Query 025713
Match_columns 249
No_of_seqs 124 out of 449
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 15:58:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025713.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025713hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 3.4E-93 1.2E-97 630.5 20.7 230 1-231 1-241 (248)
2 3iqu_A 14-3-3 protein sigma; s 100.0 4.6E-92 1.6E-96 619.7 18.2 222 3-224 6-236 (236)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 2.5E-91 8.6E-96 621.1 21.0 223 4-226 30-261 (261)
4 1o9d_A 14-3-3-like protein C; 100.0 6.3E-91 2.2E-95 620.5 20.2 233 2-234 5-248 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 1.7E-89 5.8E-94 604.0 21.0 222 4-225 4-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 1.4E-88 4.9E-93 604.9 20.4 223 3-226 26-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 2E-86 6.7E-91 591.2 15.1 221 4-229 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 2.6E-77 9E-82 522.2 16.1 206 4-221 2-226 (227)
9 3n71_A Histone lysine methyltr 92.9 0.52 1.8E-05 44.7 10.0 58 138-196 368-425 (490)
10 3qwp_A SET and MYND domain-con 92.5 0.64 2.2E-05 43.1 9.9 59 138-197 346-404 (429)
11 3qww_A SET and MYND domain-con 91.5 0.87 3E-05 42.4 9.6 59 138-197 357-415 (433)
12 3qww_A SET and MYND domain-con 90.9 0.44 1.5E-05 44.5 7.0 59 138-197 315-373 (433)
13 3n71_A Histone lysine methyltr 90.1 0.55 1.9E-05 44.5 7.0 58 138-196 326-383 (490)
14 3edt_B KLC 2, kinesin light ch 90.0 0.57 1.9E-05 37.8 6.1 56 138-194 102-157 (283)
15 3u3w_A Transcriptional activat 89.5 0.85 2.9E-05 38.6 7.1 57 138-196 172-228 (293)
16 3edt_B KLC 2, kinesin light ch 88.9 1.4 4.8E-05 35.4 7.7 58 138-196 144-201 (283)
17 3qwp_A SET and MYND domain-con 87.4 0.58 2E-05 43.4 4.9 58 138-196 304-361 (429)
18 4gcn_A Protein STI-1; structur 87.4 1.8 6.1E-05 32.1 6.9 48 138-194 25-72 (127)
19 3ulq_A Response regulator aspa 87.1 2.3 7.9E-05 37.0 8.5 151 29-194 7-173 (383)
20 3nf1_A KLC 1, kinesin light ch 86.1 2.6 8.8E-05 34.5 7.8 59 137-196 169-227 (311)
21 3rkv_A Putative peptidylprolyl 82.4 2.1 7.1E-05 32.5 5.3 54 138-192 28-91 (162)
22 3ro3_A PINS homolog, G-protein 81.4 5.1 0.00017 28.7 7.0 55 138-195 26-80 (164)
23 3nf1_A KLC 1, kinesin light ch 81.2 2.9 0.0001 34.1 6.1 57 138-195 128-184 (311)
24 1elr_A TPR2A-domain of HOP; HO 81.1 9.6 0.00033 26.3 8.2 53 138-192 55-107 (131)
25 3ro3_A PINS homolog, G-protein 80.6 7.2 0.00025 27.9 7.6 55 138-195 66-120 (164)
26 3q15_A PSP28, response regulat 80.0 4.1 0.00014 35.5 7.0 148 33-195 12-172 (378)
27 4gco_A Protein STI-1; structur 79.8 5.8 0.0002 29.3 6.9 46 138-192 30-75 (126)
28 2qfc_A PLCR protein; TPR, HTH, 78.0 5.2 0.00018 33.6 6.8 55 138-194 172-226 (293)
29 3ro2_A PINS homolog, G-protein 77.0 7.7 0.00026 31.5 7.4 52 138-194 22-73 (338)
30 4gcn_A Protein STI-1; structur 76.5 7.5 0.00026 28.5 6.7 53 138-192 59-111 (127)
31 4g1t_A Interferon-induced prot 76.0 6.1 0.00021 34.8 7.0 54 138-192 68-122 (472)
32 3u3w_A Transcriptional activat 75.9 8.3 0.00028 32.2 7.5 54 138-194 132-185 (293)
33 3gw4_A Uncharacterized protein 75.0 9.7 0.00033 29.0 7.2 55 138-194 83-137 (203)
34 2qfc_A PLCR protein; TPR, HTH, 74.4 13 0.00045 31.0 8.4 64 138-207 213-276 (293)
35 2l6j_A TPR repeat-containing p 74.0 11 0.00039 25.5 6.7 45 138-191 21-65 (111)
36 1na3_A Designed protein CTPR2; 72.4 15 0.00052 23.9 6.9 46 138-192 26-71 (91)
37 3k9i_A BH0479 protein; putativ 71.5 14 0.00047 26.2 6.9 47 138-193 44-90 (117)
38 3vtx_A MAMA; tetratricopeptide 71.0 12 0.00043 28.2 6.9 46 138-192 124-169 (184)
39 1hz4_A MALT regulatory protein 70.9 13 0.00046 31.6 7.8 55 138-193 110-164 (373)
40 2kck_A TPR repeat; tetratricop 70.1 18 0.0006 24.1 6.9 46 138-192 23-68 (112)
41 2xev_A YBGF; tetratricopeptide 69.3 22 0.00075 24.8 7.5 49 138-192 56-104 (129)
42 3ulq_A Response regulator aspa 68.7 13 0.00044 32.1 7.2 55 137-194 200-254 (383)
43 3gw4_A Uncharacterized protein 68.2 21 0.00071 27.0 7.7 56 137-195 123-178 (203)
44 4a1s_A PINS, partner of inscut 68.0 15 0.00051 31.5 7.4 52 138-194 65-116 (411)
45 2kc7_A BFR218_protein; tetratr 67.8 22 0.00075 23.8 7.0 47 138-192 17-63 (99)
46 2hr2_A Hypothetical protein; a 67.4 20 0.0007 28.7 7.6 54 138-193 28-86 (159)
47 2dba_A Smooth muscle cell asso 67.3 11 0.00039 26.8 5.7 50 138-193 45-94 (148)
48 3sf4_A G-protein-signaling mod 65.6 18 0.00062 30.5 7.4 52 138-194 26-77 (406)
49 3q15_A PSP28, response regulat 65.4 16 0.00056 31.5 7.2 54 138-194 199-252 (378)
50 2xev_A YBGF; tetratricopeptide 65.3 27 0.00091 24.3 7.3 50 138-193 19-68 (129)
51 3ro2_A PINS homolog, G-protein 64.6 16 0.00056 29.4 6.7 55 138-195 60-114 (338)
52 2vgx_A Chaperone SYCD; alterna 64.5 25 0.00085 26.4 7.4 47 138-193 72-118 (148)
53 3upv_A Heat shock protein STI1 64.3 24 0.00081 24.9 6.9 46 138-192 21-66 (126)
54 4gco_A Protein STI-1; structur 63.6 23 0.0008 25.8 6.9 46 138-192 64-109 (126)
55 3rkv_A Putative peptidylprolyl 62.7 36 0.0012 25.2 8.0 70 138-224 80-149 (162)
56 2lni_A Stress-induced-phosphop 62.5 28 0.00095 24.0 6.9 47 138-193 67-113 (133)
57 3q49_B STIP1 homology and U bo 61.6 28 0.00096 24.5 6.9 46 138-192 26-71 (137)
58 3ma5_A Tetratricopeptide repea 61.2 37 0.0013 23.3 9.8 72 138-224 24-95 (100)
59 3k9i_A BH0479 protein; putativ 61.0 11 0.00036 26.8 4.4 50 138-193 7-56 (117)
60 3sz7_A HSC70 cochaperone (SGT) 60.9 26 0.00088 26.1 6.8 15 177-191 92-106 (164)
61 1elr_A TPR2A-domain of HOP; HO 60.8 32 0.0011 23.5 6.9 49 138-195 21-69 (131)
62 3upv_A Heat shock protein STI1 60.1 31 0.0011 24.2 6.9 48 138-194 55-102 (126)
63 1qqe_A Vesicular transport pro 60.0 25 0.00085 29.4 7.2 53 138-193 54-106 (292)
64 3vtx_A MAMA; tetratricopeptide 59.4 28 0.00097 26.1 6.9 46 138-192 22-67 (184)
65 2kat_A Uncharacterized protein 58.7 41 0.0014 23.2 7.2 49 138-195 36-84 (115)
66 2xcb_A PCRH, regulatory protei 58.5 50 0.0017 24.0 9.1 48 138-194 69-116 (142)
67 4gfq_A Ribosome-recycling fact 58.3 26 0.0009 29.6 6.9 69 26-100 126-199 (209)
68 4g1t_A Interferon-induced prot 58.2 17 0.00057 31.9 6.0 49 138-191 351-399 (472)
69 1elw_A TPR1-domain of HOP; HOP 57.6 33 0.0011 22.9 6.4 46 138-192 55-100 (118)
70 3uq3_A Heat shock protein STI1 57.6 25 0.00087 27.3 6.5 53 138-192 55-107 (258)
71 3sz7_A HSC70 cochaperone (SGT) 56.9 34 0.0012 25.4 6.9 13 138-150 62-74 (164)
72 2vyi_A SGTA protein; chaperone 56.7 41 0.0014 22.7 6.9 46 138-192 29-74 (131)
73 3lf9_A 4E10_D0_1IS1A_001_C (T1 56.5 48 0.0016 25.6 7.5 34 23-56 27-60 (121)
74 2vyi_A SGTA protein; chaperone 56.3 42 0.0014 22.7 6.9 47 138-193 63-109 (131)
75 3sf4_A G-protein-signaling mod 56.2 35 0.0012 28.6 7.6 55 138-195 64-118 (406)
76 2vq2_A PILW, putative fimbrial 56.0 32 0.0011 26.1 6.7 48 138-192 94-141 (225)
77 1a17_A Serine/threonine protei 55.2 40 0.0014 24.3 6.9 47 138-193 64-110 (166)
78 1ihg_A Cyclophilin 40; ppiase 54.6 14 0.00046 33.0 4.8 54 138-192 240-301 (370)
79 2dba_A Smooth muscle cell asso 54.5 44 0.0015 23.5 6.9 46 138-192 82-127 (148)
80 1elw_A TPR1-domain of HOP; HOP 54.0 45 0.0015 22.1 6.9 47 138-193 21-67 (118)
81 3u4t_A TPR repeat-containing p 53.2 21 0.00073 28.4 5.4 53 139-192 197-249 (272)
82 2v5f_A Prolyl 4-hydroxylase su 53.2 56 0.0019 22.9 7.7 53 138-192 22-74 (104)
83 4ga2_A E3 SUMO-protein ligase 52.9 43 0.0015 24.9 6.9 46 138-192 48-93 (150)
84 3gyz_A Chaperone protein IPGC; 52.9 37 0.0013 26.0 6.6 46 138-192 87-132 (151)
85 1lyp_A CAP18; lipopolysacchari 52.8 31 0.0011 19.9 4.4 26 72-97 4-29 (32)
86 4a1s_A PINS, partner of inscut 52.6 52 0.0018 28.0 8.2 58 135-195 197-254 (411)
87 3hym_B Cell division cycle pro 52.2 42 0.0014 27.2 7.2 55 138-193 210-265 (330)
88 1kt0_A FKBP51, 51 kDa FK506-bi 52.2 35 0.0012 31.0 7.3 53 138-192 285-345 (457)
89 1dd5_A Ribosome recycling fact 51.9 41 0.0014 27.8 6.9 68 26-99 102-174 (185)
90 1a17_A Serine/threonine protei 51.2 49 0.0017 23.7 6.8 47 138-193 30-76 (166)
91 2fbn_A 70 kDa peptidylprolyl i 50.3 47 0.0016 25.5 6.9 49 138-192 55-116 (198)
92 2e2e_A Formate-dependent nitri 50.2 50 0.0017 24.6 6.9 46 138-192 98-143 (177)
93 1ise_A Ribosome recycling fact 49.8 43 0.0015 27.7 6.7 68 26-99 102-174 (185)
94 1na0_A Designed protein CTPR3; 49.7 55 0.0019 21.8 6.9 46 138-192 26-71 (125)
95 2ifu_A Gamma-SNAP; membrane fu 49.5 48 0.0016 27.8 7.3 53 137-193 131-184 (307)
96 1is1_A Ribosome recycling fact 48.7 45 0.0015 27.5 6.7 68 26-99 102-174 (185)
97 1eh1_A Ribosome recycling fact 48.5 43 0.0015 27.7 6.5 74 26-100 103-176 (185)
98 1hh8_A P67PHOX, NCF-2, neutrop 48.3 53 0.0018 25.0 6.9 46 138-192 54-99 (213)
99 2ho1_A Type 4 fimbrial biogene 48.2 39 0.0013 26.5 6.2 48 138-192 122-169 (252)
100 2fbn_A 70 kDa peptidylprolyl i 48.1 52 0.0018 25.2 6.8 46 138-192 105-150 (198)
101 1na0_A Designed protein CTPR3; 47.6 60 0.002 21.6 6.9 47 138-193 60-106 (125)
102 2lni_A Stress-induced-phosphop 47.6 29 0.00099 23.9 4.8 47 138-193 33-79 (133)
103 3urz_A Uncharacterized protein 47.5 53 0.0018 25.7 6.9 46 138-192 71-116 (208)
104 1wqg_A Ribosome recycling fact 47.4 48 0.0017 27.3 6.7 68 26-99 102-174 (185)
105 2pl2_A Hypothetical conserved 46.7 54 0.0019 25.8 6.9 48 137-193 100-147 (217)
106 1ge9_A Ribosome recycling fact 46.4 77 0.0026 26.1 7.8 71 26-100 104-174 (184)
107 2ooe_A Cleavage stimulation fa 46.3 23 0.00079 32.3 5.1 53 137-198 62-114 (530)
108 2g0u_A Type III secretion syst 45.5 22 0.00077 26.2 3.9 60 107-173 4-67 (92)
109 1p5q_A FKBP52, FK506-binding p 45.4 17 0.00059 31.4 3.9 53 138-192 164-224 (336)
110 3as5_A MAMA; tetratricopeptide 44.8 72 0.0025 23.0 6.9 47 138-193 93-139 (186)
111 1wao_1 Serine/threonine protei 44.4 47 0.0016 30.4 6.9 15 177-191 87-101 (477)
112 3gyz_A Chaperone protein IPGC; 43.7 70 0.0024 24.3 6.9 46 138-192 53-98 (151)
113 2xcb_A PCRH, regulatory protei 43.5 77 0.0026 22.9 6.9 46 138-192 35-80 (142)
114 1hz4_A MALT regulatory protein 43.1 47 0.0016 28.1 6.3 53 138-194 31-83 (373)
115 2ifu_A Gamma-SNAP; membrane fu 42.4 34 0.0012 28.7 5.3 53 138-194 93-145 (307)
116 1qqe_A Vesicular transport pro 42.3 71 0.0024 26.4 7.3 53 138-193 94-147 (292)
117 2c2l_A CHIP, carboxy terminus 41.8 45 0.0015 27.8 5.9 49 143-195 53-103 (281)
118 1hxi_A PEX5, peroxisome target 41.6 47 0.0016 23.8 5.3 46 138-192 68-113 (121)
119 1xnf_A Lipoprotein NLPI; TPR, 41.5 70 0.0024 25.1 6.8 46 138-192 94-139 (275)
120 2y4t_A DNAJ homolog subfamily 41.3 47 0.0016 28.6 6.1 50 138-192 274-323 (450)
121 3as5_A MAMA; tetratricopeptide 40.7 91 0.0031 22.4 6.9 47 138-193 59-105 (186)
122 1xnf_A Lipoprotein NLPI; TPR, 40.4 78 0.0027 24.8 6.9 47 138-193 60-106 (275)
123 2vgx_A Chaperone SYCD; alterna 39.9 91 0.0031 23.1 6.9 46 138-192 38-83 (148)
124 2ond_A Cleavage stimulation fa 38.9 52 0.0018 27.5 5.8 46 138-192 186-231 (308)
125 1hh8_A P67PHOX, NCF-2, neutrop 37.2 66 0.0023 24.4 5.8 53 138-191 88-148 (213)
126 4abn_A Tetratricopeptide repea 36.8 75 0.0026 28.8 6.9 50 137-192 237-286 (474)
127 4b4t_Q 26S proteasome regulato 36.8 1.2E+02 0.0041 25.9 8.0 54 138-194 112-165 (434)
128 1hxi_A PEX5, peroxisome target 36.6 1.1E+02 0.0038 21.6 6.8 46 138-192 34-79 (121)
129 2kat_A Uncharacterized protein 36.3 89 0.0031 21.4 6.0 45 140-193 4-48 (115)
130 3uq3_A Heat shock protein STI1 35.8 1E+02 0.0036 23.6 6.9 47 138-193 156-202 (258)
131 3ieg_A DNAJ homolog subfamily 35.4 80 0.0027 25.6 6.4 15 177-191 319-333 (359)
132 2e2e_A Formate-dependent nitri 35.3 1.1E+02 0.0037 22.6 6.7 48 138-193 61-110 (177)
133 2q7f_A YRRB protein; TPR, prot 35.1 1.1E+02 0.0038 23.3 6.9 15 177-191 138-152 (243)
134 2yhc_A BAMD, UPF0169 lipoprote 35.0 1.3E+02 0.0043 23.6 7.4 49 138-192 21-69 (225)
135 2fo7_A Synthetic consensus TPR 34.9 1E+02 0.0034 20.6 6.4 47 138-193 52-98 (136)
136 3qky_A Outer membrane assembly 34.6 1.4E+02 0.0046 23.8 7.6 50 137-192 113-176 (261)
137 4eqf_A PEX5-related protein; a 34.5 86 0.003 26.1 6.6 15 8-22 68-82 (365)
138 3ieg_A DNAJ homolog subfamily 33.7 86 0.0029 25.4 6.3 50 138-193 251-301 (359)
139 3q49_B STIP1 homology and U bo 33.6 1.2E+02 0.004 21.0 9.8 50 138-196 60-109 (137)
140 3qky_A Outer membrane assembly 33.5 1E+02 0.0035 24.5 6.6 50 138-193 32-81 (261)
141 4i17_A Hypothetical protein; T 33.4 1.1E+02 0.0036 23.7 6.6 46 138-191 24-69 (228)
142 4i17_A Hypothetical protein; T 33.3 93 0.0032 24.1 6.2 46 138-192 59-104 (228)
143 1zu2_A Mitochondrial import re 33.1 62 0.0021 25.8 5.1 95 117-225 42-143 (158)
144 1p5q_A FKBP52, FK506-binding p 31.7 1.1E+02 0.0038 26.2 6.9 46 138-192 213-258 (336)
145 3u64_A Protein TP_0956; tetrat 31.5 45 0.0015 29.7 4.3 62 118-192 206-268 (301)
146 2xpi_A Anaphase-promoting comp 31.4 1.5E+02 0.0052 26.5 8.0 55 137-193 491-545 (597)
147 2ond_A Cleavage stimulation fa 31.2 94 0.0032 25.8 6.2 48 137-192 150-197 (308)
148 3eab_A Spastin; spastin, MIT, 30.9 1.5E+02 0.0053 21.5 7.5 68 138-222 7-80 (89)
149 2wb7_A PT26-6P; extra chromoso 30.7 1.5E+02 0.0052 28.3 7.9 54 124-179 435-489 (526)
150 4ga2_A E3 SUMO-protein ligase 30.5 59 0.002 24.1 4.4 48 137-193 13-60 (150)
151 4eqf_A PEX5-related protein; a 30.3 1.3E+02 0.0043 25.1 6.9 48 137-193 115-162 (365)
152 1fch_A Peroxisomal targeting s 30.1 83 0.0028 26.0 5.6 59 137-196 301-362 (368)
153 1fch_A Peroxisomal targeting s 29.8 1.3E+02 0.0045 24.7 6.9 46 138-192 234-279 (368)
154 2ho1_A Type 4 fimbrial biogene 29.8 1E+02 0.0034 24.0 5.9 46 138-192 88-133 (252)
155 4gyw_A UDP-N-acetylglucosamine 29.3 1E+02 0.0035 30.2 6.9 46 138-192 94-139 (723)
156 4b4t_Q 26S proteasome regulato 29.3 2E+02 0.007 24.4 8.2 56 138-195 192-247 (434)
157 4gyw_A UDP-N-acetylglucosamine 28.6 1.1E+02 0.0037 30.0 6.9 13 138-150 26-38 (723)
158 1wao_1 Serine/threonine protei 28.5 96 0.0033 28.3 6.2 14 177-190 53-66 (477)
159 2if4_A ATFKBP42; FKBP-like, al 28.3 48 0.0016 28.6 3.9 49 138-192 196-258 (338)
160 2q7f_A YRRB protein; TPR, prot 28.3 1.3E+02 0.0044 22.9 6.2 15 8-22 26-40 (243)
161 2vq2_A PILW, putative fimbrial 27.6 1.8E+02 0.0061 21.6 6.8 47 138-193 130-176 (225)
162 2fo7_A Synthetic consensus TPR 27.3 1.4E+02 0.0047 19.8 6.4 46 138-192 86-131 (136)
163 2gw1_A Mitochondrial precursor 26.6 1.6E+02 0.0056 25.4 7.2 56 137-193 205-266 (514)
164 3cv0_A Peroxisome targeting si 25.1 1.9E+02 0.0065 23.0 6.9 46 138-192 189-234 (327)
165 3cv0_A Peroxisome targeting si 24.9 1.9E+02 0.0066 23.0 6.9 48 138-194 223-270 (327)
166 3fp2_A TPR repeat-containing p 24.6 2E+02 0.0068 25.1 7.4 55 139-193 213-272 (537)
167 3fp2_A TPR repeat-containing p 24.2 3.5E+02 0.012 23.4 13.4 49 137-194 444-492 (537)
168 1ya0_A SMG-7 transcript varian 24.1 28 0.00096 33.0 1.6 44 117-175 158-210 (497)
169 2ooe_A Cleavage stimulation fa 23.9 1.8E+02 0.0061 26.1 7.1 21 172-192 399-419 (530)
170 3u4t_A TPR repeat-containing p 23.8 1.8E+02 0.0062 22.6 6.4 49 138-192 54-102 (272)
171 2c2l_A CHIP, carboxy terminus 22.9 1.1E+02 0.0038 25.2 5.2 13 178-190 52-64 (281)
172 3urz_A Uncharacterized protein 21.8 2.3E+02 0.0077 21.9 6.6 55 138-193 21-83 (208)
173 4abn_A Tetratricopeptide repea 21.8 1.6E+02 0.0056 26.4 6.4 46 138-192 120-165 (474)
174 3mkr_A Coatomer subunit epsilo 21.1 2.3E+02 0.008 23.4 6.9 46 138-192 183-228 (291)
175 3hym_B Cell division cycle pro 20.6 3E+02 0.01 21.8 7.3 29 165-194 195-223 (330)
176 2pl2_A Hypothetical conserved 20.4 1.6E+02 0.0056 22.9 5.5 46 138-192 56-112 (217)
177 2vsy_A XCC0866; transferase, g 20.1 2.2E+02 0.0074 25.9 6.9 46 138-192 74-119 (568)
178 4h7y_A Dual specificity protei 20.1 98 0.0033 25.1 3.9 51 135-191 33-87 (161)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=3.4e-93 Score=630.49 Aligned_cols=230 Identities=63% Similarity=1.009 Sum_probs=214.4
Q ss_pred CCchHHhHHHHHHHHHHhcccc---------ccCCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcchhHH
Q 025713 1 MDKDRENFVYIAKLAEQAERYD---------ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNV 71 (249)
Q Consensus 1 m~~~re~li~~Aklaeq~eRy~---------v~~~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~ 71 (249)
|+ +|++++|+||||+|||||| ++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.++
T Consensus 1 m~-~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~ 79 (248)
T 3uzd_A 1 MV-DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKI 79 (248)
T ss_dssp -C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-H
T ss_pred CC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHH
Confidence 55 7999999999999999999 4789999999999999999999999999999999999999877888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC--cchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHH
Q 025713 72 KRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGG--ESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAAST 149 (249)
Q Consensus 72 ~~i~~yk~ki~~EL~~~C~eii~lid~~Llp~~~~~--eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~ 149 (249)
+.+++||++|++||..+|++||++||++|||.++++ |+||||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 80 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~ 159 (248)
T 3uzd_A 80 EMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHE 159 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhccCCCC
Q 025713 150 TAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE 229 (249)
Q Consensus 150 ~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqlLrdNl~~W~~e~~~ 229 (249)
+|+.+||||||||||||||||||||||+|+|++||.||++|||+||++||+|++++|+|+|+||||||||||+|+++.++
T Consensus 160 iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~ 239 (248)
T 3uzd_A 160 ISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQD 239 (248)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcc
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999999776
Q ss_pred CC
Q 025713 230 DG 231 (249)
Q Consensus 230 ~~ 231 (249)
++
T Consensus 240 ~~ 241 (248)
T 3uzd_A 240 DD 241 (248)
T ss_dssp --
T ss_pred cc
Confidence 66
No 2
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=4.6e-92 Score=619.74 Aligned_cols=222 Identities=60% Similarity=0.930 Sum_probs=217.4
Q ss_pred chHHhHHHHHHHHHHhcccc---------ccCCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcchhHHHH
Q 025713 3 KDRENFVYIAKLAEQAERYD---------ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKR 73 (249)
Q Consensus 3 ~~re~li~~Aklaeq~eRy~---------v~~~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~ 73 (249)
.+|++++|+||||||||||| ++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.
T Consensus 6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~~ 85 (236)
T 3iqu_A 6 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPE 85 (236)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCSH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHHH
Confidence 47999999999999999999 477999999999999999999999999999999999999988888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHh
Q 025713 74 IKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEA 153 (249)
Q Consensus 74 i~~yk~ki~~EL~~~C~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~ 153 (249)
+++||++|++||..+|++||++||++|||+++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|++
T Consensus 86 i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~ 165 (236)
T 3iqu_A 86 VREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKK 165 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhc
Q 025713 154 ELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWT 224 (249)
Q Consensus 154 ~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqlLrdNl~~W~ 224 (249)
+||||||||||||||||||||||+|+|++||.|||+|||+||+++|+|+|++|+|+|+||||||||||+||
T Consensus 166 ~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 166 EMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.5e-91 Score=621.13 Aligned_cols=223 Identities=77% Similarity=1.146 Sum_probs=217.7
Q ss_pred hHHhHHHHHHHHHHhcccc---------ccCCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcchhHHHHH
Q 025713 4 DRENFVYIAKLAEQAERYD---------ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRI 74 (249)
Q Consensus 4 ~re~li~~Aklaeq~eRy~---------v~~~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i 74 (249)
+|++++|+||||||||||| ++.+++||.||||||||||||+||++|+|||+|+++||+++.+|++.+++.+
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~~~i 109 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 109 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHHHHH
Confidence 7999999999999999999 4789999999999999999999999999999999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhc
Q 025713 75 KEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAE 154 (249)
Q Consensus 75 ~~yk~ki~~EL~~~C~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 154 (249)
++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|+++
T Consensus 110 ~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~ 189 (261)
T 3ubw_A 110 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhccC
Q 025713 155 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 226 (249)
Q Consensus 155 L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqlLrdNl~~W~~e 226 (249)
||||||||||||||||||||||+|+|++||.|||+|||+||++||+|+|++|+|||+||||||||||+|+++
T Consensus 190 L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 190 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=6.3e-91 Score=620.48 Aligned_cols=233 Identities=73% Similarity=1.105 Sum_probs=214.0
Q ss_pred CchHHhHHHHHHHHHHhcccc---------ccCC--CCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcchhH
Q 025713 2 DKDRENFVYIAKLAEQAERYD---------ANLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELN 70 (249)
Q Consensus 2 ~~~re~li~~Aklaeq~eRy~---------v~~~--~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~~~~ 70 (249)
+++|++++|+|||++|||||+ ++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+
T Consensus 5 ~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~~ 84 (260)
T 1o9d_A 5 PTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEH 84 (260)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHHH
Confidence 368999999999999999999 4667 89999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHH
Q 025713 71 VKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTT 150 (249)
Q Consensus 71 ~~~i~~yk~ki~~EL~~~C~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~ 150 (249)
++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 85 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 164 (260)
T 1o9d_A 85 VNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 164 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhccCCCCC
Q 025713 151 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPED 230 (249)
Q Consensus 151 a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqlLrdNl~~W~~e~~~~ 230 (249)
|+.+||||||||||||||||||||||+|+|++||.||++|||+||+++|+|+|++|+|+|+||||||||||+|+++.+++
T Consensus 165 A~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~~ 244 (260)
T 1o9d_A 165 ATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 244 (260)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-----
T ss_pred HHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCcc
Confidence 99899999999999999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred CCch
Q 025713 231 GGDE 234 (249)
Q Consensus 231 ~~~~ 234 (249)
+++.
T Consensus 245 ~~~~ 248 (260)
T 1o9d_A 245 GADE 248 (260)
T ss_dssp ----
T ss_pred cccc
Confidence 6654
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=1.7e-89 Score=604.02 Aligned_cols=222 Identities=77% Similarity=1.144 Sum_probs=217.0
Q ss_pred hHHhHHHHHHHHHHhcccc---------ccCCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcchhHHHHH
Q 025713 4 DRENFVYIAKLAEQAERYD---------ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRI 74 (249)
Q Consensus 4 ~re~li~~Aklaeq~eRy~---------v~~~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i 74 (249)
+|++++|+||||+|||||+ ++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 4 ~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~~i 83 (234)
T 2br9_A 4 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 83 (234)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHHHH
Confidence 6999999999999999999 4778999999999999999999999999999999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhc
Q 025713 75 KEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAE 154 (249)
Q Consensus 75 ~~yk~ki~~EL~~~C~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 154 (249)
++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++|+.+
T Consensus 84 ~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 163 (234)
T 2br9_A 84 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 163 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhcc
Q 025713 155 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 225 (249)
Q Consensus 155 L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqlLrdNl~~W~~ 225 (249)
||||||||||||||||||||||+|+|++||.|||+|||+|++++|+|+|++|+|+|+||||||||||+|++
T Consensus 164 L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 164 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=1.4e-88 Score=604.91 Aligned_cols=223 Identities=63% Similarity=0.982 Sum_probs=215.9
Q ss_pred chHHhHHHHHHHHHHhcccc---------ccCC---CCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcchhH
Q 025713 3 KDRENFVYIAKLAEQAERYD---------ANLD---VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELN 70 (249)
Q Consensus 3 ~~re~li~~Aklaeq~eRy~---------v~~~---~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~~~~ 70 (249)
++|++++|+|||++|||||+ ++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~ 105 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDA 105 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHH
Confidence 46999999999999999999 3667 89999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHH
Q 025713 71 VKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTT 150 (249)
Q Consensus 71 ~~~i~~yk~ki~~EL~~~C~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~ 150 (249)
++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 106 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 185 (260)
T 2npm_A 106 SKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVV 185 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhccC
Q 025713 151 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 226 (249)
Q Consensus 151 a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqlLrdNl~~W~~e 226 (249)
| .+||||||||||||||||||||||+|++++||.|||+|||+|++++|+|+|++|+|+|+||||||||||+|+++
T Consensus 186 A-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 186 A-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp H-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred H-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 9 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=2e-86 Score=591.18 Aligned_cols=221 Identities=24% Similarity=0.412 Sum_probs=190.1
Q ss_pred hHHhHHHHHHHHHHhcccc------ccCCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhH-hhhcc-hhHHHHHH
Q 025713 4 DRENFVYIAKLAEQAERYD------ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EARGN-ELNVKRIK 75 (249)
Q Consensus 4 ~re~li~~Aklaeq~eRy~------v~~~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~-~~~~~-~~~~~~i~ 75 (249)
+|++++|+||||||||||| ++.+++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.+++.++
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~~~i~ 107 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVLTESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQVIE 107 (268)
T ss_dssp ------------------CHHHHHHTC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHHHHHH
Confidence 5999999999999999999 5779999999999999999999999999999999999999 67777 88999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhcC
Q 025713 76 EYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAEL 155 (249)
Q Consensus 76 ~yk~ki~~EL~~~C~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 155 (249)
+||++|++||..+|++||++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|+++|+++|
T Consensus 108 ~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L 186 (268)
T 3efz_A 108 DIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFL 186 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999899
Q ss_pred --CCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhccCCcccHHhHHHHHHHHHhhHhhhccCCCC
Q 025713 156 --SPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE---AISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE 229 (249)
Q Consensus 156 --~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~---Ai~~ld~l~ee~y~ds~~ilqlLrdNl~~W~~e~~~ 229 (249)
|||||||||||||||||||||+|+|++||.|||+|||+ ||+++|+|+|++ |+||||||||||+|+++.++
T Consensus 187 ~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWtsd~~~ 261 (268)
T 3efz_A 187 EKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQGCSG 261 (268)
T ss_dssp TTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTTTCCT
T ss_pred CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhccccc
Confidence 99999999999999999999999999999999999999 999999999987 99999999999999998654
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=2.6e-77 Score=522.18 Aligned_cols=206 Identities=21% Similarity=0.218 Sum_probs=189.4
Q ss_pred hHHhHH---HHHHHHHHhcccc---------cc----CCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcc
Q 025713 4 DRENFV---YIAKLAEQAERYD---------AN----LDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGN 67 (249)
Q Consensus 4 ~re~li---~~Aklaeq~eRy~---------v~----~~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~ 67 (249)
+|++++ |+||||+|||||| ++ .+++||.||||||||||||+||++|+|||+|+++||++ +|+
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 589999 9999999999999 46 78999999999999999999999999999999999998 677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHH
Q 025713 68 ELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAA 147 (249)
Q Consensus 68 ~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A 147 (249)
+.+++.+++||++|++||..+|++|+++||++|||++ |+||||+|||||||||+|||..|+ +++|+++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 8899999999999999999999999999999999998 999999999999999999999998 89999999999
Q ss_pred HHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH---HHhhccCCcccHHhHHHHHHHHHhhHh
Q 025713 148 STTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA---ISELDTLSEESYKDSTLIMQLLRDNLT 221 (249)
Q Consensus 148 ~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A---i~~ld~l~ee~y~ds~~ilqlLrdNl~ 221 (249)
+++|+++|||||||||||+||||||||||+|+|++||.+|++||+.+ +..-+.++ .++++|+|+|+|||||.
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m~--~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENMD--RKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHC----
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccch--hHHHHHHHHHHHHHhcc
Confidence 99999899999999999999999999999999999999999999976 44444333 47889999999999984
No 9
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=92.90 E-value=0.52 Score=44.71 Aligned_cols=58 Identities=3% Similarity=-0.111 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 196 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~ 196 (249)
+.|...|++|+++-...|+|.||.-+....|.++.|+. .|+.++|..+.++|+.--..
T Consensus 368 ~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 368 EEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 56999999999999999999999999999999998777 69999999999999765443
No 10
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.47 E-value=0.64 Score=43.13 Aligned_cols=59 Identities=12% Similarity=0.033 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISE 197 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ 197 (249)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--...
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHh
Confidence 67999999999999989999999999999999998777 799999999999987755433
No 11
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.50 E-value=0.87 Score=42.45 Aligned_cols=59 Identities=10% Similarity=-0.005 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISE 197 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ 197 (249)
+.|...|++|+++-+..++|.||--.....|.++-|+. .|+.++|..+-++|+.=-...
T Consensus 357 ~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 357 EGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999888888888666 799999999999987765543
No 12
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.94 E-value=0.44 Score=44.47 Aligned_cols=59 Identities=7% Similarity=-0.004 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISE 197 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ 197 (249)
+.|...|++|+++.+..|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--...
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 373 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKH 373 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHH
Confidence 45788999999999889999999999888888877666 799999999999997665443
No 13
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=90.13 E-value=0.55 Score=44.49 Aligned_cols=58 Identities=19% Similarity=0.124 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 196 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~ 196 (249)
+.|...|++|+++....|.|.||..+...-|.+..|.. +|+.++|..+.++|++--..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Confidence 35677899999999889999999999999998888766 69999999999999776443
No 14
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=90.05 E-value=0.57 Score=37.75 Aligned_cols=56 Identities=14% Similarity=0.058 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+.+++...+|.||.......|.+..++. +|+.++|+...+++++-.
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 67999999999999888888899888888888887666 799999999999998774
No 15
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=89.53 E-value=0.85 Score=38.55 Aligned_cols=57 Identities=11% Similarity=0.111 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 196 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~ 196 (249)
++|...|++|+++++ .++..+|....+..|.+..|+. +|+.++|+...++|++-+..
T Consensus 172 ~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 172 KKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 679999999999985 4666777777788899988877 69999999999999877643
No 16
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=88.90 E-value=1.4 Score=35.37 Aligned_cols=58 Identities=19% Similarity=0.161 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 196 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~ 196 (249)
+.|...|++|+.+++...++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 144 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 144 EEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 67999999999999888888899888888888877666 69999999999999876543
No 17
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=87.44 E-value=0.58 Score=43.42 Aligned_cols=58 Identities=10% Similarity=0.013 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 196 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~ 196 (249)
+.|...|++|+++....|+|.||..+...-|-+.-|.. +|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45667777777776678999999999998888887665 79999999999998765443
No 18
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=87.38 E-value=1.8 Score=32.09 Aligned_cols=48 Identities=15% Similarity=0.236 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.-.
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 6799999999865 45554 345677777666 799999999988887643
No 19
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=87.12 E-value=2.3 Score=36.99 Aligned_cols=151 Identities=14% Similarity=0.082 Sum_probs=82.1
Q ss_pred CCHH-HHHHHHHHHHhhhhhh-hHHHHHHHhHHhhHhhh-cchhHH--HHHHHHHHHHHHHHHHHHH-----------HH
Q 025713 29 LTVE-ERNLLSVGYKNVIGAR-RASWRILSSIEQKEEAR-GNELNV--KRIKEYRQKVEAELSKIST-----------DI 92 (249)
Q Consensus 29 Ls~E-ERnLlSvAyKn~i~~~-R~s~R~l~~ieq~~~~~-~~~~~~--~~i~~yk~ki~~EL~~~C~-----------ei 92 (249)
++.+ -.++|.-.|+.+.... -.|-..+..+++....- .+.... -.+-.+|..+..+=..... +.
T Consensus 7 ~~~~~v~~~l~~w~~~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~~ 86 (383)
T 3ulq_A 7 ISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDL 86 (383)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHhhcCcccccccccccchhhH
Confidence 4444 4778888888776654 44555555565554321 111111 1122344444333333333 44
Q ss_pred HHHHHhccCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHH
Q 025713 93 MQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVF 172 (249)
Q Consensus 93 i~lid~~Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF 172 (249)
++-|+. .|...+.-...+|+-.+|.+|...-. -+.|...|++|+.++.. + .+|...+.+++.--.
T Consensus 87 ~~~i~~--~~~~~~~~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~a~~~~~lg~ 151 (383)
T 3ulq_A 87 LLEIDK--KQARLTGLLEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V--KDRIEKAEFFFKMSE 151 (383)
T ss_dssp HHHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C--CCHHHHHHHHHHHHH
T ss_pred HHHHHh--cCCCchhHHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C--CCHHHHHHHHHHHHH
Confidence 555543 12211222334555566766643322 36689999999998853 3 234444544444444
Q ss_pred HHHHhCChHHHHHHHHHHHHHH
Q 025713 173 YYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 173 ~yei~~~~~~A~~iak~afd~A 194 (249)
.|..+|+.++|+...++|++-.
T Consensus 152 ~~~~~~~~~~A~~~~~~al~~~ 173 (383)
T 3ulq_A 152 SYYYMKQTYFSMDYARQAYEIY 173 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHH
Confidence 4555899999999998887754
No 20
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=86.08 E-value=2.6 Score=34.45 Aligned_cols=59 Identities=20% Similarity=0.170 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 196 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~ 196 (249)
.+.|...|++|+.++....++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 169 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 169 YEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 367999999999999877788888888778888877666 69999999999999876543
No 21
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=82.43 E-value=2.1 Score=32.48 Aligned_cols=54 Identities=19% Similarity=0.273 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHhcC---CCC-------CcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAEL---SPT-------HPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L---~pt-------~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+..... .|+ +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 679999999999874321 233 56777888888888766 6999999999888854
No 22
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=81.43 E-value=5.1 Score=28.72 Aligned_cols=55 Identities=15% Similarity=-0.062 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
+.|...|++|++++.. ..+|..++.+++.-...|-.+|+.++|+...++|++-+-
T Consensus 26 ~~A~~~~~~al~~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 26 RDAVIAHEQRLLIAKE---FGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHH---HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---hCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 6788999999999864 234455555555555555568999999999888877653
No 23
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=81.19 E-value=2.9 Score=34.12 Aligned_cols=57 Identities=14% Similarity=0.032 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
+.|...|++|+++.....++.+|.......+.+..++. .|+.++|+...+++++...
T Consensus 128 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~ 184 (311)
T 3nf1_A 128 KEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN-QGKYEEVEYYYQRALEIYQ 184 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 67899999999999777777778777777777776655 7999999999999887643
No 24
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=81.11 E-value=9.6 Score=26.29 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 678999999998874 3455555445566677766655 7999999887777665
No 25
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=80.58 E-value=7.2 Score=27.85 Aligned_cols=55 Identities=13% Similarity=0.160 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
+.|...|++|+.++.. .+ .+|.......|.+..++ ..|+.++|+...++|++-+.
T Consensus 66 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQ-LK-DRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC-CcHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHH
Confidence 6789999999999864 22 22333344455555544 57999999999998887654
No 26
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=80.01 E-value=4.1 Score=35.47 Aligned_cols=148 Identities=13% Similarity=0.108 Sum_probs=76.5
Q ss_pred HHHHHHHHHHhhhhhh-hHHHHHHHhHHhhHhhhcchhHH---HHHHHHHHHHHHHHHHHHH---------HHHHHHHhc
Q 025713 33 ERNLLSVGYKNVIGAR-RASWRILSSIEQKEEARGNELNV---KRIKEYRQKVEAELSKIST---------DIMQVIDEH 99 (249)
Q Consensus 33 ERnLlSvAyKn~i~~~-R~s~R~l~~ieq~~~~~~~~~~~---~~i~~yk~ki~~EL~~~C~---------eii~lid~~ 99 (249)
--++|---|+.+.... -.|.+.+..+++..+.-..+..+ -.+-.+|..+-.+-..... +.++.|+..
T Consensus 12 v~~~l~~wy~~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 91 (378)
T 3q15_A 12 VGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELLETIETP 91 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGBCCCHHHHHHHHHHHHHHHHHHHTCCC--------CHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcCcccccccccchHHHHHHHhcc
Confidence 3455655666555444 34444444555543321111111 1222344444333222333 444445432
Q ss_pred cCCCCCCCcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCC
Q 025713 100 LIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNS 179 (249)
Q Consensus 100 Llp~~~~~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~ 179 (249)
+...++....+|+-.+|.+|...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+ .+|+
T Consensus 92 --~~~~~~~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~-~~~~ 156 (378)
T 3q15_A 92 --QKKLTGLLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYY-HMKQ 156 (378)
T ss_dssp --GHHHHHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHH-HTTC
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHH-HcCC
Confidence 1111222344555566766544322 26699999999998853 33 33444444455555555 5799
Q ss_pred hHHHHHHHHHHHHHHH
Q 025713 180 PERACHLAKQAFDEAI 195 (249)
Q Consensus 180 ~~~A~~iak~afd~Ai 195 (249)
.++|+...++|++-.-
T Consensus 157 ~~~A~~~~~~al~~~~ 172 (378)
T 3q15_A 157 THVSMYHILQALDIYQ 172 (378)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH
Confidence 9999999998877554
No 27
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=79.81 E-value=5.8 Score=29.26 Aligned_cols=46 Identities=17% Similarity=0.169 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|.++|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 6688999998854 34554 455666666655 7999999988877764
No 28
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=78.05 E-value=5.2 Score=33.55 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+++++. .|....+...+..|.+..|+. +|+.++|+...++|+.-+
T Consensus 172 ~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 172 KKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 6799999999999853 443222223566677776665 799999999999998765
No 29
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=77.00 E-value=7.7 Score=31.48 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+++ .|.+|..++.+++.-...|-..|++++|+...++|+.-+
T Consensus 22 ~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 22 RAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 5688888888865 567777666555555555666899999999988887654
No 30
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=76.52 E-value=7.5 Score=28.50 Aligned_cols=53 Identities=8% Similarity=-0.008 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+++.. ..++.++.+-....|.+.. |.-+|+.++|+..-++|+.
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~-~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNA-FQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHh
Confidence 678999999999874 3555554433344455554 5568999999986665543
No 31
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=75.99 E-value=6.1 Score=34.85 Aligned_cols=54 Identities=13% Similarity=0.128 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAE-LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~-L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|.++|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|...-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 67999999999998653 345677777777788877666 7999999877666543
No 32
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=75.93 E-value=8.3 Score=32.25 Aligned_cols=54 Identities=9% Similarity=0.000 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+.+. .+..++.....++|.--..|.-+|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~---~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQ---LTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTC---CCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---cccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 66899999999754 2233343434334444444455899999999999988644
No 33
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=74.96 E-value=9.7 Score=28.96 Aligned_cols=55 Identities=9% Similarity=-0.000 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+.+++ ..+ .+|...+.+++.-...|-.+|++++|+...++|+.-+
T Consensus 83 ~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 83 DAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 568999999999996 343 3454555555555555555899999999999988654
No 34
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=74.41 E-value=13 Score=30.97 Aligned_cols=64 Identities=16% Similarity=0.069 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYK 207 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ 207 (249)
+.|...|++|++++.. ..++..++.+++.--..|.-+|+.++|+. ..|+.|+.-.+.++...++
T Consensus 213 ~~Al~~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~---~~~~~Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 213 EESLYQVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIE---DAYKKASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHH---HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHH---HHHHHHHHHHHHhCcHhhH
Confidence 6799999999999853 23445566666555566777899999942 2344444444455555553
No 35
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=74.04 E-value=11 Score=25.54 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 191 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~af 191 (249)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5688899998865 34454 344566665554 799999988777665
No 36
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=72.45 E-value=15 Score=23.86 Aligned_cols=46 Identities=22% Similarity=0.335 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 5688888888865 34443 344566665554 7999999988777765
No 37
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=71.54 E-value=14 Score=26.15 Aligned_cols=47 Identities=15% Similarity=0.257 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 6688888888755 3455 3455666766555 79999999988888764
No 38
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=70.96 E-value=12 Score=28.20 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|.+.|++|+++ .|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 124 ~~A~~~~~~~l~~-----~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 124 DKAIEAYEKTISI-----KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHh-----cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 6788899988865 34554 34445555544 48999999988777764
No 39
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=70.86 E-value=13 Score=31.64 Aligned_cols=55 Identities=9% Similarity=0.018 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|....++++.-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 56889999999998754444456655556667766666 59999999888887754
No 40
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=70.14 E-value=18 Score=24.14 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+. |.+ .....+.+..++. +|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQLD-----PEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 56888888887652 333 3445666666665 6999999888777664
No 41
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=69.32 E-value=22 Score=24.82 Aligned_cols=49 Identities=18% Similarity=0.203 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+..-++++.
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888753 46776655556666666554 7999999987766654
No 42
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=68.65 E-value=13 Score=32.09 Aligned_cols=55 Identities=24% Similarity=0.169 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
-+.|...|++|++++... .+|..++.+++.--..|.-+|+.++|+...++|++-+
T Consensus 200 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 254 (383)
T 3ulq_A 200 YEDAISHFQKAYSMAEAE---KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVF 254 (383)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc---CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 367999999999999643 3344555454444445556899999999999888743
No 43
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=68.17 E-value=21 Score=27.00 Aligned_cols=56 Identities=11% Similarity=-0.094 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
.+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...++|++-+-
T Consensus 123 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 123 LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 35789999999999853 2 34555566665556666678999999988888777654
No 44
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=68.02 E-value=15 Score=31.54 Aligned_cols=52 Identities=15% Similarity=0.067 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+++ .|.+|..++.+++.-...|..+|+.++|+...++|+.-+
T Consensus 65 ~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (411)
T 4a1s_A 65 RAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLA 116 (411)
T ss_dssp HHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5688888888875 567777666555555555556899999999988887764
No 45
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=67.75 E-value=22 Score=23.83 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++|+.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 5677888877654 4455421 45666666555 7999999887777664
No 46
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=67.37 E-value=20 Score=28.70 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhh-----hhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLG-----LALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLg-----LaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|..+|++|+++.-. .|+..++.+. +..|-+.-+.. +|+.++|+..+.+|+.-
T Consensus 28 eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 28 DEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 6799999999998743 3333343333 56666655544 79999999988877653
No 47
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.28 E-value=11 Score=26.78 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+. +.|.+|....+..+.+..++. +|+.++|+...++++..
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhh
Confidence 456777777753 455655556666677766555 68888888887777653
No 48
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=65.57 E-value=18 Score=30.48 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+.+ .|.+|..++.+++.-...|...|+.++|+...++|+.-+
T Consensus 26 ~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 26 RAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 5688888888865 566776655444444444555799999999888876654
No 49
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=65.45 E-value=16 Score=31.50 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|.+.|++|+++++. .+ +|..++.+++.--..|.-+|+.++|+...++|++-+
T Consensus 199 ~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~ 252 (378)
T 3q15_A 199 DKALPHLEAALELAMD-IQ--NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVS 252 (378)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 6789999999999854 32 334555555444445555899999999988887743
No 50
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=65.35 E-value=27 Score=24.34 Aligned_cols=50 Identities=12% Similarity=0.047 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...++++..
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Confidence 556777777654 356778655566666666555 79999999988877653
No 51
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=64.62 E-value=16 Score=29.44 Aligned_cols=55 Identities=9% Similarity=-0.090 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
+.|...|++|+.++... +.+|. ...+++.-...|..+|+.++|+...++|+.-+-
T Consensus 60 ~~A~~~~~~al~~~~~~--~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 60 AKALEYHHHDLTLARTI--GDQLG-EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISR 114 (338)
T ss_dssp HHHHHHHHHHHHHHHHH--TCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcc--cccHH-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 67899999999998643 23343 344444444445568999999999888877654
No 52
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=64.54 E-value=25 Score=26.36 Aligned_cols=47 Identities=13% Similarity=0.065 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|..+|++|+.+ .|.||. ..+|.++.|+. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 6689999999765 456653 34566666555 79999998876666543
No 53
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=64.29 E-value=24 Score=24.87 Aligned_cols=46 Identities=17% Similarity=0.091 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4567777777654 23433 344444544444 6777777777766654
No 54
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=63.64 E-value=23 Score=25.77 Aligned_cols=46 Identities=7% Similarity=-0.018 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+++ .|.+| ....|.+..++ .+|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~-~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLV-AMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHH-HCCCHHHHHHHHHHHHH
Confidence 5688899999865 45554 34455555554 47999999887666654
No 55
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=62.74 E-value=36 Score=25.21 Aligned_cols=70 Identities=6% Similarity=-0.104 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLR 217 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqlLr 217 (249)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 5677888888765 45554 344555555444 79999998877666543 2222223455555555
Q ss_pred hhHhhhc
Q 025713 218 DNLTLWT 224 (249)
Q Consensus 218 dNl~~W~ 224 (249)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5555443
No 56
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=62.46 E-value=28 Score=24.00 Aligned_cols=47 Identities=17% Similarity=0.124 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALE-AMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHH-HHhhHHHHHHHHHHHHHh
Confidence 5688888888865 33443 34455555544 479999999887777653
No 57
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=61.57 E-value=28 Score=24.50 Aligned_cols=46 Identities=24% Similarity=0.308 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++.
T Consensus 26 ~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 71 (137)
T 3q49_B 26 PEAAACYGRAITR-----NPLVA---VYYTNRALCYLK-MQQPEQALADCRRALE 71 (137)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CcCcH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 3455555555543 22222 233333333332 5666666655555543
No 58
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=61.25 E-value=37 Score=23.33 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLR 217 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~ilqlLr 217 (249)
+.|...|++|+++ .|.+|. ...+.+..| ..+|+.++|+...++|+.-+-.. ....-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~-~~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLY-ERLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHH-HHcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHHH
Confidence 6688888888865 344443 445555554 45899999999888887765322 12333556666666
Q ss_pred hhHhhhc
Q 025713 218 DNLTLWT 224 (249)
Q Consensus 218 dNl~~W~ 224 (249)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 6555554
No 59
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=61.05 E-value=11 Score=26.82 Aligned_cols=50 Identities=8% Similarity=0.023 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 347788888875 334467777777788877766 79999999998888654
No 60
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=60.92 E-value=26 Score=26.13 Aligned_cols=15 Identities=13% Similarity=0.056 Sum_probs=7.2
Q ss_pred hCChHHHHHHHHHHH
Q 025713 177 MNSPERACHLAKQAF 191 (249)
Q Consensus 177 ~~~~~~A~~iak~af 191 (249)
+|+.++|+...++++
T Consensus 92 ~g~~~~A~~~~~~al 106 (164)
T 3sz7_A 92 MADYKGAKEAYEKGI 106 (164)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHH
Confidence 455555554444443
No 61
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=60.82 E-value=32 Score=23.45 Aligned_cols=49 Identities=22% Similarity=0.353 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
+.|...|++|+... |.+| .+..+.+..++. +|+.++|+...++++...-
T Consensus 21 ~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 21 DTALKHYDKAKELD-----PTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-----CccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 56888888887652 3443 344566665555 7999999999888877653
No 62
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=60.09 E-value=31 Score=24.20 Aligned_cols=48 Identities=8% Similarity=-0.020 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5688899998865 34443 344555555444 799999999888887654
No 63
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=59.99 E-value=25 Score=29.37 Aligned_cols=53 Identities=9% Similarity=0.030 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 6799999999999853 32 55556666666666677789999999988888654
No 64
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=59.42 E-value=28 Score=26.09 Aligned_cols=46 Identities=20% Similarity=0.258 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|..+|++|+++ .|.|| ....+.+..|+ -+|+.++|+...+++..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~-~~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYM-DIGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 5688899988865 45554 23344444443 47888888887777644
No 65
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=58.68 E-value=41 Score=23.25 Aligned_cols=49 Identities=14% Similarity=-0.013 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
+.|...|++|+.+ .|.++ ....+.+..+.. +|+.++|+...++++...-
T Consensus 36 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 5688889988864 34443 234555555544 7999999998888776543
No 66
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=58.45 E-value=50 Score=23.96 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++.-.
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 6689999998764 466663 34556665544 799999998887776554
No 67
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=58.34 E-value=26 Score=29.63 Aligned_cols=69 Identities=17% Similarity=0.157 Sum_probs=44.8
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHh-----HHhhHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025713 26 DVELTVEERNLLSVGYKNVIGARRASWRILSS-----IEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHL 100 (249)
Q Consensus 26 ~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~-----ieq~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 100 (249)
-|+||.|-|.=|....|...-.-|.|.|.+.. +...++ .+ .+-++-.++.+++|..+.+..+.-||..+
T Consensus 126 iP~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K-~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 126 FPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEK-AG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999999999988842 111111 00 01133445566666666666666666543
No 68
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=58.19 E-value=17 Score=31.95 Aligned_cols=49 Identities=16% Similarity=0.118 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 191 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~af 191 (249)
++|..+|++|++ +.|.++..-.+.+++..|++..+|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFS-----KELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----cCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 456666666653 3344444455667777777777888888877655554
No 69
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=57.59 E-value=33 Score=22.86 Aligned_cols=46 Identities=9% Similarity=-0.062 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5678888888764 34443 34556665544 57999999887666543
No 70
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=57.55 E-value=25 Score=27.34 Aligned_cols=53 Identities=6% Similarity=0.105 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+++.. ..+|.+|.......+.+..+ ..+|+.++|+...++++.
T Consensus 55 ~~A~~~~~~a~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 55 ETAISTLNDAVEQGR-EMRADYKVISKSFARIGNAY-HKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccccchHHHHHHHHHHHHHH-HHcccHHHHHHHHHHHHh
Confidence 679999999999874 35555554444555555554 457999999999888876
No 71
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=56.94 E-value=34 Score=25.44 Aligned_cols=13 Identities=8% Similarity=0.107 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTT 150 (249)
Q Consensus 138 ~~A~~aY~~A~~~ 150 (249)
+.|...|++|+.+
T Consensus 62 ~~A~~~~~~al~~ 74 (164)
T 3sz7_A 62 EKAAEDAELATVV 74 (164)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 4456666666544
No 72
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=56.69 E-value=41 Score=22.74 Aligned_cols=46 Identities=15% Similarity=0.132 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.. .|.+| ....+.+..++ ..|+.++|+....+++.
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANA---VYFCNRAAAYS-KLGNYAGAVQDCERAIC 74 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHH-HhhchHHHHHHHHHHHh
Confidence 3455556655543 22222 22333333333 35666666666666554
No 73
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=56.54 E-value=48 Score=25.64 Aligned_cols=34 Identities=18% Similarity=0.009 Sum_probs=29.7
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 025713 23 ANLDVELTVEERNLLSVGYKNVIGARRASWRILS 56 (249)
Q Consensus 23 v~~~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~ 56 (249)
|-.+++||.|-|.=|.--.|...-.-|-|.|.+.
T Consensus 27 ~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 27 VRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp CCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5679999999999999999998888888888874
No 74
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=56.27 E-value=42 Score=22.68 Aligned_cols=47 Identities=13% Similarity=0.058 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888764 34443 33445555444 479999999887777653
No 75
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=56.24 E-value=35 Score=28.64 Aligned_cols=55 Identities=9% Similarity=0.016 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
+.|...|++|+.++.. . +.+|.......+.+ ..|..+|+.++|+...++|++-+-
T Consensus 64 ~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la-~~~~~~g~~~~A~~~~~~al~~~~ 118 (406)
T 3sf4_A 64 AKALEYHHHDLTLART-I-GDQLGEAKASGNLG-NTLKVLGNFDEAIVCCQRHLDISR 118 (406)
T ss_dssp HHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c-cccHHHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHHHH
Confidence 5689999999999864 3 23344444444444 455568999999999988877654
No 76
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=55.96 E-value=32 Score=26.09 Aligned_cols=48 Identities=21% Similarity=0.126 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++++. .|.+|....+..+.+..++. .|+.++|+...++++.
T Consensus 94 ~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~ 141 (225)
T 2vq2_A 94 AESMAYFDKALA------DPTYPTPYIANLNKGICSAK-QGQFGLAEAYLKRSLA 141 (225)
T ss_dssp HHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 445666666553 34445444444555554444 5677776666665544
No 77
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=55.21 E-value=40 Score=24.29 Aligned_cols=47 Identities=4% Similarity=-0.180 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++..
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNM-ALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHh
Confidence 5688888888865 34443 34455555544 479999999888887653
No 78
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=54.61 E-value=14 Score=32.96 Aligned_cols=54 Identities=19% Similarity=0.283 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHhc--------CCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAE--------LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~--------L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888899999876431 111567777888888888775 7999999999888865
No 79
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.48 E-value=44 Score=23.51 Aligned_cols=46 Identities=9% Similarity=-0.061 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888765 34443 344555655544 7999999887777664
No 80
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=53.97 E-value=45 Score=22.10 Aligned_cols=47 Identities=21% Similarity=0.191 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.. .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888754 34443 344555555544 79999999988887764
No 81
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=53.19 E-value=21 Score=28.40 Aligned_cols=53 Identities=17% Similarity=0.123 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 139 LSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 139 ~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
.|...|++|+++....-.+. +-.+.-++..-...|..+|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKY-KDELIEANEYIAYYYTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 37888999998885432222 223333333334445558999999998777764
No 82
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=53.15 E-value=56 Score=22.93 Aligned_cols=53 Identities=9% Similarity=-0.012 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
..|..-|++|+......-. ..+.+-.+..+++ +.|..+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~-~~~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLS-YAVYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHH-HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHH-HHHHHccCHHHHHHHHHHHHh
Confidence 5688889999877642211 1123334444444 445568999999998888865
No 83
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=52.94 E-value=43 Score=24.91 Aligned_cols=46 Identities=15% Similarity=0.251 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
++|.+.|++|+++ .|.||- ...+.+.. |..+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~-~~~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLL-YELEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHH-HHHcCchHHHHHHHHHHHH
Confidence 6688888888755 455552 33444444 4457999999987777654
No 84
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=52.86 E-value=37 Score=26.01 Aligned_cols=46 Identities=9% Similarity=0.041 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|..+|++|+.+ .|.+|. ...|.++.|+ -+|++++|+..-++|+.
T Consensus 87 ~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~-~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 87 QQAADLYAVAFAL-----GKNDYT---PVFHTGQCQL-RLKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 6789999999855 456663 4456666555 48999999887666654
No 85
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=52.76 E-value=31 Score=19.91 Aligned_cols=26 Identities=31% Similarity=0.666 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025713 72 KRIKEYRQKVEAELSKISTDIMQVID 97 (249)
Q Consensus 72 ~~i~~yk~ki~~EL~~~C~eii~lid 97 (249)
+.++.||.+|.+.|..+.+.|-.++-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45778999999999999998877663
No 86
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=52.58 E-value=52 Score=27.95 Aligned_cols=58 Identities=10% Similarity=0.024 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 135 DVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 135 ~~~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
...+.|...|++|++++... +.+|.......+.+. .|..+|+.++|+...++|+.-.-
T Consensus 197 ~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~-~~~~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 197 EALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGN-TYYLLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHH-HHHHcCChHHHHHHHHHHHHHHH
Confidence 34678999999999988643 223444444444444 45558999999999888876554
No 87
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=52.19 E-value=42 Score=27.20 Aligned_cols=55 Identities=15% Similarity=-0.022 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC-cchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTH-PIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~-pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.+....-.+.+ |-...+..+.+..+ ..+|+.++|+...++++..
T Consensus 210 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 210 KTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVC-RKLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHH-HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHhh
Confidence 6788999999988854333222 33334455555554 4579999999988887754
No 88
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=52.19 E-value=35 Score=30.95 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhcCCC--------CCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSP--------THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~p--------t~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5688888888876521 110 134667788888888776 7999999998888754
No 89
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=51.86 E-value=41 Score=27.83 Aligned_cols=68 Identities=18% Similarity=0.294 Sum_probs=44.0
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHh-----HHhhHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 025713 26 DVELTVEERNLLSVGYKNVIGARRASWRILSS-----IEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEH 99 (249)
Q Consensus 26 ~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~-----ieq~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 99 (249)
-|+||.|-|.=|....|...-..|.+.|.+.. +...++ .+ .+-++-.++.+++|..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K-~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1dd5_A 102 FPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQK-EG-----LIPEDDAKRLENEIQKLTDEFIEKLDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999989999988842 111110 00 0123344456666666666666666654
No 90
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=51.20 E-value=49 Score=23.75 Aligned_cols=47 Identities=21% Similarity=0.122 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.+. |.+ ..+..+.+..++. +|+.++|+...++++..
T Consensus 30 ~~A~~~~~~al~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 30 ENAIKFYSQAIELN-----PSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 56888888887652 333 3445555555544 79999999988887654
No 91
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=50.32 E-value=47 Score=25.50 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc-------------chhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHP-------------IRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~p-------------irLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+...++|+.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45777888877554 3344 113456667766655 7999999988888765
No 92
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=50.18 E-value=50 Score=24.61 Aligned_cols=46 Identities=9% Similarity=0.000 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 5678888888765 34443 445566666555 6999999887777654
No 93
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=49.80 E-value=43 Score=27.69 Aligned_cols=68 Identities=13% Similarity=0.143 Sum_probs=43.4
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHh-----HHhhHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 025713 26 DVELTVEERNLLSVGYKNVIGARRASWRILSS-----IEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEH 99 (249)
Q Consensus 26 ~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~-----ieq~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 99 (249)
-|+||.|-|.=|....|...-..|.+.|.+.. +...++ .+ .+-++-.++.+++|..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K-~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1ise_A 102 LPPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLK-DK-----EISEDDDRRSQDDVQKLTDAAIKKIEAA 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999989999988842 111111 00 0123344455566666666666666543
No 94
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=49.75 E-value=55 Score=21.83 Aligned_cols=46 Identities=22% Similarity=0.335 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4567777777654 23332 233444444444 6888888877777654
No 95
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=49.48 E-value=48 Score=27.79 Aligned_cols=53 Identities=13% Similarity=0.016 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchh-hhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirL-gLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
.+.|...|++|+++... . .+|... ....|.+.+|.. +|+.++|+...++|+.-
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 36788999999988753 2 123233 344455555544 68888888877777653
No 96
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=48.68 E-value=45 Score=27.54 Aligned_cols=68 Identities=19% Similarity=0.156 Sum_probs=43.6
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHh-----HHhhHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 025713 26 DVELTVEERNLLSVGYKNVIGARRASWRILSS-----IEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEH 99 (249)
Q Consensus 26 ~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~-----ieq~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 99 (249)
-|+||.|-|.=|....|...-..|.+.|.+.. +...++ .+ .+-++-.++.+++|..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K-~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1is1_A 102 LPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLK-DK-----EISEDEDRKAQEEIQKLTDVAVKKIDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999888999988842 111111 00 0123344455566666666666666553
No 97
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=48.47 E-value=43 Score=27.71 Aligned_cols=74 Identities=18% Similarity=0.173 Sum_probs=45.1
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025713 26 DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHL 100 (249)
Q Consensus 26 ~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 100 (249)
-|+||.|-|.=|....|...-..|.+.|.+..--.+. .+.-.+...+-++-.++.+++|..+.+..+.-||..+
T Consensus 103 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 103 IPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDK-LKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999998884211000 0000000011234445566666666666666666543
No 98
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=48.31 E-value=53 Score=25.04 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+. |.+| ....|.+..++. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~~-----~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINRD-----KHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----ccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 66888999988652 4443 445666666555 7999999998888877
No 99
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=48.18 E-value=39 Score=26.48 Aligned_cols=48 Identities=17% Similarity=0.213 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++++. .|.+|.......+.+..++. .|+.++|+...++++.
T Consensus 122 ~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 169 (252)
T 2ho1_A 122 EEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQ-MKKPAQAKEYFEKSLR 169 (252)
T ss_dssp HHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh------CccCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 345555555543 23445444455555554444 5777777776666654
No 100
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=48.06 E-value=52 Score=25.22 Aligned_cols=46 Identities=9% Similarity=-0.065 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ...++.+..|+ .+|+.++|+...++|+.
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~-~~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANM-YFGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcccHHHHHHHHHHHHH
Confidence 5688888888865 34443 44556666554 47999999887777664
No 101
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=47.64 E-value=60 Score=21.64 Aligned_cols=47 Identities=21% Similarity=0.308 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++++.+ .|.+| ....+.+..++. +|+.++|....++++..
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 5678888888754 34443 344556665554 79999998887776643
No 102
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=47.55 E-value=29 Score=23.89 Aligned_cols=47 Identities=19% Similarity=0.138 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+. +.|.+ .....+.+..++ -.|+.++|+...++++..
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYT-KLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHT-TTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHH-HhccHHHHHHHHHHHHHh
Confidence 457788888764 33444 344555555544 479999999988887753
No 103
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=47.46 E-value=53 Score=25.73 Aligned_cols=46 Identities=9% Similarity=0.064 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+++ .|.+| ...+|.+..++. +|+.++|+..-++++.
T Consensus 71 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 116 (208)
T 3urz_A 71 DKAYLFYKELLQK-----APNNV---DCLEACAEMQVC-RGQEKDALRMYEKILQ 116 (208)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 6788889888865 34443 455666666555 6999999988777765
No 104
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=47.44 E-value=48 Score=27.35 Aligned_cols=68 Identities=22% Similarity=0.211 Sum_probs=42.7
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHh-----HHhhHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 025713 26 DVELTVEERNLLSVGYKNVIGARRASWRILSS-----IEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEH 99 (249)
Q Consensus 26 ~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~-----ieq~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 99 (249)
-|+||.|-|.=|..-.|...-..|.+.|.+.. +...++ .+ .+-++-.++.+++|..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K-~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 102 VPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRK-EG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999888999988842 111111 00 0113344455556666666666555543
No 105
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=46.68 E-value=54 Score=25.85 Aligned_cols=48 Identities=19% Similarity=0.228 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
.+.|...|++|+++ .|.+| ...+|.+..++. +|+.++|+...++|+.-
T Consensus 100 ~~~A~~~~~~al~~-----~P~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 147 (217)
T 2pl2_A 100 LEQALSVLKDAERV-----NPRYA---PLHLQRGLVYAL-LGERDKAEASLKQALAL 147 (217)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cCChHHHHHHHHHHHhc
Confidence 46688888888754 45554 344556665554 79999999888877653
No 106
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=46.39 E-value=77 Score=26.10 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=45.9
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHhHHhhHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025713 26 DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHL 100 (249)
Q Consensus 26 ~~~Ls~EERnLlSvAyKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 100 (249)
-|+||.|-|.=|....|...-..|.+.|.+..--.+.-.+ .. ++-++-.++.+++|..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk-~~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEE-LE---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ST---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999884211111000 00 02244455666777777666666666543
No 107
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=46.34 E-value=23 Score=32.25 Aligned_cols=53 Identities=17% Similarity=0.105 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISEL 198 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~~l 198 (249)
.+.|...|++|+.. +| ...+-+.|+-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 36688888888632 23 3457888998999999999999999999999998754
No 108
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=45.45 E-value=22 Score=26.24 Aligned_cols=60 Identities=15% Similarity=0.247 Sum_probs=38.3
Q ss_pred CcchhhhheeccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh----hhHHHHHHH
Q 025713 107 GESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLG----LALNFSVFY 173 (249)
Q Consensus 107 ~eskvfy~KmkgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLg----LaLN~SVF~ 173 (249)
+.+.+|+ .|+.--|+-.+...-+ .-+..+.+..+.|++-- +..|.||..|+ +.-+|++|+
T Consensus 4 ~~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~R 67 (92)
T 2g0u_A 4 PPTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYR 67 (92)
T ss_dssp CCCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3466776 4455557766654322 22455666677777554 36899999998 666777764
No 109
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=45.37 E-value=17 Score=31.45 Aligned_cols=53 Identities=17% Similarity=0.237 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhcCCC--------CCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSP--------THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~p--------t~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|..+|++|+.+... .+. .+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 164 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5677777777765421 100 123445666777776555 5888888877776643
No 110
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=44.76 E-value=72 Score=22.96 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++++.. .|.+| ....+.+..++ ..|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 5677888887755 23333 33455555444 479999999988887654
No 111
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=44.39 E-value=47 Score=30.42 Aligned_cols=15 Identities=7% Similarity=-0.086 Sum_probs=8.1
Q ss_pred hCChHHHHHHHHHHH
Q 025713 177 MNSPERACHLAKQAF 191 (249)
Q Consensus 177 ~~~~~~A~~iak~af 191 (249)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 466666555555444
No 112
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=43.74 E-value=70 Score=24.34 Aligned_cols=46 Identities=11% Similarity=0.057 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.||. ...|.++.|+. +|+.++|+..-++|+.
T Consensus 53 ~eA~~~~~~al~~-----~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 53 EEAEVFFRFLCIY-----DFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 5678888887744 566654 34455555554 7999999987777654
No 113
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=43.47 E-value=77 Score=22.86 Aligned_cols=46 Identities=17% Similarity=0.028 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+. +.|.+|. ...+.+..++ .+|+.++|+...++|+.
T Consensus 35 ~~A~~~~~~al~-----~~p~~~~---~~~~lg~~~~-~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 35 DDAQKIFQALCM-----LDHYDAR---YFLGLGACRQ-SLGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCccHH---HHHHHHHHHH-HHhhHHHHHHHHHHHHh
Confidence 567777777764 3455553 3345555544 47999999998888765
No 114
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=43.14 E-value=47 Score=28.07 Aligned_cols=53 Identities=17% Similarity=-0.010 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...+++|+.. .|+.+|...+.+++.-...|-..|+.++|....++|..-+
T Consensus 31 ~~A~~~~~~al~~----~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 83 (373)
T 1hz4_A 31 DEAERLAKLALEE----LPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMA 83 (373)
T ss_dssp HHHHHHHHHHHHT----CCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3455666666542 2444444344444444444455677777777777666543
No 115
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=42.38 E-value=34 Score=28.72 Aligned_cols=53 Identities=21% Similarity=0.060 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|..+|++|+++... + -+|...+-+++---..|.. |++++|+..-++|++-.
T Consensus 93 ~~A~~~~~~Al~l~~~-~--g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~ 145 (307)
T 2ifu_A 93 PEAVQYIEKASVMYVE-N--GTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVF 145 (307)
T ss_dssp GGGHHHHHHHHHHHHT-T--TCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHH
Confidence 4589999999999853 2 3455555555444444555 99999999888887643
No 116
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=42.34 E-value=71 Score=26.45 Aligned_cols=53 Identities=9% Similarity=-0.231 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHH-hCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEI-MNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei-~~~~~~A~~iak~afd~ 193 (249)
+.|..+|++|+++... + -+|...+-+++----.|.- +|++++|+..-++|+.-
T Consensus 94 ~~A~~~~~~Al~l~~~-~--g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~ 147 (292)
T 1qqe_A 94 VNAVDSLENAIQIFTH-R--GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEW 147 (292)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 6799999999999853 2 2444444455444445555 59999999988888654
No 117
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=41.85 E-value=45 Score=27.80 Aligned_cols=49 Identities=16% Similarity=0.078 Sum_probs=28.8
Q ss_pred HHHHHHHHHHh--cCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 143 AYQAASTTAEA--ELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 143 aY~~A~~~a~~--~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
-|++|...... .+.|.+ .....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 53 ~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQS---VKAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 45566665543 333444 344455555444 47888888888877776543
No 118
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=41.64 E-value=47 Score=23.79 Aligned_cols=46 Identities=13% Similarity=0.059 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|..+|++|+++ .|.+|- ...+.++.+.. +|+.++|+...++++.
T Consensus 68 ~~A~~~~~~al~l-----~P~~~~---~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 68 GLAIIALNHARML-----DPKDIA---VHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 6788899988755 455542 34555555444 6888888877766653
No 119
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=41.50 E-value=70 Score=25.10 Aligned_cols=46 Identities=17% Similarity=0.116 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 94 ~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 94 DAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5688888888865 34443 233444444444 7999999988888765
No 120
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=41.30 E-value=47 Score=28.61 Aligned_cols=50 Identities=8% Similarity=0.076 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+. +.|.+|....-++..-+..|.-+|+.++|+...++++.
T Consensus 274 ~~A~~~~~~~l~-----~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 274 TDATSKYESVMK-----TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HHHHHHHHHHHH-----HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 445566666554 34566654443433334445557888888877777653
No 121
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=40.69 E-value=91 Score=22.37 Aligned_cols=47 Identities=13% Similarity=0.178 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++++.. .|.+| ....+.+..++. .|+.++|....++++..
T Consensus 59 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 59 DRGTELLERSLAD-----APDNV---KVATVLGLTYVQ-VQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHhc
Confidence 5688888888765 33333 334455555444 69999999988887654
No 122
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=40.39 E-value=78 Score=24.81 Aligned_cols=47 Identities=11% Similarity=0.174 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.+ .|.+| ....+.+..++ ..|+.++|+...++++..
T Consensus 60 ~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 60 ALARNDFSQALAI-----RPDMP---EVFNYLGIYLT-QAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCcH---HHHHHHHHHHH-HccCHHHHHHHHHHHHhc
Confidence 5688999998865 34443 33444555444 479999999988888663
No 123
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=39.85 E-value=91 Score=23.05 Aligned_cols=46 Identities=15% Similarity=0.018 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+. +.|.+|.- ..+.++.++ .+|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~-~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQ-AMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHH-HHhhHHHHHHHHHHHHh
Confidence 456777777664 35666533 345555544 47999999998888764
No 124
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=38.95 E-value=52 Score=27.45 Aligned_cols=46 Identities=9% Similarity=0.151 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+. |.+ ..+.++++.|+.. +|+.++|+.+-++|+.
T Consensus 186 ~~A~~~~~~al~~~-----p~~---~~~~~~~~~~~~~-~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 186 SVAFKIFELGLKKY-----GDI---PEYVLAYIDYLSH-LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 56778888887653 333 3566788877654 5888888776666554
No 125
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=37.18 E-value=66 Score=24.44 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhcC--------CCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAEL--------SPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 191 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L--------~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~af 191 (249)
+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 668889999886542100 00334444566777776665 799999988766654
No 126
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=36.82 E-value=75 Score=28.76 Aligned_cols=50 Identities=20% Similarity=0.077 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
.+.|..+|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 237 ~~~A~~~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 237 SQQALSAYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 57788888888866 23222555667777777666 7999999988887764
No 127
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=36.80 E-value=1.2e+02 Score=25.87 Aligned_cols=54 Identities=13% Similarity=0.162 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++++.++... ..++.|..+..|.+..|++ .|+.++|+.+.+++....
T Consensus 112 ~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~l~~~~~~~ 165 (434)
T 4b4t_Q 112 DDQIFVCEKSIEFAKRE--KRVFLKHSLSIKLATLHYQ-KKQYKDSLALINDLLREF 165 (434)
T ss_dssp HHHHHHHHHHHHHHHHS--SCCSSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHH-ccChHHHHHHHHHHHHHH
Confidence 45666777777776532 2345666666677666655 477777777766665443
No 128
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=36.55 E-value=1.1e+02 Score=21.63 Aligned_cols=46 Identities=11% Similarity=-0.045 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....+.++.+. -+|+.++|+...++|+.
T Consensus 34 ~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~-~~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 34 AEAALAFEAVCQK-----EPERE---EAWRSLGLTQA-ENEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 5678888888754 44554 33344555444 47999999987776654
No 129
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=36.29 E-value=89 Score=21.36 Aligned_cols=45 Identities=16% Similarity=0.073 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 140 SMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 140 A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
|...|++|+. +.|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 4 a~~~~~~al~-----~~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 48 (115)
T 2kat_A 4 ITERLEAMLA-----QGTDNM---LLRFTLGKTYAE-HEQFDAALPHLRAALDF 48 (115)
T ss_dssp HHHHHHHHHT-----TTCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----hCCCcH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Confidence 5667777753 455655 345566665555 79999999988887653
No 130
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=35.81 E-value=1e+02 Score=23.60 Aligned_cols=47 Identities=19% Similarity=0.083 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.+. |.+| .+..+.+..++ .+|+.++|+...++++..
T Consensus 156 ~~A~~~~~~a~~~~-----~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~~ 202 (258)
T 3uq3_A 156 PNAVKAYTEMIKRA-----PEDA---RGYSNRAAALA-KLMSFPEAIADCNKAIEK 202 (258)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-----cccH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHHh
Confidence 56788888887542 3443 34445555444 479999999888887653
No 131
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=35.43 E-value=80 Score=25.63 Aligned_cols=15 Identities=13% Similarity=-0.117 Sum_probs=8.6
Q ss_pred hCChHHHHHHHHHHH
Q 025713 177 MNSPERACHLAKQAF 191 (249)
Q Consensus 177 ~~~~~~A~~iak~af 191 (249)
+|+.++|+...++|+
T Consensus 319 ~g~~~~A~~~~~~a~ 333 (359)
T 3ieg_A 319 EEMYDEAIQDYEAAQ 333 (359)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 566666665555544
No 132
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=35.31 E-value=1.1e+02 Score=22.60 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCCh--HHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSP--ERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~--~~A~~iak~afd~ 193 (249)
+.|..+|++|+.+. |.+| .+..+.+..+|...|+. ++|+...++++..
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 67899999998764 3443 34566677656667888 9999888777653
No 133
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=35.13 E-value=1.1e+02 Score=23.35 Aligned_cols=15 Identities=20% Similarity=0.326 Sum_probs=7.1
Q ss_pred hCChHHHHHHHHHHH
Q 025713 177 MNSPERACHLAKQAF 191 (249)
Q Consensus 177 ~~~~~~A~~iak~af 191 (249)
.|+.++|+...++++
T Consensus 138 ~~~~~~A~~~~~~~~ 152 (243)
T 2q7f_A 138 LEQPKLALPYLQRAV 152 (243)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHH
Confidence 345555544444444
No 134
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=34.99 E-value=1.3e+02 Score=23.63 Aligned_cols=49 Identities=14% Similarity=0.126 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++++. ..|.+|..-...++.+..|+ -+|+.++|+...++++.
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Confidence 557777777664 34666755455555554444 47999999987777654
No 135
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=34.94 E-value=1e+02 Score=20.57 Aligned_cols=47 Identities=19% Similarity=0.195 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++++.. .|.+| ....+.+.. |...|+.++|+...++++..
T Consensus 52 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~-~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 52 DEAIEYYQKALEL-----DPRSA---EAWYNLGNA-YYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHH-HHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCch---HHHHHHHHH-HHHhcCHHHHHHHHHHHHHh
Confidence 5677888887754 23333 233444444 44579999999888777653
No 136
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=34.60 E-value=1.4e+02 Score=23.76 Aligned_cols=50 Identities=18% Similarity=0.189 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhh--------------HHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLA--------------LNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLa--------------LN~SVF~yei~~~~~~A~~iak~afd 192 (249)
.+.|...|++++.. .|.+|...... ++.+..|+. .|+.++|+...++++.
T Consensus 113 ~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 113 TRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFD 176 (261)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 46788888888754 45666444333 666766655 7999999998887764
No 137
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=34.49 E-value=86 Score=26.14 Aligned_cols=15 Identities=0% Similarity=-0.330 Sum_probs=8.1
Q ss_pred HHHHHHHHHHhcccc
Q 025713 8 FVYIAKLAEQAERYD 22 (249)
Q Consensus 8 li~~Aklaeq~eRy~ 22 (249)
++.+|...-+.++|+
T Consensus 68 ~~~~~~~~~~~g~~~ 82 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLP 82 (365)
T ss_dssp HHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHCCCHH
Confidence 445555555555555
No 138
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=33.72 E-value=86 Score=25.44 Aligned_cols=50 Identities=10% Similarity=0.090 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhh-hhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLG-LALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLg-LaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|+++++. .|.+|.... +..+.+..++ -+|+.++|+...++++..
T Consensus 251 ~~A~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 251 TDATSKYESVMKT-----EPSVAEYTVRSKERICHCFS-KDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCchHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHh
Confidence 4566666666543 355665443 3445555554 479999999998888764
No 139
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=33.56 E-value=1.2e+02 Score=20.99 Aligned_cols=50 Identities=14% Similarity=0.074 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 196 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~ 196 (249)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.-.
T Consensus 60 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 60 EQALADCRRALEL-----DGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CchhH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHChh
Confidence 5688888888865 34443 345555555554 79999999998888876643
No 140
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=33.46 E-value=1e+02 Score=24.55 Aligned_cols=50 Identities=14% Similarity=0.126 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++++ ...|.+|......++.+.-|+. +|+.++|+...++++..
T Consensus 32 ~~A~~~~~~~l-----~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 32 DRAIEYFKAVF-----TYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQI 81 (261)
T ss_dssp HHHHHHHHHHG-----GGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence 44666666654 3457777665555566655555 79999999988877664
No 141
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=33.42 E-value=1.1e+02 Score=23.71 Aligned_cols=46 Identities=13% Similarity=0.115 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 191 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~af 191 (249)
+.|...|++|+++. ||.++ ....|.+. .|..+|+.++|+...++|+
T Consensus 24 ~~A~~~~~~al~~~----~~~~~---~~~~~~~~-~~~~~~~~~~A~~~~~~al 69 (228)
T 4i17_A 24 AVAFEKYSEYLKLT----NNQDS---VTAYNCGV-CADNIKKYKEAADYFDIAI 69 (228)
T ss_dssp HHHHHHHHHHHHHT----TTCCH---HHHHHHHH-HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc----CCCCc---HHHHHHHH-HHHHhhcHHHHHHHHHHHH
Confidence 44666666665443 11222 22233222 2333566666666555554
No 142
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=33.29 E-value=93 Score=24.06 Aligned_cols=46 Identities=9% Similarity=0.039 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+. +.|. ......+.+..|+. +|+.++|+...++++.
T Consensus 59 ~~A~~~~~~al~-----~~p~---~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 59 KEAADYFDIAIK-----KNYN---LANAYIGKSAAYRD-MKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHH-----TTCS---HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCcc---hHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 568888888873 3344 34455566665555 7999999998888765
No 143
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=33.14 E-value=62 Score=25.78 Aligned_cols=95 Identities=16% Similarity=0.206 Sum_probs=53.5
Q ss_pred ccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCc---chhhhhHHHHHHH----HHHhCChHHHHHHHHH
Q 025713 117 KGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHP---IRLGLALNFSVFY----YEIMNSPERACHLAKQ 189 (249)
Q Consensus 117 kgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~p---irLgLaLN~SVF~----yei~~~~~~A~~iak~ 189 (249)
.|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---|+ -+-.++.++|+.
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 3445555556666666666788999999999865 45555 3455555322221 111245666665
Q ss_pred HHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhcc
Q 025713 190 AFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTS 225 (249)
Q Consensus 190 afd~Ai~~ld~l~ee~y~ds~~ilqlLrdNl~~W~~ 225 (249)
+|+.|+.. + .+ +.+...-+++..++-.+|..
T Consensus 113 ~~~kAl~l-~---P~-~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 113 FFQQAVDE-Q---PD-NTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHHH-C---TT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHh-C---CC-CHHHHHHHHHHHhCHhccCc
Confidence 45555532 1 11 23445556666777777653
No 144
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=31.70 E-value=1.1e+02 Score=26.16 Aligned_cols=46 Identities=9% Similarity=-0.063 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|..+|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5688888888865 34444 334555555444 7999999888877764
No 145
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=31.50 E-value=45 Score=29.73 Aligned_cols=62 Identities=10% Similarity=0.084 Sum_probs=44.5
Q ss_pred cccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCcch-hhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 118 GDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIR-LGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 118 gDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pir-LgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
|-+|-.+=++.-|+. ++|.+.|++|++++ |-. +..-.-|+-|+..-.++++.|....++|+.
T Consensus 206 G~lY~~vPp~~gGd~-----ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 206 TKFYAAAPESFGGGM-----EKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHSCTTTTCCH-----HHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccCCCH-----HHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 444433334444443 67999999999875 533 666778888888878999999888777765
No 146
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=31.38 E-value=1.5e+02 Score=26.47 Aligned_cols=55 Identities=9% Similarity=-0.000 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
.+.|.+.|++++++... . +.+|-....+++.-...|...|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46788888888887643 2 4456654444444444555689999999998888754
No 147
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=31.22 E-value=94 Score=25.80 Aligned_cols=48 Identities=8% Similarity=0.048 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
.+.|...|++|++ ++|.+ ..+.+.++.+.+...|++++|+.+-++|+.
T Consensus 150 ~~~A~~~~~~a~~-----~~p~~---~~~~~~~a~~~~~~~~~~~~A~~~~~~al~ 197 (308)
T 2ond_A 150 IKSGRMIFKKARE-----DARTR---HHVYVTAALMEYYCSKDKSVAFKIFELGLK 197 (308)
T ss_dssp HHHHHHHHHHHHT-----STTCC---THHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----cCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3557777777753 23332 233445555656667888888877666654
No 148
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=30.87 E-value=1.5e+02 Score=21.50 Aligned_cols=68 Identities=15% Similarity=0.084 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHh---CChHHHHHHHHHHHHHHHHhhcc---CCcccHHhHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIM---NSPERACHLAKQAFDEAISELDT---LSEESYKDSTL 211 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~---~~~~~A~~iak~afd~Ai~~ld~---l~ee~y~ds~~ 211 (249)
..-+.+|++|+..... +|+ .|=. |+++.|+++-++.+..-...+.- =..++|..+..
T Consensus 7 ~~ik~~h~~AF~~Is~------------aL~-----~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~ 69 (89)
T 3eab_A 7 ERVRVFHKQAFEYISI------------ALR-----IDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARR 69 (89)
T ss_dssp HHHHHHHHHHHHHHHH------------HHH-----HHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH------------HHH-----hhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHH
Confidence 3456777888776643 333 3334 89999999988886655444331 13456888999
Q ss_pred HHHHHHhhHhh
Q 025713 212 IMQLLRDNLTL 222 (249)
Q Consensus 212 ilqlLrdNl~~ 222 (249)
+-+-|+.||..
T Consensus 70 LQ~KM~~nL~~ 80 (89)
T 3eab_A 70 LQAKMMTNLVM 80 (89)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999975
No 149
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=30.66 E-value=1.5e+02 Score=28.34 Aligned_cols=54 Identities=15% Similarity=0.044 Sum_probs=35.9
Q ss_pred hhhcccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCc-chhhhhHHHHHHHHHHhCC
Q 025713 124 LAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHP-IRLGLALNFSVFYYEIMNS 179 (249)
Q Consensus 124 ~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~p-irLgLaLN~SVF~yei~~~ 179 (249)
.||....+.-.+++++|.++|++|++..+. +..|+- --.-.+||- +-.||.-||
T Consensus 435 k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aGD 489 (526)
T 2wb7_A 435 KAKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAGD 489 (526)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhccH
Confidence 466667777788999999999999999964 554544 333334433 333665543
No 150
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=30.51 E-value=59 Score=24.12 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
.++|..+|++|.. .+|-+-...++.+..|+. +|+.++|+...++|+.-
T Consensus 13 ~e~ai~~~~~a~~--------~~p~~~~~~~~la~~y~~-~~~~~~A~~~~~~al~~ 60 (150)
T 4ga2_A 13 VERYIASVQGSTP--------SPRQKSIKGFYFAKLYYE-AKEYDLAKKYICTYINV 60 (150)
T ss_dssp HHHHHHHHHHHSC--------SHHHHHTTHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc--------cCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 3556666666542 233333345677777776 69999999988887653
No 151
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=30.26 E-value=1.3e+02 Score=25.08 Aligned_cols=48 Identities=17% Similarity=0.242 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
.+.|...|++|+++ .|.+| ....+.+.. |..+|+.++|+...++++..
T Consensus 115 ~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~al~~ 162 (365)
T 4eqf_A 115 EQAAIVALQRCLEL-----QPNNL---KALMALAVS-YTNTSHQQDACEALKNWIKQ 162 (365)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHH-HHccccHHHHHHHHHHHHHh
Confidence 36788899998865 34443 233444444 45579999999999888764
No 152
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=30.06 E-value=83 Score=26.02 Aligned_cols=59 Identities=3% Similarity=0.068 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCC---CCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSP---THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 196 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~p---t~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai~ 196 (249)
.+.|...|++|+.+......| .+|..-....+.+..+. .+|+.++|..+.+.+++....
T Consensus 301 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~l~~~~~ 362 (368)
T 1fch_A 301 HREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALS-MLGQSDAYGAADARDLSTLLT 362 (368)
T ss_dssp HHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHH-HHTCGGGHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHH-HhCChHhHHHhHHHHHHHHHH
Confidence 367888999998887544222 23444455555555544 479999999998877665443
No 153
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=29.78 E-value=1.3e+02 Score=24.72 Aligned_cols=46 Identities=20% Similarity=0.194 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....+.+..+ ..+|+.++|+...++++.
T Consensus 234 ~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~-~~~g~~~~A~~~~~~al~ 279 (368)
T 1fch_A 234 DKAVDCFTAALSV-----RPNDY---LLWNKLGATL-ANGNQSEEAVAAYRRALE 279 (368)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHH-HHcCCHHHHHHHHHHHHH
Confidence 4566666666544 33333 2333444433 336777777777776654
No 154
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=29.78 E-value=1e+02 Score=23.96 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| .+..+.+..++ ..|+.++|+...++++.
T Consensus 88 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 88 KLADEEYRKALAS-----DSRNA---RVLNNYGGFLY-EQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHH-HHhHHHHHHHHHHHHHh
Confidence 5688888888765 23332 34445555444 47999999998888776
No 155
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=29.35 E-value=1e+02 Score=30.20 Aligned_cols=46 Identities=13% Similarity=0.156 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|.++|++|+++ .|.++ ....|.+..|++ +|+.++|+...++|+.
T Consensus 94 ~~A~~~~~kAl~l-----~P~~~---~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 94 QGALQCYTRAIQI-----NPAFA---DAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688899998865 34443 445566665555 6999999888888765
No 156
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.34 E-value=2e+02 Score=24.37 Aligned_cols=56 Identities=14% Similarity=-0.035 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 195 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~Ai 195 (249)
++|...|++|..++.. .+ ..|.-.|...+...-+|...++..+|+..-.++|...-
T Consensus 192 ~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 192 AKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 6789999999998853 43 22344466667777777888999999998888887654
No 157
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=28.64 E-value=1.1e+02 Score=30.03 Aligned_cols=13 Identities=15% Similarity=0.340 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTT 150 (249)
Q Consensus 138 ~~A~~aY~~A~~~ 150 (249)
+.|..+|++|+++
T Consensus 26 ~eAi~~~~kAl~l 38 (723)
T 4gyw_A 26 EEAVRLYRKALEV 38 (723)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3455555555543
No 158
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=28.51 E-value=96 Score=28.29 Aligned_cols=14 Identities=21% Similarity=-0.078 Sum_probs=6.5
Q ss_pred hCChHHHHHHHHHH
Q 025713 177 MNSPERACHLAKQA 190 (249)
Q Consensus 177 ~~~~~~A~~iak~a 190 (249)
+|+.++|+...++|
T Consensus 53 ~g~~~~A~~~~~~a 66 (477)
T 1wao_1 53 TECYGYALGDATRA 66 (477)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHH
Confidence 34444444444444
No 159
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=28.30 E-value=48 Score=28.63 Aligned_cols=49 Identities=12% Similarity=0.141 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc--------------chhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHP--------------IRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~p--------------irLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 160
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=28.27 E-value=1.3e+02 Score=22.91 Aligned_cols=15 Identities=7% Similarity=-0.144 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcccc
Q 025713 8 FVYIAKLAEQAERYD 22 (249)
Q Consensus 8 li~~Aklaeq~eRy~ 22 (249)
+..+|...-+.++|+
T Consensus 26 ~~~~a~~~~~~~~~~ 40 (243)
T 2q7f_A 26 GGQQMGRGSEFGDYE 40 (243)
T ss_dssp ---------------
T ss_pred HHHHHHHHHHhhCHH
Confidence 445566666667776
No 161
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=27.59 E-value=1.8e+02 Score=21.60 Aligned_cols=47 Identities=11% Similarity=0.017 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|+++++. .|.+| ....+.+..++ .+|+.++|+...++++..
T Consensus 130 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 130 GLAEAYLKRSLAA-----QPQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 5688888888754 34443 23344444444 479999999988887663
No 162
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=27.32 E-value=1.4e+02 Score=19.80 Aligned_cols=46 Identities=22% Similarity=0.296 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++++.. .|.+| ....+.+..++ -.|+.++|....++++.
T Consensus 86 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 86 DEAIEYYQKALEL-----DPRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 131 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHH-HHccHHHHHHHHHHHHc
Confidence 5678888887754 33333 23344444444 47999999888777654
No 163
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=26.56 E-value=1.6e+02 Score=25.37 Aligned_cols=56 Identities=18% Similarity=0.117 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHhcC--CCCC----cchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAEL--SPTH----PIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L--~pt~----pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++..
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~ 266 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIEL 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhh
Confidence 4678888888887543334 4554 5555555666665555 69999999988887653
No 164
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=25.08 E-value=1.9e+02 Score=23.01 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 189 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 189 DSAAANLRRAVEL-----RPDDA---QLWNKLGATLAN-GNRPQEALDAYNRALD 234 (327)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4455555555543 33333 233344444443 6788887777776654
No 165
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=24.87 E-value=1.9e+02 Score=22.97 Aligned_cols=48 Identities=21% Similarity=0.200 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+.|...|++|+.+ .|.+|. ...+.+..+ ..+|+.++|+...++++...
T Consensus 223 ~~A~~~~~~a~~~-----~~~~~~---~~~~l~~~~-~~~g~~~~A~~~~~~a~~~~ 270 (327)
T 3cv0_A 223 QEALDAYNRALDI-----NPGYVR---VMYNMAVSY-SNMSQYDLAAKQLVRAIYMQ 270 (327)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHH-HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCHH---HHHHHHHHH-HHhccHHHHHHHHHHHHHhC
Confidence 4566677766643 344432 334455544 45799999999888877654
No 166
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=24.56 E-value=2e+02 Score=25.11 Aligned_cols=55 Identities=11% Similarity=0.097 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHh--cCCCCCcc---hhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 139 LSMKAYQAASTTAEA--ELSPTHPI---RLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 139 ~A~~aY~~A~~~a~~--~L~pt~pi---rLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++..
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~ 272 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINL 272 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc
Confidence 444556666655543 45566653 34555666666677789999999988888653
No 167
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=24.16 E-value=3.5e+02 Score=23.44 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 137 ADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 137 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
.+.|...|++|+++ .|.+| ....+.+..|+ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46678888887755 45555 34455555544 5799999999888877654
No 168
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=24.10 E-value=28 Score=32.97 Aligned_cols=44 Identities=25% Similarity=0.422 Sum_probs=30.3
Q ss_pred ccccchhhhhcccchhhHHHHHHHHHHHHHHHHHHHhcCCCCC---cchhhhhHHH------HHHHHH
Q 025713 117 KGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTH---PIRLGLALNF------SVFYYE 175 (249)
Q Consensus 117 kgDyyRY~aE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~---pirLgLaLN~------SVF~ye 175 (249)
-||..||...+ ..|...|.+|..+. |.+ -..||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~-----P~~G~~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLV-----PSNGQPYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHC-----TTBSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhC-----CCCCchHHHHHHHHhcccccHHHHHHHH
Confidence 69999999764 57999999998664 222 1456655544 566654
No 169
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=23.87 E-value=1.8e+02 Score=26.14 Aligned_cols=21 Identities=10% Similarity=0.093 Sum_probs=12.7
Q ss_pred HHHHHhCChHHHHHHHHHHHH
Q 025713 172 FYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 172 F~yei~~~~~~A~~iak~afd 192 (249)
..|...|++++|+.+-.+|+.
T Consensus 399 ~~~~~~~~~~~A~~~~e~al~ 419 (530)
T 2ooe_A 399 MEYYCSKDKSVAFKIFELGLK 419 (530)
T ss_dssp HHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHcCChhHHHHHHHHHHH
Confidence 344456777777766655544
No 170
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=23.84 E-value=1.8e+02 Score=22.65 Aligned_cols=49 Identities=12% Similarity=-0.004 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|++ .| .+|-..+.++..-...|..+|+.++|+...++++.
T Consensus 54 ~~A~~~~~~a~~-----~~-~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~ 102 (272)
T 3u4t_A 54 DLAQKDIETYFS-----KV-NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVD 102 (272)
T ss_dssp HHHHHHHHHHHT-----TS-CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----cc-CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 456777777764 22 33333333332222334446888888877777665
No 171
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=22.94 E-value=1.1e+02 Score=25.23 Aligned_cols=13 Identities=31% Similarity=0.432 Sum_probs=5.4
Q ss_pred CChHHHHHHHHHH
Q 025713 178 NSPERACHLAKQA 190 (249)
Q Consensus 178 ~~~~~A~~iak~a 190 (249)
|+.++|+...++|
T Consensus 52 ~~~~~A~~~~~~a 64 (281)
T 2c2l_A 52 QQPEQALADCRRA 64 (281)
T ss_dssp TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 4444444444333
No 172
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=21.79 E-value=2.3e+02 Score=21.86 Aligned_cols=55 Identities=11% Similarity=0.150 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHh--------cCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEA--------ELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 193 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~--------~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd~ 193 (249)
+.|...|++|+.+.-. .+....++...+..+.+..|+ -+|+.++|+...++|+..
T Consensus 21 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 21 GQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH
Confidence 5677777777754210 111112222223333555544 479999999988887653
No 173
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=21.76 E-value=1.6e+02 Score=26.41 Aligned_cols=46 Identities=11% Similarity=0.005 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+++ .|.+| ....+.+..|+. .|+.++|+...++|+.
T Consensus 120 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 165 (474)
T 4abn_A 120 PEAEVLLSKAVKL-----EPELV---EAWNQLGEVYWK-KGDVTSAHTCFSGALT 165 (474)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 5688999999865 34443 334444444444 6999999988777653
No 174
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=21.10 E-value=2.3e+02 Score=23.43 Aligned_cols=46 Identities=13% Similarity=-0.013 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|+++++. .|.+| .+..|.++. |.-+|+.++|...-++|+.
T Consensus 183 ~eA~~~~~~~l~~-----~p~~~---~~~~~la~~-~~~~g~~~eA~~~l~~al~ 228 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPTL---LLLNGQAAC-HMAQGRWEAAEGVLQEALD 228 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHH-HHHcCCHHHHHHHHHHHHH
Confidence 4456666665533 33443 334445554 4457999999988777765
No 175
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=20.55 E-value=3e+02 Score=21.76 Aligned_cols=29 Identities=10% Similarity=0.076 Sum_probs=17.4
Q ss_pred hhHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 025713 165 LALNFSVFYYEIMNSPERACHLAKQAFDEA 194 (249)
Q Consensus 165 LaLN~SVF~yei~~~~~~A~~iak~afd~A 194 (249)
+..+.+..++. .|+.++|+...++++...
T Consensus 195 ~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 223 (330)
T 3hym_B 195 VMHEVGVVAFQ-NGEWKTAEKWFLDALEKI 223 (330)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cccHHHHHHHHHHHHHHh
Confidence 33444444443 678888777777766643
No 176
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=20.43 E-value=1.6e+02 Score=22.88 Aligned_cols=46 Identities=17% Similarity=0.150 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHh-----------CChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIM-----------NSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~-----------~~~~~A~~iak~afd 192 (249)
+.|...|++|+.+ .|.+| ....|.+..+.. + |+.++|+...++|+.
T Consensus 56 ~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 56 NPALENGKTLVAR-----TPRYL---GGYMVLSEAYVA-LYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-hhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 5688899988865 35554 334455555444 4 888888887777654
No 177
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=20.13 E-value=2.2e+02 Score=25.90 Aligned_cols=46 Identities=26% Similarity=0.301 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhHHHHHHHHHHhCChHHHHHHHHHHHH
Q 025713 138 DLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 192 (249)
Q Consensus 138 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yei~~~~~~A~~iak~afd 192 (249)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 74 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 74 AEAAVLLQQASDA-----APEHP---GIALWLGHALED-AGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5567777777654 23332 233444444333 5777777766666554
No 178
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=20.08 E-value=98 Score=25.07 Aligned_cols=51 Identities=18% Similarity=0.237 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCC----cchhhhhHHHHHHHHHHhCChHHHHHHHHHHH
Q 025713 135 DVADLSMKAYQAASTTAEAELSPTH----PIRLGLALNFSVFYYEIMNSPERACHLAKQAF 191 (249)
Q Consensus 135 ~~~~~A~~aY~~A~~~a~~~L~pt~----pirLgLaLN~SVF~yei~~~~~~A~~iak~af 191 (249)
...++-.+.|++|.. .+||+. .-+.-|=++|+.| .++ +|+++|.++=+.|.
T Consensus 33 ~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 33 ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QEPDDARDYFQMAR 87 (161)
T ss_dssp HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HCGGGCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cCHHHHHHHHHHHH
Confidence 566788899998863 467653 3445588999998 455 89998888777663
Done!