BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025712
(249 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 229 bits (585), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 153/215 (71%), Gaps = 1/215 (0%)
Query: 13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM 72
+ N++A L L+++ +P +V +++ +GICGSDVH+++ R A+FIVK PM
Sbjct: 3 SDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPM 62
Query: 73 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 132
VIGHE +G + +VG VK L+ GDRVA+EPG+ C C CK G YNLCP++ F +PP +
Sbjct: 63 VIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDD 122
Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 192
G+LA VH A C+KLPDNVSLEEGA+ EPLSVGVHACRRA V T V+++G+GPIGL
Sbjct: 123 GNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGL 182
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 227
V++LAA+A+GA ++ T +RL +A+N GAD T
Sbjct: 183 VSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVT 216
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 227 bits (578), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 153/222 (68%)
Query: 12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
K N++ + G L+++ Y +P GP +V +R+ ++GICGSDVH+++ R NFIVKKP
Sbjct: 5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64
Query: 72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
MV+GHE +G +E+VGS VK L+ GDRVA+EPG + CK G YNL P + F +PP
Sbjct: 65 MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124
Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
+G+L H A CYKLPDNV+ EEGA+ EPLSVG+HACRR V V++ G+GPIG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 184
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 233
+VTLL A+A GA ++++TD+ RLS A+ +GAD ++S +
Sbjct: 185 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKE 226
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 150/222 (67%)
Query: 12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
K N++ + G L+++ Y +P GP +V +R ++GICGSDVH+++ R NFIVKKP
Sbjct: 5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKP 64
Query: 72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
V+GHE +G +E+VGS VK L+ GDRVA+EPG + CK G YNL P + F +PP
Sbjct: 65 XVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPD 124
Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
+G+L H A CYKLPDNV+ EEGA+ EPLSVG+HACRR V V++ G+GPIG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 184
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 233
VTLL A+A GA ++++TD+ RLS A+ +GAD ++S +
Sbjct: 185 XVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKE 226
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 219 bits (559), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 152/220 (69%)
Query: 14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMV 73
+N++ + G L+++ Y +P GP +V +++ ++GICGSDVH+++ R +F+VKKPMV
Sbjct: 6 ENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMV 65
Query: 74 IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 133
+GHE +G + +VGS V+ L+ GDRVA++PG CK G YNL P + F +PP +G
Sbjct: 66 LGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDG 125
Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
+L H A CYKLPDNV+ EEGA+ EPLSVG+HACRRA V V++ G+GPIGLV
Sbjct: 126 NLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLV 185
Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 233
LLAA+A GA ++++TD+ RLS A+ +GAD ++S +
Sbjct: 186 NLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNE 225
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 119/202 (58%), Gaps = 13/202 (6%)
Query: 40 DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA 99
+V V +++ GICGSDVH +K IV+ V+GHE AG + V VKS++VGDRVA
Sbjct: 42 EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA 101
Query: 100 LEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA 159
+EP + C C C G YN C + F +PP G L V HPA C+K+ N+S E GA
Sbjct: 102 IEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGA 160
Query: 160 MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 219
M EPLSV + +RA V V+I G+GPIGL+T+L A+A GA ++ITD+D RL A
Sbjct: 161 MLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA 220
Query: 220 RN------------LGADETAK 229
+ L A+E+AK
Sbjct: 221 KEICPEVVTHKVERLSAEESAK 242
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 107/188 (56%), Gaps = 1/188 (0%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
+P GP ++ VR++A ICG+D+H +K A ++ P+V GHE +G++E VG V+
Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
+VGD V+LE I C C C+ G+Y++C + G +G A VV PA+ + P +
Sbjct: 80 QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
+ E A+ EP VH + +V+I G+GPIGL+ + RA GA I+++D +
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPN 198
Query: 213 VQRLSIAR 220
RL+ AR
Sbjct: 199 PYRLAFAR 206
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
+P GP +V +++ A ICG+D+H ++ A +K P ++GHE AG + EVG V+ L
Sbjct: 24 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDL 83
Query: 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
+VGD +++E I CG C CK Y++C + FG +G AH + PAK +K P +
Sbjct: 84 QVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAWKNPKD 142
Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
+ E A+ EPL V + + +I G+GP+GL+ + A+A GA +I+++
Sbjct: 143 MPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVIVSEPS 201
Query: 213 VQRLSIARNLGAD 225
R +A+ +GAD
Sbjct: 202 EFRRKLAKKVGAD 214
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 5/220 (2%)
Query: 12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
++ A L + + ++ +P GP D+ V+++A GICG+D H F P
Sbjct: 21 QSXXKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPP 76
Query: 72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
+ +GHE GI+ E GS V+ + G R+ +P ISCG C C+AG NLC +R G
Sbjct: 77 VTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI-HR 135
Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
+G A V+ P K +++P + GA CEPL+ +H + + + V I+G G IG
Sbjct: 136 DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIG 195
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
L+T+ AR GA +I++ + +A +GA T S
Sbjct: 196 LLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPS 235
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 2/193 (1%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
+P GP +V +++ A ICG+D+H ++ A +K P + GHE AG + E+G V+ +
Sbjct: 23 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGI 82
Query: 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
EVGD V++E I CG C C+ G Y++C + FG T+G A V PA+ +K P +
Sbjct: 83 EVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKS 141
Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
+ E + EPL V + ++ V+I G+GP+GL+ + A+A GA +I+++
Sbjct: 142 IPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEPS 200
Query: 213 VQRLSIARNLGAD 225
R +A+ +GAD
Sbjct: 201 DFRRELAKKVGAD 213
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 2/193 (1%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
+P GP +V +++ A ICG+D+H ++ A +K P + GHE AG + E+G V+ +
Sbjct: 24 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGI 83
Query: 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
EVGD V++E I CG C C+ G Y++C + FG T+G A V PA+ +K P +
Sbjct: 84 EVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKS 142
Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
+ E + EPL V + ++ V+I G+GP+GL+ + A+A GA +I+++
Sbjct: 143 IPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEPS 201
Query: 213 VQRLSIARNLGAD 225
R +A+ +GAD
Sbjct: 202 DFRRELAKKVGAD 214
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
L I +PT +V+V++K GICGSD H + R N K P VIGHE G+I+ V
Sbjct: 32 LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIY---RGHNPFAKYPRVIGHEFFGVIDAV 88
Query: 86 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 145
G V+S VG+RVA++P +SCGHC C G N+C + G +G + V PAK
Sbjct: 89 GEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGV-HADGGFSEYAVVPAKN 147
Query: 146 CYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA-FGAP 204
+K+P+ V+ + M EP ++ + V++ G+GPIGL + + +
Sbjct: 148 AWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVK 207
Query: 205 RIIITDVDVQRLSIARNLGAD 225
+I+ D +RL A+ GAD
Sbjct: 208 NVIVADRIDERLEKAKESGAD 228
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 112/201 (55%), Gaps = 8/201 (3%)
Query: 33 LPTLGPQD-VKVRIKALGICGSDVHH-FKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90
+P + QD V+V+I + G+CGSD+ FK N P+ +GHE +G I+ VGS V
Sbjct: 19 IPEIKHQDEVRVKIASSGLCGSDLPRIFK-----NGAHYYPITLGHEFSGYIDAVGSGVD 73
Query: 91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
L GD VA P + C C C G Y+ C + F GS +G A +V K + LP
Sbjct: 74 DLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR-RDGGFAEYIVVKRKNVFALP 132
Query: 151 DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 210
++ +E+GA EP++VG+HA A NV+I+G+G IGL+ + A A GA + D
Sbjct: 133 TDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAID 192
Query: 211 VDVQRLSIARNLGADETAKVS 231
+ ++L++A++ GA +T S
Sbjct: 193 ISSEKLALAKSFGAMQTFNSS 213
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 107/206 (51%), Gaps = 14/206 (6%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIE 83
LKI+ PT+ +V VRIKA G+C +D+H ++ VK P++ GHE GI+E
Sbjct: 13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 84 EVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
EVG V L+VGDRV + P + +CGHC C +G LC + G +G A
Sbjct: 69 EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRA 126
Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
A K+PDN+S EE A C ++ A + P V I G G +G V + A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 200 AFGAPRIIITDVDVQRLSIARNLGAD 225
A G ++ D+ ++L +A+ LGAD
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGAD 210
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 106/206 (51%), Gaps = 14/206 (6%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIE 83
LKI+ PT+ +V VRIKA G+C +D+H ++ VK P++ GHE GI+E
Sbjct: 13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 84 EVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
EVG V L+VGDRV + P + +CGHC C +G LC + G +G A
Sbjct: 69 EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRA 126
Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
A K+PDN+S EE A C ++ A + P V I G G G V + A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 200 AFGAPRIIITDVDVQRLSIARNLGAD 225
A G ++ D+ ++L +A+ LGAD
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGAD 210
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 38 PQDVKVRIKALGICGSDVHHFKTMRCANFIVKK----PMVIGHECAGIIEEVGSEV---- 89
P ++ +++KA GICGSDVH +T + P+ +GHE +G++ E G E
Sbjct: 55 PTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRR 114
Query: 90 --KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 147
K E+G+ V E + CGHC C G N C + G +G+ A V AK +
Sbjct: 115 TNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAW 173
Query: 148 KLPDNVSLEEG-------AMCEPLSVGVHAC--RRANVGPETNVMIMGSGPIGLVTLLAA 198
L + + EG ++ EP SV +A R + P NV+I+G GPIGL +
Sbjct: 174 SLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAIL 233
Query: 199 RAFGAPRIIITDVDVQRLSIARNLGAD 225
+ GA ++I+++ R ++A+ LGAD
Sbjct: 234 KHAGASKVILSEPSEVRRNLAKELGAD 260
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 7/213 (3%)
Query: 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
G + L++ +P GP++V+VR+KA + DV K + + P V+G + +G+
Sbjct: 11 GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPL--PHVLGADGSGV 68
Query: 82 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
++ VG V+ GD V + PG+SCG C C AG NLCP + G +G+ A VV
Sbjct: 69 VDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVL 127
Query: 142 PAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGP-IGLVTLLAA 198
P P N+S EE A L+ + V P +V++M +G + + + A
Sbjct: 128 PEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIA 187
Query: 199 RAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
+ FGA R+I T +L A+ LGADET +
Sbjct: 188 KLFGA-RVIATAGSEDKLRRAKALGADETVNYT 219
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 108/216 (50%), Gaps = 8/216 (3%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKTMRCA-NFIVKKPMVIGHEC 78
K LK++ +P V ++I+A G+C SDVH F +R + VK P+ +GHE
Sbjct: 11 KPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI 70
Query: 79 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 138
AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 71 AGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEY 129
Query: 139 VVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLL 196
V+ P K YKL ++E + A R+A++ P ++++G+ G +G + +
Sbjct: 130 VLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQ 189
Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 232
A+A II DV + L A+ GAD S+
Sbjct: 190 IAKAVSGATIIGVDVREEALEAAKRAGADYVINASS 225
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 8/217 (3%)
Query: 24 KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGII 82
K L+I+ P L G DV VRI G+C +D+H + M K P +GHE G I
Sbjct: 26 KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYI 85
Query: 83 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP 142
EEV V+ LE GD V L P ++ G C C+AG C + F G +G A +
Sbjct: 86 EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTS 144
Query: 143 AKLCYKLPDNVSLEEGAMCEPLS-VGVHACRRA-----NVGPETNVMIMGSGPIGLVTLL 196
+ KLP ++S E+ PL+ G+ A R + P V I+G G +G + +
Sbjct: 145 HRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQ 204
Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 233
+ +I DV ++L +A LGAD D
Sbjct: 205 LLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD 241
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGI 81
K L I +P GP ++V I+A G+C +D+H + ++ VK P + GHE G
Sbjct: 36 KPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGF 91
Query: 82 IEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 139
+ VGS VK ++ GDRV + P + +CGHC C G LC E G NG A V
Sbjct: 92 VSAVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEEQLNTGY-SVNGGFAEYV 149
Query: 140 VHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
V LP N+ E A +C ++V + + P V+I G G +G + +
Sbjct: 150 VADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGHMAVQY 208
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 232
ARA G + D+D ++L +AR LGA T T
Sbjct: 209 ARAMGL-NVAAVDIDDRKLDLARRLGATVTVNAKT 242
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 8/203 (3%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
PT GP ++ +++ A G+C SD+ M A + P+ +GHE G + E+G V
Sbjct: 21 PTPGPGEILLKVTAAGLCHSDIF-VMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFG 79
Query: 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG-SPP---TNGSLA-HKVVHPAKLCYK 148
VGD VA+ CG C C G N C G +PP + GS+A + +V A+
Sbjct: 80 VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVP 139
Query: 149 LPDNVSLEEGAMCEPLSVGVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRI 206
+ D + + + HA R +GP + +++G G +G V + RA A R+
Sbjct: 140 IGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARV 199
Query: 207 IITDVDVQRLSIARNLGADETAK 229
I D+D RL++AR +GAD K
Sbjct: 200 IAVDLDDDRLALAREVGADAAVK 222
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 7/198 (3%)
Query: 32 HLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91
L + P + + ++ G+C +D+H + +F K V+GHE GI++E+G++V S
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDFGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 92 LEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
L+VGDRV++ CGHC C +G+ C E++ G +G +A + + A K+P
Sbjct: 76 LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVP 134
Query: 151 DNVSLEEGAMCEPLSVGVH-ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
D + E + V + A + + V P +I G+G +G + + A+ ++I
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 210 DVDVQRLSIARNLGADET 227
D++ +L++A+ +GAD T
Sbjct: 195 DINQDKLNLAKKIGADVT 212
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 104/196 (53%), Gaps = 7/196 (3%)
Query: 32 HLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91
L + P + + ++ G+C +D+H + ++ K V+GHE GI++E+G++V S
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDYGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 92 LEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
L+VGDRV++ CGHC C +G+ C E++ G +G +A + + A K+P
Sbjct: 76 LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVP 134
Query: 151 DNVSLEEGAMCEPLSVGVH-ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
D + E + V + A + + V P +I G+G +G + + A+ ++I
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 210 DVDVQRLSIARNLGAD 225
D++ +L++A+ +GAD
Sbjct: 195 DINQDKLNLAKKIGAD 210
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 105/219 (47%), Gaps = 15/219 (6%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIE 83
L I +P GP V+V+I+A G+C +D+H ++ VK P + GHE G +
Sbjct: 15 LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70
Query: 84 EVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
VGS V ++ GDRV + P + +CG+C C G LC + + G NG VV
Sbjct: 71 AVGSGVSRVKEGDRVGV-PWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVA 128
Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
LPD V E A +C ++V + + P V+I G G +G V + AR
Sbjct: 129 DPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR 187
Query: 200 AFGAPRIIITDVDVQRLSIARNLGADETAKV-STDIEMW 237
A G R+ D+D +L++AR LGA+ TD W
Sbjct: 188 AMGL-RVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAW 225
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
+ L + + + + + V I + G+CGSDVH F R + V P+++GHE AG +
Sbjct: 28 QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMF---RGEDPRVPLPIILGHEGAGRVV 84
Query: 84 EVGSEVKSL-----EVGDRVALEPGISCGHCSLCKAGSY-NLCPEMRFFG-------SPP 130
EV E + L + GD + GI+CG C CK LCP + +G P
Sbjct: 85 EVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPH 144
Query: 131 TNGSLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPET----NVMIM 185
G + H V+ P K+ + L+ AM + G A + PE+ V+I
Sbjct: 145 LRGCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVIQ 202
Query: 186 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 227
G+GP+GL ++ AR+ GA +I+ RL +A +GAD T
Sbjct: 203 GAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT 244
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--VIGHECAGIIE 83
L+I+ +P GP V V+I+A G+C +D+H + ++ VK P+ + GHE G +
Sbjct: 19 LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVA 74
Query: 84 EVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
VGS V ++ GDRV + P + +CG C C G LC + G NG A V+
Sbjct: 75 AVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLA 132
Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
LP NV E A +C ++V ++ N P V I G G +G V + AR
Sbjct: 133 DPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYAR 191
Query: 200 AFGAPRIIITDVDVQRLSIARNLGADET 227
A G + D+D +L +AR LGA T
Sbjct: 192 AMGL-HVAAIDIDDAKLELARKLGASLT 218
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 100/212 (47%), Gaps = 35/212 (16%)
Query: 40 DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA 99
+V V++ A G+C +D+ +R + V P V+GHE +GIIE +G V L+VGD V
Sbjct: 33 EVLVKVVATGMCHTDL----IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 88
Query: 100 LEPGISCGHCSLCKAGSYNLCPEM--RFFGSPPTNGSLA-----------HKVVHPAKLC 146
L G CG C+ C G+ C E R F + G+ A H +
Sbjct: 89 LSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFAT 147
Query: 147 Y---------KLPDNVSLEEGAMCEPLSVGVH----ACRRA-NVGPETNVMIMGSGPIGL 192
Y K+ +V +E + PL G+ AC A V P ++ + G+G +GL
Sbjct: 148 YALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGL 204
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGA 224
LLAA+ GA II D+ RL +A+ LGA
Sbjct: 205 SALLAAKVCGASIIIAVDIVESRLELAKQLGA 236
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 10/216 (4%)
Query: 24 KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHE 77
K L +Q +P GPQ V ++++A G+C SDVH F +R + VK P+ +GHE
Sbjct: 11 KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 138 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 195
V+ P K YKL ++E + A R+A++ P +T +++ G +G + +
Sbjct: 129 YVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
A+A II DV + + A+ GAD S
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS 224
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 10/216 (4%)
Query: 24 KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHE 77
K L +Q +P GPQ V ++++A G+C SDVH F +R + VK P+ +GHE
Sbjct: 11 KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 138 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 195
V+ P K YKL ++E + A R+A++ P +T +++ G +G + +
Sbjct: 129 YVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
A+A II DV + + A+ GAD S
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS 224
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 10/216 (4%)
Query: 24 KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHE 77
K L +Q +P GPQ V ++++A G+C SDVH F +R + VK P+ +GHE
Sbjct: 11 KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 138 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 195
V+ P K YKL ++E + A R+A++ P +T +++ G +G + +
Sbjct: 129 YVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
A+A II DV + + A+ GAD S
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS 224
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 10/216 (4%)
Query: 24 KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHE 77
K L +Q +P GPQ V ++++A G+C SDVH F +R + VK P+ +GHE
Sbjct: 11 KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 138 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 195
V+ P K YKL ++E + A R+A++ P +T +++ G +G +
Sbjct: 129 YVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAV 188
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
A+A II DV + + A+ GAD S
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS 224
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 30/214 (14%)
Query: 38 PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
P+ +VRIK A+GICG+D H + N + P+++GHE AGI+E VG V +++ G
Sbjct: 31 PKAYEVRIKMVAVGICGTDDH----VVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPG 86
Query: 96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKVVHPAK 144
D+V CG C +CK N C + G+P G H + +
Sbjct: 87 DKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHFLGTST 145
Query: 145 LC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGSGPIGL 192
Y + D ++ + PL S G A A V P + + G G +GL
Sbjct: 146 FSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGL 205
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
++ +A GA RII D++ + + A+ LGA E
Sbjct: 206 SAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + N + P+++GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEH----VVSGNLVTPLPVILGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTN 132
VG V +++ GD+V CG C +CK N C + G+P +
Sbjct: 75 SVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKND-LGNPRGTLQDGTRRFTCS 133
Query: 133 GSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPET 180
G H V + Y + D ++ + PL S G A + A V P +
Sbjct: 134 GKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGS 193
Query: 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ LGA E
Sbjct: 194 TCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 45/242 (18%)
Query: 18 AWLLG----IKTLKIQPYHLPTLGPQDVKVRIKALG--ICGSDVHHFKTMRCANFIVKKP 71
AW G I+ +++ P P+ +VRI+ + +C +D++ + A F P
Sbjct: 14 AWKTGSPLCIEEIEVSP-------PKACEVRIQVIATCVCPTDINATDPKKKALF----P 62
Query: 72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
+V+GHECAGI+E VG V + + GD+V C C LC + NLC ++R F P
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 132 NGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAM--CEPL 164
+ L + VV A L ++ D +LE + C
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANLERVCLIGCGFS 181
Query: 165 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 224
S A A V P + + G G +GL ++ + GA RII D++ ++ A+ LGA
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241
Query: 225 DE 226
+
Sbjct: 242 TD 243
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 45/242 (18%)
Query: 18 AWLLG----IKTLKIQPYHLPTLGPQDVKVRIKALG--ICGSDVHHFKTMRCANFIVKKP 71
AW G I+ +++ P P+ +VRI+ + +C +D++ + A F P
Sbjct: 14 AWKTGSPLCIEEIEVSP-------PKACEVRIQVIATCVCHTDINATDPKKKALF----P 62
Query: 72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
+V+GHECAGI+E VG V + + GD+V C C LC + NLC ++R F P
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 132 NGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAM--CEPL 164
+ L + VV A L ++ D +LE + C
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANLERVCLIGCGFS 181
Query: 165 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 224
S A A V P + + G G +GL ++ + GA RII D++ ++ A+ LGA
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241
Query: 225 DE 226
+
Sbjct: 242 TD 243
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 38 PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
P+ +VRIK A+GIC +D H + N + P+++GHE AGI+E VG V +++ G
Sbjct: 31 PKAYEVRIKMVAVGICHTDDH----VVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPG 86
Query: 96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKVVHPAK 144
D+V CG C +CK N C + G+P G H + +
Sbjct: 87 DKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHFLGTST 145
Query: 145 LC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGSGPIGL 192
Y + D ++ + PL S G A A V P + + G G +GL
Sbjct: 146 FSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGL 205
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
++ +A GA RII D++ + + A+ LGA E
Sbjct: 206 SAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 38 PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
P+ +VRIK A+GIC +D H + N + P+++GHE AGI+E VG V +++ G
Sbjct: 31 PKAYEVRIKMVAVGICRTDDH----VVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPG 86
Query: 96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKVVHPAK 144
D+V CG C +CK N C + G+P G H + +
Sbjct: 87 DKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHFLGTST 145
Query: 145 LC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGSGPIGL 192
Y + D ++ + PL S G A A V P + + G G +GL
Sbjct: 146 FSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGL 205
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
++ +A GA RII D++ + + A+ LGA E
Sbjct: 206 SAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 38 PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
P+ +VRIK A+GIC +D H + N + P+++GHE AGI+E VG V +++ G
Sbjct: 31 PKAYEVRIKMVAVGICRTDDH----VVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPG 86
Query: 96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKVVHPAK 144
D+V CG C +CK N C + G+P G H + +
Sbjct: 87 DKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHFLGTST 145
Query: 145 LC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGSGPIGL 192
Y + D ++ + PL S G A A V P + + G G +GL
Sbjct: 146 FSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGL 205
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
++ +A GA RII D++ + + A+ LGA E
Sbjct: 206 SAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 27/232 (11%)
Query: 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKV------RIKALGICGSDVHHFKTMRCANFIV 68
N + G + L+++ P L + K+ ++ + ICGSD H ++ FIV
Sbjct: 3 NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR----GRFIV 58
Query: 69 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC------PE 122
K V+GHE G + E GS+V+ +++GD V++ ++CG C CK ++C P+
Sbjct: 59 PKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPD 118
Query: 123 MRF----FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGA-----MCEPLSVGVHAC 171
F +G A V+ P + K D E + + L G H C
Sbjct: 119 ADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC 178
Query: 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 223
A V P ++V I G+GP+G AR GA +I+ D + +RL + + G
Sbjct: 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG 230
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 38 PQDVKVRIKAL--GICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
PQ +VRIK L +C +D + + P ++GHE AGI+E VG V ++ G
Sbjct: 31 PQAGEVRIKILYTALCHTDAYTWSGKDPEGLF---PCILGHEAAGIVESVGEGVTEVQAG 87
Query: 96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFF-----------GSPPTNGSLAHKVVHPAK 144
D V C C CK+G NLC ++R NG + + +
Sbjct: 88 DHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTST 147
Query: 145 LC-YKLPDNVSLEEGAMCEPLS----------VGVHAC-RRANVGPETNVMIMGSGPIGL 192
Y + +VS+ + PL G+ A A V P +NV I G G +GL
Sbjct: 148 FSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGL 207
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
A+ GA RII D+D ++ A+ G +E
Sbjct: 208 AVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE 241
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A+GICG+D H + + P+++GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDH----VVSGTMVTPLPVILGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA------- 136
VG V +++ GD+V CG C +CK N C ++ S P G+L
Sbjct: 75 SVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYC--LKNDVSNP-QGTLQDGTSRFT 131
Query: 137 --HKVVHPAKLCYKLPDNVSLEEGAMCE-----PL----------SVGV-HACRRANVGP 178
K +H ++E A+ + PL S G A A V P
Sbjct: 132 CRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTP 191
Query: 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ + G G +GL ++ +A GA RII D++ + + A+ LGA E
Sbjct: 192 GSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 92/216 (42%), Gaps = 32/216 (14%)
Query: 38 PQDVKVRIKAL--GICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
PQ +VR+K L +C +D + + P V+GHE AGI+E VG V ++ G
Sbjct: 49 PQAGEVRVKVLYTALCHTDAYTWSGKDPEGLF---PCVLGHEAAGIVESVGEGVTEVQPG 105
Query: 96 DRVALEPGISCGHCSLCKAGSYNLCPEMR-----------------FFGSP-----PTNG 133
D V C C CK+G NLC ++R G P T+
Sbjct: 106 DHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTST 165
Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCE---PLSVGVHACRRANVGPETNVMIMGSGPI 190
+ VVH + K+ LE+ + P +G A V P + V + G G +
Sbjct: 166 FSQYTVVHDVSVA-KIDPVAPLEKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVFGLGTV 223
Query: 191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
GL A+A GA RII D+D ++ A+N G E
Sbjct: 224 GLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTE 259
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 29/226 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDH----VVSGTLVAPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTN 132
+G V ++ GD+V CG CS+CK NLC ++ P
Sbjct: 75 SIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCR 132
Query: 133 GSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPET 180
G H + + Y + D +S+ + PL S G A + A V +
Sbjct: 133 GKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGS 192
Query: 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 193 TCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 238
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 29/226 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDH----VVSGTLVAPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTN 132
+G V ++ GD+V CG CS+CK NLC ++ P
Sbjct: 75 SIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCR 132
Query: 133 GSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPET 180
G H + + Y + D +S+ + PL S G A + A V +
Sbjct: 133 GKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGS 192
Query: 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 193 TCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 238
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 15/228 (6%)
Query: 19 WLLGIKTLKIQPYHLP--TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
W ++ + P++ G +DV+ ++ G+C SD+H K + P+V GH
Sbjct: 20 WAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMY---PLVPGH 76
Query: 77 ECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM------RFFGSP 129
E G + EVGS+VK + VGD+V + + +C C C N CP+M +
Sbjct: 77 EIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGT 136
Query: 130 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGS 187
T G ++ +V + + PDN+ L+ GA +C ++V P ++ I+G
Sbjct: 137 ITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGL 196
Query: 188 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 235
G +G V + A+AFG+ +I+ ++ +N GAD + VS D E
Sbjct: 197 GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-SFLVSRDQE 243
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKV------RIKALGICGSDVHHFKTMRCANFI 67
N LG +++Q P + P+ K+ ++ + ICGSD H + A
Sbjct: 3 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61
Query: 68 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---R 124
+V+GHE G + E G +V++L++GD V++ ++CG C CK +C + R
Sbjct: 62 ---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 118
Query: 125 FFGSPP-------TNGSLAHKVVHPAKL-CYKLPDNVSLEE-----GAMCEPLSVGVHAC 171
G+ T G + +V A KLPD E + + L G H
Sbjct: 119 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA 178
Query: 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
A VGP + V + G+GP+GL +AR GA +I+ D++ RL+ A+ G E A +S
Sbjct: 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-EIADLS 237
Query: 232 TDIEM 236
D +
Sbjct: 238 LDTPL 242
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 30/227 (13%)
Query: 21 LGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAG 80
L ++T+ + P +V+++I A GICGSD K + + F P+++GHE G
Sbjct: 22 LSLETITVAPPK-----AHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVG 72
Query: 81 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVV 140
++E +G+ V ++ GD+V CG C CK+ + N C + + +
Sbjct: 73 VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 132
Query: 141 HPAKLCYKLPDNVSLEEGAMCEPLSVG-------VHAC--------------RRANVGPE 179
K Y L + E + ++V + +C A V P
Sbjct: 133 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPG 192
Query: 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ + G G +G ++ +A GA RII + A LGA E
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSD----DQVVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G +GL ++ +A GA RII D++ R + A+ +GA E
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE 239
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
+E K + AW G K L I+ + +V+++I A +C +D + T+ A+
Sbjct: 3 NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPE 58
Query: 68 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF- 126
P+++GHE AGI+E VG V L+ GD V CG C C NLC ++R
Sbjct: 59 GCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118
Query: 127 --GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SV 166
G P S + H + Y + ++S+ + PL S
Sbjct: 119 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178
Query: 167 GV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
G A A + P + + G G +GL ++ + GA RII D++ + + A+ GA
Sbjct: 179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238
Query: 226 E 226
E
Sbjct: 239 E 239
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
+E K + AW G K L I+ + +V+++I A +C +D + T+ A+
Sbjct: 2 NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPE 57
Query: 68 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF- 126
P+++GHE AGI+E VG V L+ GD V CG C C NLC ++R
Sbjct: 58 GCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117
Query: 127 --GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SV 166
G P S + H + Y + ++S+ + PL S
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 167 GV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
G A A + P + + G G +GL ++ + GA RII D++ + + A+ GA
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 226 E 226
E
Sbjct: 238 E 238
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
+E K + AW G K L I+ + +V+++I A +C +D + T+ A+
Sbjct: 3 NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPE 58
Query: 68 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF- 126
P+++GHE AGI+E VG V L+ GD V CG C C NLC ++R
Sbjct: 59 GCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118
Query: 127 --GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SV 166
G P S + H + Y + ++S+ + PL S
Sbjct: 119 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178
Query: 167 GV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
G A A + P + + G G +GL ++ + GA RII D++ + + A+ GA
Sbjct: 179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238
Query: 226 E 226
E
Sbjct: 239 E 239
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K I+ + +V++++ A GIC SD H + + P++ GHE AGI+E
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE---------MRFFGSPPT-NG 133
+G V ++ GD+V CG C +CK N C + M+ S T G
Sbjct: 75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
H + + Y + D +S+ + PL S G A + A V +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+ G G GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 195 CAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 39 QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98
++V+++I A GIC +D H K + F P+++GHE GI+E +G V +++ GD+V
Sbjct: 34 KEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEATGIVESIGEGVTTVKPGDKV 89
Query: 99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------PTNGSLAHKVVHPAKLC-YK 148
C C+ C+ NLC G G H ++ + Y
Sbjct: 90 IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYT 149
Query: 149 LPDNVSLEEGAMCEP----------LSVGV-HACRRANVGPETNVMIMGSGPIGLVTLLA 197
+ D S+ + P S G A + V P + ++ G G +GL ++
Sbjct: 150 VVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMG 209
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADE 226
++ GA RII D++ + A +GA E
Sbjct: 210 CKSAGASRIIGIDLNKDKFEKAMAVGATE 238
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 39 QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98
++V+++I A GIC +D H K + F P+++GHE GI+E +G V +++ GD+V
Sbjct: 34 KEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEATGIVESIGEGVTTVKPGDKV 89
Query: 99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------PTNGSLAHKVVHPAKLC-YK 148
C C+ C+ NLC G G H ++ + Y
Sbjct: 90 IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYT 149
Query: 149 LPDNVSLEEGAMCEP----------LSVGV-HACRRANVGPETNVMIMGSGPIGLVTLLA 197
+ D S+ + P S G A + V P + ++ G G +GL ++
Sbjct: 150 VVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMG 209
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADE 226
++ GA RII D++ + A +GA E
Sbjct: 210 CKSAGASRIIGIDLNKDKFEKAMAVGATE 238
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
+LGI L P G D VR A+ C SD+H T+ +K M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIH---TVFEGALGDRKNMILGHEAV 62
Query: 80 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN------G 133
G + EVGSEVK + GDRV + P + SL + G +N G
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG 121
Query: 134 SLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
H V+ A + LP ++ LE M + ++ G H A++ V ++G GP+G
Sbjct: 122 EYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVG 179
Query: 192 LVTLLAARAFGAPRII 207
L+ + A+ GA RII
Sbjct: 180 LMAVAGAKLRGAGRII 195
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 85/209 (40%), Gaps = 30/209 (14%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSEVK +
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
GDRV + S + G + M FF + +LAH
Sbjct: 77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
LP + LE M + ++ G H AN+ V ++G GP+GL+++
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAG 185
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADE 226
A GA RI IA GA +
Sbjct: 186 ANHLGAGRIFAVGSRKHCCDIALEYGATD 214
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 33/229 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH-FKTMRCANFIVKKPMVIGHECAGII 82
K L I+ + +++++I A G+C +D++H F+ F P+V+GHE AGI+
Sbjct: 19 KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF----PVVLGHEGAGIV 74
Query: 83 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE-------------------- 122
E VG V + G++V CG C C++ N C +
Sbjct: 75 ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCK 134
Query: 123 ----MRFFGSPPTNGSLAHKVVHPAKLCYKLP-DNVSLEEGAMCEPLSVGVHACRRANVG 177
++F G+ + + AK+ P D V L + V+ A V
Sbjct: 135 GRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNT---AKVE 191
Query: 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
P + + G G +GL ++ + GA RII D++ + A+ GA +
Sbjct: 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 18 AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI-VKKPMVIGH 76
AW G K L I+ + +V+++I A +C +D T+ + F + P+++GH
Sbjct: 16 AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDA----TVIDSKFEGLAFPVIVGH 70
Query: 77 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL- 135
E AGI+E +G V +++ GD+V C C C + NLC ++ SP ++ L
Sbjct: 71 EAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLM 130
Query: 136 ------------------------AHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA 170
+ VV L K+ D+ +LE + S G A
Sbjct: 131 EDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLA-KIDDDANLERVCLLGCGFSTGYGA 189
Query: 171 C-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
A V P + + G G +GL ++ +A GA RII D++ ++ A+ LGA +
Sbjct: 190 AINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATD 246
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 30/190 (15%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSEVK +
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
GDRV + S + G + M FF + +LAH
Sbjct: 77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
LP + LE M + ++ G H A++ V ++G GP+GL+ +
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAG 185
Query: 198 ARAFGAPRII 207
A+ GA RII
Sbjct: 186 AKLRGAGRII 195
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 12/214 (5%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
+LGI + +P GP D VR AL C SD H T+ + M++GHE
Sbjct: 6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTH---TVWAGAIGDRHDMILGHEAV 62
Query: 80 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN--GSLAH 137
G I +VGS VK L+VGD+V + P I+ Y + G +N +
Sbjct: 63 GQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFS 121
Query: 138 KVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETNVMIMGSGPIGL 192
+V H A L LP ++ E+ M + + G H AN+ V ++G GP+GL
Sbjct: 122 EVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGL 180
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+++ A GA RI IA GA +
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD 214
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 12/214 (5%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
+LGI + +P GP D VR AL C SD H T+ + M++GHE
Sbjct: 6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTH---TVWAGAIGDRHDMILGHEAV 62
Query: 80 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN--GSLAH 137
G I +VGS VK L+VGD+V + P I+ Y + G +N +
Sbjct: 63 GQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFS 121
Query: 138 KVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETNVMIMGSGPIGL 192
+V H A L LP ++ E+ M + + G H AN+ V ++G GP+GL
Sbjct: 122 EVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGL 180
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
+++ A GA RI IA GA +
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD 214
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 30/190 (15%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSEVK +
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
GDRV + S + G + M FF + +LAH
Sbjct: 77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
LP + LE M + ++ G H A++ V ++G GP+GL+ +
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAG 185
Query: 198 ARAFGAPRII 207
A+ GA RII
Sbjct: 186 AKLRGAGRII 195
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
+LGI L P G D VR A+ C SD+H T+ +K M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIH---TVFEGALGDRKNMILGHEAV 62
Query: 80 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN------G 133
G + EVGSEVK + GDRV + P + SL + G +N G
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG 121
Query: 134 SLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
H V+ A + LP ++ LE M + ++ G H A++ ++V+++G G +G
Sbjct: 122 EYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVG 179
Query: 192 LVTLLAARAFGAPRII 207
L+ + A+ GA RII
Sbjct: 180 LMGIAGAKLRGAGRII 195
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
+LGI L P G D VR A+ C SD+H T+ +K M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIH---TVFEGALGDRKNMILGHEAV 62
Query: 80 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN------G 133
G + EVGSEVK + GDRV + P + SL + G +N G
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG 121
Query: 134 SLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
H V+ A + LP ++ LE M + ++ G H A++ ++V+++G G +G
Sbjct: 122 EYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVG 179
Query: 192 LVTLLAARAFGAPRII 207
L+ + A+ GA RII
Sbjct: 180 LMGIAGAKLRGAGRII 195
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 26/241 (10%)
Query: 8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
+E K + AW G K L I+ + +V+++I A +C +D + T+ A+
Sbjct: 2 NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPE 57
Query: 68 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF- 126
P+++GH AGI+E VG V L+ GD V CG C C NLC ++R
Sbjct: 58 GCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117
Query: 127 --GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SV 166
G P S + H + Y + ++S+ + PL S
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 167 GV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
G A A + P + + G G +GL ++ + GA RII D++ + + A+ GA
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 226 E 226
E
Sbjct: 238 E 238
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
+LGI L P G D VR A+ C SD+H T+ +K M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIH---TVFEGALGDRKNMILGHEAV 62
Query: 80 GIIEEVGSEVKSLEVGDRV----------ALE-----PGISCGHCSLCKAGSYNLCPEMR 124
G + EVGSEVK + GDRV +LE P S G + K ++
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDGVFGE 122
Query: 125 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVM 183
+F + +LA LP ++ LE M + ++ G H A++ ++V+
Sbjct: 123 YFHVNDADMNLA-----------ILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVV 171
Query: 184 IMGSGPIGLVTLLAARAFGAPRII 207
++G G +GL+ + A+ GA RII
Sbjct: 172 VIGIGAVGLMGIAGAKLRGAGRII 195
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSEVK +
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
GDRV + S + G + M FF + +LAH
Sbjct: 77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
LP + LE M + ++ G H A++ ++V+++G G +GL+ +
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAG 185
Query: 198 ARAFGAPRII 207
A+ GA RII
Sbjct: 186 AKLRGAGRII 195
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSEVK +
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
GDRV + S + G + M FF + +LAH
Sbjct: 77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
LP + LE M + ++ G H A++ ++V+++G G +GL+ +
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAG 185
Query: 198 ARAFGAPRII 207
A+ GA RII
Sbjct: 186 AKLRGAGRII 195
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 36 LGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
+GP+DV + I GIC SD+H + PM+ GHE AGII+EVG VK ++G
Sbjct: 27 VGPRDVLIDILYAGICHSDIHSAYSEWKEGIY---PMIPGHEIAGIIKEVGKGVKKFKIG 83
Query: 96 DRVALEPGI-SCGHCSLCKAGSYNLCPEM--------RFFGSPPTNGSLAHKVVHPAKLC 146
D V + + SC C CK C ++ F + P G ++ +V
Sbjct: 84 DVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYV 143
Query: 147 YKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA 203
+ N LE+ A +C ++ + + V T V + G G +G + + A A GA
Sbjct: 144 ISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA 201
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
L I+ ++P ++V +RI G+C +D+ +K + + P+++GHE AG I EV
Sbjct: 16 LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGF-RLPIILGHENAGTIVEV 74
Query: 86 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 145
G E+ ++ GD V + C C+ G +N+C G G + +V ++
Sbjct: 75 G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW 133
Query: 146 CYKLPDNVSLEEGAMCEPLSVGVHACRRA----NVGPETNVMIMGSGPIGLVTLLAARAF 201
KL +E + + + + A R+A + E V++ G G + + T+ +A
Sbjct: 134 LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKAL 193
Query: 202 GAPRIIITDVDVQR----LSIARNLGADETAKV 230
IT V + R A LGAD +++
Sbjct: 194 MKN---ITIVGISRSKKHRDFALELGADYVSEM 223
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 90/218 (41%), Gaps = 20/218 (9%)
Query: 37 GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
GP DVK+ I G+C SD+H ++ P V GHE G + VG +V+ GD
Sbjct: 46 GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIVGRVVAVGDQVEKYAPGD 102
Query: 97 RVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK--------VVHPAKLCY 147
V + + SC HC C+ G N C M + PT H VVH Y
Sbjct: 103 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHER---Y 159
Query: 148 KLPDNVSLEEGAMCEP-LSVGVHA---CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA 203
L E+ A P L G+ R GP V ++G G +G + + A A GA
Sbjct: 160 VLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA 219
Query: 204 PRIIITDVDVQRLSIARNLGADETAKVSTDIEMWGRYK 241
+ T + +R A+ LGADE EM K
Sbjct: 220 HVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLK 256
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 37 GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
GPQ V VR KA+G+ D ++ + A F+ P +G E AG++E VG EV +VGD
Sbjct: 27 GPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---PSGLGAEGAGVVEAVGDEVTRFKVGD 83
Query: 97 RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE 156
RVA +G+ P G+ + V P KL D+VS E
Sbjct: 84 RVA--------------------------YGTGPL-GAYSEVHVLPEANLVKLADSVSFE 116
Query: 157 EGA--MCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213
+ A M + L+V + V P E + +G +G + A+A GA ++I T
Sbjct: 117 QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSP 175
Query: 214 QRLSIARNLGADETAKVS 231
++ + A+ LGA ET S
Sbjct: 176 EKAAHAKALGAWETIDYS 193
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 9 EGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKTMRCA 64
EG Q+ W K K Y D+ ++I+A G+CGSD+H H+ M
Sbjct: 8 EGIAIQSHEDW----KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM--- 60
Query: 65 NFIVKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGI-SCGHCSLCKAGSYNLCPE 122
K P+V+GHE G + ++G + S L+VG RV + + SC C CK + C +
Sbjct: 61 ----KMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTK 116
Query: 123 MRFFGSPP------TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRA 174
S P + G A+ V +P+N+ A +C L+V R
Sbjct: 117 FVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTV-YSPLVRN 175
Query: 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
GP V I+G G IG + L ++A GA +I+ +R A +GAD
Sbjct: 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED-AMKMGAD 225
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 27 KIQPYHLPTLGPQ--DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEE 84
K++ +P P+ ++ + +K G+C +D+H + VK P+V GHE AG++
Sbjct: 17 KLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDW--PLPVKLPLVGGHEGAGVVVG 74
Query: 85 VGSEVKSLEVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 143
+G VK ++GD ++ SC C C+ G+ + CP G +GS A
Sbjct: 75 MGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQYATADA 133
Query: 144 KLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARA 200
+P L + A +C ++V A + AN+ V I G +G +G + + A+A
Sbjct: 134 VQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKA 192
Query: 201 FGAPRIIITDVDVQRLSIARNLGAD 225
G R++ D + + R++G +
Sbjct: 193 MGY-RVLGIDGGEGKEELFRSIGGE 216
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 39/170 (22%)
Query: 67 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 126
+ K P V+G + G++E VG+EV GD V +
Sbjct: 56 VSKAPRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------YYS 90
Query: 127 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-----------VGVHACRRAN 175
GSP NGS A + +L K P N+S E+ A+ PL+ G+ R N
Sbjct: 91 GSPDQNGSNAEYQLINERLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNEN 149
Query: 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
G +T ++I G+G +G + A+A+G R+I T + + + +GAD
Sbjct: 150 EG-KTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 37 GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
GP V++R A+G+ D +H + + + P+V+G E A ++EEVG V VG+
Sbjct: 27 GPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGE 86
Query: 97 RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE 156
RV C+ P G+ + + ++PA+ K+P ++ L+
Sbjct: 87 RV----------CTCL-----------------PPLGAYSQERLYPAEKLIKVPKDLDLD 119
Query: 157 E----GAMCEPLSVGVHACRRANVGPETNVMI-MGSGPIGLVTLLAARAFGAPRIIITDV 211
+ G M + ++ + V P V+I +G +G + + AR GA +I T
Sbjct: 120 DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVS 178
Query: 212 DVQRLSIARNLGADETAKVST 232
++ AR LG T ST
Sbjct: 179 TEEKAETARKLGCHHTINYST 199
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 38/142 (26%)
Query: 22 GIKTLKIQPYHLPTLGPQD--VKVRIKALGICGSDVHHFKTMRCANFIV--KKPMVIGHE 77
G+ L++ +P PQD +K+R+KA G+ D+ +R N K P+V G E
Sbjct: 14 GLNKLRLFRKAMPE--PQDGELKIRVKACGLNFIDL----MVRQGNIDNPPKTPLVPGFE 67
Query: 78 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
C+GI+E +G VK E+GDRV +YN E+
Sbjct: 68 CSGIVEALGDSVKGYEIGDRV-------------MAFVNYNAWAEV-------------- 100
Query: 138 KVVHPAKLCYKLPDNVSLEEGA 159
V P + YK+PD++S E A
Sbjct: 101 -VCTPVEFVYKIPDDMSFSEAA 121
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
LK+ +P G D+ VR A+ + D +T + P V + +G++E V
Sbjct: 41 LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAF--PFVPASDXSGVVEAV 98
Query: 86 GSEVKSLEVGDRV--ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 143
G V GDRV PG G + G+ G+ P G L+ VV P
Sbjct: 99 GKSVTRFRPGDRVISTFAPGWLDG----LRPGTGRTPAYETLGGAHP--GVLSEYVVLPE 152
Query: 144 KLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 201
P ++ E + C L+ + ++ V++ G+G + L L A+A
Sbjct: 153 GWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKAT 212
Query: 202 GAPRIIITDVDVQRLSIARNLGAD 225
GA +I+T ++L A LGAD
Sbjct: 213 GA-EVIVTSSSREKLDRAFALGAD 235
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 31 YHLPTLGPQDVKVRIKALGICGSDVHHFKT-MRCANFIVKKPMVIGHECAGIIEEVGSEV 89
Y L GP+DV +RI GIC +D+H K + +N+ PMV GHE G + EVGS+V
Sbjct: 27 YTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82
Query: 90 KSLEVGD-RVALEPGISCGHCSLCKAGSYNLCPEM------RFFGSPPTNGSLAHKVVHP 142
VGD CG CS C+ CP+ + PT G A V
Sbjct: 83 SKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVH 142
Query: 143 AKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 200
K K+P+ +++E+ A +C ++V P I+G G +G + + A+A
Sbjct: 143 QKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA 202
Query: 201 FGAPRIIITDVDVQRLSIARNLGADE 226
G +I+ + +R ++LGAD+
Sbjct: 203 MGHHVTVISSSNKKREEALQDLGADD 228
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 92/227 (40%), Gaps = 32/227 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH--FKTMRCANFIVKKPMV-------- 73
K++ + +P LGP + V + A + + VH F+ + F+ + V
Sbjct: 56 KSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHD 115
Query: 74 -----IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRF 125
IG + AG++ G V + + GD V C L + +N L PE R
Sbjct: 116 LPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRI 171
Query: 126 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPE 179
+G G LA + + PD++S EE A P V A R+ A +
Sbjct: 172 WGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQG 229
Query: 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
NV+I G SG +G A A GA I + Q+ I R +GA+
Sbjct: 230 DNVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRAMGAE 275
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 26/200 (13%)
Query: 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP--MVIGHECA 79
G++ + L + G +K+R GICG+D + + K +V+GHE
Sbjct: 12 GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDFLVLGHEAI 69
Query: 80 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNGSLAH 137
G++EE GD V CG C C G + C F G +G +
Sbjct: 70 GVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMRE 126
Query: 138 KVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHACRRANVGPETNV 182
K K+P ++ + G + +PL+ V V C + V
Sbjct: 127 WWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCR-KV 184
Query: 183 MIMGSGPIGLVTLLAARAFG 202
+++G+GPIG++ L R +G
Sbjct: 185 LVVGTGPIGVLFTLLFRTYG 204
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 26/200 (13%)
Query: 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP--MVIGHECA 79
G++ + L + G +K+R GICG+D + + K +V+GHE
Sbjct: 12 GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAI 69
Query: 80 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNGSLAH 137
G++EE GD V CG C C G + C F G +G +
Sbjct: 70 GVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMRE 126
Query: 138 KVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHACRRANVGPETNV 182
K K+P ++ + G + +PL+ V V C + V
Sbjct: 127 WWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCR-KV 184
Query: 183 MIMGSGPIGLVTLLAARAFG 202
+++G+GPIG++ L R +G
Sbjct: 185 LVVGTGPIGVLFTLLFRTYG 204
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 10 GDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVK 69
G + + A+ ++ + +P L D+ V+ +A+GI D +K ++
Sbjct: 1 GXEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVD---WKFIKANPINWS 57
Query: 70 KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 129
V G + AG+I +VG++V S +G RVA H SL + GS+
Sbjct: 58 NGHVPGVDGAGVIVKVGAKVDSKXLGRRVAY-------HTSLKRHGSF------------ 98
Query: 130 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSG 188
A V LPDN+S E A PL A + + + V+I+G G
Sbjct: 99 ------AEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFG 152
Query: 189 PI 190
+
Sbjct: 153 AV 154
>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant
From Haloferax Mediterranei
Length = 357
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 43 VRIKALGICGSDVHHFKTMRCANFIV-KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALE 101
VR +G+CG+D H F + +V+GHE G++ V LE GD V
Sbjct: 30 VRTLRVGVCGTD-HEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIVV-- 84
Query: 102 PGI----SCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSL 155
P + + G + ++ P+ +F G +G ++ P K ++P + +
Sbjct: 85 PTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA- 143
Query: 156 EEGAMCEPLSVG------VHACRRANVGPETNVMIMGSGPIGLVTL 195
E G + EP+S+ +A R A ++ ++G+G +GL+TL
Sbjct: 144 ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTL 189
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 36/171 (21%)
Query: 38 PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI---GHECAGIIEEVGSEVKSLEV 94
P+D +V IK + CG V+ +T + +KP++ G + AG+IE VG + +
Sbjct: 55 PKDHQVLIK-VHACG--VNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKK 111
Query: 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS 154
GDRV IS G+ A + + YKLP+ +
Sbjct: 112 GDRVFTSSTISGGYAEYALAADHTV---------------------------YKLPEKLD 144
Query: 155 LEEGAMCE-PLSVGVHA-CRRANVGPETNVMIMG-SGPIGLVTLLAARAFG 202
++GA P A A V +V++ G SG +GL ARA+G
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYG 195
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 28/127 (22%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
P L V VR++A+ I SD +MR F +G + AG + VGS+V ++
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDT----SMR-GQFATPW-AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 94 VGDRVALEPGISCGHCSLCKAGSYN-LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
VGDRV G+ N +CP P G+ + V ++ K+P
Sbjct: 86 VGDRV---------------YGAQNEMCPRT------PDQGAFSQYTVTRGRVWAKIPKG 124
Query: 153 VSLEEGA 159
+S E+ A
Sbjct: 125 LSFEQAA 131
>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax
Mediterranei
pdb|2VWG|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Gluconolactone.
pdb|2VWH|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Glucose.
pdb|2VWP|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadph And Zn.
pdb|2VWQ|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp And Zn
Length = 357
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI----SCGHCSLCKAGSYNLCPEMRFF- 126
+V+GHE G++ V LE GD V P + + G + ++ P+ +F
Sbjct: 59 LVLGHEAVGVV--VDPNDTELEEGDIVV--PTVRRPPASGTNEYFERDQPDMAPDGMYFE 114
Query: 127 -GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG------VHACRRANVGPE 179
G +G ++ P K ++P + + E G + EP+S+ +A R A
Sbjct: 115 RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDP 173
Query: 180 TNVMIMGSGPIGLVTL 195
++ ++G+G +GL+TL
Sbjct: 174 SSAFVLGNGSLGLLTL 189
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 28/127 (22%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
P L V VR++A+ I SD MR +G + AG + VGS+V ++
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDTK----MRGQ--FATPWAFLGTDYAGTVVAVGSDVTHIQ 85
Query: 94 VGDRVALEPGISCGHCSLCKAGSYN-LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
VGDRV G+ N +CP P G+ + V ++ K+P
Sbjct: 86 VGDRV---------------YGAQNEMCPRT------PDQGAFSQYTVTRGRVWAKIPKG 124
Query: 153 VSLEEGA 159
+S E+ A
Sbjct: 125 LSFEQAA 131
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
G +K + Y +P++ +++ ++ K G+ + + R + +KP V+G E +G
Sbjct: 19 GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESY----FRKGIYPCEKPYVLGREASGT 74
Query: 82 IEEVGSEVKSLEVGDRVA 99
+ G V + EVGD+VA
Sbjct: 75 VVAKGKGVTNFEVGDQVA 92
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 28/225 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDV----------HHF--KTMRCANFIVKKP 71
K+L++ +P L P +V V + A I + V HF + R + +
Sbjct: 48 KSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHD 107
Query: 72 M---VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 128
V+G +C+G++ G V+ + GD V + P G L E R +G
Sbjct: 108 QPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPA-HVDEQEPATHGDGMLGTEQRAWGF 166
Query: 129 PPTNGSLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNV 182
G LA + VV ++L K P +++ EE A+ PL G + R A + V
Sbjct: 167 ETNFGGLAEYGVVRASQLLPK-PAHLTWEEAAVS-PLCAGTAYRMLVSDRGAQMKQGDIV 224
Query: 183 MIMG-SGPIGLVTL-LAARAFGAPRIIITDVDVQRLSIARNLGAD 225
+I G SG +G + G P +++ Q+ + R LG D
Sbjct: 225 LIWGASGGLGSYAIQFVKNGGGIPVAVVS--SAQKEAAVRALGCD 267
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH--FKTMRCANFIVK----KPM----- 72
K++ + +P LGP + V + A + + V F+ + F+ + P+
Sbjct: 74 KSIHLDEVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHD 133
Query: 73 ----VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN------LCPE 122
+IG + AG++ G V + + GD V HC + S + L PE
Sbjct: 134 LPYHIIGSDLAGVVLRTGPGVNAWQPGDEV-------VAHCLSVELESPDGHDDTMLDPE 186
Query: 123 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANV 176
R +G G LA + P +++ EE A P V A R+ A +
Sbjct: 187 QRIWGFETNFGGLAEIALVKTNQLMPKPKHLTWEEAAA--PGLVNSTAYRQLVSRNGAAM 244
Query: 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
NV+I G SG +G A A GA I + Q+ I R++GA+
Sbjct: 245 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRSMGAE 293
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 40 DVKVRIKALGICGSDVHHFKTMRCANFIVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRV 98
+++V KA+GI D + +R + P +G E AGI+ +VGS VK ++ GDRV
Sbjct: 30 EIQVENKAIGINFIDTY----IRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRV 85
Query: 99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG 158
+ G+Y S H ++ A LP +S E+
Sbjct: 86 VY---------AQSALGAY----------------SSVHNII--ADKAAILPAAISFEQA 118
Query: 159 A--MCEPLSVGVHACRRANVGPETNVMI-MGSGPIGLVTLLAARAFGAPRIIITDVDVQR 215
A + L+V + + P+ + +G +GL+ A+A GA ++I T Q+
Sbjct: 119 AASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQK 177
Query: 216 LSIARNLGA 224
A GA
Sbjct: 178 AQSALKAGA 186
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 3 EAIRDDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMR 62
EA G A L G + L P GP V V +KA G+C D + T
Sbjct: 13 EAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPD--YLMTKG 70
Query: 63 CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98
++ P V G E AG++ E ++ GDRV
Sbjct: 71 EYQLKMEPPFVPGIETAGVVRSA-PEGSGIKPGDRV 105
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 37/176 (21%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--VIGHECAGIIEEVGSEVK 90
LP G +V VR +A+G+ D+ R ++ K ++G E +G I VG V
Sbjct: 50 LPVAGEGEVLVRAEAIGVNRPDIAQ----RQGSYPPPKDASPILGLELSGEIVGVGPGVS 105
Query: 91 SLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRFFGSPPTNGSLAHKVVHPAKLCY 147
VGD+V C L G+Y L P + P G A K + +
Sbjct: 106 GYAVGDKV----------CGLANGGAYAEYCLLPAGQIL--PFPKGYDAVKAAALPETFF 153
Query: 148 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA 203
+ N+ + + E SV +H G+ IG + ARAFGA
Sbjct: 154 TVWANL-FQXAGLTEGESVLIHG---------------GTSGIGTTAIQLARAFGA 193
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 58 FKTMRCANFIVKK-----PMVIGHECAGIIEEVGSEVKSLEVGDRV 98
+KT + F+ KK P +G++ +G + E+GS+V ++ +GD+V
Sbjct: 50 YKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKV 95
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
P P V V+I+A G D + + P ++G + AG + VG EV S
Sbjct: 28 PQPAPGQVLVQIEASGTNPLDAK-IRAGEAPHAQQPLPAILGXDLAGTVVAVGPEVDSFR 86
Query: 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 130
VGD V G++ G L + + R S P
Sbjct: 87 VGDAVF---GLTGGVGGLQGTHAQFAAVDARLLASKP 120
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 33 LPTLGP--QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90
LP P D+ V +KA+ + D +K R VIG++ AGI+ VG +V
Sbjct: 45 LPKPAPAGHDILVEVKAVSVNPVD---YKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVT 101
Query: 91 SLEVGDRV 98
GD V
Sbjct: 102 LFRPGDEV 109
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE--VK 90
+P GP V +++ I SDV K + +P G E G I G E K
Sbjct: 44 VPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPA--GFEGVGTIVAGGDEPYAK 101
Query: 91 SLEVGDRVALEPGIS 105
SL VG RVA G+S
Sbjct: 102 SL-VGKRVAFATGLS 115
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 184 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEMWGRYKMQ 243
+ G G + L + RAF R+ D DV L + L ++ + D+++ G YK +
Sbjct: 226 VFGYGVMLLELITGQRAFDLARLA-NDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDE 284
Query: 244 WVQALM 249
V+ L+
Sbjct: 285 EVEQLI 290
>pdb|3K30|A Chain A, Histamine Dehydrogenase From Nocardiodes Simplex
pdb|3K30|B Chain B, Histamine Dehydrogenase From Nocardiodes Simplex
Length = 690
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 159 AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 218
+M E G H R + V+++G+GP GL AARA G + DV
Sbjct: 371 SMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLE---AARALG-----VRGYDVVLAEA 422
Query: 219 ARNLGADETAKVST-DIEMWGRYK 241
R+LG T + + + WGR K
Sbjct: 423 GRDLGGRVTQESALPGLSAWGRVK 446
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 29 QPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE 88
+P LG +V++ ++A G+ +F+ A + +G E AG++ E G
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGV------NFRDALIALGMYPGVASLGSEGAGVVVETGPG 282
Query: 89 VKSLEVGDRV 98
V L GDRV
Sbjct: 283 VTGLAPGDRV 292
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 184 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEMWGRYKMQ 243
+ G G + L + RAF R+ D DV L + L ++ + D+++ G YK +
Sbjct: 218 VFGYGVMLLELITGQRAFDLARLA-NDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDE 276
Query: 244 WVQALM 249
V+ L+
Sbjct: 277 EVEQLI 282
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K ++++ L + DV+V++ A I SD++ + + + P V G+E +
Sbjct: 40 KVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQG--NYGLLPELPAVGGNEGVAQVV 97
Query: 84 EVGSEVKSLEVGDRV 98
VGS V L+ GD V
Sbjct: 98 AVGSNVTGLKPGDWV 112
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of
Human Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of
Human Fas Ii
Length = 344
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
K ++++ L + DV+V++ A I SD++ + + + P V G+E +
Sbjct: 27 KVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQG--NYGLLPELPAVGGNEGVAQVV 84
Query: 84 EVGSEVKSLEVGDRV 98
VGS V L+ GD V
Sbjct: 85 AVGSNVTGLKPGDWV 99
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVR----IKALGICGSDVHHFKTMRCANFIV 68
QNM ++ I H ++ P DV +R AL + +H ++ F
Sbjct: 39 TQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLH--VKIKGEEF-- 94
Query: 69 KKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98
P+ +G + +G++ E G +VK + GD V
Sbjct: 95 --PLTLGRDVSGVVMECGLDVKYFKPGDEV 122
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,573,375
Number of Sequences: 62578
Number of extensions: 301563
Number of successful extensions: 1045
Number of sequences better than 100.0: 118
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 767
Number of HSP's gapped (non-prelim): 148
length of query: 249
length of database: 14,973,337
effective HSP length: 96
effective length of query: 153
effective length of database: 8,965,849
effective search space: 1371774897
effective search space used: 1371774897
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)