polymerase III [Shewanella sp. ANA-3]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ +VDR++EIA ++TD +L +GP + IHQ+ + L +M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDDVLAAMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + E +A Q + F+++ V + GNSV D FL +YM +L F
Sbjct: 68 ESGLIDRVRASQMNEAQAVAQTIAFLEQYVPKGASPMCGNSVGQDRRFLNRYMRELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNLDVSTVKELVKRWSPETMAGF-KKQNTHQALQDIQESIAELQYYRSKVFK 180
>gi|424935458|ref|ZP_18353830.1| Oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|407809645|gb|EKF80896.1| Oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 199
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 26 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE +EF+K+ V + GNS+ D FL KYMP L + F
Sbjct: 86 GSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|262045407|ref|ZP_06018430.1| oligoribonuclease [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|330003307|ref|ZP_08304578.1| oligoribonuclease [Klebsiella sp. MS 92-3]
gi|378976565|ref|YP_005224706.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|386032750|ref|YP_005952663.1| oligoribonuclease [Klebsiella pneumoniae KCTC 2242]
gi|419975910|ref|ZP_14491315.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419980560|ref|ZP_14495844.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419987003|ref|ZP_14502129.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419992447|ref|ZP_14507403.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419999014|ref|ZP_14513795.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420003718|ref|ZP_14518362.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420011558|ref|ZP_14526003.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420015695|ref|ZP_14529994.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420021129|ref|ZP_14535312.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420027440|ref|ZP_14541433.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420033301|ref|ZP_14547107.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420038005|ref|ZP_14551655.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420044004|ref|ZP_14557488.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420049722|ref|ZP_14563028.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420055316|ref|ZP_14568484.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420060063|ref|ZP_14573066.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420067110|ref|ZP_14579906.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420071751|ref|ZP_14584395.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420077852|ref|ZP_14590314.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420082393|ref|ZP_14594691.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421908958|ref|ZP_16338785.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421916593|ref|ZP_16346165.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424828555|ref|ZP_18253283.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|425078754|ref|ZP_18481857.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425079494|ref|ZP_18482591.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425089386|ref|ZP_18492479.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425094316|ref|ZP_18497399.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428151777|ref|ZP_18999485.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428933279|ref|ZP_19006836.1| oligoribonuclease [Klebsiella pneumoniae JHCK1]
gi|428936583|ref|ZP_19009977.1| oligoribonuclease [Klebsiella pneumoniae JHCK1]
gi|428938603|ref|ZP_19011728.1| oligoribonuclease [Klebsiella pneumoniae VA360]
gi|428942042|ref|ZP_19015060.1| oligoribonuclease [Klebsiella pneumoniae VA360]
gi|449059422|ref|ZP_21737118.1| oligoribonuclease [Klebsiella pneumoniae hvKP1]
gi|259037236|gb|EEW38484.1| oligoribonuclease [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328537018|gb|EGF63306.1| oligoribonuclease [Klebsiella sp. MS 92-3]
gi|339759878|gb|AEJ96098.1| oligoribonuclease [Klebsiella pneumoniae KCTC 2242]
gi|364515976|gb|AEW59104.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397341958|gb|EJJ35128.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397345758|gb|EJJ38879.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397346083|gb|EJJ39201.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397359094|gb|EJJ51798.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397361118|gb|EJJ53786.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397369021|gb|EJJ61625.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397375231|gb|EJJ67529.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397376229|gb|EJJ68495.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397387212|gb|EJJ79255.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397393491|gb|EJJ85249.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397395285|gb|EJJ86995.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397404684|gb|EJJ96177.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397412809|gb|EJK04037.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397412952|gb|EJK04175.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397421988|gb|EJK12979.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397428828|gb|EJK19558.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397434793|gb|EJK25426.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397440077|gb|EJK30499.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397445441|gb|EJK35683.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397452290|gb|EJK42362.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|405589555|gb|EKB63120.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405599827|gb|EKB73002.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405608006|gb|EKB80958.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405609948|gb|EKB82785.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|410117159|emb|CCM81410.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410121098|emb|CCM88790.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414705963|emb|CCN27667.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|426298044|gb|EKV60482.1| oligoribonuclease [Klebsiella pneumoniae JHCK1]
gi|426299399|gb|EKV61738.1| oligoribonuclease [Klebsiella pneumoniae VA360]
gi|426305479|gb|EKV67601.1| oligoribonuclease [Klebsiella pneumoniae VA360]
gi|426305645|gb|EKV67763.1| oligoribonuclease [Klebsiella pneumoniae JHCK1]
gi|427538305|emb|CCM95623.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|448874839|gb|EMB09870.1| oligoribonuclease [Klebsiella pneumoniae hvKP1]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE +EF+K+ V + GNS+ D FL KYMP L + F
Sbjct: 68 GSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|290477090|ref|YP_003470002.1| oligoribonuclease [Xenorhabdus bovienii SS-2004]
gi|289176435|emb|CBJ83244.1| oligoribonuclease [Xenorhabdus bovienii SS-2004]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ E DRI+EIA I+TD +L EGP + ++Q E L M +W H
Sbjct: 8 LIWIDLEMTGLEPERDRIIEIATIVTDSELNILAEGPVIAVYQPDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S + EAEK + F+++ V + GNSV D FL +YMP+L F
Sbjct: 68 ASGLVERVKQSQFGDAEAEKATIAFLEQWVPAGKSPICGNSVGQDRRFLFRYMPELEKYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK+ H+ALDDIRESI EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEMLSGF-SKKNTHQALDDIRESIAELVYYREHFIQ 180
>gi|238756168|ref|ZP_04617488.1| Oligoribonuclease [Yersinia ruckeri ATCC 29473]
gi|238705642|gb|EEP98039.1| Oligoribonuclease [Yersinia ruckeri ATCC 29473]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++ +AE Q + F+++ V + GNSV D FL +YMP L + F
Sbjct: 68 GSGLVERVKASPFSDSDAEMQTIAFLEQWVPAGKSPICGNSVGQDRRFLFRYMPALEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKP---EILPGFKKQNTHQALDDIRESVAELAYYREHFIQ 180
>gi|312882822|ref|ZP_07742555.1| oligoribonuclease [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369514|gb|EFP97033.1| oligoribonuclease [Vibrio caribbenthicus ATCC BAA-2122]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E +I+EIA I+TD +L EGP L IHQ + L M +WC N H
Sbjct: 8 LIWIDLEMTGLDPEEHKIIEIATIVTDRELNILAEGPVLAIHQPEVELAKMDDWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S ++E A Q ++F++K V + GNSV D FL K+MP L F
Sbjct: 68 ASGLVERVQSSAISEHSAVSQTIDFLEKWVPKGASPICGNSVGQDRRFLYKHMPKLEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P SK H ALDDIRESI EL+YY++++
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKAGTHLALDDIRESIAELRYYRKHVM 179
>gi|237729098|ref|ZP_04559579.1| oligoribonuclease [Citrobacter sp. 30_2]
gi|226908827|gb|EEH94745.1| oligoribonuclease [Citrobacter sp. 30_2]
Length = 185
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 12 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAE + F+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 72 GSGLVERVKASTMGDREAELATLAFLKEWVPEGKSPICGNSIGQDRRFLFKYMPELEAYF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+
Sbjct: 132 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFI 183
>gi|365104313|ref|ZP_09333974.1| oligoribonuclease [Citrobacter freundii 4_7_47CFAA]
gi|363644926|gb|EHL84207.1| oligoribonuclease [Citrobacter freundii 4_7_47CFAA]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +REAE + F+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVERVKASTMGDREAELATLAFLKEWVPQGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYREHFI 179
>gi|238026568|ref|YP_002910799.1| oligoribonuclease [Burkholderia glumae BGR1]
gi|237875762|gb|ACR28095.1| Oligoribonuclease [Burkholderia glumae BGR1]
Length = 202
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL + DRI+EIA ++T+ L K+VEGP L IHQ+ E L M W Q+ H
Sbjct: 20 LVWLDMEMTGLNPDSDRIIEIAVVVTNSTLDKAVEGPVLAIHQSDETLAKMDAWNQSTHG 79
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E A Q+ F+ + V + GNS+ D F+ ++MP+L F
Sbjct: 80 RSGLIDRVRASTVSEAAAAAQIEAFLAQYVSPGKSPMCGNSICQDRRFMARWMPELERFF 139
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E+
Sbjct: 140 HYRNLDVSTLKELCRRWQPAVYKGF-QKRAMHTALADIHESIDELKYYREHFL 191
>gi|126172800|ref|YP_001048949.1| oligoribonuclease [Shewanella baltica OS155]
gi|153002280|ref|YP_001367961.1| oligoribonuclease [Shewanella baltica OS185]
gi|160877004|ref|YP_001556320.1| oligoribonuclease [Shewanella baltica OS195]
gi|373948044|ref|ZP_09608005.1| Oligoribonuclease [Shewanella baltica OS183]
gi|378710218|ref|YP_005275112.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS678]
gi|386326110|ref|YP_006022227.1| oligoribonuclease [Shewanella baltica BA175]
gi|386339571|ref|YP_006035937.1| oligoribonuclease [Shewanella baltica OS117]
gi|418022336|ref|ZP_12661323.1| Oligoribonuclease [Shewanella baltica OS625]
gi|166216585|sp|A3D017.1|ORN_SHEB5 RecName: Full=Oligoribonuclease
gi|166216586|sp|A6WSV9.1|ORN_SHEB8 RecName: Full=Oligoribonuclease
gi|125996005|gb|ABN60080.1| Exonuclease, RNase T and DNA polymerase III [Shewanella baltica
OS155]
gi|151366898|gb|ABS09898.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS185]
gi|160862526|gb|ABX51060.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS195]
gi|315269207|gb|ADT96060.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS678]
gi|333820255|gb|AEG12921.1| Oligoribonuclease [Shewanella baltica BA175]
gi|334861972|gb|AEH12443.1| Oligoribonuclease [Shewanella baltica OS117]
gi|353538561|gb|EHC08116.1| Oligoribonuclease [Shewanella baltica OS625]
gi|373884644|gb|EHQ13536.1| Oligoribonuclease [Shewanella baltica OS183]
Length = 181
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ +VDRI+EIA ++TD +L +GP + IHQ+ + L +M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPDVDRIIEIATLVTDQELNIIGQGPVIAIHQSDDVLAAMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S TE +A + + F+++ V + GNS+ D FL +YM +L F
Sbjct: 68 ESGLIDRVRASQETEAQAVAKTIAFLEQYVPKGASPMCGNSIGQDRRFLNRYMRELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+IK L RW P K+ H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNVDVSTIKELVKRWSPETMAGF-KKQNTHQALQDIQESIAELQYYRSKVFK 180
>gi|284030055|ref|YP_003379986.1| Exonuclease RNase T and DNA polymerase III [Kribbella flavida DSM
17836]
gi|283809348|gb|ADB31187.1| Exonuclease RNase T and DNA polymerase III [Kribbella flavida DSM
17836]
Length = 202
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TD +L EG DLVI L+ MG++ ++ H
Sbjct: 5 LVWIDCEMTGLDLAADALIEVAVLVTDYELNVLGEGIDLVIAPPPAALEQMGQFVRDMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL + L +G+ EAE+QV++F+ V LAGNSV D FL + MP + +
Sbjct: 65 GSGLLDE-LATGIPLAEAEQQVLDFITGYVKEPRKAALAGNSVGTDRTFLVRDMPKVEAH 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSSIK L RWYPR Y P+K HRAL DI ESI EL+YY++ +F
Sbjct: 124 LHYRNVDVSSIKELVRRWYPRVYYATPAKTGNHRALADITESIAELRYYRQTVF 177
>gi|402782842|ref|YP_006638388.1| 3'-to-5' oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402543689|gb|AFQ67838.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 181
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPAIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE +EF+K+ V + GNS+ D FL KYMP L + F
Sbjct: 68 GSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|429210443|ref|ZP_19201610.1| oligoribonuclease [Pseudomonas sp. M1]
gi|428159217|gb|EKX05763.1| oligoribonuclease [Pseudomonas sp. M1]
Length = 180
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD +L EGP + +HQ++E L M EW H
Sbjct: 7 LIWIDLEMTGLDPDRDVIIEMATIVTDSELNILAEGPVIAVHQSEETLAGMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + +AE + F++K V + GNS+ D FL +YMP L + F
Sbjct: 67 QSGLTQRVRESTIDATQAEAMTLAFLEKWVPKRASPICGNSICQDRRFLYRYMPKLEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ R K H ALDDIRESI EL+YY+E K
Sbjct: 127 HYRNLDVSTLKELAARWAPQ-VRDGFKKGNTHLALDDIRESIAELRYYRETFIK 179
>gi|384228537|ref|YP_005620272.1| oligoribonuclease [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539470|gb|AEO08337.1| oligoribonuclease [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 183
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL ++ RI+EIA +ITD L EGP + I+Q ++ + M +W H
Sbjct: 8 LIWIDLEMTGLNPKIHRIIEIATLITDNLLNIIAEGPVISIYQKEKYMLRMDQWNTITHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL +V +S E +AE + + F+KK V + + GNS+ D +FL KYMP L + F
Sbjct: 68 ENGLITRVKNSIYNETKAELETIVFLKKWVPIQSSPMCGNSITQDRIFLLKYMPTLENYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P+ + K+ HRAL+DIRESI+EL +YK N FK N
Sbjct: 128 HYRNIDVSTLKELAYRWNPKILKNF-QKKNVHRALEDIRESILELNFYKNNFFKKN 182
>gi|292489630|ref|YP_003532520.1| oligoribonuclease [Erwinia amylovora CFBP1430]
gi|428786601|ref|ZP_19004079.1| oligoribonuclease [Erwinia amylovora ACW56400]
gi|291555067|emb|CBA23161.1| oligoribonuclease [Erwinia amylovora CFBP1430]
gi|312173806|emb|CBX82060.1| oligoribonuclease [Erwinia amylovora ATCC BAA-2158]
gi|426274870|gb|EKV52610.1| oligoribonuclease [Erwinia amylovora ACW56400]
Length = 193
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP +HQ+ L M EW H
Sbjct: 14 LIWIDLEMTGLDPERDRIIEIATLVTDADLNILAEGPVFAVHQSDAQLGLMDEWNVRTHT 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE +EF+++ V + + GNS+ D FL KYMP L + F
Sbjct: 74 NSGLVERVKASQVDDRAAELATIEFLQQWVPANSSPICGNSIGQDRRFLFKYMPQLEAYF 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 134 HYRYLDVSTLKELARRWKP-DILAGFKKQGTHQALDDIRESVAELAYYREHFIQ 186
>gi|238892647|ref|YP_002917381.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238544963|dbj|BAH61314.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 199
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 26 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPAIAVHQSDAQLALMDEWNVRTHT 85
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE +EF+K+ V + GNS+ D FL KYMP L + F
Sbjct: 86 GSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 145
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 146 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 198
>gi|333894627|ref|YP_004468502.1| oligoribonuclease [Alteromonas sp. SN2]
gi|332994645|gb|AEF04700.1| oligoribonuclease [Alteromonas sp. SN2]
Length = 181
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL E ++EIA I+TD +L EGP + +HQ + LD+M EWC H
Sbjct: 8 LVWIDMEMTGLDPETCVVMEIATIVTDAQLNVLAEGPVIAVHQPDDVLDNMDEWCTRVHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT + S + E EA +Q + F+ V L GN++ D F+ KYMP+L F
Sbjct: 68 ETGLTARCRASSVNEAEAARQTMAFLSDYVDAGKSPLCGNTIGQDRRFMVKYMPELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSS+K L RW P K+ H ALDDIRESI E++YY+E +F
Sbjct: 128 HYRSIDVSSVKELIKRWKPEVLDGF-DKKGVHLALDDIRESIEEMRYYREKVF 179
>gi|422387924|ref|ZP_16468035.1| oligoribonuclease [Propionibacterium acnes HL096PA2]
gi|422393845|ref|ZP_16473895.1| oligoribonuclease [Propionibacterium acnes HL099PA1]
gi|422425414|ref|ZP_16502348.1| exonuclease [Propionibacterium acnes HL043PA1]
gi|422438823|ref|ZP_16515661.1| exonuclease [Propionibacterium acnes HL092PA1]
gi|422462507|ref|ZP_16539129.1| exonuclease [Propionibacterium acnes HL038PA1]
gi|422474264|ref|ZP_16550733.1| exonuclease [Propionibacterium acnes HL056PA1]
gi|422477154|ref|ZP_16553587.1| exonuclease [Propionibacterium acnes HL007PA1]
gi|422486171|ref|ZP_16562528.1| exonuclease [Propionibacterium acnes HL043PA2]
gi|422492090|ref|ZP_16568400.1| exonuclease [Propionibacterium acnes HL086PA1]
gi|422516679|ref|ZP_16592787.1| exonuclease [Propionibacterium acnes HL110PA2]
gi|422517173|ref|ZP_16593273.1| exonuclease [Propionibacterium acnes HL074PA1]
gi|422521355|ref|ZP_16597387.1| exonuclease [Propionibacterium acnes HL045PA1]
gi|422522825|ref|ZP_16598846.1| exonuclease [Propionibacterium acnes HL053PA2]
gi|422525572|ref|ZP_16601573.1| exonuclease [Propionibacterium acnes HL083PA1]
gi|422528787|ref|ZP_16604762.1| exonuclease [Propionibacterium acnes HL053PA1]
gi|422530397|ref|ZP_16606356.1| exonuclease [Propionibacterium acnes HL110PA1]
gi|422536580|ref|ZP_16612483.1| exonuclease [Propionibacterium acnes HL078PA1]
gi|422544622|ref|ZP_16620460.1| exonuclease [Propionibacterium acnes HL082PA1]
gi|422560478|ref|ZP_16636168.1| exonuclease [Propionibacterium acnes HL005PA1]
gi|313773620|gb|EFS39586.1| exonuclease [Propionibacterium acnes HL074PA1]
gi|313793857|gb|EFS41881.1| exonuclease [Propionibacterium acnes HL110PA1]
gi|313801249|gb|EFS42500.1| exonuclease [Propionibacterium acnes HL110PA2]
gi|313811456|gb|EFS49170.1| exonuclease [Propionibacterium acnes HL083PA1]
gi|313831196|gb|EFS68910.1| exonuclease [Propionibacterium acnes HL007PA1]
gi|313834219|gb|EFS71933.1| exonuclease [Propionibacterium acnes HL056PA1]
gi|313840029|gb|EFS77743.1| exonuclease [Propionibacterium acnes HL086PA1]
gi|314963788|gb|EFT07888.1| exonuclease [Propionibacterium acnes HL082PA1]
gi|314974073|gb|EFT18169.1| exonuclease [Propionibacterium acnes HL053PA1]
gi|314976638|gb|EFT20733.1| exonuclease [Propionibacterium acnes HL045PA1]
gi|314984301|gb|EFT28393.1| exonuclease [Propionibacterium acnes HL005PA1]
gi|315079637|gb|EFT51630.1| exonuclease [Propionibacterium acnes HL053PA2]
gi|315081132|gb|EFT53108.1| exonuclease [Propionibacterium acnes HL078PA1]
gi|315095417|gb|EFT67393.1| exonuclease [Propionibacterium acnes HL038PA1]
gi|327328524|gb|EGE70286.1| oligoribonuclease [Propionibacterium acnes HL096PA2]
gi|327444311|gb|EGE90965.1| exonuclease [Propionibacterium acnes HL043PA2]
gi|327444807|gb|EGE91461.1| exonuclease [Propionibacterium acnes HL043PA1]
gi|327452117|gb|EGE98771.1| exonuclease [Propionibacterium acnes HL092PA1]
gi|328759959|gb|EGF73543.1| oligoribonuclease [Propionibacterium acnes HL099PA1]
Length = 202
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 109/175 (62%), Gaps = 10/175 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TDG+L EG D++I + LD M ++ +N H
Sbjct: 2 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 61
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-----LAGNSVYVDFMFLKKYMPD 185
SGL + L GLT +A+ QV+++++ TY P LAGN++ D FL K MP
Sbjct: 62 TSGLLAE-LDKGLTMAQAQDQVLDYIR----TYVPQAGKAPLAGNTIGTDRSFLAKDMPK 116
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
LAS + VDVSSIK L RWYPR + P K+ HRAL DI+ESI EL Y++E
Sbjct: 117 LASYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWRE 171
>gi|205355112|ref|YP_002228913.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205274893|emb|CAR39959.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
Length = 181
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + ER+AE +EF+K V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+ +DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQTMDDIRESVAELAYYREHFIK 180
>gi|453049431|gb|EME97025.1| oligoribonuclease [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 201
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 107/178 (60%), Gaps = 10/178 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI E L +M E + H
Sbjct: 5 MVWIDCEMTGLSLSTDALIEVAALVTDSELNILGDGVDIVIRPPAEALTTMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP-----LLAGNSVYVDFMFLKKYMPD 185
ASGL + L G T EAE+QV+ ++++ Y P L GNSV D FL + MP+
Sbjct: 65 ASGLLDE-LDGGTTLEEAERQVLAYIRE----YVPEPGKAPLCGNSVGTDRGFLLRDMPE 119
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
L + +VDVSS+K L RW+PR Y P K HRAL DIRESI EL+YY+E IF
Sbjct: 120 LEKHLHYRIVDVSSVKELSRRWFPRAYFASPKKAGNHRALADIRESIAELRYYREAIF 177
>gi|290462053|gb|ADD24074.1| Oligoribonuclease, mitochondrial [Lepeophtheirus salmonis]
Length = 188
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 2/178 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL +EVD ++E+A IITD L + EG ++VIHQ LD+M + + HE
Sbjct: 11 IVWIDCEMTGLDLEVDVLMEVAVIITDKNLKPTKEGLNIVIHQPDSVLDAMTGFPKESHE 70
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY--TPLLAGNSVYVDFMFLKKYMPDLAS 188
+GLT S + ++AE + F+K+ GT PLLAGNSV D FL+KYMP +
Sbjct: 71 KTGLTAACRMSKIDVKQAENDICNFIKRECGTTFGRPLLAGNSVGFDAKFLRKYMPSVTD 130
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ + ++DVS+I W + P K + HRALDDI ESI ++K +K +FK N
Sbjct: 131 ILHYRIIDVSTIHECYNLWDREKLKFCPKKRKTHRALDDILESIEQMKVFKRIMFKQN 188
>gi|238020295|ref|ZP_04600721.1| hypothetical protein GCWU000324_00173 [Kingella oralis ATCC 51147]
gi|237867275|gb|EEP68281.1| hypothetical protein GCWU000324_00173 [Kingella oralis ATCC 51147]
Length = 192
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L W+D+EMTGL E D+I+E+A IITD L + IHQ+ E +D+M EWC H
Sbjct: 7 LCWLDMEMTGLNPETDKIIEVAMIITDKDLNVLAQSEVFAIHQSDEIMDNMDEWCTTTHA 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT +V S E E E+++++F+ + + + GN+++ D F+ KYMP L + F
Sbjct: 67 RTGLTARVKASSYNEAEVEQKLLDFMGEWLPAKASPMCGNTIHQDRRFMVKYMPRLEAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW+P Y+ V K+ H+ALDDI ESI ELKYY++ +
Sbjct: 127 HYRNLDVSTLKELARRWHPAVYKGV-VKKGSHKALDDILESIDELKYYRDTFLR 179
>gi|295131162|ref|YP_003581825.1| Oligoribonuclease [Propionibacterium acnes SK137]
gi|291377019|gb|ADE00874.1| Oligoribonuclease [Propionibacterium acnes SK137]
gi|456738740|gb|EMF63307.1| oligoribonuclease [Propionibacterium acnes FZ1/2/0]
Length = 205
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 109/175 (62%), Gaps = 10/175 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TDG+L EG D++I + LD M ++ +N H
Sbjct: 5 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-----LAGNSVYVDFMFLKKYMPD 185
SGL + L GLT +A+ QV+++++ TY P LAGN++ D FL K MP
Sbjct: 65 TSGLLAE-LDKGLTMAQAQDQVLDYIR----TYVPQAGKAPLAGNTIGTDRSFLAKDMPK 119
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
LAS + VDVSSIK L RWYPR + P K+ HRAL DI+ESI EL Y++E
Sbjct: 120 LASYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWRE 174
>gi|292898154|ref|YP_003537523.1| oligoribonuclease [Erwinia amylovora ATCC 49946]
gi|291198002|emb|CBJ45104.1| oligoribonuclease [Erwinia amylovora ATCC 49946]
Length = 187
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDADLNILAEGPVFAVHQSDAQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE +EF+++ V + + GNS+ D FL KYMP L + F
Sbjct: 68 NSGLVERVKASQVDDRAAELATIEFLQQWVPANSSPICGNSIGQDRRFLFKYMPQLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKP-DILAGFKKQGTHQALDDIRESVAELAYYREHFIQ 180
>gi|302551620|ref|ZP_07303962.1| oligoribonuclease [Streptomyces viridochromogenes DSM 40736]
gi|302469238|gb|EFL32331.1| oligoribonuclease [Streptomyces viridochromogenes DSM 40736]
Length = 200
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDRALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T R+AE+QV+ +V++ V PL GNSV D FL + MP L
Sbjct: 65 ASGLLAE-LPDGTTLRDAEEQVLTYVREFVKEPGKAPL-CGNSVGTDRGFLLRDMPTLED 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 YLHYRIVDVSSIKELARRWYPRAYFNSPQKNGNHRALADIRESIAELRYYREALF 177
>gi|294629494|ref|ZP_06708054.1| oligoribonuclease [Streptomyces sp. e14]
gi|292832827|gb|EFF91176.1| oligoribonuclease [Streptomyces sp. e14]
Length = 202
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T ++AE+QV+ +V+++V PL GNSV D FL + MP L
Sbjct: 65 ASGLLAE-LPGGTTLKDAEEQVLAYVREHVKEPGKAPL-CGNSVGTDRGFLLRDMPVLEG 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 YLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVF 177
>gi|292493403|ref|YP_003528842.1| exonuclease RNase T and DNA polymerase III [Nitrosococcus
halophilus Nc4]
gi|291581998|gb|ADE16455.1| Exonuclease RNase T and DNA polymerase III [Nitrosococcus
halophilus Nc4]
Length = 183
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 103/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEM+GL D ILEIA ++TD L EGP IHQ LD+M EW H
Sbjct: 8 LIWLDLEMSGLDTTQDVILEIATVVTDSDLNIIEEGPVFAIHQNDAILDNMDEWNTRQHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V HS + E AE++ +EF+ ++ + L GNS+ D FL +YMP L +
Sbjct: 68 KSGLVERVRHSLIDEATAEQRTLEFLGQHTHANSSPLCGNSICQDRRFLARYMPQLEAYL 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSSIK L RW P + K KE H AL DIRESI EL YY+ + F+
Sbjct: 128 HYRNLDVSSIKELAKRWAP-EVAKGFKKESAHLALADIRESIEELAYYRAHFFR 180
>gi|399909446|ref|ZP_10777998.1| oligoribonuclease [Halomonas sp. KM-1]
Length = 194
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E +RI+E+A +ITD +L EGP + +H L +M +W Q H
Sbjct: 12 LVWIDLEMTGLDPERERIIEVATLITDNELNLVAEGPVIAVHHPDSLLAAMDDWNQKTHG 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + EAE+Q +EF++ V + + GNSV+ D FL++ MP+L F
Sbjct: 72 ESGLVERVKQSRIDTAEAERQTLEFLRAYVAPGSSPMCGNSVHQDRRFLEREMPELLGFF 131
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK H+ALDDIRES+ EL +Y+ +
Sbjct: 132 HYRNLDVSTLKELAKRWNPGALAGF-SKRNTHQALDDIRESLAELAHYRNTFLR 184
>gi|399116009|emb|CCG18813.1| oligoribonuclease [Taylorella asinigenitalis 14/45]
Length = 181
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D+EMTGL ++DRILE+A IIT+ L+ E P VIHQ L+SM W + H
Sbjct: 8 MVWLDMEMTGLNPDIDRILEVAVIITEDDLSVVAEAPVYVIHQDDALLNSMDNWNTSTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S L E + E+ +++F KK++ T L GNSV D F+ KYMP L
Sbjct: 68 KSGLVAKVKESKLNEAQVEEALLDFFKKHIPEGTVPLCGNSVNQDRRFMFKYMPRLEKYL 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+ K L RW P D K K+ KH AL DI ESI ELK+Y+E+ K
Sbjct: 128 HYRTVDVSTFKELAKRWKP-DVYKAFKKKSKHEALADIYESIEELKHYREHFIK 180
>gi|399019634|ref|ZP_10721780.1| oligoribonuclease (3'->5' exoribonuclease) [Herbaspirillum sp.
CF444]
gi|398097525|gb|EJL87829.1| oligoribonuclease (3'->5' exoribonuclease) [Herbaspirillum sp.
CF444]
Length = 201
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 49 SNLTLENQQNSQTPLEFEYKMP-------LVWIDLEMTGLKIEVDRILEIACIITDGKLT 101
S T N N+ P Y +P L+W+D+EMTGL + DRI+E+A ++TD +L
Sbjct: 2 SQATDANVANAGAP---SYTIPARPNEFNLIWVDMEMTGLDPDNDRIIEVAVVVTDPELN 58
Query: 102 KSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG 161
EGP IHQ E LD M W + H SGL ++V S +TE EA ++ F+K V
Sbjct: 59 VLAEGPVFAIHQPDEILDGMDAWNKGTHGRSGLIERVKASTVTEEEASAALIAFLKPFVP 118
Query: 162 TYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQK 221
+ GNS+ D F+ + MP L + F + +DVS++K LC RW P K QK
Sbjct: 119 VGKSPMCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGF-KKHQK 177
Query: 222 HRALDDIRESIMELKYYKENIFK 244
H AL DI ESI ELKYY+E+ K
Sbjct: 178 HTALADIIESIEELKYYREHFIK 200
>gi|365828145|ref|ZP_09369975.1| hypothetical protein HMPREF0975_01758 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365264139|gb|EHM93952.1| hypothetical protein HMPREF0975_01758 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 203
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL++ D ++E+A ++TD +L EG D++I + L+ MG++ +N H
Sbjct: 6 PLVWIDCEMTGLELSTDALIEVAVVVTDYELKPLAEGIDVLIRPPADALERMGDYVRNMH 65
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
+SGL + L GLT A K V+++V V + LAGNSV D FL + MP+L
Sbjct: 66 TSSGLLTE-LEGGLTMEAARKTVLDYVTSLVPEPRSAQLAGNSVGTDKAFLARDMPELIE 124
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR + P K HRAL DI ESI EL+YY+ +F
Sbjct: 125 HLHYRIVDVSSLKELAKRWYPRTFFHAPKKAGGHRALADILESIDELRYYRAVLF 179
>gi|343425701|emb|CBQ69235.1| related to REX2-Oligoribonuclease, mitochondrial precursor
[Sporisorium reilianum SRZ2]
Length = 220
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 110/186 (59%), Gaps = 11/186 (5%)
Query: 68 KMPLVWIDLEMTGLKIEV-DRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQ 126
K PLVWID EMTGL IE DR+LEIACI+TDG L +G VI K+ LD+M WC
Sbjct: 24 KGPLVWIDCEMTGLDIERGDRLLEIACIVTDGDLNPVDDGVSYVISTPKDVLDNMNAWCI 83
Query: 127 NHHEASGLTKKVL---HSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKY 182
N H +GLT L HS + V+ +++ V T LAGN+V+ D +FL +
Sbjct: 84 NQHALTGLTAACLSPTHS-VPHATVRAAVLAYIRDRVPTPNAACLAGNTVHADKVFLVRE 142
Query: 183 MPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKE-----QKHRALDDIRESIMELKY 237
MP+L + +VDVSSIK L RWY D P KE HRAL+DIR SI EL++
Sbjct: 143 MPELIHHLHYRIVDVSSIKELVRRWYGADKTWRPRKEGDAKKGDHRALNDIRASIDELRW 202
Query: 238 YKENIF 243
Y++++F
Sbjct: 203 YRQHVF 208
>gi|345015357|ref|YP_004817711.1| oligoribonuclease [Streptomyces violaceusniger Tu 4113]
gi|344041706|gb|AEM87431.1| Oligoribonuclease [Streptomyces violaceusniger Tu 4113]
Length = 202
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+V+ E L +M E ++ H
Sbjct: 5 MVWIDCEMTGLSLANDALIEVAALVTDSELNIQGEGVDIVVRPPAEALVTMPEVVRDMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL + L G T +A+ QV+ +++K+V PL GNSV D FL + MP L S
Sbjct: 65 TSGLLAE-LEGGTTLEDAQDQVLAYIRKHVPEAGKAPL-CGNSVGTDRGFLLRDMPTLES 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DI ESI EL+YY+E IF
Sbjct: 123 YLHYRIVDVSSIKELARRWYPRAYFNSPKKNGNHRALADIHESIAELRYYREAIF 177
>gi|407984476|ref|ZP_11165093.1| oligoribonuclease [Mycobacterium hassiacum DSM 44199]
gi|407373969|gb|EKF22968.1| oligoribonuclease [Mycobacterium hassiacum DSM 44199]
Length = 230
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ DR++EIA ++TD L +G D+VIH +E L SM + ++ H
Sbjct: 5 LVWIDCEMTGLDLKRDRLIEIAVLVTDADLNILGDGIDVVIHADEEALSSMIDVVKDMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L
Sbjct: 65 RSGLIEEVRASTVDVATAEEMVLDYIRTHVKQAKTAPLAGNSIATDRGFIARDMPRLDDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL++Y+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELEFYRRTAF 178
>gi|417930275|ref|ZP_12573654.1| oligoribonuclease [Propionibacterium acnes SK182]
gi|340772402|gb|EGR94906.1| oligoribonuclease [Propionibacterium acnes SK182]
Length = 223
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 109/175 (62%), Gaps = 10/175 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TDG+L EG D++I + LD M ++ +N H
Sbjct: 23 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 82
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-----LAGNSVYVDFMFLKKYMPD 185
SGL + L GLT +A+ QV+++++ TY P LAGN++ D FL K MP
Sbjct: 83 TSGLLAE-LDKGLTMAQAQDQVLDYIR----TYVPQAGKAPLAGNTIGTDRSFLAKDMPK 137
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
LAS + VDVSSIK L RWYPR + P K+ HRAL DI+ESI EL Y++E
Sbjct: 138 LASYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWRE 192
>gi|71891864|ref|YP_277593.1| oligoribonuclease [Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71795970|gb|AAZ40721.1| oligoribonuclease [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 187
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRILEIA ++TD KL EGP + IHQ++ L M +W H
Sbjct: 6 LIWIDLEMTGLNPEWDRILEIATLVTDSKLNILSEGPVISIHQSESQLLLMDDWNTRVHS 65
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GL +KV S L E A ++F++ VG + GNS+ D +FL +YMP+L S F
Sbjct: 66 ATGLIEKVRCSTLDETSASNLTIKFLRNWVGFKKSPICGNSIAQDRLFLFRYMPELESYF 125
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+H +DVS+IK L +RW P D ++ H ALDDIRES+ EL YY+++ +
Sbjct: 126 NHRYLDVSTIKELMVRWRP-DLISGLRLQKTHCALDDIRESVSELMYYRKHFIQ 178
>gi|94676725|ref|YP_589014.1| oligoribonuclease [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|172046199|sp|Q1LSQ0.1|ORN_BAUCH RecName: Full=Oligoribonuclease
gi|94219875|gb|ABF14034.1| oligoribonuclease [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 184
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRILEIA +ITD L EGP L IHQ++E L M W H
Sbjct: 7 LIWIDLEMTGLNPEQDRILEIATLITDANLNIIAEGPVLAIHQSEEQLKLMNTWNIRIHT 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GL +KV S L E A Q + F+++ V + GNS+ D FL +YMP L S F
Sbjct: 67 ANGLIEKVRKSTLNEETAAAQTIAFLQEWVPAGKSPICGNSISQDRRFLYRYMPILESYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+++ L RW P+ + K+ H+ALDDIRES+ EL YY+ +
Sbjct: 127 HYRCLDVSTLQELARRWKPKIMAGI-KKKNSHKALDDIRESVAELVYYRAHFL 178
>gi|420154093|ref|ZP_14661019.1| oligoribonuclease [Actinomyces massiliensis F0489]
gi|394755816|gb|EJF38995.1| oligoribonuclease [Actinomyces massiliensis F0489]
Length = 206
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL + D ++E+A ++TD L +G D++I L+ MG++ ++ H
Sbjct: 6 PLVWIDCEMTGLDLSADALIEVAAVVTDYDLKPLGKGIDVLIRPPAAALEQMGDFVRDMH 65
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
+SGL + L +GLT EA+ V+++V+ V T LAGNSV D FL + MP+L
Sbjct: 66 TSSGLLDE-LGNGLTMAEAQHAVLDYVRSLVPQPRTAQLAGNSVGTDKAFLVRDMPELVD 124
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +VDVSSIK L RWYPR + P K HRAL DI ESI EL+YY+E +F
Sbjct: 125 YLHYRVVDVSSIKELAKRWYPRTFFHSPEKHGGHRALADILESIDELRYYREVLFPAG 182
>gi|398803671|ref|ZP_10562689.1| oligoribonuclease (3'->5' exoribonuclease) [Polaromonas sp. CF318]
gi|398095924|gb|EJL86255.1| oligoribonuclease (3'->5' exoribonuclease) [Polaromonas sp. CF318]
Length = 187
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL E +R++EIA I+T +LT +EGP L IHQT E LD M W + H
Sbjct: 15 LVWLDCEMTGLDPEKERLIEIAVIVTGPQLTPRIEGPVLAIHQTDELLDQMDAWNKGTHG 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S + E +AE Q++ F+ + V + L GN++ D FL KYMP L +
Sbjct: 75 RSGLIDKVKASTVDEADAEAQILAFLAQYVPKGSSPLCGNTISQDRRFLVKYMPRLEAFL 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+ K L RW P Y K Q H AL D+ ESI EL++Y+E+ K
Sbjct: 135 HYRNVDVSTFKELAKRWRPEVYSAF-KKRQSHTALADVHESIDELEHYREHFLK 187
>gi|254516802|ref|ZP_05128860.1| oligoribonuclease [gamma proteobacterium NOR5-3]
gi|219674307|gb|EED30675.1| oligoribonuclease [gamma proteobacterium NOR5-3]
Length = 184
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL E DR++EIA I+TD L EGP + IHQ+ L +M EW HH
Sbjct: 7 LVWVDLEMTGLVPETDRVIEIATIVTDSDLNTLAEGPVIAIHQSDATLAAMDEWNTTHHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL +V S + E+EA + +EF+K V + GNS+ D F+ +++P+L F
Sbjct: 67 SSGLCDRVRASTIDEQEAARLTIEFLKDWVPAGASPMCGNSICQDRRFMARHLPELERYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P D K H AL+DIR+SI EL++YKE+ +
Sbjct: 127 HYRNLDVSTLKILAQRWRP-DVAASLQKRAVHLALEDIRDSIEELRHYKEHFLNCD 181
>gi|120610573|ref|YP_970251.1| oligoribonuclease [Acidovorax citrulli AAC00-1]
gi|166215745|sp|A1TND9.1|ORN_ACIAC RecName: Full=Oligoribonuclease
gi|120589037|gb|ABM32477.1| Exonuclease, RNase T and DNA polymerase III [Acidovorax citrulli
AAC00-1]
Length = 193
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
VW+D EMTGL E DR+LEIA ++T +L VEGP IHQ+ LD M W + H
Sbjct: 20 FVWLDCEMTGLDPEKDRLLEIAVVVTGPELEPRVEGPVFAIHQSDALLDGMDAWNKGTHG 79
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +KV S +TE EAE+ ++EF+ + V + GNS+ D FL +YMP L + F
Sbjct: 80 RSGLIEKVRASTVTEAEAEQAILEFLARYVRKGVAPMCGNSIGQDRRFLVRYMPKLEAFF 139
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P Y K QKH AL D+ ESI EL +Y++++
Sbjct: 140 HYRNVDVSTLKELSRRWKPEVYASF-KKAQKHTALADVHESIEELAHYRKHLL 191
>gi|326318064|ref|YP_004235736.1| exonuclease RNase T and DNA polymerase III [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323374900|gb|ADX47169.1| Exonuclease RNase T and DNA polymerase III [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 193
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
VW+D EMTGL E DR+LEIA ++T +L VEGP IHQ+ LD M W + H
Sbjct: 20 FVWLDCEMTGLDPEKDRLLEIAVVVTGPELEPRVEGPVFAIHQSDALLDGMDAWNKGTHG 79
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +KV S +TE EAE+ ++EF+ + V + GNS+ D FL +YMP L + F
Sbjct: 80 RSGLIEKVRASTVTEAEAEQAILEFLARYVRKGVAPMCGNSIGQDRRFLVRYMPKLEAFF 139
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS++K L RW P Y K QKH AL D+ ESI EL +Y++++
Sbjct: 140 HYRNVDVSTLKELSRRWKPEVYASF-KKAQKHTALADVHESIEELAHYRKHLL 191
>gi|301063709|ref|ZP_07204220.1| exonuclease [delta proteobacterium NaphS2]
gi|300442182|gb|EFK06436.1| exonuclease [delta proteobacterium NaphS2]
Length = 177
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL E I+EIA I+TD L+ EGPD+VIHQ + L +M W HH+
Sbjct: 5 LVWIDLEMTGLDPEHHVIVEIASIVTDDHLSVLAEGPDIVIHQPESTLSAMEPWSLEHHQ 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++ S + +AE++ + F+++ L GNS+ D FL K+MP L + F
Sbjct: 65 ASGLLDRIKTSVYSTEQAEEETLSFIRQFCQRGHSPLCGNSICQDRRFLVKHMPTLEAFF 124
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVP--SKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSS+K L RWYP +P K++ H AL DI+ESI E++YY++ IF
Sbjct: 125 HYRNIDVSSVKELVKRWYP----NLPHFEKQKTHLALSDIKESIGEMQYYRKQIF 175
>gi|348590121|ref|YP_004874583.1| 3'-to-5' oligoribonuclease [Taylorella asinigenitalis MCE3]
gi|347974025|gb|AEP36560.1| 3'-to-5' oligoribonuclease (orn) [Taylorella asinigenitalis MCE3]
Length = 181
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D+EMTGL ++DRILE+A IIT+ L+ E P VIHQ L+SM W + H
Sbjct: 8 MVWLDMEMTGLNPDIDRILEVAVIITEDDLSVVAEAPVYVIHQDDALLNSMDNWNTSTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S L E + E+ +++F KK++ T L GNSV D F+ KYMP L
Sbjct: 68 KSGLVAKVKDSKLNEAQVEEALLDFFKKHIPEGTVPLCGNSVNQDRRFMFKYMPRLEKYL 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+ K L RW P D K K+ KH AL DI ESI ELK+Y+E+ K
Sbjct: 128 HYRTVDVSTFKELAKRWKP-DVYKAFKKKSKHEALADIYESIEELKHYREHFIK 180
>gi|444921419|ref|ZP_21241255.1| Oligoribonuclease [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507457|gb|ELV07633.1| Oligoribonuclease [Wohlfahrtiimonas chitiniclastica SH04]
Length = 180
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L W+DLEMTGL+ +D I+EIA I+TD L EGP + IHQ + LD M +W Q H
Sbjct: 7 LFWVDLEMTGLEENLDHIIEIASIVTDSDLNVVAEGPVIAIHQPDDVLDLMDDWNQKTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S ++ EAE+ EF++ + + L GNS+ D FLK+YMP +
Sbjct: 67 ESGLIERVRESNISLAEAEEMTYEFLRLWIAKGSSPLCGNSIGTDRRFLKRYMPHIDQYL 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ VDVSS K + RWYP + K+ H+ALDDIRESI ELK+Y+ + + +
Sbjct: 127 HYRNVDVSSFKEMIKRWYPDG--AMYEKQNTHKALDDIRESIGELKFYRTHYLQQH 180
>gi|431931159|ref|YP_007244205.1| oligoribonuclease [Thioflavicoccus mobilis 8321]
gi|431829462|gb|AGA90575.1| oligoribonuclease (3'->5' exoribonuclease) [Thioflavicoccus mobilis
8321]
Length = 181
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DR+LEIA ++TD L EGP + IH+ + L + +W + HH
Sbjct: 8 LIWIDLEMTGLDPDRDRVLEIATLVTDNDLNTIAEGPAIAIHRPEHVLAGLDDWNRRHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S E AE++ +EF+ ++V + GNS+ D FL ++MP L + F
Sbjct: 68 DSGLLDRVRTSTWEEGAAEQETLEFLVQHVPAGKSPMCGNSICQDRRFLARWMPRLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D + KE +H ALDDIRESI EL++Y+ + +
Sbjct: 128 HYRNLDVSTLKILAQRWAP-DVAESVKKESRHLALDDIRESIAELRHYRAQLLQ 180
>gi|334143347|ref|YP_004536503.1| oligoribonuclease [Thioalkalimicrobium cyclicum ALM1]
gi|333964258|gb|AEG31024.1| Oligoribonuclease [Thioalkalimicrobium cyclicum ALM1]
Length = 181
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL+ + +EIA ++TD L EGP + I + L M WCQ H
Sbjct: 7 LVWIDLEMTGLEPGFHKTIEIATVVTDANLNLLAEGPVMAIATPEAELAKMDAWCQKTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT +V S +T EAE+ VEF+ + V + GNS+ D FL MP+L + F
Sbjct: 67 ASGLTARVQASKVTLAEAEQATVEFLSQFVSKGQSPMCGNSICQDRRFLAVDMPNLEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSSIK L RWYP Y K+ H ALDDI ESI EL+YY+E +F
Sbjct: 127 HYRNLDVSSIKELAKRWYPSIYSGF-KKKNAHLALDDIYESIAELRYYREQLF 178
>gi|410091829|ref|ZP_11288377.1| oligoribonuclease [Pseudomonas viridiflava UASWS0038]
gi|409760843|gb|EKN45960.1| oligoribonuclease [Pseudomonas viridiflava UASWS0038]
Length = 177
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP L IHQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVLAIHQSDETLARMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S +T +AE Q + F+ + V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTVTMADAEAQTLAFIMQWVPERSSPICGNSICQDRRFLYRHMPTLE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
F + +DVS++K L RW P + K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 HYFHYRNLDVSTLKELAARWSPNLKFQ---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|59712936|ref|YP_205712.1| oligoribonuclease [Vibrio fischeri ES114]
gi|81310874|sp|Q5E2C2.1|ORN_VIBF1 RecName: Full=Oligoribonuclease
gi|59481037|gb|AAW86824.1| oligoribonuclease [Vibrio fischeri ES114]
Length = 181
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E +I+EIA I+TD +L EGP + IHQ +E L M WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDAQLNILAEGPVIAIHQPEEELAKMDNWCTNTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S E A + + F+++ V + GNS+ D FL K+MP L F
Sbjct: 68 NSGLVARVQESKYDEEAAIAETIAFLEQWVPKGVSPICGNSIGQDRRFLYKHMPRLEEYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVS+IK L RW P +K H ALDDIRESI ELKYY+++IF
Sbjct: 128 HYRYVDVSTIKELARRWKPEVLDGF-TKAGTHLALDDIRESIAELKYYRQHIF 179
>gi|217974867|ref|YP_002359618.1| oligoribonuclease [Shewanella baltica OS223]
gi|217500002|gb|ACK48195.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS223]
Length = 181
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ +VDRI+EIA ++TD +L +GP + IHQ+ + L +M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPDVDRIIEIATLVTDQELNIIGQGPVIAIHQSDDVLAAMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S TE +A + + F+++ V + GNS+ D FL +YM +L F
Sbjct: 68 ESGLIDRVRASQETEAQAVAKTIAFLEQYVPKGASPMCGNSIGQDRRFLNRYMRELEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+IK L RW P K+ H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNVDVSTIKELVKRWSPETMVGF-KKQNTHQALQDIQESIAELQYYRSKVFK 180
>gi|296270642|ref|YP_003653274.1| exonuclease RNase T and DNA polymerase III [Thermobispora bispora
DSM 43833]
gi|296093429|gb|ADG89381.1| Exonuclease RNase T and DNA polymerase III [Thermobispora bispora
DSM 43833]
Length = 198
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 107/176 (60%), Gaps = 4/176 (2%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL + D ++E+ACI+TDG+L EG +VI E L+ M + + H
Sbjct: 4 PLVWIDCEMTGLDLTRDALVEVACIVTDGELNPVDEGVAVVIKPPPETLEQMSDVVREMH 63
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLA 187
ASGL + L G+T EAE V+ +++ +V PL GNS+ D FL + MP +
Sbjct: 64 TASGLLDE-LAGGVTLAEAEATVLGYIRSHVPEAKKAPL-CGNSIATDRAFLARDMPLVD 121
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ + +VDVS+IK L RWYPR Y P K+ HRAL DI ESI EL+YY+ IF
Sbjct: 122 AYLHYRMVDVSTIKELARRWYPRVYFASPEKQGGHRALADITESIRELRYYRAAIF 177
>gi|443492066|ref|YP_007370213.1| oligoribonuclease Orn [Mycobacterium liflandii 128FXT]
gi|442584563|gb|AGC63706.1| oligoribonuclease Orn [Mycobacterium liflandii 128FXT]
Length = 222
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD L +G D+VIH L SM + + H
Sbjct: 12 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVIHADDAALSSMVDVVADMHS 71
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE V++++ ++V T LAGNS+ D F+ + MP L +
Sbjct: 72 RSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPETAPLAGNSIATDRSFIARDMPALDAF 131
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 132 LHYRMIDVSSIKELCRRWYPRIYFGQPPKGLAHRALADIHESIRELQYYRRTAF 185
>gi|118464888|ref|YP_880896.1| oligoribonuclease [Mycobacterium avium 104]
gi|254774490|ref|ZP_05216006.1| oligoribonuclease [Mycobacterium avium subsp. avium ATCC 25291]
gi|166216267|sp|A0QDA8.1|ORN_MYCA1 RecName: Full=Oligoribonuclease
gi|118166175|gb|ABK67072.1| oligoribonuclease [Mycobacterium avium 104]
Length = 215
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD +L +G D+VIH L +MGE H
Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDAELNVLGDGVDVVIHADDAALAAMGEVVTEMHS 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL +V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L S
Sbjct: 65 RSGLIDEVKASTVDLATAEEMVLDYIRTHVKAPKTAPLAGNSIATDRAFIVRDMPALDSY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL++Y+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPVKGLTHRALADIHESIRELQFYRRTAF 178
>gi|146329636|ref|YP_001209796.1| oligoribonuclease [Dichelobacter nodosus VCS1703A]
gi|166216257|sp|A5EY84.1|ORN_DICNV RecName: Full=Oligoribonuclease
gi|146233106|gb|ABQ14084.1| oligoribonuclease [Dichelobacter nodosus VCS1703A]
Length = 180
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL + D I+EIA I+TD +L EGP + ++Q + L M W Q HH
Sbjct: 7 LVWIDLEMTGLDPQHDEIIEIATIVTDAQLNILAEGPVIAVYQPEPILAQMDAWNQKHHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S EAE Q + F+++ + GNS+ D FL + MP L + F
Sbjct: 67 ASGLIERVRQSSFNTLEAEAQTLSFLEQYSEKGRSPICGNSICQDRRFLSRLMPRLEAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RWYP Y K H+AL DIR+SI EL++Y++ IF
Sbjct: 127 HYRNLDVSTIKELVARWYPEHYFH---KNTTHQALQDIRDSIDELRHYRQRIF 176
>gi|398785730|ref|ZP_10548626.1| oligoribonuclease [Streptomyces auratus AGR0001]
gi|396994203|gb|EJJ05249.1| oligoribonuclease [Streptomyces auratus AGR0001]
Length = 202
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI E L +M E + H
Sbjct: 1 MVWIDCEMTGLSLANDALIEVAALVTDSELNVLGDGVDVVIRPPAESLGTMPEVVRQMHT 60
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG--TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL ++ L G T AE QV+ ++K++V PL GNSV D FL + MP L S
Sbjct: 61 ASGLLEE-LDGGTTLEAAEAQVLAYIKQHVPEPGKAPL-CGNSVGTDRGFLLRDMPTLES 118
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RW+PR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 119 YLHYRIVDVSSVKELARRWFPRAYFNSPDKNGNHRALADIRESIAELRYYREAVF 173
>gi|422300344|ref|ZP_16387864.1| oligoribonuclease [Pseudomonas avellanae BPIC 631]
gi|407987501|gb|EKG30291.1| oligoribonuclease [Pseudomonas avellanae BPIC 631]
Length = 178
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++M L
Sbjct: 64 QHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMSALE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NWFHYRNLDVSTLKELAARWAPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|134094115|ref|YP_001099190.1| oligoribonuclease [Herminiimonas arsenicoxydans]
gi|133738018|emb|CAL61063.1| oligoribonuclease [Herminiimonas arsenicoxydans]
Length = 198
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 112/183 (61%), Gaps = 5/183 (2%)
Query: 62 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 121
P EF LVW+D+EMTGL + D I+EIA ++TD +L EGP IHQ+ E LD M
Sbjct: 20 PNEFN----LVWLDMEMTGLDCDNDCIIEIAVVVTDAELNIIGEGPVFAIHQSDETLDKM 75
Query: 122 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 181
W + H SGL ++V S ++E +AE++++EF+KK V + GNS+ D F+ +
Sbjct: 76 DAWNKGTHGRSGLIERVKASTVSEAQAEEELIEFLKKYVPKGKSPMCGNSICQDRRFMAR 135
Query: 182 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 241
MP L + F + +DVS++K LC RW P + K QKH AL DI ESI EL+YY+E+
Sbjct: 136 GMPKLEAFFHYRNLDVSTLKELCKRWKP-ELASGFKKHQKHTALADIIESIEELRYYREH 194
Query: 242 IFK 244
K
Sbjct: 195 FIK 197
>gi|422587784|ref|ZP_16662454.1| oligoribonuclease [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330873800|gb|EGH07949.1| oligoribonuclease [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 178
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++M L
Sbjct: 64 QHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMSALE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWAPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|297559543|ref|YP_003678517.1| exonuclease RNase T and DNA polymerase III [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296843991|gb|ADH66011.1| Exonuclease RNase T and DNA polymerase III [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 216
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL E D ++E+AC+ITDG+L EG D+VI + LD MG++ ++ H
Sbjct: 5 LVWIDCEMTGLDFERDALIEVACLITDGELNILDEGVDVVIRPPQAALDRMGDFVRDMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++ L G++ +EAE V+E +++ V L GNS+ D FL + M +
Sbjct: 65 TSGLLEE-LDKGVSLQEAEDLVLEHIRRYVTEPRKAPLCGNSIATDRTFLARDMKRIDEF 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 124 LHYRMVDVSSIKELLRRWYPRVYYASPEKNGGHRALADITESIHELRYYRAAAF 177
>gi|28872064|ref|NP_794683.1| oligoribonuclease [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967916|ref|ZP_03396062.1| oligoribonuclease [Pseudomonas syringae pv. tomato T1]
gi|301384436|ref|ZP_07232854.1| oligoribonuclease [Pseudomonas syringae pv. tomato Max13]
gi|302132276|ref|ZP_07258266.1| oligoribonuclease [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422656124|ref|ZP_16718571.1| oligoribonuclease [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|37999378|sp|Q87VI6.1|ORN_PSESM RecName: Full=Oligoribonuclease
gi|28855317|gb|AAO58378.1| oligoribonuclease [Pseudomonas syringae pv. tomato str. DC3000]
gi|213927259|gb|EEB60808.1| oligoribonuclease [Pseudomonas syringae pv. tomato T1]
gi|331014602|gb|EGH94658.1| oligoribonuclease [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 178
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW
Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTR 63
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGLT++V S ++ +AE Q + F+K V + + GNS+ D FL ++MP L
Sbjct: 64 QHGGSGLTQRVRESTISMADAEAQTLAFIKLWVPERSSPICGNSICQDRRFLYRHMPALE 123
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P K K H ALDDIRESI EL++Y+E+ K
Sbjct: 124 NYFHYRNLDVSTLKELAARWAPELKFK---KGSTHLALDDIRESIAELRFYREHFIK 177
>gi|375110842|ref|ZP_09757058.1| oligoribonuclease [Alishewanella jeotgali KCTC 22429]
gi|397169515|ref|ZP_10492947.1| oligoribonuclease [Alishewanella aestuarii B11]
gi|374569066|gb|EHR40233.1| oligoribonuclease [Alishewanella jeotgali KCTC 22429]
gi|396088819|gb|EJI86397.1| oligoribonuclease [Alishewanella aestuarii B11]
Length = 182
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + D ILE+A I+TD +L EGP I E LD+M WC H
Sbjct: 8 LIWLDLEMTGLEPKTDVILEMATIVTDSQLNILAEGPVFAIKTADEILDNMDPWCVEQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S +T EAE+Q + F+ + V + GNS+ D FL +Y P+L + F
Sbjct: 68 KSGLTARCRASTVTLAEAEQQTIAFLSQYVSKGKSPMCGNSIGQDRRFLAEYAPELEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW+P +KV K H ALDDIRESI EL Y++ F+
Sbjct: 128 HYRNLDVSTVKELARRWHPEVLQKV-QKSSSHLALDDIRESIAELVTYRQYFFR 180
>gi|403737905|ref|ZP_10950633.1| oligoribonuclease [Austwickia chelonae NBRC 105200]
gi|403192017|dbj|GAB77403.1| oligoribonuclease [Austwickia chelonae NBRC 105200]
Length = 216
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 112/175 (64%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD L + EG D+VI + L M ++ +N H
Sbjct: 14 IVWIDCEMTGLSLTDDALIEVAALVTDFDLNQLGEGVDVVIRPEEAALAQMNDFVRNMHT 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
+SGL + L +G++ EA+++V+++V++ +PL GN+V D FL + MP+L
Sbjct: 74 SSGLLDE-LAAGVSLPEAQERVLDYVRRWAPEAGRSPL-GGNTVATDRGFLARDMPELEQ 131
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P+K HRAL DIRESI EL+YY+E +F
Sbjct: 132 WLHYRIIDVSSIKELSRRWYPRAYFNAPTKHGGHRALADIRESIAELRYYREAVF 186
>gi|383861835|ref|XP_003706390.1| PREDICTED: probable oligoribonuclease-like [Megachile rotundata]
Length = 205
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 6/175 (3%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D+EMTGL I D ILEIAC+ITD L + ++V+HQ E L++M +WC H+
Sbjct: 29 IVWLDMEMTGLDINTDYILEIACLITDKNLQVISKDLNIVVHQPDEILNNMNDWCLQTHK 88
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL S +T ++AE+ ++EF+K +V T LAG+SVY+D +FL KYMP +
Sbjct: 89 KTGLIDASRSSKITIQDAEQAILEFLKLHVEEKTCPLAGSSVYMDRIFLYKYMPLVNDYL 148
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIF 243
+ ++D ++IK L RW +P+ KE HRAL DI+ESI EL+ YK +IF
Sbjct: 149 HYRIIDTTTIKELIRRWNT----DIPALNKEHDHRALSDIKESIKELELYKTHIF 199
>gi|443627260|ref|ZP_21111656.1| putative Oligoribonuclease [Streptomyces viridochromogenes Tue57]
gi|443339247|gb|ELS53493.1| putative Oligoribonuclease [Streptomyces viridochromogenes Tue57]
Length = 200
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDSALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T +AE+QV+ +V+++V PL GNSV D FL + MP L
Sbjct: 65 ASGLLAE-LPGGTTLADAEEQVLAYVREHVKEPGKAPL-CGNSVGTDRGFLLRDMPTLED 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 YLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVF 177
>gi|372276512|ref|ZP_09512548.1| oligoribonuclease [Pantoea sp. SL1_M5]
gi|390435535|ref|ZP_10224073.1| oligoribonuclease [Pantoea agglomerans IG1]
Length = 182
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 9 LIWIDLEMTGLDPTHDRIIEIATLVTDANLNILAEGPVMAVHQSDAQLALMDEWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + +R AE +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 NSGLVARVKESQIDDRAAELATIEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K H+ALDDIRES+ EL YY+E+ +
Sbjct: 129 HYRYLDVSTLKELARRWKP-DILPGFKKGGTHQALDDIRESVAELAYYREHFLQ 181
>gi|300721471|ref|YP_003710746.1| oligoribonuclease [Xenorhabdus nematophila ATCC 19061]
gi|297627963|emb|CBJ88512.1| oligoribonuclease [Xenorhabdus nematophila ATCC 19061]
Length = 181
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD +L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDSELNILAEGPVIAVHQSDEQLALMDDWNIRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +AEK + F+++ V + GNSV D FL +YMP+L F
Sbjct: 68 GSGLVERVKQSQCDDAQAEKATIAFLEQWVPAGKSPICGNSVGQDRRFLFRYMPELEKYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + SK+ H+ALDDIRESI EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPELLSEF-SKKNTHQALDDIRESIAELVYYREHFIQ 180
>gi|227113804|ref|ZP_03827460.1| oligoribonuclease [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
gi|227326226|ref|ZP_03830250.1| oligoribonuclease [Pectobacterium carotovorum subsp. carotovorum
WPP14]
gi|403060180|ref|YP_006648397.1| oligoribonuclease [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402807506|gb|AFR05144.1| oligoribonuclease [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 180
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 7 LIWIDLEMTGLNPDHDRIIEIATLVTDANLNVLAEGPVMAVHQSDSQLALMDDWNVRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT +V S ER AE + + F++K V + GNS+ D FL +YMP+L + F
Sbjct: 67 ASGLTDRVKASTTDERAAELETLAFLQKWVPAGKSPICGNSIGQDRRFLFRYMPELEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN +
Sbjct: 127 HYRYLDVSTLKELARRWKPEILTGF-KKQGTHQAMDDIRESLAELAYYRENFLR 179
>gi|350426870|ref|XP_003494569.1| PREDICTED: oligoribonuclease-like [Bombus impatiens]
Length = 185
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 111/177 (62%), Gaps = 1/177 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL E DRI+EIA I+TD L EGP I+Q+++ L M +W N
Sbjct: 9 KNNLIWIDLEMTGLSPEQDRIIEIATIVTDSNLNILAEGPVFAINQSEQQLSLMDDWNIN 68
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H +GL ++V S +TE++AE+ ++F+K+ V + GNS+ D FL +YMP L
Sbjct: 69 THTRTGLIERVRASTVTEQQAEQHTIDFLKQWVPENCSPICGNSIGQDRRFLYRYMPKLE 128
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ F + +DVS++K L RW P + +K H+ALDDI++SI EL YY+++ +
Sbjct: 129 AYFHYRYLDVSTLKELAKRWKPEILTGL-TKHATHQALDDIKDSIAELAYYRQHFIQ 184
>gi|440509657|ref|YP_007347093.1| oligoribonuclease [Candidatus Blochmannia chromaiodes str. 640]
gi|440453870|gb|AGC03362.1| oligoribonuclease [Candidatus Blochmannia chromaiodes str. 640]
Length = 187
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRILEIA ++TD KL EGP + IHQ++ L M +W H
Sbjct: 6 LIWIDLEMTGLNPEWDRILEIATLVTDSKLNILSEGPVISIHQSESQLLLMDDWNTRVHS 65
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
A+GL +KV S L E A ++F++ VG + GNS+ D +FL +YMP+L S F
Sbjct: 66 ATGLIEKVRCSTLDEVSASNLTIKFLRNWVGFKKSPICGNSIAQDRIFLFRYMPELESYF 125
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+H +DVS+IK L +RW P D ++ H ALDDIRES+ EL YY+++ +
Sbjct: 126 NHRYLDVSTIKELMVRWRP-DLISGLRLQKTHCALDDIRESVAELMYYRKHFIQ 178
>gi|294139250|ref|YP_003555228.1| oligoribonuclease [Shewanella violacea DSS12]
gi|293325719|dbj|BAJ00450.1| oligoribonuclease [Shewanella violacea DSS12]
Length = 181
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E DR++EIA I+TD +L EGP + IHQT E L +M +W Q HH
Sbjct: 8 LIWVDLEMTGLDPETDRVIEIATIVTDKELNILAEGPVIAIHQTDEQLATMDDWNQKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S E +A ++F+ + V + GNS+ D F+ KYM L F
Sbjct: 68 ESGLVERVRSSQYNEDDAIAMTIKFISQYVPQGVSPMCGNSIGQDRRFMNKYMGKLEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS+IK L RW P + +K+ H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNIDVSTIKELTRRWKP-ELMDGFTKQGTHKALVDIQESIAELQYYRAKVFK 180
>gi|152973034|ref|YP_001338180.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|166216264|sp|A6TH79.1|ORN_KLEP7 RecName: Full=Oligoribonuclease
gi|150957883|gb|ABR79913.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 181
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S ++E +AE ++F+K+ V + GNS+ D FL KYMP L + F
Sbjct: 68 GSGLVDRVKASTVSEHDAELATIDFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-KKQGTHQAMDDIRESVAELAYYREHFIK 180
>gi|410632747|ref|ZP_11343398.1| oligoribonuclease [Glaciecola arctica BSs20135]
gi|410147612|dbj|GAC20265.1| oligoribonuclease [Glaciecola arctica BSs20135]
Length = 181
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL+ E D +LEIA I+TD L EGP L I+Q E L+ M +WC + H
Sbjct: 8 LVWIDMEMTGLEPETDVVLEIATIVTDKDLNILAEGPVLAIYQPDEVLNGMDQWCTDTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK+ S + E++A +Q + F++ V L GN++ D FL KYM +L F
Sbjct: 68 KSGLTKRCRESNVNEQQAVQQTIAFLEGFVPKGISPLCGNTIGQDRRFLVKYMSELEGYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P K+ H ALDDIRESI E+ YY++++F
Sbjct: 128 HYRNIDVSTIKELVRRWKPELLDGF-HKKGVHLALDDIRESIAEMVYYRQHVF 179
>gi|392417353|ref|YP_006453958.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium chubuense
NBB4]
gi|390617129|gb|AFM18279.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium chubuense
NBB4]
Length = 215
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ DR++EIA ++TD +L +G D+VIH ++ L SM + H
Sbjct: 9 LVWIDCEMTGLDLKSDRLIEIAVLVTDSELNVLGDGLDVVIHTDEDALSSMIDVVAQMHS 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++V S + AE+ +++++++V T LAGNS+ D F+ + MP L
Sbjct: 69 KSGLVEEVRASTVDLATAEEMALDYIREHVKQAKTAPLAGNSIATDRGFIARDMPKLDDY 128
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY++ F
Sbjct: 129 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELRYYRQTAF 182
>gi|429462700|ref|YP_007184163.1| oligoribonuclease [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811545|ref|YP_007448000.1| oligoribonuclease [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338214|gb|AFZ82637.1| oligoribonuclease [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776703|gb|AGF47702.1| oligoribonuclease [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 181
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EM+GL + +RILEIA +IT+ L +GP LVI Q+ E LD+M +W + H
Sbjct: 9 LVWIDMEMSGLDMHKERILEIAVLITNNNLDIISKGPVLVIKQSDEILDAMDKWNTSVHN 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S L E +AE +++F+KK V L GN+++ D F+K YMP+L + F
Sbjct: 69 RSGLVDKVRKSELNESDAEIIILDFLKKYVIVNKSPLCGNTIHQDRNFMKLYMPNLENFF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVSSIK + RW+P D + K+ +H AL DI ESI ELK+YK++ F
Sbjct: 129 HYRNIDVSSIKEVIHRWHP-DTKCKFIKQNQHEALADIYESIEELKFYKKHFF 180
>gi|251788035|ref|YP_003002756.1| Exonuclease RNase T and DNA polymerase III [Dickeya zeae Ech1591]
gi|247536656|gb|ACT05277.1| Exonuclease RNase T and DNA polymerase III [Dickeya zeae Ech1591]
Length = 180
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ L M EW H
Sbjct: 7 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTLAVHQSDSQLALMDEWNVRTHT 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S +R AE + + F+++ V + GNS+ D FL +YMP+L + F
Sbjct: 67 ASGLVERVKASAYDDRAAELETLRFLQQWVPAGKSPICGNSIGQDRRFLFRYMPELEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K H+ALDDIRES+ EL YY+E+ +
Sbjct: 127 HYRYLDVSTLKELARRWKPEMLAGF-KKRNTHQALDDIRESVAELAYYREHFIQ 179
>gi|239814490|ref|YP_002943400.1| oligoribonuclease [Variovorax paradoxus S110]
gi|239801067|gb|ACS18134.1| Exonuclease RNase T and DNA polymerase III [Variovorax paradoxus
S110]
Length = 198
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EM+GL E +R+LEIA ++T LT ++GP LVIHQ+ LD+M W + H
Sbjct: 23 LVWLDCEMSGLDPEKERLLEIAVVVTGPDLTPRIDGPVLVIHQSDAVLDAMDAWNKGTHG 82
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S L E AE+Q++EFV + V + GN++ D FL K+MP L + F
Sbjct: 83 RSGLIDKVKASTLDEAAAEQQLLEFVARYVPRSGSPMCGNTIGQDRRFLVKFMPKLEAYF 142
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P Y K+Q H AL D+ ESI EL +Y+E K
Sbjct: 143 HYRNLDVSTLKELAKRWKPSAYSAF-KKQQAHTALADVHESIEELAHYRETFLK 195
>gi|183983834|ref|YP_001852125.1| oligoribonuclease [Mycobacterium marinum M]
gi|183177160|gb|ACC42270.1| oligoribonuclease Orn [Mycobacterium marinum M]
Length = 215
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD L +G D+VIH L SM + + H
Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVIHADDAALSSMVDVVADMHS 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE V++++ ++V T LAGNS+ D F+ + MP L +
Sbjct: 65 RSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPKTAPLAGNSIATDRSFIARDMPALDAF 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPPKGLAHRALADIHESIRELQYYRRTAF 178
>gi|365846256|ref|ZP_09386761.1| oligoribonuclease [Yokenella regensburgei ATCC 43003]
gi|364574368|gb|EHM51833.1| oligoribonuclease [Yokenella regensburgei ATCC 43003]
Length = 181
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R AE +EF+K+ V + GNS+ D FL KYMP+L S F
Sbjct: 68 GSGLVERVKASTQDDRAAELATIEFLKQWVPEGKSPICGNSIGQDRRFLFKYMPELESYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQGTHQAMDDIRESVAELAYYREHFIQ 180
>gi|290462733|gb|ADD24414.1| Oligoribonuclease, mitochondrial [Lepeophtheirus salmonis]
Length = 216
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 116/202 (57%), Gaps = 12/202 (5%)
Query: 48 SSNLTL-ENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEG 106
S NL++ EN+ N +VWID EMTGL +EVD ++E+A IITD L + EG
Sbjct: 24 SRNLSMSENRSNRDR---------IVWIDCEMTGLDLEVDVLMEVAVIITDKNLKPTKEG 74
Query: 107 PDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY--T 164
++VIHQ LD+M + + HE +GLT S + ++AE + F+K GT
Sbjct: 75 LNIVIHQPDSVLDAMTGFPKESHEKTGLTAACRMSKIGVKQAENDICNFIKMECGTTFGR 134
Query: 165 PLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRA 224
PLLAGNSV D FL+KYMP + + + ++DVS+I W + P K + HRA
Sbjct: 135 PLLAGNSVGFDAKFLRKYMPSVTDILHYRIIDVSTIHECYNLWDREKLKFCPKKRKTHRA 194
Query: 225 LDDIRESIMELKYYKENIFKTN 246
LDDI ESI ++K +K +FK N
Sbjct: 195 LDDILESIEQMKVFKRIMFKQN 216
>gi|72162668|ref|YP_290325.1| oligoribonuclease [Thermobifida fusca YX]
gi|71916400|gb|AAZ56302.1| exonuclease [Thermobifida fusca YX]
Length = 213
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 109/178 (61%), Gaps = 10/178 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ D ++E+AC+ITDG+L + EG ++VI +E LD MGE+ H
Sbjct: 5 LVWIDCEMTGLDLKKDALIEVACLITDGELNQLDEGINVVIKPPQEALDQMGEFVTQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP-----LLAGNSVYVDFMFLKKYMPD 185
SGL + L +G+T EAE+ V++ +++ Y P L GNS+ D FL + MP
Sbjct: 65 TSGLLAE-LENGVTLAEAEQLVLDHIRR----YIPEPKKVPLCGNSIATDRAFLARDMPR 119
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ + +VDVSS+K L RWYPR Y P K HRAL DI ESI EL+Y++ F
Sbjct: 120 VDEHLHYRMVDVSSVKELLRRWYPRVYFASPEKHGGHRALADITESIRELRYFRAAAF 177
>gi|239987915|ref|ZP_04708579.1| oligoribonuclease [Streptomyces roseosporus NRRL 11379]
gi|291444893|ref|ZP_06584283.1| oligoribonuclease [Streptomyces roseosporus NRRL 15998]
gi|291347840|gb|EFE74744.1| oligoribonuclease [Streptomyces roseosporus NRRL 15998]
Length = 201
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLADDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T EAE+QV+ +V+++V PL GNSV D FL + M DL S
Sbjct: 65 ASGLLDE-LAGGTTLAEAEEQVLSYVREHVKEPGKAPL-CGNSVGTDRGFLARDMRDLES 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RW+PR Y P K HRAL DIR+SI EL+YY+E +F
Sbjct: 123 YLHYRIVDVSSVKELARRWFPRAYFNSPDKNGNHRALADIRDSITELRYYREAVF 177
>gi|399519268|ref|ZP_10760076.1| oligoribonuclease [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399113092|emb|CCH36634.1| oligoribonuclease [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 180
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ E D I+E+A I+TD +L EGP + +HQ+ E L M EW H
Sbjct: 7 LIWIDLEMTGLEPERDVIIEMATIVTDSELNVLAEGPVIAVHQSDEALAGMDEWNTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + AE Q + F+++ V + GNS+ D FL KYMP L + F
Sbjct: 67 QSGLTQRVRESKIDTAAAEAQTIAFLEQWVPKGQSPICGNSIGQDRRFLYKYMPALEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L W P+ R K H+ALDDIRESI EL++Y+E+ K
Sbjct: 127 HYRYLDVSTLKILAGLWAPQ-VRDSFQKTATHQALDDIRESIAELRHYREHFLK 179
>gi|398801104|ref|ZP_10560352.1| oligoribonuclease (3'->5' exoribonuclease) [Pantoea sp. GM01]
gi|398092746|gb|EJL83152.1| oligoribonuclease (3'->5' exoribonuclease) [Pantoea sp. GM01]
Length = 182
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP +HQ+ + L M +W H
Sbjct: 9 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILAEGPVFAVHQSDDQLALMDDWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +R AE +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 NSGLVARVKASQHDDRAAELATIEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K H+ALDDIRES+ EL YY+E+ +
Sbjct: 129 HYRYLDVSTLKELARRWKP---GILPGFKKSGSHQALDDIRESVAELAYYREHFLQ 181
>gi|84494356|ref|ZP_00993475.1| oligoribonuclease [Janibacter sp. HTCC2649]
gi|84383849|gb|EAP99729.1| oligoribonuclease [Janibacter sp. HTCC2649]
Length = 226
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL +E D ++E+A ++TD +L +G D+VI T E L+ MG++ + H
Sbjct: 16 IVWIDCEMTGLSLENDALVEVAALVTDFELNILGDGVDVVIKPTDEALEQMGDFVREMHT 75
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
+SGL + G+T EA+++V+++V++ V L GN+V D FL + MP L
Sbjct: 76 SSGLINE-FADGVTIEEAQQRVLDYVREWVPEPRKAPLGGNTVATDRGFLARDMPALEEH 134
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+ +F
Sbjct: 135 LHYRIIDVSSIKELSRRWYPRAYFAAPDKNGGHRALADIRESIAELRYYRAAVF 188
>gi|429194161|ref|ZP_19186271.1| exonuclease [Streptomyces ipomoeae 91-03]
gi|428670133|gb|EKX69046.1| exonuclease [Streptomyces ipomoeae 91-03]
Length = 200
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDSALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL L G T +AE+QV+ +V+++V PL GNSV D FL + MP L
Sbjct: 65 ASGLLD-ALPGGTTLADAEEQVLAYVREHVKEPGKAPL-CGNSVGTDRGFLVRDMPTLED 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E IF
Sbjct: 123 YLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIF 177
>gi|423016415|ref|ZP_17007136.1| oligoribonuclease [Achromobacter xylosoxidans AXX-A]
gi|338780562|gb|EGP44968.1| oligoribonuclease [Achromobacter xylosoxidans AXX-A]
Length = 181
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ+ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQSDSLLDAMDSWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S ++E +AE ++ F+ ++V L GN++ D F+ YMP L F
Sbjct: 68 KSGLIDKVRASTISEAQAEDTLLAFLAQHVPAGKSPLCGNTISQDRRFMFAYMPRLEQFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELKYY+E+ K
Sbjct: 128 HYRNLDVSTLKELARRWAPAVYKGF-EKKSRHEALADIYESIDELKYYREHFLKV 181
>gi|407682309|ref|YP_006797483.1| oligoribonuclease [Alteromonas macleodii str. 'English Channel
673']
gi|407243920|gb|AFT73106.1| oligoribonuclease [Alteromonas macleodii str. 'English Channel
673']
Length = 181
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL E ++EIA I+TD +L EGP + +HQ+ + L++M EWC H
Sbjct: 8 LVWIDMEMTGLDPETCVVMEIATIVTDAQLNILAEGPVIAVHQSDDVLNNMDEWCTRVHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S ++ EA Q + F+++ V L GN++ D F+ KYMP+L + F
Sbjct: 68 ESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCGNTIGQDRRFMVKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P K+ H ALDDIRESI E++YY+E +F
Sbjct: 128 HYRNIDVSTIKELTRRWKPEILGGF-EKKGVHLALDDIRESIEEMRYYREKVF 179
>gi|406595380|ref|YP_006746510.1| oligoribonuclease [Alteromonas macleodii ATCC 27126]
gi|407686229|ref|YP_006801402.1| oligoribonuclease [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407698703|ref|YP_006823490.1| oligoribonuclease [Alteromonas macleodii str. 'Black Sea 11']
gi|406372701|gb|AFS35956.1| oligoribonuclease [Alteromonas macleodii ATCC 27126]
gi|407247850|gb|AFT77035.1| oligoribonuclease [Alteromonas macleodii str. 'Black Sea 11']
gi|407289609|gb|AFT93921.1| oligoribonuclease [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 181
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL E ++EIA I+TD +L EGP + +HQ+ + L++M EWC H
Sbjct: 8 LVWIDMEMTGLDPETCVVMEIATIVTDAQLNILAEGPVIAVHQSDDVLNNMDEWCTRVHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S ++ EA Q + F+++ V L GN++ D F+ KYMP+L + F
Sbjct: 68 ESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCGNTIGQDRRFMVKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P K+ H ALDDIRESI E++YY+E +F
Sbjct: 128 HYRNIDVSTIKELTRRWKPEILDGF-EKKGVHLALDDIRESIEEMRYYREKVF 179
>gi|315656346|ref|ZP_07909235.1| oligoribonuclease [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315492905|gb|EFU82507.1| oligoribonuclease [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 198
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 109/170 (64%), Gaps = 2/170 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + VD ++E+A I+TD +L G DL+I + ++ MGE+ + H
Sbjct: 1 MVWIDCEMTGLDLHVDELIEVAVIVTDAELNPLDSGIDLLIKPSATAMNHMGEFVREMHT 60
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL K L +GL+ EA +QV+++VK+ V LAGNSV+ D FL K MP+L +
Sbjct: 61 KSGLLAK-LDTGLSVEEAGRQVLDYVKRLVPEPGKAQLAGNSVHSDKAFLAKQMPELINW 119
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
+ ++DVS++K L MRWYP+ Y P K HRAL DI +S+ EL+YY+
Sbjct: 120 LHYRIIDVSTLKELAMRWYPKVYGLAPEKTGNHRALGDIIDSLNELRYYR 169
>gi|330501616|ref|YP_004378485.1| oligoribonuclease [Pseudomonas mendocina NK-01]
gi|328915902|gb|AEB56733.1| oligoribonuclease [Pseudomonas mendocina NK-01]
Length = 180
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ E D I+E+A I+TD +L EGP + IHQ++E L M EW H
Sbjct: 7 LIWIDLEMTGLEPERDVIIEMATIVTDSELNVLAEGPVIAIHQSEEALAGMDEWNTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + AE Q + F+++ V + GNS+ D FL KYMP L + F
Sbjct: 67 QSGLTQRVRESRIDTAAAEAQTIAFLEQWVPKGKSPICGNSIGQDRRFLYKYMPALEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L W P + + K H+ALDDIRESI EL++Y+E+ K
Sbjct: 127 HYRYLDVSTLKILAGMWAP-EVKDSFQKTATHQALDDIRESIAELRHYREHFLK 179
>gi|387885786|ref|YP_006316085.1| oligoribonuclease [Francisella noatunensis subsp. orientalis str.
Toba 04]
gi|386870602|gb|AFJ42609.1| oligoribonuclease [Francisella noatunensis subsp. orientalis str.
Toba 04]
Length = 178
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 114/175 (65%), Gaps = 7/175 (4%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWIDLEMTGL ++ RI+EIA IITD + E +VIHQ+ E L+SM EWC H
Sbjct: 7 LVWIDLEMTGLDVDSCRIIEIAAIITDKNINIIAEAEPIVIHQSDEILNSMNEWCIKVHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT++V S + ++AE++++EF+K+ V + L GNS++ D FL KYMPD+ +
Sbjct: 67 ETGLTQRVKDSKTSLKQAEQKILEFIKEYVPFQSSPLCGNSIWQDRRFLAKYMPDIDNYC 126
Query: 191 SHVLVDVSSIKALCMRWYPRD--YRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DV+S+K L W + Y+K H+ALDDIRESI ELK+Y++ +
Sbjct: 127 HYRMLDVTSLKLLHEYWGDGESFYKK-----STHKALDDIRESINELKFYRQKLL 176
>gi|118619032|ref|YP_907364.1| oligoribonuclease [Mycobacterium ulcerans Agy99]
gi|166216272|sp|A0PU74.1|ORN_MYCUA RecName: Full=Oligoribonuclease
gi|118571142|gb|ABL05893.1| oligoribonuclease Orn [Mycobacterium ulcerans Agy99]
Length = 215
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD L +G D+VIH L SM + + H
Sbjct: 5 LVWIDCEMTGLDLGPDKLIEIAALVTDADLNILGDGVDVVIHADDAALSSMVDVVADMHS 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT++V S + AE V++++ ++V T LAGNS+ D F+ + MP L +
Sbjct: 65 RSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPKTAPLAGNSIATDRSFIARDMPALDAF 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPPKGLAHRALADIHESIRELQYYRRTAF 178
>gi|393762918|ref|ZP_10351541.1| oligoribonuclease [Alishewanella agri BL06]
gi|392605835|gb|EIW88723.1| oligoribonuclease [Alishewanella agri BL06]
Length = 182
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 103/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + D ILE+A I+TD +L EGP I E LD+M WC H
Sbjct: 8 LIWLDLEMTGLEPKTDVILEMATIVTDSQLNILAEGPVFAIKTADEILDNMDPWCVEQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S +T EAE+Q + F+ + V + GNS+ D FL +Y P+L + F
Sbjct: 68 KSGLTARCRASTVTLAEAEQQTIAFLSQYVSKGKSPMCGNSIGQDRRFLAEYAPELEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW+P KV K H ALDDIRESI EL Y++ F+
Sbjct: 128 HYRNLDVSTVKELARRWHPEVLNKV-QKSSSHLALDDIRESIAELVTYRQYFFR 180
>gi|25028926|ref|NP_738980.1| oligoribonuclease [Corynebacterium efficiens YS-314]
gi|259507990|ref|ZP_05750890.1| oligoribonuclease [Corynebacterium efficiens YS-314]
gi|29611789|sp|Q8FMX9.1|ORN_COREF RecName: Full=Oligoribonuclease
gi|23494213|dbj|BAC19180.1| putative oligoribonuclease [Corynebacterium efficiens YS-314]
gi|259164485|gb|EEW49039.1| oligoribonuclease [Corynebacterium efficiens YS-314]
Length = 221
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+DLEMTGL +E I+E+A ++TD L EG DLV+H T E L M ++ H+
Sbjct: 21 LVWVDLEMTGLDLERHVIVEVAALVTDANLNILGEGVDLVVHATDEELARMDDFVTRMHD 80
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASL 189
+SGLT + S ++ ++AE V+ ++++ P LAGNS+ D F+++ MP L +
Sbjct: 81 SSGLTPLIRASTVSLKDAEDAVLALIEEHCDPAHPAPLAGNSIATDRAFIREQMPRLDAA 140
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RW PR Y K P+K HRAL DI ESI EL YY+ + F
Sbjct: 141 LHYRMVDVSSVKELARRWCPRVYYKQPTKGLAHRALADIVESIRELDYYRRSFF 194
>gi|332139961|ref|YP_004425699.1| oligoribonuclease [Alteromonas macleodii str. 'Deep ecotype']
gi|410860152|ref|YP_006975386.1| oligoribonuclease [Alteromonas macleodii AltDE1]
gi|327549983|gb|AEA96701.1| oligoribonuclease [Alteromonas macleodii str. 'Deep ecotype']
gi|410817414|gb|AFV84031.1| oligoribonuclease [Alteromonas macleodii AltDE1]
Length = 181
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL E ++EIA I+TD +L EGP + +HQ+ + L++M EWC H
Sbjct: 8 LVWIDMEMTGLDPETCVVMEIATIVTDAQLNILAEGPVIAVHQSDDVLNNMDEWCTRVHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S ++ EA Q + F+++ V L GN++ D F+ KYMP+L + F
Sbjct: 68 ESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCGNTIGQDRRFMVKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P K+ H ALDDIRESI E++YY+E +F
Sbjct: 128 HYRNIDVSTIKELTRRWKPEVLDGF-EKKGVHLALDDIRESIEEMRYYREKVF 179
>gi|145223130|ref|YP_001133808.1| oligoribonuclease [Mycobacterium gilvum PYR-GCK]
gi|145215616|gb|ABP45020.1| Exonuclease, RNase T and DNA polymerase III [Mycobacterium gilvum
PYR-GCK]
Length = 214
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ D ++EIA ++TD +L +G D+VIH LDSM + H
Sbjct: 8 LVWIDCEMTGLDLKTDLLIEIAVLVTDSELNILGDGLDVVIHAEDSALDSMIDVVTQMHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++V S + AE V+ +++++V T LAGNS+ D FL + MP L
Sbjct: 68 KSGLIEEVRASTVDVATAEDMVMTYIREHVRQAKTAPLAGNSIATDRGFLARDMPKLDDY 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL+YY++ F
Sbjct: 128 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELRYYRQTAF 181
>gi|422322147|ref|ZP_16403189.1| oligoribonuclease [Achromobacter xylosoxidans C54]
gi|317402939|gb|EFV83479.1| oligoribonuclease [Achromobacter xylosoxidans C54]
Length = 181
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ+ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQSDSLLDAMDNWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S ++E +AE ++ F+ ++V L GN++ D F+ YMP L F
Sbjct: 68 KSGLIDKVRASTISEAQAEDTLLAFLAQHVPAGKSPLCGNTISQDRRFMFAYMPRLEQFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELKYY+E+ K
Sbjct: 128 HYRNLDVSTLKELARRWAPGVYKGF-EKKSRHEALADIYESIDELKYYREHFLKV 181
>gi|381397821|ref|ZP_09923230.1| Oligoribonuclease [Microbacterium laevaniformans OR221]
gi|380774949|gb|EIC08244.1| Oligoribonuclease [Microbacterium laevaniformans OR221]
Length = 207
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL +EVD ++EIA ++TD +L G +VI L +M ++ HE
Sbjct: 10 LVWIDCEMTGLDLEVDELVEIAIVVTDFELNVLDPGFQVVIKPDASALANMNDFVTRMHE 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGL ++ G++ EAE + +E++++ LAGN++ D MFL KYMP +
Sbjct: 70 SSGLLAEI-PGGISLAEAEFEALEYIQRFAPEGKAPLAGNTIGTDRMFLAKYMPRVDRWL 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSSIK L RWYPR Y P+K+ HRAL DI ESI EL YY++ +F
Sbjct: 129 HYRSVDVSSIKELSRRWYPRAYFNAPAKDGGHRALADILESIRELAYYRQAVF 181
>gi|270264991|ref|ZP_06193254.1| oligoribonuclease [Serratia odorifera 4Rx13]
gi|270040925|gb|EFA14026.1| oligoribonuclease [Serratia odorifera 4Rx13]
Length = 181
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLGLMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R AE + + F+++ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASRFDDRAAELETIAFLQQWVPAGKSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ K+ H+A+DDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPQILSGF-KKQGTHQAMDDIRESVAELAYYREHFIQ 180
>gi|41408418|ref|NP_961254.1| oligoribonuclease [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|417747408|ref|ZP_12395877.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium avium
subsp. paratuberculosis S397]
gi|440776398|ref|ZP_20955244.1| oligoribonuclease [Mycobacterium avium subsp. paratuberculosis S5]
gi|48428193|sp|P61651.1|ORN_MYCPA RecName: Full=Oligoribonuclease
gi|41396774|gb|AAS04637.1| hypothetical protein MAP_2320 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|336460994|gb|EGO39874.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium avium
subsp. paratuberculosis S397]
gi|436723565|gb|ELP47373.1| oligoribonuclease [Mycobacterium avium subsp. paratuberculosis S5]
Length = 215
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD +L +G D+VIH L +MGE H
Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDAELNVLGDGVDVVIHADDAALAAMGEVVTEMHS 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL +V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L +
Sbjct: 65 RSGLIDEVKASTVDLATAEEMVLDYIRTHVKAPKTAPLAGNSIATDRAFIVRDMPALDAY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI EL++Y+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPVKGLTHRALADIHESIRELQFYRRTAF 178
>gi|254787466|ref|YP_003074895.1| oligoribonuclease [Teredinibacter turnerae T7901]
gi|237686441|gb|ACR13705.1| oligoribonuclease [Teredinibacter turnerae T7901]
Length = 182
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E D I+EIA ++TD L EGP + IHQ LD M EWC N H
Sbjct: 8 LIWVDLEMTGLVPERDFIIEIATVVTDEHLNILAEGPVMAIHQPDAVLDLMDEWCTNQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S +T AE + F+ + V + GNS+ D FL+++MP LA F
Sbjct: 68 KSGLTQRVRDSDVTTANAEVATLAFLCEWVPAGKSPMCGNSIGQDRRFLQRFMPKLADYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + + +K+ H ALDDIRESI E+ YY+++ +
Sbjct: 128 HYRNLDVSTLKELVSRWRP-ELKDGFTKQGTHLALDDIRESIAEMSYYRDHFIQ 180
>gi|219872207|ref|YP_002476582.1| oligoribonuclease [Haemophilus parasuis SH0165]
gi|219692411|gb|ACL33634.1| oligoribonuclease [Haemophilus parasuis SH0165]
Length = 168
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 78 MTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKK 137
MTGL E +RI+EIA IITD L EGP L ++Q E L+ M EWC H A+GL ++
Sbjct: 1 MTGLDPEKERIIEIATIITDKDLNILAEGPVLAVYQPDELLNKMSEWCVKTHTANGLVER 60
Query: 138 VLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDV 197
V S LTER AE Q ++F+KK V + GNS+ D FL KYMP+LA F + +DV
Sbjct: 61 VKQSKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLYKYMPNLADYFHYRHLDV 120
Query: 198 SSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
S++K L RW P ++ SK+ H ALDDI+ESI ELK+Y+ +
Sbjct: 121 STLKELASRWKPEMLKQF-SKKNSHLALDDIKESIEELKFYRHHFI 165
>gi|339481853|ref|YP_004693639.1| Oligoribonuclease [Nitrosomonas sp. Is79A3]
gi|338803998|gb|AEJ00240.1| Oligoribonuclease [Nitrosomonas sp. Is79A3]
Length = 196
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EMTGL + DRI+E+A ++TD +L EGP L +HQ+ E LD M +W ++ H
Sbjct: 23 LIWVDMEMTGLSPDTDRIIEVALVVTDSQLNVIAEGPVLAVHQSDEILDGMDKWNRSTHS 82
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S E E E Q++EF+K +V + + GNS+ D F+ + MP L + F
Sbjct: 83 KSGLIDKVKASRFNEVEVEAQMIEFLKLHVPSGVSPMCGNSICQDRRFMVRTMPQLEAYF 142
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+ K L RW P + +KE KH AL DI +SI ELKYY+++
Sbjct: 143 HYRNLDVSTFKELVKRWKPEIASGL-TKESKHEALADIYDSINELKYYRQHFI 194
>gi|308048230|ref|YP_003911796.1| Exonuclease RNase T and DNA polymerase III [Ferrimonas balearica
DSM 9799]
gi|307630420|gb|ADN74722.1| Exonuclease RNase T and DNA polymerase III [Ferrimonas balearica
DSM 9799]
Length = 181
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E + I+EIA I+TD +L EGP L +HQ + L M EW H
Sbjct: 8 LIWIDLEMTGLDPEQNTIIEIATIVTDSELNVLAEGPVLAVHQPESELAKMDEWNVRTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + EAE+Q + F+ + V + GNSV D FL KYMP L + F
Sbjct: 68 NSGLTERVRASKVDMAEAERQTLAFLAEWVPAGASPICGNSVGQDRRFLVKYMPALEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P + SK H+ALDDIRESI EL +Y+ +F
Sbjct: 128 HYRTIDVSTVKELVRRWEPSLLDQF-SKAGTHQALDDIRESIAELTFYRRKVF 179
>gi|91787582|ref|YP_548534.1| oligoribonuclease [Polaromonas sp. JS666]
gi|91696807|gb|ABE43636.1| Exonuclease [Polaromonas sp. JS666]
Length = 187
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 103/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL E +R++EIA ++T +LT +EGP L IHQ+ E LD M W + H
Sbjct: 15 LVWLDCEMTGLDPEKERLIEIAVVVTGPQLTPRIEGPVLAIHQSDELLDQMDNWNKGTHG 74
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S +TE AE Q++ F+ + V L GNS+ D FL KYMP L +
Sbjct: 75 RSGLIDKVKASTVTEEAAEAQLLAFLAQYVPKGGSPLCGNSISQDRRFLVKYMPKLEAFL 134
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS+ K L RW P Y K Q H AL D+ ESI EL++Y+++ K
Sbjct: 135 HYRNVDVSTFKELAKRWRPEVYNSF-KKRQSHTALADVHESIDELEHYRQHFLK 187
>gi|302560513|ref|ZP_07312855.1| oligoribonuclease [Streptomyces griseoflavus Tu4000]
gi|302478131|gb|EFL41224.1| oligoribonuclease [Streptomyces griseoflavus Tu4000]
Length = 200
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M + + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDRALETMPQVVREMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T EAE++V+++++++V PL GNSV D FL + MP L
Sbjct: 65 ASGLLTE-LEGGTTLEEAEQRVLDYIREHVKEPGKAPL-CGNSVGTDRGFLLRDMPTLED 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 YLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESITELRYYREAVF 177
>gi|297194244|ref|ZP_06911642.1| oligoribonuclease [Streptomyces pristinaespiralis ATCC 25486]
gi|197720537|gb|EDY64445.1| oligoribonuclease [Streptomyces pristinaespiralis ATCC 25486]
Length = 200
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL VL G T +AE+QV+ +++++V PL GNSV D FL + MP L +
Sbjct: 65 TSGLLD-VLADGKTLADAEEQVLSYIREHVKEPGKAPL-CGNSVGTDRGFLLRDMPTLEA 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 FLHYRIVDVSSIKELARRWYPRAYFNSPEKSGNHRALADIRESIAELRYYREAVF 177
>gi|340360447|ref|ZP_08682917.1| oligoribonuclease [Actinomyces sp. oral taxon 448 str. F0400]
gi|339883648|gb|EGQ73491.1| oligoribonuclease [Actinomyces sp. oral taxon 448 str. F0400]
Length = 206
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 106/178 (59%), Gaps = 2/178 (1%)
Query: 70 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 129
PLVWID EMTGL + D ++E+A ++TD L EG D++I L+ MG++ + H
Sbjct: 6 PLVWIDCEMTGLDLSADALIEVAVVVTDYDLKPLGEGIDVLIRPPASALEQMGDFVREMH 65
Query: 130 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL + L GLT EA+++V+E V+ V T LAGNSV D FL + MP+L
Sbjct: 66 TTSGLLDE-LGQGLTMTEAQQKVLEHVRSLVPQPRTAQLAGNSVGTDKAFLARDMPELIK 124
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +VDVSSIK L RWYPR + P K HRAL DI ESI EL+YY+ +F
Sbjct: 125 YLHYRVVDVSSIKELAKRWYPRTFFHSPEKHGGHRALADILESIDELRYYRRLLFPAG 182
>gi|290462141|gb|ADD24118.1| Oligoribonuclease, mitochondrial [Lepeophtheirus salmonis]
Length = 216
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 116/202 (57%), Gaps = 12/202 (5%)
Query: 48 SSNLTL-ENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEG 106
S NL++ EN+ N +VWID EMTGL +EVD ++E+A IITD L + EG
Sbjct: 24 SRNLSMSENRSNRDR---------IVWIDCEMTGLDLEVDVLMEVAVIITDKNLKPTKEG 74
Query: 107 PDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY--T 164
++VIHQ LD+M + + H +GLT S + ++AE + F+K+ GT
Sbjct: 75 LNIVIHQPDSVLDAMTGFPKESHAKTGLTAACRMSKIDVKQAENDICNFIKRECGTTFGR 134
Query: 165 PLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRA 224
PLLAGNSV D FL+KYMP + + + ++DVS+I W + P K + HRA
Sbjct: 135 PLLAGNSVGFDAKFLRKYMPSVTDILHYRIIDVSTIHECYNLWDREKLKFCPKKRKTHRA 194
Query: 225 LDDIRESIMELKYYKENIFKTN 246
LDDI ESI ++K +K +FK N
Sbjct: 195 LDDILESIEQMKVFKRIMFKQN 216
>gi|307132771|ref|YP_003884787.1| oligoribonuclease [Dickeya dadantii 3937]
gi|306530300|gb|ADN00231.1| oligoribonuclease [Dickeya dadantii 3937]
Length = 183
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ L M +W H
Sbjct: 10 LIWIDLEMTGLDPERDRIIEIATLVTDANLNVLAEGPTLAVHQPDSQLALMDDWNVRTHT 69
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL +V S E AE++ + F+++ V + GNS+ D FL +YMP+L + F
Sbjct: 70 ASGLVDRVKASAFDEGAAERETIAFLQQWVPAGKSPICGNSIGQDRRFLFRYMPELEAYF 129
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K H+ALDDIRES+ EL YY+E+ +
Sbjct: 130 HYRYLDVSTLKELARRWKPEMLAGF-KKRNTHQALDDIRESVAELAYYREHFIQ 182
>gi|50122884|ref|YP_052051.1| oligoribonuclease [Pectobacterium atrosepticum SCRI1043]
gi|59798024|sp|Q6D037.1|ORN_ERWCT RecName: Full=Oligoribonuclease
gi|49613410|emb|CAG76861.1| oligoribonuclease [Pectobacterium atrosepticum SCRI1043]
Length = 180
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+EIA ++TD L EGP L +HQ+ L M +W H
Sbjct: 7 LIWIDLEMTGLNPDHDRIIEIATLVTDANLNVLAEGPVLAVHQSDSQLALMDDWNVRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT +V S ER AE + + F++K V + GNS+ D FL +YMP+L + F
Sbjct: 67 ASGLTDRVKVSTADERAAELETLAFLQKWVPAGKSPICGNSIGQDRRFLFRYMPELEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN +
Sbjct: 127 HYRYLDVSTLKELARRWKPEIMAGF-KKQGTHQAMDDIRESLAELVYYRENFLR 179
>gi|383814803|ref|ZP_09970221.1| oligoribonuclease [Serratia sp. M24T3]
gi|383296295|gb|EIC84611.1| oligoribonuclease [Serratia sp. M24T3]
Length = 195
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+EIA ++TD L EGP + ++Q++ L M EW H
Sbjct: 22 LIWIDLEMTGLDPKRDRIIEIATLVTDANLNVLAEGPVMAVYQSEAQLGLMDEWNVRTHT 81
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S E A++ +EF+KK V + GNSV D FL YMP+L + F
Sbjct: 82 GSGLVERVKASTFDENAAQQATIEFLKKWVPAGKSPICGNSVGQDRRFLFNYMPELEAYF 141
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 142 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQALDDIRESVAELAYYREHFIQ 194
>gi|311104954|ref|YP_003977807.1| oligoribonuclease [Achromobacter xylosoxidans A8]
gi|310759643|gb|ADP15092.1| oligoribonuclease [Achromobacter xylosoxidans A8]
Length = 181
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQPDSLLDAMDSWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S ++E EAE ++ F+ ++V L GN++ D F+ YMP L F
Sbjct: 68 KSGLIDKVKASTISESEAEDTLLAFLAQHVPAGKSPLCGNTISQDRRFMFAYMPRLEQFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELKYY+E+ K
Sbjct: 128 HYRNLDVSTLKELARRWAPAVYKGF-EKKSRHEALADIYESIDELKYYREHFLKV 181
>gi|404441903|ref|ZP_11007086.1| oligoribonuclease [Mycobacterium vaccae ATCC 25954]
gi|403658020|gb|EJZ12774.1| oligoribonuclease [Mycobacterium vaccae ATCC 25954]
Length = 211
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL ++ D ++EIA ++TD +L EG D+VIH + L SM + H
Sbjct: 5 LVWIDCEMTGLDLKSDLLIEIAVLVTDSELNILGEGLDVVIHADDDALSSMIDVVAQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++V S + AE V+ +++++V T LAGNS+ D F+ + MP L
Sbjct: 65 KSGLVEEVRASTVDVATAEDMVLTYIREHVKQAKTAPLAGNSIATDRGFIARDMPKLDDF 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI ELKYY++ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRQTAF 178
>gi|296112880|ref|YP_003626818.1| oligoribonuclease [Moraxella catarrhalis RH4]
gi|416155736|ref|ZP_11604029.1| oligoribonuclease [Moraxella catarrhalis 101P30B1]
gi|416217261|ref|ZP_11624210.1| oligoribonuclease [Moraxella catarrhalis 7169]
gi|416222031|ref|ZP_11625995.1| oligoribonuclease [Moraxella catarrhalis 103P14B1]
gi|416227595|ref|ZP_11627203.1| oligoribonuclease [Moraxella catarrhalis 46P47B1]
gi|416235241|ref|ZP_11630065.1| oligoribonuclease [Moraxella catarrhalis 12P80B1]
gi|416239384|ref|ZP_11631934.1| oligoribonuclease [Moraxella catarrhalis BC1]
gi|416241821|ref|ZP_11632955.1| oligoribonuclease [Moraxella catarrhalis BC7]
gi|416247608|ref|ZP_11635791.1| oligoribonuclease [Moraxella catarrhalis BC8]
gi|416250213|ref|ZP_11637222.1| oligoribonuclease [Moraxella catarrhalis CO72]
gi|416254473|ref|ZP_11638739.1| oligoribonuclease [Moraxella catarrhalis O35E]
gi|421779694|ref|ZP_16216186.1| oligoribonuclease [Moraxella catarrhalis RH4]
gi|295920574|gb|ADG60925.1| oligoribonuclease [Moraxella catarrhalis BBH18]
gi|326561112|gb|EGE11477.1| oligoribonuclease [Moraxella catarrhalis 7169]
gi|326564455|gb|EGE14682.1| oligoribonuclease [Moraxella catarrhalis 103P14B1]
gi|326564568|gb|EGE14793.1| oligoribonuclease [Moraxella catarrhalis 12P80B1]
gi|326564778|gb|EGE14990.1| oligoribonuclease [Moraxella catarrhalis 46P47B1]
gi|326567572|gb|EGE17687.1| oligoribonuclease [Moraxella catarrhalis BC1]
gi|326569420|gb|EGE19480.1| oligoribonuclease [Moraxella catarrhalis BC8]
gi|326571382|gb|EGE21397.1| oligoribonuclease [Moraxella catarrhalis BC7]
gi|326575336|gb|EGE25264.1| oligoribonuclease [Moraxella catarrhalis CO72]
gi|326576579|gb|EGE26486.1| oligoribonuclease [Moraxella catarrhalis 101P30B1]
gi|326577403|gb|EGE27287.1| oligoribonuclease [Moraxella catarrhalis O35E]
gi|407813404|gb|EKF84186.1| oligoribonuclease [Moraxella catarrhalis RH4]
Length = 195
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL + D I+EIA I+TD +L EGP L I + L+ M +W +N
Sbjct: 17 KKALIWIDLEMTGLDTQQDDIIEIATIVTDDELNILAEGPVLAIKVSDVVLNRMDDWNKN 76
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGL +V S +T +AE Q +EF+ K V + GNS+ D FL + MP L
Sbjct: 77 QHGQSGLIDRVRRSTITLADAEAQTIEFLSKWVDAGISPMCGNSICQDRRFLARQMPKLE 136
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
F + +DVSSIK LC RW P D K H ALDDIR+SI EL++Y+ + FK
Sbjct: 137 RYFHYRNLDVSSIKELCYRWRP-DIATGYQKTGTHLALDDIRDSIRELRHYQAHFFK 192
>gi|258652005|ref|YP_003201161.1| exonuclease RNase T and DNA polymerase III [Nakamurella
multipartita DSM 44233]
gi|258555230|gb|ACV78172.1| Exonuclease RNase T and DNA polymerase III [Nakamurella
multipartita DSM 44233]
Length = 212
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D EMTGL + D+++EIA ++TD L EG D+VIH L +M + H
Sbjct: 5 LVWVDCEMTGLDLGTDKLIEIAALVTDSDLNILGEGVDVVIHADDAALAAMPQVVTEMHA 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGLT +V S +T +AE+ V++++++ V + LAGNS+ D F+ + MP L
Sbjct: 65 KSGLTDRVRESTVTMAQAEQLVLDYIREFVPEPKSAPLAGNSIATDRGFIARDMPLLDDY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK LC RWYPR Y P+K HRAL DI ESI EL YY+ F
Sbjct: 125 LHYRMVDVSSIKELCRRWYPRIYFGQPAKVMSHRALTDITESIRELAYYRGTAF 178
>gi|386288018|ref|ZP_10065184.1| oligoribonuclease [gamma proteobacterium BDW918]
gi|385278997|gb|EIF42943.1| oligoribonuclease [gamma proteobacterium BDW918]
Length = 181
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL D I+EIA ++TD L EGP L IHQ E L +M EW H
Sbjct: 7 LIWIDLEMTGLDTLNDHIIEIATVVTDSDLNVLAEGPVLAIHQPDEVLAAMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+V + +T EAE+ + F+ K+V + GNS+ D F+ + MP+L + F
Sbjct: 67 ESGLVKRVQDTCITALEAERLTLAFLDKHVEKGASPMCGNSICQDRRFMAREMPELEAFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVSS+K L RW P + K K H ALDDIR+SI EL+YY+E+ +
Sbjct: 127 HYRNLDVSSVKELARRWRP-ELMKGLKKSGAHLALDDIRDSIAELQYYREHFIR 179
>gi|266706193|gb|ACY78400.1| OrnA [Streptomyces chattanoogensis]
Length = 206
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI E L +M E + H
Sbjct: 5 MVWIDCEMTGLSLANDALIEVAALVTDSELNVLGDGVDVVIRPPAEALTTMPEVVRAMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG--TYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T +AE QV+ +++++V PL GNSV D FL + MP L +
Sbjct: 65 ASGLLDE-LDRGTTLEDAEAQVLAYIRQHVPEPGKAPL-CGNSVGTDRGFLLRDMPTLEN 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 YLHYRIVDVSSVKELARRWYPRAYFNSPDKSGNHRALADIRESIAELRYYREAVF 177
>gi|261364839|ref|ZP_05977722.1| oligoribonuclease [Neisseria mucosa ATCC 25996]
gi|288566880|gb|EFC88440.1| oligoribonuclease [Neisseria mucosa ATCC 25996]
Length = 182
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L W+D+EMTGL E +RI+E+A IITD L + V+HQ+ E LD M EW H
Sbjct: 8 LCWLDMEMTGLDPERERIIEVAMIITDSDLNVLAQSEVYVVHQSDELLDGMDEWNTATHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT++V S LTE E E+++++F+ + + + GNS++ D F+ KYMP L + F
Sbjct: 68 RTGLTRRVRESQLTEAEVEQKLLDFIAQWIPEKATPMCGNSIHQDRRFMVKYMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + V K H+ALDDI ESI E++YY+EN K
Sbjct: 128 HYRNLDVSTLKELAKRWNPPVAKGV-VKRGSHQALDDILESIEEMRYYRENFLK 180
>gi|425897203|ref|ZP_18873794.1| oligoribonuclease [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397884019|gb|EJL00505.1| oligoribonuclease [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 180
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ+ E L M EW H
Sbjct: 7 LIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHQSDEVLAGMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M L S F
Sbjct: 67 GSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMKALESYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D R K H ALDDIRESI EL++Y+++ K
Sbjct: 127 HYRNLDVSTLKELAARWAP-DVRDSFKKGSTHLALDDIRESIAELQHYRKHFIK 179
>gi|333990034|ref|YP_004522648.1| oligoribonuclease Orn [Mycobacterium sp. JDM601]
gi|333486002|gb|AEF35394.1| oligoribonuclease Orn [Mycobacterium sp. JDM601]
Length = 218
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TDG+L +G D+VIH LD+M + + H
Sbjct: 8 LVWIDCEMTGLDLGSDKLIEIAALVTDGELNILGDGIDVVIHADDADLDAMSDVVTDMHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL +V S + AEK V+++V+ +V T LAGNS+ D FL + M L
Sbjct: 68 RSGLIDEVRASTVDLATAEKMVLDYVRTHVKQAKTAPLAGNSIGTDRGFLARDMTALDDY 127
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P K HRAL DI ESI ELK+Y+ F
Sbjct: 128 LHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKFYRRTAF 181
>gi|408678299|ref|YP_006878126.1| 3-to-5 oligoribonuclease [Streptomyces venezuelae ATCC 10712]
gi|328882628|emb|CCA55867.1| 3-to-5 oligoribonuclease [Streptomyces venezuelae ATCC 10712]
Length = 200
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGDGVDIVIRPPDAALETMPEIVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL L G T +AE QV+ +++++V PL GNSV D FL + MP L S
Sbjct: 65 ASGLLD-ALAGGTTLADAEAQVLAYIREHVKEPGKAPL-CGNSVSTDRGFLARDMPALES 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 HLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVF 177
>gi|386825807|ref|ZP_10112924.1| oligoribonuclease [Serratia plymuthica PRI-2C]
gi|386377266|gb|EIJ18086.1| oligoribonuclease [Serratia plymuthica PRI-2C]
Length = 181
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLGLMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R AE + + F+++ V + GNS+ D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASRFDDRAAELETIAFLQQWVPAGKSPICGNSIGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ K+ H+A+DDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPQILSGF-KKQGTHQAMDDIRESVAELAYYREHFIQ 180
>gi|124268095|ref|YP_001022099.1| oligoribonuclease [Methylibium petroleiphilum PM1]
gi|124260870|gb|ABM95864.1| putative oligoribonuclease protein [Methylibium petroleiphilum PM1]
Length = 191
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD LT +EGP +HQ+ LD+M W + H
Sbjct: 18 LIWIDLEMTGLDPLNDRIIEIAVVVTDPGLTVRIEGPVFAVHQSDAVLDAMDAWNKGTHG 77
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + E AE+QV+EF+K V ++GNS+ D FL K MP L + F
Sbjct: 78 RSGLIDRVKASTVDEAAAERQVIEFLKAYVPAGKSPMSGNSICQDRRFLAKDMPALETFF 137
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L RW P K Q H AL DI ESI EL YY+E+
Sbjct: 138 HYRNLDVSTLKELARRWKPAILDGF-KKAQAHTALADIHESIDELAYYREHFL 189
>gi|383934271|ref|ZP_09987713.1| oligoribonuclease [Rheinheimera nanhaiensis E407-8]
gi|383704727|dbj|GAB57804.1| oligoribonuclease [Rheinheimera nanhaiensis E407-8]
Length = 182
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 102/174 (58%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ + D ILE+A I+TD +L EGP I Q E LD+M WC H
Sbjct: 8 LIWLDLEMTGLEPKTDVILEMATIVTDSQLNIIAEGPVFAIKQPDEVLDNMSAWCVEQHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT + S + AE+Q + F+ + V + GNS+ D FL +Y P+L + F
Sbjct: 68 KSGLTARCRASTTSLAAAEQQTIAFLSQYVAKGKSPMCGNSIGQDRRFLAEYAPELEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW+P KV K H ALDDIRESI EL Y+ + FK
Sbjct: 128 HYRNLDVSTVKELARRWHPEVLNKV-QKAGSHLALDDIRESIAELVTYRTHFFK 180
>gi|304396962|ref|ZP_07378842.1| Exonuclease RNase T and DNA polymerase III [Pantoea sp. aB]
gi|308188276|ref|YP_003932407.1| oligoribonuclease [Pantoea vagans C9-1]
gi|440761030|ref|ZP_20940128.1| 3'-to-5' oligoribonuclease (orn) [Pantoea agglomerans 299R]
gi|304355758|gb|EFM20125.1| Exonuclease RNase T and DNA polymerase III [Pantoea sp. aB]
gi|308058786|gb|ADO10958.1| oligoribonuclease [Pantoea vagans C9-1]
gi|436425218|gb|ELP22957.1| 3'-to-5' oligoribonuclease (orn) [Pantoea agglomerans 299R]
Length = 182
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 9 LIWIDLEMTGLDPTHDRIIEIATLVTDANLNILAEGPVMAVHQSDAQLALMDEWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + +R AE +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 NSGLVARVKESQIDDRAAELATIEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K H+ALDDIRES+ EL YY+E+ +
Sbjct: 129 HYRYLDVSTLKELARRWKP---EILPGFKKGGTHQALDDIRESVAELAYYREHFLQ 181
>gi|389686479|ref|ZP_10177800.1| oligoribonuclease [Pseudomonas chlororaphis O6]
gi|399004976|ref|ZP_10707577.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM17]
gi|388549940|gb|EIM13212.1| oligoribonuclease [Pseudomonas chlororaphis O6]
gi|398127895|gb|EJM17296.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM17]
Length = 180
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ+ E L M EW H
Sbjct: 7 LIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHQSDEILAGMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M L S F
Sbjct: 67 GSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMKALESYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D R K H ALDDIRESI EL++Y+++ K
Sbjct: 127 HYRNLDVSTLKELAARWAP-DVRDSFKKGSTHLALDDIRESIAELQHYRKHFIK 179
>gi|315604595|ref|ZP_07879658.1| oligoribonuclease [Actinomyces sp. oral taxon 180 str. F0310]
gi|315313607|gb|EFU61661.1| oligoribonuclease [Actinomyces sp. oral taxon 180 str. F0310]
Length = 213
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K PL+WID EMTGL + D ++E+A ++TDG L+ G D++I L++M ++ +N
Sbjct: 8 KDPLIWIDCEMTGLDVANDALIEVAVVVTDGDLSIVDPGMDVLITPPACALENMNDFVRN 67
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDL 186
H +SGL ++ SG++ EA +QV+ ++K+ V LLAGNSV D MFL+ MP +
Sbjct: 68 MHTSSGLLTELARSGVSMEEATEQVLSYIKRFVPQPGKALLAGNSVGTDKMFLEANMPSV 127
Query: 187 ASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ LVDVSSIK L RWY + + P K HRAL DI ESI EL+YY+ +F
Sbjct: 128 IEHLHYRLVDVSSIKELAKRWYRSAFAEAPVKHGGHRALADILESIQELEYYRRVLF 184
>gi|78065664|ref|YP_368433.1| oligoribonuclease [Burkholderia sp. 383]
gi|123569006|sp|Q39IC7.1|ORN_BURS3 RecName: Full=Oligoribonuclease
gi|77966409|gb|ABB07789.1| Exonuclease [Burkholderia sp. 383]
Length = 206
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++
Sbjct: 17 ELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKS 76
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGL +V S +TE EA +Q+ F+ + V + GNS+ D F+ ++MP+
Sbjct: 77 THGRSGLIDRVRASTVTEAEAAEQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFE 136
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
F + +DVS++K LC RW P Y+ K H AL DI ESI ELKYY+E+
Sbjct: 137 RFFHYRNLDVSTLKELCRRWQPAIYKGF-QKRAMHTALADIHESIDELKYYREHFL 191
>gi|317049763|ref|YP_004117411.1| exonuclease RNase T and DNA polymerase III [Pantoea sp. At-9b]
gi|316951380|gb|ADU70855.1| Exonuclease RNase T and DNA polymerase III [Pantoea sp. At-9b]
Length = 182
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 103/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 9 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVMAVHQSDAQLALMDDWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + AE +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 NSGLVDRVKASQFDDHAAELATIEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D K H+ALDDIRES+ EL YY+E+ +
Sbjct: 129 HYRYLDVSTLKELARRWKP-DILPGFKKSGSHQALDDIRESVAELAYYREHFLQ 181
>gi|254823127|ref|ZP_05228128.1| oligoribonuclease [Mycobacterium intracellulare ATCC 13950]
gi|379746471|ref|YP_005337292.1| oligoribonuclease [Mycobacterium intracellulare ATCC 13950]
gi|379753742|ref|YP_005342414.1| oligoribonuclease [Mycobacterium intracellulare MOTT-02]
gi|379760933|ref|YP_005347330.1| oligoribonuclease [Mycobacterium intracellulare MOTT-64]
gi|387874867|ref|YP_006305171.1| oligoribonuclease [Mycobacterium sp. MOTT36Y]
gi|406029868|ref|YP_006728759.1| oligoribonuclease [Mycobacterium indicus pranii MTCC 9506]
gi|443304795|ref|ZP_21034583.1| oligoribonuclease [Mycobacterium sp. H4Y]
gi|378798835|gb|AFC42971.1| oligoribonuclease [Mycobacterium intracellulare ATCC 13950]
gi|378803958|gb|AFC48093.1| oligoribonuclease [Mycobacterium intracellulare MOTT-02]
gi|378808875|gb|AFC53009.1| oligoribonuclease [Mycobacterium intracellulare MOTT-64]
gi|386788325|gb|AFJ34444.1| oligoribonuclease [Mycobacterium sp. MOTT36Y]
gi|405128415|gb|AFS13670.1| Oligoribonuclease [Mycobacterium indicus pranii MTCC 9506]
gi|442766359|gb|ELR84353.1| oligoribonuclease [Mycobacterium sp. H4Y]
Length = 215
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D+++EIA ++TD L +G D+VIH L +MG+ H
Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVIHADDAALSAMGDVVTEMHS 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL +V S + AE V++++ ++V T LAGNS+ D F+ + MP L +
Sbjct: 65 RSGLIDEVRASAVDLATAEAMVLDYIGQHVKQPKTAPLAGNSIATDRAFIVRDMPALDTY 124
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ ++DVSSIK LC RWYPR Y P+K HRAL DI ESI EL++Y+ F
Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPTKGLAHRALADIHESIRELQFYRRTAF 178
>gi|221133715|ref|ZP_03560020.1| oligoribonuclease [Glaciecola sp. HTCC2999]
Length = 191
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 115/188 (61%), Gaps = 1/188 (0%)
Query: 57 QNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 116
Q+S E ++ L+WID+EMTGL E +LEIA I+TD +L EGP + I+Q +
Sbjct: 4 QHSSHVSEHYHEQNLIWIDMEMTGLDPEECVVLEIATIVTDAQLNILAEGPVIAIYQPDD 63
Query: 117 CLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDF 176
L +M EWC H +GLT++ S + EA+ + + F++ V T L GN++ D
Sbjct: 64 VLANMNEWCIETHGKTGLTQRCRESKYSVEEAQAETIAFLQAYVPERTSPLCGNTIGQDR 123
Query: 177 MFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELK 236
F+ KYMP+L + + +DVS+IK L +RW P+ + K+ H ALDDIRESI EL+
Sbjct: 124 RFMVKYMPELEAYCHYRSIDVSTIKELAVRWKPQVLKGF-RKKGVHLALDDIRESISELQ 182
Query: 237 YYKENIFK 244
YY+E++FK
Sbjct: 183 YYREHVFK 190
>gi|257094889|ref|YP_003168530.1| Exonuclease RNase T and DNA polymerase III [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047413|gb|ACV36601.1| Exonuclease RNase T and DNA polymerase III [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 181
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E +RI+E+A +ITDG+L E P VIHQ CLD+M EW + H
Sbjct: 8 LVWLDMEMTGLDPERERIIELAIVITDGQLATLAESPAWVIHQDDTCLDAMDEWNRKTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S L E E + FV++ V + L GNSV D F+ KY+P + F
Sbjct: 68 RSGLIERVRVSALDEVAVEAAALAFVQEWVPQASSPLCGNSVGQDRRFMVKYLPQFEAWF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P + K K+ H AL DIRESI ELKYY+E+ +
Sbjct: 128 HYRNLDVSTLKELCRRWKP-ELAKGFVKKADHTALGDIRESIEELKYYREHFIR 180
>gi|255068356|ref|ZP_05320211.1| oligoribonuclease [Neisseria sicca ATCC 29256]
gi|255047405|gb|EET42869.1| oligoribonuclease [Neisseria sicca ATCC 29256]
Length = 185
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L W+D+EMTGL E +RI+E+A IITD L + V+HQ+ E LD M EW H
Sbjct: 8 LCWLDMEMTGLDPERERIIEVAMIITDSDLNVLAQSEVYVVHQSDELLDGMDEWNTATHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT++V S LTE E E+++++F+ + + + GNS++ D F+ KYMP L + F
Sbjct: 68 RTGLTQRVRESQLTEAEVEQKLLDFIAQWIPEKATPMCGNSIHQDRRFMVKYMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + V K H+ALDDI ESI E++YY+EN K
Sbjct: 128 HYRNLDVSTLKELAKRWNPPVAKGV-VKRGSHQALDDILESIEEMRYYRENFLK 180
>gi|381161124|ref|ZP_09870355.1| oligoribonuclease (3'->5' exoribonuclease) [Thiorhodovibrio sp.
970]
gi|380877360|gb|EIC19453.1| oligoribonuclease (3'->5' exoribonuclease) [Thiorhodovibrio sp.
970]
Length = 182
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL DRILE+A IITD +L EGP + I Q++E L +M +W + HH
Sbjct: 8 LIWMDLEMTGLDPFTDRILEMAVIITDSQLKVVAEGPCIAIRQSEEVLAAMDDWNREHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S E EAE++++ F++++ L GNS+ D FL ++MP L + F
Sbjct: 68 ESGLIERVRFSESDEAEAEQEMLRFLQRHCQAGKSPLCGNSICQDRRFLARFMPRLEAFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L RW P K+ +H+AL DIRESI ELK+Y+ + +
Sbjct: 128 HYRNLDVSTLKILAQRWAPAVVDGF-KKDNRHQALADIRESITELKHYRAEFLRVD 182
>gi|259907169|ref|YP_002647525.1| oligoribonuclease [Erwinia pyrifoliae Ep1/96]
gi|387869893|ref|YP_005801263.1| oligoribonuclease [Erwinia pyrifoliae DSM 12163]
gi|224962791|emb|CAX54246.1| Oligoribonuclease [Erwinia pyrifoliae Ep1/96]
gi|283476976|emb|CAY72863.1| oligoribonuclease [Erwinia pyrifoliae DSM 12163]
Length = 193
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP +HQ+ L M EW H
Sbjct: 14 LIWIDLEMTGLNPEQDRIIEIATLVTDADLNILAEGPVFAVHQSDAQLGLMDEWNVRTHT 73
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE + F+++ V + + GNS+ D FL KYMP+L + F
Sbjct: 74 NSGLVERVKASQVDDRAAELATIAFLQQWVPANSSPICGNSIGQDRRFLFKYMPELEAYF 133
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 134 HYRYLDVSTLKELARRWKPEILAGF-KKQGAHQALDDIRESVAELAYYREHFIQ 186
>gi|70734062|ref|YP_257702.1| oligoribonuclease [Pseudomonas protegens Pf-5]
gi|85542915|sp|Q4KJ81.1|ORN_PSEF5 RecName: Full=Oligoribonuclease
gi|68348361|gb|AAY95967.1| oligoribonuclease [Pseudomonas protegens Pf-5]
Length = 180
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ+ E L M EW H
Sbjct: 7 LIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHQSDEILAGMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M L S F
Sbjct: 67 GSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMKALESYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D R K H ALDDIRESI EL++Y+++ K
Sbjct: 127 HYRNLDVSTLKELAARWAP-DVRDSFKKGSTHLALDDIRESIAELQHYRKHFIK 179
>gi|421484118|ref|ZP_15931690.1| oligoribonuclease [Achromobacter piechaudii HLE]
gi|400197825|gb|EJO30789.1| oligoribonuclease [Achromobacter piechaudii HLE]
Length = 181
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL+ E +RI+E+A ++T+ LT EGP LVIHQ LD+M W ++ H
Sbjct: 8 LVWLDMEMTGLEPEKERIIEVAVVVTEPDLTVVAEGPVLVIHQPDSLLDAMDNWNKSTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S ++E +AE ++ F+ ++V L GN++ D F+ YMP L F
Sbjct: 68 KSGLIDKVKASTVSEAQAEDTLLAFLAQHVPAGKSPLCGNTISQDRRFMFAYMPRLEQFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P Y+ K+ +H AL DI ESI ELKYY+E+ K
Sbjct: 128 HYRNLDVSTLKELARRWAPAVYKGF-EKKSRHEALADIYESIDELKYYREHFLKV 181
>gi|456384861|gb|EMF50439.1| ornA protein [Streptomyces bottropensis ATCC 25435]
Length = 200
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGDGVDIVIRPPDPALETMPEVVREMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
ASGL L G T +AE QV+ +V+++V L GN+V D FL + MP L S
Sbjct: 65 ASGLLD-ALAGGTTLADAEAQVLAYVREHVKEPRKAPLCGNTVGTDRGFLLRDMPTLESH 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E IF
Sbjct: 124 LHYRIVDVSSIKELARRWYPRAYFNSPQKNGNHRALADIRESIAELRYYREAIF 177
>gi|152985597|ref|YP_001350999.1| oligoribonuclease [Pseudomonas aeruginosa PA7]
gi|452880474|ref|ZP_21957444.1| oligoribonuclease [Pseudomonas aeruginosa VRFPA01]
gi|166216274|sp|A6VD64.1|ORN_PSEA7 RecName: Full=Oligoribonuclease
gi|150960755|gb|ABR82780.1| oligoribonuclease [Pseudomonas aeruginosa PA7]
gi|452183098|gb|EME10116.1| oligoribonuclease [Pseudomonas aeruginosa VRFPA01]
Length = 180
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ +E L M EW H
Sbjct: 7 LIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEVLAGMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++ EAE Q + F+++ V + + GNS+ D FL ++MP L F
Sbjct: 67 QSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMPRLEGYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ R+ K H ALDDIRESI EL++Y+++ K
Sbjct: 127 HYRNLDVSTLKELAARWAPQ-VRESFKKGNTHLALDDIRESIAELRHYRDHFIK 179
>gi|443471099|ref|ZP_21061172.1| 3'-to-5' oligoribonuclease (orn) [Pseudomonas pseudoalcaligenes
KF707]
gi|442901002|gb|ELS27001.1| 3'-to-5' oligoribonuclease (orn) [Pseudomonas pseudoalcaligenes
KF707]
Length = 180
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ+ E L M EW H
Sbjct: 7 LIWIDLEMTGLDPDSDVIIEMATIVTDSDLNVLAEGPVIAIHQSDEILAGMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + EAE Q + F+++ V + GNS+ D FL + MP L + F
Sbjct: 67 QSGLTQRVRESRIDTAEAEAQTLAFLEQWVPKGKSPICGNSICQDRRFLYRRMPKLEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P R K H A+DDIR+SI ELK+Y+E+ FK
Sbjct: 127 HYRNLDVSTVKELAARWAP-TVRDGVRKSSSHLAMDDIRDSIAELKHYREHFFK 179
>gi|50843110|ref|YP_056337.1| oligoribonuclease [Propionibacterium acnes KPA171202]
gi|386024580|ref|YP_005942885.1| oligoribonuclease [Propionibacterium acnes 266]
gi|407936032|ref|YP_006851674.1| oligoribonuclease [Propionibacterium acnes C1]
gi|422395253|ref|ZP_16475293.1| oligoribonuclease [Propionibacterium acnes HL097PA1]
gi|422427576|ref|ZP_16504492.1| exonuclease [Propionibacterium acnes HL087PA1]
gi|422430473|ref|ZP_16507353.1| exonuclease [Propionibacterium acnes HL072PA2]
gi|422432458|ref|ZP_16509327.1| exonuclease [Propionibacterium acnes HL059PA2]
gi|422434377|ref|ZP_16511237.1| exonuclease [Propionibacterium acnes HL083PA2]
gi|422444134|ref|ZP_16520929.1| exonuclease [Propionibacterium acnes HL002PA1]
gi|422447168|ref|ZP_16523906.1| exonuclease [Propionibacterium acnes HL027PA1]
gi|422449500|ref|ZP_16526224.1| exonuclease [Propionibacterium acnes HL036PA3]
gi|422451214|ref|ZP_16527917.1| exonuclease [Propionibacterium acnes HL030PA2]
gi|422453368|ref|ZP_16530064.1| exonuclease [Propionibacterium acnes HL087PA3]
gi|422456005|ref|ZP_16532673.1| exonuclease [Propionibacterium acnes HL030PA1]
gi|422480126|ref|ZP_16556530.1| exonuclease [Propionibacterium acnes HL063PA1]
gi|422481207|ref|ZP_16557607.1| exonuclease [Propionibacterium acnes HL036PA1]
gi|422487280|ref|ZP_16563612.1| exonuclease [Propionibacterium acnes HL013PA2]
gi|422491249|ref|ZP_16567563.1| exonuclease [Propionibacterium acnes HL020PA1]
gi|422495369|ref|ZP_16571658.1| exonuclease [Propionibacterium acnes HL025PA1]
gi|422496932|ref|ZP_16573209.1| exonuclease [Propionibacterium acnes HL002PA3]
gi|422499564|ref|ZP_16575828.1| exonuclease [Propionibacterium acnes HL063PA2]
gi|422503123|ref|ZP_16579364.1| exonuclease [Propionibacterium acnes HL027PA2]
gi|422505594|ref|ZP_16581824.1| exonuclease [Propionibacterium acnes HL036PA2]
gi|422507099|ref|ZP_16583317.1| exonuclease [Propionibacterium acnes HL046PA2]
gi|422509830|ref|ZP_16585981.1| exonuclease [Propionibacterium acnes HL059PA1]
gi|422513011|ref|ZP_16589138.1| exonuclease [Propionibacterium acnes HL087PA2]
gi|422533581|ref|ZP_16609512.1| exonuclease [Propionibacterium acnes HL072PA1]
gi|422540142|ref|ZP_16616011.1| exonuclease [Propionibacterium acnes HL013PA1]
gi|422542139|ref|ZP_16617991.1| exonuclease [Propionibacterium acnes HL037PA1]
gi|422547034|ref|ZP_16622856.1| exonuclease [Propionibacterium acnes HL050PA3]
gi|422548706|ref|ZP_16624518.1| exonuclease [Propionibacterium acnes HL050PA1]
gi|422551301|ref|ZP_16627096.1| exonuclease [Propionibacterium acnes HL005PA3]
gi|422555663|ref|ZP_16631431.1| exonuclease [Propionibacterium acnes HL005PA2]
gi|422557034|ref|ZP_16632779.1| exonuclease [Propionibacterium acnes HL025PA2]
gi|422564027|ref|ZP_16639699.1| exonuclease [Propionibacterium acnes HL046PA1]
gi|422566945|ref|ZP_16642573.1| exonuclease [Propionibacterium acnes HL002PA2]
gi|422571083|ref|ZP_16646676.1| exonuclease [Propionibacterium acnes HL067PA1]
gi|422579323|ref|ZP_16654845.1| exonuclease [Propionibacterium acnes HL005PA4]
gi|81826407|sp|Q6A786.1|ORN_PROAC RecName: Full=Oligoribonuclease
gi|50840712|gb|AAT83379.1| oligoribonuclease [Propionibacterium acnes KPA171202]
gi|313763467|gb|EFS34831.1| exonuclease [Propionibacterium acnes HL013PA1]
gi|313808072|gb|EFS46553.1| exonuclease [Propionibacterium acnes HL087PA2]
gi|313813519|gb|EFS51233.1| exonuclease [Propionibacterium acnes HL025PA1]
gi|313816648|gb|EFS54362.1| exonuclease [Propionibacterium acnes HL059PA1]
gi|313819642|gb|EFS57356.1| exonuclease [Propionibacterium acnes HL046PA2]
gi|313822034|gb|EFS59748.1| exonuclease [Propionibacterium acnes HL036PA1]
gi|313823730|gb|EFS61444.1| exonuclease [Propionibacterium acnes HL036PA2]
gi|313826052|gb|EFS63766.1| exonuclease [Propionibacterium acnes HL063PA1]
gi|313829524|gb|EFS67238.1| exonuclease [Propionibacterium acnes HL063PA2]
gi|314914829|gb|EFS78660.1| exonuclease [Propionibacterium acnes HL005PA4]
gi|314919419|gb|EFS83250.1| exonuclease [Propionibacterium acnes HL050PA1]
gi|314920674|gb|EFS84505.1| exonuclease [Propionibacterium acnes HL050PA3]
gi|314924777|gb|EFS88608.1| exonuclease [Propionibacterium acnes HL036PA3]
gi|314930554|gb|EFS94385.1| exonuclease [Propionibacterium acnes HL067PA1]
gi|314954492|gb|EFS98898.1| exonuclease [Propionibacterium acnes HL027PA1]
gi|314957575|gb|EFT01678.1| exonuclease [Propionibacterium acnes HL002PA1]
gi|314961982|gb|EFT06083.1| exonuclease [Propionibacterium acnes HL002PA2]
gi|314968385|gb|EFT12483.1| exonuclease [Propionibacterium acnes HL037PA1]
gi|314978912|gb|EFT23006.1| exonuclease [Propionibacterium acnes HL072PA2]
gi|314986647|gb|EFT30739.1| exonuclease [Propionibacterium acnes HL005PA2]
gi|314991003|gb|EFT35094.1| exonuclease [Propionibacterium acnes HL005PA3]
gi|315083650|gb|EFT55626.1| exonuclease [Propionibacterium acnes HL027PA2]
gi|315087019|gb|EFT58995.1| exonuclease [Propionibacterium acnes HL002PA3]
gi|315089194|gb|EFT61170.1| exonuclease [Propionibacterium acnes HL072PA1]
gi|315099093|gb|EFT71069.1| exonuclease [Propionibacterium acnes HL059PA2]
gi|315100423|gb|EFT72399.1| exonuclease [Propionibacterium acnes HL046PA1]
gi|315106884|gb|EFT78860.1| exonuclease [Propionibacterium acnes HL030PA1]
gi|315109117|gb|EFT81093.1| exonuclease [Propionibacterium acnes HL030PA2]
gi|327334124|gb|EGE75838.1| oligoribonuclease [Propionibacterium acnes HL097PA1]
gi|327446295|gb|EGE92949.1| exonuclease [Propionibacterium acnes HL013PA2]
gi|327454846|gb|EGF01501.1| exonuclease [Propionibacterium acnes HL087PA3]
gi|327457869|gb|EGF04524.1| exonuclease [Propionibacterium acnes HL083PA2]
gi|328752440|gb|EGF66056.1| exonuclease [Propionibacterium acnes HL020PA1]
gi|328755323|gb|EGF68939.1| exonuclease [Propionibacterium acnes HL087PA1]
gi|328758196|gb|EGF71812.1| exonuclease [Propionibacterium acnes HL025PA2]
gi|332676038|gb|AEE72854.1| oligoribonuclease [Propionibacterium acnes 266]
gi|407904613|gb|AFU41443.1| oligoribonuclease [Propionibacterium acnes C1]
Length = 202
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TDG+L EG D++I + LD M ++ +N H
Sbjct: 2 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 61
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-----LAGNSVYVDFMFLKKYMPD 185
SGL + L GLT +A+ QV+++++ TY P LAGN++ D FL K MP
Sbjct: 62 TSGLLAE-LDKGLTMAQAQDQVLDYIR----TYVPQAGKAPLAGNTIGTDRSFLAKDMPK 116
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
L S + VDVSSIK L RWYPR + P K+ HRAL DI+ESI EL Y++E
Sbjct: 117 LESYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWRE 171
>gi|385786069|ref|YP_005817178.1| oligoribonuclease [Erwinia sp. Ejp617]
gi|310765341|gb|ADP10291.1| Oligoribonuclease [Erwinia sp. Ejp617]
Length = 187
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP +HQ+ L M EW H
Sbjct: 8 LIWIDLEMTGLNPEQDRIIEIATLVTDADLNILAEGPVFAVHQSDAQLGLMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE + F+++ V + + GNS+ D FL KYMP+L + F
Sbjct: 68 NSGLVERVKASQVDDRAAELATIAFLQQWVPANSSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQGAHQALDDIRESVAELAYYREHFIQ 180
>gi|422385430|ref|ZP_16465562.1| oligoribonuclease [Propionibacterium acnes HL096PA3]
gi|327329611|gb|EGE71367.1| oligoribonuclease [Propionibacterium acnes HL096PA3]
Length = 202
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TDG+L EG D++I + LD M ++ +N H
Sbjct: 2 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 61
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-----LAGNSVYVDFMFLKKYMPD 185
SGL + L GLT +A+ QV+++++ TY P LAGN++ D FL K MP
Sbjct: 62 TSGLLAE-LDKGLTMAQAQDQVLDYIR----TYVPQAGKAPLAGNTIGTDRSFLAKDMPK 116
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
L S + VDVSSIK L RWYPR + P K+ HRAL DI+ESI EL Y++E
Sbjct: 117 LESYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWRE 171
>gi|294669159|ref|ZP_06734240.1| oligoribonuclease [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308903|gb|EFE50146.1| oligoribonuclease [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 185
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L W+D+EMTGL E +RI+E+A IITD L + V+HQ+ E LD M W H
Sbjct: 8 LCWLDMEMTGLDPERERIIEVAMIITDSDLNVLAQSEVYVVHQSDELLDGMDAWNTATHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT++V S LTE E E+++++F+ + + + + GNS++ D F+ KYMP L + F
Sbjct: 68 RTGLTQRVRESQLTEAEVEQKLLDFIAQWIPEKSTPMCGNSIHQDRRFMVKYMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW+P + V K H+ALDDI ESI E++YY+EN K
Sbjct: 128 HYRNLDVSTLKELAKRWHPAVAKGV-VKRGSHQALDDILESIEEMRYYRENFLK 180
>gi|170728503|ref|YP_001762529.1| oligoribonuclease [Shewanella woodyi ATCC 51908]
gi|169813850|gb|ACA88434.1| Exonuclease RNase T and DNA polymerase III [Shewanella woodyi ATCC
51908]
Length = 181
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL+ +VDRI+EIA I+TD +L EGP + IHQ+ E L M +W + HH
Sbjct: 8 LIWVDLEMTGLEPDVDRIIEIATIVTDKELNIIAEGPVIAIHQSDEQLAKMDDWNKKHHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S +E +A +EF+ ++V + + GNSV D F+ YM +L F
Sbjct: 68 ESGLVDRVRSSQYSEAQAVAMTIEFLSQHVTKGSSPMCGNSVGQDRRFMTLYMRELEDFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P SK H+AL DI+ESI EL+YY+ +FK
Sbjct: 128 HYRNIDVSTVKELVRRWDPEVMNGF-SKLGTHKALIDIQESIAELQYYRAKVFK 180
>gi|148244280|ref|YP_001218974.1| oligoribonuclease [Candidatus Vesicomyosocius okutanii HA]
gi|146326107|dbj|BAF61250.1| oligoribonuclease [Candidatus Vesicomyosocius okutanii HA]
Length = 181
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E D I+EIA I+TD +L +GP L IHQ + L SM +W HH
Sbjct: 8 LIWIDLEMTGLTPEKDVIIEIATIVTDAQLHIIAQGPSLAIHQNDKILTSMNQWNTEHHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL K+V S ++ ++AE ++F+KK V + GN++ D FL YMP L F
Sbjct: 68 NSGLLKRVRKSNVSCKKAEIHTLKFLKKYVNKGASPMCGNTICQDRRFLYNYMPTLEQFF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K L M W P + + V K+ H AL DI++SI ELK+Y+ N+F
Sbjct: 128 HYRHIDVSTLKELIMHWKPNE-KMVFKKDSAHLALSDIQDSIDELKHYR-NVF 178
>gi|388567818|ref|ZP_10154248.1| oligoribonuclease [Hydrogenophaga sp. PBC]
gi|388265147|gb|EIK90707.1| oligoribonuclease [Hydrogenophaga sp. PBC]
Length = 195
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EM+GL E +R+LEIA +IT +LT +EGP +V+HQ+ LD+M W + H
Sbjct: 23 LVWIDCEMSGLDPEKERLLEIAVVITGPQLTPRIEGPVIVVHQSDAVLDAMDAWNKGTHG 82
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S ++E EAE+Q+++F+ + V L GN++ D FL KYMP L +
Sbjct: 83 RSGLIDKVRASAVSEAEAEQQLIDFIARYVPKQASPLCGNTIGQDRRFLVKYMPRLEAYL 142
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ VDVS++K L RW P + K Q H AL D+ ESI EL++Y+ +
Sbjct: 143 HYRNVDVSTLKELAKRWRP-EVVDAFKKRQMHTALADVHESIDELEHYRAQFLR 195
>gi|15600144|ref|NP_253638.1| oligoribonuclease [Pseudomonas aeruginosa PAO1]
gi|107104050|ref|ZP_01367968.1| hypothetical protein PaerPA_01005123 [Pseudomonas aeruginosa PACS2]
gi|116053100|ref|YP_793419.1| oligoribonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894046|ref|YP_002442915.1| oligoribonuclease [Pseudomonas aeruginosa LESB58]
gi|254238334|ref|ZP_04931657.1| oligoribonuclease [Pseudomonas aeruginosa C3719]
gi|254244161|ref|ZP_04937483.1| oligoribonuclease [Pseudomonas aeruginosa 2192]
gi|296391791|ref|ZP_06881266.1| oligoribonuclease [Pseudomonas aeruginosa PAb1]
gi|313109953|ref|ZP_07795880.1| oligoribonuclease [Pseudomonas aeruginosa 39016]
gi|355643065|ref|ZP_09053074.1| hypothetical protein HMPREF1030_02160 [Pseudomonas sp. 2_1_26]
gi|386061122|ref|YP_005977644.1| oligoribonuclease [Pseudomonas aeruginosa M18]
gi|386063540|ref|YP_005978844.1| oligoribonuclease [Pseudomonas aeruginosa NCGM2.S1]
gi|392986627|ref|YP_006485214.1| oligoribonuclease [Pseudomonas aeruginosa DK2]
gi|416858311|ref|ZP_11913250.1| oligoribonuclease [Pseudomonas aeruginosa 138244]
gi|416877076|ref|ZP_11919617.1| oligoribonuclease [Pseudomonas aeruginosa 152504]
gi|418586307|ref|ZP_13150350.1| oligoribonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|418591829|ref|ZP_13155716.1| oligoribonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|419751804|ref|ZP_14278214.1| oligoribonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|420142149|ref|ZP_14649775.1| oligoribonuclease [Pseudomonas aeruginosa CIG1]
gi|421156470|ref|ZP_15615916.1| oligoribonuclease [Pseudomonas aeruginosa ATCC 14886]
gi|421177206|ref|ZP_15634862.1| oligoribonuclease [Pseudomonas aeruginosa CI27]
gi|421183030|ref|ZP_15640497.1| oligoribonuclease [Pseudomonas aeruginosa E2]
gi|421519515|ref|ZP_15966186.1| oligoribonuclease [Pseudomonas aeruginosa PAO579]
gi|424944257|ref|ZP_18360020.1| oligoribonuclease [Pseudomonas aeruginosa NCMG1179]
gi|451982637|ref|ZP_21930943.1| 3'-to-5' oligoribonuclease (orn) [Pseudomonas aeruginosa 18A]
gi|11386963|sp|P57665.1|ORN_PSEAE RecName: Full=Oligoribonuclease
gi|122256887|sp|Q02F67.1|ORN_PSEAB RecName: Full=Oligoribonuclease
gi|9951232|gb|AAG08336.1|AE004908_2 oligoribonuclease [Pseudomonas aeruginosa PAO1]
gi|115588321|gb|ABJ14336.1| oligoribonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170265|gb|EAZ55776.1| oligoribonuclease [Pseudomonas aeruginosa C3719]
gi|126197539|gb|EAZ61602.1| oligoribonuclease [Pseudomonas aeruginosa 2192]
gi|218774274|emb|CAW30091.1| oligoribonuclease [Pseudomonas aeruginosa LESB58]
gi|310882382|gb|EFQ40976.1| oligoribonuclease [Pseudomonas aeruginosa 39016]
gi|334839590|gb|EGM18269.1| oligoribonuclease [Pseudomonas aeruginosa 138244]
gi|334840015|gb|EGM18681.1| oligoribonuclease [Pseudomonas aeruginosa 152504]
gi|346060703|dbj|GAA20586.1| oligoribonuclease [Pseudomonas aeruginosa NCMG1179]
gi|347307428|gb|AEO77542.1| oligoribonuclease [Pseudomonas aeruginosa M18]
gi|348032099|dbj|BAK87459.1| oligoribonuclease [Pseudomonas aeruginosa NCGM2.S1]
gi|354830065|gb|EHF14124.1| hypothetical protein HMPREF1030_02160 [Pseudomonas sp. 2_1_26]
gi|375043313|gb|EHS35942.1| oligoribonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|375049366|gb|EHS41866.1| oligoribonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|384401880|gb|EIE48233.1| oligoribonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|392322132|gb|AFM67512.1| oligoribonuclease [Pseudomonas aeruginosa DK2]
gi|403245098|gb|EJY58928.1| oligoribonuclease [Pseudomonas aeruginosa CIG1]
gi|404345434|gb|EJZ71786.1| oligoribonuclease [Pseudomonas aeruginosa PAO579]
gi|404519014|gb|EKA29803.1| oligoribonuclease [Pseudomonas aeruginosa ATCC 14886]
gi|404529850|gb|EKA39870.1| oligoribonuclease [Pseudomonas aeruginosa CI27]
gi|404540946|gb|EKA50326.1| oligoribonuclease [Pseudomonas aeruginosa E2]
gi|451759729|emb|CCQ83466.1| 3'-to-5' oligoribonuclease (orn) [Pseudomonas aeruginosa 18A]
gi|453046461|gb|EME94177.1| oligoribonuclease [Pseudomonas aeruginosa PA21_ST175]
Length = 180
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ +E L M EW H
Sbjct: 7 LIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEILAGMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++ EAE Q + F+++ V + + GNS+ D FL ++MP L F
Sbjct: 67 QSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMPRLEGYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ R+ K H ALDDIRESI EL++Y+++ K
Sbjct: 127 HYRNLDVSTLKELAARWAPQ-VRESFKKGNTHLALDDIRESIAELRHYRDHFIK 179
>gi|418762874|ref|ZP_13319000.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392735603|gb|EIZ92775.1| oligoribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
Length = 181
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S + ER+AE +EF+K V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +K+ H+A+DDI ES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDICESVAELAYYREHFIK 180
>gi|421081693|ref|ZP_15542602.1| Oligoribonuclease [Pectobacterium wasabiae CFBP 3304]
gi|401703506|gb|EJS93720.1| Oligoribonuclease [Pectobacterium wasabiae CFBP 3304]
Length = 180
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + DRI+EIA ++TD L EGP L +HQ+ L M +W H
Sbjct: 7 LIWIDLEMTGLNPDHDRIIEIATLVTDANLNVLAEGPVLAVHQSDSQLALMDDWNVRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+SGLT +V S ER AE + + F++K V + GNS+ D FL +YMP+L + F
Sbjct: 67 SSGLTDRVKASTTDERAAELETLAFLQKWVPAGKSPICGNSIGQDRRFLFRYMPELEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+EN +
Sbjct: 127 HYRYLDVSTLKELARRWKPEILTGF-KKQGTHQAMDDIRESLAELVYYRENFLR 179
>gi|387126545|ref|YP_006295150.1| 3'-to-5' oligoribonuclease [Methylophaga sp. JAM1]
gi|386273607|gb|AFI83505.1| 3'-to-5' oligoribonuclease (orn) [Methylophaga sp. JAM1]
Length = 183
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL D I+EIA I+TD L EGP + IHQ+ L M EW
Sbjct: 5 KHNLIWIDLEMTGLDTNNDYIIEIATIVTDSDLNILAEGPIIAIHQSDAILAGMDEWNTK 64
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGL +V +S +T +AE++ ++F+KK+V + GNS+ D F+ + MPDL
Sbjct: 65 QHGGSGLADRVRNSIVTVEQAEQETLDFLKKHVPAGISPMCGNSICQDRRFMARLMPDLE 124
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ F + +DVSS K + RW P+ K K+ H A+DDI++SI EL++Y+E++ K
Sbjct: 125 AYFHYRNLDVSSFKEIARRWAPK-VEKSFKKKSSHLAMDDIKDSIRELQHYREHMIKV 181
>gi|320539682|ref|ZP_08039346.1| putative oligoribonuclease [Serratia symbiotica str. Tucson]
gi|320030294|gb|EFW12309.1| putative oligoribonuclease [Serratia symbiotica str. Tucson]
Length = 181
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLGLMDDWNVRTHM 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V S L +R AE + F+++ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVARVKASHLDDRAAEMATIAFLRQWVPAGKSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+A+DDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILNGC-KKQSTHQAMDDIRESVAELAYYREHFIQ 180
>gi|319639353|ref|ZP_07994104.1| oligoribonuclease [Neisseria mucosa C102]
gi|317399537|gb|EFV80207.1| oligoribonuclease [Neisseria mucosa C102]
Length = 185
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L W+D+EMTGL E DRI+E+A IITD L + VIHQ+ E LDSM EW H
Sbjct: 8 LCWLDMEMTGLNPEHDRIIEVAMIITDSDLNVLAQSDVYVIHQSDELLDSMDEWNTATHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT++V S LTE E E+ +++F+ + + + GNS++ D F+ KYMP L + F
Sbjct: 68 RTGLTQRVRESTLTEAEVEQNLLDFMSAWIPEKSTPMCGNSIHQDRRFMVKYMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + V K H+ALDDI ESI E+++Y+E+ K
Sbjct: 128 HYRNLDVSTLKELAKRWNPAVAKSV-VKRGSHKALDDILESIEEMRHYREHFLK 180
>gi|379707522|ref|YP_005262727.1| oligoribonuclease [Nocardia cyriacigeorgica GUH-2]
gi|374845021|emb|CCF62085.1| Oligoribonuclease [Nocardia cyriacigeorgica GUH-2]
Length = 201
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 78 MTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKK 137
MTGL+++ D+++E+A ++TD L +G D+VIH E L +M + H SGLT +
Sbjct: 1 MTGLRLDSDKLIEVAALVTDSDLNILGDGVDIVIHADDEALAAMPPVVADMHARSGLTDE 60
Query: 138 VLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVD 196
V S +T EAE+QV++++++ T T LAGNS+ D F+ + MP L S + ++D
Sbjct: 61 VRRSAVTLEEAEQQVLDYIRQFAPTPGTVPLAGNSIATDRAFIARDMPALDSHLHYRMID 120
Query: 197 VSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
VSSIK LC RWYPR Y P K HRAL DI+ESI EL+YY+ F
Sbjct: 121 VSSIKELCRRWYPRIYFGQPEKGLTHRALADIKESIRELEYYRRTAF 167
>gi|145480843|ref|XP_001426444.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393519|emb|CAK59046.1| unnamed protein product [Paramecium tetraurelia]
Length = 174
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Query: 86 DRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTE 145
DR+ + ACI+TD KL ++GP +VIH K+ LD M EWC H+ASGL ++ L+S +T
Sbjct: 11 DRVEQCACILTDYKLKTIIKGPHIVIHADKQVLDGMDEWCTTTHKASGLYQESLNSTVTV 70
Query: 146 REAEKQVVEFVKKN-VGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALC 204
+A++Q+++F+ +N + LAGNSVY+D +F+ K+MP L + +VDVSSIK LC
Sbjct: 71 GQAQEQILQFLNQNNIPPKVLPLAGNSVYMDRLFVMKHMPQLDQFLHYRIVDVSSIKLLC 130
Query: 205 MRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
P + P K+ HRALDDI ESI EL+YY+E
Sbjct: 131 QNLNPIVCSQQPQKKLNHRALDDILESIEELRYYQE 166
>gi|289426433|ref|ZP_06428176.1| exonuclease [Propionibacterium acnes SK187]
gi|335052957|ref|ZP_08545813.1| oligoribonuclease [Propionibacterium sp. 434-HC2]
gi|342213304|ref|ZP_08706029.1| oligoribonuclease [Propionibacterium sp. CC003-HC2]
gi|354607623|ref|ZP_09025591.1| hypothetical protein HMPREF1003_02158 [Propionibacterium sp.
5_U_42AFAA]
gi|365963303|ref|YP_004944869.1| oligoribonuclease [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965544|ref|YP_004947109.1| oligoribonuclease [Propionibacterium acnes TypeIA2 P.acn17]
gi|365974478|ref|YP_004956037.1| oligoribonuclease [Propionibacterium acnes TypeIA2 P.acn33]
gi|387504015|ref|YP_005945244.1| oligoribonuclease [Propionibacterium acnes 6609]
gi|419421753|ref|ZP_13961981.1| oligoribonuclease [Propionibacterium acnes PRP-38]
gi|289153161|gb|EFD01879.1| exonuclease [Propionibacterium acnes SK187]
gi|333768318|gb|EGL45510.1| oligoribonuclease [Propionibacterium sp. 434-HC2]
gi|335278060|gb|AEH29965.1| oligoribonuclease [Propionibacterium acnes 6609]
gi|340768848|gb|EGR91373.1| oligoribonuclease [Propionibacterium sp. CC003-HC2]
gi|353556169|gb|EHC25540.1| hypothetical protein HMPREF1003_02158 [Propionibacterium sp.
5_U_42AFAA]
gi|365739984|gb|AEW84186.1| oligoribonuclease [Propionibacterium acnes TypeIA2 P.acn31]
gi|365742225|gb|AEW81919.1| oligoribonuclease [Propionibacterium acnes TypeIA2 P.acn17]
gi|365744477|gb|AEW79674.1| oligoribonuclease [Propionibacterium acnes TypeIA2 P.acn33]
gi|379978244|gb|EIA11569.1| oligoribonuclease [Propionibacterium acnes PRP-38]
Length = 205
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TDG+L EG D++I + LD M ++ +N H
Sbjct: 5 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-----LAGNSVYVDFMFLKKYMPD 185
SGL + L GLT +A+ QV+++++ TY P LAGN++ D FL K MP
Sbjct: 65 TSGLLAE-LDKGLTMAQAQDQVLDYIR----TYVPQAGKAPLAGNTIGTDRSFLAKDMPK 119
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
L S + VDVSSIK L RWYPR + P K+ HRAL DI+ESI EL Y++E
Sbjct: 120 LESYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWRE 174
>gi|411005618|ref|ZP_11381947.1| oligoribonuclease [Streptomyces globisporus C-1027]
Length = 201
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T +AE+QV+ +V+++V PL GNSV D FL + M DL S
Sbjct: 65 ASGLLDE-LAGGTTLADAEEQVLAYVREHVKEPGKAPL-CGNSVGTDRGFLARDMRDLES 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RW+PR Y P K HRAL DIR+SI EL+YY+E +F
Sbjct: 123 YLHYRIVDVSSVKELARRWFPRAYFNSPDKNGNHRALADIRDSITELRYYREAVF 177
>gi|345482995|ref|XP_001603963.2| PREDICTED: oligoribonuclease, mitochondrial-like [Nasonia
vitripennis]
Length = 216
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 108/173 (62%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
++WIDLEMTGL + D+ILE+A IITD +L + +VIHQ+++ ++M WCQ H
Sbjct: 43 IIWIDLEMTGLNVMQDKILEVASIITDDQLNIVSDEFQMVIHQSEDVFETMIPWCQEQHN 102
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GL + +S E AE++++ F +K V T LAG+ +Y+D FL+++MP +
Sbjct: 103 KTGLIEASRNSIFNEEMAEEELIRFFRKYVPHNTCPLAGSCLYMDRAFLQQHMPRVFEYL 162
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
++DVSSI L RW + RK K HRAL DI++SI EL YY++NIF
Sbjct: 163 GDEVIDVSSINELAKRWNKKIERKKQRKTGDHRALGDIKDSIEELSYYRKNIF 215
>gi|146305663|ref|YP_001186128.1| oligoribonuclease [Pseudomonas mendocina ymp]
gi|166216580|sp|A4XPY0.1|ORN_PSEMY RecName: Full=Oligoribonuclease
gi|145573864|gb|ABP83396.1| Exonuclease, RNase T and DNA polymerase III [Pseudomonas mendocina
ymp]
Length = 180
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ E D I+E+A I+TD +L EGP + IHQ+ E L M EW H
Sbjct: 7 LIWIDLEMTGLEPERDVIIEMATIVTDSELNVLAEGPVIAIHQSDETLAGMDEWNTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + AE Q + F+++ V + GNS+ D FL KYMP L + F
Sbjct: 67 QSGLTQRVRESRIDTATAEAQTIAFLEQWVPKGKSPICGNSIGQDRRFLYKYMPALEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L W P+ + K H+ALDDIRESI ELK+Y+++ K
Sbjct: 127 HYRYLDVSTLKILAGMWAPQ-VKDSFQKTATHQALDDIRESIAELKHYRQHFLK 179
>gi|29831803|ref|NP_826437.1| oligoribonuclease [Streptomyces avermitilis MA-4680]
gi|37999370|sp|Q82CS8.1|ORN_STRAW RecName: Full=Oligoribonuclease
gi|29608920|dbj|BAC72972.1| putative 3'->5' exoribonuclease [Streptomyces avermitilis MA-4680]
Length = 200
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVRTMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L +G T +AE QV+ +V+++V PL GNSV D FL + M L +
Sbjct: 65 ASGLLDE-LAAGTTLADAEAQVLAYVREHVKEPGKAPL-CGNSVGTDRGFLARDMSALET 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E IF
Sbjct: 123 YLHYRIVDVSSVKELARRWYPRAYFNSPEKSGNHRALADIRESIAELRYYREAIF 177
>gi|82701847|ref|YP_411413.1| oligoribonuclease [Nitrosospira multiformis ATCC 25196]
gi|82409912|gb|ABB74021.1| Exonuclease [Nitrosospira multiformis ATCC 25196]
Length = 184
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WID+EM+GL + DRILEIA ++TD +L E P LV+ Q++ L+ M W ++ H
Sbjct: 8 LIWIDMEMSGLSPDRDRILEIALVVTDSQLEVLAEAPVLVLSQSESVLEGMDSWNKSTHA 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +KV SGLTE E E ++ F+++++ + GNS+ D FL ++MP L + F
Sbjct: 68 KSGLVEKVRASGLTEAEVEVHMIAFLQEHISAGVSPMCGNSICQDRRFLARWMPRLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 245
+ +DVS++K L RW P V +K+ KH AL DI +SI ELKYY+E+ +
Sbjct: 128 HYRNLDVSTLKELAKRWKPEILAGV-TKQCKHEALSDIYDSIAELKYYREHFMQA 181
>gi|403717943|ref|ZP_10942996.1| oligoribonuclease [Kineosphaera limosa NBRC 100340]
gi|403208809|dbj|GAB97679.1| oligoribonuclease [Kineosphaera limosa NBRC 100340]
Length = 201
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 109/175 (62%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL +E D ++E+A ++TD +L + +G D+VI L+ MG++ + H
Sbjct: 5 IVWIDCEMTGLSLEHDALIEVAALVTDFELNQLGDGVDVVIKPPAGALEQMGDFVRRMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL + L GL+ +A+ V+E+V++ V PL GN+V D MFL + MP+L
Sbjct: 65 TSGLLVE-LEQGLSMEQAQALVLEYVREWVPEAGKAPL-GGNTVGTDRMFLARDMPELEG 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ VDVSS+K L RWYPR Y P K HRAL DIR+SI EL+YY+E +F
Sbjct: 123 YLHYRNVDVSSVKELSRRWYPRVYFASPPKHGGHRALGDIRDSIAELRYYREAVF 177
>gi|289428666|ref|ZP_06430349.1| exonuclease [Propionibacterium acnes J165]
gi|335052163|ref|ZP_08545056.1| oligoribonuclease [Propionibacterium sp. 409-HC1]
gi|289158064|gb|EFD06284.1| exonuclease [Propionibacterium acnes J165]
gi|333764561|gb|EGL41953.1| oligoribonuclease [Propionibacterium sp. 409-HC1]
Length = 223
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++E+A ++TDG+L EG D++I + LD M ++ +N H
Sbjct: 23 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 82
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-----LAGNSVYVDFMFLKKYMPD 185
SGL + L GLT +A+ QV+++++ TY P LAGN++ D FL K MP
Sbjct: 83 TSGLLAE-LDKGLTMAQAQDQVLDYIR----TYVPQAGKAPLAGNTIGTDRSFLAKDMPK 137
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
L S + VDVSSIK L RWYPR + P K+ HRAL DI+ESI EL Y++E
Sbjct: 138 LESYVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWRE 192
>gi|302534542|ref|ZP_07286884.1| oligoribonuclease [Streptomyces sp. C]
gi|302443437|gb|EFL15253.1| oligoribonuclease [Streptomyces sp. C]
Length = 200
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M + + H
Sbjct: 5 MVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPDVVREMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNSVYVDFMFLKKYMPDLASL 189
ASGL + L +G T +AE QV+ +V+++V L GNSV D FL + MP L S
Sbjct: 65 ASGLLDE-LAAGTTLADAEAQVLAYVREHVKEPRKAPLCGNSVGTDRGFLSRDMPALESH 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DI+ESI EL+YY+E +F
Sbjct: 124 LHYRIVDVSSVKELARRWYPRAYFNSPPKNGNHRALADIKESIAELRYYREAVF 177
>gi|26991580|ref|NP_747005.1| oligoribonuclease [Pseudomonas putida KT2440]
gi|148549980|ref|YP_001270082.1| oligoribonuclease [Pseudomonas putida F1]
gi|386014175|ref|YP_005932452.1| Orn [Pseudomonas putida BIRD-1]
gi|395445745|ref|YP_006385998.1| oligoribonuclease [Pseudomonas putida ND6]
gi|397695342|ref|YP_006533224.1| Oligoribonuclease [Pseudomonas putida DOT-T1E]
gi|421523712|ref|ZP_15970341.1| oligoribonuclease [Pseudomonas putida LS46]
gi|37999402|sp|Q88DC5.1|ORN_PSEPK RecName: Full=Oligoribonuclease
gi|166216581|sp|A5W9T8.1|ORN_PSEP1 RecName: Full=Oligoribonuclease
gi|24986668|gb|AAN70469.1|AE016688_8 oligoribonuclease [Pseudomonas putida KT2440]
gi|148514038|gb|ABQ80898.1| Exonuclease, RNase T and DNA polymerase III [Pseudomonas putida F1]
gi|313500881|gb|ADR62247.1| Orn [Pseudomonas putida BIRD-1]
gi|388559742|gb|AFK68883.1| oligoribonuclease [Pseudomonas putida ND6]
gi|397332072|gb|AFO48431.1| Oligoribonuclease [Pseudomonas putida DOT-T1E]
gi|402752698|gb|EJX13203.1| oligoribonuclease [Pseudomonas putida LS46]
Length = 180
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD +L EGP + IH + E L M EW H
Sbjct: 7 LIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEWNTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M +L + F
Sbjct: 67 ASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMRNLENYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D R K H ALDDIRESI EL++Y+E+ K
Sbjct: 127 HYRNLDVSTLKELAARWAP-DVRDSFKKGNTHLALDDIRESIAELRHYREHFIK 179
>gi|398902514|ref|ZP_10651081.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM50]
gi|398178424|gb|EJM66074.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM50]
Length = 180
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 106/185 (57%), Gaps = 7/185 (3%)
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
Q PL L+WIDLEMTGL + D I+E+A IITD L EGP + IH + E L
Sbjct: 2 QNPLN------LIWIDLEMTGLNPDTDVIIEMATIITDSNLNTLAEGPVIAIHHSDEILA 55
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFL 179
M EW H SGLT++V S ++ EAE + + F++K V + GNS+ D FL
Sbjct: 56 GMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFL 115
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
+M L S F + +DVS++K L RW P D R K H ALDDIRESI EL++Y+
Sbjct: 116 YTHMKSLESYFHYRNLDVSTLKELAARWAP-DVRDSFKKGSTHLALDDIRESIAELQHYR 174
Query: 240 ENIFK 244
+N K
Sbjct: 175 KNFIK 179
>gi|381402968|ref|ZP_09927652.1| oligoribonuclease [Pantoea sp. Sc1]
gi|380736167|gb|EIB97230.1| oligoribonuclease [Pantoea sp. Sc1]
Length = 182
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL DRI+EIA ++TD L EGP + +HQ+ L M EW H
Sbjct: 9 LIWIDLEMTGLDPAHDRIIEIATLVTDANLNILAEGPVIAVHQSDAQLALMDEWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S + +R AE +EF+K+ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 NSGLVERVKASTIDDRAAELATLEFLKQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K H+ALDDIRES+ EL YY+E+ +
Sbjct: 129 HYRYLDVSTLKELARRWKP---SILPGFKKGGTHQALDDIRESVAELAYYREHFLQ 181
>gi|329914413|ref|ZP_08276114.1| Oligoribonuclease [Oxalobacteraceae bacterium IMCC9480]
gi|327545130|gb|EGF30416.1| Oligoribonuclease [Oxalobacteraceae bacterium IMCC9480]
Length = 201
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVW+D+EMTGL E DRI+E+A ++TD L +GP IHQ+ LD M W + H
Sbjct: 28 LVWLDMEMTGLDPETDRIIEVAVVVTDSNLNILGQGPVFAIHQSDAALDGMDNWNKGTHG 87
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +TE +AE ++ F+K V + GNS+ D F+ + MP L + F
Sbjct: 88 RSGLIERVKASTVTEADAEAALIAFLKDYVPAGKSPMCGNSICQDRRFMARGMPKLEAFF 147
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K LC RW P + K QKH AL DI ESI EL+YY+E+ +
Sbjct: 148 HYRNLDVSTLKELCKRWRP-ELASGFKKHQKHTALADIIESIEELRYYREHFIQ 200
>gi|383807590|ref|ZP_09963150.1| oligoribonuclease [Candidatus Aquiluna sp. IMCC13023]
gi|383298944|gb|EIC91559.1| oligoribonuclease [Candidatus Aquiluna sp. IMCC13023]
Length = 200
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VW+D EMTGL++ VD I EIA I+TD L EG +V+ +++ + +MG + N H
Sbjct: 5 IVWVDCEMTGLEVGVDEICEIAVIVTDEDLKPVHEGFQVVVKPSRKAMKNMGAFVTNMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASL 189
SGL ++ G++ ++AE+QV+ +VK+ V T LAGNS+ D MFL + P+ S
Sbjct: 65 VSGLITEI-PKGISIKKAEQQVLGYVKQWVTDKGTAPLAGNSIGTDRMFLNRQTPEFDSF 123
Query: 190 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKE 240
+ +DVSS K + RWYP+ Y ++P K+ HRAL DI+ESIMEL+YY++
Sbjct: 124 LHYRNIDVSSFKEMARRWYPKIYFQLPKKDVSHRALSDIQESIMELRYYRK 174
>gi|381395929|ref|ZP_09921623.1| oligoribonuclease [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379328494|dbj|GAB56756.1| oligoribonuclease [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 181
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL + +LEIA I+TD +L+ GP + IHQ+ + LD+M WC N H
Sbjct: 8 LVWIDMEMTGLNPDTCVVLEIATIVTDAQLSVIATGPVIAIHQSADVLDNMDPWCVNIHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
+GLT++ S + +A + ++F+K V L GN++ D FL KYMP L + F
Sbjct: 68 GTGLTQRCKESEVDVTQASQLTIDFLKNYVPAGKSPLCGNTIGQDRRFLVKYMPTLEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P + K+ H ALDDI ESI E+KYY+E +FK
Sbjct: 128 HYRNIDVSTVKELTARWQPEILKGF-KKKGVHLALDDIIESIEEMKYYRETVFK 180
>gi|311743097|ref|ZP_07716905.1| oligoribonuclease [Aeromicrobium marinum DSM 15272]
gi|311313777|gb|EFQ83686.1| oligoribonuclease [Aeromicrobium marinum DSM 15272]
Length = 203
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 4/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID EMTGL + D ++EIA ++TD +L G DLV+ +E LD M E H
Sbjct: 5 LVWIDCEMTGLSLTHDALIEIAVLVTDFELEVLGPGIDLVVKPPQEALDQMNEVVTRMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L +GLT ++A+ QV++ V++ V PL AGNSV D FL + MP+L +
Sbjct: 65 ASGLITE-LDAGLTLQDAQAQVLDHVREYVKEPGKAPL-AGNSVGTDRAFLARDMPELEN 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ ++DVSSIK L W+PR Y PSK HRAL DI ESI EL+YY+ +F+
Sbjct: 123 WLHYRVIDVSSIKELSRHWFPRAYFAAPSKAGHHRALTDIAESIEELRYYRGTVFR 178
>gi|333925249|ref|YP_004498828.1| oligoribonuclease [Serratia sp. AS12]
gi|333930202|ref|YP_004503780.1| oligoribonuclease [Serratia plymuthica AS9]
gi|386327073|ref|YP_006023243.1| oligoribonuclease [Serratia sp. AS13]
gi|333471809|gb|AEF43519.1| Oligoribonuclease [Serratia plymuthica AS9]
gi|333489309|gb|AEF48471.1| Oligoribonuclease [Serratia sp. AS12]
gi|333959406|gb|AEG26179.1| Oligoribonuclease [Serratia sp. AS13]
Length = 181
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLGLMDDWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R AE + F+++ V + GNS+ D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASRFDDRAAELDTIAFLQQWVPAGKSPICGNSIGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ K+ H+A+DDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPQILSGF-KKQGTHQAMDDIRESVAELAYYREHFIQ 180
>gi|294790670|ref|ZP_06755828.1| oligoribonuclease [Scardovia inopinata F0304]
gi|294458567|gb|EFG26920.1| oligoribonuclease [Scardovia inopinata F0304]
Length = 242
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WID EMTGL I+ D + E++ + TD LT G DLVI ++ LD MG++ ++ H
Sbjct: 23 LIWIDCEMTGLDIDHDELCEVSVVPTDFNLTVLDRGIDLVIKPSQGALDHMGDFVRHMHT 82
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV---GTYTPLLAGNSVYVDFMFLKKYMPDLA 187
SGL ++ + GL +AEKQV+E+V+ + G LAGN++ D FL K+MP L
Sbjct: 83 VSGLLEQ-MKEGLVLGQAEKQVIEYVRPFLPEEGQGKAHLAGNTIGSDKKFLDKFMPGLM 141
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
L + +DVS++K L RWYP+ Y P K HRAL DI ESI EL+YY++++F
Sbjct: 142 GLLHYRTIDVSTLKELSRRWYPQVYSNRPVKHGGHRALADIIESIDELRYYRQSMF 197
>gi|222111865|ref|YP_002554129.1| oligoribonuclease [Acidovorax ebreus TPSY]
gi|221731309|gb|ACM34129.1| Exonuclease RNase T and DNA polymerase III [Acidovorax ebreus TPSY]
Length = 192
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 107/191 (56%), Gaps = 1/191 (0%)
Query: 53 LENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIH 112
+ + N P + LVW+D EM+GL E +R+LEIA ++T LT VEGP IH
Sbjct: 1 MSDTANPTVPALAKSDQNLVWLDCEMSGLNPETERLLEIAVVVTSADLTLRVEGPVFAIH 60
Query: 113 QTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSV 172
Q LD M W + H SGL KV S +TE +AE++++ F+ + V + GNS+
Sbjct: 61 QADAVLDGMDAWNKGTHGRSGLIDKVRASTITEADAERELLAFLSRYVPKGVVPMCGNSI 120
Query: 173 YVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESI 232
D FL KYMP L + F + VDVS++K L RW P Y K Q+H AL D+ ESI
Sbjct: 121 GQDRRFLVKYMPKLEAFFHYRNVDVSTLKELAKRWKPEAYSSF-KKAQRHTALADVHESI 179
Query: 233 MELKYYKENIF 243
EL +Y+ ++
Sbjct: 180 DELLHYRTHLL 190
>gi|421505267|ref|ZP_15952205.1| oligoribonuclease [Pseudomonas mendocina DLHK]
gi|400343676|gb|EJO92048.1| oligoribonuclease [Pseudomonas mendocina DLHK]
Length = 180
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL+ E D I+E+A I+TD +L EGP + IHQ+ E L M EW H
Sbjct: 7 LIWIDLEMTGLEPERDVIIEMATIVTDSELNVLAEGPVIAIHQSDETLAGMDEWNTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S + AE Q + F+++ V + GNS+ D FL KYMP L + F
Sbjct: 67 QSGLTQRVRESRIDTATAEAQTIAFLEQWVPKGKSPICGNSIGQDRRFLYKYMPALEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L W P+ + K H+ALDDIRESI ELK+Y+++ K
Sbjct: 127 HYRYLDVSTLKILAGMWAPQ-VKDSFQKTATHQALDDIRESIAELKHYRQHFLK 179
>gi|410612135|ref|ZP_11323218.1| oligoribonuclease [Glaciecola psychrophila 170]
gi|410168326|dbj|GAC37107.1| oligoribonuclease [Glaciecola psychrophila 170]
Length = 181
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
LVWID+EMTGL+ E D +LEIA I+TD L EGP L I+Q E L+ M +WC + H
Sbjct: 8 LVWIDMEMTGLEPETDVVLEIATIVTDKNLNILAEGPVLAIYQPDEVLNGMDQWCTDTHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLTK+ S + E++A +Q + F++ V L GN++ D FL KYM +L F
Sbjct: 68 KSGLTKRCRDSDVNEQQAVEQTILFLEDFVPKGISPLCGNTIGQDRRFLVKYMSELEQYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS+IK L RW P K+ H ALDDIRESI E+ YY++++F
Sbjct: 128 HYRNIDVSTIKELVRRWKPELLDGF-HKKGVHLALDDIRESIAEMVYYRQHVF 179
>gi|297538700|ref|YP_003674469.1| Exonuclease RNase T and DNA polymerase III [Methylotenera
versatilis 301]
gi|297258047|gb|ADI29892.1| Exonuclease RNase T and DNA polymerase III [Methylotenera
versatilis 301]
Length = 186
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+D+EM+GL + DRILE+A ++TD L E P VIHQ+ LD M W + H
Sbjct: 13 LIWLDMEMSGLLPDSDRILELAAVVTDADLNVLGESPVFVIHQSDAVLDGMDAWNKGAHG 72
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +KV S L E EA Q++ F+K+ V + GNS+ D F+ +YMPDL S F
Sbjct: 73 RSGLIEKVKASTLDESEATLQMIAFLKQFVPANKSPMCGNSICQDRRFMARYMPDLESYF 132
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENI 242
+ +DVS K L RW P Y K KH AL DI ESI ELKYY+E+
Sbjct: 133 HYRNLDVSVFKELARRWKPEIYSGF-KKASKHEALADIYESIDELKYYREHF 183
>gi|452911484|ref|ZP_21960152.1| 3'-to-5' oligoribonuclease (orn) [Kocuria palustris PEL]
gi|452833412|gb|EME36225.1| 3'-to-5' oligoribonuclease (orn) [Kocuria palustris PEL]
Length = 209
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 114/178 (64%), Gaps = 10/178 (5%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI + L+ MG++ +N H
Sbjct: 1 MVWIDCEMTGLSLTDDALIEVAVLVTDDQLNVLGDGVDVVIRPPEGALEQMGDFVRNMHV 60
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP-----LLAGNSVYVDFMFLKKYMPD 185
SGL ++ L SG + EA++QV+++++ T+ P LAGNSV D FL + MP+
Sbjct: 61 ESGLLEE-LPSGTSMEEAQQQVLDYIR----TWVPEPGKAPLAGNSVGTDRTFLVRDMPE 115
Query: 186 LASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ + ++DVS+IK L RW+PR Y + P K HRAL DI++SI EL+YY+E +F
Sbjct: 116 VVEHLHYRIIDVSTIKELSRRWFPRAYFQSPDKTGNHRALGDIKDSIDELRYYREAVF 173
>gi|294634445|ref|ZP_06712981.1| oligoribonuclease [Edwardsiella tarda ATCC 23685]
gi|451966512|ref|ZP_21919765.1| oligoribonuclease [Edwardsiella tarda NBRC 105688]
gi|291092155|gb|EFE24716.1| oligoribonuclease [Edwardsiella tarda ATCC 23685]
gi|451314813|dbj|GAC65127.1| oligoribonuclease [Edwardsiella tarda NBRC 105688]
Length = 181
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 102/174 (58%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD +L EGP + +HQ L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDAELNVLAEGPVIAVHQDDAQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
ASGL ++V S AE+ +EF+++ V + GNSV D FL +YMP+L F
Sbjct: 68 ASGLVQRVKESRYDTAAAEQATLEFLRQWVPAGVSPICGNSVGQDRRFLFRYMPELERYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+ N +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-HKQNTHQALDDIRESVAELAYYRSNFIR 180
>gi|448240139|ref|YP_007404192.1| oligoribonuclease [Serratia marcescens WW4]
gi|445210503|gb|AGE16173.1| oligoribonuclease [Serratia marcescens WW4]
gi|453066181|gb|EMF07133.1| oligoribonuclease [Serratia marcescens VGH107]
gi|453066324|gb|EMF07272.1| oligoribonuclease [Serratia marcescens VGH107]
Length = 181
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDEWNVRTHT 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R AE + + F+++ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASRQDDRAAELETIAFLQQWVPAGKSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILGGF-KKQGTHQALDDIRESVAELAYYREHFIQ 180
>gi|398942038|ref|ZP_10670101.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp.
GM41(2012)]
gi|398161140|gb|EJM49382.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp.
GM41(2012)]
Length = 180
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 103/174 (59%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD L EGP + IH + E L M EW H
Sbjct: 7 LIWIDLEMTGLNPDTDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEILAGMDEWNTRQHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++ EAE + + F++K V + GNS+ D FL +M L S F
Sbjct: 67 GSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMKSLESFF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D R K H ALDDIRESI EL++Y++N K
Sbjct: 127 HYRNLDVSTLKELAARWAP-DVRDSFKKGSTHLALDDIRESIAELQHYRKNFIK 179
>gi|394987815|ref|ZP_10380654.1| exonuclease RNase T and DNA polymerase III [Sulfuricella
denitrificans skB26]
gi|393793034|dbj|GAB70293.1| exonuclease RNase T and DNA polymerase III [Sulfuricella
denitrificans skB26]
Length = 182
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 102/174 (58%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WID+EM+GL E DRI+EIA +ITD L E P LV+HQ+ E L+ M W H
Sbjct: 8 LIWIDMEMSGLVPERDRIIEIALVITDSNLETIAEAPVLVVHQSDEVLNGMDAWNTATHG 67
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL KV S L + E Q++EF+K+ V + GNS+ D F+ YMP L F
Sbjct: 68 KSGLIDKVKASKLDDAAVEAQLIEFLKEYVPGKKSPMCGNSICQDRRFMANYMPKLEDYF 127
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P+ Y KE H AL D+ ESI E++YY+EN +
Sbjct: 128 HYRNLDVSTLKELAKRWRPQVYGGF-KKENNHTALADVYESIGEMRYYRENFLR 180
>gi|297199883|ref|ZP_06917280.1| oligoribonuclease [Streptomyces sviceus ATCC 29083]
gi|197710348|gb|EDY54382.1| oligoribonuclease [Streptomyces sviceus ATCC 29083]
Length = 200
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI + L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGDGVDIVIRPPDQALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
SGL + L G T +AE+QV+ +V+++V PL GNSV D FL + MP L
Sbjct: 65 VSGLLDE-LAGGTTLADAEEQVLAYVREHVKEPGKAPL-CGNSVGTDRGFLLRDMPTLED 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E IF
Sbjct: 123 YLHYRIVDVSSVKELARRWYPRAYFNSPDKNGNHRALADIRESIAELRYYREAIF 177
>gi|254393010|ref|ZP_05008173.1| oligoribonuclease [Streptomyces clavuligerus ATCC 27064]
gi|294812789|ref|ZP_06771432.1| Oligoribonuclease [Streptomyces clavuligerus ATCC 27064]
gi|326441260|ref|ZP_08215994.1| oligoribonuclease [Streptomyces clavuligerus ATCC 27064]
gi|197706660|gb|EDY52472.1| oligoribonuclease [Streptomyces clavuligerus ATCC 27064]
gi|294325388|gb|EFG07031.1| Oligoribonuclease [Streptomyces clavuligerus ATCC 27064]
Length = 200
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+VI L +M E + H
Sbjct: 5 MVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALATMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T +AE++V+ +++++V PL GNSV D FL + MP L S
Sbjct: 65 ASGLLDE-LAGGTTLADAEERVLAYIREHVREPGKAPL-CGNSVGTDRGFLSRDMPALES 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 WLHYRIVDVSSVKELARRWYPRAYFNSPEKSGNHRALADIRESIAELRYYREAVF 177
>gi|56461400|ref|YP_156681.1| oligoribonuclease [Idiomarina loihiensis L2TR]
gi|81821669|sp|Q5QVW2.1|ORN_IDILO RecName: Full=Oligoribonuclease
gi|56180410|gb|AAV83132.1| Oligoribonuclease (3'->5' exoribonuclease) [Idiomarina loihiensis
L2TR]
Length = 183
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 68 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 127
K L+WIDLEMTGL+ + + I+E+A I+TD +L EGP + +HQ ++ LD M +W
Sbjct: 7 KQRLIWIDLEMTGLEPDENHIIEVATIVTDAQLNTLAEGPVIAVHQPQKHLDRMDDWNVK 66
Query: 128 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 187
H SGL ++V S ER+A + +EF+++ + + GNS+ D FL K+MP+L
Sbjct: 67 THTGSGLVERVKESQHDERKAAAETIEFLRQYIDAGVSPMCGNSICQDRRFLAKHMPELE 126
Query: 188 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ F + +DVS++K L RW P + K H AL DIRESI EL++Y+E+ F
Sbjct: 127 AFFHYRNLDVSTLKELAKRWNP-EVANSFKKSGAHEALADIRESIAELQHYREHFF 181
>gi|408531681|emb|CCK29855.1| Oligoribonuclease [Streptomyces davawensis JCM 4913]
Length = 200
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L +G D+VI L++M E + H
Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNILGDGVDIVIRPPDSALETMPEVVRQMHT 64
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L G T +AE QV+ +V+++V PL GNSV D FL + MP L +
Sbjct: 65 ASGLLDE-LAGGTTLADAEAQVLAYVREHVKEPGKAPL-CGNSVGTDRGFLLRDMPALEN 122
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSSIK L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 123 HLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVF 177
>gi|254281582|ref|ZP_04956550.1| oligoribonuclease [gamma proteobacterium NOR51-B]
gi|219677785|gb|EED34134.1| oligoribonuclease [gamma proteobacterium NOR51-B]
Length = 180
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 108/176 (61%), Gaps = 2/176 (1%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+W+DLEMTGL E R++EIA I+TD L + +GP L IHQ+ L M EW N H
Sbjct: 7 LIWVDLEMTGLVPEEHRVIEIATIVTDSALNELAQGPVLAIHQSDAELSKMDEWNVNTHT 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL +V SGL E A + + F+K+ V + GNS+ D F+ ++MP+L + F
Sbjct: 67 GSGLVDRVKSSGLDEGAAVSETLAFLKEWVSAGASPMCGNSICQDRRFMARHMPELEAYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
+ +DVS++K L W P D + P K H+AL+DIRESI+EL++Y+E+ + N
Sbjct: 127 HYRNLDVSTLKILANLWRP-DLPRAP-KTGTHQALEDIRESIVELRHYREHFIRVN 180
>gi|410076152|ref|XP_003955658.1| hypothetical protein KAFR_0B02250 [Kazachstania africana CBS 2517]
gi|372462241|emb|CCF56523.1| hypothetical protein KAFR_0B02250 [Kazachstania africana CBS 2517]
Length = 337
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 56 QQNSQTPLEFEYKM--PLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVE-GPDLVIH 112
QQNS +P E K+ P+VW+D EMTGL DRI+EI CIITDG L E G + V+H
Sbjct: 40 QQNSLSPFEERNKIFKPIVWVDCEMTGLDHVNDRIIEICCIITDGNLNIIDETGYESVVH 99
Query: 113 QTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVG-TYTPLLAGNS 171
K LD+M EWC HH SGLT KVL S T+ + E +++++VKK + T +LAGNS
Sbjct: 100 CDKSVLDNMNEWCIEHHGNSGLTAKVLASDKTKEQVETELLDYVKKYIPEKNTGILAGNS 159
Query: 172 VYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRES 231
+++D +F+ K P + + L+DVS+I + R P P KE H A DI ES
Sbjct: 160 IHMDRLFMLKEFPTVIDHLFYRLIDVSTIMEVSRRHNPDLASVFPKKETAHTAKKDILES 219
Query: 232 IMELKYYKENIFK 244
I +L++Y ++ K
Sbjct: 220 IEQLRWYMKHYLK 232
>gi|345849961|ref|ZP_08802966.1| oligoribonuclease [Streptomyces zinciresistens K42]
gi|345638653|gb|EGX60155.1| oligoribonuclease [Streptomyces zinciresistens K42]
Length = 196
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
+VWID EMTGL + D ++E+A ++TD +L EG D+V+ L +M + + H
Sbjct: 1 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVVRPPDAALTTMPDVVRQMHT 60
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNV--GTYTPLLAGNSVYVDFMFLKKYMPDLAS 188
ASGL + L +G T +AE+QV+ +V+++V PL GNSV D FL + MP L
Sbjct: 61 ASGLLDE-LAAGTTLADAEEQVLAYVREHVKEPGRAPL-CGNSVGTDRGFLLRDMPTLEG 118
Query: 189 LFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +VDVSS+K L RWYPR Y P K HRAL DIRESI EL+YY+E +F
Sbjct: 119 YLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVF 173
>gi|329295775|ref|ZP_08253111.1| Orn [Plautia stali symbiont]
Length = 182
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL E DRI+EIA I+TD L EGP L +HQ+ L M +W H
Sbjct: 9 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILAEGPVLAVHQSDAQLALMDDWNVRTHT 68
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGL ++V S +R AE+ + F+++ V T + GNS+ D FL KYMP+L + F
Sbjct: 69 HSGLVERVKASQHDDRAAEQATIAFLQQWVPANTSPICGNSIGQDRRFLFKYMPELEAYF 128
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPS--KEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P +P K H+ALDDIRESI EL YY+++ +
Sbjct: 129 HYRYLDVSTLKELARRWKP---EILPGFKKAGTHQALDDIRESIAELAYYRKHFLQ 181
>gi|149927960|ref|ZP_01916210.1| oligoribonuclease [Limnobacter sp. MED105]
gi|149823399|gb|EDM82632.1| oligoribonuclease [Limnobacter sp. MED105]
Length = 191
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Query: 72 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEA 131
+W+D+EMTGL D+++E+A ++TD +L EGP L IHQ+ + L M W + H
Sbjct: 1 MWVDMEMTGLDPFNDKVIEVAVVVTDSELNVLEEGPVLAIHQSDDILAGMDAWNTSTHGK 60
Query: 132 SGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFS 191
SGLT +V S + E +AE+ ++EF+ K +G + GNS+ D F+ KYMP L + F
Sbjct: 61 SGLTARVKESVIDEAQAEELLIEFLTKYIGPGKSPMCGNSICQDRRFMAKYMPKLEAYFH 120
Query: 192 HVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 243
+ +DVS++K LC RW P RK K+ KH AL DI ESI EL++Y+E+
Sbjct: 121 YRNLDVSTLKELCKRWNPTTARKF-VKKTKHTALADIHESIDELRFYREHFI 171
>gi|398846720|ref|ZP_10603679.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM84]
gi|398252283|gb|EJN37481.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM84]
Length = 180
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 71 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 130
L+WIDLEMTGL + D I+E+A I+TD +L EGP + IH + E L M EW H
Sbjct: 7 LIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEWNTRTHG 66
Query: 131 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 190
SGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M DL + F
Sbjct: 67 GSGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMRDLENYF 126
Query: 191 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 244
+ +DVS++K L RW P D R K H ALDDIRESI EL++Y+E+ K
Sbjct: 127 HYRNLDVSTLKELAARWAP-DVRDSFKKGGTHLALDDIRESIAELRHYREHFIK 179
>gi|121595648|ref|YP_987544.1| oligoribonuclease [Acidovorax sp. JS42]
gi|166215746|sp|A1WB43.1|ORN_ACISJ RecName: Full=Oligoribonuclease
gi|120607728|gb|ABM43468.1| Exonuclease, RNase T and DNA polymerase III [Acidovorax sp. JS42]
Length = 192
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 107/191 (56%), Gaps = 1/191 (0%)
Query: 53 LENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIH 112
+ + N P + LVW+D EM+GL E +R+LEIA ++T LT VEGP IH
Sbjct: 1 MSDTANPTVPALAKSDQNLVWLDCEMSGLNPETERLLEIAVVVTSADLTLRVEGPVFAIH 60
Query: 113 QTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSV 172
Q LD M W + H SGL KV S +TE +AE++++ F+ + V + GNS+
Sbjct: 61 QADAVLDGMDAWNKGTHGRSGLIDKVRASTVTEADAERELLAFLSRYVPKGVVPMCGNSI 120
Query: 173 YVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESI 232
D FL KYMP L + F + VDVS++K L RW P Y K Q+H AL D+ ESI
Sbjct: 121 GQDRRFLVKYMPKLEAFFHYRNVDVSTLKELAKRWKPEAYSSF-KKAQRHTALADVHESI 179
Query: 233 MELKYYKENIF 243
EL +Y+ ++
Sbjct: 180 DELLHYRTHLL 190
>gi|398857628|ref|ZP_10613326.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM79]
gi|398240455|gb|EJN26132.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM79]
Length = 180
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 106/185 (57%), Gaps = 7/185 (3%)
Query: 60 QTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLD 119
Q PL L+WIDLEMTGL + D I+E+A I+TD L EGP + IH + E L
Sbjct: 2 QNPLN------LIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDEILA 55
Query: 120 SMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFL 179
M EW H SGLT++V S ++ EAE + + F++K V + GNS+ D FL
Sbjct: 56 GMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFL 115
Query: 180 KKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYK 239
+M L S F + +DVS++K L RW P D R K H ALDDIRESI EL++Y+
Sbjct: 116 YTHMKSLESYFHYRNLDVSTLKELAARWAP-DVRDSFKKGSTHLALDDIRESIAELQHYR 174
Query: 240 ENIFK 244
+N K
Sbjct: 175 KNFIK 179
>gi|430809228|ref|ZP_19436343.1| oligoribonuclease [Cupriavidus sp. HMR-1]
gi|429498372|gb|EKZ96882.1| oligoribonuclease [Cupriavidus sp. HMR-1]
Length = 184
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 106/169 (62%), Gaps = 1/169 (0%)
Query: 78 MTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKK 137
MTGL+ + DRI+E+A ++TD +L EGP LVIHQ LD+M W + H SGL K
Sbjct: 1 MTGLQPDTDRIIEVAVVVTDSELNILAEGPVLVIHQPDAVLDAMDNWNKGTHGRSGLIDK 60
Query: 138 VLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDV 197
V S LTE +AE +++ F+K+ V + GNS+ D F+ +YMP L S F + +DV
Sbjct: 61 VKASTLTEAQAEAELLAFLKRWVPANKSPMCGNSICQDRRFMARYMPKLESFFHYRNLDV 120
Query: 198 SSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 246
S++K LC RW P ++ +K Q H AL DI ES+ EL+YY+++ KT+
Sbjct: 121 STLKELCKRWEPAIHKGF-TKRQLHTALADILESVEELRYYRQHFIKTS 168
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,595,937,581
Number of Sequences: 23463169
Number of extensions: 137356678
Number of successful extensions: 907740
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 187
Number of HSP's that attempted gapping in prelim test: 885862
Number of HSP's gapped (non-prelim): 17571
length of query: 249
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 110
effective length of database: 9,097,814,876
effective search space: 1000759636360
effective search space used: 1000759636360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)