Query 025711
Match_columns 249
No_of_seqs 118 out of 192
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 15:56:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025711.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025711hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eln_A Cysteine dioxygenase ty 98.3 4.7E-06 1.6E-10 71.1 10.1 39 2-40 73-111 (200)
2 3uss_A Putative uncharacterize 98.0 2.1E-05 7.1E-10 68.1 9.2 38 2-40 76-113 (211)
3 2gm6_A Cysteine dioxygenase ty 98.0 3.1E-05 1.1E-09 66.2 9.6 38 2-40 82-119 (208)
4 3eqe_A Putative cystein deoxyg 97.9 7.1E-05 2.4E-09 62.6 9.5 36 3-38 73-108 (171)
5 2q30_A Uncharacterized protein 95.5 0.046 1.6E-06 38.8 7.0 32 3-34 37-69 (110)
6 4e2g_A Cupin 2 conserved barre 95.2 0.056 1.9E-06 39.8 6.7 32 2-34 44-75 (126)
7 2gu9_A Tetracenomycin polyketi 94.8 0.18 6E-06 35.7 8.3 32 3-34 25-58 (113)
8 2pfw_A Cupin 2, conserved barr 94.6 0.095 3.2E-06 37.9 6.4 27 159-187 81-107 (116)
9 3h8u_A Uncharacterized conserv 94.0 0.044 1.5E-06 40.5 3.6 33 2-34 42-74 (125)
10 2oa2_A BH2720 protein; 1017534 94.0 0.47 1.6E-05 36.6 9.6 33 3-35 47-79 (148)
11 3h7j_A Bacilysin biosynthesis 93.3 0.13 4.6E-06 43.2 5.8 31 3-34 149-180 (243)
12 1v70_A Probable antibiotics sy 92.1 0.096 3.3E-06 36.2 2.9 34 2-35 31-64 (105)
13 1x82_A Glucose-6-phosphate iso 91.1 0.89 3E-05 37.2 8.1 33 2-34 70-110 (190)
14 3lag_A Uncharacterized protein 91.0 0.1 3.5E-06 38.7 2.1 31 4-34 22-52 (98)
15 3fjs_A Uncharacterized protein 90.4 0.16 5.4E-06 37.9 2.7 32 2-34 39-70 (114)
16 2fqp_A Hypothetical protein BP 89.8 0.2 6.7E-06 36.0 2.7 33 3-35 22-54 (97)
17 3ht1_A REMF protein; cupin fol 89.5 0.11 3.7E-06 38.8 1.1 32 2-34 42-73 (145)
18 2y0o_A Probable D-lyxose ketol 89.4 1.1 3.7E-05 37.9 7.4 33 3-35 57-95 (175)
19 3rns_A Cupin 2 conserved barre 89.4 0.21 7.2E-06 41.6 3.0 33 2-35 40-72 (227)
20 2o1q_A Putative acetyl/propion 89.2 0.14 4.9E-06 40.4 1.7 30 2-32 47-76 (145)
21 3cjx_A Protein of unknown func 88.2 0.18 6.2E-06 41.6 1.8 31 2-33 46-76 (165)
22 3ebr_A Uncharacterized RMLC-li 87.6 0.22 7.7E-06 40.6 2.0 31 2-33 45-75 (159)
23 4h7l_A Uncharacterized protein 86.8 2 7E-05 35.7 7.4 30 158-191 94-123 (157)
24 1fi2_A Oxalate oxidase, germin 86.2 0.42 1.4E-05 39.2 2.8 35 3-37 76-110 (201)
25 3ibm_A Cupin 2, conserved barr 85.3 0.69 2.4E-05 37.1 3.6 32 2-34 59-90 (167)
26 2ozj_A Cupin 2, conserved barr 85.0 0.67 2.3E-05 33.6 3.2 32 2-34 41-72 (114)
27 3jzv_A Uncharacterized protein 84.1 0.4 1.4E-05 38.9 1.7 32 2-34 56-87 (166)
28 1yhf_A Hypothetical protein SP 83.6 0.7 2.4E-05 33.2 2.7 31 3-34 44-74 (115)
29 2q1z_B Anti-sigma factor CHRR, 83.6 0.78 2.7E-05 38.1 3.4 30 2-32 128-157 (195)
30 3i7d_A Sugar phosphate isomera 83.0 0.67 2.3E-05 36.8 2.6 34 2-35 46-80 (163)
31 2d40_A Z3393, putative gentisa 82.6 1.3 4.4E-05 39.9 4.7 31 2-33 103-133 (354)
32 3kgz_A Cupin 2 conserved barre 82.5 0.5 1.7E-05 37.9 1.7 32 2-34 47-78 (156)
33 1fxz_A Glycinin G1; proglycini 82.3 0.58 2E-05 44.6 2.3 36 2-37 341-376 (476)
34 3l2h_A Putative sugar phosphat 82.0 0.86 3E-05 35.3 2.9 32 3-34 50-82 (162)
35 3h7j_A Bacilysin biosynthesis 82.0 0.7 2.4E-05 38.8 2.5 34 1-35 36-69 (243)
36 2b8m_A Hypothetical protein MJ 81.8 0.83 2.8E-05 33.2 2.5 32 3-35 31-62 (117)
37 3rns_A Cupin 2 conserved barre 81.5 0.83 2.9E-05 38.0 2.8 32 2-34 156-187 (227)
38 2d5f_A Glycinin A3B4 subunit; 80.9 0.67 2.3E-05 44.4 2.3 36 2-37 370-405 (493)
39 1dgw_X Canavalin; duplicated s 80.5 0.71 2.4E-05 34.1 1.8 31 5-35 42-72 (79)
40 3cew_A Uncharacterized cupin p 80.2 0.81 2.8E-05 33.7 2.0 33 2-34 29-62 (125)
41 2vqa_A SLL1358 protein, MNCA; 80.2 0.82 2.8E-05 39.9 2.4 36 2-37 237-272 (361)
42 1o4t_A Putative oxalate decarb 80.2 0.84 2.9E-05 34.6 2.2 32 3-34 61-92 (133)
43 1dgw_A Canavalin; duplicated s 80.0 0.63 2.2E-05 37.7 1.5 35 2-37 44-78 (178)
44 2pa7_A DTDP-6-deoxy-3,4-keto-h 80.0 2.9 0.0001 33.8 5.4 36 3-38 39-74 (141)
45 3c3v_A Arachin ARAH3 isoform; 79.1 0.71 2.4E-05 44.7 1.8 36 2-37 375-410 (510)
46 1lr5_A Auxin binding protein 1 78.5 1 3.6E-05 35.0 2.3 32 3-35 45-76 (163)
47 3fz3_A Prunin; TREE NUT allerg 78.2 0.92 3.1E-05 44.4 2.3 35 3-37 398-432 (531)
48 2f4p_A Hypothetical protein TM 78.1 1.3 4.5E-05 34.4 2.8 32 2-34 51-82 (147)
49 2ozi_A Hypothetical protein RP 77.0 1.2 4E-05 33.2 2.1 32 3-34 21-52 (98)
50 1rc6_A Hypothetical protein YL 76.6 0.94 3.2E-05 38.3 1.6 33 2-34 182-214 (261)
51 3nw4_A Gentisate 1,2-dioxygena 73.4 3.4 0.00012 38.4 4.6 30 1-31 105-134 (368)
52 4b29_A Dimethylsulfoniopropion 73.3 1.6 5.6E-05 38.2 2.3 33 1-34 134-166 (217)
53 1j58_A YVRK protein; cupin, de 70.9 2 6.9E-05 37.9 2.4 34 3-36 261-294 (385)
54 2o8q_A Hypothetical protein; c 69.3 2.3 8E-05 31.5 2.1 30 6-35 50-79 (134)
55 1y3t_A Hypothetical protein YX 68.1 2.6 8.9E-05 35.8 2.4 33 3-35 50-82 (337)
56 2ea7_A 7S globulin-1; beta bar 68.0 1.8 6.2E-05 40.5 1.5 34 2-36 64-97 (434)
57 3es1_A Cupin 2, conserved barr 67.5 3.4 0.00011 34.4 2.9 32 2-34 82-113 (172)
58 2bnm_A Epoxidase; oxidoreducta 67.1 5 0.00017 31.7 3.7 32 3-35 121-155 (198)
59 3ksc_A LEGA class, prolegumin; 66.9 2.1 7.2E-05 41.3 1.8 34 4-37 363-396 (496)
60 3kgl_A Cruciferin; 11S SEED gl 65.6 2.1 7.2E-05 41.0 1.5 34 4-37 328-361 (466)
61 1sq4_A GLXB, glyoxylate-induce 65.3 4.4 0.00015 35.1 3.4 34 1-34 193-226 (278)
62 1y3t_A Hypothetical protein YX 65.2 4.9 0.00017 34.1 3.6 31 5-35 224-254 (337)
63 3qac_A 11S globulin SEED stora 64.5 3 0.0001 40.0 2.3 34 4-37 328-361 (465)
64 1uij_A Beta subunit of beta co 64.1 2.4 8.3E-05 39.3 1.6 33 2-35 52-84 (416)
65 1j58_A YVRK protein; cupin, de 63.8 3.2 0.00011 36.6 2.2 35 2-37 82-116 (385)
66 1sef_A Conserved hypothetical 62.5 6.4 0.00022 33.5 3.8 33 2-35 185-218 (274)
67 3ejk_A DTDP sugar isomerase; Y 60.5 50 0.0017 27.5 8.8 34 5-38 59-92 (174)
68 2vqa_A SLL1358 protein, MNCA; 58.8 5.6 0.00019 34.5 2.8 34 3-36 56-89 (361)
69 3o14_A Anti-ecfsigma factor, C 58.0 4.6 0.00016 34.5 2.1 29 3-32 47-75 (223)
70 1sfn_A Conserved hypothetical 58.0 8.9 0.0003 32.3 3.9 34 1-34 167-200 (246)
71 2cav_A Protein (canavalin); vi 57.8 4.3 0.00015 38.2 2.0 34 2-36 89-122 (445)
72 2e9q_A 11S globulin subunit be 57.3 4.7 0.00016 38.2 2.3 34 4-37 327-360 (459)
73 3bal_A Acetylacetone-cleaving 57.3 2.6 9.1E-05 34.8 0.5 36 2-38 49-84 (153)
74 3st7_A Capsular polysaccharide 57.0 82 0.0028 26.7 9.8 34 3-36 276-309 (369)
75 4i4a_A Similar to unknown prot 56.8 9.5 0.00032 27.7 3.4 32 3-35 38-69 (128)
76 1y9q_A Transcriptional regulat 56.3 36 0.0012 26.7 7.0 26 159-187 153-180 (192)
77 1vj2_A Novel manganese-contain 56.1 3.4 0.00012 30.7 0.9 31 3-34 52-82 (126)
78 2i45_A Hypothetical protein; n 54.1 5.2 0.00018 28.5 1.5 30 5-35 34-63 (107)
79 3bu7_A Gentisate 1,2-dioxygena 52.7 7 0.00024 36.5 2.6 31 2-33 297-327 (394)
80 2xlg_A SLL1785 protein, CUCA; 52.4 5.4 0.00018 34.4 1.6 32 4-35 48-79 (239)
81 2ea7_A 7S globulin-1; beta bar 50.5 7.2 0.00025 36.5 2.3 35 3-37 270-304 (434)
82 2cav_A Protein (canavalin); vi 49.9 7.5 0.00026 36.6 2.3 34 4-37 286-319 (445)
83 2phl_A Phaseolin; plant SEED s 45.6 9.5 0.00033 35.5 2.3 34 4-37 244-277 (397)
84 1uij_A Beta subunit of beta co 45.0 9.9 0.00034 35.3 2.3 35 3-37 253-287 (416)
85 3d82_A Cupin 2, conserved barr 44.8 17 0.00058 24.9 3.0 25 10-34 40-64 (102)
86 3kmh_A D-lyxose isomerase; cup 41.4 1.1E+02 0.0038 27.4 8.4 35 3-37 110-145 (246)
87 4e2q_A Ureidoglycine aminohydr 39.7 25 0.00086 31.1 3.9 33 1-34 188-221 (266)
88 2vec_A YHAK, pirin-like protei 33.7 19 0.00066 31.5 2.2 31 4-34 69-99 (256)
89 3lwc_A Uncharacterized protein 33.7 25 0.00087 26.5 2.6 33 1-35 42-74 (119)
90 1v70_A Probable antibiotics sy 32.2 55 0.0019 21.9 3.9 29 157-187 74-104 (105)
91 3h8u_A Uncharacterized conserv 31.1 50 0.0017 23.7 3.8 30 157-188 86-117 (125)
92 1juh_A Quercetin 2,3-dioxygena 30.0 40 0.0014 30.0 3.6 33 5-37 54-88 (350)
93 3bb6_A Uncharacterized protein 29.8 39 0.0013 27.4 3.2 30 8-37 23-56 (127)
94 2vpv_A Protein MIF2, MIF2P; nu 28.4 25 0.00087 29.0 2.0 34 2-35 91-125 (166)
95 2ixk_A DTDP-4-dehydrorhamnose 28.3 1.7E+02 0.0057 24.4 7.0 46 151-198 104-150 (184)
96 1tq5_A Protein YHHW; bicupin, 26.4 26 0.0009 30.2 1.8 31 4-34 46-76 (242)
97 3s7i_A Allergen ARA H 1, clone 26.0 31 0.0011 32.3 2.3 34 4-37 268-301 (418)
98 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 25.1 2.1E+02 0.0071 23.8 7.0 45 151-197 103-148 (185)
99 1sq4_A GLXB, glyoxylate-induce 24.6 26 0.00088 30.2 1.4 32 3-35 72-105 (278)
100 3bu7_A Gentisate 1,2-dioxygena 22.9 32 0.0011 32.0 1.7 31 2-33 126-156 (394)
101 2d40_A Z3393, putative gentisa 21.7 53 0.0018 29.4 2.8 31 3-34 272-302 (354)
No 1
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.27 E-value=4.7e-06 Score=71.10 Aligned_cols=39 Identities=28% Similarity=0.510 Sum_probs=36.3
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEeeccc
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDWVV 40 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd~v~ 40 (249)
-+|+.+||...|+|||.+..++.+||.|.++.+.|+|.+
T Consensus 73 ~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~ 111 (200)
T 3eln_A 73 MILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPD 111 (200)
T ss_dssp EEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCC
T ss_pred EEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCC
Confidence 368999999999999999999999999999999999854
No 2
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=98.02 E-value=2.1e-05 Score=68.11 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=35.7
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEeeccc
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDWVV 40 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd~v~ 40 (249)
-+|+.++|...|+|||. +.++.+||.|.++.+.|+|.+
T Consensus 76 ~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~ 113 (211)
T 3uss_A 76 VSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDA 113 (211)
T ss_dssp EEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECT
T ss_pred EEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCC
Confidence 47899999999999999 999999999999999999875
No 3
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=97.98 E-value=3.1e-05 Score=66.19 Aligned_cols=38 Identities=18% Similarity=0.175 Sum_probs=35.2
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEeeccc
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDWVV 40 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd~v~ 40 (249)
-+++.+||...|+|||++ .++.+||.|+++.+-|+|.+
T Consensus 82 ~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~ 119 (208)
T 2gm6_A 82 VSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDG 119 (208)
T ss_dssp EEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECT
T ss_pred EEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCC
Confidence 368899999999999997 99999999999999999864
No 4
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=97.86 E-value=7.1e-05 Score=62.63 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=34.7
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEeec
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDW 38 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd~ 38 (249)
+++.+||...|+|||.+-.++.+||.|++..+.|+|
T Consensus 73 ~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~ 108 (171)
T 3eqe_A 73 VINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRS 108 (171)
T ss_dssp EEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEE
T ss_pred EEEECCCCCcccccCCCceEEEEEEeeeEEEEEeec
Confidence 688999999999999999999999999999999996
No 5
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=95.52 E-value=0.046 Score=38.81 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=24.5
Q ss_pred eeecCCCCcccCCCCCC-CeeeeeeeecceEEE
Q 025711 3 IFCLPPSGVIPLHNHPG-MTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPg-MtvlsKvLyGsl~v~ 34 (249)
.+.+++|..+|.|.|+. ..++.-||.|++.+.
T Consensus 37 ~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~ 69 (110)
T 2q30_A 37 SFTFKAGQELPVHSHNIEGELNIVVLEGEGEFV 69 (110)
T ss_dssp EEEECTTCEEEEECCSSSCEEEEEEEESCEEEE
T ss_pred EEEECCCCcCCcccCCCCccEEEEEEeCEEEEE
Confidence 45678888899999986 555577888888764
No 6
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=95.19 E-value=0.056 Score=39.81 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=27.4
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
..+.+++|..+|.|.|++ .-+.-||-|++.+.
T Consensus 44 ~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~ 75 (126)
T 4e2g_A 44 NWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELT 75 (126)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEEEEECEEEE
T ss_pred EEEEECCCCcCCCccCCC-ceEEEEEEeEEEEE
Confidence 356799999999999998 67888999999874
No 7
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=94.84 E-value=0.18 Score=35.68 Aligned_cols=32 Identities=13% Similarity=0.071 Sum_probs=28.3
Q ss_pred eeecCCCCcccCC--CCCCCeeeeeeeecceEEE
Q 025711 3 IFCLPPSGVIPLH--NHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~g~~IPLH--DHPgMtvlsKvLyGsl~v~ 34 (249)
.+.+++|..+|.| .|++..-+.-||.|++.+.
T Consensus 25 ~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~ 58 (113)
T 2gu9_A 25 EMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAI 58 (113)
T ss_dssp EEEECTTCEEECCCSSSCCCEEEEEEEECCEEEE
T ss_pred EEEECCCCccCCcccccCCCcEEEEEEeCEEEEE
Confidence 4568999999999 9998888999999999875
No 8
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=94.59 E-value=0.095 Score=37.89 Aligned_cols=27 Identities=22% Similarity=0.317 Sum_probs=23.0
Q ss_pred eEeecCCCCCeeEeeecCceeEeEeeCCC
Q 025711 159 SILYPADGGNMHCFTAVTACAVLDVLGPP 187 (249)
Q Consensus 159 ~vL~P~~ggNlH~ftAv~pcAfLDIL~PP 187 (249)
+++.|. +-.|.+.+.++|-+|.|++|+
T Consensus 81 ~~~ip~--~~~H~~~~~~~~~~l~v~~p~ 107 (116)
T 2pfw_A 81 SFFVPP--HVDHGAVCPTGGILIDTFSPA 107 (116)
T ss_dssp EEEECT--TCCEEEEESSCEEEEEEEESC
T ss_pred EEEECc--CCceeeEeCCCcEEEEEECCc
Confidence 356664 789999999999999999998
No 9
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=94.03 E-value=0.044 Score=40.47 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=28.7
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
..+.+++|..+|.|.|++..-+.-||.|++.+.
T Consensus 42 ~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~ 74 (125)
T 3h8u_A 42 VVWHAHPGQEIASHVHPHGQDTWTVISGEAEYH 74 (125)
T ss_dssp EEEEECTTCEECCC-CTTCEEEEEEEECEEEEE
T ss_pred EEEEECCCCcCCcccCCCCeEEEEEEEeEEEEE
Confidence 357799999999999999999999999999873
No 10
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=93.97 E-value=0.47 Score=36.57 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=29.5
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
++.+++|..+|.|.|++..-+.-||.|++.+.-
T Consensus 47 ~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i 79 (148)
T 2oa2_A 47 LMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQM 79 (148)
T ss_dssp EEEECTTCBCCCBCCTTCEEEEEEEESEEEEEE
T ss_pred EEEECCCCccCceECCCCcEEEEEEeCEEEEEE
Confidence 567899999999999999889999999999764
No 11
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=93.28 E-value=0.13 Score=43.17 Aligned_cols=31 Identities=19% Similarity=0.406 Sum_probs=25.2
Q ss_pred eeecCC-CCcccCCCCCCCeeeeeeeecceEEE
Q 025711 3 IFCLPP-SGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~-g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
+..|++ |+.+|+|.|++.. +.-||.|++.++
T Consensus 149 ~~~~~p~g~~~~~H~H~~~e-~~~Vl~G~~~~~ 180 (243)
T 3h7j_A 149 LAKIPGNGGEMPFHKHRNEQ-IGICIGGGYDMT 180 (243)
T ss_dssp EEEECTTTEEEEEECCSSEE-EEEECSSCEEEE
T ss_pred EEEECCCCCcCCCEeCCCcE-EEEEEECEEEEE
Confidence 344889 9999999999764 566999999875
No 12
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=92.15 E-value=0.096 Score=36.18 Aligned_cols=34 Identities=21% Similarity=0.347 Sum_probs=29.5
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
..+.+++|..+|.|.|++..-+.-||.|++.+..
T Consensus 31 ~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~ 64 (105)
T 1v70_A 31 DLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV 64 (105)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE
T ss_pred EEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE
Confidence 3567899999999999998888889999998753
No 13
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=91.08 E-value=0.89 Score=37.18 Aligned_cols=33 Identities=21% Similarity=0.081 Sum_probs=27.9
Q ss_pred ceeecCCCCc------ccCCCCC--CCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGV------IPLHNHP--GMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~------IPLHDHP--gMtvlsKvLyGsl~v~ 34 (249)
++..|++|.. .|+|.|+ +..=+.-||.|++.+.
T Consensus 70 ~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~ 110 (190)
T 1x82_A 70 ATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGML 110 (190)
T ss_dssp EEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEE
T ss_pred EEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEE
Confidence 5668999999 8999999 5678888999998865
No 14
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=90.95 E-value=0.1 Score=38.71 Aligned_cols=31 Identities=29% Similarity=0.342 Sum_probs=27.3
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
+.++||+.+|+|-|+.-..+--|+-|+++|.
T Consensus 22 ~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~ 52 (98)
T 3lag_A 22 WRLPPGSATGHHTHGMDYVVVPMADGEMTIV 52 (98)
T ss_dssp EEECTTEECCSEECCSCEEEEESSCBC-CEE
T ss_pred EEECCCCccCcEECCCcEEEEEEeccEEEEE
Confidence 5689999999999999999988999999874
No 15
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=90.43 E-value=0.16 Score=37.94 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=28.4
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
..+.+++|..+|.|.|++. -+.-||.|++.+.
T Consensus 39 ~~~~l~~G~~~~~H~H~~~-e~~~Vl~G~~~~~ 70 (114)
T 3fjs_A 39 MRMVLPAGKQVGSHSVAGP-STIQCLEGEVEIG 70 (114)
T ss_dssp EEEEECTTCEEEEECCSSC-EEEEEEESCEEEE
T ss_pred EEEEECCCCccCceeCCCc-EEEEEEECEEEEE
Confidence 3578999999999999996 7889999999975
No 16
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=89.78 E-value=0.2 Score=35.97 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=28.8
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
.+.+++|+.+++|-|++-.-+.-||.|++.+..
T Consensus 22 ~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~ 54 (97)
T 2fqp_A 22 EWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET 54 (97)
T ss_dssp EEEECTTCBCCSEECCSCEEEEESSCEEEEEEE
T ss_pred EEEECCCCCCCCEECCCCcEEEEEeecEEEEEe
Confidence 456899999999999998778899999999753
No 17
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=89.47 E-value=0.11 Score=38.78 Aligned_cols=32 Identities=28% Similarity=0.361 Sum_probs=28.0
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
..+.+++|..+|.|-|++...+. ||-|++.+.
T Consensus 42 ~~~~~~pg~~~~~H~H~~~e~~~-vl~G~~~~~ 73 (145)
T 3ht1_A 42 TEFEVSPNGSTPPHFHEWEHEIY-VLEGSMGLV 73 (145)
T ss_dssp EEEEEEEEEECCCEECSSCEEEE-EEEECEEEE
T ss_pred EEEEECCCCcCCCccCCCceEEE-EEEeEEEEE
Confidence 35678999999999999999975 999999875
No 18
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=89.41 E-value=1.1 Score=37.93 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=25.7
Q ss_pred eeecCCCCcccCCCCCC------CeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVIPLHNHPG------MTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPg------MtvlsKvLyGsl~v~S 35 (249)
+..|.+|++.|+|-||. ..==..++.|.+.+..
T Consensus 57 ~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~ 95 (175)
T 2y0o_A 57 ELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV 95 (175)
T ss_dssp EEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE
T ss_pred EEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE
Confidence 46788899999999998 5544448899977654
No 19
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=89.41 E-value=0.21 Score=41.62 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=28.7
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
.+|.|++|..||.|.||+ ..+.-||-|++.+.-
T Consensus 40 ~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i 72 (227)
T 3rns_A 40 SLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFI 72 (227)
T ss_dssp EEEEECTTCEEEECSCSS-CEEEEEEESEEEEEE
T ss_pred EEEEECCCCccCccccCC-CEEEEEEeCEEEEEE
Confidence 578999999999999996 567789999998864
No 20
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=89.16 E-value=0.14 Score=40.41 Aligned_cols=30 Identities=30% Similarity=0.328 Sum_probs=26.4
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMH 32 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~ 32 (249)
.+|-+++|+.+|.|.|++-.- .=||.|++.
T Consensus 47 ~~~~~~pG~~~p~H~H~~~ee-~~VL~G~~~ 76 (145)
T 2o1q_A 47 AIFDCPAGSSFAAHVHVGPGE-YFLTKGKMD 76 (145)
T ss_dssp EEEEECTTEEECCEEESSCEE-EEEEEEEEE
T ss_pred EEEEECCCCCCCccCCCCCEE-EEEEEeEEE
Confidence 467899999999999998666 689999987
No 21
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=88.24 E-value=0.18 Score=41.59 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=25.8
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHI 33 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v 33 (249)
.+|-+++|+.+|.|.||+..-+ =||.|+++.
T Consensus 46 ~lvr~~pG~~~p~H~H~g~ee~-~VL~G~f~~ 76 (165)
T 3cjx_A 46 MRASFAPGLTLPLHFHTGTVHM-YTISGCWYY 76 (165)
T ss_dssp EEEEECTTCBCCEEEESSCEEE-EEEESEEEE
T ss_pred EEEEECCCCcCCcccCCCCEEE-EEEEEEEEE
Confidence 4677999999999999996544 499999874
No 22
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=87.63 E-value=0.22 Score=40.57 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=25.7
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHI 33 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v 33 (249)
.++-+++|+.+|.|.|||- ...=||.|+.+.
T Consensus 45 ~lvr~~pG~~~p~H~H~g~-ee~~VL~G~~~~ 75 (159)
T 3ebr_A 45 TLLKAPAGMEMPRHHHTGT-VIVYTVQGSWRY 75 (159)
T ss_dssp EEEEECSSCBCCCEEESSC-EEEEEEESCEEE
T ss_pred EEEEECCCCCcccccCCCC-EEEEEEEeEEEE
Confidence 4677999999999999995 445599999873
No 23
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=86.85 E-value=2 Score=35.66 Aligned_cols=30 Identities=17% Similarity=0.445 Sum_probs=24.0
Q ss_pred eeEeecCCCCCeeEeeecCceeEeEeeCCCCCCC
Q 025711 158 TSILYPADGGNMHCFTAVTACAVLDVLGPPYSDS 191 (249)
Q Consensus 158 t~vL~P~~ggNlH~ftAv~pcAfLDIL~PPY~~~ 191 (249)
.+++-|. |-.|++. .++-||-|++|||+..
T Consensus 94 D~v~IPp--g~~H~i~--g~l~~L~I~~Pp~~~e 123 (157)
T 4h7l_A 94 LAISIPP--LVRHRIV--GEATIINIVSPPFDPA 123 (157)
T ss_dssp EEEEECT--TCCEEEE--SCEEEEEEEESSCCTT
T ss_pred CEEEECC--CCeEeeE--CCEEEEEEECCCCCCC
Confidence 3466674 8899997 4799999999999864
No 24
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=86.17 E-value=0.42 Score=39.19 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=30.5
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
...+++|+.+|+|.||+..-+.-||.|++.+.-.+
T Consensus 76 ~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~ 110 (201)
T 1fi2_A 76 RVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILG 110 (201)
T ss_dssp EEEECTTCEEEEEECTTCCEEEEEEESEEEEEEEC
T ss_pred EEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEc
Confidence 34689999999999999999999999999986553
No 25
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=85.25 E-value=0.69 Score=37.10 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=26.6
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.++.+++|..+|+|.|+... +.=||.|++.+.
T Consensus 59 ~~~~l~pG~~~~~H~H~~~E-~~~Vl~G~~~~~ 90 (167)
T 3ibm_A 59 RYFEVEPGGYTTLERHEHTH-VVMVVRGHAEVV 90 (167)
T ss_dssp EEEEECTTCBCCCBBCSSCE-EEEEEESEEEEE
T ss_pred EEEEECCCCCCCCccCCCcE-EEEEEeCEEEEE
Confidence 46789999999999998655 555999999875
No 26
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=85.05 E-value=0.67 Score=33.56 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=26.8
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.+|.+++|..+|.|.|++.. +.-||.|++.+.
T Consensus 41 ~~~~~~~g~~~~~H~h~~~e-~~~vl~G~~~~~ 72 (114)
T 2ozj_A 41 SLFSFADGESVSEEEYFGDT-LYLILQGEAVIT 72 (114)
T ss_dssp EEEEEETTSSCCCBCCSSCE-EEEEEEEEEEEE
T ss_pred EEEEECCCCccccEECCCCe-EEEEEeCEEEEE
Confidence 35678999999999999754 778999999865
No 27
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=84.08 E-value=0.4 Score=38.94 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=27.3
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.+|.+++|..+|+|-|+...+ .-||.|++.+.
T Consensus 56 ~~~~l~pG~~~~~H~H~~~E~-~~Vl~G~~~~~ 87 (166)
T 3jzv_A 56 RYFEVGPGGHSTLERHQHAHG-VMILKGRGHAM 87 (166)
T ss_dssp EEEEEEEEEECCCBBCSSCEE-EEEEEECEEEE
T ss_pred EEEEECCCCccCceeCCCcEE-EEEEeCEEEEE
Confidence 467789999999999999865 55999999875
No 28
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=83.62 E-value=0.7 Score=33.16 Aligned_cols=31 Identities=29% Similarity=0.489 Sum_probs=27.3
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.+.+++|..+|.|.|++ .-+.-||.|++.+.
T Consensus 44 ~~~~~~g~~~~~H~H~~-~e~~~vl~G~~~~~ 74 (115)
T 1yhf_A 44 VFSLDKGQEIGRHSSPG-DAMVTILSGLAEIT 74 (115)
T ss_dssp EEEECTTCEEEEECCSS-EEEEEEEESEEEEE
T ss_pred EEEECCCCccCCEECCC-cEEEEEEeCEEEEE
Confidence 56789999999999996 68888999999876
No 29
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=83.62 E-value=0.78 Score=38.13 Aligned_cols=30 Identities=23% Similarity=0.565 Sum_probs=24.9
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMH 32 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~ 32 (249)
.++-+++|+.+|.|.|+|. =+.=||.|+..
T Consensus 128 ~l~~~~pG~~~p~H~H~g~-E~~~VL~G~f~ 157 (195)
T 2q1z_B 128 RLLWIPGGQAVPDHGHRGL-ELTLVLQGAFR 157 (195)
T ss_dssp EEEEECTTCBCCCCCCSSC-EEEEEEESEEE
T ss_pred EEEEECCCCCCCCcCCCCe-EEEEEEEEEEE
Confidence 4677999999999999987 55568999854
No 30
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=82.95 E-value=0.67 Score=36.85 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=29.3
Q ss_pred ceeecCCCCcc-cCCCCCCCeeeeeeeecceEEEE
Q 025711 2 GIFCLPPSGVI-PLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 2 gIF~Lp~g~~I-PLHDHPgMtvlsKvLyGsl~v~S 35 (249)
.++.|++|... |.|.|+++.-+.-||.|++.+..
T Consensus 46 ~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~ 80 (163)
T 3i7d_A 46 NLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD 80 (163)
T ss_dssp EEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE
T ss_pred EEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE
Confidence 46678999976 89999999889999999999763
No 31
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=82.64 E-value=1.3 Score=39.93 Aligned_cols=31 Identities=23% Similarity=0.353 Sum_probs=26.4
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHI 33 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v 33 (249)
+++.|++|..+|+|-|+.- -+.-||.|+..+
T Consensus 103 ~~~~l~PG~~~~~H~H~~~-e~~yVl~G~g~~ 133 (354)
T 2d40_A 103 GLQLIMPGEVAPSHRHNQS-ALRFIVEGKGAF 133 (354)
T ss_dssp EEEEECTTCEEEEEEESSC-EEEEEEECSSCE
T ss_pred EEEEECCCCCcCCeecCcc-eEEEEEEEEEEE
Confidence 5678999999999999865 777889998876
No 32
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=82.45 E-value=0.5 Score=37.88 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=27.4
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.+|.+++|..+|+|.|+...+ .=||.|++.+.
T Consensus 47 ~~~~l~pG~~~~~H~H~~~E~-~~Vl~G~~~v~ 78 (156)
T 3kgz_A 47 RYFEVDEGGYSTLERHAHVHA-VMIHRGHGQCL 78 (156)
T ss_dssp EEEEEEEEEECCCBBCSSCEE-EEEEEEEEEEE
T ss_pred EEEEECCCCccCceeCCCcEE-EEEEeCEEEEE
Confidence 467789999999999999875 56999999985
No 33
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=82.27 E-value=0.58 Score=44.57 Aligned_cols=36 Identities=14% Similarity=0.062 Sum_probs=31.8
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..+.|++|+.+|+|.||.-+=+.=||.|++.+.-.+
T Consensus 341 ~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~ 376 (476)
T 1fxz_A 341 EFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVN 376 (476)
T ss_dssp EEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEEC
T ss_pred EEEEecCCceecceECCCCCEEEEEEeCEEEEEEEe
Confidence 456799999999999999999999999999987654
No 34
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=82.04 E-value=0.86 Score=35.29 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=28.5
Q ss_pred eeecCCCC-cccCCCCCCCeeeeeeeecceEEE
Q 025711 3 IFCLPPSG-VIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~g~-~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
++.|++|. .+|.|.|+...-+.-||.|++.+.
T Consensus 50 ~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~ 82 (162)
T 3l2h_A 50 LIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLT 82 (162)
T ss_dssp EEEECTTCBSSSSBEESSCCEEEEEEESCEEEE
T ss_pred EEEECCCCcCCCCccCCCCCEEEEEEEEEEEEE
Confidence 46789999 599999988889999999999986
No 35
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=82.04 E-value=0.7 Score=38.77 Aligned_cols=34 Identities=15% Similarity=0.315 Sum_probs=28.5
Q ss_pred CceeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 1 MGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 1 mgIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
|.+|.+++|+.+|.|.||+. -+.-||.|++.+..
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~-e~~~Vl~G~~~~~~ 69 (243)
T 3h7j_A 36 VLMSYVPPHTNVEPHQHKEV-QIGMVVSGELMMTV 69 (243)
T ss_dssp EEEEEECTTEEEEEECCSSE-EEEEEEESEEEEEE
T ss_pred EEEEEECCCCccCCEECCCc-EEEEEEEeEEEEEE
Confidence 45788999999999999964 56679999999764
No 36
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=81.79 E-value=0.83 Score=33.21 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=25.8
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
++.+++|..+|.|.|+... +.=||.|++.+.-
T Consensus 31 ~~~~~pg~~~~~H~H~~~e-~~~Vl~G~~~~~i 62 (117)
T 2b8m_A 31 HIVLPRGEQMPKHYSNSYV-HLIIIKGEMTLTL 62 (117)
T ss_dssp EEEEETTCBCCCEECSSCE-EEEEEESEEEEEE
T ss_pred EEEECCCCcCCCEeCCCcE-EEEEEeCEEEEEE
Confidence 4568899999999998765 4559999998753
No 37
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=81.48 E-value=0.83 Score=38.00 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=27.9
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.++.+++|..+|.|.||+ .-+.-||-|++.+.
T Consensus 156 ~~~~~~~G~~~~~H~H~~-~e~~~Vl~G~~~~~ 187 (227)
T 3rns_A 156 TIMSFWKGESLDPHKAPG-DALVTVLDGEGKYY 187 (227)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEEEEEEEEEE
T ss_pred EEEEECCCCccCCEECCC-cEEEEEEeEEEEEE
Confidence 478899999999999995 45788999999875
No 38
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=80.93 E-value=0.67 Score=44.37 Aligned_cols=36 Identities=11% Similarity=0.096 Sum_probs=31.5
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..+.|++|+.+|+|.||.-+=+.=||.|++.+.-.+
T Consensus 370 a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~ 405 (493)
T 2d5f_A 370 QYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVN 405 (493)
T ss_dssp EEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEEC
T ss_pred EEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEc
Confidence 456689999999999999999999999999987654
No 39
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=80.49 E-value=0.71 Score=34.07 Aligned_cols=31 Identities=13% Similarity=0.071 Sum_probs=28.3
Q ss_pred ecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 5 CLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 5 ~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
-|.+|+.+|.|.||.-+-+.=|+.|++.|.-
T Consensus 42 ~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 42 QMNEGALFVPHYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp EECTTCEEEEEEESSCEEEEEEEESCEEEEE
T ss_pred EEcCCcCcCCccCCCCcEEEEEEeceEEEEE
Confidence 3789999999999999999999999998864
No 40
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=80.19 E-value=0.81 Score=33.75 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=28.4
Q ss_pred ceeecCCCCccc-CCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIP-LHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IP-LHDHPgMtvlsKvLyGsl~v~ 34 (249)
.++.+++|..+| .|.|++...+.=||.|++.+.
T Consensus 29 ~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~ 62 (125)
T 3cew_A 29 SINHLPAGAGVPFVHSHKQNEEIYGILSGKGFIT 62 (125)
T ss_dssp EEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEE
T ss_pred EEEEECCCCCCCCCccCCCceEEEEEEeCEEEEE
Confidence 456789999999 999999877777999999875
No 41
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=80.18 E-value=0.82 Score=39.86 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=31.3
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
.++.|++|+.+|.|.|++..-+.-||-|++.+.-++
T Consensus 237 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~ 272 (361)
T 2vqa_A 237 ALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFA 272 (361)
T ss_dssp EEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEEC
T ss_pred EEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEc
Confidence 356799999999999999888889999999987654
No 42
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=80.16 E-value=0.84 Score=34.63 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=28.6
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.+.+++|..+|.|-|++..-+.=||.|++.+.
T Consensus 61 ~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~ 92 (133)
T 1o4t_A 61 RMKLPPGSSVGLHKHEGEFEIYYILLGEGVFH 92 (133)
T ss_dssp EEEECTTCEEEEEECCSEEEEEEEEESEEEEE
T ss_pred EEEECCCCccCceECCCccEEEEEEeCEEEEE
Confidence 45689999999999999888999999999875
No 43
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=79.98 E-value=0.63 Score=37.70 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=30.7
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..+.|++|+.+|.| ||+..=+.=||.|++.+.-.+
T Consensus 44 ~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 44 LEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp EEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred EEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 35678999999999 999999999999999987653
No 44
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=79.97 E-value=2.9 Score=33.82 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=32.0
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEeec
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDW 38 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd~ 38 (249)
|+..|+|.+..-|-|..++=+.=+|.|+++|.-+|+
T Consensus 39 ~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg 74 (141)
T 2pa7_A 39 IFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG 74 (141)
T ss_dssp EESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS
T ss_pred EEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC
Confidence 345789999999999999999999999999999764
No 45
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=79.06 E-value=0.71 Score=44.67 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=31.6
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..+.|++|+.+|+|.||.-+=+.=||.|++.+.-.+
T Consensus 375 a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~ 410 (510)
T 3c3v_A 375 EYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVD 410 (510)
T ss_dssp EEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEEC
T ss_pred EEEEecCCceecceECCCCCEEEEEEeCEEEEEEEe
Confidence 346789999999999999999999999999987554
No 46
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=78.49 E-value=1 Score=34.95 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=27.2
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
++.+++|..+|+|.|+... +.-||.|++.+.-
T Consensus 45 ~~~~~pg~~~~~H~H~~~E-~~~Vl~G~~~~~~ 76 (163)
T 1lr5_A 45 LQTISPGQRTPIHRHSCEE-VFTVLKGKGTLLM 76 (163)
T ss_dssp EEEECTTCBCCEEEESSCE-EEEEEECCEEEEE
T ss_pred EEEECCCCcCCCeECCCCe-EEEEEeCEEEEEE
Confidence 4568999999999999876 7779999998764
No 47
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=78.19 E-value=0.92 Score=44.43 Aligned_cols=35 Identities=9% Similarity=0.077 Sum_probs=31.5
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..-|.+|+++|+|.||.-+-+.=||.|++.|.-.+
T Consensus 398 ~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~ 432 (531)
T 3fz3_A 398 RGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVN 432 (531)
T ss_dssp EEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEEC
T ss_pred EEEeecCccccceEcCCCCEEEEEEeCcEEEEEEe
Confidence 45689999999999999999999999999997764
No 48
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=78.13 E-value=1.3 Score=34.38 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=27.7
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
..+.+++|..+|.|-|++ .-+.-||.|++.+.
T Consensus 51 ~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~ 82 (147)
T 2f4p_A 51 YDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQ 82 (147)
T ss_dssp EEEEECTTCEECSEECTT-CEEEEEEEEEEEEE
T ss_pred EEEEECCCCccCceECCC-ceEEEEEeCEEEEE
Confidence 356789999999999999 56888999999875
No 49
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=77.04 E-value=1.2 Score=33.24 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=26.3
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
-|.|+||+.++.|.|+.=+++.=++-|.+.+.
T Consensus 21 ~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~ 52 (98)
T 2ozi_A 21 EWRLPPGSATGHHTHGMDYVVVPMADGEMTIV 52 (98)
T ss_dssp EEEECTTEECCSEECCSCEEEEESSCBC-CEE
T ss_pred EEEECCCCccCcEeCCCCEEEEEEeeEEEEEE
Confidence 46799999999999998877777788988864
No 50
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=76.62 E-value=0.94 Score=38.26 Aligned_cols=33 Identities=12% Similarity=0.009 Sum_probs=29.8
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.++.+++|+.+|.|-|+++.=+.-||.|++.+.
T Consensus 182 ~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~ 214 (261)
T 1rc6_A 182 HILSFAPGASHGYIETHVQEHGAYILSGQGVYN 214 (261)
T ss_dssp EEEEECTTCCBEEEEEESSCEEEEEEESEEEEE
T ss_pred EEEEECCCCccCcccCCCceEEEEEEEeEEEEE
Confidence 467799999999999999988999999999875
No 51
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=73.39 E-value=3.4 Score=38.42 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=24.4
Q ss_pred CceeecCCCCcccCCCCCCCeeeeeeeecce
Q 025711 1 MGIFCLPPSGVIPLHNHPGMTVFSKLLFGTM 31 (249)
Q Consensus 1 mgIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl 31 (249)
++++.|++|..+|.|-|..- -+--||-|+.
T Consensus 105 a~~~~l~PG~~~~~HrH~~~-ev~~VleG~G 134 (368)
T 3nw4_A 105 AAIQYLGPRETAPEHRHSQN-AFRFVVEGEG 134 (368)
T ss_dssp EEEEEECTTCEEEEEEESSC-EEEECSSCEE
T ss_pred EEEEEECCCCccCceecccc-eEEEEEecce
Confidence 36889999999999999864 5566888865
No 52
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=73.28 E-value=1.6 Score=38.23 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=27.3
Q ss_pred CceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 1 MGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 1 mgIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
+|+.+|++|...|.|.||+ .=+.-||.|.+.++
T Consensus 134 lG~v~l~PG~~yP~HsHp~-EEiy~VLsG~~e~~ 166 (217)
T 4b29_A 134 VTVGYWGPGLDYGWHEHLP-EELYSVVSGRALFH 166 (217)
T ss_dssp EEEEEECSSCEEEEEECSS-EEEEEEEEECEEEE
T ss_pred EEEEEECCCCcCCCCCCCC-ceEEEEEeCCEEEE
Confidence 4788999999999999997 46667889987653
No 53
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=70.86 E-value=2 Score=37.91 Aligned_cols=34 Identities=18% Similarity=0.428 Sum_probs=29.7
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEe
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSY 36 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SY 36 (249)
+..|++|+.+++|-|++..-+.-||.|++.+.-.
T Consensus 261 ~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~ 294 (385)
T 1j58_A 261 LVTVEPGAMRELHWHPNTHEWQYYISGKARMTVF 294 (385)
T ss_dssp EEEECTTCEEEEEECSSSCEEEEEEESEEEEEEE
T ss_pred EEEECCCcccCceeCCCCCEEEEEEeCeEEEEEE
Confidence 4568999999999999988888899999998754
No 54
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=69.29 E-value=2.3 Score=31.48 Aligned_cols=30 Identities=13% Similarity=-0.014 Sum_probs=21.9
Q ss_pred cCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 6 LPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 6 Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
+|+|...|+|-|++..-+.-||.|++.+.-
T Consensus 50 ~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~ 79 (134)
T 2o8q_A 50 PGKEAKPTWHTHTVGFQLFYVLRGWVEFEY 79 (134)
T ss_dssp C-----CCCEEECCSCEEEEEEESEEEEEE
T ss_pred cCCCCCCCCEECCCCcEEEEEEeCEEEEEE
Confidence 358999999999998888889999998753
No 55
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=68.13 E-value=2.6 Score=35.80 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=28.7
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
++.+++|..+|+|.|++..-+.=||.|++.+..
T Consensus 50 ~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~ 82 (337)
T 1y3t_A 50 LLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL 82 (337)
T ss_dssp EEEECTTCEEEEEECTTCCEEEEEEESCEEEEE
T ss_pred EEEeCCCCCCCceeCCCceEEEEEEECEEEEEE
Confidence 567899999999999977788889999999864
No 56
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=67.99 E-value=1.8 Score=40.52 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=30.7
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEe
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSY 36 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SY 36 (249)
+.+.|+||+.+|+| ||+..-+.=||.|++.+...
T Consensus 64 ~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v 97 (434)
T 2ea7_A 64 VEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLV 97 (434)
T ss_dssp EEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEE
T ss_pred EEEEecCCcCccCc-cCCCceEEEEEecEEEEEEE
Confidence 46789999999999 99999999999999988754
No 57
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=67.55 E-value=3.4 Score=34.38 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=27.2
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.++.|++|+..|+|-|++.-.+ -||-|++.+.
T Consensus 82 ~~v~l~PG~~~~~H~H~~eE~~-~VLeGel~l~ 113 (172)
T 3es1_A 82 RVVDMLPGKESPMHRTNSIDYG-IVLEGEIELE 113 (172)
T ss_dssp EEEEECTTCBCCCBCCSEEEEE-EEEESCEEEE
T ss_pred EEEEECCCCCCCCeecCceEEE-EEEeCEEEEE
Confidence 3567999999999999987644 8999999974
No 58
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=67.11 E-value=5 Score=31.67 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=26.4
Q ss_pred eeecCCCCccc---CCCCCCCeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVIP---LHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~IP---LHDHPgMtvlsKvLyGsl~v~S 35 (249)
.+.+++|+..+ .|.|++ .-+.-||.|++.+.-
T Consensus 121 ~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~ 155 (198)
T 2bnm_A 121 VVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKW 155 (198)
T ss_dssp EEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEE
T ss_pred EEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEE
Confidence 34689999988 799999 577789999998753
No 59
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=66.89 E-value=2.1 Score=41.32 Aligned_cols=34 Identities=12% Similarity=0.072 Sum_probs=30.9
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
.-|.+|+++|+|.||.-+-+.=||.|+++|.-.+
T Consensus 363 v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~ 396 (496)
T 3ksc_A 363 GSLHKNAMFVPHYNLNANSIIYALKGRARLQVVN 396 (496)
T ss_dssp EEEETTCEEEEEEESSCCEEEEEEESEEEEEEEC
T ss_pred EEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEe
Confidence 3478999999999999999999999999998765
No 60
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=65.56 E-value=2.1 Score=41.01 Aligned_cols=34 Identities=6% Similarity=0.060 Sum_probs=30.8
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
.-|.+|+++|+|.||.-+-+.=||.|+++|.-.+
T Consensus 328 v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~ 361 (466)
T 3kgl_A 328 GSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVN 361 (466)
T ss_dssp EEEETTEEEEEEEESSCCEEEEEEESEEEEEEEC
T ss_pred EEeecCcEeeeeECCCCCEEEEEEeceEEEEEEe
Confidence 3478999999999999999999999999998765
No 61
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=65.30 E-value=4.4 Score=35.08 Aligned_cols=34 Identities=26% Similarity=0.330 Sum_probs=28.2
Q ss_pred CceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 1 MGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 1 mgIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
|.+|.|++|+.||.|-|.+|.=..=||-|++.++
T Consensus 193 ~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~ 226 (278)
T 1sq4_A 193 VNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYR 226 (278)
T ss_dssp EEEEEECSSSEESCCCCCSEEEEEEEEECEEEEE
T ss_pred EEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEE
Confidence 4679999999999977767766778999999864
No 62
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=65.20 E-value=4.9 Score=34.09 Aligned_cols=31 Identities=26% Similarity=0.049 Sum_probs=26.6
Q ss_pred ecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 5 CLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 5 ~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
+.|.|..+|+|-|+++.-+.-||-|++.+.-
T Consensus 224 ~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i 254 (337)
T 1y3t_A 224 EGPKGDRIVDHYHEYHTETFYCLEGQMTMWT 254 (337)
T ss_dssp EECSCCCCCCEECSSCEEEEEEEESCEEEEE
T ss_pred EcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE
Confidence 4588999999999988888899999998753
No 63
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=64.49 E-value=3 Score=39.99 Aligned_cols=34 Identities=12% Similarity=0.021 Sum_probs=30.9
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
.-|.+|+.+|+|.||.-+-+.=|+.|+++|.-++
T Consensus 328 v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~ 361 (465)
T 3qac_A 328 GVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVN 361 (465)
T ss_dssp EEECTTCEEEEEEESSCCEEEEEEEEEEEEEEEC
T ss_pred EEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEe
Confidence 3489999999999999999999999999997764
No 64
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=64.11 E-value=2.4 Score=39.32 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=30.2
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
+.+.|++|+.+|+| |+...-+.=||.|++.+.-
T Consensus 52 ~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~ 84 (416)
T 1uij_A 52 VQFQSKPNTILLPH-HADADFLLFVLSGRAILTL 84 (416)
T ss_dssp EEEEECTTEEEEEE-EESEEEEEEEEESCEEEEE
T ss_pred EEEEeccCcCcccc-cCCCceEEEEEeeEEEEEE
Confidence 46789999999999 9999999999999999875
No 65
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=63.78 E-value=3.2 Score=36.64 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=29.4
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..+.|++|+.+|+|.|+ ..-+.=||.|++.+.-.|
T Consensus 82 ~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~ 116 (385)
T 1j58_A 82 VNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVD 116 (385)
T ss_dssp EEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEEC
T ss_pred EEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEe
Confidence 35678999999999999 678888999999987643
No 66
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=62.47 E-value=6.4 Score=33.51 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=26.8
Q ss_pred ceeecCCCCcccC-CCCCCCeeeeeeeecceEEEE
Q 025711 2 GIFCLPPSGVIPL-HNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 2 gIF~Lp~g~~IPL-HDHPgMtvlsKvLyGsl~v~S 35 (249)
.++.+++|+.+|. |.|+... +.-||.|++.+.-
T Consensus 185 ~~~~l~pg~~~~~~H~H~~~E-~~yVl~G~~~~~i 218 (274)
T 1sef_A 185 HILSFEPGASHAYIETHVQEH-GAYLISGQGMYNL 218 (274)
T ss_dssp EEEEECTTCBCSSCBCCSCCE-EEEEEECEEEEEE
T ss_pred EEEEECCCCccCcceeccCeE-EEEEEeCEEEEEE
Confidence 3567899999999 9998665 4569999998764
No 67
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=60.51 E-value=50 Score=27.45 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=28.5
Q ss_pred ecCCCCcccCCCCCCCeeeeeeeecceEEEEeec
Q 025711 5 CLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDW 38 (249)
Q Consensus 5 ~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd~ 38 (249)
..++|.+=-||-|-.+.=+.+|+.|++.+..+|.
T Consensus 59 ~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~ 92 (174)
T 3ejk_A 59 EVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDG 92 (174)
T ss_dssp EECBTCEEEEEEESSCCEEEEEEESEEEEEEECC
T ss_pred ECCCCCEECcEecCCCceEEEEEeeEEEEEEEeC
Confidence 3567888889999888889999999998888774
No 68
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=58.77 E-value=5.6 Score=34.53 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=29.0
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEe
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSY 36 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SY 36 (249)
...|++|+.+++|.|+...=+.-||.|++.+.-.
T Consensus 56 ~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~ 89 (361)
T 2vqa_A 56 YMSLEPGAIRELHWHANAAEWAYVMEGRTRITLT 89 (361)
T ss_dssp EEEECTTCEEEEEECTTCCEEEEEEESEEEEEEE
T ss_pred EEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEE
Confidence 4568999999999999777888899999988764
No 69
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=58.05 E-value=4.6 Score=34.52 Aligned_cols=29 Identities=24% Similarity=0.295 Sum_probs=23.4
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMH 32 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~ 32 (249)
+.-+++|+.+|.|.|||.- ..=||-|++.
T Consensus 47 lvr~~pG~~~p~H~H~g~E-e~~VL~G~f~ 75 (223)
T 3o14_A 47 IVRYAPGSRFSAHTHDGGE-EFIVLDGVFQ 75 (223)
T ss_dssp EEEECTTEECCCEECTTCE-EEEEEEEEEE
T ss_pred EEEECCCCCcccccCCCCE-EEEEEEeEEE
Confidence 4558999999999999864 4567888875
No 70
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=58.01 E-value=8.9 Score=32.27 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=26.7
Q ss_pred CceeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 1 MGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 1 mgIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
|.+|.|+||+.||.|-|.+|.=+.=||-|++.++
T Consensus 167 ~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~ 200 (246)
T 1sfn_A 167 VSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYK 200 (246)
T ss_dssp EEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEE
T ss_pred EEEEEECCCCccCcccCCCceEEEEEEECEEEEE
Confidence 3578899999999854445656778899999865
No 71
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=57.77 E-value=4.3 Score=38.20 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=30.4
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEe
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSY 36 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SY 36 (249)
..+.|+||+.+|+| ||+-.-+.=||.|++.+.-.
T Consensus 89 ~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v 122 (445)
T 2cav_A 89 LEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLV 122 (445)
T ss_dssp EEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEE
T ss_pred EEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEE
Confidence 45789999999999 99999999999999988743
No 72
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=57.34 E-value=4.7 Score=38.23 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=31.0
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
.-|.+|+.+++|.||.-+-+.=||.|++.|.-.+
T Consensus 327 v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~ 360 (459)
T 2e9q_A 327 GVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVD 360 (459)
T ss_dssp EEECTTCEEEEEEESSCCEEEEEEEEEEEEEEEC
T ss_pred EEeeCCcCccceECCCCCEEEEEEeeEEEEEEEe
Confidence 3589999999999999999999999999998765
No 73
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=57.30 E-value=2.6 Score=34.80 Aligned_cols=36 Identities=25% Similarity=0.294 Sum_probs=28.7
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEEEEeec
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYDW 38 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd~ 38 (249)
.++-+++|+.+|.|-|||-- ..=||-|+.+....|+
T Consensus 49 ~lvr~~pG~~~p~H~H~g~e-e~~VL~G~~~~~~Gd~ 84 (153)
T 3bal_A 49 AIFNCPAGSSFASHIHAGPG-EYFLTKGKMEVRGGEQ 84 (153)
T ss_dssp EEEEECTTEEECCEEESSCE-EEEEEESEEEETTCGG
T ss_pred EEEEeCCCCCccCccCCCCE-EEEEEEEEEEecCccc
Confidence 46779999999999999754 4678999998766443
No 74
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=57.04 E-value=82 Score=26.71 Aligned_cols=34 Identities=15% Similarity=-0.073 Sum_probs=30.0
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEe
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSY 36 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SY 36 (249)
++.+++|...-+|-|....=...|+.|+..|+=+
T Consensus 276 ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~ 309 (369)
T 3st7_A 276 VNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFR 309 (369)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEEEESEEEEEEE
T ss_pred EEEecCCceeccccccCcceEEEEEeeeEEEEEE
Confidence 4668899999999999999999999999887765
No 75
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=56.80 E-value=9.5 Score=27.71 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=26.3
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
...+++|..+|.|.|+ ..-+.-|+.|++.+..
T Consensus 38 ~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i 69 (128)
T 4i4a_A 38 WCIVRPETKSFRHSHN-EYELFIVIQGNAIIRI 69 (128)
T ss_dssp EEEECTTEECCCBCCS-SEEEEEEEESEEEEEE
T ss_pred EEEECCCCccCCEecC-CeEEEEEEeCEEEEEE
Confidence 3458899999999996 5668889999998754
No 76
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=56.28 E-value=36 Score=26.66 Aligned_cols=26 Identities=27% Similarity=0.429 Sum_probs=21.1
Q ss_pred eEeecCCCCCeeEeeecC--ceeEeEeeCCC
Q 025711 159 SILYPADGGNMHCFTAVT--ACAVLDVLGPP 187 (249)
Q Consensus 159 ~vL~P~~ggNlH~ftAv~--pcAfLDIL~PP 187 (249)
+++.|. +-.|.+.+.+ +| +|-|++||
T Consensus 153 ~i~i~~--~~~H~~~n~~~~~~-~l~v~~~~ 180 (192)
T 1y9q_A 153 HIRFFS--DQPHGYAAVTEKAV-FQNIVAYP 180 (192)
T ss_dssp EEEEEC--SSSEEEEESSSCEE-EEEEEECC
T ss_pred EEEEcC--CCCeEeECCCCCcE-EEEEEecC
Confidence 466674 7789999984 78 99999998
No 77
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=56.08 E-value=3.4 Score=30.73 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=25.6
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
.+.+++|..+|.|-|++. -+.-||.|++.+.
T Consensus 52 ~~~~~pg~~~~~H~H~~~-e~~~Vl~G~~~~~ 82 (126)
T 1vj2_A 52 LFTVEPGGLIDRHSHPWE-HEIFVLKGKLTVL 82 (126)
T ss_dssp EEEEEEEEEEEEECCSSC-EEEEEEESEEEEE
T ss_pred EEEECCCCcCCceeCCCc-EEEEEEEeEEEEE
Confidence 456899999999999965 4567999999875
No 78
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=54.06 E-value=5.2 Score=28.52 Aligned_cols=30 Identities=13% Similarity=-0.032 Sum_probs=22.4
Q ss_pred ecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 5 CLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 5 ~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
.+++|. .|.|-|++..-+.-||.|++.+..
T Consensus 34 ~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~ 63 (107)
T 2i45_A 34 VKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF 63 (107)
T ss_dssp EEEEEE-CCCBCC--CCEEEEESSSCEEEEE
T ss_pred EECCCC-CcceeCCCCCEEEEEEeCEEEEEE
Confidence 355676 579999998888899999998753
No 79
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=52.72 E-value=7 Score=36.46 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=25.8
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHI 33 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v 33 (249)
+++.|++|..+|.|-|+.-. +--||-|+..+
T Consensus 297 ~~~~l~PG~~~~~HrH~~~~-v~~VleG~G~~ 327 (394)
T 3bu7_A 297 SMQMLRPGEHTKAHRHTGNV-IYNVAKGQGYS 327 (394)
T ss_dssp EEEEECTTCBCCCEEESSCE-EEEEEECCEEE
T ss_pred EEEEECCCCcCCCcccCCcE-EEEEEeCeEEE
Confidence 57789999999999999876 45599998743
No 80
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=52.42 E-value=5.4 Score=34.44 Aligned_cols=32 Identities=19% Similarity=0.098 Sum_probs=28.3
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
..+|+|...|.|.|+...=+.=||-|++.+..
T Consensus 48 ~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v 79 (239)
T 2xlg_A 48 AQIPPGGGPMPHIHYFINEWFWTPEGGIELFH 79 (239)
T ss_dssp EEECTTCSCCSEEESSEEEEEEETTCCCEEEE
T ss_pred EEECCCCcCCCeECCCccEEEEEEEeEEEEEE
Confidence 36899999999999998888899999999854
No 81
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=50.52 E-value=7.2 Score=36.48 Aligned_cols=35 Identities=11% Similarity=0.058 Sum_probs=31.7
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..-|.+|+.+++|.||.-+-+.=|+.|++.+.-.+
T Consensus 270 ~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~ 304 (434)
T 2ea7_A 270 SVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVG 304 (434)
T ss_dssp EEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEE
T ss_pred EEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEe
Confidence 34589999999999999999999999999998775
No 82
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=49.89 E-value=7.5 Score=36.56 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=31.2
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
--|.+|+.+|+|.||.-+-+.=|+-|++++.-.+
T Consensus 286 v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~ 319 (445)
T 2cav_A 286 LQMNEGALFVPHYNSRATVILVANEGRAEVELVG 319 (445)
T ss_dssp EEECTTEEEEEEEESSCEEEEEEEESCEEEEEEE
T ss_pred EEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEe
Confidence 3488999999999999999999999999998775
No 83
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=45.63 E-value=9.5 Score=35.50 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=31.3
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
.-|.+|+..++|.||.-+-+.=||.|+.++.-.+
T Consensus 244 v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~ 277 (397)
T 2phl_A 244 IEMEEGALFVPHYYSKAIVILVVNEGEAHVELVG 277 (397)
T ss_dssp EEECTTEEEEEEEESSCEEEEEEEESEEEEEEEE
T ss_pred EEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEe
Confidence 3589999999999999999999999999998776
No 84
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=45.04 E-value=9.9 Score=35.25 Aligned_cols=35 Identities=11% Similarity=0.052 Sum_probs=31.6
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..-|.+|+.+++|.||.-+-+.=|+.|+..+.-.+
T Consensus 253 ~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~ 287 (416)
T 1uij_A 253 SVDINEGALLLPHFNSKAIVILVINEGDANIELVG 287 (416)
T ss_dssp EEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEE
T ss_pred EEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEc
Confidence 34689999999999999999999999999988765
No 85
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=44.82 E-value=17 Score=24.88 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=21.6
Q ss_pred CcccCCCCCCCeeeeeeeecceEEE
Q 025711 10 GVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 10 ~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
..+|.|.|++..-+.=||.|++.+.
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~ 64 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIA 64 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEE
Confidence 4589999999778899999999875
No 86
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=41.38 E-value=1.1e+02 Score=27.43 Aligned_cols=35 Identities=17% Similarity=0.141 Sum_probs=26.3
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeec-ceEEEEee
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFG-TMHIKSYD 37 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyG-sl~v~SYd 37 (249)
+.++.+|.+-|.|-|+.=.==.....| .|.|.=|.
T Consensus 110 ~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~ 145 (246)
T 3kmh_A 110 IMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWN 145 (246)
T ss_dssp EEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEE
T ss_pred EeeccCCCCCCcccCCCccccEEecCCCeEEEEEEe
Confidence 567899999999999975444445566 77777775
No 87
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=39.66 E-value=25 Score=31.11 Aligned_cols=33 Identities=15% Similarity=0.065 Sum_probs=25.6
Q ss_pred CceeecCCCCcccC-CCCCCCeeeeeeeecceEEE
Q 025711 1 MGIFCLPPSGVIPL-HNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 1 mgIF~Lp~g~~IPL-HDHPgMtvlsKvLyGsl~v~ 34 (249)
|-||-|.||+.||. |-|+ |.=-.-||.|+..++
T Consensus 188 ~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~ 221 (266)
T 4e2q_A 188 IHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYR 221 (266)
T ss_dssp EEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEE
T ss_pred EEEEEECCCcCcCCceEcc-cceEEEEEeceEEEE
Confidence 45899999999998 6665 544456899998865
No 88
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=33.73 E-value=19 Score=31.48 Aligned_cols=31 Identities=16% Similarity=0.316 Sum_probs=27.4
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
|.+.+|.-+|.|=|.||-.++=||-|.+.-+
T Consensus 69 ~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~ 99 (256)
T 2vec_A 69 EVLAPGAAFQPRTYPKVDILNVILDGEAEYR 99 (256)
T ss_dssp EEECTTCEEEEECCSSEEEEEEEEESEEEEE
T ss_pred cccCCCCccCCcCCCCcEEEEEEEeeEEEEE
Confidence 4578889999999999999999999998744
No 89
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=33.67 E-value=25 Score=26.53 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=27.5
Q ss_pred CceeecCCCCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 1 MGIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 1 mgIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
++++.+++|+.++.|. ...=+.-||-|++.+.-
T Consensus 42 ~~~~~~~pG~~~~~H~--~~~E~~~Vl~G~~~~~~ 74 (119)
T 3lwc_A 42 IGYGRYAPGQSLTETM--AVDDVMIVLEGRLSVST 74 (119)
T ss_dssp EEEEEECTTCEEEEEC--SSEEEEEEEEEEEEEEE
T ss_pred EEEEEECCCCCcCccC--CCCEEEEEEeCEEEEEE
Confidence 3678899999988874 78889999999999854
No 90
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=32.20 E-value=55 Score=21.92 Aligned_cols=29 Identities=24% Similarity=0.332 Sum_probs=23.3
Q ss_pred CeeEeecCCCCCeeEeeecC--ceeEeEeeCCC
Q 025711 157 NTSILYPADGGNMHCFTAVT--ACAVLDVLGPP 187 (249)
Q Consensus 157 ~t~vL~P~~ggNlH~ftAv~--pcAfLDIL~PP 187 (249)
+.+++.|. |-.|.+.+.+ ++-+|-|.+||
T Consensus 74 Gd~~~ip~--~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 74 GMAAFAPA--GAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp TCEEEECT--TSCEEEECCSSSCEEEEEEEESC
T ss_pred CCEEEECC--CCcEEeEeCCCCCEEEEEEeCCC
Confidence 44566775 8899999874 79999999997
No 91
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=31.11 E-value=50 Score=23.74 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=23.8
Q ss_pred CeeEeecCCCCCeeEeeecC--ceeEeEeeCCCC
Q 025711 157 NTSILYPADGGNMHCFTAVT--ACAVLDVLGPPY 188 (249)
Q Consensus 157 ~t~vL~P~~ggNlH~ftAv~--pcAfLDIL~PPY 188 (249)
+-+++.|. +-.|.+.+.+ ++-+|.|++||-
T Consensus 86 Gd~~~i~~--~~~H~~~n~~~~~~~~l~v~~p~~ 117 (125)
T 3h8u_A 86 GDIAIAKP--GQVHGAMNSGPEPFIFVSVVAPGN 117 (125)
T ss_dssp TEEEEECT--TCCCEEEECSSSCEEEEEEEESTT
T ss_pred CCEEEECC--CCEEEeEeCCCCCEEEEEEECCCc
Confidence 33566674 8899999974 899999999983
No 92
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=29.96 E-value=40 Score=29.97 Aligned_cols=33 Identities=15% Similarity=0.022 Sum_probs=26.0
Q ss_pred ecCCCCccc--CCCCCCCeeeeeeeecceEEEEee
Q 025711 5 CLPPSGVIP--LHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 5 ~Lp~g~~IP--LHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
..|.|..+| +|.|+...=+.-||.|++.+.-=+
T Consensus 54 ~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~ 88 (350)
T 1juh_A 54 NAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQS 88 (350)
T ss_dssp EECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEE
T ss_pred EcCCCCCCCCccccCCCceEEEEEEEEEEEEEECC
Confidence 467788888 999997667777999999876443
No 93
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=29.84 E-value=39 Score=27.41 Aligned_cols=30 Identities=23% Similarity=0.552 Sum_probs=25.5
Q ss_pred CCCcccCC---C-CCCCeeeeeeeecceEEEEee
Q 025711 8 PSGVIPLH---N-HPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 8 ~g~~IPLH---D-HPgMtvlsKvLyGsl~v~SYd 37 (249)
|++..+-| + |+|--+.+.||.|+|++.-|+
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~ 56 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYA 56 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEES
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEEC
Confidence 34556779 7 999999999999999997775
No 94
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=28.42 E-value=25 Score=29.03 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=27.6
Q ss_pred ceeecCC-CCcccCCCCCCCeeeeeeeecceEEEE
Q 025711 2 GIFCLPP-SGVIPLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 2 gIF~Lp~-g~~IPLHDHPgMtvlsKvLyGsl~v~S 35 (249)
++.-||+ |+.-+.|.|..+.-+.-||.|.+.++-
T Consensus 91 ~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl 125 (166)
T 2vpv_A 91 GILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV 125 (166)
T ss_dssp EEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE
T ss_pred EEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE
Confidence 4667999 887777777788999999999999853
No 95
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=28.31 E-value=1.7e+02 Score=24.36 Aligned_cols=46 Identities=22% Similarity=0.275 Sum_probs=31.4
Q ss_pred eecCCCCeeEeecCCCCCeeEeeecCceeE-eEeeCCCCCCCCCCCCcc
Q 025711 151 DLTAPCNTSILYPADGGNMHCFTAVTACAV-LDVLGPPYSDSEGRHCTY 198 (249)
Q Consensus 151 ~~ta~c~t~vL~P~~ggNlH~ftAv~pcAf-LDIL~PPY~~~~gR~CtY 198 (249)
.|+++....++-|. |=-|.|.+++.-|+ +=..+=+|+..+.+...|
T Consensus 104 ~Ls~~n~~~L~IP~--G~aHgf~~lsd~a~~~y~~s~~Y~p~~e~~i~~ 150 (184)
T 2ixk_A 104 RLSAENKRQMWIPA--GFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVW 150 (184)
T ss_dssp EEETTTCCEEEECT--TEEEEEEECSSEEEEEEEESSCCCGGGEEEBCT
T ss_pred EeCCCcCCEEEeCC--CeEEEEEEcCCCEEEEEeCCCccChhhccCcCC
Confidence 45566566677785 99999999986454 555577888765443333
No 96
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=26.36 E-value=26 Score=30.21 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=27.1
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
+.+.+|.-+|.|=|.||-.++=||-|.+.=+
T Consensus 46 d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~ 76 (242)
T 1tq5_A 46 DVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ 76 (242)
T ss_dssp EEECTTCEEEEEEECSCEEEEEEEESEEEEE
T ss_pred ceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE
Confidence 4577888999999999999999999998643
No 97
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=26.02 E-value=31 Score=32.26 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=30.8
Q ss_pred eecCCCCcccCCCCCCCeeeeeeeecceEEEEee
Q 025711 4 FCLPPSGVIPLHNHPGMTVFSKLLFGTMHIKSYD 37 (249)
Q Consensus 4 F~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~SYd 37 (249)
.-|.+|+.++.|.||.-+-+.=|+-|+..+.-.+
T Consensus 268 ~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~ 301 (418)
T 3s7i_A 268 VEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVA 301 (418)
T ss_dssp EEECTTEEEEEEEESSCEEEEEEEECCEEEEEEE
T ss_pred EEecCCceeCceecCCCCEEEEEEeCeEEEEEEe
Confidence 4578999999999999999999999999987765
No 98
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=25.09 E-value=2.1e+02 Score=23.81 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=30.7
Q ss_pred eecCCCCeeEeecCCCCCeeEeeecCcee-EeEeeCCCCCCCCCCCCc
Q 025711 151 DLTAPCNTSILYPADGGNMHCFTAVTACA-VLDVLGPPYSDSEGRHCT 197 (249)
Q Consensus 151 ~~ta~c~t~vL~P~~ggNlH~ftAv~pcA-fLDIL~PPY~~~~gR~Ct 197 (249)
.|+++....++-|. |=-|.|.+++.-| ++=..+=+|+....+...
T Consensus 103 ~Ls~~n~~~L~IP~--G~aHgf~~lsd~a~~~y~~s~~Y~p~~e~~i~ 148 (185)
T 1ep0_A 103 RLSDENRREFFIPE--GFAHGFLALSDECIVNYKCTELYHPEYDSGIP 148 (185)
T ss_dssp EEETTTCCEEEECT--TEEEEEEECSSEEEEEEEESSCCCGGGEEECC
T ss_pred EecCCCCCEEEeCC--CeEEEEEEcCCCeEEEEecCCccChhhccCcC
Confidence 45566566677785 9999999998645 455557788876544333
No 99
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=24.62 E-value=26 Score=30.24 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=26.1
Q ss_pred eeecCCCCcc--cCCCCCCCeeeeeeeecceEEEE
Q 025711 3 IFCLPPSGVI--PLHNHPGMTVFSKLLFGTMHIKS 35 (249)
Q Consensus 3 IF~Lp~g~~I--PLHDHPgMtvlsKvLyGsl~v~S 35 (249)
++.|++|+.. |.|.|++ .-+.-||.|++.+.-
T Consensus 72 ~~~l~PG~~~~~~~h~H~~-eE~~~Vl~G~l~v~v 105 (278)
T 1sq4_A 72 IVELAPNGGSDKPEQDPNA-EAVLFVVEGELSLTL 105 (278)
T ss_dssp EEEEEEEEEESSCCCCTTE-EEEEEEEESCEEEEE
T ss_pred EEEECCCCccCCCCcCCCc-eEEEEEEeCEEEEEE
Confidence 5668899888 8899985 667789999999864
No 100
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=22.86 E-value=32 Score=32.01 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=26.1
Q ss_pred ceeecCCCCcccCCCCCCCeeeeeeeecceEE
Q 025711 2 GIFCLPPSGVIPLHNHPGMTVFSKLLFGTMHI 33 (249)
Q Consensus 2 gIF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v 33 (249)
+++.|++|.++|.|-|..- -+-=||-|+...
T Consensus 126 ~~~~l~PG~~~~~HrH~~~-ev~~IleG~G~~ 156 (394)
T 3bu7_A 126 GIQTMKAGERAGAHRHAAS-ALRFIMEGSGAY 156 (394)
T ss_dssp EEEEECTTCBCCCEEESSC-EEEEEEECSCEE
T ss_pred EEEEECCCCCcCCccCCcc-eEEEEEEeeEEE
Confidence 6789999999999999886 477788898644
No 101
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=21.73 E-value=53 Score=29.42 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=25.6
Q ss_pred eeecCCCCcccCCCCCCCeeeeeeeecceEEE
Q 025711 3 IFCLPPSGVIPLHNHPGMTVFSKLLFGTMHIK 34 (249)
Q Consensus 3 IF~Lp~g~~IPLHDHPgMtvlsKvLyGsl~v~ 34 (249)
+-.|++|+..++|-|+.-. +.=|+-|+.+++
T Consensus 272 ~~~l~pG~~~~~H~h~~~e-v~~v~~G~g~~~ 302 (354)
T 2d40_A 272 LQLLPKGFASRVARTTDST-IYHVVEGSGQVI 302 (354)
T ss_dssp EEEECTTCBCCCBEESSCE-EEEEEEEEEEEE
T ss_pred EEEECCCCCCCceecCCcE-EEEEEeCeEEEE
Confidence 4569999999999999985 457888988765
Done!