BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025710
(249 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54IK2|TM120_DICDI Transmembrane protein 120 homolog OS=Dictyostelium discoideum
GN=tmem120 PE=3 SV=1
Length = 368
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 35/179 (19%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRT-------ALLFLLFPSTLLILRSWIWDGCL 53
+F+G +NV+ R++ + ++K+EY ++ +T +L LL+P + + SW
Sbjct: 131 LFLGQVNVKHMRENEKFRLKQEYEKFKKKTNPQFILFVVLLLLYPQSSFVTTSW------ 184
Query: 54 PAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQP 113
Q WLL+ Y LALRENIL +NGS I+PWWI HHY ++ +L +L + +
Sbjct: 185 --------QIWLLYYYITLALRENILLVNGSSIKPWWIMHHYLSIAGSLTNLLFPL---- 232
Query: 114 NCAQKQRGVQLFLQ----WAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAG 168
FL ++ QG+ +L NRYQ+ RLY +A+GKA +DV GE+ G
Sbjct: 233 -----SESFSYFLPQVTYFSGCQGLVQILTNRYQQGRLYKLVAMGKANIIDVT-GESEG 285
>sp|A6QPF8|T120B_BOVIN Transmembrane protein 120B OS=Bos taurus GN=TMEM120B PE=2 SV=1
Length = 339
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 24/247 (9%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQ 59
+ +G +NV + K+EY ++ ++ LL + L + D +
Sbjct: 107 LVLGNVNVTLLSNQAKFAYKDEYEKFKLYLTIILLLGAVACRFFLHYRVTD--------E 158
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
++ L++ Y L +RE+IL NGS I+ WW+ HHY + ++ V LTW PN Q
Sbjct: 159 VFNFLLVWYYCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGLIYQ 213
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----L 175
+ FL +++ Q LQ YQR LY ALG+ +D+ G +W
Sbjct: 214 KFRNQFLAFSIFQSCVQFLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTF 270
Query: 176 LCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK-- 233
L P LF ++ Y + L + + EWQV +++ +GNF+ T++ + TK
Sbjct: 271 LLPFLFCGHFWQLYNAVTLFELSSHEECREWQVFVLALTFLVLFLGNFLTTLKVVHTKLQ 330
Query: 234 -SRFKAK 239
+R KAK
Sbjct: 331 QNRSKAK 337
>sp|A0PK00|T120B_HUMAN Transmembrane protein 120B OS=Homo sapiens GN=TMEM120B PE=2 SV=1
Length = 339
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 27/253 (10%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQ 59
+ +G +NV + K+EY ++ ++ LL + +L + D +
Sbjct: 107 LVLGNVNVTLLSNQAKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTD--------E 158
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
++ L++ Y L +RE+IL NGS I+ WW+ HHY + ++ V LTW PN Q
Sbjct: 159 VFNFLLVWYYCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGPIYQ 213
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----L 175
+ FL +++ Q LQ YQR LY ALG+ +D+ G +W
Sbjct: 214 KFRNQFLAFSIFQSCVQFLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTF 270
Query: 176 LCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSR 235
L P LF ++ Y + L + + EWQV +++ +GNF+ T++ +
Sbjct: 271 LLPFLFCGHFWQLYNAVTLFELSSHEECREWQVFVLAFTFLILFLGNFLTTLKVV----- 325
Query: 236 FKAKMKKSKSKPE 248
AK++K++ K +
Sbjct: 326 -HAKLQKNRGKTK 337
>sp|Q3TA38|T120B_MOUSE Transmembrane protein 120B OS=Mus musculus GN=Tmem120b PE=2 SV=1
Length = 339
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 27/253 (10%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQ 59
+ +G ++V + K+EY ++ ++ LL + +L + D +
Sbjct: 107 LVLGNVSVTLLSNQAKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTD--------E 158
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
++ L++ Y L +RE+IL NGS I+ WW+ HHY + ++ V LTW PN Q
Sbjct: 159 VFNFLLVWYYCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGLIYQ 213
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----L 175
+ FL +++ Q LQ YQR LY ALG+ +D+ G +W
Sbjct: 214 KFRNQFLAFSIFQSCVQFLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTF 270
Query: 176 LCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSR 235
L P LF ++ Y + L + + EWQV +++ +GNF+ T++ +
Sbjct: 271 LLPFLFCGHFWQLYNAVTLFELSTHEECKEWQVFVLALTFLILFLGNFLTTLKVV----- 325
Query: 236 FKAKMKKSKSKPE 248
AK+ K+++K +
Sbjct: 326 -HAKLHKNRNKTK 337
>sp|A3KNK1|T120A_DANRE Transmembrane protein 120A OS=Danio rerio GN=tmem120a PE=2 SV=1
Length = 341
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 21/244 (8%)
Query: 3 IGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLILRSW-IWDGCLPAFPVQLY 61
+G +NV K + K+EY ++ +L L F T L S+ + D L+
Sbjct: 112 LGNVNVTLLNKQSKFAYKDEYEKFKLYLTVLLLFFSFTCRFLVSYRVVDA--------LF 163
Query: 62 QAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRG 121
L++ Y L +RE+IL NGS I+ WW++ HY + ++ V LTW P+ Q
Sbjct: 164 NFLLVWYYCTLTIRESILINNGSKIKGWWVFQHYVSTFLSGVMLTW-----PDGELYQMF 218
Query: 122 VQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLC 177
FL ++M Q YQ LY ALG+ MD+ G +W L
Sbjct: 219 RNQFLSYSMYINFVQFFQYYYQSGCLYRLRALGERHNMDLT---VEGFQSWMWRGLTFLL 275
Query: 178 PILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFK 237
P LF+ F+ Y G+ L + + EWQV CG+ +++ +GNF T+ + K +
Sbjct: 276 PFLFLGHFFQLYNGITLFQMTQLPEWKEWQVLMCGSTFLVLFMGNFFTTLGVVYHKYMDQ 335
Query: 238 AKMK 241
K K
Sbjct: 336 DKAK 339
>sp|Q9U1M2|TM120_DROME Transmembrane protein 120 homolog OS=Drosophila melanogaster
GN=CG32795 PE=1 SV=1
Length = 387
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 28/249 (11%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLILRSWIWDGCLPAFPVQL 60
+ +G +NV ++ +++ K++Y ++ ++ L+ LI F +
Sbjct: 105 IILGDVNVSILNRNDKVRYKDDYEKFKLILNVIGLIMAFFNLI------------FNYRA 152
Query: 61 YQAWLLFL----YTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCA 116
+ +FL Y L +RE+IL++NGS I+ WW HH+ + + A V L W P
Sbjct: 153 LELAFIFLLVWYYCTLTIRESILKVNGSRIKGWWRAHHFISTVAAGVLLVW-----PQGE 207
Query: 117 QKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW-- 174
Q F+ + + + LQ YQ+ LY ALG+ MD+ G +W
Sbjct: 208 HWQIFRMQFMYFNVYISIVQYLQFGYQKGLLYRLKALGERHNMDIT---IEGFHSWMWRG 264
Query: 175 --LLCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMT 232
L P LFI G++AY L K A W VS L +L+ VGN T+ +
Sbjct: 265 LSFLLPFLFIGYGYQAYNAWTLYKLAYSPPDAPWHVSVMSGLFLLLFVGNMATTLWVVPE 324
Query: 233 KSRFKAKMK 241
K R +AK +
Sbjct: 325 KIRERAKER 333
>sp|Q5FWV6|T120A_XENTR Transmembrane protein 120A OS=Xenopus tropicalis GN=tmem120a PE=2
SV=2
Length = 336
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 21/236 (8%)
Query: 3 IGPINVRASRKDVQLKVKEEYNSYR-DRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLY 61
+G +NV K + K+EY ++ T +L +L +L S + D ++
Sbjct: 112 LGNVNVTLLSKQSKFAYKDEYEKFKLYLTMILMVLSFICRFVLNSRVTDA--------VF 163
Query: 62 QAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRG 121
L++ Y L +RE+IL NGS I+ WW+ +HY + ++ V LTW P+ Q
Sbjct: 164 NFLLVWYYCTLTIRESILINNGSRIKGWWVLNHYISTFLSGVMLTW-----PDGLMYQMF 218
Query: 122 VQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLC 177
FL ++M Q LQ YQ LY ALG+ MD+ G +W L
Sbjct: 219 RNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHNMDLT---VEGFQSWMWRGLTFLL 275
Query: 178 PILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK 233
P LF Q ++ Y + L K A EWQV CG ++ +GNF T++ + K
Sbjct: 276 PFLFFGQFWQLYNAITLFKLARHPECKEWQVIMCGLPFLVHFLGNFFTTLRVVHQK 331
>sp|A1L2R7|T120A_XENLA Transmembrane protein 120A OS=Xenopus laevis GN=tmem120a PE=2 SV=1
Length = 336
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 21/236 (8%)
Query: 3 IGPINVRASRKDVQLKVKEEYNSYR-DRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLY 61
+G +NV K + K+EY ++ T +L +L +L S + D ++
Sbjct: 112 LGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILMVLSFICRFLLNSRVTDA--------VF 163
Query: 62 QAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRG 121
L++ Y L +RE+IL NGS I+ WW+ +HY + ++ V LTW P+ Q
Sbjct: 164 NFLLVWYYCTLTIRESILINNGSRIKGWWVLNHYISTFLSGVMLTW-----PDGLMYQMF 218
Query: 122 VQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLC 177
FL ++M Q LQ YQ LY ALG+ MD+ G +W L
Sbjct: 219 RNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHNMDLT---VEGFQSWMWRGLTFLL 275
Query: 178 PILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK 233
P LF Q ++ Y + L K A EWQV CG ++ +GNF T++ + K
Sbjct: 276 PFLFFGQFWQLYNAITLFKLARHPECKEWQVIMCGLPFLVHFLGNFFTTLRVVHQK 331
>sp|Q1LY80|T120B_DANRE Transmembrane protein 120B OS=Danio rerio GN=tmem120b PE=2 SV=1
Length = 337
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 19/237 (8%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLILRSWIWDGCLPAFPVQL 60
+ +G +NV + K+EY ++ ++ + T L L ++ ++
Sbjct: 105 LVLGNVNVTLLSNQAKFAYKDEYEKFKLYMTIILMFGAVTCLFLLNY-------RVTDEI 157
Query: 61 YQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQR 120
+ L++ Y L +RE+ILR NGS I+ WW+ HHY + ++ V LTW P Q
Sbjct: 158 FNFLLVWYYCTLTIRESILRSNGSRIKGWWVSHHYVSTFLSGVMLTW-----PEGPMYQM 212
Query: 121 GVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LL 176
FL +++ Q LQ YQ LY ALG+ ++D+ G +W L
Sbjct: 213 FRSQFLAFSIYQSCVQFLQYYYQSGCLYRLRALGERNQLDLT---VEGFQSWMWRGLTFL 269
Query: 177 CPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK 233
P LF ++ Y + L + + + EWQV +++ +GNF+ T++ + K
Sbjct: 270 LPFLFFGHFWQLYNAVTLFRLSALDDCKEWQVFMLALTFLVLFLGNFLTTLKVVHQK 326
>sp|Q6DE21|T12BB_XENLA Transmembrane protein 120B-B OS=Xenopus laevis GN=tmem120b-b PE=2
SV=1
Length = 335
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 22/245 (8%)
Query: 3 IGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLY 61
+G +NV K + K+EY ++ ++ LL T +L + D +++
Sbjct: 107 LGNVNVTLLSKQTKFAYKDEYEKFKLYLTIILLLGAITCRFVLHYRVTD--------EVF 158
Query: 62 QAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRG 121
L++ + L +RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q
Sbjct: 159 NFLLVWYFCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQMF 213
Query: 122 VQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLC 177
FL +++ Q LQ YQ LY ALG+ + + G +W L
Sbjct: 214 RNQFLAFSIFQSCVQFLQYYYQSGCLYRLRALGERNHLHLT---VEGFQSWMWRGLTFLL 270
Query: 178 PILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFK 237
P+LF ++ Y + L + EWQV +L+ +GNF+ T++ + TK + K
Sbjct: 271 PVLFFGHFWQLYNAMTLFGLSRHEECKEWQVFVLALTFLLLFLGNFLTTLKVVHTKFQ-K 329
Query: 238 AKMKK 242
K+KK
Sbjct: 330 NKLKK 334
>sp|Q5HZE2|T120A_RAT Transmembrane protein 120A OS=Rattus norvegicus GN=Tmem120a PE=2
SV=1
Length = 343
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQ 59
+ +G +NV K + K+EY ++ ++ ++ T +L S + D
Sbjct: 111 LVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAA------- 163
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
+ L++ Y L +RE+IL NGS I+ WW++HHY + ++ V LTW P+ Q
Sbjct: 164 -FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQ 217
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVV 162
+ FL ++M Q LQ YQ LY ALG+ MD+
Sbjct: 218 KFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLT 260
>sp|Q8C1E7|T120A_MOUSE Transmembrane protein 120A OS=Mus musculus GN=Tmem120a PE=2 SV=1
Length = 343
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQ 59
+ +G +NV K + K+EY ++ ++ ++ T +L S + D
Sbjct: 111 LVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAA------- 163
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
+ L++ Y L +RE+IL NGS I+ WW++HHY + ++ V LTW P+ Q
Sbjct: 164 -FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQ 217
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVV 162
+ FL ++M Q LQ YQ LY ALG+ MD+
Sbjct: 218 KFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLT 260
>sp|Q05B45|T120A_BOVIN Transmembrane protein 120A OS=Bos taurus GN=TMEM120A PE=2 SV=1
Length = 343
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 23/251 (9%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQ 59
+ +G +NV K + K+EY ++ ++ +L T +L S + D
Sbjct: 111 LVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAA------- 163
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
+ L++ Y L +RE+IL NGS I+ WW++HHY + ++ V LTW P+ Q
Sbjct: 164 -FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQ 217
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----L 175
+ FL ++M Q LQ YQ LY ALG+ MD+ G +W
Sbjct: 218 KFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLT---VEGFQSWMWRGLTF 274
Query: 176 LCPILFILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSR 235
L P LF ++ + L L A EWQV CG +L+ +GNF T++ + K
Sbjct: 275 LLPFLFFGHFWQLFNALTLFNLARDPECKEWQVLMCGFPFLLLFLGNFFTTLRVVHQK-- 332
Query: 236 FKAKMKKSKSK 246
F ++ SK +
Sbjct: 333 FHNQLHGSKKE 343
>sp|Q9BXJ8|T120A_HUMAN Transmembrane protein 120A OS=Homo sapiens GN=TMEM120A PE=2 SV=1
Length = 343
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQ 59
+ +G +NV K + K+EY ++ ++ +L T +L S + D
Sbjct: 111 LVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAA------- 163
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
+ L++ Y L +RE+IL NGS I+ WW++HHY + ++ V LTW P+ Q
Sbjct: 164 -FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQ 217
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVV 162
+ FL ++M Q LQ YQ LY ALG+ MD+
Sbjct: 218 KFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLT 260
>sp|Q63ZG0|T120B_XENTR Transmembrane protein 120B OS=Xenopus tropicalis GN=tmem120b PE=2
SV=1
Length = 335
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQ 59
+ +G +NV + K+EY ++ ++ LL T +L + D +
Sbjct: 105 LVLGNVNVTLLSNQAKFAYKDEYEKFKLYLTIILLLGAITCRFVLHYRVTD--------E 156
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
++ L++ Y L +RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q
Sbjct: 157 VFNFLLVWYYCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQ 211
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVV 162
FL +++ Q LQ YQ LY ALG+ +D+
Sbjct: 212 IFRNQFLAFSIYQSCVQFLQYYYQSGCLYRLRALGERNHLDLT 254
>sp|Q5EAX9|T12BA_XENLA Transmembrane protein 120B-A OS=Xenopus laevis GN=tmem120b-a PE=2
SV=1
Length = 335
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 1 MFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQ 59
+ +G +NV + K+EY ++ ++ LL T +L + D +
Sbjct: 105 LVLGNVNVTLLSTQAKFAYKDEYEKFKLYLTIILLLGAITCRFVLNYRVTD--------E 156
Query: 60 LYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQ 119
++ L++ Y L +RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q
Sbjct: 157 VFNFLLVWYYCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQ 211
Query: 120 RGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVV 162
FL +++ Q LQ YQ LY ALG+ +D+
Sbjct: 212 IFRNQFLAFSIFQSCVQFLQYYYQSGCLYRLRALGERNHLDLT 254
>sp|Q9Z735|RIBD_CHLPN Riboflavin biosynthesis protein RibD OS=Chlamydia pneumoniae
GN=ribD PE=3 SV=1
Length = 376
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 20/124 (16%)
Query: 72 LALRENILRINGSDI----RPW------------WIYHHYCAMLMALVSLTWEIKGQPNC 115
LA++ + I+GSD+ P I H + +ALV ++ GQ
Sbjct: 59 LAIQNASMPISGSDVYVSLEPCSHFGSCPPCANLLIKHKVSRVFVALVDPDPKVAGQGIA 118
Query: 116 AQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQL-W 174
+Q G+Q+++ + A L YQR + L A +D G+ A G+ W
Sbjct: 119 MLRQAGIQVYVGIGESEAQASLQPYLYQRTHNFPWTILKSAASVD---GQVADSQGKSQW 175
Query: 175 LLCP 178
+ CP
Sbjct: 176 ITCP 179
>sp|Q5REQ1|HYAL3_PONAB Hyaluronidase-3 OS=Pongo abelii GN=HYAL3 PE=2 SV=1
Length = 414
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 59 QLYQAWLLFLYTGLALRENILRINGSDIRPW--WIYHHYCAMLMALVSLTWEIKGQPNCA 116
QLY+A+ F AL E+ LR+ +RP W ++HY A S+ G+ + A
Sbjct: 165 QLYKAYTGFEQAARALMEDTLRV-AQALRPHGLWGFYHYPACGNGWHSMASNYTGRCHAA 223
Query: 117 QKQRGVQLFLQWA 129
R QL WA
Sbjct: 224 TLARNTQLHWLWA 236
>sp|O43820|HYAL3_HUMAN Hyaluronidase-3 OS=Homo sapiens GN=HYAL3 PE=2 SV=1
Length = 417
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 59 QLYQAWLLFLYTGLALRENILRINGSDIRPW--WIYHHYCAMLMALVSLTWEIKGQPNCA 116
QLY+A+ F AL E+ LR+ +RP W ++HY A S+ G+ + A
Sbjct: 165 QLYKAYTGFEQAARALMEDTLRV-AQALRPHGLWGFYHYPACGNGWHSMASNYTGRCHAA 223
Query: 117 QKQRGVQLFLQWA 129
R QL WA
Sbjct: 224 TLARNTQLHWLWA 236
>sp|P77172|YFGF_ECOLI Cyclic di-GMP phosphodiesterase YfgF OS=Escherichia coli (strain
K12) GN=yfgF PE=1 SV=1
Length = 747
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 22/103 (21%)
Query: 124 LFLQWAMMQGVAM-LLQNRYQRQRLYTRIALG-----------------KAKRMDVVWGE 165
+F WA + G+A+ + +Y Y ++L +R +V G+
Sbjct: 58 MFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGD 117
Query: 166 TAGVDGQLW--LLCP--ILFILQGFEAYVGLLLLKTALVGVVP 204
T + +++ ++ P + IL F A+VGLL + LVGV+P
Sbjct: 118 TRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMP 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.140 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,392,602
Number of Sequences: 539616
Number of extensions: 3280729
Number of successful extensions: 8641
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8569
Number of HSP's gapped (non-prelim): 25
length of query: 249
length of database: 191,569,459
effective HSP length: 115
effective length of query: 134
effective length of database: 129,513,619
effective search space: 17354824946
effective search space used: 17354824946
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)