Query 025715
Match_columns 249
No_of_seqs 172 out of 1935
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 16:01:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025715.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025715hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 100.0 1.1E-40 3.7E-45 275.6 16.3 181 18-213 2-185 (191)
2 2px2_A Genome polyprotein [con 100.0 6.7E-36 2.3E-40 253.0 8.7 189 20-236 53-254 (269)
3 3gcz_A Polyprotein; flavivirus 100.0 3E-34 1E-38 246.5 10.6 182 19-228 69-263 (282)
4 2plw_A Ribosomal RNA methyltra 100.0 9.4E-33 3.2E-37 227.6 18.6 182 20-213 1-200 (201)
5 3eld_A Methyltransferase; flav 100.0 8.1E-34 2.8E-38 245.2 12.0 187 20-236 61-261 (300)
6 3evf_A RNA-directed RNA polyme 100.0 1.7E-33 5.8E-38 241.6 12.0 184 20-231 54-250 (277)
7 2nyu_A Putative ribosomal RNA 100.0 1E-31 3.4E-36 220.3 17.0 194 20-217 1-195 (196)
8 3p8z_A Mtase, non-structural p 99.9 4.8E-27 1.6E-31 195.9 14.7 156 20-206 58-226 (267)
9 2oxt_A Nucleoside-2'-O-methylt 99.9 2.8E-27 9.6E-32 204.7 11.6 176 20-229 54-248 (265)
10 1ej0_A FTSJ; methyltransferase 99.9 1.2E-25 4.1E-30 179.4 19.5 180 20-211 1-180 (180)
11 2p41_A Type II methyltransfera 99.9 6.1E-27 2.1E-31 206.5 11.5 179 19-230 61-255 (305)
12 2wa2_A Non-structural protein 99.9 3E-26 1E-30 199.4 10.7 178 20-230 62-257 (276)
13 3r24_A NSP16, 2'-O-methyl tran 99.9 6.9E-26 2.4E-30 194.3 9.8 157 40-222 108-272 (344)
14 3lkz_A Non-structural protein 99.9 7.3E-25 2.5E-29 188.3 14.0 156 21-206 75-244 (321)
15 2xyq_A Putative 2'-O-methyl tr 99.9 9.5E-22 3.3E-26 171.8 9.7 159 38-224 60-228 (290)
16 2hwk_A Helicase NSP2; rossman 99.7 5.2E-17 1.8E-21 138.3 11.9 123 91-226 186-315 (320)
17 4auk_A Ribosomal RNA large sub 99.7 2.8E-16 9.4E-21 140.5 12.8 89 19-130 182-281 (375)
18 3id6_C Fibrillarin-like rRNA/T 99.6 2.3E-14 7.8E-19 121.3 11.7 139 21-190 57-214 (232)
19 3lpm_A Putative methyltransfer 99.5 4.2E-14 1.4E-18 120.9 12.9 149 39-211 46-219 (259)
20 2ozv_A Hypothetical protein AT 99.5 1.3E-13 4.4E-18 118.2 13.3 151 39-206 34-208 (260)
21 3hp7_A Hemolysin, putative; st 99.5 1.2E-13 4.2E-18 120.4 11.8 157 19-208 63-249 (291)
22 3m4x_A NOL1/NOP2/SUN family pr 99.5 1E-13 3.5E-18 128.0 9.2 125 40-183 104-253 (456)
23 1ixk_A Methyltransferase; open 99.5 2.9E-13 9.8E-18 119.4 11.6 123 40-182 117-264 (315)
24 2frx_A Hypothetical protein YE 99.5 2.2E-13 7.5E-18 126.6 11.4 124 41-183 117-265 (479)
25 3m6w_A RRNA methylase; rRNA me 99.4 1.1E-13 3.9E-18 127.8 7.3 124 40-183 100-248 (464)
26 4df3_A Fibrillarin-like rRNA/T 99.4 7.5E-13 2.6E-17 111.9 10.9 99 39-167 75-182 (233)
27 3ajd_A Putative methyltransfer 99.4 3.6E-13 1.2E-17 116.3 7.0 128 40-183 82-230 (274)
28 2b9e_A NOL1/NOP2/SUN domain fa 99.4 2.2E-12 7.5E-17 113.6 12.2 131 40-189 101-259 (309)
29 2yxl_A PH0851 protein, 450AA l 99.4 1.3E-12 4.4E-17 120.6 10.8 126 40-183 258-408 (450)
30 2b3t_A Protein methyltransfera 99.4 1.4E-11 4.7E-16 106.1 15.8 142 40-208 108-275 (276)
31 3mti_A RRNA methylase; SAM-dep 99.4 2E-12 6.8E-17 104.3 9.4 107 39-169 20-137 (185)
32 4dzr_A Protein-(glutamine-N5) 99.4 2.3E-12 7.9E-17 105.5 9.5 151 39-210 28-206 (215)
33 4gek_A TRNA (CMO5U34)-methyltr 99.4 2.2E-12 7.6E-17 110.8 9.4 102 39-170 68-181 (261)
34 4fzv_A Putative methyltransfer 99.3 1.3E-12 4.3E-17 117.2 8.1 123 40-182 147-302 (359)
35 1sqg_A SUN protein, FMU protei 99.3 7.6E-12 2.6E-16 114.7 13.4 125 40-183 245-393 (429)
36 3evz_A Methyltransferase; NYSG 99.3 9.2E-12 3.1E-16 103.8 11.8 132 39-192 53-205 (230)
37 3eey_A Putative rRNA methylase 99.3 1.1E-11 3.8E-16 100.8 12.1 109 39-169 20-141 (197)
38 4hg2_A Methyltransferase type 99.3 5.3E-12 1.8E-16 108.3 10.2 95 40-169 38-137 (257)
39 1dus_A MJ0882; hypothetical pr 99.3 6E-12 2E-16 101.2 9.8 118 40-191 51-181 (194)
40 3a27_A TYW2, uncharacterized p 99.3 1.8E-12 6E-17 111.9 6.4 135 39-210 117-268 (272)
41 3h2b_A SAM-dependent methyltra 99.3 1.6E-11 5.6E-16 100.2 11.7 136 41-212 41-198 (203)
42 3opn_A Putative hemolysin; str 99.3 8.4E-12 2.9E-16 105.4 10.2 157 19-208 15-201 (232)
43 3e05_A Precorrin-6Y C5,15-meth 99.3 2E-11 6.7E-16 100.1 11.9 110 40-184 39-160 (204)
44 3dli_A Methyltransferase; PSI- 99.3 7.7E-12 2.6E-16 105.1 9.3 109 34-172 34-145 (240)
45 1nt2_A Fibrillarin-like PRE-rR 99.3 7.3E-12 2.5E-16 104.0 8.9 98 39-167 55-161 (210)
46 3g5l_A Putative S-adenosylmeth 99.3 1.4E-11 4.7E-16 104.2 10.6 96 40-168 43-146 (253)
47 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.5E-11 5.3E-16 103.0 10.2 116 22-168 59-183 (233)
48 3p9n_A Possible methyltransfer 99.3 2.5E-11 8.6E-16 98.4 10.8 100 40-169 43-155 (189)
49 4fsd_A Arsenic methyltransfera 99.3 2.7E-11 9.2E-16 109.3 11.8 105 39-168 81-204 (383)
50 3dh0_A SAM dependent methyltra 99.3 2.8E-11 9.7E-16 99.8 10.6 120 40-190 36-179 (219)
51 2frn_A Hypothetical protein PH 99.2 1.5E-11 5.2E-16 106.3 8.9 113 39-189 123-253 (278)
52 3njr_A Precorrin-6Y methylase; 99.2 2.8E-11 9.6E-16 99.9 9.9 105 40-183 54-170 (204)
53 3ujc_A Phosphoethanolamine N-m 99.2 2.6E-11 8.8E-16 102.7 9.7 98 40-168 54-160 (266)
54 3mb5_A SAM-dependent methyltra 99.2 1.5E-11 5.2E-16 104.1 8.3 115 39-190 91-220 (255)
55 3hem_A Cyclopropane-fatty-acyl 99.2 4.3E-11 1.5E-15 104.1 10.8 103 39-172 70-188 (302)
56 3f4k_A Putative methyltransfer 99.2 2.9E-11 1E-15 102.1 9.3 99 36-168 41-151 (257)
57 3dtn_A Putative methyltransfer 99.2 1.9E-10 6.6E-15 95.8 14.0 103 39-172 42-153 (234)
58 3q87_B N6 adenine specific DNA 99.2 1.5E-10 5.1E-15 92.6 12.8 137 40-210 22-163 (170)
59 1yzh_A TRNA (guanine-N(7)-)-me 99.2 7E-11 2.4E-15 97.7 10.9 129 40-190 40-180 (214)
60 1nkv_A Hypothetical protein YJ 99.2 1.7E-10 6E-15 97.3 13.4 102 31-167 27-140 (256)
61 3hm2_A Precorrin-6Y C5,15-meth 99.2 6.2E-11 2.1E-15 94.4 10.0 108 40-183 24-143 (178)
62 3e23_A Uncharacterized protein 99.2 7.8E-11 2.7E-15 96.8 10.7 143 38-213 40-204 (211)
63 3ofk_A Nodulation protein S; N 99.2 1.9E-10 6.4E-15 94.8 13.0 119 40-190 50-186 (216)
64 2gb4_A Thiopurine S-methyltran 99.2 5.2E-11 1.8E-15 101.7 9.8 118 40-188 67-223 (252)
65 3adn_A Spermidine synthase; am 99.2 9E-11 3.1E-15 102.5 11.3 141 40-208 82-244 (294)
66 3e8s_A Putative SAM dependent 99.2 8.8E-11 3E-15 96.7 10.7 137 40-207 51-225 (227)
67 3cgg_A SAM-dependent methyltra 99.2 4.2E-10 1.4E-14 90.3 14.3 123 39-193 44-176 (195)
68 1vl5_A Unknown conserved prote 99.2 4.9E-11 1.7E-15 101.3 9.0 105 29-168 26-141 (260)
69 3grz_A L11 mtase, ribosomal pr 99.2 4.3E-11 1.5E-15 98.0 8.4 113 39-189 58-182 (205)
70 3fpf_A Mtnas, putative unchara 99.2 7.7E-11 2.6E-15 102.8 10.3 119 39-194 120-252 (298)
71 3ou2_A SAM-dependent methyltra 99.2 1.3E-10 4.6E-15 95.3 11.3 107 31-170 36-149 (218)
72 3vc1_A Geranyl diphosphate 2-C 99.2 1.4E-10 5E-15 101.3 12.1 102 33-168 109-222 (312)
73 1jsx_A Glucose-inhibited divis 99.2 5.7E-11 2E-15 97.2 9.0 109 41-188 65-184 (207)
74 3kkz_A Uncharacterized protein 99.2 7E-11 2.4E-15 100.8 9.9 99 36-168 41-151 (267)
75 3mgg_A Methyltransferase; NYSG 99.2 4.6E-11 1.6E-15 102.2 8.6 109 27-167 23-142 (276)
76 3l8d_A Methyltransferase; stru 99.2 1.1E-10 3.8E-15 97.6 10.8 97 39-169 51-155 (242)
77 2bm8_A Cephalosporin hydroxyla 99.2 2.3E-10 7.9E-15 96.6 12.8 97 41-167 81-187 (236)
78 3sso_A Methyltransferase; macr 99.2 1.6E-10 5.3E-15 104.6 12.1 103 40-168 215-325 (419)
79 2p7i_A Hypothetical protein; p 99.2 1.2E-10 4.1E-15 97.2 10.6 98 40-172 41-146 (250)
80 3hnr_A Probable methyltransfer 99.2 1.6E-10 5.3E-15 95.4 11.1 96 40-168 44-146 (220)
81 2fca_A TRNA (guanine-N(7)-)-me 99.2 5.1E-11 1.7E-15 98.9 8.1 105 40-167 37-153 (213)
82 3ggd_A SAM-dependent methyltra 99.2 4.2E-10 1.4E-14 94.5 13.7 107 38-171 53-167 (245)
83 2ex4_A Adrenal gland protein A 99.2 2.4E-10 8.2E-15 95.9 11.9 120 41-191 79-224 (241)
84 1kpg_A CFA synthase;, cyclopro 99.2 2.1E-10 7.2E-15 98.7 11.6 98 39-170 62-171 (287)
85 3bus_A REBM, methyltransferase 99.2 1.7E-10 5.8E-15 98.4 10.6 96 40-168 60-167 (273)
86 3u81_A Catechol O-methyltransf 99.1 1.2E-10 4.2E-15 96.8 9.4 118 40-183 57-186 (221)
87 1yb2_A Hypothetical protein TA 99.1 9.6E-11 3.3E-15 100.8 8.8 114 39-189 108-234 (275)
88 3orh_A Guanidinoacetate N-meth 99.1 2.2E-11 7.7E-16 102.7 4.7 101 40-166 59-169 (236)
89 1g8a_A Fibrillarin-like PRE-rR 99.1 1.5E-10 5.1E-15 96.3 9.7 99 39-167 71-178 (227)
90 1pjz_A Thiopurine S-methyltran 99.1 5.6E-11 1.9E-15 97.9 6.9 97 40-167 21-140 (203)
91 3sm3_A SAM-dependent methyltra 99.1 4.4E-10 1.5E-14 93.1 12.4 99 39-168 28-142 (235)
92 3pfg_A N-methyltransferase; N, 99.1 3.4E-10 1.2E-14 96.1 11.8 95 40-166 49-150 (263)
93 1xxl_A YCGJ protein; structura 99.1 1.3E-10 4.5E-15 97.6 9.1 96 40-169 20-126 (239)
94 3dxy_A TRNA (guanine-N(7)-)-me 99.1 7.1E-11 2.4E-15 98.6 7.4 122 40-182 33-165 (218)
95 3gjy_A Spermidine synthase; AP 99.1 3.1E-10 1.1E-14 99.9 11.7 123 43-191 91-227 (317)
96 2pxx_A Uncharacterized protein 99.1 1.8E-10 6.3E-15 94.1 9.7 110 39-171 40-163 (215)
97 3ccf_A Cyclopropane-fatty-acyl 99.1 1.7E-10 5.8E-15 99.1 9.7 98 40-172 56-159 (279)
98 2o57_A Putative sarcosine dime 99.1 1.8E-10 6.1E-15 99.6 9.9 97 39-168 80-188 (297)
99 3g5t_A Trans-aconitate 3-methy 99.1 1.6E-10 5.4E-15 100.3 9.5 102 40-167 35-149 (299)
100 2p35_A Trans-aconitate 2-methy 99.1 1.2E-10 4.2E-15 98.3 8.5 98 40-170 32-135 (259)
101 1ri5_A MRNA capping enzyme; me 99.1 1.3E-10 4.4E-15 100.0 8.8 102 39-169 62-176 (298)
102 2pwy_A TRNA (adenine-N(1)-)-me 99.1 8.8E-11 3E-15 99.2 7.5 113 39-187 94-219 (258)
103 2xvm_A Tellurite resistance pr 99.1 2.2E-10 7.6E-15 92.6 9.6 115 41-189 32-170 (199)
104 3tma_A Methyltransferase; thum 99.1 2.8E-10 9.5E-15 101.5 11.0 106 40-168 202-318 (354)
105 1xdz_A Methyltransferase GIDB; 99.1 1.7E-10 5.9E-15 97.1 9.2 94 40-166 69-173 (240)
106 4dcm_A Ribosomal RNA large sub 99.1 3.6E-10 1.2E-14 101.9 11.8 120 40-190 221-354 (375)
107 3ege_A Putative methyltransfer 99.1 3.2E-10 1.1E-14 96.6 10.7 95 40-169 33-132 (261)
108 3gu3_A Methyltransferase; alph 99.1 1.4E-10 4.7E-15 100.1 8.4 98 39-168 20-127 (284)
109 1xtp_A LMAJ004091AAA; SGPP, st 99.1 1.1E-09 3.7E-14 92.1 13.6 121 40-191 92-237 (254)
110 1i9g_A Hypothetical protein RV 99.1 1.9E-10 6.4E-15 98.7 8.9 115 39-189 97-227 (280)
111 1fbn_A MJ fibrillarin homologu 99.1 3.5E-10 1.2E-14 94.6 10.2 97 39-166 72-177 (230)
112 3r3h_A O-methyltransferase, SA 99.1 2.4E-10 8.1E-15 96.9 9.2 99 40-166 59-169 (242)
113 3dr5_A Putative O-methyltransf 99.1 7.7E-11 2.6E-15 98.6 6.0 93 42-166 57-162 (221)
114 4htf_A S-adenosylmethionine-de 99.1 3.6E-10 1.2E-14 97.2 10.3 97 40-169 67-175 (285)
115 3lcc_A Putative methyl chlorid 99.1 3.7E-10 1.3E-14 94.3 9.9 137 41-210 66-227 (235)
116 2fk8_A Methoxy mycolic acid sy 99.1 5.7E-10 1.9E-14 97.5 11.4 99 40-172 89-199 (318)
117 3dlc_A Putative S-adenosyl-L-m 99.1 5.5E-10 1.9E-14 91.4 10.6 94 40-167 43-148 (219)
118 1o54_A SAM-dependent O-methylt 99.1 1.8E-10 6.2E-15 99.0 7.9 114 40-190 111-237 (277)
119 1nv8_A HEMK protein; class I a 99.1 4.9E-10 1.7E-14 97.2 10.8 135 41-208 123-281 (284)
120 2b25_A Hypothetical protein; s 99.1 2.1E-10 7E-15 101.5 8.1 109 39-181 103-233 (336)
121 3i9f_A Putative type 11 methyl 99.1 4.5E-10 1.5E-14 89.0 9.2 114 40-191 16-147 (170)
122 2ift_A Putative methylase HI07 99.1 1.1E-10 3.6E-15 96.0 5.7 97 41-169 53-165 (201)
123 3dmg_A Probable ribosomal RNA 99.1 6.2E-10 2.1E-14 100.6 11.2 118 41-190 233-360 (381)
124 1zx0_A Guanidinoacetate N-meth 99.1 9.4E-11 3.2E-15 98.3 5.4 102 40-167 59-170 (236)
125 2zfu_A Nucleomethylin, cerebra 99.1 5.5E-10 1.9E-14 92.0 9.9 108 40-189 66-176 (215)
126 2yqz_A Hypothetical protein TT 99.1 7.4E-10 2.5E-14 93.5 11.0 95 38-166 36-140 (263)
127 3jwh_A HEN1; methyltransferase 99.1 7E-10 2.4E-14 91.5 10.5 98 40-167 28-141 (217)
128 3k6r_A Putative transferase PH 99.1 4.6E-10 1.6E-14 97.2 9.6 92 39-168 123-226 (278)
129 3g07_A 7SK snRNA methylphospha 99.1 6.6E-10 2.3E-14 96.5 10.6 104 41-166 46-219 (292)
130 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.7E-10 5.8E-15 97.4 6.5 121 40-182 45-183 (235)
131 1l3i_A Precorrin-6Y methyltran 99.1 3.1E-10 1.1E-14 90.9 7.7 112 39-189 31-156 (192)
132 1uir_A Polyamine aminopropyltr 99.1 6.3E-10 2.2E-14 97.9 10.4 158 40-225 76-258 (314)
133 2ih2_A Modification methylase 99.1 4.7E-09 1.6E-13 95.1 16.4 109 40-169 38-166 (421)
134 2nxc_A L11 mtase, ribosomal pr 99.1 5.4E-10 1.8E-14 95.2 9.6 114 39-190 118-242 (254)
135 3tfw_A Putative O-methyltransf 99.1 2.9E-10 9.9E-15 96.5 7.8 95 40-166 62-169 (248)
136 2b78_A Hypothetical protein SM 99.1 4.9E-10 1.7E-14 101.3 9.7 122 40-181 211-346 (385)
137 3duw_A OMT, O-methyltransferas 99.1 2.2E-10 7.6E-15 95.0 6.8 98 40-166 57-166 (223)
138 3m33_A Uncharacterized protein 99.0 2.7E-10 9.3E-15 94.9 7.2 110 40-189 47-164 (226)
139 3bkw_A MLL3908 protein, S-aden 99.0 6.5E-10 2.2E-14 92.8 9.5 96 40-168 42-145 (243)
140 2yvl_A TRMI protein, hypotheti 99.0 5.2E-10 1.8E-14 93.9 8.9 109 40-187 90-210 (248)
141 3ocj_A Putative exported prote 99.0 6E-10 2.1E-14 97.1 9.6 101 39-168 116-228 (305)
142 4dmg_A Putative uncharacterize 99.0 6.4E-10 2.2E-14 100.9 10.0 115 40-178 213-338 (393)
143 3bwc_A Spermidine synthase; SA 99.0 7.6E-10 2.6E-14 96.9 10.2 142 40-208 94-257 (304)
144 1p91_A Ribosomal RNA large sub 99.0 3.9E-10 1.3E-14 96.1 8.0 98 40-176 84-187 (269)
145 3bkx_A SAM-dependent methyltra 99.0 3.6E-09 1.2E-13 90.1 14.0 109 31-169 34-161 (275)
146 3g89_A Ribosomal RNA small sub 99.0 1.3E-10 4.4E-15 99.0 4.9 93 40-165 79-182 (249)
147 1i1n_A Protein-L-isoaspartate 99.0 2.1E-10 7.1E-15 95.3 6.1 94 39-169 75-184 (226)
148 2gs9_A Hypothetical protein TT 99.0 4.7E-10 1.6E-14 92.0 8.0 97 40-172 35-137 (211)
149 1ve3_A Hypothetical protein PH 99.0 7.7E-10 2.6E-14 91.4 9.3 97 40-168 37-143 (227)
150 3mq2_A 16S rRNA methyltransfer 99.0 8E-10 2.7E-14 91.2 9.2 100 40-167 26-140 (218)
151 2vdw_A Vaccinia virus capping 99.0 3.7E-10 1.3E-14 98.8 7.5 106 41-168 48-170 (302)
152 2p8j_A S-adenosylmethionine-de 99.0 5E-10 1.7E-14 91.5 7.8 100 40-170 22-131 (209)
153 3tr6_A O-methyltransferase; ce 99.0 3.8E-10 1.3E-14 93.6 7.1 99 40-166 63-173 (225)
154 1wxx_A TT1595, hypothetical pr 99.0 7.3E-10 2.5E-14 99.9 9.5 109 41-170 209-328 (382)
155 2yxd_A Probable cobalt-precorr 99.0 3E-10 1E-14 90.4 6.1 112 40-192 34-156 (183)
156 1y8c_A S-adenosylmethionine-de 99.0 1.3E-09 4.5E-14 90.8 10.3 95 41-167 37-142 (246)
157 3jwg_A HEN1, methyltransferase 99.0 6E-10 2.1E-14 91.9 7.9 98 40-167 28-141 (219)
158 3lbf_A Protein-L-isoaspartate 99.0 5.4E-10 1.9E-14 91.6 7.4 90 40-169 76-176 (210)
159 3d2l_A SAM-dependent methyltra 99.0 3.4E-09 1.2E-13 88.4 12.4 96 39-167 31-137 (243)
160 2igt_A SAM dependent methyltra 99.0 5.4E-10 1.8E-14 99.1 7.8 122 40-181 152-288 (332)
161 3v97_A Ribosomal RNA large sub 99.0 3E-10 1E-14 110.1 6.5 109 40-169 538-659 (703)
162 2kw5_A SLR1183 protein; struct 99.0 1.3E-09 4.3E-14 88.8 9.3 95 40-169 29-133 (202)
163 2vdv_E TRNA (guanine-N(7)-)-me 99.0 9.2E-10 3.2E-14 93.0 8.7 106 40-167 48-173 (246)
164 3ntv_A MW1564 protein; rossman 99.0 5.9E-10 2E-14 93.5 7.4 93 40-165 70-174 (232)
165 3q7e_A Protein arginine N-meth 99.0 8.2E-10 2.8E-14 98.5 8.7 96 40-165 65-171 (349)
166 1iy9_A Spermidine synthase; ro 99.0 7.5E-09 2.6E-13 89.3 14.5 124 41-191 75-217 (275)
167 3m70_A Tellurite resistance pr 99.0 5.1E-10 1.8E-14 96.3 6.9 95 41-168 120-224 (286)
168 3uwp_A Histone-lysine N-methyl 99.0 2.6E-09 8.8E-14 97.0 11.7 97 39-166 171-287 (438)
169 1inl_A Spermidine synthase; be 99.0 1.6E-09 5.4E-14 94.5 9.9 141 41-208 90-251 (296)
170 2esr_A Methyltransferase; stru 99.0 1.7E-09 5.9E-14 86.2 9.2 99 40-171 30-142 (177)
171 2qe6_A Uncharacterized protein 99.0 4.3E-09 1.5E-13 90.8 12.2 108 41-170 77-199 (274)
172 2a14_A Indolethylamine N-methy 99.0 5.5E-10 1.9E-14 95.4 6.3 127 40-191 54-237 (263)
173 2fpo_A Methylase YHHF; structu 99.0 9.4E-10 3.2E-14 90.4 7.3 96 41-169 54-162 (202)
174 1ws6_A Methyltransferase; stru 99.0 1.7E-09 5.8E-14 85.3 8.5 100 41-171 41-151 (171)
175 1dl5_A Protein-L-isoaspartate 99.0 8.6E-10 3E-14 96.9 7.4 93 39-168 73-176 (317)
176 3bxo_A N,N-dimethyltransferase 99.0 3.5E-09 1.2E-13 88.1 10.8 98 40-169 39-143 (239)
177 3cc8_A Putative methyltransfer 99.0 1.9E-09 6.6E-14 88.8 9.0 108 40-179 31-142 (230)
178 1wzn_A SAM-dependent methyltra 99.0 3.5E-09 1.2E-13 89.1 10.7 97 40-168 40-146 (252)
179 2pt6_A Spermidine synthase; tr 99.0 1.6E-09 5.4E-14 95.7 8.8 123 40-190 115-257 (321)
180 2as0_A Hypothetical protein PH 99.0 1.5E-09 5.2E-14 98.2 8.8 111 40-170 216-338 (396)
181 1o9g_A RRNA methyltransferase; 99.0 8.8E-10 3E-14 93.2 6.8 111 41-168 51-214 (250)
182 2fhp_A Methylase, putative; al 99.0 7.3E-10 2.5E-14 88.8 6.0 103 40-170 43-157 (187)
183 2pjd_A Ribosomal RNA small sub 99.0 2.2E-09 7.6E-14 95.3 9.6 117 41-189 196-322 (343)
184 2fyt_A Protein arginine N-meth 98.9 1.8E-09 6.2E-14 95.9 8.9 95 40-164 63-168 (340)
185 1mjf_A Spermidine synthase; sp 98.9 6.3E-09 2.2E-13 90.0 12.1 121 40-190 74-220 (281)
186 2yx1_A Hypothetical protein MJ 98.9 5.8E-10 2E-14 99.0 5.6 101 40-183 194-306 (336)
187 2i7c_A Spermidine synthase; tr 98.9 1.3E-09 4.4E-14 94.5 7.5 123 40-190 77-219 (283)
188 1sui_A Caffeoyl-COA O-methyltr 98.9 2.6E-09 8.9E-14 90.7 9.2 99 40-166 78-189 (247)
189 2h00_A Methyltransferase 10 do 98.9 1.4E-08 4.9E-13 85.8 13.5 132 41-190 65-236 (254)
190 3p2e_A 16S rRNA methylase; met 98.9 1.2E-09 4.1E-14 91.5 6.6 100 40-165 23-137 (225)
191 2aot_A HMT, histamine N-methyl 98.9 4.1E-09 1.4E-13 91.2 10.1 108 40-169 51-174 (292)
192 2i62_A Nicotinamide N-methyltr 98.9 2.6E-09 9E-14 90.2 8.6 126 40-190 55-237 (265)
193 3g2m_A PCZA361.24; SAM-depende 98.9 3.9E-09 1.3E-13 91.5 9.9 96 41-169 82-192 (299)
194 2yxe_A Protein-L-isoaspartate 98.9 2.1E-09 7E-14 88.5 7.7 92 40-168 76-178 (215)
195 3c0k_A UPF0064 protein YCCW; P 98.9 1.9E-09 6.5E-14 97.6 7.5 110 40-169 219-341 (396)
196 3r0q_C Probable protein argini 98.9 5.1E-09 1.8E-13 94.2 10.2 95 40-165 62-167 (376)
197 3thr_A Glycine N-methyltransfe 98.9 1.3E-09 4.4E-14 93.9 6.0 105 40-168 56-176 (293)
198 4hc4_A Protein arginine N-meth 98.9 5.2E-09 1.8E-13 94.3 10.1 93 41-164 83-186 (376)
199 3bgv_A MRNA CAP guanine-N7 met 98.9 2.2E-09 7.6E-14 93.7 7.4 106 40-170 33-158 (313)
200 2avd_A Catechol-O-methyltransf 98.9 3.3E-09 1.1E-13 88.0 8.0 99 40-166 68-178 (229)
201 2y1w_A Histone-arginine methyl 98.9 3E-09 1E-13 94.8 8.1 95 40-166 49-154 (348)
202 2gpy_A O-methyltransferase; st 98.9 5.5E-09 1.9E-13 87.2 9.0 95 40-166 53-159 (233)
203 1g6q_1 HnRNP arginine N-methyl 98.9 4.5E-09 1.5E-13 92.8 8.9 95 40-164 37-142 (328)
204 2o07_A Spermidine synthase; st 98.9 3.6E-09 1.2E-13 92.7 8.0 124 40-190 94-236 (304)
205 3c3y_A Pfomt, O-methyltransfer 98.9 4.5E-09 1.5E-13 88.5 8.1 99 40-166 69-180 (237)
206 1fp1_D Isoliquiritigenin 2'-O- 98.9 1.8E-08 6E-13 90.3 12.5 107 29-168 197-307 (372)
207 1r18_A Protein-L-isoaspartate( 98.9 1.1E-09 3.9E-14 91.1 4.4 99 39-169 82-196 (227)
208 2pbf_A Protein-L-isoaspartate 98.9 2.2E-09 7.6E-14 89.1 5.5 102 39-169 78-195 (227)
209 3c3p_A Methyltransferase; NP_9 98.8 1.9E-09 6.3E-14 88.7 4.9 93 40-166 55-159 (210)
210 2qm3_A Predicted methyltransfe 98.8 1.4E-08 4.8E-13 91.2 11.1 108 41-181 172-296 (373)
211 3gdh_A Trimethylguanosine synt 98.8 1.5E-10 5.1E-15 97.1 -1.8 90 41-165 78-179 (241)
212 2b2c_A Spermidine synthase; be 98.8 8.5E-09 2.9E-13 90.7 9.3 123 40-190 107-249 (314)
213 1vbf_A 231AA long hypothetical 98.8 3.3E-09 1.1E-13 88.2 6.4 89 40-168 69-166 (231)
214 3iv6_A Putative Zn-dependent a 98.8 1.3E-08 4.5E-13 87.3 9.8 103 39-170 43-151 (261)
215 1xj5_A Spermidine synthase 1; 98.8 5.3E-09 1.8E-13 92.8 7.5 120 40-186 119-258 (334)
216 2cmg_A Spermidine synthase; tr 98.8 7E-08 2.4E-12 82.7 14.3 109 41-191 72-199 (262)
217 2hnk_A SAM-dependent O-methylt 98.8 6.4E-09 2.2E-13 87.3 7.4 100 40-167 59-181 (239)
218 2avn_A Ubiquinone/menaquinone 98.8 5.8E-09 2E-13 88.6 6.7 96 40-169 53-154 (260)
219 1jg1_A PIMT;, protein-L-isoasp 98.8 4.3E-09 1.5E-13 88.1 5.6 90 40-169 90-191 (235)
220 2r3s_A Uncharacterized protein 98.8 1.2E-07 4E-12 83.1 14.9 108 30-168 153-272 (335)
221 3cbg_A O-methyltransferase; cy 98.8 4.7E-09 1.6E-13 88.0 5.5 97 40-166 71-181 (232)
222 2f8l_A Hypothetical protein LM 98.8 1E-08 3.6E-13 90.9 8.0 121 40-181 129-274 (344)
223 3kr9_A SAM-dependent methyltra 98.8 4.1E-08 1.4E-12 82.3 10.5 112 38-186 12-137 (225)
224 3reo_A (ISO)eugenol O-methyltr 98.8 1.6E-07 5.4E-12 84.1 14.8 105 31-168 193-301 (368)
225 3mcz_A O-methyltransferase; ad 98.8 5.1E-08 1.8E-12 86.3 11.4 109 31-168 169-288 (352)
226 1wy7_A Hypothetical protein PH 98.7 3.1E-08 1.1E-12 80.8 9.1 107 40-182 48-164 (207)
227 3lst_A CALO1 methyltransferase 98.7 6.2E-08 2.1E-12 85.9 11.1 104 31-168 175-287 (348)
228 2g72_A Phenylethanolamine N-me 98.7 4.8E-09 1.6E-13 90.5 3.7 125 41-189 71-253 (289)
229 3p9c_A Caffeic acid O-methyltr 98.7 2.2E-07 7.6E-12 83.1 14.6 105 31-168 191-299 (364)
230 3lec_A NADB-rossmann superfami 98.7 3.2E-08 1.1E-12 83.3 8.4 112 37-186 17-143 (230)
231 1x19_A CRTF-related protein; m 98.7 2E-07 6.7E-12 82.9 14.1 105 30-168 180-296 (359)
232 2ip2_A Probable phenazine-spec 98.7 2.4E-07 8.1E-12 81.4 14.4 103 31-168 159-273 (334)
233 1qzz_A RDMB, aclacinomycin-10- 98.7 1.3E-07 4.3E-12 84.3 12.9 96 40-168 181-288 (374)
234 3tm4_A TRNA (guanine N2-)-meth 98.7 1.5E-08 5.2E-13 91.0 6.5 103 40-168 216-330 (373)
235 1u2z_A Histone-lysine N-methyl 98.7 4.9E-08 1.7E-12 89.4 10.0 97 40-166 241-358 (433)
236 3bzb_A Uncharacterized protein 98.7 2.7E-07 9.1E-12 79.6 13.9 112 26-165 64-203 (281)
237 3i53_A O-methyltransferase; CO 98.7 2.2E-07 7.4E-12 81.7 13.6 104 31-168 160-275 (332)
238 3gnl_A Uncharacterized protein 98.7 2.8E-08 9.6E-13 84.3 7.4 112 37-185 17-142 (244)
239 1vlm_A SAM-dependent methyltra 98.7 4.8E-08 1.7E-12 80.6 8.6 91 41-169 47-141 (219)
240 3htx_A HEN1; HEN1, small RNA m 98.7 3.8E-08 1.3E-12 95.8 8.8 99 40-168 720-835 (950)
241 3axs_A Probable N(2),N(2)-dime 98.7 1.9E-08 6.4E-13 91.1 6.1 94 40-167 51-158 (392)
242 2qfm_A Spermine synthase; sper 98.7 6.1E-08 2.1E-12 86.6 9.2 130 41-189 188-339 (364)
243 1tw3_A COMT, carminomycin 4-O- 98.7 2.4E-07 8.1E-12 82.2 12.6 97 40-169 182-290 (360)
244 2dul_A N(2),N(2)-dimethylguano 98.7 3.1E-08 1.1E-12 89.3 6.8 91 41-166 47-163 (378)
245 1yub_A Ermam, rRNA methyltrans 98.7 1.4E-08 5E-13 85.7 4.3 96 40-165 28-143 (245)
246 3dp7_A SAM-dependent methyltra 98.7 1.5E-07 5E-12 84.1 11.1 99 40-168 178-288 (363)
247 1ne2_A Hypothetical protein TA 98.6 5.6E-08 1.9E-12 79.0 7.7 104 40-181 50-159 (200)
248 3b3j_A Histone-arginine methyl 98.6 2.9E-08 1E-12 92.2 6.7 95 40-166 157-262 (480)
249 3gwz_A MMCR; methyltransferase 98.6 6.4E-07 2.2E-11 80.1 14.7 105 30-168 192-308 (369)
250 1fp2_A Isoflavone O-methyltran 98.6 2E-07 6.7E-12 82.7 11.0 96 39-168 186-289 (352)
251 3giw_A Protein of unknown func 98.6 3.3E-07 1.1E-11 79.0 11.2 107 42-171 79-204 (277)
252 1af7_A Chemotaxis receptor met 98.6 5.7E-08 1.9E-12 83.9 6.1 99 41-165 105-250 (274)
253 4e2x_A TCAB9; kijanose, tetron 98.6 6.7E-08 2.3E-12 87.6 6.0 100 40-168 106-209 (416)
254 2h1r_A Dimethyladenosine trans 98.5 8.9E-08 3.1E-12 83.5 6.3 65 40-129 41-116 (299)
255 1zg3_A Isoflavanone 4'-O-methy 98.5 6E-07 2E-11 79.8 11.8 105 31-168 182-294 (358)
256 2okc_A Type I restriction enzy 98.5 1.7E-07 5.7E-12 86.1 8.3 120 40-168 170-308 (445)
257 3bt7_A TRNA (uracil-5-)-methyl 98.5 1.8E-07 6.1E-12 83.9 7.7 93 42-172 214-331 (369)
258 3fzg_A 16S rRNA methylase; met 98.5 3E-08 1E-12 81.0 2.1 92 39-165 47-150 (200)
259 2jjq_A Uncharacterized RNA met 98.5 6.1E-07 2.1E-11 82.0 11.0 88 39-166 288-386 (425)
260 1zq9_A Probable dimethyladenos 98.5 2.5E-07 8.6E-12 80.0 7.5 66 40-130 27-104 (285)
261 2ar0_A M.ecoki, type I restric 98.5 6.4E-07 2.2E-11 84.3 10.7 121 40-168 168-313 (541)
262 1qam_A ERMC' methyltransferase 98.4 5.1E-07 1.8E-11 76.3 7.8 66 40-129 29-104 (244)
263 3gru_A Dimethyladenosine trans 98.4 5.5E-07 1.9E-11 78.5 6.6 68 40-130 49-125 (295)
264 4a6d_A Hydroxyindole O-methylt 98.4 3E-06 1E-10 75.4 11.5 105 31-168 170-284 (353)
265 1uwv_A 23S rRNA (uracil-5-)-me 98.3 2.4E-06 8.4E-11 78.1 10.8 70 40-128 285-365 (433)
266 1m6y_A S-adenosyl-methyltransf 98.3 1.2E-06 4.1E-11 76.5 7.3 72 40-127 25-106 (301)
267 3s1s_A Restriction endonucleas 98.3 3.1E-06 1.1E-10 82.3 10.1 111 40-169 320-467 (878)
268 2k4m_A TR8_protein, UPF0146 pr 98.2 1.4E-05 4.8E-10 62.2 11.1 105 26-172 18-126 (153)
269 3k0b_A Predicted N6-adenine-sp 98.2 7.9E-06 2.7E-10 73.9 10.7 114 40-167 200-350 (393)
270 3ldu_A Putative methylase; str 98.2 7E-06 2.4E-10 74.0 9.9 114 40-167 194-344 (385)
271 3ldg_A Putative uncharacterize 98.2 1.2E-05 4E-10 72.5 10.9 114 40-167 193-343 (384)
272 3lkd_A Type I restriction-modi 98.1 2.7E-06 9.2E-11 80.0 5.9 114 40-168 220-359 (542)
273 2r6z_A UPF0341 protein in RSP 98.1 6.2E-07 2.1E-11 76.6 1.2 70 40-130 82-172 (258)
274 2oyr_A UPF0341 protein YHIQ; a 98.1 1.8E-06 6.1E-11 73.8 3.9 69 40-130 85-175 (258)
275 4azs_A Methyltransferase WBDD; 98.1 3.2E-06 1.1E-10 79.9 6.0 68 40-128 65-143 (569)
276 3ll7_A Putative methyltransfer 98.1 1.4E-06 4.7E-11 79.2 3.3 114 40-178 92-220 (410)
277 3tqs_A Ribosomal RNA small sub 98.1 2.2E-06 7.6E-11 73.0 4.2 69 40-128 28-105 (255)
278 3fut_A Dimethyladenosine trans 98.0 4.9E-06 1.7E-10 71.6 5.8 68 40-130 46-121 (271)
279 3trk_A Nonstructural polyprote 98.0 3.1E-05 1.1E-09 65.4 10.0 108 118-227 210-321 (324)
280 3o4f_A Spermidine synthase; am 98.0 9.3E-05 3.2E-09 64.2 12.5 153 41-221 83-257 (294)
281 3khk_A Type I restriction-modi 97.9 1.3E-05 4.6E-10 75.3 7.4 118 44-168 247-396 (544)
282 4gqb_A Protein arginine N-meth 97.9 6.3E-06 2.2E-10 78.6 4.6 96 42-164 358-464 (637)
283 3v97_A Ribosomal RNA large sub 97.9 3.7E-05 1.3E-09 74.4 9.7 118 40-167 189-347 (703)
284 2ld4_A Anamorsin; methyltransf 97.8 2.3E-05 7.7E-10 62.0 5.7 89 39-167 10-101 (176)
285 4gua_A Non-structural polyprot 97.8 0.00021 7E-09 66.3 12.3 124 118-245 220-348 (670)
286 3frh_A 16S rRNA methylase; met 97.8 3.9E-05 1.3E-09 64.8 7.0 91 40-165 104-204 (253)
287 2qy6_A UPF0209 protein YFCK; s 97.8 3.8E-05 1.3E-09 65.5 7.0 121 40-185 59-228 (257)
288 3ua3_A Protein arginine N-meth 97.8 1.6E-05 5.5E-10 76.2 4.3 111 42-164 410-531 (745)
289 3lcv_B Sisomicin-gentamicin re 97.7 1.6E-05 5.6E-10 67.8 3.9 94 40-165 131-234 (281)
290 1wg8_A Predicted S-adenosylmet 97.7 0.00012 4.1E-09 63.0 8.4 70 40-127 21-97 (285)
291 1qyr_A KSGA, high level kasuga 97.7 6.1E-05 2.1E-09 63.9 6.5 73 40-130 20-101 (252)
292 3uzu_A Ribosomal RNA small sub 97.7 2.6E-05 8.7E-10 67.3 4.0 73 40-128 41-123 (279)
293 3b5i_A S-adenosyl-L-methionine 97.6 0.00051 1.7E-08 61.6 11.2 123 42-169 53-227 (374)
294 3c6k_A Spermine synthase; sper 97.5 0.001 3.6E-08 59.5 12.0 130 41-191 205-358 (381)
295 3ufb_A Type I restriction-modi 97.5 0.00014 4.7E-09 68.2 6.5 125 40-168 216-363 (530)
296 3cvo_A Methyltransferase-like 97.5 0.00036 1.2E-08 57.3 8.2 109 40-180 29-168 (202)
297 3ftd_A Dimethyladenosine trans 97.4 6.8E-05 2.3E-09 63.5 3.3 69 40-129 30-105 (249)
298 3tka_A Ribosomal RNA small sub 97.4 0.00032 1.1E-08 61.8 7.2 73 40-127 56-136 (347)
299 2efj_A 3,7-dimethylxanthine me 97.4 0.0011 3.8E-08 59.5 10.8 123 42-169 53-227 (384)
300 1m6e_X S-adenosyl-L-methionnin 97.3 0.00043 1.5E-08 61.7 6.8 118 41-168 51-210 (359)
301 3g7u_A Cytosine-specific methy 97.0 0.00094 3.2E-08 59.9 6.6 101 43-160 3-113 (376)
302 2wk1_A NOVP; transferase, O-me 96.9 0.0029 9.8E-08 54.5 8.0 98 42-166 107-243 (282)
303 3iyl_W VP1; non-enveloped viru 96.5 0.0083 2.8E-07 59.8 9.4 98 115-216 570-669 (1299)
304 2zig_A TTHA0409, putative modi 96.0 0.0075 2.6E-07 51.9 5.3 70 93-168 20-98 (297)
305 1g55_A DNA cytosine methyltran 95.9 0.0037 1.3E-07 55.2 2.9 70 43-129 3-78 (343)
306 1i4w_A Mitochondrial replicati 95.8 0.023 7.8E-07 50.4 7.5 54 41-107 58-119 (353)
307 1boo_A Protein (N-4 cytosine-s 95.8 0.013 4.3E-07 51.2 5.7 70 94-169 14-86 (323)
308 1ej6_A Lambda2; icosahedral, n 95.7 0.025 8.5E-07 56.2 8.0 112 97-218 554-667 (1289)
309 3iht_A S-adenosyl-L-methionine 95.5 0.14 4.7E-06 40.0 10.1 100 43-165 42-145 (174)
310 4e4y_A Short chain dehydrogena 95.2 0.5 1.7E-05 38.7 13.5 115 41-166 3-125 (244)
311 2dph_A Formaldehyde dismutase; 95.2 0.024 8.1E-07 50.6 5.5 105 39-165 183-297 (398)
312 2zig_A TTHA0409, putative modi 95.0 0.015 5.2E-07 50.0 3.6 35 40-89 234-268 (297)
313 1g60_A Adenine-specific methyl 94.9 0.047 1.6E-06 45.9 6.3 66 96-167 6-74 (260)
314 2qrv_A DNA (cytosine-5)-methyl 94.7 0.047 1.6E-06 47.1 6.0 145 40-206 14-179 (295)
315 1pqw_A Polyketide synthase; ro 94.6 0.065 2.2E-06 42.6 6.3 96 39-165 36-135 (198)
316 1f8f_A Benzyl alcohol dehydrog 94.6 0.064 2.2E-06 47.2 6.7 95 39-166 188-288 (371)
317 3vyw_A MNMC2; tRNA wobble urid 94.5 0.074 2.5E-06 46.2 6.7 121 41-191 96-246 (308)
318 4h0n_A DNMT2; SAH binding, tra 94.4 0.025 8.5E-07 49.7 3.6 70 43-129 4-79 (333)
319 1pl8_A Human sorbitol dehydrog 94.4 0.091 3.1E-06 46.0 7.2 95 39-166 169-272 (356)
320 3m6i_A L-arabinitol 4-dehydrog 94.4 0.19 6.7E-06 43.9 9.3 98 39-166 177-282 (363)
321 2c7p_A Modification methylase 94.2 0.031 1.1E-06 48.9 3.8 66 42-130 11-82 (327)
322 3ubt_Y Modification methylase 94.1 0.064 2.2E-06 46.4 5.6 64 43-128 1-70 (331)
323 3uko_A Alcohol dehydrogenase c 94.0 0.38 1.3E-05 42.4 10.5 95 39-166 191-294 (378)
324 3qv2_A 5-cytosine DNA methyltr 94.0 0.04 1.4E-06 48.3 4.0 72 41-130 9-87 (327)
325 1e3j_A NADP(H)-dependent ketos 93.9 0.11 3.9E-06 45.3 6.8 95 39-166 166-270 (352)
326 1kol_A Formaldehyde dehydrogen 93.8 0.085 2.9E-06 46.9 5.9 105 39-165 183-298 (398)
327 3fpc_A NADP-dependent alcohol 93.8 0.09 3.1E-06 45.9 5.9 96 39-166 164-265 (352)
328 1eg2_A Modification methylase 93.6 0.039 1.3E-06 48.1 3.1 65 96-168 40-107 (319)
329 1p0f_A NADP-dependent alcohol 93.5 0.47 1.6E-05 41.6 10.1 95 39-166 189-292 (373)
330 3jv7_A ADH-A; dehydrogenase, n 93.3 0.18 6.1E-06 43.8 7.0 95 39-166 169-269 (345)
331 2oo3_A Protein involved in cat 93.3 0.079 2.7E-06 45.4 4.4 95 42-165 92-196 (283)
332 3me5_A Cytosine-specific methy 93.2 0.16 5.4E-06 46.9 6.7 72 42-129 88-179 (482)
333 3s2e_A Zinc-containing alcohol 93.1 0.17 5.9E-06 43.8 6.6 93 39-166 164-262 (340)
334 1e3i_A Alcohol dehydrogenase, 93.1 0.54 1.9E-05 41.2 9.9 95 39-165 193-295 (376)
335 3tos_A CALS11; methyltransfera 93.0 0.97 3.3E-05 38.1 10.8 61 93-168 158-218 (257)
336 1cdo_A Alcohol dehydrogenase; 92.9 0.6 2.1E-05 40.9 9.9 96 39-166 190-293 (374)
337 3uog_A Alcohol dehydrogenase; 92.9 0.14 4.7E-06 45.0 5.7 94 39-166 187-286 (363)
338 3gms_A Putative NADPH:quinone 92.9 0.39 1.4E-05 41.5 8.5 95 39-166 142-242 (340)
339 3ek2_A Enoyl-(acyl-carrier-pro 92.9 0.87 3E-05 37.5 10.4 116 40-166 12-152 (271)
340 2h7i_A Enoyl-[acyl-carrier-pro 92.8 0.46 1.6E-05 39.6 8.7 115 41-166 6-147 (269)
341 2jhf_A Alcohol dehydrogenase E 92.8 0.67 2.3E-05 40.6 10.1 95 39-166 189-292 (374)
342 2dq4_A L-threonine 3-dehydroge 92.7 0.38 1.3E-05 41.7 8.2 92 41-166 164-261 (343)
343 4ej6_A Putative zinc-binding d 92.6 0.2 6.7E-06 44.2 6.2 97 39-166 180-283 (370)
344 2pzm_A Putative nucleotide sug 92.5 2.7 9.4E-05 35.6 13.4 74 41-129 19-98 (330)
345 2fzw_A Alcohol dehydrogenase c 92.4 0.69 2.4E-05 40.5 9.6 95 39-166 188-291 (373)
346 1dhr_A Dihydropteridine reduct 92.3 1.5 5.1E-05 35.6 10.9 114 41-166 6-132 (241)
347 1g60_A Adenine-specific methyl 92.2 0.1 3.5E-06 43.8 3.8 35 40-89 211-245 (260)
348 3k31_A Enoyl-(acyl-carrier-pro 92.2 1.3 4.4E-05 37.5 10.8 116 41-167 29-168 (296)
349 4eez_A Alcohol dehydrogenase 1 92.2 0.33 1.1E-05 42.0 7.1 96 39-166 161-262 (348)
350 2pd4_A Enoyl-[acyl-carrier-pro 92.1 1.4 4.8E-05 36.6 10.8 78 41-129 5-94 (275)
351 2b5w_A Glucose dehydrogenase; 91.8 0.23 8E-06 43.3 5.8 92 40-166 165-272 (357)
352 2eih_A Alcohol dehydrogenase; 91.6 0.37 1.3E-05 41.8 6.7 94 39-165 164-263 (343)
353 1rpn_A GDP-mannose 4,6-dehydra 91.5 1.3 4.3E-05 37.6 10.1 75 40-129 12-96 (335)
354 3d7l_A LIN1944 protein; APC893 91.4 2 6.9E-05 33.5 10.5 65 43-129 4-68 (202)
355 3ip1_A Alcohol dehydrogenase, 91.3 0.67 2.3E-05 41.2 8.3 99 39-166 211-317 (404)
356 3grk_A Enoyl-(acyl-carrier-pro 91.3 1.2 4.3E-05 37.5 9.6 116 41-167 30-169 (293)
357 3dqp_A Oxidoreductase YLBE; al 91.2 2.1 7.2E-05 34.0 10.6 71 43-130 1-74 (219)
358 2pk3_A GDP-6-deoxy-D-LYXO-4-he 91.1 2 6.8E-05 36.1 10.8 77 38-129 8-84 (321)
359 1vj0_A Alcohol dehydrogenase, 91.0 0.46 1.6E-05 41.9 6.8 94 39-166 193-297 (380)
360 1ooe_A Dihydropteridine reduct 90.9 1.8 6.2E-05 34.9 10.0 113 42-166 3-128 (236)
361 4id9_A Short-chain dehydrogena 90.8 2.2 7.4E-05 36.4 10.9 70 41-129 18-87 (347)
362 2p91_A Enoyl-[acyl-carrier-pro 90.8 2.3 8E-05 35.4 10.8 78 41-129 20-109 (285)
363 1rjw_A ADH-HT, alcohol dehydro 90.7 0.52 1.8E-05 40.8 6.8 93 39-165 162-259 (339)
364 2py6_A Methyltransferase FKBM; 90.6 0.28 9.4E-06 44.1 5.1 37 40-88 225-262 (409)
365 1qsg_A Enoyl-[acyl-carrier-pro 90.5 1.4 4.8E-05 36.4 9.1 78 41-129 8-97 (265)
366 2hcy_A Alcohol dehydrogenase 1 90.5 0.46 1.6E-05 41.2 6.2 97 39-166 167-268 (347)
367 2d8a_A PH0655, probable L-thre 90.4 0.46 1.6E-05 41.2 6.2 92 41-166 167-266 (348)
368 1uay_A Type II 3-hydroxyacyl-C 90.3 5.9 0.0002 31.6 12.7 74 42-129 2-76 (242)
369 3enk_A UDP-glucose 4-epimerase 90.3 2.7 9.4E-05 35.6 11.0 74 41-129 4-88 (341)
370 2q1w_A Putative nucleotide sug 90.2 4 0.00014 34.7 12.0 74 41-129 20-99 (333)
371 3two_A Mannitol dehydrogenase; 90.1 0.92 3.2E-05 39.3 7.9 86 39-166 174-264 (348)
372 3uce_A Dehydrogenase; rossmann 90.0 4.6 0.00016 32.2 11.7 101 42-166 6-115 (223)
373 1uuf_A YAHK, zinc-type alcohol 89.7 0.56 1.9E-05 41.2 6.2 90 39-165 192-286 (369)
374 4b79_A PA4098, probable short- 89.7 6.7 0.00023 32.4 12.5 75 41-129 10-88 (242)
375 2h6e_A ADH-4, D-arabinose 1-de 89.5 0.22 7.4E-06 43.3 3.3 90 41-166 170-268 (344)
376 2wyu_A Enoyl-[acyl carrier pro 89.5 1.7 5.7E-05 35.8 8.7 78 41-129 7-96 (261)
377 3oig_A Enoyl-[acyl-carrier-pro 89.4 6.6 0.00022 32.1 12.4 116 41-167 6-147 (266)
378 1wma_A Carbonyl reductase [NAD 89.4 1.6 5.4E-05 35.7 8.5 115 41-166 3-137 (276)
379 1yb5_A Quinone oxidoreductase; 89.3 0.84 2.9E-05 39.7 7.0 96 39-165 168-267 (351)
380 3ruf_A WBGU; rossmann fold, UD 89.2 1.6 5.3E-05 37.4 8.6 71 41-128 24-109 (351)
381 1v3u_A Leukotriene B4 12- hydr 89.1 0.6 2.1E-05 40.1 5.9 96 39-166 143-243 (333)
382 3vtz_A Glucose 1-dehydrogenase 89.1 4.1 0.00014 33.8 10.9 77 41-129 13-91 (269)
383 1db3_A GDP-mannose 4,6-dehydra 89.0 6.2 0.00021 33.7 12.4 72 43-129 2-88 (372)
384 4eye_A Probable oxidoreductase 88.9 1 3.5E-05 39.0 7.3 93 39-166 157-256 (342)
385 2z1m_A GDP-D-mannose dehydrata 88.9 4.2 0.00014 34.3 11.1 73 42-129 3-85 (345)
386 4b7c_A Probable oxidoreductase 88.8 0.86 2.9E-05 39.2 6.7 93 39-166 147-247 (336)
387 1vpt_A VP39; RNA CAP, poly(A) 88.8 8.7 0.0003 33.3 12.6 148 41-208 75-229 (348)
388 4egb_A DTDP-glucose 4,6-dehydr 88.4 3.5 0.00012 35.0 10.3 76 41-129 23-108 (346)
389 3jyn_A Quinone oxidoreductase; 88.1 0.57 2E-05 40.2 5.1 95 39-166 138-238 (325)
390 3qwb_A Probable quinone oxidor 88.1 0.63 2.1E-05 40.1 5.3 94 39-166 146-246 (334)
391 3sxp_A ADP-L-glycero-D-mannohe 87.9 7.8 0.00027 33.2 12.3 75 41-129 9-100 (362)
392 3pxx_A Carveol dehydrogenase; 87.5 6 0.00021 32.6 11.0 114 41-166 9-152 (287)
393 3rft_A Uronate dehydrogenase; 87.4 6.1 0.00021 32.4 10.9 70 43-129 4-74 (267)
394 1qor_A Quinone oxidoreductase; 87.4 0.54 1.8E-05 40.3 4.4 94 39-166 138-238 (327)
395 4fs3_A Enoyl-[acyl-carrier-pro 87.2 8.4 0.00029 31.6 11.7 114 41-167 5-146 (256)
396 1wly_A CAAR, 2-haloacrylate re 87.0 1 3.5E-05 38.7 6.0 95 39-166 143-243 (333)
397 1rkx_A CDP-glucose-4,6-dehydra 87.0 3.4 0.00012 35.3 9.4 73 41-128 8-89 (357)
398 3mag_A VP39; methylated adenin 86.8 12 0.00042 32.0 12.3 151 41-210 60-216 (307)
399 3ijr_A Oxidoreductase, short c 86.7 10 0.00035 31.7 12.1 114 41-166 46-181 (291)
400 4h15_A Short chain alcohol deh 86.5 9.8 0.00033 31.6 11.7 76 41-128 10-87 (261)
401 2ggs_A 273AA long hypothetical 86.5 6.8 0.00023 31.8 10.7 66 44-129 2-67 (273)
402 2cdc_A Glucose dehydrogenase g 86.4 0.65 2.2E-05 40.6 4.5 89 42-166 181-277 (366)
403 2dtx_A Glucose 1-dehydrogenase 86.3 13 0.00043 30.6 12.7 75 42-129 8-84 (264)
404 1jvb_A NAD(H)-dependent alcoho 86.3 0.81 2.8E-05 39.6 5.0 94 39-165 168-269 (347)
405 1yo6_A Putative carbonyl reduc 86.1 6.2 0.00021 31.5 10.1 76 42-129 3-91 (250)
406 3orf_A Dihydropteridine reduct 86.0 12 0.00042 30.2 12.0 111 42-166 22-143 (251)
407 3gem_A Short chain dehydrogena 86.0 5.5 0.00019 32.8 9.9 78 41-130 26-110 (260)
408 3dhn_A NAD-dependent epimerase 85.9 3.4 0.00012 32.7 8.3 70 43-129 5-77 (227)
409 3dii_A Short-chain dehydrogena 85.9 5.8 0.0002 32.2 9.9 75 43-129 3-85 (247)
410 2j3h_A NADP-dependent oxidored 85.8 0.87 3E-05 39.2 4.9 95 39-165 153-253 (345)
411 3e03_A Short chain dehydrogena 85.4 14 0.00047 30.4 12.2 77 41-129 5-100 (274)
412 1gy8_A UDP-galactose 4-epimera 85.2 8 0.00028 33.4 11.0 74 42-129 2-103 (397)
413 1fmc_A 7 alpha-hydroxysteroid 85.0 7.4 0.00025 31.3 10.1 77 41-129 10-98 (255)
414 2j8z_A Quinone oxidoreductase; 85.0 1.1 3.9E-05 38.8 5.3 97 39-166 160-260 (354)
415 2fwm_X 2,3-dihydro-2,3-dihydro 85.0 14 0.00048 29.9 12.5 77 41-129 6-84 (250)
416 1ek6_A UDP-galactose 4-epimera 84.9 5.5 0.00019 33.7 9.6 72 43-129 3-91 (348)
417 3r1i_A Short-chain type dehydr 84.8 6 0.00021 32.9 9.6 77 41-129 31-119 (276)
418 4e6p_A Probable sorbitol dehyd 84.7 5.7 0.00019 32.5 9.3 77 41-129 7-92 (259)
419 2q1s_A Putative nucleotide sug 84.5 4.1 0.00014 35.3 8.7 72 41-129 31-109 (377)
420 2c5a_A GDP-mannose-3', 5'-epim 84.4 12 0.00041 32.3 11.8 72 41-129 28-103 (379)
421 4eso_A Putative oxidoreductase 84.4 4.1 0.00014 33.4 8.3 114 41-166 7-137 (255)
422 3v2g_A 3-oxoacyl-[acyl-carrier 84.4 14 0.00049 30.4 11.8 114 41-166 30-164 (271)
423 3is3_A 17BETA-hydroxysteroid d 84.4 9.7 0.00033 31.3 10.7 114 41-166 17-151 (270)
424 4fgs_A Probable dehydrogenase 84.3 6 0.00021 33.3 9.4 114 41-166 28-158 (273)
425 3sx2_A Putative 3-ketoacyl-(ac 84.3 12 0.00041 30.8 11.2 78 41-130 12-113 (278)
426 3gpi_A NAD-dependent epimerase 84.0 1.6 5.4E-05 36.3 5.6 70 42-128 3-72 (286)
427 4dvj_A Putative zinc-dependent 84.0 3.6 0.00012 35.8 8.1 92 41-165 171-268 (363)
428 2hun_A 336AA long hypothetical 83.7 9.2 0.00032 32.1 10.5 73 42-129 3-85 (336)
429 3ksu_A 3-oxoacyl-acyl carrier 83.7 8.2 0.00028 31.7 9.9 114 41-166 10-146 (262)
430 4a2c_A Galactitol-1-phosphate 83.7 4 0.00014 34.9 8.2 95 40-166 159-259 (346)
431 3r3s_A Oxidoreductase; structu 83.5 12 0.00041 31.3 11.0 114 41-166 48-184 (294)
432 4gkb_A 3-oxoacyl-[acyl-carrier 83.4 18 0.00062 29.9 12.3 75 41-129 6-93 (258)
433 3goh_A Alcohol dehydrogenase, 83.4 1.2 4.1E-05 37.9 4.7 84 39-166 140-228 (315)
434 3ehe_A UDP-glucose 4-epimerase 83.4 14 0.00049 30.6 11.5 66 44-128 3-72 (313)
435 1sby_A Alcohol dehydrogenase; 83.4 4.6 0.00016 32.8 8.1 77 41-129 4-94 (254)
436 3gdg_A Probable NADP-dependent 83.3 13 0.00043 30.3 10.9 78 41-129 19-111 (267)
437 3tjr_A Short chain dehydrogena 83.3 5.3 0.00018 33.6 8.7 78 41-130 30-119 (301)
438 3gaz_A Alcohol dehydrogenase s 82.9 1.3 4.3E-05 38.4 4.6 91 39-165 148-244 (343)
439 2c20_A UDP-glucose 4-epimerase 82.8 9.4 0.00032 32.0 10.2 71 44-129 3-77 (330)
440 2v6g_A Progesterone 5-beta-red 82.6 21 0.00072 30.1 13.2 72 43-129 2-82 (364)
441 2o23_A HADH2 protein; HSD17B10 82.6 11 0.00039 30.4 10.3 77 41-129 11-96 (265)
442 1hdo_A Biliverdin IX beta redu 82.5 6.6 0.00023 30.2 8.5 70 43-129 4-77 (206)
443 1jtv_A 17 beta-hydroxysteroid 82.4 15 0.0005 31.4 11.3 76 42-129 2-93 (327)
444 2ydy_A Methionine adenosyltran 82.4 5.4 0.00019 33.3 8.4 69 42-129 2-70 (315)
445 1sb8_A WBPP; epimerase, 4-epim 82.3 6.5 0.00022 33.5 9.1 72 41-129 26-112 (352)
446 3gaf_A 7-alpha-hydroxysteroid 82.1 9.3 0.00032 31.2 9.6 77 41-129 11-99 (256)
447 2nm0_A Probable 3-oxacyl-(acyl 81.8 20 0.00067 29.2 12.1 75 42-129 21-97 (253)
448 3pvc_A TRNA 5-methylaminomethy 81.8 2.6 8.8E-05 40.2 6.7 45 41-89 58-105 (689)
449 1i24_A Sulfolipid biosynthesis 81.5 4.7 0.00016 35.0 7.9 79 36-129 5-110 (404)
450 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.3 5.4 0.00018 32.5 7.9 77 41-129 20-109 (274)
451 3guy_A Short-chain dehydrogena 81.1 13 0.00044 29.6 10.0 73 44-129 3-82 (230)
452 2dkn_A 3-alpha-hydroxysteroid 81.0 5.4 0.00019 32.0 7.7 70 44-129 3-72 (255)
453 3nyw_A Putative oxidoreductase 80.8 13 0.00043 30.3 10.0 78 41-130 6-98 (250)
454 3gvc_A Oxidoreductase, probabl 80.8 16 0.00053 30.3 10.7 77 41-129 28-113 (277)
455 3awd_A GOX2181, putative polyo 80.6 14 0.00047 29.8 10.1 77 41-129 12-100 (260)
456 3fwz_A Inner membrane protein 80.6 2.5 8.6E-05 31.3 5.1 95 43-168 8-106 (140)
457 4dup_A Quinone oxidoreductase; 80.4 2 6.8E-05 37.3 5.0 93 39-166 165-264 (353)
458 1fjh_A 3alpha-hydroxysteroid d 80.4 5.2 0.00018 32.4 7.4 70 44-129 3-72 (257)
459 1sny_A Sniffer CG10964-PA; alp 80.2 16 0.00054 29.6 10.4 77 41-129 20-112 (267)
460 2gdz_A NAD+-dependent 15-hydro 80.1 5.4 0.00019 32.7 7.5 77 41-129 6-96 (267)
461 3ay3_A NAD-dependent epimerase 80.1 11 0.00038 30.6 9.4 69 44-129 4-73 (267)
462 2zb4_A Prostaglandin reductase 80.1 2.6 8.8E-05 36.5 5.7 95 39-165 156-258 (357)
463 3p19_A BFPVVD8, putative blue 80.0 23 0.0008 29.0 11.5 76 42-129 16-97 (266)
464 1xu9_A Corticosteroid 11-beta- 80.0 7.6 0.00026 32.2 8.4 74 41-126 27-113 (286)
465 3nzo_A UDP-N-acetylglucosamine 80.0 9.8 0.00033 33.5 9.5 74 41-129 34-122 (399)
466 3ew7_A LMO0794 protein; Q8Y8U8 79.9 12 0.0004 29.2 9.2 67 44-129 2-71 (221)
467 2c0c_A Zinc binding alcohol de 79.9 4.6 0.00016 35.1 7.2 94 39-166 161-260 (362)
468 1iz0_A Quinone oxidoreductase; 79.9 2.5 8.4E-05 35.7 5.4 87 39-165 123-216 (302)
469 3ucx_A Short chain dehydrogena 79.8 17 0.00058 29.7 10.5 76 41-128 10-97 (264)
470 2jah_A Clavulanic acid dehydro 79.8 18 0.0006 29.2 10.5 76 42-129 7-94 (247)
471 2cfc_A 2-(R)-hydroxypropyl-COM 79.7 17 0.00059 29.0 10.4 76 42-129 2-90 (250)
472 1w6u_A 2,4-dienoyl-COA reducta 79.6 11 0.00039 31.2 9.5 77 41-129 25-114 (302)
473 2hrz_A AGR_C_4963P, nucleoside 79.5 5.8 0.0002 33.5 7.7 73 41-129 13-96 (342)
474 1h5q_A NADP-dependent mannitol 79.3 16 0.00054 29.5 10.1 77 41-129 13-102 (265)
475 1t2a_A GDP-mannose 4,6 dehydra 79.3 9.4 0.00032 32.8 9.1 72 43-129 25-112 (375)
476 3llv_A Exopolyphosphatase-rela 79.3 3.2 0.00011 30.5 5.2 68 42-126 6-77 (141)
477 3tpc_A Short chain alcohol deh 79.3 23 0.0008 28.6 12.5 77 41-129 6-91 (257)
478 1yb1_A 17-beta-hydroxysteroid 79.2 12 0.00042 30.6 9.5 77 41-129 30-118 (272)
479 1n2s_A DTDP-4-, DTDP-glucose o 79.2 17 0.00057 29.8 10.4 63 44-129 2-64 (299)
480 3o38_A Short chain dehydrogena 79.1 24 0.00082 28.6 11.5 77 41-129 21-111 (266)
481 2gn4_A FLAA1 protein, UDP-GLCN 79.0 4 0.00014 35.1 6.5 72 41-129 20-101 (344)
482 1yxm_A Pecra, peroxisomal tran 78.9 13 0.00044 30.9 9.6 76 42-129 18-110 (303)
483 3rd5_A Mypaa.01249.C; ssgcid, 78.8 7.9 0.00027 32.2 8.2 75 41-129 15-96 (291)
484 3fbg_A Putative arginate lyase 78.7 4.5 0.00015 34.8 6.8 89 41-165 150-246 (346)
485 1yde_A Retinal dehydrogenase/r 78.7 14 0.00049 30.3 9.7 77 41-129 8-92 (270)
486 2x4g_A Nucleoside-diphosphate- 78.6 20 0.0007 29.9 10.9 71 42-129 13-87 (342)
487 3nrc_A Enoyl-[acyl-carrier-pro 78.6 14 0.00049 30.4 9.7 78 41-129 25-113 (280)
488 1g0o_A Trihydroxynaphthalene r 78.5 13 0.00046 30.6 9.5 114 41-166 28-162 (283)
489 1n7h_A GDP-D-mannose-4,6-dehyd 78.3 8.6 0.00029 33.1 8.5 72 43-129 29-116 (381)
490 3kvo_A Hydroxysteroid dehydrog 78.2 32 0.0011 29.6 13.0 77 41-129 44-139 (346)
491 3slg_A PBGP3 protein; structur 78.2 6.3 0.00022 33.8 7.6 71 42-128 24-100 (372)
492 1spx_A Short-chain reductase f 78.2 9.5 0.00032 31.3 8.4 76 42-129 6-96 (278)
493 3sc4_A Short chain dehydrogena 78.1 28 0.00095 28.8 12.8 77 41-129 8-103 (285)
494 3uve_A Carveol dehydrogenase ( 78.1 27 0.00093 28.7 11.9 77 41-129 10-114 (286)
495 3abi_A Putative uncharacterize 78.1 5.8 0.0002 34.5 7.3 68 41-127 15-85 (365)
496 3slk_A Polyketide synthase ext 78.0 4.8 0.00016 39.2 7.3 93 39-165 343-440 (795)
497 3gqv_A Enoyl reductase; medium 77.9 9.9 0.00034 33.0 8.8 91 40-165 163-261 (371)
498 3h2s_A Putative NADH-flavin re 77.7 9.9 0.00034 29.8 8.1 68 44-130 2-73 (224)
499 3m2p_A UDP-N-acetylglucosamine 77.7 25 0.00085 29.1 11.1 69 43-129 3-72 (311)
500 3svt_A Short-chain type dehydr 77.6 10 0.00035 31.3 8.5 77 41-129 10-101 (281)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=100.00 E-value=1.1e-40 Score=275.63 Aligned_cols=181 Identities=28% Similarity=0.391 Sum_probs=156.9
Q ss_pred HhccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceE
Q 025715 18 EEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQ 97 (249)
Q Consensus 18 ~~~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~ 97 (249)
++||++||+|||.||+++|+++++|.+|||||||||+|+++++++ + ++|+|+|++++..++++++
T Consensus 2 ~~~yr~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~--------------~~V~gvD~~~~~~~~~v~~ 66 (191)
T 3dou_A 2 SLQLRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-A--------------RKIISIDLQEMEEIAGVRF 66 (191)
T ss_dssp --CTTSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-C--------------SEEEEEESSCCCCCTTCEE
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-C--------------CcEEEEeccccccCCCeEE
Confidence 689999999999999999999999999999999999999999876 3 7999999999988889999
Q ss_pred eecCCCChhhHHHHHHhcC---CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHH
Q 025715 98 VQGDITNARTAEVVIRHFD---GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS 174 (249)
Q Consensus 98 ~~gDi~~~~~~~~i~~~~~---~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~ 174 (249)
+++|+++......+.+.+. .++||+|+||++++++|.+..++.....++..++..+.++|||||+|++++|.++...
T Consensus 67 ~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~ 146 (191)
T 3dou_A 67 IRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTN 146 (191)
T ss_dssp EECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHH
T ss_pred EEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHH
Confidence 9999999876665555443 1389999999999999888777777788889999999999999999999999999888
Q ss_pred HHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCC
Q 025715 175 LLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPE 213 (249)
Q Consensus 175 ~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~ 213 (249)
++...++.+|..|.++||.+||+.|+|+|+||+||+...
T Consensus 147 ~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~~~~~ 185 (191)
T 3dou_A 147 DFIAIWRKNFSSYKISKPPASRGSSSEIYIMFFGFKAEG 185 (191)
T ss_dssp HHHHHHGGGEEEEEEECC------CCEEEEEEEEECCC-
T ss_pred HHHHHHHHhcCEEEEECCCCccCCCceEEEEEeeecccc
Confidence 999999999999999999999999999999999999864
No 2
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=100.00 E-value=6.7e-36 Score=252.96 Aligned_cols=189 Identities=21% Similarity=0.156 Sum_probs=146.1
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHH--hcCCCCCCCCCCCCCCCeEEEec--CCCCCCC-CC
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRK--LYLPAKLSPDSREGDLPLIVAID--LQPMAPI-EG 94 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~--~~~~~~~~~~~~~~~~~~vvavD--i~~~~~~-~~ 94 (249)
+|++||+|||.||++++ +++||++|||||||||+|||+++++ ++. ..+.++|+| +.|+.++ +|
T Consensus 53 ~yRSRAayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~-----------V~G~vig~D~~~~P~~~~~~G 120 (269)
T 2px2_A 53 HPVSRGTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQE-----------VRGYTKGGPGHEEPMLMQSYG 120 (269)
T ss_dssp CCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEE-----------EEEECCCSTTSCCCCCCCSTT
T ss_pred CcccHHHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCC-----------ceeEEEccccccCCCcccCCC
Confidence 59999999999999998 9999999999999999999999987 431 136888999 6666655 78
Q ss_pred ceEe---ec-CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCC-EEEEEEec
Q 025715 95 VIQV---QG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG-KFIAKIFR 169 (249)
Q Consensus 95 v~~~---~g-Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG-~lv~k~~~ 169 (249)
+.++ +| |+++. .+..+|+|+|||+|+ +|.+..|+.+++. ++..|.++|+||| .|++|+|+
T Consensus 121 v~~i~~~~G~Df~~~----------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 121 WNIVTMKSGVDVFYK----------PSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp GGGEEEECSCCGGGS----------CCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEESC
T ss_pred ceEEEeeccCCccCC----------CCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEECC
Confidence 7444 47 99863 346899999999998 8887777766544 8899999999999 99999999
Q ss_pred C--CCHHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCchhhhHhHHhhC-CCCCCCCC
Q 025715 170 G--KDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVG-SPWGGEDQ 236 (249)
Q Consensus 170 ~--~~~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 236 (249)
+ +.+.+++..+++.|..|.+ +|.+||..|+|+|+||..-....+--......++.-+. ..|.+...
T Consensus 186 g~~~~~~~~l~~lk~~F~~vkv-k~paSR~~S~E~YlVa~~~~n~~~~v~~~s~~l~~r~~~~~~~~~~~ 254 (269)
T 2px2_A 186 PYMPKVIEKLESLQRRFGGGLV-RVPLSRNSNHEMYWVSGASGNIVHAVNMTSQVLIGRMDKKIWKGPKY 254 (269)
T ss_dssp TTSHHHHHHHHHHHHHHCCEEE-CCTTSCTTCCCEEEETTCCSCHHHHHHHHHHHHHHTSSCSSCCCCEE
T ss_pred CCchHHHHHHHHHHHHcCCEEE-ECCCCCCCCccEEEEecccCcHHHHHHHHHHHHHHHhcccccCCCCc
Confidence 6 4455667788889999996 55599999999999997654433222333334455554 34544433
No 3
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=100.00 E-value=3e-34 Score=246.54 Aligned_cols=182 Identities=21% Similarity=0.184 Sum_probs=146.4
Q ss_pred hccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCC---CCCCC--
Q 025715 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP---MAPIE-- 93 (249)
Q Consensus 19 ~~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~---~~~~~-- 93 (249)
..|++||+|||.||+++| +++++.+|||||||||+|+++++++.+ ...|+|+|+.. +.+++
T Consensus 69 g~YrSRAAfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~g-------------v~sV~GvdvG~d~~~~pi~~~ 134 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKN-------------VKKVMAFTLGVQGHEKPIMRT 134 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTSCCCCCCC
T ss_pred CCEecHHHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcC-------------CCeeeeEEeccCccccccccc
Confidence 358999999999999999 789999999999999999999997654 35788999964 22222
Q ss_pred --C--ceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC--CEEEEEE
Q 025715 94 --G--VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG--GKFIAKI 167 (249)
Q Consensus 94 --~--v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g--G~lv~k~ 167 (249)
+ +.....++.. ..+...++|+|+|||+|+ +|.+..|++.++.| |..|.++|+|| |.||+|+
T Consensus 135 ~~g~~ii~~~~~~dv--------~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 135 TLGWNLIRFKDKTDV--------FNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp BTTGGGEEEECSCCG--------GGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEEE
T ss_pred cCCCceEEeeCCcch--------hhcCCCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEEE
Confidence 2 2222222111 124568999999999999 99887787776655 88999999999 9999999
Q ss_pred ec--CCCHHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCchhhhHhHHhhC
Q 025715 168 FR--GKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVG 228 (249)
Q Consensus 168 ~~--~~~~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~~~~~~~~~~~~ 228 (249)
|+ +++..++++.+++.|+.|.+.|| +||..|+|+|+||.+..+....-+.....++..+.
T Consensus 202 F~pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~~ 263 (282)
T 3gcz_A 202 LCPYTPLIMEELSRLQLKHGGGLVRVP-LSRNSTHEMYWVSGTRTDVVGTVSNVSRLLTRRML 263 (282)
T ss_dssp SCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCSHHHHHHHHHHHHHHHH
T ss_pred ecCCCccHHHHHHHHHHhcCCEEEEcC-CCcccCcceeEEEecCCCccchHHHHHHHHHHHHh
Confidence 99 78888999999999999999999 99999999999999877776666665555555553
No 4
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=100.00 E-value=9.4e-33 Score=227.57 Aligned_cols=182 Identities=30% Similarity=0.500 Sum_probs=150.5
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCC-CCeEEEecCCCCCCCCCceEe
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGD-LPLIVAIDLQPMAPIEGVIQV 98 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~-~~~vvavDi~~~~~~~~v~~~ 98 (249)
||++||++||.+++++|++++++.+|||||||||+++.+++++.+ + .++|+|+|++++...++++++
T Consensus 1 ~~~~r~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~------------~~~~~v~gvD~s~~~~~~~v~~~ 68 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTK------------NYKNKIIGIDKKIMDPIPNVYFI 68 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTT------------TSCEEEEEEESSCCCCCTTCEEE
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcC------------CCCceEEEEeCCccCCCCCceEE
Confidence 699999999999999999999999999999999999999998874 2 479999999998777889999
Q ss_pred ecCCCChh-----------------hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCC
Q 025715 99 QGDITNAR-----------------TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG 161 (249)
Q Consensus 99 ~gDi~~~~-----------------~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG 161 (249)
++|+.+.. ....+.+.+.+.+||+|++|+.+.+.|.+..++....++...++..+.++|||||
T Consensus 69 ~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG 148 (201)
T 2plw_A 69 QGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGG 148 (201)
T ss_dssp ECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred EccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCC
Confidence 99998764 2333333356678999999998777665445555555666778999999999999
Q ss_pred EEEEEEecCCCHHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCC
Q 025715 162 KFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPE 213 (249)
Q Consensus 162 ~lv~k~~~~~~~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~ 213 (249)
.|+++++...+..++...++..|..+.+++|.++|+.++|.|+||++|++++
T Consensus 149 ~lv~~~~~~~~~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~~~~~~ 200 (201)
T 2plw_A 149 TYIVKMYLGSQTNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKNFLGRK 200 (201)
T ss_dssp EEEEEEECSTTHHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEEECCC-
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHheEEEECCcccCCcCceEEEEEecCccCC
Confidence 9999999888888888888889999999999999999999999999999875
No 5
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=100.00 E-value=8.1e-34 Score=245.21 Aligned_cols=187 Identities=18% Similarity=0.184 Sum_probs=152.0
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---CCC---
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PIE--- 93 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---~~~--- 93 (249)
+|++||+|||.||+++ +++++|.+|||||||||+|+++++++.+ ...|+|+|+.... +..
T Consensus 61 ~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~g-------------v~sV~Gvdlg~~~~~~P~~~~~ 126 (300)
T 3eld_A 61 ISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKE-------------VMSVKGYTLGIEGHEKPIHMQT 126 (300)
T ss_dssp CCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTSCCCCCCCB
T ss_pred CccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcC-------------CceeeeEEeccccccccccccc
Confidence 6999999999999999 9999999999999999999999998654 3578899997431 111
Q ss_pred ---CceEeec--CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEEEE
Q 025715 94 ---GVIQVQG--DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAKI 167 (249)
Q Consensus 94 ---~v~~~~g--Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~k~ 167 (249)
++..... |+.. +.+..+|+|+||++|+ +|.+..|+..++.| +..|.++|+|| |.||+|+
T Consensus 127 ~~~~iv~~~~~~di~~----------l~~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 127 LGWNIVKFKDKSNVFT----------MPTEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVKV 191 (300)
T ss_dssp TTGGGEEEECSCCTTT----------SCCCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEEE
T ss_pred cCCceEEeecCceeee----------cCCCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEEe
Confidence 1111221 3322 4567899999999999 99888888777666 88999999999 9999999
Q ss_pred ec--CCCHHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCchhhhHhHHhhCCCCCCCCC
Q 025715 168 FR--GKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVGSPWGGEDQ 236 (249)
Q Consensus 168 ~~--~~~~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (249)
|+ +++..++++.++++|..|.+.|| +||++|+|+|+||.+..+....-+.+...++..+..+|.+-..
T Consensus 192 F~~yG~~~~~ll~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~~~~l~~r~~~~~~~~~~ 261 (300)
T 3eld_A 192 LAPYHPDVIEKLERLQLRFGGGIVRVP-FSRNSTHEMYYISGARNNITHMVNTTSRSLLRRMTRPSGKAII 261 (300)
T ss_dssp SSTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHHHSCCCCCEE
T ss_pred ccccCccHHHHHHHHHHhCCcEEEEeC-CCCCCChHHeeeccCCCCcchhHHHHHHHHHHHHhccCCCCee
Confidence 99 88889999999999999999999 9999999999999997777666676666666666446654444
No 6
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=100.00 E-value=1.7e-33 Score=241.59 Aligned_cols=184 Identities=18% Similarity=0.182 Sum_probs=146.8
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCC---CCCCCC---
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQ---PMAPIE--- 93 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~---~~~~~~--- 93 (249)
.|++||+|||.||+++ .+++++.+|||||||||+|+++++++.+ ...|+|+|+. ++.+++
T Consensus 54 ~YrSRaA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~-------------~~~v~g~dVGvDl~~~pi~~~~ 119 (277)
T 3evf_A 54 VAVSRGTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKE-------------VSGVKGFTLGRDGHEKPMNVQS 119 (277)
T ss_dssp BCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTCCCCCCCCB
T ss_pred CccccHHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcC-------------CCcceeEEEeccCcccccccCc
Confidence 3999999999999999 7789999999999999999999987643 2455555554 333332
Q ss_pred ---CceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEEEEec
Q 025715 94 ---GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAKIFR 169 (249)
Q Consensus 94 ---~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~k~~~ 169 (249)
++..+++|+... .+.+..||+|+||++|+ +|.+..|+..++.| +..|.++|+|| |.||+|+|+
T Consensus 120 ~g~~ii~~~~~~dv~--------~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 120 LGWNIITFKDKTDIH--------RLEPVKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TTGGGEEEECSCCTT--------TSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCeEEEeccceeh--------hcCCCCccEEEecCccC-cCchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEecC
Confidence 344455554221 24567899999999999 88877777766555 88999999999 999999999
Q ss_pred --CCCHHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCchhhhHhHHhhC-CCC
Q 025715 170 --GKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVG-SPW 231 (249)
Q Consensus 170 --~~~~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~~~~~~~~~~~~-~~~ 231 (249)
+++..++++.+++.|+.|.+.|| +||..|+|+|+||.+..+....-+.....++..+. ..|
T Consensus 187 pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~~~~~~ 250 (277)
T 3evf_A 187 PYMPDVLEKLELLQRRFGGTVIRNP-LSRNSTHEMYYVSGARSNVTFTVNQTSRLLMRRMRRPTG 250 (277)
T ss_dssp TTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCCccHHHHHHHHHHhcCCEEEEeC-CCCCCCCceEEEEecCCCccchHHHHHHHHHHHHhcCCC
Confidence 77888999999999999999999 99999999999999877776666665566666663 445
No 7
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.98 E-value=1e-31 Score=220.34 Aligned_cols=194 Identities=32% Similarity=0.548 Sum_probs=151.3
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEe-
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQV- 98 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~- 98 (249)
+|++|+++||.|+++++.+++++.+|||+|||||.++..++++++... .....+.++|+|+|++++..+++++++
T Consensus 1 ~~~~r~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~----~~~~~~~~~v~~vD~s~~~~~~~~~~~~ 76 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAG----TDPSSPVGFVLGVDLLHIFPLEGATFLC 76 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTC----CCTTSCCCEEEEECSSCCCCCTTCEEEC
T ss_pred CchhHHHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhcccc----ccccCCCceEEEEechhcccCCCCeEEE
Confidence 689999999999999999999999999999999999999999875100 000112379999999998777889999
Q ss_pred ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHH
Q 025715 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYC 178 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~ 178 (249)
++|+.+......+...+.+++||+|+||+.+++.+.+..++.....++..++..+.++|||||+|+++++......++..
T Consensus 77 ~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 156 (196)
T 2nyu_A 77 PADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQR 156 (196)
T ss_dssp SCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHH
T ss_pred eccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHH
Confidence 99999876655555556556899999999888777665555555666678899999999999999999998777788888
Q ss_pred HHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCc
Q 025715 179 QLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNP 217 (249)
Q Consensus 179 ~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~ 217 (249)
.++.+|..+..++|.++|..++|.|++|.||+.+..|.|
T Consensus 157 ~l~~~f~~v~~~~~~~~~~~~~e~~~v~~g~~~~~~~~~ 195 (196)
T 2nyu_A 157 RLTEEFQNVRIIKPEASRKESSEVYFLATQYHGRKGTVK 195 (196)
T ss_dssp HHHHHEEEEEEECCC--------EEEEEEEECCC-----
T ss_pred HHHHHhcceEEECCcccCccCceEEEEeeecCCcccccC
Confidence 888889999999999999999999999999999988866
No 8
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.95 E-value=4.8e-27 Score=195.93 Aligned_cols=156 Identities=21% Similarity=0.157 Sum_probs=129.6
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--------
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------- 91 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-------- 91 (249)
+|+|||+|||.||+++| .++++++||||||+||+|+++++...+ ..+|+|+|+.....
T Consensus 58 ~yrSRa~~KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g-------------~~~V~avdvG~~ghe~P~~~~s 123 (267)
T 3p8z_A 58 HAVSRGSAKLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKK-------------VTEVRGYTKGGPGHEEPVPMST 123 (267)
T ss_dssp CCSSTHHHHHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTT-------------EEEEEEECCCSTTSCCCCCCCC
T ss_pred CccchHHHHHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcC-------------CCEEEEEecCCCCccCcchhhh
Confidence 59999999999999999 789999999999999999999987664 35899999987531
Q ss_pred --CCCceEeec-CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 92 --IEGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 92 --~~~v~~~~g-Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
...|+|.++ |+.. +....+|.|+||+++ .++.+..++.+.+ .+|+.+.++|++ |.|+||++
T Consensus 124 ~gwn~v~fk~gvDv~~----------~~~~~~DtllcDIge-Ss~~~~vE~~Rtl----rvLela~~wL~~-~~fc~KVl 187 (267)
T 3p8z_A 124 YGWNIVKLMSGKDVFY----------LPPEKCDTLLCDIGE-SSPSPTVEESRTI----RVLKMVEPWLKN-NQFCIKVL 187 (267)
T ss_dssp TTTTSEEEECSCCGGG----------CCCCCCSEEEECCCC-CCSCHHHHHHHHH----HHHHHHGGGCSS-CEEEEEES
T ss_pred cCcCceEEEeccceee----------cCCccccEEEEecCC-CCCChhhhhhHHH----HHHHHHHHhccc-CCEEEEEc
Confidence 256899999 9854 244789999999988 4444333443333 388999999999 89999999
Q ss_pred cCCC--HHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEE
Q 025715 169 RGKD--TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 206 (249)
Q Consensus 169 ~~~~--~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~ 206 (249)
.+.. ..+.+..++..|..+.+.+|. ||.++.|+|+|.
T Consensus 188 ~py~p~v~e~l~~lq~~fgg~lVR~P~-SRnsThEMY~Vs 226 (267)
T 3p8z_A 188 NPYMPTVIEHLERLQRKHGGMLVRNPL-SRNSTHEMYWIS 226 (267)
T ss_dssp CCCSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEES
T ss_pred cCCChhHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEe
Confidence 9887 667777888889999999999 999999999993
No 9
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.94 E-value=2.8e-27 Score=204.75 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=142.1
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC------CCCC
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIE 93 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~------~~~~ 93 (249)
.|++|+++||.+++++ ..+++|.+|||||||||+|+++++++ ++|+|||++++ ....
T Consensus 54 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----------------~~V~gvD~s~m~~~a~~~~~~ 116 (265)
T 2oxt_A 54 LSVSRGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR----------------PHVMDVRAYTLGVGGHEVPRI 116 (265)
T ss_dssp BCSSTHHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS----------------TTEEEEEEECCCCSSCCCCCC
T ss_pred CccchHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc----------------CcEEEEECchhhhhhhhhhhh
Confidence 4899999999999999 77789999999999999999999865 38999999997 2333
Q ss_pred ------CceEe--ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCC--EE
Q 025715 94 ------GVIQV--QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG--KF 163 (249)
Q Consensus 94 ------~v~~~--~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG--~l 163 (249)
++.++ ++|+++. ++++||+|+||++ ...+.+..++... ..++..+.++||||| .|
T Consensus 117 ~~~~~~~v~~~~~~~D~~~l----------~~~~fD~V~sd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~f 181 (265)
T 2oxt_A 117 TESYGWNIVKFKSRVDIHTL----------PVERTDVIMCDVG-ESSPKWSVESERT----IKILELLEKWKVKNPSADF 181 (265)
T ss_dssp CCBTTGGGEEEECSCCTTTS----------CCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHCTTCEE
T ss_pred hhccCCCeEEEecccCHhHC----------CCCCCcEEEEeCc-ccCCccchhHHHH----HHHHHHHHHHhccCCCeEE
Confidence 67888 9999873 3578999999987 5555433333221 127788899999999 99
Q ss_pred EEEEecCCCHH---HHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCchhhhHhHHhhCC
Q 025715 164 IAKIFRGKDTS---LLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVGS 229 (249)
Q Consensus 164 v~k~~~~~~~~---~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~~~~~~~~~~~~~ 229 (249)
+++++. +... +++..+...|..+.+.| .+||..|.|+|+||.++.....+-..++..+++.+..
T Consensus 182 v~kv~~-~~~~~~~~~l~~l~~~f~~v~~~k-~~sR~~s~E~y~v~~~~~~~~~~~~~~~~~l~~r~~~ 248 (265)
T 2oxt_A 182 VVKVLC-PYSVEVMERLSVMQRKWGGGLVRN-PYSRNSTHEMYFTSRAGGNIIGAVTACTERLLGRMAR 248 (265)
T ss_dssp EEEESC-TTSHHHHHHHHHHHHHHCCEEECC-TTSCTTCCCEEEESSCCSCHHHHHHHHHHHHHHTTSC
T ss_pred EEEeCC-CCChhHHHHHHHHHHHcCCEEEEE-ecccCCCccEEEEecCCCCcchhhHHHHHHHHHHHhc
Confidence 999998 4444 66666777899999999 7899999999999998888877777766677777765
No 10
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.94 E-value=1.2e-25 Score=179.45 Aligned_cols=180 Identities=33% Similarity=0.509 Sum_probs=151.2
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEee
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQ 99 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~ 99 (249)
+|++|+++++.++.+.+..++++.+|||+|||+|.++..+++.++ +..+++++|++++...+++++++
T Consensus 1 ~y~~r~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~~~~~~~ 68 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIG------------GKGRIIACDLLPMDPIVGVDFLQ 68 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHC------------TTCEEEEEESSCCCCCTTEEEEE
T ss_pred CcchhHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhC------------CCCeEEEEECccccccCcEEEEE
Confidence 589999999999999999888999999999999999999998874 34799999999965668899999
Q ss_pred cCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHH
Q 025715 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQ 179 (249)
Q Consensus 100 gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~ 179 (249)
+|+.+.+..+.+...+.+++||+|++|+.+.+.+....++.....+....+..+.++|+|||.+++.++.......+...
T Consensus 69 ~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 148 (180)
T 1ej0_A 69 GDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 148 (180)
T ss_dssp SCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHH
T ss_pred cccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHH
Confidence 99998765444444456678999999987766554433333334455678899999999999999988888888888888
Q ss_pred HhcCCCeeEEecCCCCCCCCceEEEEEeeccC
Q 025715 180 LKLFFPVVTFAKPKSSRNSSIEAFAVCENYFP 211 (249)
Q Consensus 180 l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~ 211 (249)
++.+|..+.+.+|..+|..+.|.|++|+||+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (180)
T 1ej0_A 149 IRSLFTKVKVRKPDSSRARSREVYIVATGRKP 180 (180)
T ss_dssp HHHHEEEEEEECCTTSCTTCCEEEEEEEEECC
T ss_pred HHHhhhhEEeecCCcccccCceEEEEEccCCC
Confidence 88889999999999999999999999999873
No 11
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.94 E-value=6.1e-27 Score=206.47 Aligned_cols=179 Identities=19% Similarity=0.121 Sum_probs=138.5
Q ss_pred hccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecC----CC--CC--
Q 025715 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL----QP--MA-- 90 (249)
Q Consensus 19 ~~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi----~~--~~-- 90 (249)
.+|++|+++||.+++++ .++++|.+|||||||||+|+++++++ ++|+|||+ ++ +.
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~----------------~~V~gvD~~~~~~~~~~~~~ 123 (305)
T 2p41_A 61 HHAVSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL----------------KNVREVKGLTKGGPGHEEPI 123 (305)
T ss_dssp SCCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS----------------TTEEEEEEECCCSTTSCCCC
T ss_pred CCccccHHHHHHHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc----------------CCEEEEeccccCchhHHHHH
Confidence 35899999999999999 77899999999999999999999865 37999998 33 21
Q ss_pred ---CC--CCceEeec-CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEE
Q 025715 91 ---PI--EGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (249)
Q Consensus 91 ---~~--~~v~~~~g-Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv 164 (249)
.. +++.++++ |+.+. +..+||+|+||++++ .|.+..++... ..++..+.++|||||.|+
T Consensus 124 ~~~~~~~~~v~~~~~~D~~~l----------~~~~fD~V~sd~~~~-~g~~~~d~~~~----l~~L~~~~~~LkpGG~~v 188 (305)
T 2p41_A 124 PMSTYGWNLVRLQSGVDVFFI----------PPERCDTLLCDIGES-SPNPTVEAGRT----LRVLNLVENWLSNNTQFC 188 (305)
T ss_dssp CCCSTTGGGEEEECSCCTTTS----------CCCCCSEEEECCCCC-CSSHHHHHHHH----HHHHHHHHHHCCTTCEEE
T ss_pred HhhhcCCCCeEEEeccccccC----------CcCCCCEEEECCccc-cCcchhhHHHH----HHHHHHHHHHhCCCCEEE
Confidence 12 46888888 88764 246899999999876 55543333221 147788899999999999
Q ss_pred EEEecCCC--HHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCchhhhHhHHhhCCC
Q 025715 165 AKIFRGKD--TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVGSP 230 (249)
Q Consensus 165 ~k~~~~~~--~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (249)
++++.+.. ...++..++..|..+.+.|| +||..+.|.|++|.||+.....-.+.++.++..+..+
T Consensus 189 ~kv~~~~~~~~~~~l~~l~~~f~~v~~~kP-~sR~~s~E~y~v~~~~~~~~~~~~t~~~~~~~~~~~~ 255 (305)
T 2p41_A 189 VKVLNPYMSSVIEKMEALQRKHGGALVRNP-LSRNSTHEMYWVSNASGNIVSSVNMISRMLINRFTMR 255 (305)
T ss_dssp EEESCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCHHHHHHHHHHHHHHHHTCC
T ss_pred EEeCCCCCchHHHHHHHHHHHcCCEEEecC-CCCCccHHHHHHHhccCCcccchhHHHHHHHHhhhcc
Confidence 99998754 44677777778999999999 9999999999999999876544444434444445444
No 12
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.93 E-value=3e-26 Score=199.39 Aligned_cols=178 Identities=23% Similarity=0.233 Sum_probs=135.4
Q ss_pred ccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC------CCCC
Q 025715 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIE 93 (249)
Q Consensus 20 ~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~------~~~~ 93 (249)
.|++|+++||.++.++ ..+++|.+|||||||||+|+++++++ ++|+|||++++ ....
T Consensus 62 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----------------~~V~gVD~s~m~~~a~~~~~~ 124 (276)
T 2wa2_A 62 HAVSRGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ----------------PNVREVKAYTLGTSGHEKPRL 124 (276)
T ss_dssp ---CHHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS----------------TTEEEEEEECCCCTTSCCCCC
T ss_pred CcCchHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc----------------CCEEEEECchhhhhhhhchhh
Confidence 5899999999999988 77789999999999999999999865 38999999997 2233
Q ss_pred ------CceEe--ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCC--EE
Q 025715 94 ------GVIQV--QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG--KF 163 (249)
Q Consensus 94 ------~v~~~--~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG--~l 163 (249)
++.++ ++|+.+. ++++||+|+||++ ...+.+..++... ..++..+.++||||| .|
T Consensus 125 ~~~~~~~v~~~~~~~D~~~l----------~~~~fD~Vvsd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~~ 189 (276)
T 2wa2_A 125 VETFGWNLITFKSKVDVTKM----------EPFQADTVLCDIG-ESNPTAAVEASRT----LTVLNVISRWLEYNQGCGF 189 (276)
T ss_dssp CCCTTGGGEEEECSCCGGGC----------CCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHSTTCEE
T ss_pred hhhcCCCeEEEeccCcHhhC----------CCCCcCEEEECCC-cCCCchhhhHHHH----HHHHHHHHHHhccCCCcEE
Confidence 67888 8998763 4578999999987 5554432332221 126788899999999 99
Q ss_pred EEEEecCCCHH--HHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCchhhhHhHHhhCCC
Q 025715 164 IAKIFRGKDTS--LLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLEKVGSP 230 (249)
Q Consensus 164 v~k~~~~~~~~--~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (249)
+++++.+.... +++..++..|..+.+. |.+||..+.|+|++|.++......-....+.++..+.+.
T Consensus 190 v~~~~~~~~~~~~~~l~~l~~~f~~v~v~-P~~sR~~s~E~y~v~~~~~~~~~~~~~~~~~l~~r~~~~ 257 (276)
T 2wa2_A 190 CVKVLNPYSCDVLEALMKMQARFGGGLIR-VPLSRNSTHEMYFVSGIKNNIMGNVTAVSRQLLKRMEEQ 257 (276)
T ss_dssp EEEESCCCSHHHHHHHHHHHHHHCCEEEC-CTTSCTTCCCEEEESSCCCCHHHHHHHHHHHHHHHHCC-
T ss_pred EEEeCCCCchhHHHHHHHHHHHcCCEEEE-cCCCCCcchheEEecccCCCcchhHHHHHHHHHHHhhcc
Confidence 99999844321 5556677789999988 999999999999999887766555555555666666553
No 13
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.93 E-value=6.9e-26 Score=194.29 Aligned_cols=157 Identities=24% Similarity=0.208 Sum_probs=126.7
Q ss_pred cCCCeEEEEcC------CCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCA------APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~------gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
..|++|||||| +||+| ++.++.+ .++.|+++|++++....++ +++||+....
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p------------~g~~VVavDL~~~~sda~~-~IqGD~~~~~------- 165 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLP------------TGTLLVDSDLNDFVSDADS-TLIGDCATVH------- 165 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSC------------TTCEEEEEESSCCBCSSSE-EEESCGGGEE-------
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCC------------CCcEEEEeeCcccccCCCe-EEEccccccc-------
Confidence 34899999996 99994 5555543 2369999999998866665 5999976532
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcCCCeeEEecCC
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPK 193 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~f~~v~~~kP~ 193 (249)
.+++||+|+|||+|+.+|..+.+..++..|++.++..|.+.|+|||.|++|+|+++....+ ..+++.|+.|..+| .
T Consensus 166 --~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L-~~lrk~F~~VK~fK-~ 241 (344)
T 3r24_A 166 --TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADL-YKLMGHFSWWTAFV-T 241 (344)
T ss_dssp --ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHH-HHHHTTEEEEEEEE-E
T ss_pred --cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHH-HHHHhhCCeEEEEC-C
Confidence 2478999999999999998666655566788999999999999999999999998885444 44567999999997 6
Q ss_pred CCCCCCceEEEEEeeccCC--CCCCchhhhH
Q 025715 194 SSRNSSIEAFAVCENYFPP--EGFNPKDLHR 222 (249)
Q Consensus 194 ~sr~~s~E~y~v~~g~~~~--~~~~~~~~~~ 222 (249)
+||..|+|+|+||+||++. ..+|.+.|++
T Consensus 242 ASRa~SsEvYLVG~gfKg~~~~~idg~~~ha 272 (344)
T 3r24_A 242 NVNASSSEAFLIGANYLGKPKEQIDGYTMHA 272 (344)
T ss_dssp GGGTTSSCEEEEEEEECSSCSSCCCHHHHHH
T ss_pred CCCCCCeeEEEEeeeccCCCceeeccceeee
Confidence 9999999999999999996 4456554443
No 14
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.92 E-value=7.3e-25 Score=188.33 Aligned_cols=156 Identities=21% Similarity=0.227 Sum_probs=127.0
Q ss_pred cchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---C------
Q 025715 21 WRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---P------ 91 (249)
Q Consensus 21 ~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---~------ 91 (249)
|++|++|||.||++++ .++++.+||||||+||+|+++++...+ ..+|+|+|+.... +
T Consensus 75 y~SR~~~KL~ei~~~~-~l~~~~~VlDLGaapGGwsq~~~~~~g-------------v~~V~avdvG~~~he~P~~~~ql 140 (321)
T 3lkz_A 75 PVSRGTAKLRWLVERR-FLEPVGKVIDLGCGRGGWCYYMATQKR-------------VQEVRGYTKGGPGHEEPQLVQSY 140 (321)
T ss_dssp CSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHTTCTT-------------EEEEEEECCCSTTSCCCCCCCBT
T ss_pred ccchHHHHHHHHHHhc-CCCCCCEEEEeCCCCCcHHHHHHhhcC-------------CCEEEEEEcCCCCccCcchhhhc
Confidence 9999999999999995 568889999999999999999887654 3589999998752 1
Q ss_pred -CCCceEeec-CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEEEEe
Q 025715 92 -IEGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAKIF 168 (249)
Q Consensus 92 -~~~v~~~~g-Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~k~~ 168 (249)
...|.+.++ |+... ....+|+|+||++ ..++.+..++.+.+ .+|+.+.++|++| |.|+||+|
T Consensus 141 ~w~lV~~~~~~Dv~~l----------~~~~~D~ivcDig-eSs~~~~ve~~Rtl----~vLel~~~wL~~~~~~f~~KVl 205 (321)
T 3lkz_A 141 GWNIVTMKSGVDVFYR----------PSECCDTLLCDIG-ESSSSAEVEEHRTI----RVLEMVEDWLHRGPREFCVKVL 205 (321)
T ss_dssp TGGGEEEECSCCTTSS----------CCCCCSEEEECCC-CCCSCHHHHHHHHH----HHHHHHHHHHTTCCCEEEEEES
T ss_pred CCcceEEEeccCHhhC----------CCCCCCEEEEECc-cCCCChhhhhhHHH----HHHHHHHHHhccCCCcEEEEEc
Confidence 134778887 88664 3467999999997 54554333443332 3888999999999 99999999
Q ss_pred cC--CCHHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEE
Q 025715 169 RG--KDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 206 (249)
Q Consensus 169 ~~--~~~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~ 206 (249)
.+ ++..+.+..++..|..+.+.+|. ||.++.|+|+|.
T Consensus 206 ~pY~~~v~e~l~~lq~~fgg~lvr~P~-SRnst~EmY~vs 244 (321)
T 3lkz_A 206 CPYMPKVIEKMELLQRRYGGGLVRNPL-SRNSTHEMYWVS 244 (321)
T ss_dssp CTTSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEET
T ss_pred CCCChHHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEe
Confidence 98 56667788888899999999999 999999999994
No 15
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.85 E-value=9.5e-22 Score=171.84 Aligned_cols=159 Identities=23% Similarity=0.229 Sum_probs=124.4
Q ss_pred cccCCCeEEEEcC------CCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceE-eecCCCChhhHHH
Q 025715 38 IFEGVKRVVDLCA------APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQ-VQGDITNARTAEV 110 (249)
Q Consensus 38 ~~~~g~~vLDLG~------gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~-~~gDi~~~~~~~~ 110 (249)
.+++|.+|||||| |||+ ..++++++ +.++|+|+|+++. ++++++ +++|+++..
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~------------~~~~V~gvDis~~--v~~v~~~i~gD~~~~~---- 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP------------TGTLLVDSDLNDF--VSDADSTLIGDCATVH---- 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSC------------TTCEEEEEESSCC--BCSSSEEEESCGGGCC----
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC------------CCCEEEEEECCCC--CCCCEEEEECccccCC----
Confidence 3578999999999 7788 66676665 3589999999998 678999 999998743
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-CCeeEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPVVTF 189 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f~~v~~ 189 (249)
+ .++||+|+||+.++..|.+..++.....++..++..+.++|||||+|+++++...+..++...++.+ |..|..
T Consensus 120 ----~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 120 ----T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFV 194 (290)
T ss_dssp ----C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEE
T ss_pred ----c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEE
Confidence 1 2689999999877666655444322234456789999999999999999999888878888888887 888877
Q ss_pred ecCCCCCCCCceEEEEEeeccCC--CCCCchhhhHhH
Q 025715 190 AKPKSSRNSSIEAFAVCENYFPP--EGFNPKDLHRLL 224 (249)
Q Consensus 190 ~kP~~sr~~s~E~y~v~~g~~~~--~~~~~~~~~~~~ 224 (249)
. ++|..++|.|++|+||++. ..+++..++..+
T Consensus 195 ~---asr~~s~e~~lv~~~~~~~~~~~i~~~~~h~~~ 228 (290)
T 2xyq_A 195 T---NVNASSSEAFLIGANYLGKPKEQIDGYTMHANY 228 (290)
T ss_dssp E---GGGTTSSCEEEEEEEECSSCSSCCCHHHHHHHH
T ss_pred E---EcCCCchheEEecCCccCCCcccCCccccccce
Confidence 6 7888899999999999987 345666556553
No 16
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.71 E-value=5.2e-17 Score=138.29 Aligned_cols=123 Identities=17% Similarity=0.118 Sum_probs=102.3
Q ss_pred CCCCceEe-ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCC-C--cCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 91 PIEGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH-D--MDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 91 ~~~~v~~~-~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~-~--~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+++|+.++ ++|+++++. .+++|+|+|||+++.+|.+ . .|+...+.| ++..|..+|+|||+|++|
T Consensus 186 Pi~GAt~~~~lDfg~p~~---------~~k~DvV~SDMApn~sGh~yqQC~DHarii~L---al~fA~~vLkPGGtfV~K 253 (320)
T 2hwk_A 186 DRPEATFRARLDLGIPGD---------VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNPGGTCVSI 253 (320)
T ss_dssp SSTTCSEECCGGGCSCTT---------SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEEEEEEEEE
T ss_pred cCCCceeecccccCCccc---------cCcCCEEEEcCCCCCCCccccccchHHHHHHH---HHHHHHHhcCCCceEEEE
Confidence 46788888 899998763 2579999999999999987 5 566555555 889999999999999999
Q ss_pred EecCC--CHHHHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCC-CCCchhhhHhHHh
Q 025715 167 IFRGK--DTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPE-GFNPKDLHRLLEK 226 (249)
Q Consensus 167 ~~~~~--~~~~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~-~~~~~~~~~~~~~ 226 (249)
+|... ...++...+.+.|+.|+.+||.+||. |+|.|+|++||++.. -.++--|+..+++
T Consensus 254 vyggaDr~se~lv~~LaR~F~~Vr~vKP~ASR~-StEvf~La~gf~g~~r~~~~~~l~~~l~~ 315 (320)
T 2hwk_A 254 GYGYADRASESIIGAIARQFKFSRVCKPKSSLE-ETEVLFVFIGYDRKARTHNPYKLSSTLTN 315 (320)
T ss_dssp ECCCCSHHHHHHHHHHHTTEEEEEEECCTTCCS-TTCEEEEEEEECCCCCCCCHHHHHHHHHH
T ss_pred EecCCcccHHHHHHHHHHhcceeeeeCCCCccc-cceEEEEEEeecCCccccCHHHhcchhhh
Confidence 99988 57789999999999999999999999 999999999999954 3455555555554
No 17
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.68 E-value=2.8e-16 Score=140.51 Aligned_cols=89 Identities=26% Similarity=0.312 Sum_probs=74.9
Q ss_pred hccchhhhhhHHhhhhhcC-------cccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC
Q 025715 19 EGWRARSAFKLLQIDEEFN-------IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP 91 (249)
Q Consensus 19 ~~~~~ra~~KL~ei~~~~~-------~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~ 91 (249)
....|||++||.|+...|. .+++|++||||||+|||||+.++++ + ++|+|||+.++.+
T Consensus 182 ~~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r-g--------------~~V~aVD~~~l~~ 246 (375)
T 4auk_A 182 ADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR-N--------------MWVYSVDNGPMAQ 246 (375)
T ss_dssp TTSSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT-T--------------CEEEEECSSCCCH
T ss_pred CCCCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC-C--------------CEEEEEEhhhcCh
Confidence 4578999999999888773 4689999999999999999999876 2 7999999999874
Q ss_pred ----CCCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCC
Q 025715 92 ----IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPD 130 (249)
Q Consensus 92 ----~~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~ 130 (249)
.++|+++++|..... .....||+|+|||+++
T Consensus 247 ~l~~~~~V~~~~~d~~~~~--------~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 247 SLMDTGQVTWLREDGFKFR--------PTRSNISWMVCDMVEK 281 (375)
T ss_dssp HHHTTTCEEEECSCTTTCC--------CCSSCEEEEEECCSSC
T ss_pred hhccCCCeEEEeCcccccc--------CCCCCcCEEEEcCCCC
Confidence 478999999987753 2346899999999764
No 18
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.56 E-value=2.3e-14 Score=121.30 Aligned_cols=139 Identities=15% Similarity=0.087 Sum_probs=94.2
Q ss_pred cchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C
Q 025715 21 WRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P 91 (249)
Q Consensus 21 ~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~ 91 (249)
|+++.+-+|.+..+.+. +++|.+|||+|||||+++.++++.++ +.++|+|+|+++.. .
T Consensus 57 ~~skla~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~------------~~G~V~avD~s~~~l~~l~~~a~~ 123 (232)
T 3id6_C 57 FRSKLAGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIE------------LNGKAYGVEFSPRVVRELLLVAQR 123 (232)
T ss_dssp TTCHHHHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHT------------TTSEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhC------------CCCEEEEEECcHHHHHHHHHHhhh
Confidence 45555666665544433 47899999999999999999999886 56899999999832 1
Q ss_pred CCCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec--
Q 025715 92 IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR-- 169 (249)
Q Consensus 92 ~~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~-- 169 (249)
..++.++.+|++.+.... .+ .++||+|++|++.. +.. ..+...+.++|||||.|++.+..
T Consensus 124 r~nv~~i~~Da~~~~~~~----~~-~~~~D~I~~d~a~~-------~~~------~il~~~~~~~LkpGG~lvisik~~~ 185 (232)
T 3id6_C 124 RPNIFPLLADARFPQSYK----SV-VENVDVLYVDIAQP-------DQT------DIAIYNAKFFLKVNGDMLLVIKARS 185 (232)
T ss_dssp CTTEEEEECCTTCGGGTT----TT-CCCEEEEEECCCCT-------THH------HHHHHHHHHHEEEEEEEEEEEC---
T ss_pred cCCeEEEEcccccchhhh----cc-ccceEEEEecCCCh-------hHH------HHHHHHHHHhCCCCeEEEEEEccCC
Confidence 368999999998754210 12 35899999998641 111 12334566699999999986431
Q ss_pred -------CCCHHHHHHHHhcC-CCeeEEe
Q 025715 170 -------GKDTSLLYCQLKLF-FPVVTFA 190 (249)
Q Consensus 170 -------~~~~~~l~~~l~~~-f~~v~~~ 190 (249)
.+...+....++.. |+-+...
T Consensus 186 ~d~t~~~~e~~~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 186 IDVTKDPKEIYKTEVEKLENSNFETIQII 214 (232)
T ss_dssp ----CCSSSSTTHHHHHHHHTTEEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHHCCCEEEEEe
Confidence 12234555556543 6655544
No 19
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.55 E-value=4.2e-14 Score=120.87 Aligned_cols=149 Identities=20% Similarity=0.324 Sum_probs=99.0
Q ss_pred cc-CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCCh
Q 025715 39 FE-GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (249)
Q Consensus 39 ~~-~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~ 105 (249)
++ ++.+|||+|||+|.++..++++.+ ..|+|+|+++.. .+. +++++++|+.+.
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~--------------~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~ 111 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTK--------------AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKI 111 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCC--------------CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGG
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcC--------------CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHh
Confidence 35 789999999999999999988743 499999999842 122 589999999875
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCCCCC---CCCCcCHHH------HHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHH
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAPDVT---GLHDMDEFV------QSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~~~~---g~~~~~~~~------~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l 176 (249)
.. .+..++||+|++|+++... +..+.+... ........+..+.++|||||.|++ ++......++
T Consensus 112 ~~------~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~ 184 (259)
T 3lpm_A 112 TD------LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-VHRPERLLDI 184 (259)
T ss_dssp GG------TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-EECTTTHHHH
T ss_pred hh------hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-EEcHHHHHHH
Confidence 31 2446799999999865332 222221111 112245688999999999999999 6777788888
Q ss_pred HHHHhcC-C--CeeEEecCCCCCCCCceEEEEEeeccC
Q 025715 177 YCQLKLF-F--PVVTFAKPKSSRNSSIEAFAVCENYFP 211 (249)
Q Consensus 177 ~~~l~~~-f--~~v~~~kP~~sr~~s~E~y~v~~g~~~ 211 (249)
...++.+ | .++..+.|...++. .+++.++.++
T Consensus 185 ~~~l~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~k~ 219 (259)
T 3lpm_A 185 IDIMRKYRLEPKRIQFVHPRSDREA---NTVLVEGIKD 219 (259)
T ss_dssp HHHHHHTTEEEEEEEEEESSTTSCC---SEEEEEEEET
T ss_pred HHHHHHCCCceEEEEEeecCCCCCc---EEEEEEEEeC
Confidence 8877754 3 33444555544443 3455555554
No 20
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=1.3e-13 Score=118.23 Aligned_cols=151 Identities=13% Similarity=0.133 Sum_probs=97.3
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C-----CC-CceEeecCCC
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-----IE-GVIQVQGDIT 103 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~-----~~-~v~~~~gDi~ 103 (249)
..++.+|||+|||+|.++..++++.+ ...|+++|+++.. . +. +++++++|+.
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~-------------~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~ 100 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLE-------------KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVT 100 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCT-------------TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHH
Confidence 35778999999999999999998863 4799999999731 1 12 4788999998
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCC-CCCCcCHHHHHH------HHHHHHHHHHHhccCCCEEEEEEecCCCHHHH
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVT-GLHDMDEFVQSQ------LILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~-g~~~~~~~~~~~------l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l 176 (249)
+... ......+..++||+|++|+++... +..+.+...... .....+..+.++|||||.|++ ++......++
T Consensus 101 ~~~~-~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~ 178 (260)
T 2ozv_A 101 LRAK-ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL-ISRPQSVAEI 178 (260)
T ss_dssp CCHH-HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE-EECGGGHHHH
T ss_pred HHhh-hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE-EEcHHHHHHH
Confidence 8521 111122456789999999754332 211111111111 135678899999999999998 5666677778
Q ss_pred HHHHhcCCCeeEE--ecCCCCCCCCceEEEEE
Q 025715 177 YCQLKLFFPVVTF--AKPKSSRNSSIEAFAVC 206 (249)
Q Consensus 177 ~~~l~~~f~~v~~--~kP~~sr~~s~E~y~v~ 206 (249)
...++..|..+.+ +.|...++.. ++++.
T Consensus 179 ~~~l~~~~~~~~i~~v~~~~~~~~~--~~lv~ 208 (260)
T 2ozv_A 179 IAACGSRFGGLEITLIHPRPGEDAV--RMLVT 208 (260)
T ss_dssp HHHHTTTEEEEEEEEEESSTTSCCC--EEEEE
T ss_pred HHHHHhcCCceEEEEEcCCCCCCce--EEEEE
Confidence 8877766655544 4455444433 44444
No 21
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.50 E-value=1.2e-13 Score=120.38 Aligned_cols=157 Identities=19% Similarity=0.212 Sum_probs=106.7
Q ss_pred hccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C
Q 025715 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I 92 (249)
Q Consensus 19 ~~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~ 92 (249)
..|++|+++||.++.+.|.+-.+|.+|||+|||||+|+..++++ + ..+|+|||+++... .
T Consensus 63 ~~yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-g-------------a~~V~aVDvs~~mL~~a~r~~ 128 (291)
T 3hp7_A 63 LRYVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-G-------------AKLVYAVDVGTNQLVWKLRQD 128 (291)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEECSSSSCSCHHHHTC
T ss_pred cccccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-C-------------CCEEEEEECCHHHHHHHHHhC
Confidence 46999999999999999987677899999999999999998876 3 36999999998431 1
Q ss_pred CCceEe-ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE---e
Q 025715 93 EGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI---F 168 (249)
Q Consensus 93 ~~v~~~-~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~---~ 168 (249)
+++... ..|+..... +.++..+||+|++|.++.. . ..++..+.++|+|||.|++.+ |
T Consensus 129 ~rv~~~~~~ni~~l~~-----~~l~~~~fD~v~~d~sf~s-----l---------~~vL~e~~rvLkpGG~lv~lvkPqf 189 (291)
T 3hp7_A 129 DRVRSMEQYNFRYAEP-----VDFTEGLPSFASIDVSFIS-----L---------NLILPALAKILVDGGQVVALVKPQF 189 (291)
T ss_dssp TTEEEECSCCGGGCCG-----GGCTTCCCSEEEECCSSSC-----G---------GGTHHHHHHHSCTTCEEEEEECGGG
T ss_pred cccceecccCceecch-----hhCCCCCCCEEEEEeeHhh-----H---------HHHHHHHHHHcCcCCEEEEEECccc
Confidence 343222 334433221 1234446999999987542 1 246788899999999999852 2
Q ss_pred cCC------------------CHHHHHHHHhcC-CCeeEE-ecCCCCCCCCceEEEEEee
Q 025715 169 RGK------------------DTSLLYCQLKLF-FPVVTF-AKPKSSRNSSIEAFAVCEN 208 (249)
Q Consensus 169 ~~~------------------~~~~l~~~l~~~-f~~v~~-~kP~~sr~~s~E~y~v~~g 208 (249)
... ...++...+... |....+ ..|......|.|..+.++.
T Consensus 190 e~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 190 EAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp TSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred ccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 111 011233333332 554444 4577777889987766654
No 22
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.46 E-value=1e-13 Score=127.97 Aligned_cols=125 Identities=21% Similarity=0.292 Sum_probs=92.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
++|.+|||+|||||+++.+++++++ ..+.|+|+|+++.+ .+.++.++++|..+..
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~------------~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~-- 169 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMK------------GKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV-- 169 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHT------------TCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH--
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh--
Confidence 6789999999999999999999886 45899999999842 2456778888875532
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCH-----------HHHHHHHHHHHHHHHHhccCCCEEEEEEec---CCCHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDE-----------FVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTS 174 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~-----------~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~---~~~~~ 174 (249)
..+ .++||+|++|++++..|....+. .....++..++..|.++|||||.|++.+++ .++..
T Consensus 170 ----~~~-~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~ 244 (456)
T 3m4x_A 170 ----PHF-SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEE 244 (456)
T ss_dssp ----HHH-TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHH
T ss_pred ----hhc-cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHH
Confidence 122 36899999999776655432222 122456678999999999999999987774 23445
Q ss_pred HHHHHHhcC
Q 025715 175 LLYCQLKLF 183 (249)
Q Consensus 175 ~l~~~l~~~ 183 (249)
.+.++++++
T Consensus 245 vv~~~l~~~ 253 (456)
T 3m4x_A 245 IISWLVENY 253 (456)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhC
Confidence 566666654
No 23
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.46 E-value=2.9e-13 Score=119.38 Aligned_cols=123 Identities=19% Similarity=0.170 Sum_probs=89.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
++|.+|||+|||||+++.++++.++ +.++|+|+|+++.+ .+++++++++|+.+...
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~------------~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~- 183 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMR------------NDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE- 183 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC------------CCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-
Confidence 5789999999999999999999875 35899999999842 24578899999877531
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCc--------CH---HHHHHHHHHHHHHHHHhccCCCEEEEEEecC---CCHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDM--------DE---FVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTS 174 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~--------~~---~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~---~~~~ 174 (249)
. .++||+|++|+++...|.... .. .....++..++..+.++|||||.|++.++.. ++..
T Consensus 184 ------~-~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~ 256 (315)
T 1ixk_A 184 ------L-NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEF 256 (315)
T ss_dssp ------G-CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHH
T ss_pred ------c-cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHH
Confidence 1 358999999987655553211 11 1123456788999999999999999977642 3344
Q ss_pred HHHHHHhc
Q 025715 175 LLYCQLKL 182 (249)
Q Consensus 175 ~l~~~l~~ 182 (249)
.+..++++
T Consensus 257 ~v~~~l~~ 264 (315)
T 1ixk_A 257 VIQWALDN 264 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 45566665
No 24
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.46 E-value=2.2e-13 Score=126.65 Aligned_cols=124 Identities=17% Similarity=0.166 Sum_probs=91.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~~ 109 (249)
+|.+|||+|||||+++.+++++++ +.+.|+|+|+++.+ .+.++.++++|..+...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~------------~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~-- 182 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN------------NEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA-- 182 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT------------TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH--
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh--
Confidence 889999999999999999999885 35899999999842 24578889999987431
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCC--------CcCH---HHHHHHHHHHHHHHHHhccCCCEEEEEEec---CCCHHH
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLH--------DMDE---FVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTSL 175 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~--------~~~~---~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~---~~~~~~ 175 (249)
. ..++||+|++|++++..|.. .+.. .....++..++..|.++|||||.||+.+++ .++...
T Consensus 183 ----~-~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~v 257 (479)
T 2frx_A 183 ----A-VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAV 257 (479)
T ss_dssp ----H-STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHH
T ss_pred ----h-ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHH
Confidence 1 23689999999876544421 1111 123446678899999999999999998774 234445
Q ss_pred HHHHHhcC
Q 025715 176 LYCQLKLF 183 (249)
Q Consensus 176 l~~~l~~~ 183 (249)
+.++++++
T Consensus 258 v~~~l~~~ 265 (479)
T 2frx_A 258 CLWLKETY 265 (479)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHC
Confidence 55666655
No 25
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.44 E-value=1.1e-13 Score=127.83 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=90.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
++|.+|||+|||||+++.+++++++ ..+.|+|+|+++.+ .+. +.++++|..+..
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~------------~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~-- 164 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMG------------GKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALA-- 164 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHH--
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhh--
Confidence 5789999999999999999999886 45899999999843 134 778888876532
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCC----------cC-HHHHHHHHHHHHHHHHHhccCCCEEEEEEec---CCCHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHD----------MD-EFVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTS 174 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~----------~~-~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~---~~~~~ 174 (249)
..+ .++||+|++|++++..|... .+ ......++..++..+.++|||||.|++.+++ .++..
T Consensus 165 ----~~~-~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~ 239 (464)
T 3m6w_A 165 ----EAF-GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEG 239 (464)
T ss_dssp ----HHH-CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHH
T ss_pred ----hhc-cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHH
Confidence 112 36899999998765544311 11 1223456788999999999999999987774 23445
Q ss_pred HHHHHHhcC
Q 025715 175 LLYCQLKLF 183 (249)
Q Consensus 175 ~l~~~l~~~ 183 (249)
.+.++++++
T Consensus 240 vv~~~l~~~ 248 (464)
T 3m6w_A 240 VVAHFLKAH 248 (464)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHC
Confidence 566666654
No 26
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.42 E-value=7.5e-13 Score=111.91 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=78.3
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~ 109 (249)
++||++|||||||+|.++.++++.++ +.|+|+|+|+++.. ..+|+..+.+|..++...
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG------------~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~- 141 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIG------------PRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKY- 141 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC------------TTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGG-
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhC------------CCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccc-
Confidence 48999999999999999999999997 67999999999732 246888899999886531
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
.+...++|+|++|.... +. ...++..+.+.|||||.+++.+
T Consensus 142 ----~~~~~~vDvVf~d~~~~-------~~------~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 142 ----RHLVEGVDGLYADVAQP-------EQ------AAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ----TTTCCCEEEEEECCCCT-------TH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----ccccceEEEEEEeccCC-------hh------HHHHHHHHHHhccCCCEEEEEE
Confidence 12346899999986421 11 1246788899999999999854
No 27
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.39 E-value=3.6e-13 Score=116.33 Aligned_cols=128 Identities=16% Similarity=0.207 Sum_probs=85.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
++|.+|||+|||||+++..+++.++ ..++|+|+|+++.+ .+++++++++|+.+...
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~------------~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~- 148 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMK------------NKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKD- 148 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTT------------TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHH-
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC------------CCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcch-
Confidence 5789999999999999999999875 34799999999742 23578888998865421
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcC----HHHH---HHHHHHHHHHHHHhccCCCEEEEEEecC---CCHHHHHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMD----EFVQ---SQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTSLLYC 178 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~----~~~~---~~l~~~~l~~a~~~Lk~gG~lv~k~~~~---~~~~~l~~ 178 (249)
.+. ...++||+|++|+++...|....+ .... ..++..++..+.++|||||.|++.++.. ++...+.+
T Consensus 149 -~~~--~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~ 225 (274)
T 3ajd_A 149 -YLL--KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKY 225 (274)
T ss_dssp -HHH--HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHH
T ss_pred -hhh--hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHH
Confidence 000 024689999999866544432111 1111 1234678899999999999999987642 34445556
Q ss_pred HHhcC
Q 025715 179 QLKLF 183 (249)
Q Consensus 179 ~l~~~ 183 (249)
+++.+
T Consensus 226 ~l~~~ 230 (274)
T 3ajd_A 226 ILQKR 230 (274)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 66554
No 28
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.39 E-value=2.2e-12 Score=113.55 Aligned_cols=131 Identities=14% Similarity=0.113 Sum_probs=90.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
++|.+|||+|||||+++.++++.++ +.++|+|+|+++.+ .+.+++++++|+.+...
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~------------~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~- 167 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLK------------NQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSP- 167 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCT-
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCc-
Confidence 5789999999999999999999875 45899999999842 24578889999876421
Q ss_pred HHHHHhcC-CCcccEEEeCCCCCCCCCCCc--C-----------HHHHHHHHHHHHHHHHHhccCCCEEEEEEec---CC
Q 025715 109 EVVIRHFD-GCKADLVVCDGAPDVTGLHDM--D-----------EFVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GK 171 (249)
Q Consensus 109 ~~i~~~~~-~~~~DlVlsD~~~~~~g~~~~--~-----------~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~---~~ 171 (249)
... ..+||.|++|+++...|.... + -.....++..+|..|.++|+ ||.||+.+++ .+
T Consensus 168 -----~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~E 241 (309)
T 2b9e_A 168 -----SDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEE 241 (309)
T ss_dssp -----TCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGG
T ss_pred -----cccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHH
Confidence 000 147999999997766554211 1 12234466778889998887 9999987764 34
Q ss_pred CHHHHHHHHhcCCCeeEE
Q 025715 172 DTSLLYCQLKLFFPVVTF 189 (249)
Q Consensus 172 ~~~~l~~~l~~~f~~v~~ 189 (249)
+...+.++++++...+..
T Consensus 242 ne~~v~~~l~~~~~~~~~ 259 (309)
T 2b9e_A 242 NEDVVRDALQQNPGAFRL 259 (309)
T ss_dssp THHHHHHHHTTSTTTEEE
T ss_pred hHHHHHHHHHhCCCcEEE
Confidence 455666777765332333
No 29
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.39 E-value=1.3e-12 Score=120.58 Aligned_cols=126 Identities=24% Similarity=0.210 Sum_probs=92.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
++|.+|||+|||||+++..+++.++ ..+.|+|+|+++.+ .+.+++++++|+.+...
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~------------~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~- 324 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMK------------NKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPE- 324 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSS-
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC------------CCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcch-
Confidence 5789999999999999999999875 34799999999842 24578889999877431
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCC--cC---------HHHHHHHHHHHHHHHHHhccCCCEEEEEEecC---CCHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHD--MD---------EFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTS 174 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~--~~---------~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~---~~~~ 174 (249)
.+.+++||+|++|+++...|... .+ ......++..++..+.++|||||.|++.++.. ++..
T Consensus 325 -----~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~ 399 (450)
T 2yxl_A 325 -----IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEK 399 (450)
T ss_dssp -----SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHH
T ss_pred -----hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHH
Confidence 13346899999998766555321 11 12234456788999999999999999877743 3444
Q ss_pred HHHHHHhcC
Q 025715 175 LLYCQLKLF 183 (249)
Q Consensus 175 ~l~~~l~~~ 183 (249)
.+..++..+
T Consensus 400 ~v~~~l~~~ 408 (450)
T 2yxl_A 400 NIRWFLNVH 408 (450)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 566667654
No 30
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.37 E-value=1.4e-11 Score=106.11 Aligned_cols=142 Identities=17% Similarity=0.125 Sum_probs=98.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.. .+++++++++|+.+.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-------------~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--- 171 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-------------DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--- 171 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-------------TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG---
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh---
Confidence 4678999999999999999998764 4799999999742 235788999998763
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCC---------CCc-----CHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGL---------HDM-----DEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS 174 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~---------~~~-----~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~ 174 (249)
+..++||+|++|++....+. +.. ............+..+.++|+|||.+++.. ......
T Consensus 172 ------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~ 244 (276)
T 2b3t_A 172 ------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH-GWQQGE 244 (276)
T ss_dssp ------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC-CSSCHH
T ss_pred ------cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE-CchHHH
Confidence 23468999999975432211 000 001112345678889999999999999853 334455
Q ss_pred HHHHHHhcC-CCeeEEecCCCCCCCCceEEEEEee
Q 025715 175 LLYCQLKLF-FPVVTFAKPKSSRNSSIEAFAVCEN 208 (249)
Q Consensus 175 ~l~~~l~~~-f~~v~~~kP~~sr~~s~E~y~v~~g 208 (249)
++...++.. |..+.+.+....+ +++++++.
T Consensus 245 ~~~~~l~~~Gf~~v~~~~d~~g~----~r~~~~~~ 275 (276)
T 2b3t_A 245 AVRQAFILAGYHDVETCRDYGDN----ERVTLGRY 275 (276)
T ss_dssp HHHHHHHHTTCTTCCEEECTTSS----EEEEEEEC
T ss_pred HHHHHHHHCCCcEEEEEecCCCC----CcEEEEEE
Confidence 666666554 8878777665544 56777653
No 31
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.37 E-value=2e-12 Score=104.28 Aligned_cols=107 Identities=17% Similarity=0.164 Sum_probs=73.1
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~ 107 (249)
++++.+|||+|||+|.++..++++ + ++|+|+|+++.. .+++++++++|..+..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~--------------~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~- 83 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-S--------------KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD- 83 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-S--------------SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG-
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH-
Confidence 468899999999999999999876 4 799999999842 2367888887766532
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
.+.+++||+|+++...-..+..... ........++..+.++|||||.+++.++.
T Consensus 84 ------~~~~~~fD~v~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 84 ------HYVREPIRAAIFNLGYLPSADKSVI--TKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ------GTCCSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred ------hhccCCcCEEEEeCCCCCCcchhcc--cChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 1235789999998422111110000 01122345788899999999999998775
No 32
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.36 E-value=2.3e-12 Score=105.48 Aligned_cols=151 Identities=15% Similarity=-0.052 Sum_probs=90.8
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------CC----CceEeecCCCChhhH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IE----GVIQVQGDITNARTA 108 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~~----~v~~~~gDi~~~~~~ 108 (249)
..++.+|||+|||+|.++..+++..+ ..+|+|+|+++... .. +++++++|+.+..
T Consensus 28 ~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 92 (215)
T 4dzr_A 28 MPSGTRVIDVGTGSGCIAVSIALACP-------------GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWL-- 92 (215)
T ss_dssp CCTTEEEEEEESSBCHHHHHHHHHCT-------------TEEEEEEECC-------------------CCHHHHHHHH--
T ss_pred cCCCCEEEEecCCHhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhh--
Confidence 36789999999999999999998753 46999999998431 11 4566677765521
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCC-CcCHHH--------------HHHHHHHHHHHHHHhccCCCEEEEEEecCCCH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLH-DMDEFV--------------QSQLILAGLTVVTHVLKEGGKFIAKIFRGKDT 173 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~-~~~~~~--------------~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~ 173 (249)
... ....++||+|++|+++...+.. ...... ....+...+..+.++|||||.+++-.+.....
T Consensus 93 ~~~--~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 170 (215)
T 4dzr_A 93 IER--AERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQA 170 (215)
T ss_dssp HHH--HHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCH
T ss_pred hhh--hhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccH
Confidence 000 0123789999999765332211 000000 01122567888899999999944435555556
Q ss_pred HHHHHHHh---cCCCeeEEecCCCCCCCCceEEEEEeecc
Q 025715 174 SLLYCQLK---LFFPVVTFAKPKSSRNSSIEAFAVCENYF 210 (249)
Q Consensus 174 ~~l~~~l~---~~f~~v~~~kP~~sr~~s~E~y~v~~g~~ 210 (249)
..+...+. .-|..+.+.+....+ +++++++...
T Consensus 171 ~~~~~~l~~~~~gf~~~~~~~~~~~~----~r~~~~~~~~ 206 (215)
T 4dzr_A 171 DEVARLFAPWRERGFRVRKVKDLRGI----DRVIAVTREP 206 (215)
T ss_dssp HHHHHHTGGGGGGTEECCEEECTTSC----EEEEEEEECC
T ss_pred HHHHHHHHHhhcCCceEEEEEecCCC----EEEEEEEEcC
Confidence 66666665 347777777655543 5777766543
No 33
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.35 E-value=2.2e-12 Score=110.79 Aligned_cols=102 Identities=23% Similarity=0.188 Sum_probs=76.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------CCCCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------~~~~v~~~~gDi~~~~ 106 (249)
+++|.+|||||||+|.++..++++.+. ++.+|+|+|+++.. ...+++++++|+.+.+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~-----------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~ 136 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHH-----------DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA 136 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCS-----------SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCC-----------CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc
Confidence 579999999999999999999987642 35699999999731 1236899999998753
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
.+.+|+|++...... ..... ...++..+.++|||||.|++.....
T Consensus 137 ----------~~~~d~v~~~~~l~~-----~~~~~----~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 137 ----------IENASMVVLNFTLQF-----LEPSE----RQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp ----------CCSEEEEEEESCGGG-----SCHHH----HHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred ----------ccccccceeeeeeee-----cCchh----HhHHHHHHHHHcCCCcEEEEEeccC
Confidence 357999999764332 12111 1356888999999999999875543
No 34
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.35 E-value=1.3e-12 Score=117.15 Aligned_cols=123 Identities=21% Similarity=0.173 Sum_probs=86.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------------CCCceEeecCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------------IEGVIQVQGDI 102 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------------~~~v~~~~gDi 102 (249)
++|.+|||+||||||.|.++++.+. .+.|+|+|+++.+. ..++.....|.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~-------------~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGC-------------CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTC-------------EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG
T ss_pred CCCCEEEEecCCccHHHHHHHHhcC-------------CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch
Confidence 6899999999999999999998653 47899999997320 12456666776
Q ss_pred CChhhHHHHHHhcCCCcccEEEeCCCCCCC--CC--CC------cCHHH---HHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVT--GL--HD------MDEFV---QSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~--g~--~~------~~~~~---~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
.... ....+.||.|+.|.+++.. |. ++ ..... ...++..+|..|.++|||||.||..+++
T Consensus 214 ~~~~-------~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 214 RKWG-------ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp GGHH-------HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred hhcc-------hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 6532 1234789999999976643 21 11 11111 2446788999999999999999988885
Q ss_pred --C-CCHHHHHHHHhc
Q 025715 170 --G-KDTSLLYCQLKL 182 (249)
Q Consensus 170 --~-~~~~~l~~~l~~ 182 (249)
+ ++...+.++++.
T Consensus 287 l~~~ENE~vV~~~L~~ 302 (359)
T 4fzv_A 287 LSHLQNEYVVQGAIEL 302 (359)
T ss_dssp CCTTTTHHHHHHHHHH
T ss_pred CchhhCHHHHHHHHHh
Confidence 3 344445556654
No 35
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.35 E-value=7.6e-12 Score=114.66 Aligned_cols=125 Identities=21% Similarity=0.204 Sum_probs=90.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C----CCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I----EGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~----~~v~~~~gDi~~~~~~~ 109 (249)
++|.+|||+|||||+++..+++.++ .+.|+|+|+++... + -+++++++|..+...
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~-------------~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~-- 309 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAP-------------EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ-- 309 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCT-------------TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH--
T ss_pred CCcCeEEEECCCchHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh--
Confidence 5789999999999999999999874 48999999998641 0 146788999987531
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCC--CcC---------HHHHHHHHHHHHHHHHHhccCCCEEEEEEecC---CCHHH
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLH--DMD---------EFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTSL 175 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~--~~~---------~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~---~~~~~ 175 (249)
.+.+++||+|++|+++...|.. +.+ ......++..++..+.++|||||.+++.++.- ++...
T Consensus 310 ----~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~ 385 (429)
T 1sqg_A 310 ----WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 (429)
T ss_dssp ----HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHH
T ss_pred ----hcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHH
Confidence 2345689999999876655432 111 11234456788999999999999999987642 34445
Q ss_pred HHHHHhcC
Q 025715 176 LYCQLKLF 183 (249)
Q Consensus 176 l~~~l~~~ 183 (249)
+..++..+
T Consensus 386 v~~~l~~~ 393 (429)
T 1sqg_A 386 IKAFLQRT 393 (429)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 66666654
No 36
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.33 E-value=9.2e-12 Score=103.77 Aligned_cols=132 Identities=11% Similarity=-0.041 Sum_probs=87.2
Q ss_pred ccCCCeEEEEcCC-CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~g-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~ 106 (249)
++++.+|||+||| +|.++..+++..+ .+|+|+|+++.. .+ +++++++|+....
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 117 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFN--------------CKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIK 117 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHC--------------CEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSST
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcC--------------CEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhh
Confidence 4688999999999 9999999988753 799999999842 12 6889999975432
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHH--------HHHHHHHHHHHHHHhccCCCEEEEEEecC-CCHHHHH
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFV--------QSQLILAGLTVVTHVLKEGGKFIAKIFRG-KDTSLLY 177 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~--------~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~-~~~~~l~ 177 (249)
.+.+++||+|++|++....+.....+.. .......++..+.++|||||.+++.+... ....++.
T Consensus 118 -------~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 190 (230)
T 3evz_A 118 -------GVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIK 190 (230)
T ss_dssp -------TTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHH
T ss_pred -------hcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHH
Confidence 1345789999999764332211110000 01223567889999999999999865443 3345666
Q ss_pred HHHhcCCCeeEEecC
Q 025715 178 CQLKLFFPVVTFAKP 192 (249)
Q Consensus 178 ~~l~~~f~~v~~~kP 192 (249)
..+++.--.+...+.
T Consensus 191 ~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 191 ERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHcCCceEEEEe
Confidence 666655324544443
No 37
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.33 E-value=1.1e-11 Score=100.81 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=78.5
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~ 106 (249)
++++.+|||+|||+|.++..++++.+ +.++|+|+|+++.. .+ ++++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVG------------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHC------------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh
Confidence 36889999999999999999999875 35799999999742 12 56889999987643
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCC-CcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLH-DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~-~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
. +.+++||+|++|++....+.. ..... ......+..+.++|||||.+++..+.
T Consensus 88 ~-------~~~~~fD~v~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 88 K-------YIDCPVKAVMFNLGYLPSGDHSISTRP---ETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp G-------TCCSCEEEEEEEESBCTTSCTTCBCCH---HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred h-------hccCCceEEEEcCCcccCcccccccCc---ccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 1 234789999999753111111 11111 11234788899999999999997764
No 38
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.33 E-value=5.3e-12 Score=108.25 Aligned_cols=95 Identities=15% Similarity=0.079 Sum_probs=74.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC-----CCCCCceEeecCCCChhhHHHHHHh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~-----~~~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
..+.+|||+|||+|.++..++++. .+|+|+|+++. ...+++++.++|+.+.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~---------------~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~-------- 94 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF---------------ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTG-------- 94 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC---------------SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCC--------
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC---------------CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhc--------
Confidence 345799999999999999998753 58999999973 23578999999998754
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+.+++||+|++..+..+. +. ..++..+.++|||||.|++-.+.
T Consensus 95 ~~~~sfD~v~~~~~~h~~-----~~-------~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWF-----DL-------DRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp CCSSCEEEEEECSCCTTC-----CH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCcccEEEEeeehhHh-----hH-------HHHHHHHHHHcCCCCEEEEEECC
Confidence 467899999997665432 32 24678899999999999986664
No 39
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.32 E-value=6e-12 Score=101.23 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=88.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCC--ceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG--VIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~--v~~~~gDi~~~~ 106 (249)
+++.+|||+|||+|.++..+++. + ..|+++|+++.. .+++ ++++++|+.+..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~--------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-V--------------KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-S--------------SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 47889999999999999998876 4 699999999732 2344 889999987732
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcCCCe
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPV 186 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~f~~ 186 (249)
..++||+|++++.... . .......+..+.++|+|||.+++.........++...+++.|..
T Consensus 116 ---------~~~~~D~v~~~~~~~~------~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~ 176 (194)
T 1dus_A 116 ---------KDRKYNKIITNPPIRA------G----KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGN 176 (194)
T ss_dssp ---------TTSCEEEEEECCCSTT------C----HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSC
T ss_pred ---------ccCCceEEEECCCccc------c----hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcc
Confidence 3468999999875321 1 11234578888999999999999877665555677777777877
Q ss_pred eEEec
Q 025715 187 VTFAK 191 (249)
Q Consensus 187 v~~~k 191 (249)
+.+.+
T Consensus 177 ~~~~~ 181 (194)
T 1dus_A 177 VETVT 181 (194)
T ss_dssp CEEEE
T ss_pred eEEEe
Confidence 77653
No 40
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=1.8e-12 Score=111.93 Aligned_cols=135 Identities=16% Similarity=0.036 Sum_probs=94.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~ 107 (249)
+.++.+|||+|||+|.++..+++..+ .++|+|+|+++.+ .+.++.++++|+.+.+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~-------------~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~- 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSK-------------PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE- 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC-------------CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-
Confidence 56889999999999999999998753 4799999999742 2457889999987641
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC-----CCHHHHHHHHhc
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG-----KDTSLLYCQLKL 182 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~-----~~~~~l~~~l~~ 182 (249)
..++||+|++|++.. . ...+..+.+.|+|||.+++..+.. +...+....+..
T Consensus 183 --------~~~~~D~Vi~d~p~~------~---------~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T 3a27_A 183 --------LKDVADRVIMGYVHK------T---------HKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAE 239 (272)
T ss_dssp --------CTTCEEEEEECCCSS------G---------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHH
T ss_pred --------ccCCceEEEECCccc------H---------HHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHH
Confidence 135899999997531 1 135677889999999999887743 233444444443
Q ss_pred C-CCeeEEecCCCCCCCCceEEEEEeecc
Q 025715 183 F-FPVVTFAKPKSSRNSSIEAFAVCENYF 210 (249)
Q Consensus 183 ~-f~~v~~~kP~~sr~~s~E~y~v~~g~~ 210 (249)
. ...+........|..+...|.+|..|+
T Consensus 240 ~~~~~~~~~~~~~v~~~~p~~~~~~~d~~ 268 (272)
T 3a27_A 240 KNGYKLIDYEVRKIKKYAPGVWHVVVDAK 268 (272)
T ss_dssp HTTEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HhCCeeEEeEEEEEEEECCCCCEEEEEEE
Confidence 3 234444444444444455777777765
No 41
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.31 E-value=1.6e-11 Score=100.21 Aligned_cols=136 Identities=15% Similarity=0.129 Sum_probs=94.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHHh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
.+.+|||+|||+|.++..++++ + .+|+|+|+++.. ..++++++++|+.+.+
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-------- 97 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASL-G--------------HQIEGLEPATRLVELARQTHPSVTFHHGTITDLS-------- 97 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHT-T--------------CCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGG--------
T ss_pred CCCeEEEecCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccc--------
Confidence 3789999999999999999875 3 589999999742 1468899999998753
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC---------------CHHHHHHH
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK---------------DTSLLYCQ 179 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~---------------~~~~l~~~ 179 (249)
+.+++||+|++......... .+ ...++..+.++|+|||.+++.++... ...++...
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~--~~-------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (203)
T 3h2b_A 98 DSPKRWAGLLAWYSLIHMGP--GE-------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQA 168 (203)
T ss_dssp GSCCCEEEEEEESSSTTCCT--TT-------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHH
T ss_pred cCCCCeEEEEehhhHhcCCH--HH-------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHH
Confidence 35679999999865443211 12 23578888999999999999876432 35667776
Q ss_pred HhcC-CCeeEEecCCCCCCCCceEEEEEeeccCC
Q 025715 180 LKLF-FPVVTFAKPKSSRNSSIEAFAVCENYFPP 212 (249)
Q Consensus 180 l~~~-f~~v~~~kP~~sr~~s~E~y~v~~g~~~~ 212 (249)
++.. |+.+.+..-.. ....+++.......
T Consensus 169 l~~~Gf~~~~~~~~~~----~p~~~l~~~~~~~~ 198 (203)
T 3h2b_A 169 LETAGFQVTSSHWDPR----FPHAYLTAEASLEH 198 (203)
T ss_dssp HHHTTEEEEEEEECTT----SSEEEEEEEECC--
T ss_pred HHHCCCcEEEEEecCC----Ccchhhhhhhhhhh
Confidence 6654 77666542212 33566665554443
No 42
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.31 E-value=8.4e-12 Score=105.39 Aligned_cols=157 Identities=19% Similarity=0.200 Sum_probs=98.8
Q ss_pred hccchhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C
Q 025715 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I 92 (249)
Q Consensus 19 ~~~~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~ 92 (249)
..|.+|+++||.++.+.+..-.++.+|||+|||+|.++..++++ + ..+|+|+|+++... .
T Consensus 15 ~~yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g-------------~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 15 LRYVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-G-------------AKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEECSSCCCCCHHHHTC
T ss_pred CCccCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-C-------------CCEEEEEcCCHHHHHHHHHhC
Confidence 36999999999999999987667889999999999999999876 3 25999999998541 1
Q ss_pred CCceEe-ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE---e
Q 025715 93 EGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI---F 168 (249)
Q Consensus 93 ~~v~~~-~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~---~ 168 (249)
+++... ..++..... ..+....+|.+.+|..+... ..++..+.++|||||.|++.+ |
T Consensus 81 ~~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~D~v~~~l--------------~~~l~~i~rvLkpgG~lv~~~~p~~ 141 (232)
T 3opn_A 81 ERVVVMEQFNFRNAVL-----ADFEQGRPSFTSIDVSFISL--------------DLILPPLYEILEKNGEVAALIKPQF 141 (232)
T ss_dssp TTEEEECSCCGGGCCG-----GGCCSCCCSEEEECCSSSCG--------------GGTHHHHHHHSCTTCEEEEEECHHH
T ss_pred ccccccccceEEEeCH-----hHcCcCCCCEEEEEEEhhhH--------------HHHHHHHHHhccCCCEEEEEECccc
Confidence 222111 112211100 11222236777777654321 246888999999999999853 1
Q ss_pred cCC-----------C-------HHHHHHHHhc-CCCeeEE-ecCCCCCCCCceEEEEEee
Q 025715 169 RGK-----------D-------TSLLYCQLKL-FFPVVTF-AKPKSSRNSSIEAFAVCEN 208 (249)
Q Consensus 169 ~~~-----------~-------~~~l~~~l~~-~f~~v~~-~kP~~sr~~s~E~y~v~~g 208 (249)
... + ..++..++.. -|..+.+ ..|......+.|..+.++.
T Consensus 142 e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 142 EAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp HSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCBTTTBCCEEEEEEE
T ss_pred ccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCCCCCCHHHHHHHhh
Confidence 110 0 1133333433 2655544 3555556667776666554
No 43
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.30 E-value=2e-11 Score=100.11 Aligned_cols=110 Identities=17% Similarity=0.064 Sum_probs=82.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
+++.+|||+|||+|.++..+++..+ ..+|+++|+++.. .+++++++++|+.+...
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 104 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMP-------------NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD- 104 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCT-------------TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-
Confidence 6789999999999999999998753 5799999999842 23678899999865321
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-C
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-F 184 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f 184 (249)
...+||+|++++... + ....+..+.++|+|||.+++..........+...++.. |
T Consensus 105 -------~~~~~D~i~~~~~~~-------~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 105 -------DLPDPDRVFIGGSGG-------M-------LEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp -------TSCCCSEEEESCCTT-------C-------HHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred -------cCCCCCEEEECCCCc-------C-------HHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 125799999987532 1 13578889999999999999766555555666666543 5
No 44
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.29 E-value=7.7e-12 Score=105.11 Aligned_cols=109 Identities=12% Similarity=0.113 Sum_probs=78.2
Q ss_pred hhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---CCCceEeecCCCChhhHHH
Q 025715 34 EEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 34 ~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---~~~v~~~~gDi~~~~~~~~ 110 (249)
.....++++.+|||+|||+|.++..+++. + .+|+|+|+++... ..+++++.+|+.+.
T Consensus 34 ~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~----- 93 (240)
T 3dli_A 34 RYIPYFKGCRRVLDIGCGRGEFLELCKEE-G--------------IESIGVDINEDMIKFCEGKFNVVKSDAIEY----- 93 (240)
T ss_dssp GGGGGTTTCSCEEEETCTTTHHHHHHHHH-T--------------CCEEEECSCHHHHHHHHTTSEEECSCHHHH-----
T ss_pred HHHhhhcCCCeEEEEeCCCCHHHHHHHhC-C--------------CcEEEEECCHHHHHHHHhhcceeeccHHHH-----
Confidence 33445578899999999999999988876 3 5899999997431 13377888887542
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~ 172 (249)
...+.+++||+|++......... .+ ....+..+.++|||||.+++.+.....
T Consensus 94 -~~~~~~~~fD~i~~~~~l~~~~~--~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 94 -LKSLPDKYLDGVMISHFVEHLDP--ER-------LFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp -HHTSCTTCBSEEEEESCGGGSCG--GG-------HHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred -hhhcCCCCeeEEEECCchhhCCc--HH-------HHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 12356689999999865543221 11 235788889999999999998765443
No 45
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.29 E-value=7.3e-12 Score=104.03 Aligned_cols=98 Identities=22% Similarity=0.209 Sum_probs=72.7
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~ 109 (249)
+++|.+|||+|||||.++..+++..+ .++|+|+|+++.. ...++.++.+|+.++...
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-------------~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~- 120 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-------------EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY- 120 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-------------TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-------------CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhh-
Confidence 36889999999999999999998864 4799999999831 135788888998875210
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
..+. ++||+|++|... .+. ...++..+.++|||||.|++.+
T Consensus 121 ---~~~~-~~fD~V~~~~~~-------~~~------~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 121 ---SGIV-EKVDLIYQDIAQ-------KNQ------IEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ---TTTC-CCEEEEEECCCS-------TTH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cccc-cceeEEEEeccC-------hhH------HHHHHHHHHHHhCCCCEEEEEE
Confidence 0123 689999998521 111 1234778899999999999875
No 46
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.29 E-value=1.4e-11 Score=104.17 Aligned_cols=96 Identities=20% Similarity=0.061 Sum_probs=73.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CCCCceEeecCCCChhhHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~~~v~~~~gDi~~~~~~~~i 111 (249)
.++.+|||+|||+|.++..+++... ..|+|+|+++.. ...+++++++|+.+.+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~----- 103 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA--------------KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA----- 103 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--------------SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC-----
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC--------------CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC-----
Confidence 3678999999999999999987632 499999999732 1357889999987643
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+..++||+|++....... .+. ..++..+.++|||||.+++.+.
T Consensus 104 ---~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 104 ---IEPDAYNVVLSSLALHYI----ASF-------DDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp ---CCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCCeEEEEEchhhhhh----hhH-------HHHHHHHHHHcCCCcEEEEEeC
Confidence 345799999998754332 121 3578889999999999999743
No 47
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.28 E-value=1.5e-11 Score=102.98 Aligned_cols=116 Identities=20% Similarity=0.199 Sum_probs=82.2
Q ss_pred chhhhhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CC
Q 025715 22 RARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI 92 (249)
Q Consensus 22 ~~ra~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~ 92 (249)
+++...++.+..+.+. ++++.+|||+|||+|.++..+++..+ +.++|+|+|+++.. ..
T Consensus 59 ~~~~~~~~~~~l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~g------------~~~~v~gvD~s~~~i~~~~~~a~~~ 125 (233)
T 2ipx_A 59 RSKLAAAILGGVDQIH-IKPGAKVLYLGAASGTTVSHVSDIVG------------PDGLVYAVEFSHRSGRDLINLAKKR 125 (233)
T ss_dssp TCHHHHHHHTTCSCCC-CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEECCCHHHHHHHHHHHHHC
T ss_pred chhHHHHHHhHHheec-CCCCCEEEEEcccCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHhhcc
Confidence 4444555554333333 46789999999999999999999874 35799999999631 12
Q ss_pred CCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 93 EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 93 ~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
++++++++|+.+.... .+..++||+|++|... .+. ....+..+.++|||||.+++.+.
T Consensus 126 ~~v~~~~~d~~~~~~~-----~~~~~~~D~V~~~~~~-------~~~------~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 126 TNIIPVIEDARHPHKY-----RMLIAMVDVIFADVAQ-------PDQ------TRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp TTEEEECSCTTCGGGG-----GGGCCCEEEEEECCCC-------TTH------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeEEEEcccCChhhh-----cccCCcEEEEEEcCCC-------ccH------HHHHHHHHHHHcCCCeEEEEEEc
Confidence 6889999999875311 1124689999998641 121 12346678999999999999655
No 48
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.27 E-value=2.5e-11 Score=98.37 Aligned_cols=100 Identities=16% Similarity=0.123 Sum_probs=72.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..++.+ + ..+|+|+|+++.. .+++++++++|+.+..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 106 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-------------AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV-- 106 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-------------CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH--
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-------------CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH--
Confidence 36789999999999999987764 2 3689999999732 1357889999986532
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHH--hccCCCEEEEEEec
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTH--VLKEGGKFIAKIFR 169 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~--~Lk~gG~lv~k~~~ 169 (249)
..+..++||+|++|++.... . ......+..+.+ +|+|||.+++....
T Consensus 107 ----~~~~~~~fD~i~~~~p~~~~------~----~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 107 ----AAGTTSPVDLVLADPPYNVD------S----ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp ----HHCCSSCCSEEEECCCTTSC------H----HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred ----hhccCCCccEEEECCCCCcc------h----hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 22445789999999753321 1 112345666777 99999999997654
No 49
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.27 E-value=2.7e-11 Score=109.30 Aligned_cols=105 Identities=20% Similarity=0.222 Sum_probs=78.1
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------C-----------C--CCceEee
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-----------I--EGVIQVQ 99 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~-----------~--~~v~~~~ 99 (249)
..++.+|||+|||+|.++..+++..+ +.++|+|+|+++.. . . +++++++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~ 148 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVG------------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK 148 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHT------------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhC------------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE
Confidence 35789999999999999999999875 35799999999731 0 1 5789999
Q ss_pred cCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 100 gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+|+.+..... ...+.+++||+|+++...... .+. ..++..+.++|||||.|++..+
T Consensus 149 ~d~~~l~~~~--~~~~~~~~fD~V~~~~~l~~~----~d~-------~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 149 GFIENLATAE--PEGVPDSSVDIVISNCVCNLS----TNK-------LALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp SCTTCGGGCB--SCCCCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccHHHhhhcc--cCCCCCCCEEEEEEccchhcC----CCH-------HHHHHHHHHHcCCCCEEEEEEe
Confidence 9998752100 001356799999998765432 121 3578889999999999998654
No 50
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.26 E-value=2.8e-11 Score=99.80 Aligned_cols=120 Identities=14% Similarity=0.060 Sum_probs=89.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++..+ +..+|+++|+++.. .+++++++++|+.+.+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-- 101 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVG------------EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP-- 101 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHT------------TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS--
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC--
Confidence 5788999999999999999998874 35799999999732 2357899999998753
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC------------CHHHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK------------DTSLL 176 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~------------~~~~l 176 (249)
+.+++||+|++....... .+. ..++..+.++|+|||.+++..+... ...++
T Consensus 102 ------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (219)
T 3dh0_A 102 ------LPDNTVDFIFMAFTFHEL----SEP-------LKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEV 164 (219)
T ss_dssp ------SCSSCEEEEEEESCGGGC----SSH-------HHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHH
T ss_pred ------CCCCCeeEEEeehhhhhc----CCH-------HHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHH
Confidence 355789999998654332 121 3578888999999999999765321 24566
Q ss_pred HHHHhcC-CCeeEEe
Q 025715 177 YCQLKLF-FPVVTFA 190 (249)
Q Consensus 177 ~~~l~~~-f~~v~~~ 190 (249)
...++.. |+.+...
T Consensus 165 ~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 165 GLILEDAGIRVGRVV 179 (219)
T ss_dssp HHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCEEEEEE
Confidence 6766654 8777664
No 51
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.25 E-value=1.5e-11 Score=106.32 Aligned_cols=113 Identities=15% Similarity=0.018 Sum_probs=82.0
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~ 106 (249)
+++|.+|||+|||+|+++..+++... .+|+|+|+++.. .+. +++++++|+.+..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--------------~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--------------AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--------------CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc
Confidence 36789999999999999999998743 379999999842 133 3789999998753
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC------CCHHHHHHHH
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG------KDTSLLYCQL 180 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~------~~~~~l~~~l 180 (249)
..++||+|++|+.... ...+..+.++|+|||.+++..+.+ .....+...+
T Consensus 189 ---------~~~~fD~Vi~~~p~~~---------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~ 244 (278)
T 2frn_A 189 ---------GENIADRILMGYVVRT---------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRIT 244 (278)
T ss_dssp ---------CCSCEEEEEECCCSSG---------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHH
T ss_pred ---------ccCCccEEEECCchhH---------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHH
Confidence 2578999999875321 135677899999999999977752 3345565555
Q ss_pred hcCCCeeEE
Q 025715 181 KLFFPVVTF 189 (249)
Q Consensus 181 ~~~f~~v~~ 189 (249)
+..-..+..
T Consensus 245 ~~~G~~~~~ 253 (278)
T 2frn_A 245 KEYGYDVEK 253 (278)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCeeEE
Confidence 554333333
No 52
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.24 E-value=2.8e-11 Score=99.86 Aligned_cols=105 Identities=16% Similarity=0.061 Sum_probs=79.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..++++ + ++|+|+|+++.. .++ +++++++|+.+...
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 118 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-G--------------GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA 118 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-C--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc
Confidence 57889999999999999999876 4 799999999842 234 78899999876210
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~ 183 (249)
...+||+|++++.. + .. ++..+.++|||||.+++.....++...+...++..
T Consensus 119 --------~~~~~D~v~~~~~~--------~-------~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 119 --------DLPLPEAVFIGGGG--------S-------QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp --------TSCCCSEEEECSCC--------C-------HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred --------cCCCCCEEEECCcc--------c-------HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 12479999997632 1 12 57788999999999999877666666666666543
No 53
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.24 E-value=2.6e-11 Score=102.66 Aligned_cols=98 Identities=16% Similarity=0.111 Sum_probs=76.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++..+++..+ .+|+|+|+++.. ..++++++++|+.+.+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 115 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYG--------------AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE---- 115 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC----
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC----
Confidence 6788999999999999999998764 699999999731 1267899999998753
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+.+++||+|++....... .. ......+..+.++|||||.+++..+
T Consensus 116 ----~~~~~fD~v~~~~~l~~~-----~~----~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 116 ----FPENNFDLIYSRDAILAL-----SL----ENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp ----CCTTCEEEEEEESCGGGS-----CH----HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCCCcEEEEeHHHHHHhc-----Ch----HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 346799999997654332 11 1124578889999999999999765
No 54
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.24 E-value=1.5e-11 Score=104.11 Aligned_cols=115 Identities=17% Similarity=0.139 Sum_probs=84.9
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCC-ceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG-VIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~-v~~~~gDi~~~~ 106 (249)
+.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+++ ++++++|+.+.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 157 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVG------------PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG- 157 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhC------------CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-
Confidence 36789999999999999999999865 45899999999732 2344 88999998753
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC---
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF--- 183 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~--- 183 (249)
+..++||+|++|+... ...+..+.++|+|||.+++.........++...++..
T Consensus 158 --------~~~~~~D~v~~~~~~~----------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~ 213 (255)
T 3mb5_A 158 --------IEEENVDHVILDLPQP----------------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDY 213 (255)
T ss_dssp --------CCCCSEEEEEECSSCG----------------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGG
T ss_pred --------cCCCCcCEEEECCCCH----------------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 3557899999986321 1357788999999999998654434445555555543
Q ss_pred CCeeEEe
Q 025715 184 FPVVTFA 190 (249)
Q Consensus 184 f~~v~~~ 190 (249)
|..+..+
T Consensus 214 f~~~~~~ 220 (255)
T 3mb5_A 214 FMKPRTI 220 (255)
T ss_dssp BSCCEEE
T ss_pred ccccEEE
Confidence 7666654
No 55
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.23 E-value=4.3e-11 Score=104.09 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=77.2
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~ 106 (249)
++++.+|||+|||+|.++..+++..+ .+|+|+|+++.. .++ +++++.+|+.+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-- 133 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--------------VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-- 133 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG--
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH--
Confidence 36889999999999999999998865 689999999732 122 68889999865
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCC----CcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLH----DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~----~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~ 172 (249)
+ +++||+|++.......... ..+. ....+..+.++|||||.+++..+....
T Consensus 134 --------~-~~~fD~v~~~~~~~~~~d~~~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 134 --------F-DEPVDRIVSLGAFEHFADGAGDAGFER------YDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp --------C-CCCCSEEEEESCGGGTTCCSSCCCTTH------HHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred --------c-CCCccEEEEcchHHhcCccccccchhH------HHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 2 4789999998755432111 0111 235788899999999999998775444
No 56
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.23 E-value=2.9e-11 Score=102.14 Aligned_cols=99 Identities=22% Similarity=0.259 Sum_probs=76.5
Q ss_pred cCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCC
Q 025715 36 FNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDIT 103 (249)
Q Consensus 36 ~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~ 103 (249)
..-+.++.+|||+|||+|.++..+++..+ ++|+|+|+++.. .++ +++++++|+.
T Consensus 41 l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 106 (257)
T 3f4k_A 41 INELTDDAKIADIGCGTGGQTLFLADYVK--------------GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD 106 (257)
T ss_dssp SCCCCTTCEEEEETCTTSHHHHHHHHHCC--------------SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HhcCCCCCeEEEeCCCCCHHHHHHHHhCC--------------CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 33346788999999999999999998764 599999999832 122 3889999997
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+.+ +.+++||+|++....... +. ..++..+.++|||||.+++...
T Consensus 107 ~~~--------~~~~~fD~v~~~~~l~~~-----~~-------~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 107 NLP--------FQNEELDLIWSEGAIYNI-----GF-------ERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp SCS--------SCTTCEEEEEEESCSCCC-----CH-------HHHHHHHHTTEEEEEEEEEEEE
T ss_pred hCC--------CCCCCEEEEEecChHhhc-----CH-------HHHHHHHHHHcCCCcEEEEEEe
Confidence 753 345799999998765432 21 2468889999999999998763
No 57
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.22 E-value=1.9e-10 Score=95.81 Aligned_cols=103 Identities=20% Similarity=0.142 Sum_probs=77.5
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~ 109 (249)
..++.+|||+|||+|.++..+++..+ ..+|+++|+++.. ...+++++++|+.+.+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 105 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-------------EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD--- 105 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC---
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC---
Confidence 45789999999999999999998863 4799999999732 1237889999998754
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~ 172 (249)
+. ++||+|++....... +... ...++..+.++|||||.+++..+....
T Consensus 106 -----~~-~~fD~v~~~~~l~~~-----~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 106 -----FE-EKYDMVVSALSIHHL-----EDED----KKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp -----CC-SCEEEEEEESCGGGS-----CHHH----HHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred -----CC-CCceEEEEeCccccC-----CHHH----HHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 23 789999998654322 2111 134688889999999999997765433
No 58
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.22 E-value=1.5e-10 Score=92.62 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=89.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--CCCCceEeecCCCChhhHHHHHHhcCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITNARTAEVVIRHFDG 117 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--~~~~v~~~~gDi~~~~~~~~i~~~~~~ 117 (249)
.++.+|||+|||+|.++..++++ . .|+|+|+++.. ..++++++++|+.+. +..
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~---------------~-~v~gvD~s~~~~~~~~~~~~~~~d~~~~---------~~~ 76 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR---------------N-TVVSTDLNIRALESHRGGNLVRADLLCS---------INQ 76 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT---------------S-EEEEEESCHHHHHTCSSSCEEECSTTTT---------BCG
T ss_pred CCCCeEEEeccCccHHHHHHHhc---------------C-cEEEEECCHHHHhcccCCeEEECChhhh---------ccc
Confidence 35679999999999999888753 2 89999999843 246788999999873 234
Q ss_pred CcccEEEeCCCCCCCCCCC--cCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-CCeeEEecCCC
Q 025715 118 CKADLVVCDGAPDVTGLHD--MDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPVVTFAKPKS 194 (249)
Q Consensus 118 ~~~DlVlsD~~~~~~g~~~--~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f~~v~~~kP~~ 194 (249)
++||+|++|++........ ..... ....+..+.+.| |||.+++.........++...++.. |+.+.+.+-.
T Consensus 77 ~~fD~i~~n~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~- 150 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDPIIGGGYL----GREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRK- 150 (170)
T ss_dssp GGCSEEEECCCCBTTCCCTTTBCCGG----GCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEE-
T ss_pred CCCCEEEECCCCccCCccccccCCcc----hHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeec-
Confidence 7899999997654321110 00000 012345556666 9999999776666777777777654 7766655322
Q ss_pred CCCCCceEEEEEeecc
Q 025715 195 SRNSSIEAFAVCENYF 210 (249)
Q Consensus 195 sr~~s~E~y~v~~g~~ 210 (249)
...|..++.+.++
T Consensus 151 ---~~~e~~~~~~~~~ 163 (170)
T 3q87_B 151 ---ILGETVYIIKGEK 163 (170)
T ss_dssp ---CSSSEEEEEEEEC
T ss_pred ---cCCceEEEEEEec
Confidence 2234555555544
No 59
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.21 E-value=7e-11 Score=97.67 Aligned_cols=129 Identities=10% Similarity=-0.001 Sum_probs=84.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++..+ ...|+|+|+++.. .+++++++++|+.+..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-- 104 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-------------DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT-- 104 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG--
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-------------CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH--
Confidence 4678999999999999999998764 5799999999732 2468899999998743
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc-CCCee
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL-FFPVV 187 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~-~f~~v 187 (249)
+.+..++||+|+++.+..+.. ..+....-.....+..+.++|+|||.+++.+-.......+...+.. -|..+
T Consensus 105 ----~~~~~~~~D~i~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 105 ----DYFEDGEIDRLYLNFSDPWPK---KRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp ----GTSCTTCCSEEEEESCCCCCS---GGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred ----hhcCCCCCCEEEEECCCCccc---cchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 124567899999986422211 0000000012357888899999999999865322222344444443 25554
Q ss_pred EEe
Q 025715 188 TFA 190 (249)
Q Consensus 188 ~~~ 190 (249)
...
T Consensus 178 ~~~ 180 (214)
T 1yzh_A 178 GVW 180 (214)
T ss_dssp EEE
T ss_pred ecc
Confidence 443
No 60
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.21 E-value=1.7e-10 Score=97.27 Aligned_cols=102 Identities=20% Similarity=0.270 Sum_probs=76.5
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEe
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQV 98 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~ 98 (249)
.+.+... +.++.+|||+|||+|.++..+++..+ ..|+|+|+++.. .+ +++++.
T Consensus 27 ~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~ 91 (256)
T 1nkv_A 27 TLGRVLR-MKPGTRILDLGSGSGEMLCTWARDHG--------------ITGTGIDMSSLFTAQAKRRAEELGVSERVHFI 91 (256)
T ss_dssp HHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHTC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhcC--------------CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 3344443 46889999999999999999998764 689999999732 12 368999
Q ss_pred ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
++|+.+.. + +++||+|++........ + ...++..+.++|||||.+++..
T Consensus 92 ~~d~~~~~--------~-~~~fD~V~~~~~~~~~~----~-------~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 92 HNDAAGYV--------A-NEKCDVAACVGATWIAG----G-------FAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp ESCCTTCC--------C-SSCEEEEEEESCGGGTS----S-------SHHHHHHHTTSEEEEEEEEEEE
T ss_pred ECChHhCC--------c-CCCCCEEEECCChHhcC----C-------HHHHHHHHHHHcCCCeEEEEec
Confidence 99998753 2 47899999966543221 1 1356888999999999999864
No 61
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.21 E-value=6.2e-11 Score=94.38 Aligned_cols=108 Identities=16% Similarity=0.164 Sum_probs=78.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++..+ ..+|+++|+++.. .++ ++ ++++|..+.-
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~- 88 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTP-------------QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF- 88 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSS-------------SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG-
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCC-------------CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh-
Confidence 6788999999999999999988763 4799999999832 133 56 7788875421
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~ 183 (249)
. ...++||+|+++..... ...+..+.++|+|||.+++..+..+....+...++.+
T Consensus 89 -----~-~~~~~~D~i~~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 89 -----D-DVPDNPDVIFIGGGLTA---------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQF 143 (178)
T ss_dssp -----G-GCCSCCSEEEECC-TTC---------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred -----h-ccCCCCCEEEECCcccH---------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHc
Confidence 0 11268999999865432 1367788999999999998776555555565555544
No 62
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.21 E-value=7.8e-11 Score=96.81 Aligned_cols=143 Identities=14% Similarity=0.043 Sum_probs=95.4
Q ss_pred cccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----CCCceEeecCCCChhhHHHHH
Q 025715 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 38 ~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----~~~v~~~~gDi~~~~~~~~i~ 112 (249)
.+.++.+|||+|||+|.++..+++. + ..|+++|+++... ..++.+..+|+.+.+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~------ 98 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA-G--------------FDVDATDGSPELAAEASRRLGRPVRTMLFHQLD------ 98 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC------
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc-C--------------CeEEEECCCHHHHHHHHHhcCCceEEeeeccCC------
Confidence 3467899999999999999999875 3 6999999997421 126677888887643
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC--------------CCHHHHHH
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--------------KDTSLLYC 178 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~--------------~~~~~l~~ 178 (249)
..++||+|++....... .. +-...++..+.++|||||.+++.+... .+..++..
T Consensus 99 ---~~~~fD~v~~~~~l~~~-----~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (211)
T 3e23_A 99 ---AIDAYDAVWAHACLLHV-----PR----DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRA 166 (211)
T ss_dssp ---CCSCEEEEEECSCGGGS-----CH----HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHH
T ss_pred ---CCCcEEEEEecCchhhc-----CH----HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHH
Confidence 35789999998654321 11 112457888999999999999976532 24566777
Q ss_pred HHhc-C-CCeeEEecCCCCCC-CCceEEEEEeeccCCC
Q 025715 179 QLKL-F-FPVVTFAKPKSSRN-SSIEAFAVCENYFPPE 213 (249)
Q Consensus 179 ~l~~-~-f~~v~~~kP~~sr~-~s~E~y~v~~g~~~~~ 213 (249)
+++. - |+.+.+........ ...+.++.+...+.+.
T Consensus 167 ~l~~aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 167 RYAEAGTWASVAVESSEGKGFDQELAQFLHVSVRKPEL 204 (211)
T ss_dssp HHHHHCCCSEEEEEEEEEECTTSCEEEEEEEEEECCCC
T ss_pred HHHhCCCcEEEEEEeccCCCCCCCCceEEEEEEecCcc
Confidence 7765 3 88777653222222 2234455555544443
No 63
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.20 E-value=1.9e-10 Score=94.75 Aligned_cols=119 Identities=17% Similarity=0.169 Sum_probs=83.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++..+++.. ..|+|+|+++.. ..++++++++|+.+..
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 110 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---------------KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS---- 110 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---------------EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC----
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC----
Confidence 567899999999999999998763 589999999732 2347899999998753
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec---------CCCHHHHHHHHh
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR---------GKDTSLLYCQLK 181 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~---------~~~~~~l~~~l~ 181 (249)
..++||+|++....... .+. .....++..+.++|||||.+++.+.. ......+...+.
T Consensus 111 -----~~~~fD~v~~~~~l~~~----~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (216)
T 3ofk_A 111 -----TAELFDLIVVAEVLYYL----EDM----TQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILT 177 (216)
T ss_dssp -----CSCCEEEEEEESCGGGS----SSH----HHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHH
T ss_pred -----CCCCccEEEEccHHHhC----CCH----HHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHH
Confidence 35789999998654322 121 11245788899999999999986532 123344555555
Q ss_pred cCCCeeEEe
Q 025715 182 LFFPVVTFA 190 (249)
Q Consensus 182 ~~f~~v~~~ 190 (249)
..+..+..+
T Consensus 178 ~~~~~~e~~ 186 (216)
T 3ofk_A 178 EALTEVERV 186 (216)
T ss_dssp HHSEEEEEE
T ss_pred hhccceEEE
Confidence 445555433
No 64
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.20 E-value=5.2e-11 Score=101.72 Aligned_cols=118 Identities=9% Similarity=-0.012 Sum_probs=82.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------C--------------------
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------------------- 91 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~-------------------- 91 (249)
.++.+|||+|||+|..+..++++ + ..|+|||+++.. .
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G--------------~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-G--------------HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-T--------------CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 47889999999999999999875 3 599999999731 1
Q ss_pred CCCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec--
Q 025715 92 IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR-- 169 (249)
Q Consensus 92 ~~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~-- 169 (249)
..+++++++|+.+.+. -..++||+|++.+++.... ..+ ....+..+.++|||||.|++.++.
T Consensus 132 ~~~i~~~~~D~~~l~~-------~~~~~FD~V~~~~~l~~l~--~~~-------~~~~l~~~~~~LkpGG~l~l~~~~~~ 195 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPR-------ANIGKFDRIWDRGALVAIN--PGD-------HDRYADIILSLLRKEFQYLVAVLSYD 195 (252)
T ss_dssp TSSEEEEESCTTTGGG-------GCCCCEEEEEESSSTTTSC--GGG-------HHHHHHHHHHTEEEEEEEEEEEEECC
T ss_pred CCceEEEECccccCCc-------ccCCCEEEEEEhhhhhhCC--HHH-------HHHHHHHHHHHcCCCeEEEEEEEecC
Confidence 1468899999988642 1126899999877554321 111 134678889999999999754431
Q ss_pred ---------CCCHHHHHHHHhcCCCeeE
Q 025715 170 ---------GKDTSLLYCQLKLFFPVVT 188 (249)
Q Consensus 170 ---------~~~~~~l~~~l~~~f~~v~ 188 (249)
.....++...+...|+.+.
T Consensus 196 ~~~~~g~~~~~~~~el~~~l~~~f~v~~ 223 (252)
T 2gb4_A 196 PTKHAGPPFYVPSAELKRLFGTKCSMQC 223 (252)
T ss_dssp TTSCCCSSCCCCHHHHHHHHTTTEEEEE
T ss_pred CccCCCCCCCCCHHHHHHHhhCCeEEEE
Confidence 1234567777765565443
No 65
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.20 E-value=9e-11 Score=102.49 Aligned_cols=141 Identities=17% Similarity=0.143 Sum_probs=91.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------------CCCCceEeecCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDIT 103 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------------~~~~v~~~~gDi~ 103 (249)
.++.+|||||||+|+++..+++..+ ..+|++||+++.. ..++++++.+|..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~ 148 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-------------VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT-------------CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC-------------CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH
Confidence 3468999999999999999887532 4789999999842 1247889999987
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHH-HHHHHHHHHHhccCCCEEEEEEecC----CCHHHHHH
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRG----KDTSLLYC 178 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~Lk~gG~lv~k~~~~----~~~~~l~~ 178 (249)
+.- . ...++||+|++|+..... . . ..+ ....+..+.++|+|||.|++....+ .....+..
T Consensus 149 ~~l------~-~~~~~fDvIi~D~~~p~~-~---~----~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~ 213 (294)
T 3adn_A 149 NFV------N-QTSQTFDVIISDCTDPIG-P---G----ESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHR 213 (294)
T ss_dssp C----------CCCCCEEEEEECC------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHH
T ss_pred HHH------h-hcCCCccEEEECCCCccC-c---c----hhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHH
Confidence 631 1 134689999999753221 0 0 011 1356788899999999999976432 23556677
Q ss_pred HHhcCCCeeEEec-CCCCCCCCceEEEEEee
Q 025715 179 QLKLFFPVVTFAK-PKSSRNSSIEAFAVCEN 208 (249)
Q Consensus 179 ~l~~~f~~v~~~k-P~~sr~~s~E~y~v~~g 208 (249)
.++..|..+..+. +..+-++..-.|++|..
T Consensus 214 ~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~ 244 (294)
T 3adn_A 214 KLSHYFSDVGFYQAAIPTYYGGIMTFAWATD 244 (294)
T ss_dssp HHHHHCSEEEEEEEECTTSSSSEEEEEEEES
T ss_pred HHHHHCCCeEEEEEEecccCCCceEEEEEeC
Confidence 7777898887642 22222333335666643
No 66
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.20 E-value=8.8e-11 Score=96.75 Aligned_cols=137 Identities=17% Similarity=0.191 Sum_probs=90.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----CCCCceEeecCCCChhhHHHHHHh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----~~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
.++.+|||+|||+|.++..+++. + .+|+|+|+++.. ...++.+..+|+.+.... ..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~~ 111 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR-G--------------IEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEA----KV 111 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT-T--------------CEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTT----CS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC-C--------------CEEEEEcCCHHHHHHHHHhcccccchhhHHhhccc----cc
Confidence 45689999999999999998875 3 589999999742 124566777776543100 01
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC------------------------
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG------------------------ 170 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~------------------------ 170 (249)
..+.+||+|++..... ..+. ..++..+.++|||||.+++.++..
T Consensus 112 ~~~~~fD~v~~~~~l~---~~~~---------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (227)
T 3e8s_A 112 PVGKDYDLICANFALL---HQDI---------IELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDW 179 (227)
T ss_dssp CCCCCEEEEEEESCCC---SSCC---------HHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCC
T ss_pred ccCCCccEEEECchhh---hhhH---------HHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCc
Confidence 2335699999987554 1111 246788899999999999976521
Q ss_pred -------CCHHHHHHHHhcC-CCeeEEecCCCCCCCC-ceEEEEEe
Q 025715 171 -------KDTSLLYCQLKLF-FPVVTFAKPKSSRNSS-IEAFAVCE 207 (249)
Q Consensus 171 -------~~~~~l~~~l~~~-f~~v~~~kP~~sr~~s-~E~y~v~~ 207 (249)
....++..+++.. |+.+.+..|....... ...+++++
T Consensus 180 ~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~ 225 (227)
T 3e8s_A 180 QPMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAE 225 (227)
T ss_dssp CCEEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEE
T ss_pred ccceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEee
Confidence 1345676666654 8877776554333211 23566655
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.19 E-value=4.2e-10 Score=90.32 Aligned_cols=123 Identities=15% Similarity=0.133 Sum_probs=88.2
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~ 112 (249)
+.++.+|||+|||+|.++..+++. + ..|+++|+++.. ..++++++++|+.+.+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~------ 102 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-G--------------HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ------ 102 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC------
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-C--------------CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC------
Confidence 468899999999999999998875 3 589999999742 2457889999998743
Q ss_pred HhcCCCcccEEEeCCC-CCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC--CCHHHHHHHHhcC-CCeeE
Q 025715 113 RHFDGCKADLVVCDGA-PDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--KDTSLLYCQLKLF-FPVVT 188 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~-~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~--~~~~~l~~~l~~~-f~~v~ 188 (249)
+..++||+|++++. ... .... .....+..+.++|+|||.+++..... ....++...+... |+.+.
T Consensus 103 --~~~~~~D~i~~~~~~~~~-----~~~~----~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 103 --ISETDFDLIVSAGNVMGF-----LAED----GREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp --CCCCCEEEEEECCCCGGG-----SCHH----HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEE
T ss_pred --CCCCceeEEEECCcHHhh-----cChH----HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEee
Confidence 34578999999742 211 1111 12457788899999999999976643 3566676666543 77666
Q ss_pred EecCC
Q 025715 189 FAKPK 193 (249)
Q Consensus 189 ~~kP~ 193 (249)
.....
T Consensus 172 ~~~~~ 176 (195)
T 3cgg_A 172 AFESW 176 (195)
T ss_dssp EESST
T ss_pred eeccc
Confidence 65443
No 68
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.19 E-value=4.9e-11 Score=101.26 Aligned_cols=105 Identities=22% Similarity=0.266 Sum_probs=77.1
Q ss_pred HHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceE
Q 025715 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQ 97 (249)
Q Consensus 29 L~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~ 97 (249)
+..+.+... ..++.+|||+|||+|.++..++++. .+|+++|+++.. .++++.+
T Consensus 26 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~ 89 (260)
T 1vl5_A 26 LAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFV---------------KKVVAFDLTEDILKVARAFIEGNGHQQVEY 89 (260)
T ss_dssp HHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGS---------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhC---------------CEEEEEeCCHHHHHHHHHHHHhcCCCceEE
Confidence 334444443 2578899999999999999888753 499999999732 2357889
Q ss_pred eecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 98 ~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+++|+.+.+ +.+++||+|++....... .+. ..++..+.++|||||.|++...
T Consensus 90 ~~~d~~~l~--------~~~~~fD~V~~~~~l~~~----~d~-------~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 90 VQGDAEQMP--------FTDERFHIVTCRIAAHHF----PNP-------ASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp EECCC-CCC--------SCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEecHHhCC--------CCCCCEEEEEEhhhhHhc----CCH-------HHHHHHHHHHcCCCCEEEEEEc
Confidence 999998753 356799999998654332 122 2578889999999999998654
No 69
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.19 E-value=4.3e-11 Score=98.01 Aligned_cols=113 Identities=15% Similarity=0.098 Sum_probs=84.6
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~ 107 (249)
+.++.+|||+|||+|.++..+++. + ..+|+++|+++.. ...+++++++|+.+.
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-- 121 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-G-------------AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-- 121 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--
Confidence 357899999999999999998764 3 3699999999732 233588999998763
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-CCe
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPV 186 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f~~ 186 (249)
..++||+|+++... ......+..+.++|+|||.+++..+.......+...++.. |+.
T Consensus 122 --------~~~~fD~i~~~~~~--------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 122 --------VDGKFDLIVANILA--------------EILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQI 179 (205)
T ss_dssp --------CCSCEEEEEEESCH--------------HHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEE
T ss_pred --------CCCCceEEEECCcH--------------HHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCce
Confidence 24789999998632 1124568888999999999999767666666677666654 665
Q ss_pred eEE
Q 025715 187 VTF 189 (249)
Q Consensus 187 v~~ 189 (249)
+..
T Consensus 180 ~~~ 182 (205)
T 3grz_A 180 DLK 182 (205)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 70
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.19 E-value=7.7e-11 Score=102.79 Aligned_cols=119 Identities=16% Similarity=0.223 Sum_probs=82.3
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~ 107 (249)
+++|.+|||+|||||+++..++.+.. +++|+|+|+++.. .+.+++++++|+.+.
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~-------------ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l-- 184 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVY-------------GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI-- 184 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTT-------------CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG--
T ss_pred CCCcCEEEEECCCccHHHHHHHHHcc-------------CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC--
Confidence 47899999999999999876554432 4799999999832 236789999998763
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCH---HHHHHHHhcCC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDT---SLLYCQLKLFF 184 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~---~~l~~~l~~~f 184 (249)
++++||+|+++... .+. ..++..+.++|||||.|++........ ..+......-|
T Consensus 185 --------~d~~FDvV~~~a~~-------~d~-------~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~gf 242 (298)
T 3fpf_A 185 --------DGLEFDVLMVAALA-------EPK-------RRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDITGF 242 (298)
T ss_dssp --------GGCCCSEEEECTTC-------SCH-------HHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGTTE
T ss_pred --------CCCCcCEEEECCCc-------cCH-------HHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhhhh
Confidence 24689999986531 121 257888999999999999876432110 00001122357
Q ss_pred CeeEEecCCC
Q 025715 185 PVVTFAKPKS 194 (249)
Q Consensus 185 ~~v~~~kP~~ 194 (249)
+....+.|..
T Consensus 243 ~~~~~~~p~~ 252 (298)
T 3fpf_A 243 RRAGVVLPSG 252 (298)
T ss_dssp EEEEEECCCT
T ss_pred hheeEECCCC
Confidence 7777777754
No 71
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.19 E-value=1.3e-10 Score=95.31 Aligned_cols=107 Identities=17% Similarity=0.069 Sum_probs=80.1
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------CCCCceEeecCCC
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDIT 103 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------~~~~v~~~~gDi~ 103 (249)
.+.+.+.-+.++.+|||+|||+|.++..+++. + .+|+++|+++.. ..++++++++|+.
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~ 100 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL-A--------------DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLF 100 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-S--------------SEEEEEESCHHHHHHHGGGCCTTEEEEECCTT
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHhcCCCCeEEEecccc
Confidence 34444444567789999999999999999887 4 699999999732 2367899999997
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
+. +..++||+|++....... .. ......+..+.++|+|||.+++..+..
T Consensus 101 ~~---------~~~~~~D~v~~~~~l~~~-----~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 101 DW---------TPDRQWDAVFFAHWLAHV-----PD----DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SC---------CCSSCEEEEEEESCGGGS-----CH----HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cC---------CCCCceeEEEEechhhcC-----CH----HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 74 246799999997654321 21 112457888899999999999987754
No 72
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.19 E-value=1.4e-10 Score=101.32 Aligned_cols=102 Identities=14% Similarity=0.144 Sum_probs=78.2
Q ss_pred hhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeec
Q 025715 33 DEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQG 100 (249)
Q Consensus 33 ~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~g 100 (249)
.+.+.-+.++.+|||+|||+|.++..++++.+ .+|+|+|+++.. .+ .+++++.+
T Consensus 109 ~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 174 (312)
T 3vc1_A 109 MDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG--------------SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC 174 (312)
T ss_dssp HTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHhccCCCCCEEEEecCCCCHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 33444346889999999999999999998754 699999999732 12 36899999
Q ss_pred CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 101 Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
|+.+.+ +.+++||+|++....... + ....+..+.++|||||.+++...
T Consensus 175 d~~~~~--------~~~~~fD~V~~~~~l~~~-----~-------~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 175 NMLDTP--------FDKGAVTASWNNESTMYV-----D-------LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp CTTSCC--------CCTTCEEEEEEESCGGGS-----C-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ChhcCC--------CCCCCEeEEEECCchhhC-----C-------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 998753 345799999997654332 2 23578889999999999998765
No 73
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.19 E-value=5.7e-11 Score=97.22 Aligned_cols=109 Identities=17% Similarity=0.095 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~~ 109 (249)
++.+|||+|||+|.++..++...+ ..+|+++|+++.. .+++++++++|+.+..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-------------EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---
Confidence 478999999999999999998763 4799999999732 2346889999998742
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcCCCeeE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVT 188 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~f~~v~ 188 (249)
..++||+|+++... + ....+..+.++|+|||.+++.. ......++..++. -|+.+.
T Consensus 129 ------~~~~~D~i~~~~~~--------~-------~~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~-g~~~~~ 184 (207)
T 1jsx_A 129 ------SEPPFDGVISRAFA--------S-------LNDMVSWCHHLPGEQGRFYALK-GQMPEDEIALLPE-EYQVES 184 (207)
T ss_dssp ------CCSCEEEEECSCSS--------S-------HHHHHHHHTTSEEEEEEEEEEE-SSCCHHHHHTSCT-TEEEEE
T ss_pred ------ccCCcCEEEEeccC--------C-------HHHHHHHHHHhcCCCcEEEEEe-CCCchHHHHHHhc-CCceee
Confidence 24689999986421 1 1256788899999999999843 3334444443333 354444
No 74
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.19 E-value=7e-11 Score=100.76 Aligned_cols=99 Identities=18% Similarity=0.231 Sum_probs=76.6
Q ss_pred cCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCC
Q 025715 36 FNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDIT 103 (249)
Q Consensus 36 ~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~ 103 (249)
..-+.++.+|||+|||+|.++..+++. + .++|+|+|+++.. .+ ++++++++|+.
T Consensus 41 l~~~~~~~~vLDiGcG~G~~~~~la~~-~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 106 (267)
T 3kkz_A 41 IDNLTEKSLIADIGCGTGGQTMVLAGH-V-------------TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD 106 (267)
T ss_dssp CCCCCTTCEEEEETCTTCHHHHHHHTT-C-------------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred cccCCCCCEEEEeCCCCCHHHHHHHhc-c-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh
Confidence 333468899999999999999999876 3 3699999999842 12 45899999998
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+.+ +..++||+|++....... +. ..++..+.++|||||.+++...
T Consensus 107 ~~~--------~~~~~fD~i~~~~~~~~~-----~~-------~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 107 DLP--------FRNEELDLIWSEGAIYNI-----GF-------ERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp SCC--------CCTTCEEEEEESSCGGGT-----CH-------HHHHHHHGGGEEEEEEEEEEEE
T ss_pred hCC--------CCCCCEEEEEEcCCceec-----CH-------HHHHHHHHHHcCCCCEEEEEEe
Confidence 753 345789999998765432 21 2468889999999999998764
No 75
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.18 E-value=4.6e-11 Score=102.20 Aligned_cols=109 Identities=18% Similarity=0.200 Sum_probs=81.7
Q ss_pred hhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCc
Q 025715 27 FKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGV 95 (249)
Q Consensus 27 ~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v 95 (249)
-.+.++......+.++.+|||+|||+|.++..+++..+ ..+|+++|+++.. ..+++
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 89 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNP-------------DAEITSIDISPESLEKARENTEKNGIKNV 89 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHTTCCSE
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCc
Confidence 34445544455567899999999999999999998753 5799999999732 23578
Q ss_pred eEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 96 IQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 96 ~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+++.+|+.+.+ +.+++||+|++....... .+. ..++..+.++|||||.+++..
T Consensus 90 ~~~~~d~~~~~--------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 90 KFLQANIFSLP--------FEDSSFDHIFVCFVLEHL----QSP-------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEEECCGGGCC--------SCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcccccCC--------CCCCCeeEEEEechhhhc----CCH-------HHHHHHHHHHcCCCcEEEEEE
Confidence 89999987643 345789999998754332 121 246788899999999999865
No 76
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.18 E-value=1.1e-10 Score=97.58 Aligned_cols=97 Identities=20% Similarity=0.247 Sum_probs=75.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CCCCceEeecCCCChhhHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~~~v~~~~gDi~~~~~~~~ 110 (249)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++.. ...+++++++|+.+.+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~---- 111 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-G--------------YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP---- 111 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS----
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC----
Confidence 357899999999999999999876 3 689999999732 2357889999998753
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+.+++||+|++....... .+. ..++..+.++|+|||.+++.++.
T Consensus 112 ----~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 112 ----FENEQFEAIMAINSLEWT----EEP-------LRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp ----SCTTCEEEEEEESCTTSS----SCH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCCCccEEEEcChHhhc----cCH-------HHHHHHHHHHhCCCeEEEEEEcC
Confidence 346799999997654432 122 24688889999999999997754
No 77
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.18 E-value=2.3e-10 Score=96.59 Aligned_cols=97 Identities=20% Similarity=0.203 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHH---hcCCCCCCCCCCCCCCCeEEEecCCCCCC------CCCceEeecCCCChhhHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRK---LYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~---~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~~~v~~~~gDi~~~~~~~~i 111 (249)
++.+|||+|||+|.++..+++. ++ +.++|+|+|+++... .++++++++|+.+....
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~------------~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l--- 145 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMG------------IDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTF--- 145 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTT------------CCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGG---
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcC------------CCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHH---
Confidence 4679999999999999999987 33 358999999998531 25789999999874210
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHH-hccCCCEEEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTH-VLKEGGKFIAKI 167 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~-~Lk~gG~lv~k~ 167 (249)
..+...+||+|++|+.. .+ ...++..+.+ +|||||.|++..
T Consensus 146 -~~~~~~~fD~I~~d~~~-------~~-------~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 146 -EHLREMAHPLIFIDNAH-------AN-------TFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp -GGGSSSCSSEEEEESSC-------SS-------HHHHHHHHHHHTCCTTCEEEECS
T ss_pred -HhhccCCCCEEEECCch-------Hh-------HHHHHHHHHHhhCCCCCEEEEEe
Confidence 11233479999998741 11 1246777886 999999999853
No 78
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.18 E-value=1.6e-10 Score=104.58 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=77.3
Q ss_pred cCCCeEEEEcCC------CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--CCCceEeecCCCChhhHHHH
Q 025715 40 EGVKRVVDLCAA------PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 40 ~~g~~vLDLG~g------pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~~~v~~~~gDi~~~~~~~~i 111 (249)
.++.+||||||| +|+++..+++... +.++|+|+|+++... .++++++++|+.+.+....+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f------------P~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFF------------PRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHC------------TTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhC------------CCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhh
Confidence 456899999999 7888887776653 358999999998653 36899999999997654444
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
... .++||+|++|+... ... ....+..+.++|||||.|++..+
T Consensus 283 ~~~--d~sFDlVisdgsH~------~~d------~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 283 ARR--YGPFDIVIDDGSHI------NAH------VRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp HHH--HCCEEEEEECSCCC------HHH------HHHHHHHHGGGEEEEEEEEEECG
T ss_pred hcc--cCCccEEEECCccc------chh------HHHHHHHHHHhcCCCeEEEEEec
Confidence 322 36899999987421 111 24578899999999999999743
No 79
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.18 E-value=1.2e-10 Score=97.25 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=73.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCC-CceEeecCCCChhhHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE-GVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~-~v~~~~gDi~~~~~~~~i~ 112 (249)
.++.+|||+|||+|.++..+++.. ..|+|+|+++.. ... +++++++|+.+.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~------- 98 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---------------NDITCVEASEEAISHAQGRLKDGITYIHSRFEDA------- 98 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---------------SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-------
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---------------CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-------
Confidence 367899999999999999888652 489999999742 122 788999998763
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHH-HhccCCCEEEEEEecCCC
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVT-HVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~-~~Lk~gG~lv~k~~~~~~ 172 (249)
+.+++||+|++....... .+. ..++..+. ++|||||.+++.+.....
T Consensus 99 --~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 99 --QLPRRYDNIVLTHVLEHI----DDP-------VALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp --CCSSCEEEEEEESCGGGC----SSH-------HHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred --CcCCcccEEEEhhHHHhh----cCH-------HHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 245789999997654332 122 25788889 999999999998765443
No 80
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.17 E-value=1.6e-10 Score=95.38 Aligned_cols=96 Identities=14% Similarity=0.136 Sum_probs=73.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CC-CCceEeecCCCChhhHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~-~~v~~~~gDi~~~~~~~~i~ 112 (249)
.++.+|||+|||+|.++..++++ + ..|+|+|+++.. .. .+++++++|+.+.+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~------ 102 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA-G--------------RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE------ 102 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT-T--------------CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC------
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC-C--------------CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC------
Confidence 47889999999999999999875 3 699999999832 12 37889999998754
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+. ++||+|++....... .... ...++..+.++|||||.+++...
T Consensus 103 --~~-~~fD~v~~~~~l~~~-----~~~~----~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 103 --VP-TSIDTIVSTYAFHHL-----TDDE----KNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp --CC-SCCSEEEEESCGGGS-----CHHH----HHHHHHHHHHHSCTTCEEEEEEE
T ss_pred --CC-CCeEEEEECcchhcC-----ChHH----HHHHHHHHHHhcCCCCEEEEEec
Confidence 23 789999998654322 2111 12467888999999999999764
No 81
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.17 E-value=5.1e-11 Score=98.90 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=75.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++..+ ...|+|+|+++.. .+++++++++|+.+..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~-- 101 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-------------DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT-- 101 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-------------TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH--
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-------------CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHH--
Confidence 4678999999999999999998763 5799999999732 2467899999997632
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHH-HHHHHHHHHHhccCCCEEEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
..+..++||.|+++.+..+.... .+. .++ ....+..+.++|||||.|++.+
T Consensus 102 ----~~~~~~~~d~v~~~~~~p~~~~~--~~~--~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 102 ----DVFEPGEVKRVYLNFSDPWPKKR--HEK--RRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ----HHCCTTSCCEEEEESCCCCCSGG--GGG--GSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ----hhcCcCCcCEEEEECCCCCcCcc--ccc--cccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 23566789999886532221100 000 001 2356888899999999999865
No 82
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=4.2e-10 Score=94.49 Aligned_cols=107 Identities=11% Similarity=0.058 Sum_probs=78.0
Q ss_pred cccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CCCCceEeecCCCChhhHH
Q 025715 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 38 ~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~~~v~~~~gDi~~~~~~~ 109 (249)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ...+++++++|+.+.+...
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~ 117 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---------------PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAA 117 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---------------SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---------------CCEEEEECCHHHHHHHHHhCcccCceEEECccccccccc
Confidence 35788999999999999999998864 389999999732 2247899999999876433
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~ 171 (249)
.+.. ...||+|+++........ .+ ....+..+.++|||||.+++..+...
T Consensus 118 ~~~~---~~~~d~v~~~~~~~~~~~--~~-------~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 118 QIHS---EIGDANIYMRTGFHHIPV--EK-------RELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHH---HHCSCEEEEESSSTTSCG--GG-------HHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred cccc---ccCccEEEEcchhhcCCH--HH-------HHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 2221 135999999875543211 11 13578888999999999888776543
No 83
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.16 E-value=2.4e-10 Score=95.94 Aligned_cols=120 Identities=11% Similarity=0.017 Sum_probs=84.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C--CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P--IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~--~~~v~~~~gDi~~~~~~~ 109 (249)
++.+|||+|||+|.++..+++... ..|+++|+++.. . ..++.++++|+.+..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--- 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--------------REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT--- 141 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--------------SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC---
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--------------CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC---
Confidence 588999999999999998876542 699999999732 0 124778889986643
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC--------------CHHH
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--------------DTSL 175 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~--------------~~~~ 175 (249)
+..++||+|+++...... ... ....++..+.++|+|||.+++...... ...+
T Consensus 142 -----~~~~~fD~v~~~~~l~~~-----~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 207 (241)
T 2ex4_A 142 -----PEPDSYDVIWIQWVIGHL-----TDQ----HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDV 207 (241)
T ss_dssp -----CCSSCEEEEEEESCGGGS-----CHH----HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHH
T ss_pred -----CCCCCEEEEEEcchhhhC-----CHH----HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHH
Confidence 244689999998654321 111 124578888999999999998654211 3556
Q ss_pred HHHHHhcC-CCeeEEec
Q 025715 176 LYCQLKLF-FPVVTFAK 191 (249)
Q Consensus 176 l~~~l~~~-f~~v~~~k 191 (249)
+..+++.. |+.+....
T Consensus 208 ~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 208 VRRIICSAGLSLLAEER 224 (241)
T ss_dssp HHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHcCCeEEEeee
Confidence 66666654 88777653
No 84
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.16 E-value=2.1e-10 Score=98.68 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=74.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------C-CCCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~-~~~v~~~~gDi~~~~ 106 (249)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++.. . .++++++.+|+.+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-- 125 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--------------VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-- 125 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG--
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh--
Confidence 36788999999999999999997765 599999999732 1 1468888999854
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
++ ++||+|++.......+.. + ....+..+.++|||||.+++..+..
T Consensus 126 --------~~-~~fD~v~~~~~l~~~~~~--~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 126 --------FD-EPVDRIVSIGAFEHFGHE--R-------YDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp --------CC-CCCSEEEEESCGGGTCTT--T-------HHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred --------CC-CCeeEEEEeCchhhcChH--H-------HHHHHHHHHHhcCCCCEEEEEEecC
Confidence 23 689999998755433211 1 1356888899999999999977643
No 85
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.15 E-value=1.7e-10 Score=98.39 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=75.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++..+ .+|+++|+++.. .+ .+++++.+|+.+.+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 124 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARD--------------VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP- 124 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC--------------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-
Confidence 6789999999999999999988654 799999999732 12 36889999998753
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+.+++||+|++........ +. ...+..+.++|||||.+++..+
T Consensus 125 -------~~~~~fD~v~~~~~l~~~~----~~-------~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 125 -------FEDASFDAVWALESLHHMP----DR-------GRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp -------SCTTCEEEEEEESCTTTSS----CH-------HHHHHHHHTTEEEEEEEEEEEE
T ss_pred -------CCCCCccEEEEechhhhCC----CH-------HHHHHHHHHHcCCCeEEEEEEe
Confidence 3457899999976554321 21 2568889999999999998765
No 86
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.15 E-value=1.2e-10 Score=96.76 Aligned_cols=118 Identities=16% Similarity=0.114 Sum_probs=77.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+ .+++++++|+.+...
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQ------------PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIP 124 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGG
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC------------CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHH
Confidence 4678999999999999999998764 35899999999832 12 258889999754210
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~ 183 (249)
.+...+..++||+|++|+.... ... ....+..+ ++|||||.+++.....+....+...++..
T Consensus 125 --~~~~~~~~~~fD~V~~d~~~~~-----~~~------~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 186 (221)
T 3u81_A 125 --QLKKKYDVDTLDMVFLDHWKDR-----YLP------DTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGS 186 (221)
T ss_dssp --GTTTTSCCCCCSEEEECSCGGG-----HHH------HHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHC
T ss_pred --HHHHhcCCCceEEEEEcCCccc-----chH------HHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhC
Confidence 0000111268999999864221 110 11334445 99999999998655444455666655543
No 87
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.14 E-value=9.6e-11 Score=100.82 Aligned_cols=114 Identities=11% Similarity=0.076 Sum_probs=81.7
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------CCCCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------~~~~v~~~~gDi~~~~ 106 (249)
+.++.+|||+|||+|.++..+++.++ +..+|+++|+++.. ..++++++++|+.+.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~- 174 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALN------------GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF- 174 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHT------------TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcC------------CCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc-
Confidence 36789999999999999999998754 35799999998732 125688899998762
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-CC
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FP 185 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f~ 185 (249)
+.+++||+|++|... . ..++..+.++|||||.+++.+........+...++.. |.
T Consensus 175 --------~~~~~fD~Vi~~~~~-------~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 175 --------ISDQMYDAVIADIPD-------P---------WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMH 230 (275)
T ss_dssp --------CCSCCEEEEEECCSC-------G---------GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEE
T ss_pred --------CcCCCccEEEEcCcC-------H---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 345689999997531 1 1357788999999999998664333334455545433 54
Q ss_pred eeEE
Q 025715 186 VVTF 189 (249)
Q Consensus 186 ~v~~ 189 (249)
.+..
T Consensus 231 ~~~~ 234 (275)
T 1yb2_A 231 HLET 234 (275)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 88
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.14 E-value=2.2e-11 Score=102.68 Aligned_cols=101 Identities=13% Similarity=0.015 Sum_probs=71.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CCCCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~~~v~~~~gDi~~~~~~~ 109 (249)
.+|.+|||+|||+|..+.++++..+ ..|++||+++.. .-.++.++.+|..+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--------------~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~---- 120 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--------------DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV---- 120 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--------------EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH----
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--------------cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh----
Confidence 6789999999999999988876543 589999999832 123466777876432
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+.+++||.|+.|..+......... ....++..+.++|||||.|++-
T Consensus 121 --~~~~~~~~FD~i~~D~~~~~~~~~~~~------~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 121 --APTLPDGHFDGILYDTYPLSEETWHTH------QFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp --GGGSCTTCEEEEEECCCCCBGGGTTTH------HHHHHHHTHHHHEEEEEEEEEC
T ss_pred --cccccccCCceEEEeeeecccchhhhc------chhhhhhhhhheeCCCCEEEEE
Confidence 223567889999999754332221111 1245788899999999999863
No 89
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.14 E-value=1.5e-10 Score=96.33 Aligned_cols=99 Identities=21% Similarity=0.187 Sum_probs=74.1
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~ 109 (249)
+.++.+|||+|||+|.++..+++..+ +.++|+|+|+++.. ..++++++++|+.+....
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 137 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVG------------WEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY- 137 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG-
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhC------------CCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchh-
Confidence 36788999999999999999998875 35799999999831 236889999999874311
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
..+ .++||+|++|... .+. ....+..+.++|||||.+++..
T Consensus 138 ---~~~-~~~~D~v~~~~~~-------~~~------~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 138 ---RAL-VPKVDVIFEDVAQ-------PTQ------AKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ---TTT-CCCEEEEEECCCS-------TTH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---hcc-cCCceEEEECCCC-------HhH------HHHHHHHHHHhcCCCCEEEEEE
Confidence 012 3589999998641 121 1234778899999999999863
No 90
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.14 E-value=5.6e-11 Score=97.87 Aligned_cols=97 Identities=12% Similarity=-0.063 Sum_probs=70.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------C---------------CCCce
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---------------IEGVI 96 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~---------------~~~v~ 96 (249)
.++.+|||+|||+|..+..++++ + ..|+|+|+++.. . ..+++
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g--------------~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G--------------YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C--------------CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C--------------CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 57789999999999999999876 4 699999999731 1 24789
Q ss_pred EeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 97 ~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
++++|+.+.+.. ..++||+|++.+++... ... .....+..+.++|||||.+++.+
T Consensus 86 ~~~~d~~~l~~~-------~~~~fD~v~~~~~l~~l-----~~~----~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 86 IWCGDFFALTAR-------DIGHCAAFYDRAAMIAL-----PAD----MRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp EEEECCSSSTHH-------HHHSEEEEEEESCGGGS-----CHH----HHHHHHHHHHHHSCSEEEEEEEE
T ss_pred EEECccccCCcc-------cCCCEEEEEECcchhhC-----CHH----HHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999886521 01579999987654321 111 12356788999999999944433
No 91
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.14 E-value=4.4e-10 Score=93.12 Aligned_cols=99 Identities=18% Similarity=0.142 Sum_probs=73.1
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-----CCceEeecCC
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-----EGVIQVQGDI 102 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-----~~v~~~~gDi 102 (249)
++++.+|||+|||+|.++..+++. + .+|+++|+++.. .+ .++.++.+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-G--------------YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA 92 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-C--------------CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc
Confidence 368899999999999999999876 3 699999998731 01 1467889998
Q ss_pred CChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+.+ +..++||+|++....... .+.. ....++..+.++|+|||.+++..+
T Consensus 93 ~~~~--------~~~~~~D~v~~~~~l~~~----~~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 93 SSLS--------FHDSSFDFAVMQAFLTSV----PDPK----ERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TSCC--------SCTTCEEEEEEESCGGGC----CCHH----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccC--------CCCCceeEEEEcchhhcC----CCHH----HHHHHHHHHHHHcCCCeEEEEEEC
Confidence 8753 345789999997644321 1221 123578888999999999998755
No 92
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.14 E-value=3.4e-10 Score=96.14 Aligned_cols=95 Identities=13% Similarity=0.181 Sum_probs=71.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+++. + ..|+|+|+++.. ..++++++++|+.+.+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 106 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-F--------------GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFS------- 106 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-S--------------SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCC-------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCC-------
Confidence 46789999999999999988765 2 589999999742 1458899999998753
Q ss_pred hcCCCcccEEEeCC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 114 HFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~~~~~~~DlVlsD~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+ +++||+|++.. ..... .. ......++..+.++|||||.|++.
T Consensus 107 -~-~~~fD~v~~~~~~l~~~-----~~---~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 -L-GRRFSAVTCMFSSIGHL-----AG---QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp -C-SCCEEEEEECTTGGGGS-----CH---HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred -c-cCCcCEEEEcCchhhhc-----CC---HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 47899999975 43321 11 112345788889999999999984
No 93
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.14 E-value=1.3e-10 Score=97.62 Aligned_cols=96 Identities=23% Similarity=0.280 Sum_probs=73.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
+++.+|||+|||+|.++..+++.. ..|+++|+++.. .+++++++++|+.+.+
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 82 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV---------------QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-- 82 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS---------------SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC--
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC---------------CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC--
Confidence 678999999999999999888653 589999999732 1357889999987643
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+.+++||+|++....... .+. ..++..+.++|||||.+++....
T Consensus 83 ------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 83 ------FPDDSFDIITCRYAAHHF----SDV-------RKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp ------SCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------CCCCcEEEEEECCchhhc----cCH-------HHHHHHHHHHcCCCcEEEEEEcC
Confidence 345789999998654321 121 25688889999999999986553
No 94
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.14 E-value=7.1e-11 Score=98.61 Aligned_cols=122 Identities=7% Similarity=-0.012 Sum_probs=80.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
+++.+|||+|||+|.++..+++..+ ...|+|+|+++.. .+.++.++++|+.+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p-------------~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~--- 96 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP-------------EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV--- 96 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT-------------TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH---
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC-------------CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH---
Confidence 4678999999999999999998764 5799999999732 246789999998652
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL 182 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~ 182 (249)
+...+.++++|.|+++.+..+........ .-.....+..+.++|||||.|++.+-...-...+...+..
T Consensus 97 --l~~~~~~~~~d~v~~~~~~p~~~~~~~~r---r~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 97 --LHKMIPDNSLRMVQLFFPDPWHKARHNKR---RIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp --HHHHSCTTCEEEEEEESCCCCCSGGGGGG---SSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred --HHHHcCCCChheEEEeCCCCccchhhhhh---hhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 12235678999999875432211100000 0001246788899999999999865322223344454544
No 95
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.14 E-value=3.1e-10 Score=99.92 Aligned_cols=123 Identities=13% Similarity=0.100 Sum_probs=87.8
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------C---CCCceEeecCCCChhhHHHH
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~---~~~v~~~~gDi~~~~~~~~i 111 (249)
.+|||||||.|+.+..++++.+ ..+|++||+++.. . .++++++.+|..+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-------------~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~------ 151 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-------------QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV------ 151 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-------------TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH------
T ss_pred CEEEEEECCcCHHHHHHHHHCC-------------CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH------
Confidence 3999999999999999998764 4699999999831 1 25788899987542
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC---HHHHHHHHhcCCCeeE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD---TSLLYCQLKLFFPVVT 188 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~---~~~l~~~l~~~f~~v~ 188 (249)
...+.+++||+|++|..... +.. .+. .....+..+.++|+|||.|++....... ...+...++..|..+.
T Consensus 152 l~~~~~~~fDvIi~D~~~~~-~~~--~~L----~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~ 224 (317)
T 3gjy_A 152 AESFTPASRDVIIRDVFAGA-ITP--QNF----TTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVA 224 (317)
T ss_dssp HHTCCTTCEEEEEECCSTTS-CCC--GGG----SBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEE
T ss_pred HhhccCCCCCEEEECCCCcc-ccc--hhh----hHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceE
Confidence 12234578999999974321 111 000 0134678889999999999998775443 3456777888899988
Q ss_pred Eec
Q 025715 189 FAK 191 (249)
Q Consensus 189 ~~k 191 (249)
++.
T Consensus 225 ~~~ 227 (317)
T 3gjy_A 225 VIA 227 (317)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 96
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=94.15 Aligned_cols=110 Identities=18% Similarity=0.230 Sum_probs=78.2
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~ 109 (249)
+.++.+|||+|||+|.++..+++... ..|+++|+++.. ..++++++++|+.+.+
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~--------------~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~--- 102 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGF--------------PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD--- 102 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTC--------------CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC---
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCC--------------CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC---
Confidence 36889999999999999999887632 389999999732 1257889999998743
Q ss_pred HHHHhcCCCcccEEEeCCCCCC-----CCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC
Q 025715 110 VVIRHFDGCKADLVVCDGAPDV-----TGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~-----~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~ 171 (249)
+.+++||+|++++.... ...+.... ........++..+.++|||||.+++..+...
T Consensus 103 -----~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 103 -----FPSASFDVVLEKGTLDALLAGERDPWTVSS-EGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp -----SCSSCEEEEEEESHHHHHTTTCSCTTSCCH-HHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred -----CCCCcccEEEECcchhhhcccccccccccc-chhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 34578999999764311 11122111 1122345678899999999999999776543
No 97
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=1.7e-10 Score=99.08 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=75.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+++ . ...|+|+|+++.. ..+++.+..+|+.+.+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 113 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--S-------------GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFR------- 113 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--T-------------TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-------
T ss_pred CCCCEEEEecCCCCHHHHHHHh--C-------------CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-------
Confidence 5778999999999999999987 2 3799999999742 1367889999998753
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~ 172 (249)
+ +++||+|++....... .+. ..++..+.++|||||.+++.+.....
T Consensus 114 -~-~~~fD~v~~~~~l~~~----~d~-------~~~l~~~~~~LkpgG~l~~~~~~~~~ 159 (279)
T 3ccf_A 114 -V-DKPLDAVFSNAMLHWV----KEP-------EAAIASIHQALKSGGRFVAEFGGKGN 159 (279)
T ss_dssp -C-SSCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEECTTT
T ss_pred -c-CCCcCEEEEcchhhhC----cCH-------HHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 2 3689999998755432 122 24678889999999999997765433
No 98
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.13 E-value=1.8e-10 Score=99.64 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=75.9
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~ 106 (249)
+.++.+|||+|||+|.++..+++..+ .+|+++|+++.. .+ ++++++.+|+.+.+
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFG--------------VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--------------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 46788999999999999999998764 699999999732 12 46889999998753
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+.+++||+|++........ +. ..++..+.++|||||.|++...
T Consensus 146 --------~~~~~fD~v~~~~~l~~~~----~~-------~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 --------CEDNSYDFIWSQDAFLHSP----DK-------LKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp --------SCTTCEEEEEEESCGGGCS----CH-------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------CCCCCEeEEEecchhhhcC----CH-------HHHHHHHHHHcCCCeEEEEEEe
Confidence 3557899999976543321 21 3578889999999999998765
No 99
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.13 E-value=1.6e-10 Score=100.34 Aligned_cols=102 Identities=16% Similarity=0.104 Sum_probs=75.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------CCCCceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------------~~~~v~~~~gDi~~~~ 106 (249)
.++.+|||+|||+|.++..+++.+. ...+|+|+|+++.. ..++++++++|+.+.+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELK------------PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSS------------CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC------------CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC
Confidence 5789999999999999999998763 25799999999832 1357899999998854
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
... ...+..++||+|++....... +. ...+..+.++|+|||.|++..
T Consensus 103 ~~~--~~~~~~~~fD~V~~~~~l~~~-----~~-------~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 103 FLG--ADSVDKQKIDMITAVECAHWF-----DF-------EKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp GGC--TTTTTSSCEEEEEEESCGGGS-----CH-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc--cccccCCCeeEEeHhhHHHHh-----CH-------HHHHHHHHHhcCCCcEEEEEe
Confidence 210 000112789999998754432 21 357888899999999999843
No 100
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.13 E-value=1.2e-10 Score=98.28 Aligned_cols=98 Identities=22% Similarity=0.273 Sum_probs=76.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..++++.+ ...|+++|+++.. ..++++++.+|+.+..
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-------------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 91 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-------------VNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK------- 91 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-------------TTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-------
Confidence 5778999999999999999998864 4799999999742 1467899999987642
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
.+++||+|++.....+. .+. ..++..+.++|+|||.+++.+...
T Consensus 92 --~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 92 --PAQKADLLYANAVFQWV----PDH-------LAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp --CSSCEEEEEEESCGGGS----TTH-------HHHHHHHGGGEEEEEEEEEEEECC
T ss_pred --ccCCcCEEEEeCchhhC----CCH-------HHHHHHHHHhcCCCeEEEEEeCCC
Confidence 24689999998754432 121 256888899999999999977643
No 101
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.13 E-value=1.3e-10 Score=100.02 Aligned_cols=102 Identities=16% Similarity=0.093 Sum_probs=74.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~ 106 (249)
+.++.+|||+|||+|.++..+++. + ...|+|+|+++.. .. .+++++++|+.+.+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 127 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-G-------------IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH 127 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-T-------------CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-C-------------CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc
Confidence 368899999999999999998765 3 3599999999732 11 35788999998753
Q ss_pred hHHHHHHhc-CCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 107 TAEVVIRHF-DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 107 ~~~~i~~~~-~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+ .+++||+|+++..+...- . . ......++..+.++|||||.+++.+..
T Consensus 128 --------~~~~~~fD~v~~~~~l~~~~-~--~----~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 128 --------MDLGKEFDVISSQFSFHYAF-S--T----SESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp --------CCCSSCEEEEEEESCGGGGG-S--S----HHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred --------cCCCCCcCEEEECchhhhhc-C--C----HHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 2 357899999986543210 0 1 112346788899999999999997654
No 102
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.12 E-value=8.8e-11 Score=99.22 Aligned_cols=113 Identities=18% Similarity=0.149 Sum_probs=82.0
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------CCCCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------~~~~v~~~~gDi~~~~ 106 (249)
+.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. ..+++++.++|+.+.+
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVG------------EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 36889999999999999999998865 35799999998732 1256888899987642
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-CC
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FP 185 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f~ 185 (249)
+.+++||+|++|+.. . ..++..+.++|+|||.+++.........++...++.. |.
T Consensus 162 --------~~~~~~D~v~~~~~~-------~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 162 --------LEEAAYDGVALDLME-------P---------WKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp --------CCTTCEEEEEEESSC-------G---------GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred --------CCCCCcCEEEECCcC-------H---------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 345689999997531 1 1357788999999999998664433445555555543 44
Q ss_pred ee
Q 025715 186 VV 187 (249)
Q Consensus 186 ~v 187 (249)
.+
T Consensus 218 ~~ 219 (258)
T 2pwy_A 218 LE 219 (258)
T ss_dssp EE
T ss_pred eE
Confidence 33
No 103
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.12 E-value=2.2e-10 Score=92.64 Aligned_cols=115 Identities=16% Similarity=0.097 Sum_probs=80.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~~ 109 (249)
++.+|||+|||+|.++..+++. + .+|+++|+++.. .+++++++++|+.+.+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--- 93 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN-G--------------YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT--- 93 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC---
T ss_pred CCCeEEEEcCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC---
Confidence 5679999999999999998875 3 699999999732 2347888999987643
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe-cC------------CCHHHH
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF-RG------------KDTSLL 176 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~-~~------------~~~~~l 176 (249)
+ .++||+|++........ .+. ....+..+.++|+|||.+++... .. ....++
T Consensus 94 -----~-~~~~D~v~~~~~l~~~~---~~~------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (199)
T 2xvm_A 94 -----F-DRQYDFILSTVVLMFLE---AKT------IPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGEL 158 (199)
T ss_dssp -----C-CCCEEEEEEESCGGGSC---GGG------HHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHH
T ss_pred -----C-CCCceEEEEcchhhhCC---HHH------HHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHH
Confidence 2 46899999987543321 111 23567888999999999887543 11 133456
Q ss_pred HHHHhcCCCeeEE
Q 025715 177 YCQLKLFFPVVTF 189 (249)
Q Consensus 177 ~~~l~~~f~~v~~ 189 (249)
...+.. |+.+..
T Consensus 159 ~~~~~~-f~~~~~ 170 (199)
T 2xvm_A 159 RRYYEG-WERVKY 170 (199)
T ss_dssp HHHTTT-SEEEEE
T ss_pred HHHhcC-CeEEEe
Confidence 666655 665554
No 104
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.12 E-value=2.8e-10 Score=101.49 Aligned_cols=106 Identities=15% Similarity=0.044 Sum_probs=79.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
+++.+|||+|||+|.++..++...+ +...|+|+|+++.. .++++++.++|+.+...
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~------------~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~- 268 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLG------------PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR- 268 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHC------------TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG-
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhC------------CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc-
Confidence 5788999999999999999998763 25799999999832 23468899999987542
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
....||+|++|++.. .+..+......++...+..+.++|+|||.+++.+.
T Consensus 269 -------~~~~~D~Ii~npPyg---~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 269 -------FFPEVDRILANPPHG---LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp -------TCCCCSEEEECCCSC---C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred -------ccCCCCEEEECCCCc---CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 235689999998643 22222233445667888999999999999998654
No 105
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.12 E-value=1.7e-10 Score=97.09 Aligned_cols=94 Identities=14% Similarity=0.105 Sum_probs=69.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..++...+ ..+|+|+|+++.. .+++++++++|+.+....
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 135 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-------------HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR 135 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc
Confidence 4678999999999999999987543 5799999999832 245788999987543200
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.. ..++||+|+++... + ....+..+.++|+|||.|++.
T Consensus 136 ----~~-~~~~fD~V~~~~~~--------~-------~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 136 ----KD-VRESYDIVTARAVA--------R-------LSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp ----TT-TTTCEEEEEEECCS--------C-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred ----cc-ccCCccEEEEeccC--------C-------HHHHHHHHHHhcCCCCEEEEE
Confidence 00 13689999997621 1 135678889999999999874
No 106
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.12 E-value=3.6e-10 Score=101.88 Aligned_cols=120 Identities=20% Similarity=0.136 Sum_probs=83.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC---CceEeecCCCCh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE---GVIQVQGDITNA 105 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~---~v~~~~gDi~~~ 105 (249)
.++.+|||+|||+|.++..++++.+ ..+|+++|+++.. .+. +++++.+|+.+.
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p-------------~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~ 287 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNP-------------QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 287 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCC-------------CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc
Confidence 3458999999999999999998753 5799999999843 111 467789998773
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcCCC
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFP 185 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~f~ 185 (249)
+..++||+|++|+++...... .+ ......+..+.++|||||.+++...+....... +++.|.
T Consensus 288 ---------~~~~~fD~Ii~nppfh~~~~~-~~-----~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~---l~~~fg 349 (375)
T 4dcm_A 288 ---------VEPFRFNAVLCNPPFHQQHAL-TD-----NVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIFG 349 (375)
T ss_dssp ---------CCTTCEEEEEECCCC--------C-----CHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHH---HHHHHS
T ss_pred ---------CCCCCeeEEEECCCcccCccc-CH-----HHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHH---HHHhcC
Confidence 345789999999865432111 11 112356888999999999999966555555444 344566
Q ss_pred eeEEe
Q 025715 186 VVTFA 190 (249)
Q Consensus 186 ~v~~~ 190 (249)
.+..+
T Consensus 350 ~~~~~ 354 (375)
T 4dcm_A 350 NCTTI 354 (375)
T ss_dssp CCEEE
T ss_pred CEEEE
Confidence 55554
No 107
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.12 E-value=3.2e-10 Score=96.60 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=73.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----CCCCceEeecCCCChhhHHHHHHh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----~~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
.++.+|||+|||+|.++..+++. ..+|+|+|+++.. ...+++++++|+.+.+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-------- 89 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ---------------GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-------- 89 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT---------------TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCC--------
T ss_pred CCCCEEEEEcCcccHHHHHHHhC---------------CCEEEEEeCCHHHHHHHHhccCCEEEECchhhCC--------
Confidence 57889999999999999999862 3799999999832 2238899999998753
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+.+++||+|++....... .+. ..++..+.++|| ||.+++..+.
T Consensus 90 ~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHF----SHL-------EKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp SCTTCBSEEEEESCGGGC----SSH-------HHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCCCEeEEEEcchHhhc----cCH-------HHHHHHHHHHhC-CcEEEEEEcC
Confidence 356799999998754322 121 257888999999 9988887664
No 108
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.11 E-value=1.4e-10 Score=100.13 Aligned_cols=98 Identities=21% Similarity=0.175 Sum_probs=74.9
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CC-CCceEeecCCCChhhH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI-EGVIQVQGDITNARTA 108 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~-~~v~~~~gDi~~~~~~ 108 (249)
+.++.+|||+|||+|.++..+++..+ ...+|+|+|+++.. .. .+++++++|+.+.+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-- 85 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLP------------EGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-- 85 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSC------------TTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC--
Confidence 35788999999999999999988764 24799999999842 11 27889999998753
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+ +++||+|++....... .+. ..++..+.++|||||.+++...
T Consensus 86 ------~-~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 86 ------L-NDKYDIAICHAFLLHM----TTP-------ETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp ------C-SSCEEEEEEESCGGGC----SSH-------HHHHHHHHHTEEEEEEEEEEEC
T ss_pred ------c-CCCeeEEEECChhhcC----CCH-------HHHHHHHHHHcCCCCEEEEEec
Confidence 2 3689999998754332 121 2578889999999999997653
No 109
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.11 E-value=1.1e-09 Score=92.12 Aligned_cols=121 Identities=16% Similarity=0.068 Sum_probs=85.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++..++++.. ..|+++|+++.. ...+++++++|+.+.+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 153 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY--------------ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT---- 153 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC--------------SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC----
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc--------------CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC----
Confidence 4678999999999999999887753 589999998732 1246888899987643
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC---------------CCHHH
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---------------KDTSL 175 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~---------------~~~~~ 175 (249)
+..++||+|++...... .... -...++..+.++|||||.+++..... ....+
T Consensus 154 ----~~~~~fD~v~~~~~l~~-----~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
T 1xtp_A 154 ----LPPNTYDLIVIQWTAIY-----LTDA----DFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIH 220 (254)
T ss_dssp ----CCSSCEEEEEEESCGGG-----SCHH----HHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHH
T ss_pred ----CCCCCeEEEEEcchhhh-----CCHH----HHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHH
Confidence 34578999999764322 1111 12457888899999999999976411 12355
Q ss_pred HHHHHhcC-CCeeEEec
Q 025715 176 LYCQLKLF-FPVVTFAK 191 (249)
Q Consensus 176 l~~~l~~~-f~~v~~~k 191 (249)
+..+++.. |+.+....
T Consensus 221 ~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 221 YKRLFNESGVRVVKEAF 237 (254)
T ss_dssp HHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHCCCEEEEeee
Confidence 66666543 88777643
No 110
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.11 E-value=1.9e-10 Score=98.66 Aligned_cols=115 Identities=16% Similarity=0.137 Sum_probs=83.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------C--CCCceEeecCCCC
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------P--IEGVIQVQGDITN 104 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------~--~~~v~~~~gDi~~ 104 (249)
+.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. . .++++++++|+.+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVG------------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 36889999999999999999998765 35799999998732 1 3468888999876
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc--
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL-- 182 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~-- 182 (249)
.. +.+++||+|++|+... ...+..+.++|+|||.+++.+........+...++.
T Consensus 165 ~~--------~~~~~~D~v~~~~~~~----------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~ 220 (280)
T 1i9g_A 165 SE--------LPDGSVDRAVLDMLAP----------------WEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQ 220 (280)
T ss_dssp CC--------CCTTCEEEEEEESSCG----------------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHS
T ss_pred cC--------CCCCceeEEEECCcCH----------------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 42 3456899999976311 135778899999999999976544444455555553
Q ss_pred CCCeeEE
Q 025715 183 FFPVVTF 189 (249)
Q Consensus 183 ~f~~v~~ 189 (249)
.|..+..
T Consensus 221 ~f~~~~~ 227 (280)
T 1i9g_A 221 CWTEPRA 227 (280)
T ss_dssp SBCCCEE
T ss_pred CcCCcEE
Confidence 3554444
No 111
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.10 E-value=3.5e-10 Score=94.64 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=72.3
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~ 109 (249)
++++.+|||+|||+|.++..+++..+ .++|+|+|+++.. ..+++.++.+|+.++...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~- 137 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-------------KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY- 137 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-------------TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-------------CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccc-
Confidence 36789999999999999999998864 4799999999731 236788999999874210
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
..+. .+||+|+++... .+. ...++..+.++|||||.+++.
T Consensus 138 ---~~~~-~~~D~v~~~~~~-------~~~------~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 138 ---ANIV-EKVDVIYEDVAQ-------PNQ------AEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ---TTTS-CCEEEEEECCCS-------TTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cccC-ccEEEEEEecCC-------hhH------HHHHHHHHHHhCCCCcEEEEE
Confidence 0123 689999977421 111 134578889999999999986
No 112
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.10 E-value=2.4e-10 Score=96.87 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=71.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------C-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------I-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++... + .+++++.+|..+.
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-- 124 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALP------------DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT-- 124 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSC------------TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4678999999999999999998775 358999999998431 2 3688999997542
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+...-..++||+|++|+... + ....+..+.++|+|||.+++-
T Consensus 125 l~~~~~~~~~~~fD~V~~d~~~~-------~-------~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 125 LHSLLNEGGEHQFDFIFIDADKT-------N-------YLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHHHHHHHCSSCEEEEEEESCGG-------G-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHhhccCCCCEeEEEEcCChH-------H-------hHHHHHHHHHhcCCCeEEEEE
Confidence 11111111236899999986411 1 123577889999999999984
No 113
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.10 E-value=7.7e-11 Score=98.61 Aligned_cols=93 Identities=16% Similarity=0.169 Sum_probs=69.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC--CCceEeecCCCChhhH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNARTA 108 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~--~~v~~~~gDi~~~~~~ 108 (249)
+.+|||+|||+|..+..+++.++ +.++|+++|+++.. .+ ++++++++|..+.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~--- 121 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLA------------DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV--- 121 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSC------------TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH---
T ss_pred CCCEEEEcCCchHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH---
Confidence 44999999999999999998875 46899999999832 12 3688889987542
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+.+++||+|++|+... + ....+..+.++|||||.+++-
T Consensus 122 ---l~~~~~~~fD~V~~d~~~~-------~-------~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 122 ---MSRLANDSYQLVFGQVSPM-------D-------LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ---GGGSCTTCEEEEEECCCTT-------T-------HHHHHHHHHHHEEEEEEEEET
T ss_pred ---HHHhcCCCcCeEEEcCcHH-------H-------HHHHHHHHHHHcCCCcEEEEe
Confidence 1223357899999986421 1 123577888999999999973
No 114
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.10 E-value=3.6e-10 Score=97.24 Aligned_cols=97 Identities=14% Similarity=0.198 Sum_probs=74.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++. + ..|+|+|+++.. .+ ++++++++|+.+...
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 131 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-G--------------HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS 131 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-C--------------CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh
Confidence 34679999999999999999876 3 699999999732 12 568899999987541
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+.+++||+|++....... .+. ..++..+.++|||||.+++..+.
T Consensus 132 -------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 132 -------HLETPVDLILFHAVLEWV----ADP-------RSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp -------GCSSCEEEEEEESCGGGC----SCH-------HHHHHHHHHTEEEEEEEEEEEEB
T ss_pred -------hcCCCceEEEECchhhcc----cCH-------HHHHHHHHHHcCCCeEEEEEEeC
Confidence 345799999998755432 121 25788899999999999997653
No 115
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.09 E-value=3.7e-10 Score=94.31 Aligned_cols=137 Identities=16% Similarity=0.059 Sum_probs=91.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C---CCCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P---IEGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~---~~~v~~~~gDi~~~~~~ 108 (249)
++.+|||+|||+|.++..+++. ...|+|+|+++.. . ..+++++++|+.+..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 128 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---------------ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-- 128 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---------------TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---------------CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--
Confidence 3459999999999999888652 3689999999732 1 135889999998753
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC----------CCHHHHHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG----------KDTSLLYC 178 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~----------~~~~~l~~ 178 (249)
...+||+|++...+..... .+ ....+..+.++|||||.|++..+.. ....++..
T Consensus 129 -------~~~~fD~v~~~~~l~~~~~--~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (235)
T 3lcc_A 129 -------PTELFDLIFDYVFFCAIEP--EM-------RPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEE 192 (235)
T ss_dssp -------CSSCEEEEEEESSTTTSCG--GG-------HHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHH
T ss_pred -------CCCCeeEEEEChhhhcCCH--HH-------HHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHH
Confidence 3468999999765443210 01 2356888899999999999876632 13456777
Q ss_pred HHhcC-CCeeEEecCCC--CCCCCceEEEEEeecc
Q 025715 179 QLKLF-FPVVTFAKPKS--SRNSSIEAFAVCENYF 210 (249)
Q Consensus 179 ~l~~~-f~~v~~~kP~~--sr~~s~E~y~v~~g~~ 210 (249)
.+... |+.+.+..-.. ......|.+...++..
T Consensus 193 ~l~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~~~ 227 (235)
T 3lcc_A 193 VLVPIGFKAVSVEENPHAIPTRKGKEKLGRWKKIN 227 (235)
T ss_dssp HHGGGTEEEEEEEECTTCCTTTTTSCEEEEEEESC
T ss_pred HHHHcCCeEEEEEecCCccccccCHHHHhhhhhcc
Confidence 77765 77666542211 1123356666666544
No 116
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.09 E-value=5.7e-10 Score=97.53 Aligned_cols=99 Identities=8% Similarity=0.006 Sum_probs=75.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++..+ .+|+++|+++.. .+ ++++++.+|+.+.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 152 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD--------------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-- 152 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC--
Confidence 6788999999999999999998764 699999999732 12 3588889998652
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~ 172 (249)
+ ++||+|++.......+. .+ ....+..+.++|||||.+++..+....
T Consensus 153 --------~-~~fD~v~~~~~l~~~~~--~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 153 --------A-EPVDRIVSIEAFEHFGH--EN-------YDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp --------C-CCCSEEEEESCGGGTCG--GG-------HHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred --------C-CCcCEEEEeChHHhcCH--HH-------HHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 3 68999999875543321 11 235688889999999999998775544
No 117
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.09 E-value=5.5e-10 Score=91.43 Aligned_cols=94 Identities=26% Similarity=0.326 Sum_probs=71.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
+++ +|||+|||+|.++..++++ + ..+|+++|+++.. .+ ++++++++|+.+.+
T Consensus 43 ~~~-~vLdiG~G~G~~~~~l~~~-~-------------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 106 (219)
T 3dlc_A 43 TAG-TCIDIGSGPGALSIALAKQ-S-------------DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP- 106 (219)
T ss_dssp CEE-EEEEETCTTSHHHHHHHHH-S-------------EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-
T ss_pred CCC-EEEEECCCCCHHHHHHHHc-C-------------CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-
Confidence 444 9999999999999999987 3 3699999998732 12 36889999998753
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+.+++||+|+++...... .+. ...+..+.++|+|||.+++..
T Consensus 107 -------~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 107 -------IEDNYADLIVSRGSVFFW----EDV-------ATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp -------SCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred -------CCcccccEEEECchHhhc----cCH-------HHHHHHHHHhCCCCCEEEEEe
Confidence 355789999998754332 121 247888899999999999864
No 118
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.09 E-value=1.8e-10 Score=99.03 Aligned_cols=114 Identities=19% Similarity=0.199 Sum_probs=81.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+ ++++++.+|+.+.
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 176 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVG------------SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-- 176 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTT------------TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--
Confidence 6788999999999999999998864 35799999998732 12 4678888988653
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-CCe
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPV 186 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f~~ 186 (249)
+..++||+|++|+... ...+..+.++|+|||.+++..........+...++.. |..
T Consensus 177 -------~~~~~~D~V~~~~~~~----------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 177 -------FDEKDVDALFLDVPDP----------------WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp -------CSCCSEEEEEECCSCG----------------GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred -------ccCCccCEEEECCcCH----------------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 3446899999986311 1356778899999999998664333344555555432 555
Q ss_pred eEEe
Q 025715 187 VTFA 190 (249)
Q Consensus 187 v~~~ 190 (249)
+...
T Consensus 234 ~~~~ 237 (277)
T 1o54_A 234 IEVW 237 (277)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5443
No 119
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.09 E-value=4.9e-10 Score=97.20 Aligned_cols=135 Identities=13% Similarity=0.123 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~~~ 108 (249)
++.+|||+|||+|.++..+++. + ..+|+|+|+++.+ .+. +++++++|+.+..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~-------------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-- 186 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S-------------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-- 186 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S-------------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc--
Confidence 5679999999999999999987 5 4799999999742 133 3899999998631
Q ss_pred HHHHHhcCCCcc---cEEEeCCCCCCCCC---CC--cCHHHHHH---HHHHHHHHHH-HhccCCCEEEEEEecCCCHHHH
Q 025715 109 EVVIRHFDGCKA---DLVVCDGAPDVTGL---HD--MDEFVQSQ---LILAGLTVVT-HVLKEGGKFIAKIFRGKDTSLL 176 (249)
Q Consensus 109 ~~i~~~~~~~~~---DlVlsD~~~~~~g~---~~--~~~~~~~~---l~~~~l~~a~-~~Lk~gG~lv~k~~~~~~~~~l 176 (249)
. ++| |+|+||++....+. .+ .+...... --...+..+. +.|+|||.|++.+ .......+
T Consensus 187 -------~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~-~~~q~~~v 257 (284)
T 1nv8_A 187 -------K-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI-GEDQVEEL 257 (284)
T ss_dssp -------G-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC-CTTCHHHH
T ss_pred -------c-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE-CchHHHHH
Confidence 2 367 99999964322111 00 11100000 0014566777 8999999999843 33344444
Q ss_pred HHHHhcCCCeeEEecCCCCCCCCceEEEEEee
Q 025715 177 YCQLKLFFPVVTFAKPKSSRNSSIEAFAVCEN 208 (249)
Q Consensus 177 ~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g 208 (249)
..+++. ..++++.+.+ ++++++..
T Consensus 258 ~~~~~~----~~~~~D~~g~----~R~~~~~~ 281 (284)
T 1nv8_A 258 KKIVSD----TVFLKDSAGK----YRFLLLNR 281 (284)
T ss_dssp TTTSTT----CEEEECTTSS----EEEEEEEC
T ss_pred HHHHHh----CCeecccCCC----ceEEEEEE
Confidence 443333 2666776655 46666543
No 120
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.08 E-value=2.1e-10 Score=101.50 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=76.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C-------------CCCce
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-------------IEGVI 96 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~-------------~~~v~ 96 (249)
+.+|.+|||+|||+|.++..+++..+ +.++|+++|+++.. . ..+++
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVG------------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhC------------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 36889999999999999999998865 35899999998731 0 24788
Q ss_pred EeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHH
Q 025715 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (249)
Q Consensus 97 ~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l 176 (249)
++.+|+.+... .+.+++||+|++|+.... ..+..+.++|+|||.|++..........+
T Consensus 171 ~~~~d~~~~~~------~~~~~~fD~V~~~~~~~~----------------~~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 228 (336)
T 2b25_A 171 FIHKDISGATE------DIKSLTFDAVALDMLNPH----------------VTLPVFYPHLKHGGVCAVYVVNITQVIEL 228 (336)
T ss_dssp EEESCTTCCC-------------EEEEEECSSSTT----------------TTHHHHGGGEEEEEEEEEEESSHHHHHHH
T ss_pred EEECChHHccc------ccCCCCeeEEEECCCCHH----------------HHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Confidence 99999987420 123457999999864221 14677899999999999865543344445
Q ss_pred HHHHh
Q 025715 177 YCQLK 181 (249)
Q Consensus 177 ~~~l~ 181 (249)
+..++
T Consensus 229 ~~~l~ 233 (336)
T 2b25_A 229 LDGIR 233 (336)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 121
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.07 E-value=4.5e-10 Score=88.97 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=83.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+++.. .+|+++|+++.. ..++++++++| .
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~-------- 69 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA---------------TKLYCIDINVIALKEVKEKFDSVITLSDP---K-------- 69 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE---------------EEEEEECSCHHHHHHHHHHCTTSEEESSG---G--------
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc---------------CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---C--------
Confidence 578899999999999999998764 389999999742 14678888888 1
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC------------CHHHHHHHHh
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK------------DTSLLYCQLK 181 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~------------~~~~l~~~l~ 181 (249)
.+..++||+|++....... .+. ...+..+.++|||||.+++..+... ...++...++
T Consensus 70 ~~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 138 (170)
T 3i9f_A 70 EIPDNSVDFILFANSFHDM----DDK-------QHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS 138 (170)
T ss_dssp GSCTTCEEEEEEESCSTTC----SCH-------HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT
T ss_pred CCCCCceEEEEEccchhcc----cCH-------HHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh
Confidence 1356789999998654432 121 2567888999999999999876322 2446666666
Q ss_pred cCCCeeEEec
Q 025715 182 LFFPVVTFAK 191 (249)
Q Consensus 182 ~~f~~v~~~k 191 (249)
-|+.+....
T Consensus 139 -Gf~~~~~~~ 147 (170)
T 3i9f_A 139 -NFVVEKRFN 147 (170)
T ss_dssp -TEEEEEEEC
T ss_pred -CcEEEEccC
Confidence 677666643
No 122
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.07 E-value=1.1e-10 Score=96.04 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=67.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC--CCceEeecCCCChhh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNART 107 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~--~~v~~~~gDi~~~~~ 107 (249)
++.+|||+|||+|.++..++.+. ...|+|+|+++.. .+ ++++++++|+.+..
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~- 117 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--------------AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL- 117 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--------------CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT-
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--------------CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH-
Confidence 67899999999999999877653 2689999999732 23 57888999875421
Q ss_pred HHHHHHhcCCCc-ccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHH--HHhccCCCEEEEEEec
Q 025715 108 AEVVIRHFDGCK-ADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFR 169 (249)
Q Consensus 108 ~~~i~~~~~~~~-~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a--~~~Lk~gG~lv~k~~~ 169 (249)
..+.+++ ||+|++|+++. . .. ....+..+ .++|+|||.+++....
T Consensus 118 -----~~~~~~~~fD~I~~~~~~~-~-----~~------~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 118 -----KQPQNQPHFDVVFLDPPFH-F-----NL------AEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp -----TSCCSSCCEEEEEECCCSS-S-----CH------HHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred -----HhhccCCCCCEEEECCCCC-C-----cc------HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1122468 99999997632 1 11 11233444 6789999999986553
No 123
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.07 E-value=6.2e-10 Score=100.55 Aligned_cols=118 Identities=19% Similarity=0.158 Sum_probs=84.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
++.+|||+|||+|.++..++++ + .+|+++|+++... -..++++.+|+.+..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-g--------------~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~---- 293 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-G--------------AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL---- 293 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-T--------------CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS----
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc----
Confidence 6789999999999999999875 3 5999999998431 114788999998753
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcCCCeeEEe
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFA 190 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~f~~v~~~ 190 (249)
...++||+|++|+++...+.... ......+..+.++|+|||.+++...........+ ...|..+...
T Consensus 294 ----~~~~~fD~Ii~npp~~~~~~~~~------~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l---~~~f~~v~~l 360 (381)
T 3dmg_A 294 ----TEEARFDIIVTNPPFHVGGAVIL------DVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLL---EEKFGAFQTL 360 (381)
T ss_dssp ----CTTCCEEEEEECCCCCTTCSSCC------HHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHH---HHHHSCCEEE
T ss_pred ----ccCCCeEEEEECCchhhcccccH------HHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHH---HHhhccEEEE
Confidence 12368999999987654322111 1234578889999999999999765555554443 3446666654
No 124
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.07 E-value=9.4e-11 Score=98.34 Aligned_cols=102 Identities=13% Similarity=0.023 Sum_probs=70.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CCCCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~~~v~~~~gDi~~~~~~~ 109 (249)
.++.+|||+|||+|.++..+++... ..|+++|+++.. .-.++.++++|+.+.
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~---- 120 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--------------DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV---- 120 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE--------------EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH----
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC--------------CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh----
Confidence 5788999999999999999865422 489999999832 014578888987653
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
...+.+++||+|++|...... .... ......++..+.++|||||.|++..
T Consensus 121 --~~~~~~~~fD~V~~d~~~~~~--~~~~----~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 121 --APTLPDGHFDGILYDTYPLSE--ETWH----THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp --GGGSCTTCEEEEEECCCCCBG--GGTT----THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred --hcccCCCceEEEEECCcccch--hhhh----hhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 112556799999996321111 1111 1122356888999999999999743
No 125
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.07 E-value=5.5e-10 Score=91.95 Aligned_cols=108 Identities=15% Similarity=0.117 Sum_probs=80.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCc
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~ 119 (249)
.++.+|||+|||+|.++..+ + ..|+++|+++. +++++++|+.+.+ +.+++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l----~--------------~~v~~~D~s~~----~~~~~~~d~~~~~--------~~~~~ 115 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI----R--------------NPVHCFDLASL----DPRVTVCDMAQVP--------LEDES 115 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC----C--------------SCEEEEESSCS----STTEEESCTTSCS--------CCTTC
T ss_pred CCCCeEEEECCcCCHHHHHh----h--------------ccEEEEeCCCC----CceEEEeccccCC--------CCCCC
Confidence 57789999999999988665 2 48999999986 6678899987743 34578
Q ss_pred ccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC--CCHHHHHHHHhcC-CCeeEE
Q 025715 120 ADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--KDTSLLYCQLKLF-FPVVTF 189 (249)
Q Consensus 120 ~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~--~~~~~l~~~l~~~-f~~v~~ 189 (249)
||+|++...... .+. ..++..+.++|+|||.+++..+.. ....++...++.. |+.+..
T Consensus 116 fD~v~~~~~l~~-----~~~-------~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 116 VDVAVFCLSLMG-----TNI-------RDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp EEEEEEESCCCS-----SCH-------HHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred EeEEEEehhccc-----cCH-------HHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 999999765431 222 246788899999999999976643 3556677766654 766554
No 126
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.07 E-value=7.4e-10 Score=93.52 Aligned_cols=95 Identities=18% Similarity=0.074 Sum_probs=73.2
Q ss_pred cccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CCCCceEeecCCCChhh
Q 025715 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNART 107 (249)
Q Consensus 38 ~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~~~v~~~~gDi~~~~~ 107 (249)
.+.++.+|||+|||+|.++..+++. + .+|+|+|+++.. ..+++++.++|+.+.+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~- 99 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-G--------------YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP- 99 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-T--------------CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-C--------------CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-
Confidence 3467899999999999999998865 3 689999999732 1357889999997643
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+.+++||+|++........ +. ..++..+.++|||||.+++.
T Consensus 100 -------~~~~~fD~v~~~~~l~~~~----~~-------~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 -------LPDESVHGVIVVHLWHLVP----DW-------PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -------SCTTCEEEEEEESCGGGCT----TH-------HHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCCCeeEEEECCchhhcC----CH-------HHHHHHHHHHCCCCcEEEEE
Confidence 3457899999976543321 21 25678889999999999986
No 127
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.07 E-value=7e-10 Score=91.50 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=71.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-----CCceEeecCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-----EGVIQVQGDIT 103 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-----~~v~~~~gDi~ 103 (249)
.++.+|||+|||+|.++..++++.+ ...|+|+|+++.. .+ .+++++++|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF-------------FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT-------------CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC-------------CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4678999999999999999987643 4699999999732 11 16889999986
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
..+ ...++||+|++....... +.. ....++..+.++|||||.+++..
T Consensus 95 ~~~--------~~~~~fD~v~~~~~l~~~-----~~~----~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 95 YQD--------KRFHGYDAATVIEVIEHL-----DLS----RLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp SCC--------GGGCSCSEEEEESCGGGC-----CHH----HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccc--------ccCCCcCEEeeHHHHHcC-----CHH----HHHHHHHHHHHHcCCCEEEEEcc
Confidence 543 123689999997654322 211 12357888899999999777644
No 128
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.07 E-value=4.6e-10 Score=97.23 Aligned_cols=92 Identities=15% Similarity=0.088 Sum_probs=71.2
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~ 106 (249)
+++|.+|||+|||+|.|+..++++. ..+|+|+|++|.+ .+ ..++++++|..+..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g--------------~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~ 188 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--------------KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT--------------CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc--------------CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc
Confidence 4789999999999999999998763 3689999999843 13 34788999987742
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
..+.||.|+.|..+... ..+..|.++||+||.+.+-.+
T Consensus 189 ---------~~~~~D~Vi~~~p~~~~---------------~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 189 ---------GENIADRILMGYVVRTH---------------EFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp ---------CCSCEEEEEECCCSSGG---------------GGHHHHHHHEEEEEEEEEEEE
T ss_pred ---------cccCCCEEEECCCCcHH---------------HHHHHHHHHcCCCCEEEEEee
Confidence 35789999998754321 245667899999999987655
No 129
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.07 E-value=6.6e-10 Score=96.45 Aligned_cols=104 Identities=16% Similarity=0.226 Sum_probs=74.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C--------------------
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-------------------- 91 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~-------------------- 91 (249)
++.+|||+|||+|.++..++.+++ ...|+|+|+++.. .
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-------------~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-------------PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAE 112 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-------------CSEEEEEESCHHHHHHHHHTC----------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccc
Confidence 578999999999999999999874 4799999998721 0
Q ss_pred ---------------------------------------C-CCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCC
Q 025715 92 ---------------------------------------I-EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDV 131 (249)
Q Consensus 92 ---------------------------------------~-~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~ 131 (249)
. .++++.++|+.+... .+. .+..++||+|+|.....+
T Consensus 113 ~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~--~~~-~~~~~~fD~I~~~~vl~~ 189 (292)
T 3g07_A 113 GEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRD--DLV-EAQTPEYDVVLCLSLTKW 189 (292)
T ss_dssp -----------------------------CCSSTTCCSSTTTTEEEEECCCCCSSH--HHH-TTCCCCEEEEEEESCHHH
T ss_pred cccccccccccccccchhhhccCccccccccccccccccccccceEEecccccCcc--ccc-cccCCCcCEEEEChHHHH
Confidence 0 378999999986431 111 134579999999653211
Q ss_pred CCCCCcCHHH-HHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 132 TGLHDMDEFV-QSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 132 ~g~~~~~~~~-~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
. +.. .......++..+.++|+|||.|++.
T Consensus 190 i------hl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 190 V------HLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp H------HHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred h------hhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 0 000 1123456889999999999999985
No 130
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.06 E-value=1.7e-10 Score=97.42 Aligned_cols=121 Identities=10% Similarity=0.016 Sum_probs=78.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------------CCCCceEeecCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------------PIEGVIQVQGDI 102 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------------~~~~v~~~~gDi 102 (249)
.++.+|||+|||+|.++..+++..+ ...|+|+|+++.. ...+++++++|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~ 111 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP-------------DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNA 111 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST-------------TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC-------------CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcH
Confidence 5678999999999999999988753 5799999998621 246789999999
Q ss_pred CChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHH-HHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHh
Q 025715 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQ-LILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLK 181 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~-l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~ 181 (249)
.+. +...+..+++|.|++..+..+.-. .+.. .+ .....+..+.++|||||.|++.+....-...+...+.
T Consensus 112 ~~~-----l~~~~~~~~~D~v~~~~~dp~~k~---~h~k-rr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~ 182 (235)
T 3ckk_A 112 MKH-----LPNFFYKGQLTKMFFLFPDPHFKR---TKHK-WRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFE 182 (235)
T ss_dssp TTC-----HHHHCCTTCEEEEEEESCC---------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred HHh-----hhhhCCCcCeeEEEEeCCCchhhh---hhhh-hhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 862 112356689999987643221100 0000 00 1135788889999999999986533222233444444
Q ss_pred c
Q 025715 182 L 182 (249)
Q Consensus 182 ~ 182 (249)
.
T Consensus 183 ~ 183 (235)
T 3ckk_A 183 E 183 (235)
T ss_dssp T
T ss_pred H
Confidence 4
No 131
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.06 E-value=3.1e-10 Score=90.90 Aligned_cols=112 Identities=22% Similarity=0.280 Sum_probs=80.8
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~ 106 (249)
+.++.+|||+|||+|.++..+++.. .+|+++|+++.. .. +++++.++|+.+.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 94 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---------------RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA- 94 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---------------SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---------------CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-
Confidence 3678899999999999999888653 599999998732 12 4678888887541
Q ss_pred hHHHHHHhcCC-CcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-C
Q 025715 107 TAEVVIRHFDG-CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-F 184 (249)
Q Consensus 107 ~~~~i~~~~~~-~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f 184 (249)
+.. .+||+|++++... + ....+..+.++|+|||.+++..........+...++.. |
T Consensus 95 --------~~~~~~~D~v~~~~~~~-------~-------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 95 --------LCKIPDIDIAVVGGSGG-------E-------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp --------HTTSCCEEEEEESCCTT-------C-------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred --------cccCCCCCEEEECCchH-------H-------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 122 5899999986431 1 13567888999999999999776655556666666654 5
Q ss_pred CeeEE
Q 025715 185 PVVTF 189 (249)
Q Consensus 185 ~~v~~ 189 (249)
.+..
T Consensus 153 -~~~~ 156 (192)
T 1l3i_A 153 -DVNI 156 (192)
T ss_dssp -CCEE
T ss_pred -ceEE
Confidence 4443
No 132
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.06 E-value=6.3e-10 Score=97.86 Aligned_cols=158 Identities=16% Similarity=0.124 Sum_probs=99.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C-------CCCceEeecCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-------IEGVIQVQGDIT 103 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~-------~~~v~~~~gDi~ 103 (249)
.++.+|||+|||+|+++..++++.+ ..+|++||+++.. . .++++++.+|+.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~ 142 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-------------VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDAR 142 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-------------CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-------------CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHH
Confidence 3568999999999999999887542 4699999999731 1 246888889875
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHH-HHHHHHHHHHhccCCCEEEEEEecC-----CCHHHHH
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRG-----KDTSLLY 177 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~Lk~gG~lv~k~~~~-----~~~~~l~ 177 (249)
+. +. . ..++||+|++|..... +..... ..+ ....+..+.++|+|||.|++..... .....+.
T Consensus 143 ~~-----l~-~-~~~~fD~Ii~d~~~~~-~~~~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~ 210 (314)
T 1uir_A 143 AY-----LE-R-TEERYDVVIIDLTDPV-GEDNPA----RLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVH 210 (314)
T ss_dssp HH-----HH-H-CCCCEEEEEEECCCCB-STTCGG----GGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHH
T ss_pred HH-----HH-h-cCCCccEEEECCCCcc-cccCcc----hhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHH
Confidence 42 11 1 3468999999975322 000000 011 1356888899999999999875432 2345677
Q ss_pred HHHhcCCCeeEEec---CCCCCCCCceEEEEEeeccCCCCCCchhhhHhHH
Q 025715 178 CQLKLFFPVVTFAK---PKSSRNSSIEAFAVCENYFPPEGFNPKDLHRLLE 225 (249)
Q Consensus 178 ~~l~~~f~~v~~~k---P~~sr~~s~E~y~v~~g~~~~~~~~~~~~~~~~~ 225 (249)
..++..|..+..+. |.. ...-.+++|..-..+...++..++..++
T Consensus 211 ~~l~~~F~~v~~~~~~vP~~---~g~~~~~~as~~~~p~~~~~~~~~~~~~ 258 (314)
T 1uir_A 211 RTVREAFRYVRSYKNHIPGF---FLNFGFLLASDAFDPAAFSEGVIEARIR 258 (314)
T ss_dssp HHHHTTCSEEEEEEEEEGGG---TEEEEEEEEESSSCTTCCCTTHHHHHHH
T ss_pred HHHHHHCCceEEEEEecCCC---CCeEEEEEEECCCCcccCCHHHHHHHhh
Confidence 77888898887642 322 1112455665332344455544444333
No 133
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.06 E-value=4.7e-09 Score=95.11 Aligned_cols=109 Identities=18% Similarity=0.159 Sum_probs=78.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--CCCceEeecCCCChhhHHHHHHhcCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--IEGVIQVQGDITNARTAEVVIRHFDG 117 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~~~v~~~~gDi~~~~~~~~i~~~~~~ 117 (249)
.++.+|||+|||+|+++..++++.+ ....|+|+|+++... ..+++++++|+.+.. ..
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~------------~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~---------~~ 96 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHG------------TAYRFVGVEIDPKALDLPPWAEGILADFLLWE---------PG 96 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHC------------SCSEEEEEESCTTTCCCCTTEEEEESCGGGCC---------CS
T ss_pred CCCCEEEECCCCChHHHHHHHHHhC------------CCCeEEEEECCHHHHHhCCCCcEEeCChhhcC---------cc
Confidence 3467999999999999999998863 247999999998652 257888999987642 23
Q ss_pred CcccEEEeCCCCCCCCCC-C----cCHHHH--H-----------HHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 118 CKADLVVCDGAPDVTGLH-D----MDEFVQ--S-----------QLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 118 ~~~DlVlsD~~~~~~g~~-~----~~~~~~--~-----------~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
++||+|++|++....+.. . .+.... . .+....+..+.++|+|||.+++.+..
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 689999999865433221 0 111111 0 13346788899999999999986654
No 134
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.06 E-value=5.4e-10 Score=95.23 Aligned_cols=114 Identities=18% Similarity=0.169 Sum_probs=83.3
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--------CCC--ceEeecCCCChhhH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--------IEG--VIQVQGDITNARTA 108 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--------~~~--v~~~~gDi~~~~~~ 108 (249)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++... ..+ +++.++|+.+.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--------------~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~--- 179 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--------------GKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--- 179 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH---
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--------------CeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc---
Confidence 367899999999999999888764 3 3999999998531 112 67778876542
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-CCee
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FPVV 187 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f~~v 187 (249)
+..++||+|+++... ......+..+.++|+|||.+++..+.......+...++.. |+.+
T Consensus 180 ------~~~~~fD~Vv~n~~~--------------~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~ 239 (254)
T 2nxc_A 180 ------LPFGPFDLLVANLYA--------------ELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPL 239 (254)
T ss_dssp ------GGGCCEEEEEEECCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEE
T ss_pred ------CcCCCCCEEEECCcH--------------HHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEE
Confidence 234689999997531 1124567888999999999999776666677777777765 7766
Q ss_pred EEe
Q 025715 188 TFA 190 (249)
Q Consensus 188 ~~~ 190 (249)
...
T Consensus 240 ~~~ 242 (254)
T 2nxc_A 240 EEA 242 (254)
T ss_dssp EEE
T ss_pred EEe
Confidence 553
No 135
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.06 E-value=2.9e-10 Score=96.47 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=70.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+ .+++++.+|+.+.
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-- 127 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELP------------ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS-- 127 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred cCCCEEEEecCCchHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4778999999999999999998775 35899999999832 23 3688999987542
Q ss_pred HHHHHHhcC-CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~-~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+. .++||+|++|+... + ....+..+.++|||||.+++.
T Consensus 128 ----l~~~~~~~~fD~V~~d~~~~-------~-------~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 128 ----LESLGECPAFDLIFIDADKP-------N-------NPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp ----HHTCCSCCCCSEEEECSCGG-------G-------HHHHHHHHHHTCCTTCEEEEE
T ss_pred ----HHhcCCCCCeEEEEECCchH-------H-------HHHHHHHHHHhcCCCeEEEEe
Confidence 11222 24899999987321 1 123577888999999999875
No 136
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.05 E-value=4.9e-10 Score=101.28 Aligned_cols=122 Identities=16% Similarity=0.096 Sum_probs=80.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC--CceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~--~v~~~~gDi~~~~ 106 (249)
.++.+|||+|||+|+++..++... ..+|++||+++.+ .+. +++++++|+.+.-
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--------------a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l 276 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--------------AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYF 276 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--------------BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 478899999999999999998742 2589999999853 233 7889999986521
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC-CHHHHHHHHh
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-DTSLLYCQLK 181 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~-~~~~l~~~l~ 181 (249)
..... .+.+||+|++|++....+..... ...+.+..++..+.++|+|||.+++...... ....+...+.
T Consensus 277 --~~~~~--~~~~fD~Ii~DPP~~~~~~~~~~--~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~ 346 (385)
T 2b78_A 277 --KYARR--HHLTYDIIIIDPPSFARNKKEVF--SVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIE 346 (385)
T ss_dssp --HHHHH--TTCCEEEEEECCCCC-----CCC--CHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred --HHHHH--hCCCccEEEECCCCCCCChhhHH--HHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHH
Confidence 11111 23589999999753211101111 1233445678889999999999998776433 3344444443
No 137
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.05 E-value=2.2e-10 Score=94.96 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=71.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++.++++.++ +.++|+++|+++.. .+. +++++++|+.+.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 122 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLS------------SGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS-- 122 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC------------SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred hCCCEEEEecCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4678999999999999999998774 35799999999732 233 488899998642
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+... ..++||+|++|+... . ....+..+.++|+|||.+++.
T Consensus 123 ~~~~~~~-~~~~fD~v~~d~~~~-------~-------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 123 LQQIENE-KYEPFDFIFIDADKQ-------N-------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HHHHHHT-TCCCCSEEEECSCGG-------G-------HHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHHHhc-CCCCcCEEEEcCCcH-------H-------HHHHHHHHHHhcCCCcEEEEe
Confidence 1122211 125799999997421 1 124677888999999998875
No 138
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.05 E-value=2.7e-10 Score=94.94 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=78.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+++. + .+|+++|+++.. ..++++++++|+.+..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 104 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-A--------------ARWAAYDFSPELLKLARANAPHADVYEWNGKGEL------- 104 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-S--------------SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSC-------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHhCCCceEEEcchhhcc-------
Confidence 67899999999999999999876 3 699999999842 1467899999995421
Q ss_pred hcC-CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc-CCCeeEE
Q 025715 114 HFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL-FFPVVTF 189 (249)
Q Consensus 114 ~~~-~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~-~f~~v~~ 189 (249)
.+. +++||+|+++.. .. ..+..+.++|||||.|+ ..........+...+.. -|..+.+
T Consensus 105 ~~~~~~~fD~v~~~~~--------~~---------~~l~~~~~~LkpgG~l~-~~~~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 105 PAGLGAPFGLIVSRRG--------PT---------SVILRLPELAAPDAHFL-YVGPRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp CTTCCCCEEEEEEESC--------CS---------GGGGGHHHHEEEEEEEE-EEESSSCCTHHHHHHHHTTCEEEEE
T ss_pred CCcCCCCEEEEEeCCC--------HH---------HHHHHHHHHcCCCcEEE-EeCCcCCHHHHHHHHHHCCCeEEEE
Confidence 123 578999999721 11 35667889999999999 23333344455555554 3555443
No 139
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.05 E-value=6.5e-10 Score=92.79 Aligned_cols=96 Identities=21% Similarity=0.239 Sum_probs=72.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CCCCceEeecCCCChhhHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~~~v~~~~gDi~~~~~~~~i 111 (249)
.++.+|||+|||+|.++..+++. + ...|+++|+++.. ...+++++++|+.+.+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~----- 102 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-G-------------ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH----- 102 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-----
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-C-------------CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-----
Confidence 46789999999999999998875 3 1399999999732 1236888899987643
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+..++||+|++....... .+. ..++..+.++|+|||.+++.+.
T Consensus 103 ---~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 103 ---LPQDSFDLAYSSLALHYV----EDV-------ARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp ---CCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCCceEEEEecccccc----chH-------HHHHHHHHHhcCcCcEEEEEeC
Confidence 345789999997654322 121 3568888999999999999764
No 140
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.05 E-value=5.2e-10 Score=93.87 Aligned_cols=109 Identities=17% Similarity=0.099 Sum_probs=78.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++. + .+|+++|+++.. .+ +++++..+|+.+..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 153 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-A--------------GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE- 153 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-C--------------CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-
Confidence 57899999999999999999887 4 699999999732 12 56888899987631
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcCCCee
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVV 187 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~f~~v 187 (249)
+.+++||+|+++... . ..++..+.++|+|||.+++.+.......++...++..|..+
T Consensus 154 -------~~~~~~D~v~~~~~~-------~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~f~~~ 210 (248)
T 2yvl_A 154 -------VPEGIFHAAFVDVRE-------P---------WHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENYFGNL 210 (248)
T ss_dssp -------CCTTCBSEEEECSSC-------G---------GGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTTEEEE
T ss_pred -------cCCCcccEEEECCcC-------H---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCcc
Confidence 134689999997531 1 13567788999999999986543334445555544334443
No 141
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.05 E-value=6e-10 Score=97.05 Aligned_cols=101 Identities=17% Similarity=0.084 Sum_probs=73.1
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~ 106 (249)
+.++.+|||+|||+|.++..++.... +...|+++|+++.. .. .+++++++|+.+.+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 183 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSAC------------PGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD 183 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTC------------TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC------------CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC
Confidence 36889999999999999988853222 35799999999732 11 23889999998753
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+. ++||+|+++...... .+.. .....+..+.++|||||.|++..+
T Consensus 184 --------~~-~~fD~v~~~~~~~~~----~~~~----~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 184 --------TR-EGYDLLTSNGLNIYE----PDDA----RVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp --------CC-SCEEEEECCSSGGGC----CCHH----HHHHHHHHHHHHEEEEEEEEEECC
T ss_pred --------cc-CCeEEEEECChhhhc----CCHH----HHHHHHHHHHHhcCCCeEEEEEec
Confidence 24 789999997644321 1221 123468888999999999998764
No 142
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=6.4e-10 Score=100.85 Aligned_cols=115 Identities=18% Similarity=0.118 Sum_probs=76.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--------CCC--ceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--------IEG--VIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--------~~~--v~~~~gDi~~~~~~~ 109 (249)
++|.+|||+|||+|+|+..++.. + ..|+++|+++.+. ..+ ..+.++|+.+.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~-g--------------a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~---- 273 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK-G--------------AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPT---- 273 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHH----
T ss_pred cCCCeEEEcccchhHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHH----
Confidence 56899999999999999999875 3 3599999998431 112 24557776542
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC-CCHHHHHH
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG-KDTSLLYC 178 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~-~~~~~l~~ 178 (249)
...+.+ .||+|++|++.-..+ ..+.....+.+..++..+.++|+|||.|++.++.. .....+..
T Consensus 274 --l~~~~~-~fD~Ii~dpP~f~~~--~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~ 338 (393)
T 4dmg_A 274 --LRGLEG-PFHHVLLDPPTLVKR--PEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLE 338 (393)
T ss_dssp --HHTCCC-CEEEEEECCCCCCSS--GGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHH
T ss_pred --HHHhcC-CCCEEEECCCcCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHH
Confidence 122333 499999997532211 12333345556778999999999999999766643 33344333
No 143
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.04 E-value=7.6e-10 Score=96.88 Aligned_cols=142 Identities=17% Similarity=0.062 Sum_probs=91.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------------CCCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------------~~~~v~~~~gDi~~ 104 (249)
.++.+|||+|||+|+++..+++..+ ..+|++||+++.. ..++++++.+|+.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 160 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-------------VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-------------CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-------------CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 4668999999999999999987532 4699999999731 12468888898754
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHH-HHHHHHHHHhccCCCEEEEEEecCC----CHHHHHHH
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI-LAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQ 179 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~-~~~l~~a~~~Lk~gG~lv~k~~~~~----~~~~l~~~ 179 (249)
.. ....+++||+|++|..... + .. ..+. ...+..+.++|+|||.|++...... ....+...
T Consensus 161 ~~------~~~~~~~fDvIi~d~~~~~-~---~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 226 (304)
T 3bwc_A 161 FV------RQTPDNTYDVVIIDTTDPA-G---PA----SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRF 226 (304)
T ss_dssp HH------HSSCTTCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHH
T ss_pred HH------HhccCCceeEEEECCCCcc-c---cc----hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHH
Confidence 21 1113578999999874321 1 00 1111 3578889999999999998654332 23456667
Q ss_pred HhcC-CCeeEEecC-CCCCCCCceEEEEEee
Q 025715 180 LKLF-FPVVTFAKP-KSSRNSSIEAFAVCEN 208 (249)
Q Consensus 180 l~~~-f~~v~~~kP-~~sr~~s~E~y~v~~g 208 (249)
++.. |..+..+.- ..+.+...-.+++|..
T Consensus 227 l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 227 IRETGFASVQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp HHHHTCSEEEEEECCCTTSTTSCCEEEEEES
T ss_pred HHhCCCCcEEEEEeecccccCcceEEEEEeC
Confidence 7777 988877532 2233233235666654
No 144
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.04 E-value=3.9e-10 Score=96.11 Aligned_cols=98 Identities=17% Similarity=0.187 Sum_probs=75.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+++..+ ...|+++|+++.. ..+++.+..+|+.+.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-------------EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-------------TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-------------CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-------
Confidence 5788999999999999999988753 3699999999742 1356788899987643
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHH
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l 176 (249)
+.+++||+|++...+. .+..+.++|||||.+++.+.......++
T Consensus 144 -~~~~~fD~v~~~~~~~------------------~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 187 (269)
T 1p91_A 144 -FSDTSMDAIIRIYAPC------------------KAEELARVVKPGGWVITATPGPRHLMEL 187 (269)
T ss_dssp -BCTTCEEEEEEESCCC------------------CHHHHHHHEEEEEEEEEEEECTTTTHHH
T ss_pred -CCCCceeEEEEeCChh------------------hHHHHHHhcCCCcEEEEEEcCHHHHHHH
Confidence 3457899999864321 3567889999999999977765554443
No 145
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.04 E-value=3.6e-09 Score=90.15 Aligned_cols=109 Identities=12% Similarity=0.118 Sum_probs=74.4
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC------C-----------CC-
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A-----------PI- 92 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~------~-----------~~- 92 (249)
.+.+.++ +.++.+|||+|||+|.++..++++.+ +.++|+|+|+++. . .+
T Consensus 34 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g------------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~ 100 (275)
T 3bkx_A 34 AIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVG------------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG 100 (275)
T ss_dssp HHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHC------------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG
T ss_pred HHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhC------------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCC
Confidence 3334443 36789999999999999999998874 3579999999984 1 01
Q ss_pred CCceEeecC-CCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 93 EGVIQVQGD-ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 93 ~~v~~~~gD-i~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
++++++.+| +..... .+.+++||+|++........ +.. ..++....+++|||.+++..+.
T Consensus 101 ~~v~~~~~d~~~~~~~------~~~~~~fD~v~~~~~l~~~~----~~~-------~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 101 DRLTVHFNTNLSDDLG------PIADQHFDRVVLAHSLWYFA----SAN-------ALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp GGEEEECSCCTTTCCG------GGTTCCCSEEEEESCGGGSS----CHH-------HHHHHHHHHTTTCSEEEEEEEC
T ss_pred CceEEEECChhhhccC------CCCCCCEEEEEEccchhhCC----CHH-------HHHHHHHHHhCCCCEEEEEEec
Confidence 468888888 332110 13457899999987553321 221 2345556667779999997764
No 146
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.04 E-value=1.3e-10 Score=99.01 Aligned_cols=93 Identities=17% Similarity=0.094 Sum_probs=69.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|..+..++...+ ..+|+++|+++.+ .+.+++++++|+.+...
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~- 144 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP-------------ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR- 144 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc-
Confidence 4678999999999999999988754 5799999999842 24578999998765321
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
.....++||+|+|.... + ....+..+.++|||||.|++
T Consensus 145 ----~~~~~~~fD~I~s~a~~--------~-------~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 145 ----EAGHREAYARAVARAVA--------P-------LCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp ----STTTTTCEEEEEEESSC--------C-------HHHHHHHHGGGEEEEEEEEE
T ss_pred ----ccccCCCceEEEECCcC--------C-------HHHHHHHHHHHcCCCeEEEE
Confidence 00013689999997521 1 12467888999999999987
No 147
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.04 E-value=2.1e-10 Score=95.30 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=71.0
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C-------CCCceEeecCC
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-------IEGVIQVQGDI 102 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~-------~~~v~~~~gDi 102 (249)
++++.+|||+|||+|.++..+++.++ +.++|+++|+++.. . ..+++++++|+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVG------------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHC------------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhC------------CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 46789999999999999999998875 34799999999732 0 24688889998
Q ss_pred CChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
.+.. ....+||+|+++..+.. .+..+.++|||||.+++.+..
T Consensus 143 ~~~~--------~~~~~fD~i~~~~~~~~-----------------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 143 RMGY--------AEEAPYDAIHVGAAAPV-----------------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGCC--------GGGCCEEEEEECSBBSS-----------------CCHHHHHTEEEEEEEEEEESC
T ss_pred ccCc--------ccCCCcCEEEECCchHH-----------------HHHHHHHhcCCCcEEEEEEec
Confidence 6432 12357999999875421 124567899999999997653
No 148
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.04 E-value=4.7e-10 Score=92.00 Aligned_cols=97 Identities=18% Similarity=0.202 Sum_probs=73.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+ + ..+|+++|+++.. ..++++++++|+.+.+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 90 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----P-------------YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP------- 90 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----C-------------CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC-------
T ss_pred CCCCeEEEECCCCCHhHHhC----C-------------CCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC-------
Confidence 47889999999999998776 3 1389999999742 1257888999987753
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~ 172 (249)
+.+++||+|++....... .+. ..++..+.++|||||.+++.++....
T Consensus 91 -~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 91 -FPGESFDVVLLFTTLEFV----EDV-------ERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp -SCSSCEEEEEEESCTTTC----SCH-------HHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred -CCCCcEEEEEEcChhhhc----CCH-------HHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 345789999998654332 121 25788889999999999998876544
No 149
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.03 E-value=7.7e-10 Score=91.39 Aligned_cols=97 Identities=23% Similarity=0.208 Sum_probs=71.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CCCCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~~~v~~~~gDi~~~~~~~ 109 (249)
.++.+|||+|||+|.++..+++.. .+|+++|+++.. .-.+++++++|+.+.+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--- 98 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---------------FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS--- 98 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC---
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC---
Confidence 568899999999999998888753 399999999732 0157889999998743
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+..++||+|+++...... ... -...++..+.++|+|||.+++...
T Consensus 99 -----~~~~~~D~v~~~~~~~~~---~~~------~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 99 -----FEDKTFDYVIFIDSIVHF---EPL------ELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp -----SCTTCEEEEEEESCGGGC---CHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CCCCcEEEEEEcCchHhC---CHH------HHHHHHHHHHHHcCCCcEEEEEec
Confidence 345689999998642111 111 123578888999999999998655
No 150
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.03 E-value=8e-10 Score=91.23 Aligned_cols=100 Identities=12% Similarity=-0.014 Sum_probs=70.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------------CCCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------------~~~~v~~~~gDi~~ 104 (249)
+++.+|||+|||+|.++..++++.+ ..+|+|+|+++.. .+++++++++|+.+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 92 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNP-------------SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER 92 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCT-------------TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh
Confidence 6789999999999999999998753 5799999999841 13478999999987
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
.+ +..++ |.|....+.. ........-...++..+.++|||||.|++.+
T Consensus 93 l~--------~~~~~-d~v~~~~~~~------~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 93 LP--------PLSGV-GELHVLMPWG------SLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CC--------SCCCE-EEEEEESCCH------HHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CC--------CCCCC-CEEEEEccch------hhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 54 23344 7776433210 0000000001457888999999999999854
No 151
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.03 E-value=3.7e-10 Score=98.84 Aligned_cols=106 Identities=15% Similarity=0.105 Sum_probs=69.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---------CC--------CceEeecCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------IE--------GVIQVQGDIT 103 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---------~~--------~v~~~~gDi~ 103 (249)
++.+|||||||+|+.+..++... ...|+|+|+++... .. ++++.++|+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--------------~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~ 113 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--------------IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIR 113 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTT
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--------------CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcc
Confidence 57899999999998766555432 36899999998420 01 1456677775
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.......+...+..++||+|+|..+..+. .+..+ ...++..+.++|||||.|++.+.
T Consensus 114 ~d~~~~~l~~~~~~~~FD~V~~~~~lhy~--~~~~~------~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 114 SDTFVSSVREVFYFGKFNIIDWQFAIHYS--FHPRH------YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SSSHHHHHHTTCCSSCEEEEEEESCGGGT--CSTTT------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhhhhhccccCCCeeEEEECchHHHh--CCHHH------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 43322233333456799999987654321 11111 13578899999999999998765
No 152
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.03 E-value=5e-10 Score=91.49 Aligned_cols=100 Identities=17% Similarity=0.083 Sum_probs=72.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~ 109 (249)
.++.+|||+|||+|.++..++... ..+|+|+|+++... -.+++++++|+.+.+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--- 84 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVED--------------GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP--- 84 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHT--------------TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC---
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC--------------CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC---
Confidence 577899999999999855444443 36999999997320 146788999998743
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
+.+++||+|++...... ... .....++..+.++|||||.+++..+..
T Consensus 85 -----~~~~~fD~v~~~~~l~~-----~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 85 -----FKDESMSFVYSYGTIFH-----MRK----NDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp -----SCTTCEEEEEECSCGGG-----SCH----HHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred -----CCCCceeEEEEcChHHh-----CCH----HHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 34578999999754322 111 113457888899999999999987754
No 153
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.03 E-value=3.8e-10 Score=93.57 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=70.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+ .+++++++|+.+.
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 128 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALP------------KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT-- 128 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC------------TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCC------------CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH--
Confidence 4678999999999999999998764 35899999999732 12 3488899987542
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+......++||+|++|+... + ....+..+.++|+|||.+++.
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~~~-------~-------~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDADKA-------N-------TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSCGG-------G-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhhhccCCCCccEEEECCCHH-------H-------HHHHHHHHHHhcCCCcEEEEe
Confidence 11111111116899999987411 1 124677888999999999985
No 154
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.02 E-value=7.3e-10 Score=99.93 Aligned_cols=109 Identities=20% Similarity=0.207 Sum_probs=78.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~~ 109 (249)
++.+|||+|||+|+++..++.. . .+|+++|+++.. .+.+++++++|+.+.. .
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~--~ 271 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-F--------------REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL--R 271 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-E--------------EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH--H
T ss_pred CCCeEEEeeeccCHHHHHHHHh-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHH--H
Confidence 6789999999999999999987 4 699999999842 2355889999986532 1
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
.+.. .+.+||+|++|++..... ........+.+...+..+.++|+|||.|++.+...
T Consensus 272 ~~~~--~~~~fD~Ii~dpP~~~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 272 RLEK--EGERFDLVVLDPPAFAKG--KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp HHHH--TTCCEEEEEECCCCSCCS--TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHh--cCCCeeEEEECCCCCCCC--hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1111 246899999997532211 12223334556678899999999999999977753
No 155
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.02 E-value=3e-10 Score=90.42 Aligned_cols=112 Identities=13% Similarity=0.121 Sum_probs=80.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++ + ..+|+++|+++.. .+++++++++|+.+.
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--- 95 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--R-------------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV--- 95 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--T-------------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH---
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--c-------------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc---
Confidence 5778999999999999999987 2 3799999999732 135688888987652
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcCCCeeE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVT 188 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~f~~v~ 188 (249)
+..++||+|+++.. . +. ...+..+.++ |||.+++.........++...++.+-..+.
T Consensus 96 ------~~~~~~D~i~~~~~------~--~~-------~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 96 ------LDKLEFNKAFIGGT------K--NI-------EKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVD 152 (183)
T ss_dssp ------GGGCCCSEEEECSC------S--CH-------HHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEE
T ss_pred ------ccCCCCcEEEECCc------c--cH-------HHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEE
Confidence 23368999999865 1 11 2345566666 999999977665566667777776544555
Q ss_pred EecC
Q 025715 189 FAKP 192 (249)
Q Consensus 189 ~~kP 192 (249)
.+.+
T Consensus 153 ~~~~ 156 (183)
T 2yxd_A 153 AVNV 156 (183)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5433
No 156
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.02 E-value=1.3e-09 Score=90.81 Aligned_cols=95 Identities=26% Similarity=0.307 Sum_probs=69.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C----CCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I----EGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~----~~v~~~~gDi~~~~~~~~ 110 (249)
++.+|||+|||+|.++..+++. + .+|+++|+++... . .+++++++|+.+.+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~--------------~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---- 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-F--------------KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN---- 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-S--------------SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC----
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-C--------------CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC----
Confidence 6789999999999999988875 3 5899999997320 1 16888999987643
Q ss_pred HHHhcCCCcccEEEeCC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 111 VIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+. ++||+|++.. ..... .+.. ....++..+.++|+|||.+++.+
T Consensus 98 ----~~-~~fD~v~~~~~~l~~~----~~~~----~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 98 ----IN-RKFDLITCCLDSTNYI----IDSD----DLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp ----CS-CCEEEEEECTTGGGGC----CSHH----HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ----cc-CCceEEEEcCcccccc----CCHH----HHHHHHHHHHHhcCCCcEEEEEe
Confidence 23 6899999975 43321 1111 12457888899999999999854
No 157
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.02 E-value=6e-10 Score=91.94 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=71.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-----CCceEeecCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-----EGVIQVQGDIT 103 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-----~~v~~~~gDi~ 103 (249)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.. .+ ++++++++|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS-------------FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT-------------CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC-------------CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 4678999999999999999987643 4799999999732 01 17899999996
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
..+ +..++||+|++....... +.. ....++..+.++|||||.++...
T Consensus 95 ~~~--------~~~~~fD~V~~~~~l~~~-----~~~----~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 95 YRD--------KRFSGYDAATVIEVIEHL-----DEN----RLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp SCC--------GGGTTCSEEEEESCGGGC-----CHH----HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccc--------cccCCCCEEEEHHHHHhC-----CHH----HHHHHHHHHHHhhCCCEEEEEcc
Confidence 643 134689999987654322 211 12357888899999999776643
No 158
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.01 E-value=5.4e-10 Score=91.63 Aligned_cols=90 Identities=16% Similarity=0.213 Sum_probs=68.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
+++.+|||+|||+|.++..+++. + .+|+++|+++.. .+++++++.+|+.+...
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~-~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 139 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL-V--------------QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ- 139 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-C--------------CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-
Confidence 57899999999999999999887 3 699999999732 24578899999876321
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
..++||+|+++..+... .+ .+.++|+|||.+++.+..
T Consensus 140 -------~~~~~D~i~~~~~~~~~----~~-------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 -------ARAPFDAIIVTAAPPEI----PT-------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -------GGCCEEEEEESSBCSSC----CT-------------HHHHTEEEEEEEEEEECS
T ss_pred -------cCCCccEEEEccchhhh----hH-------------HHHHhcccCcEEEEEEcC
Confidence 23689999998754321 11 357899999999996543
No 159
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.01 E-value=3.4e-09 Score=88.35 Aligned_cols=96 Identities=17% Similarity=0.201 Sum_probs=69.0
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CCCCceEeecCCCChhhH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~~~v~~~~gDi~~~~~~ 108 (249)
+.++.+|||+|||+|.++..+++. ..|+++|+++.. .-.+++++++|+.+.+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 92 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----------------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-- 92 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----------------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----------------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC--
Confidence 357789999999999999887653 489999999732 0146788899987643
Q ss_pred HHHHHhcCCCcccEEEeCC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+. ++||+|++.. ..... .+. .....++..+.++|+|||.+++.+
T Consensus 93 ------~~-~~fD~v~~~~~~~~~~----~~~----~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 93 ------LP-EPVDAITILCDSLNYL----QTE----ADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp ------CS-SCEEEEEECTTGGGGC----CSH----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------CC-CCcCEEEEeCCchhhc----CCH----HHHHHHHHHHHHhcCCCeEEEEEc
Confidence 23 6899999864 32221 111 112456788899999999999854
No 160
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.01 E-value=5.4e-10 Score=99.14 Aligned_cols=122 Identities=14% Similarity=0.088 Sum_probs=78.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC--CceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~--~v~~~~gDi~~~~ 106 (249)
.++.+|||+|||+|+++..++.. + .+|++||+++.. .+. +++++++|+.+..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-g--------------a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-G--------------AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 216 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-T--------------CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH
Confidence 36789999999999999999874 3 499999999842 133 3889999986532
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC--CCHHHHHHHHh
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--KDTSLLYCQLK 181 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~--~~~~~l~~~l~ 181 (249)
..... ..++||+|++|++....+... ......+....++..+.++|+|||.|++..... .....+..+++
T Consensus 217 --~~~~~--~~~~fD~Ii~dPP~~~~~~~~-~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~ 288 (332)
T 2igt_A 217 --QREER--RGSTYDIILTDPPKFGRGTHG-EVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMR 288 (332)
T ss_dssp --HHHHH--HTCCBSEEEECCCSEEECTTC-CEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHH
T ss_pred --HHHHh--cCCCceEEEECCccccCCchH-HHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHH
Confidence 11110 136899999998522111100 000112234567888999999999977755432 23444555555
No 161
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.00 E-value=3e-10 Score=110.12 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=75.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC--CceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~--~v~~~~gDi~~~~ 106 (249)
.+|.+|||||||+|+++.+++.. + ..+|++||+++.+ .+. +++++++|+.+.-
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-g-------------a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l 603 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-G-------------ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL 603 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHH
T ss_pred cCCCcEEEeeechhHHHHHHHHC-C-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHH
Confidence 36889999999999999998863 2 3579999999842 133 6889999986521
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
.. ..++||+|++|++....+....+.....+.+...+..+.++|+|||.|++.+..
T Consensus 604 ------~~-~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 604 ------RE-ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ------HH-CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ------Hh-cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 11 346899999998532111110000112344567788999999999999986654
No 162
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.00 E-value=1.3e-09 Score=88.78 Aligned_cols=95 Identities=18% Similarity=0.091 Sum_probs=70.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~ 109 (249)
.++ +|||+|||+|.++..+++. + ..|+++|+++... -.++.++++|+.+.+
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--- 89 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL-G--------------YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD--- 89 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT-T--------------CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS---
T ss_pred CCC-CEEEECCCCCHhHHHHHhC-C--------------CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC---
Confidence 577 9999999999999888864 3 5999999997320 126788899998753
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+..++||+|++... .. .. ......+..+.++|+|||.+++.++.
T Consensus 90 -----~~~~~fD~v~~~~~-----~~--~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 90 -----IVADAWEGIVSIFC-----HL--PS----SLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp -----CCTTTCSEEEEECC-----CC--CH----HHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred -----CCcCCccEEEEEhh-----cC--CH----HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 34578999998531 11 11 11245788889999999999998763
No 163
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.00 E-value=9.2e-10 Score=93.02 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=72.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------------CCCCceEeec
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------------PIEGVIQVQG 100 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------------------~~~~v~~~~g 100 (249)
.++.+|||+|||+|.++..+++..+ ...|+|+|+++.. .++++.++++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~ 114 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFP-------------EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRG 114 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHST-------------TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-------------CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEec
Confidence 3678999999999999999998763 4799999999731 3467899999
Q ss_pred CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCC-CcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH-DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 101 Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~-~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
|+.+.- ...+..+++|.|+...+..+...+ ..... +....+..+.++|+|||.|++.+
T Consensus 115 D~~~~l-----~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~----~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 115 NAMKFL-----PNFFEKGQLSKMFFCFPDPHFKQRKHKARI----ITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CTTSCG-----GGTSCTTCEEEEEEESCCCC------CSSC----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cHHHHH-----HHhccccccCEEEEECCCcccccchhHHhh----ccHHHHHHHHHHcCCCCEEEEEe
Confidence 998621 112456789999765432211000 00000 01356788899999999999854
No 164
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.00 E-value=5.9e-10 Score=93.48 Aligned_cols=93 Identities=19% Similarity=0.184 Sum_probs=70.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.. +.++|+++|+++.. .+ ++++++.+|+.+..
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 135 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASIS-------------DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQF- 135 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTC-------------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCH-
T ss_pred cCCCEEEEEeCchhHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH-
Confidence 467899999999999999998744 25899999999732 23 37899999987631
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
. ..+ .++||+|++|.... + ....+..+.++|+|||.|++
T Consensus 136 -~---~~~-~~~fD~V~~~~~~~-------~-------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 136 -E---NVN-DKVYDMIFIDAAKA-------Q-------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp -H---HHT-TSCEEEEEEETTSS-------S-------HHHHHHHHGGGEEEEEEEEE
T ss_pred -H---hhc-cCCccEEEEcCcHH-------H-------HHHHHHHHHHhcCCCeEEEE
Confidence 1 012 46899999986421 1 12467888999999999987
No 165
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.00 E-value=8.2e-10 Score=98.48 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=70.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CCC-CceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIE-GVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~~-~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++. + ..+|+|+|++++. .+. +++++++|+.+.+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g-------------~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 128 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-G-------------ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-- 128 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-T-------------CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred CCCCEEEEEeccchHHHHHHHHC-C-------------CCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc--
Confidence 47789999999999999999876 3 3699999999732 122 3899999998753
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
++.++||+|+++....... .... ...++..+.++|||||.++.
T Consensus 129 ------~~~~~fD~Iis~~~~~~l~-~~~~-------~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 129 ------LPVEKVDIIISEWMGYCLF-YESM-------LNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ------CSSSCEEEEEECCCBBTBT-BTCC-------HHHHHHHHHHHEEEEEEEES
T ss_pred ------CCCCceEEEEEcccccccc-Cchh-------HHHHHHHHHHhCCCCCEEcc
Confidence 3457999999986322211 1111 23467778899999999873
No 166
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.00 E-value=7.5e-09 Score=89.29 Aligned_cols=124 Identities=14% Similarity=0.099 Sum_probs=85.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------C--CCCceEeecCCCCh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------P--IEGVIQVQGDITNA 105 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------------~--~~~v~~~~gDi~~~ 105 (249)
.+.+|||+|||+|+.+..++++.+ ..+|++||+++.. . .++++++.+|..+.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~ 141 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS-------------VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH 141 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT-------------CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH
T ss_pred CCCEEEEECCchHHHHHHHHhCCC-------------CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH
Confidence 468999999999999998886532 4799999999731 1 25788899997542
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC----CHHHHHHHHh
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQLK 181 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~----~~~~l~~~l~ 181 (249)
+. . ..++||+|++|............ ....+..+.++|+|||.|++....+. ....+...++
T Consensus 142 -----l~-~-~~~~fD~Ii~d~~~~~~~~~~l~-------~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~ 207 (275)
T 1iy9_A 142 -----IA-K-SENQYDVIMVDSTEPVGPAVNLF-------TKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVK 207 (275)
T ss_dssp -----HH-T-CCSCEEEEEESCSSCCSCCCCCS-------TTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHH
T ss_pred -----Hh-h-CCCCeeEEEECCCCCCCcchhhh-------HHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHH
Confidence 11 1 24689999999753211100000 02467788899999999999754432 1345667788
Q ss_pred cCCCeeEEec
Q 025715 182 LFFPVVTFAK 191 (249)
Q Consensus 182 ~~f~~v~~~k 191 (249)
..|..+..+.
T Consensus 208 ~~F~~v~~~~ 217 (275)
T 1iy9_A 208 EIFPITKLYT 217 (275)
T ss_dssp TTCSEEEEEE
T ss_pred HhCCCeEEEE
Confidence 8899887653
No 167
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.99 E-value=5.1e-10 Score=96.29 Aligned_cols=95 Identities=16% Similarity=0.025 Sum_probs=71.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C----CCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I----EGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~----~~v~~~~gDi~~~~~~~~ 110 (249)
++.+|||+|||+|.++..+++. + ..|+|+|+++... . .+++++++|+.+..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---- 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-G--------------YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN---- 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC----
T ss_pred CCCcEEEECCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHHHHHcCCceEEEEecccccc----
Confidence 6789999999999999999876 3 5999999998421 0 16888999987643
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+ .++||+|+++..+..... + .....+..+.++|+|||.+++...
T Consensus 181 ----~-~~~fD~i~~~~~~~~~~~---~------~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 181 ----I-QENYDFIVSTVVFMFLNR---E------RVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp ----C-CSCEEEEEECSSGGGSCG---G------GHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ----c-cCCccEEEEccchhhCCH---H------HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1 578999999875543211 1 123578888999999999887543
No 168
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.99 E-value=2.6e-09 Score=96.98 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=70.9
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------------CC--CCceEe
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------PI--EGVIQV 98 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------------~~--~~v~~~ 98 (249)
++++.+|||||||+|..+..++...+ ..+|+|||+++.. .+ .+++++
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g-------------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi 237 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATN-------------CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE 237 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCC-------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 36889999999999999999987654 3469999999621 11 468999
Q ss_pred ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+||+.+.+... .+ ..+|+|+++.... ... ...+|....+.|||||.||+.
T Consensus 238 ~GD~~~lp~~d----~~--~~aDVVf~Nn~~F-------~pd-----l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 238 RGDFLSEEWRE----RI--ANTSVIFVNNFAF-------GPE-----VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ECCTTSHHHHH----HH--HTCSEEEECCTTC-------CHH-----HHHHHHHHHTTSCTTCEEEES
T ss_pred ECcccCCcccc----cc--CCccEEEEccccc-------Cch-----HHHHHHHHHHcCCCCcEEEEe
Confidence 99999875321 12 3699999985321 111 124566778999999999975
No 169
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.99 E-value=1.6e-09 Score=94.55 Aligned_cols=141 Identities=14% Similarity=0.105 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------C--CCCceEeecCCCCh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------P--IEGVIQVQGDITNA 105 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------------~--~~~v~~~~gDi~~~ 105 (249)
++.+|||+|||+|+++..++++.+ ..+|++||+++.. . .++++++.+|..+.
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 156 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS-------------VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY 156 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT-------------CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC-------------CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH
Confidence 458999999999999999987643 4799999999731 0 25688888987542
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHH-HHHHHHHHHHhccCCCEEEEEEecCC----CHHHHHHHH
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQL 180 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~Lk~gG~lv~k~~~~~----~~~~l~~~l 180 (249)
- . ...++||+|++|......+.. ..+ ....+..+.++|+|||.|++....+. ....+...+
T Consensus 157 l------~-~~~~~fD~Ii~d~~~~~~~~~-------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 222 (296)
T 1inl_A 157 V------R-KFKNEFDVIIIDSTDPTAGQG-------GHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRI 222 (296)
T ss_dssp G------G-GCSSCEEEEEEEC-----------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHH
T ss_pred H------h-hCCCCceEEEEcCCCcccCch-------hhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHH
Confidence 1 1 124689999999743211110 011 13567888999999999999754432 234566667
Q ss_pred hcCCCeeEEecC-CCCCCCCceEEEEEee
Q 025715 181 KLFFPVVTFAKP-KSSRNSSIEAFAVCEN 208 (249)
Q Consensus 181 ~~~f~~v~~~kP-~~sr~~s~E~y~v~~g 208 (249)
+..|..+..+.. ..+-+...-.+++|..
T Consensus 223 ~~~F~~v~~~~~~vp~~p~g~~~f~~as~ 251 (296)
T 1inl_A 223 SKVFPITRVYLGFMTTYPSGMWSYTFASK 251 (296)
T ss_dssp HHHCSEEEEEEEECTTSTTSEEEEEEEES
T ss_pred HHHCCceEEEEeecCccCCCceEEEEecC
Confidence 777988876531 1122223335666653
No 170
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.98 E-value=1.7e-09 Score=86.22 Aligned_cols=99 Identities=17% Similarity=0.132 Sum_probs=68.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..++++ + ..+|+++|+++.. .+ ++++++++|+.+..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 94 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-G-------------MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI- 94 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-T-------------CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH-
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH-
Confidence 46789999999999999998875 3 3699999999732 12 35788888876521
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHH--HHhccCCCEEEEEEecCC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFRGK 171 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a--~~~Lk~gG~lv~k~~~~~ 171 (249)
... .++||+|++|+.... .. ....+... .++|+|||.+++.+....
T Consensus 95 -----~~~-~~~fD~i~~~~~~~~--------~~----~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 95 -----DCL-TGRFDLVFLDPPYAK--------ET----IVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp -----HHB-CSCEEEEEECCSSHH--------HH----HHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred -----Hhh-cCCCCEEEECCCCCc--------ch----HHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 122 357999999864210 01 11222333 489999999999766443
No 171
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.98 E-value=4.3e-09 Score=90.75 Aligned_cols=108 Identities=14% Similarity=0.121 Sum_probs=76.9
Q ss_pred CCCeEEEEcCCC---ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAP---GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gp---G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~ 108 (249)
+..+|||||||+ |.++..+.+.. +..+|+++|+++.. ..++++++++|+.+....
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-------------p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~ 143 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-------------PDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYI 143 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-------------TTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-------------CCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhh
Confidence 347999999999 99887776654 35799999999732 125789999999986432
Q ss_pred ---HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 109 ---EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 109 ---~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
..+.+.+...++|+|++......... .+ ...++..+.++|+|||.|++..+..
T Consensus 144 ~~~~~~~~~~d~~~~d~v~~~~vlh~~~d--~~-------~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 144 LNHPDVRRMIDFSRPAAIMLVGMLHYLSP--DV-------VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHSHHHHHHCCTTSCCEEEETTTGGGSCT--TT-------HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hccchhhccCCCCCCEEEEEechhhhCCc--HH-------HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 11113344458999999876543211 11 1357888999999999999987754
No 172
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.98 E-value=5.5e-10 Score=95.43 Aligned_cols=127 Identities=13% Similarity=0.075 Sum_probs=80.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-------------C--------------
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------------I-------------- 92 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-------------~-------------- 92 (249)
.+|.+|||||||||.++..++... ...|+|+|+++... +
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--------------~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~ 119 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--------------FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEG 119 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--------------EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTT
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--------------hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCC
Confidence 478899999999998876655432 14799999997210 0
Q ss_pred -------------CCce-EeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcc
Q 025715 93 -------------EGVI-QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (249)
Q Consensus 93 -------------~~v~-~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk 158 (249)
.++. ++++|+.+.... .....++||+|++.....+.. .+ ..-...++..+.++||
T Consensus 120 ~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~----~~~~~~~fD~V~~~~~l~~i~---~~----~~~~~~~l~~i~r~LK 188 (263)
T 2a14_A 120 NSGRWEEKEEKLRAAVKRVLKCDVHLGNPL----APAVLPLADCVLTLLAMECAC---CS----LDAYRAALCNLASLLK 188 (263)
T ss_dssp CGGGHHHHHHHHHHHEEEEEECCTTSSSTT----TTCCCCCEEEEEEESCHHHHC---SS----HHHHHHHHHHHHTTEE
T ss_pred CCcchhhHHHHHHhhhheEEeccccCCCCC----CccccCCCCEeeehHHHHHhc---CC----HHHHHHHHHHHHHHcC
Confidence 0122 678888773210 001246899999986532210 01 0112457888999999
Q ss_pred CCCEEEEEEecC---------------CCHHHHHHHHhcC-CCeeEEec
Q 025715 159 EGGKFIAKIFRG---------------KDTSLLYCQLKLF-FPVVTFAK 191 (249)
Q Consensus 159 ~gG~lv~k~~~~---------------~~~~~l~~~l~~~-f~~v~~~k 191 (249)
|||.|++..... ....++...+... |..+.+..
T Consensus 189 PGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 189 PGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp EEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEee
Confidence 999999875321 1455677777654 77666643
No 173
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.97 E-value=9.4e-10 Score=90.36 Aligned_cols=96 Identities=10% Similarity=0.033 Sum_probs=66.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~~ 109 (249)
++.+|||+|||+|.++..++.+.. .+|+++|+++.. .+++++++++|+.+..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~--------------~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~--- 116 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA--------------AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL--- 116 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC--------------SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH---
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC--------------CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH---
Confidence 678999999999999998776532 589999999732 1357888999875421
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHH--HHhccCCCEEEEEEec
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFR 169 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a--~~~Lk~gG~lv~k~~~ 169 (249)
....++||+|++|+++. .+ .. ...+... .++|+|||.+++....
T Consensus 117 ----~~~~~~fD~V~~~~p~~-~~----~~-------~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 ----AQKGTPHNIVFVDPPFR-RG----LL-------EETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ----SSCCCCEEEEEECCSSS-TT----TH-------HHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ----hhcCCCCCEEEECCCCC-CC----cH-------HHHHHHHHhcCccCCCcEEEEEECC
Confidence 11346899999997632 11 11 1223333 3569999999986654
No 174
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.97 E-value=1.7e-09 Score=85.27 Aligned_cols=100 Identities=14% Similarity=0.118 Sum_probs=67.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~~ 109 (249)
++.+|||+|||+|.++..++++. ..|+|+|+++.. .+ +++++++|+.+.. .
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~ 102 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---------------WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFL--P 102 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---------------CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHH--H
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---------------CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHH--H
Confidence 77899999999999999998763 349999999742 12 6888899886531 1
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~ 171 (249)
.... ..++||+|++|++.. + ..... . ..+.. .++|+|||.+++.+....
T Consensus 103 ~~~~--~~~~~D~i~~~~~~~--~--~~~~~-----~-~~~~~-~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 103 EAKA--QGERFTVAFMAPPYA--M--DLAAL-----F-GELLA-SGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHH--TTCCEEEEEECCCTT--S--CTTHH-----H-HHHHH-HTCEEEEEEEEEEEETTS
T ss_pred hhhc--cCCceEEEEECCCCc--h--hHHHH-----H-HHHHh-hcccCCCcEEEEEeCCcc
Confidence 1111 234799999997643 1 12211 1 11222 589999999999766443
No 175
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.97 E-value=8.6e-10 Score=96.88 Aligned_cols=93 Identities=26% Similarity=0.284 Sum_probs=70.1
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~ 107 (249)
++++.+|||+|||+|.++..+++..+ ..++|+++|+++.. .++++++..+|+.+...
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVG------------EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 36889999999999999999998764 24789999999732 23568889999876321
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
..++||+|+++...... . ..+.++|||||.+++.+.
T Consensus 141 --------~~~~fD~Iv~~~~~~~~-----~------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 141 --------EFSPYDVIFVTVGVDEV-----P------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp --------GGCCEEEEEECSBBSCC-----C------------HHHHHHEEEEEEEEEEBC
T ss_pred --------cCCCeEEEEEcCCHHHH-----H------------HHHHHhcCCCcEEEEEEC
Confidence 23579999999765322 1 235679999999998643
No 176
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.96 E-value=3.5e-09 Score=88.06 Aligned_cols=98 Identities=15% Similarity=0.221 Sum_probs=72.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+++.. ..|+++|+++.. ..++++++++|+.+.+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---------------GDTAGLELSEDMLTHARKRLPDATLHQGDMRDFR------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---------------SEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCC-------
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---------------CcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcc-------
Confidence 577899999999999999998874 389999998742 1367889999998753
Q ss_pred hcCCCcccEEEeCC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 114 HFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 114 ~~~~~~~DlVlsD~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+ .++||+|+|.. .+... .+. .....++..+.++|+|||.+++..+.
T Consensus 97 -~-~~~~D~v~~~~~~~~~~----~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 97 -L-GRKFSAVVSMFSSVGYL----KTT----EELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp -C-SSCEEEEEECTTGGGGC----CSH----HHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred -c-CCCCcEEEEcCchHhhc----CCH----HHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 2 46899999633 22211 111 11245788889999999999986553
No 177
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.96 E-value=1.9e-09 Score=88.78 Aligned_cols=108 Identities=20% Similarity=0.215 Sum_probs=76.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhc
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHF 115 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~ 115 (249)
.++.+|||+|||+|.++..+++. + .+|+++|+++... -...+++.+|+.+... .+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~------~~ 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--------------TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDM------PY 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--------------CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCC------CS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCC------CC
Confidence 57889999999999999998876 4 6999999987321 1123678888875211 13
Q ss_pred CCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHH
Q 025715 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQ 179 (249)
Q Consensus 116 ~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~ 179 (249)
.+++||+|++....... .+. ..++..+.++|+|||.+++.+........+...
T Consensus 90 ~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 142 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEHL----FDP-------WAVIEKVKPYIKQNGVILASIPNVSHISVLAPL 142 (230)
T ss_dssp CTTCEEEEEEESCGGGS----SCH-------HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHH
T ss_pred CCCccCEEEECChhhhc----CCH-------HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHH
Confidence 45789999997654321 121 256788899999999999987665555444443
No 178
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.96 E-value=3.5e-09 Score=89.06 Aligned_cols=97 Identities=26% Similarity=0.276 Sum_probs=69.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~ 109 (249)
+++.+|||+|||+|.++..+++. + ..|+|+|+++... -.+++++++|+.+.+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~--- 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER-G--------------YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA--- 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC---
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc---
Confidence 46789999999999999998875 3 6899999997320 125788999987643
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+ .++||+|++...... . ... .....++..+.++|+|||.+++.+.
T Consensus 102 -----~-~~~fD~v~~~~~~~~--~--~~~----~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 102 -----F-KNEFDAVTMFFSTIM--Y--FDE----EDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp -----C-CSCEEEEEECSSGGG--G--SCH----HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----c-CCCccEEEEcCCchh--c--CCH----HHHHHHHHHHHHHcCCCeEEEEecc
Confidence 2 368999998642111 0 111 1234578888999999999998543
No 179
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.96 E-value=1.6e-09 Score=95.67 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=84.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C------CCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P------IEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~------~~~v~~~~gDi~~ 104 (249)
.++.+|||+|||+|+++..+++..+ ..+|+++|+++.. . .++++++.+|+.+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~ 181 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-------------VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 181 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-------------CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-------------CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH
Confidence 3568999999999999999886532 4799999999731 1 2468888998754
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHH-HHHHHHHHHhccCCCEEEEEEecCC----CHHHHHHH
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI-LAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQ 179 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~-~~~l~~a~~~Lk~gG~lv~k~~~~~----~~~~l~~~ 179 (249)
. +. . ..++||+|++|..... +. . ..+. ...+..+.++|+|||.+++....+. ....+...
T Consensus 182 ~-----l~-~-~~~~fDvIi~d~~~p~-~~---~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 246 (321)
T 2pt6_A 182 F-----LE-N-VTNTYDVIIVDSSDPI-GP---A----ETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGY 246 (321)
T ss_dssp H-----HH-H-CCSCEEEEEEECCCSS-SG---G----GGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHH
T ss_pred H-----Hh-h-cCCCceEEEECCcCCC-Cc---c----hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHH
Confidence 2 11 1 2468999999974211 11 0 0111 3567888999999999999654332 23456667
Q ss_pred HhcCCCeeEEe
Q 025715 180 LKLFFPVVTFA 190 (249)
Q Consensus 180 l~~~f~~v~~~ 190 (249)
++..|..+..+
T Consensus 247 l~~~F~~v~~~ 257 (321)
T 2pt6_A 247 AKKLFKKVEYA 257 (321)
T ss_dssp HHTTCSEEEEE
T ss_pred HHHHCCCeEEE
Confidence 77789888665
No 180
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.96 E-value=1.5e-09 Score=98.19 Aligned_cols=111 Identities=20% Similarity=0.197 Sum_probs=78.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~~ 107 (249)
+++.+|||+|||+|+++..++.. + ..+|+|+|+++.. .+. +++++++|+.+..
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g-------------~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~- 280 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-G-------------ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEM- 280 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH-
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-C-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHH-
Confidence 47899999999999999999875 3 3699999999842 133 6888999986532
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
..+.. ...+||+|++|++..... ..........+...+..+.++|+|||.+++..+..
T Consensus 281 -~~~~~--~~~~fD~Vi~dpP~~~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 281 -EKLQK--KGEKFDIVVLDPPAFVQH--EKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp -HHHHH--TTCCEEEEEECCCCSCSS--GGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred -HHHHh--hCCCCCEEEECCCCCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 11111 246899999997532211 11222233445678889999999999999877754
No 181
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.95 E-value=8.8e-10 Score=93.24 Aligned_cols=111 Identities=20% Similarity=0.215 Sum_probs=72.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--------CC---C---------------
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--------IE---G--------------- 94 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--------~~---~--------------- 94 (249)
++.+|||+|||+|.++..+++++.. +..+|+|+|+++... .. +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-----------~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-----------SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERF 119 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-----------GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-----------CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhc
Confidence 5679999999999999999887310 136899999997320 11 1
Q ss_pred --------------ce-------------EeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHH
Q 025715 95 --------------VI-------------QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLIL 147 (249)
Q Consensus 95 --------------v~-------------~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~ 147 (249)
++ +.++|+.+....... ....+||+|++|++......+..+ .......
T Consensus 120 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~~~~fD~Iv~npp~~~~~~~~~~--~~~~~~~ 194 (250)
T 1o9g_A 120 GKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAV---LAGSAPDVVLTDLPYGERTHWEGQ--VPGQPVA 194 (250)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHH---HTTCCCSEEEEECCGGGSSSSSSC--CCHHHHH
T ss_pred ccccchhhhhhhhhhhhhccccccccccceeecccccccccccc---cCCCCceEEEeCCCeecccccccc--ccccHHH
Confidence 55 888998874311000 023489999999754322111100 0123345
Q ss_pred HHHHHHHHhccCCCEEEEEEe
Q 025715 148 AGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 148 ~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.++..+.++|+|||.+++ +.
T Consensus 195 ~~l~~~~~~LkpgG~l~~-~~ 214 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAV-TD 214 (250)
T ss_dssp HHHHHHHHHSCTTCEEEE-EE
T ss_pred HHHHHHHHhcCCCcEEEE-eC
Confidence 678889999999999998 44
No 182
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.95 E-value=7.3e-10 Score=88.80 Aligned_cols=103 Identities=14% Similarity=0.068 Sum_probs=69.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..++++ + ..+|+++|+++.. .+ ++++++++|+.+...
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-------------MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 46789999999999999988764 2 3699999999742 12 368889999865321
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
.+. ...++||+|++|++... ...... . ..+ .+.++|+|||.+++.+...
T Consensus 109 --~~~--~~~~~fD~i~~~~~~~~-----~~~~~~---~-~~l-~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 109 --QFY--EEKLQFDLVLLDPPYAK-----QEIVSQ---L-EKM-LERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp --HHH--HTTCCEEEEEECCCGGG-----CCHHHH---H-HHH-HHTTCEEEEEEEEEEEETT
T ss_pred --HHH--hcCCCCCEEEECCCCCc-----hhHHHH---H-HHH-HHhcccCCCCEEEEEeCCc
Confidence 111 12468999999975321 111111 1 112 2378999999999876544
No 183
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.95 E-value=2.2e-09 Score=95.29 Aligned_cols=117 Identities=11% Similarity=0.029 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
++.+|||+|||+|.++..+++..+ ..+|+++|+++... -..++++.+|+.+.
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~-------------~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~----- 257 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSP-------------KIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE----- 257 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCT-------------TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT-----
T ss_pred CCCeEEEecCccCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc-----
Confidence 467999999999999999988753 46999999998421 11256778888653
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcCCCeeEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTF 189 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~f~~v~~ 189 (249)
..++||+|++++.+.. |.. .........+..+.++|||||.+++...........+ ...|..+..
T Consensus 258 -----~~~~fD~Iv~~~~~~~-g~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l---~~~f~~~~~ 322 (343)
T 2pjd_A 258 -----VKGRFDMIISNPPFHD-GMQ-----TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVL---DETFGFHEV 322 (343)
T ss_dssp -----CCSCEEEEEECCCCCS-SSH-----HHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHH---HHHHSCCEE
T ss_pred -----ccCCeeEEEECCCccc-Ccc-----CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHH---HHhcCceEE
Confidence 2468999999986542 110 1122345678999999999999999766555554443 334554444
No 184
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.95 E-value=1.8e-09 Score=95.94 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=70.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CC-CCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~-~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++. + ..+|+|+|++++. .+ ++++++++|+.+.+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 126 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-G-------------AKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-- 126 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-C-------------CCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc--
Confidence 57789999999999999988875 3 2699999999742 12 57889999998753
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv 164 (249)
++.++||+|+++...... .... ....++..+.++|||||.++
T Consensus 127 ------~~~~~~D~Ivs~~~~~~l--~~~~------~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 ------LPVEKVDVIISEWMGYFL--LFES------MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ------CSCSCEEEEEECCCBTTB--TTTC------HHHHHHHHHHHHEEEEEEEE
T ss_pred ------CCCCcEEEEEEcCchhhc--cCHH------HHHHHHHHHHhhcCCCcEEE
Confidence 345789999998632211 1111 12346777889999999998
No 185
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.95 E-value=6.3e-09 Score=89.98 Aligned_cols=121 Identities=16% Similarity=0.133 Sum_probs=82.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------------------CCCCceEe
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------------PIEGVIQV 98 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------------------~~~~v~~~ 98 (249)
.++.+|||+|||+|+++..++++ + ..+|++||+++.. ..++++++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-------------~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~ 139 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-------------VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT 139 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-------------CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-------------CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE
Confidence 35689999999999999998876 4 3699999998721 12467888
Q ss_pred ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHH-HHHHHHHHHHhccCCCEEEEEEecCC-C---H
Q 025715 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRGK-D---T 173 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~Lk~gG~lv~k~~~~~-~---~ 173 (249)
.+|..+. +. . .++||+|++|..... +. . ..+ ....+..+.++|+|||.+++...... . .
T Consensus 140 ~~D~~~~-----l~-~--~~~fD~Ii~d~~~~~-~~---~----~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~ 203 (281)
T 1mjf_A 140 IGDGFEF-----IK-N--NRGFDVIIADSTDPV-GP---A----KVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDEL 203 (281)
T ss_dssp ESCHHHH-----HH-H--CCCEEEEEEECCCCC-------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHH
T ss_pred ECchHHH-----hc-c--cCCeeEEEECCCCCC-Cc---c----hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHH
Confidence 8886432 22 2 468999999975321 11 0 011 13567788999999999998754332 2 3
Q ss_pred HHHHHHHhcCCCeeEEe
Q 025715 174 SLLYCQLKLFFPVVTFA 190 (249)
Q Consensus 174 ~~l~~~l~~~f~~v~~~ 190 (249)
..+...++..|..+..+
T Consensus 204 ~~~~~~l~~~f~~v~~~ 220 (281)
T 1mjf_A 204 ISAYKEMKKVFDRVYYY 220 (281)
T ss_dssp HHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHHHCCceEEE
Confidence 44556666678887764
No 186
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.95 E-value=5.8e-10 Score=98.98 Aligned_cols=101 Identities=20% Similarity=0.208 Sum_probs=75.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.+|.+|||+|||+|+++.. ++ + ..+|+|+|+++.+ .+ .+++++++|+.+.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-------------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~-- 255 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-------------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV-- 255 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-------------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC--
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh--
Confidence 5789999999999999998 75 2 3799999999832 13 4688999998763
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF 183 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~ 183 (249)
. .+||+|++|++... ...+..+.++|+|||.+++..+... ...+...+...
T Consensus 256 --------~-~~fD~Vi~dpP~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~ 306 (336)
T 2yx1_A 256 --------D-VKGNRVIMNLPKFA---------------HKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKK 306 (336)
T ss_dssp --------C-CCEEEEEECCTTTG---------------GGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHH
T ss_pred --------c-CCCcEEEECCcHhH---------------HHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHh
Confidence 1 68999999974321 1356778899999999998777655 45555555543
No 187
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.94 E-value=1.3e-09 Score=94.47 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=84.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C------CCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P------IEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~------~~~v~~~~gDi~~ 104 (249)
.++.+|||+|||+|+++..+++.. +..+|++||+++.. . .++++++.+|..+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-------------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 143 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH
Confidence 356899999999999999988653 24799999999731 1 2568888888754
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHH-HHHHHHHHHhccCCCEEEEEEecCC----CHHHHHHH
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI-LAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQ 179 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~-~~~l~~a~~~Lk~gG~lv~k~~~~~----~~~~l~~~ 179 (249)
. +. . ..++||+|++|..... +. . ..+. ...+..+.++|+|||.|++...... ....+...
T Consensus 144 ~-----l~-~-~~~~fD~Ii~d~~~~~-~~---~----~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~ 208 (283)
T 2i7c_A 144 F-----LE-N-VTNTYDVIIVDSSDPI-GP---A----ETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGY 208 (283)
T ss_dssp H-----HH-H-CCSCEEEEEEECCCTT-TG---G----GGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHH
T ss_pred H-----HH-h-CCCCceEEEEcCCCCC-Cc---c----hhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHH
Confidence 2 11 1 2468999999974221 11 1 0111 3578888999999999998754322 23456666
Q ss_pred HhcCCCeeEEe
Q 025715 180 LKLFFPVVTFA 190 (249)
Q Consensus 180 l~~~f~~v~~~ 190 (249)
++..|..+..+
T Consensus 209 l~~~F~~v~~~ 219 (283)
T 2i7c_A 209 AKKLFKKVEYA 219 (283)
T ss_dssp HHTTCSEEEEE
T ss_pred HHHHCCceEEE
Confidence 77789888654
No 188
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.94 E-value=2.6e-09 Score=90.69 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=70.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|..+..+++.++ +.++|+++|+++.. .+ .+++++.+|..+.
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~------------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-- 143 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIP------------EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV-- 143 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSC------------TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH--
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH--
Confidence 3568999999999999999998875 35899999999842 12 3578888987542
Q ss_pred HHHHHH-hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIR-HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~-~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+.. ....++||+|++|+... + ....+..+.++|||||.+++-
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~~~-------~-------~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDADKD-------N-------YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSCST-------T-------HHHHHHHHHHHBCTTCCEEEE
T ss_pred HHHHHhccCCCCCEEEEEEcCchH-------H-------HHHHHHHHHHhCCCCeEEEEe
Confidence 111110 00146899999986421 1 124677888999999999974
No 189
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.93 E-value=1.4e-08 Score=85.76 Aligned_cols=132 Identities=12% Similarity=0.103 Sum_probs=83.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~~~ 108 (249)
++.+|||+|||+|.++..++++.+ ..+|+|+|+++.. .+. +++++++|+.+.-
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 129 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-------------GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL-- 129 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS--
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhh--
Confidence 577999999999999999988764 4799999999732 133 4889999976520
Q ss_pred HHHHHhcC---CCcccEEEeCCCCCCCCC--CC-----c---C-H-H------------HHHHHHHHHHHHHHHhccCCC
Q 025715 109 EVVIRHFD---GCKADLVVCDGAPDVTGL--HD-----M---D-E-F------------VQSQLILAGLTVVTHVLKEGG 161 (249)
Q Consensus 109 ~~i~~~~~---~~~~DlVlsD~~~~~~g~--~~-----~---~-~-~------------~~~~l~~~~l~~a~~~Lk~gG 161 (249)
.+.+. +++||+|++|++....+. .. . . . . ....++...+..+.++|+++|
T Consensus 130 ---~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g 206 (254)
T 2h00_A 130 ---MDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLR 206 (254)
T ss_dssp ---TTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBS
T ss_pred ---hhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceE
Confidence 00122 258999999975432220 00 0 0 0 0 012233445556677889999
Q ss_pred EEEEEEecCCCHHHHHHHHhcC-CCeeEEe
Q 025715 162 KFIAKIFRGKDTSLLYCQLKLF-FPVVTFA 190 (249)
Q Consensus 162 ~lv~k~~~~~~~~~l~~~l~~~-f~~v~~~ 190 (249)
.+.+.........++...++.. |..|.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 207 WYSCMLGKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp CEEEEESSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred EEEECCCChhHHHHHHHHHHHcCCCceEEE
Confidence 8876554444446666666654 8877764
No 190
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.93 E-value=1.2e-09 Score=91.52 Aligned_cols=100 Identities=14% Similarity=-0.000 Sum_probs=68.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCC--C-------C------CCCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP--M-------A------PIEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~--~-------~------~~~~v~~~~gDi~~ 104 (249)
+++.+|||+|||+|.++..++++. +...|+|+|+++ + + .++++.++++|+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~-------------~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND-------------QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC-------------TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC-------------CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 678999999999999999998654 357899999994 2 1 13578889999877
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
.+. .+. ..+|.|.++..... . ...........+..+.++|||||.|++
T Consensus 90 l~~------~~~-d~v~~i~~~~~~~~-----~-~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 90 LPF------ELK-NIADSISILFPWGT-----L-LEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp CCG------GGT-TCEEEEEEESCCHH-----H-HHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hhh------hcc-CeEEEEEEeCCCcH-----H-hhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 531 112 46777776542110 0 000000013468889999999999998
No 191
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.93 E-value=4.1e-09 Score=91.18 Aligned_cols=108 Identities=11% Similarity=0.049 Sum_probs=65.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeE--EEecCCCCC------------CCCCceE--eecCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLI--VAIDLQPMA------------PIEGVIQ--VQGDIT 103 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~v--vavDi~~~~------------~~~~v~~--~~gDi~ 103 (249)
.++.+|||+|||+|.++..++..+... .+...| +++|.++.. .++++.+ .++|+.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~---------~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~ 121 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQ---------YPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS 121 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHH---------STTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhh---------CCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh
Confidence 567899999999999887554433100 013444 999999731 1234433 233332
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+.. ......+.+++||+|++.....+. .+. ..++..+.++|||||.|++....
T Consensus 122 ~~~--~~~~~~~~~~~fD~V~~~~~l~~~----~d~-------~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 122 EYQ--SRMLEKKELQKWDFIHMIQMLYYV----KDI-------PATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHH--HHHHTTTCCCCEEEEEEESCGGGC----SCH-------HHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhh--hhhccccCCCceeEEEEeeeeeec----CCH-------HHHHHHHHHHcCCCcEEEEEEec
Confidence 110 000001346789999997654432 122 25788899999999999986543
No 192
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.93 E-value=2.6e-09 Score=90.22 Aligned_cols=126 Identities=13% Similarity=0.111 Sum_probs=81.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CCCC-----------------
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEG----------------- 94 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~~~----------------- 94 (249)
.++.+|||+|||+|.++..++.... ..|+|+|+++.. ...+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--------------TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEG 120 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--------------EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--------------CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccc
Confidence 4678999999999999888775421 489999999732 0111
Q ss_pred ---------------c-eEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcc
Q 025715 95 ---------------V-IQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (249)
Q Consensus 95 ---------------v-~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk 158 (249)
+ ++.++|+.+.... .....++||+|++........ .. ......++..+.++||
T Consensus 121 ~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~----~~~~~~~fD~v~~~~~l~~~~---~~----~~~~~~~l~~~~~~Lk 189 (265)
T 2i62_A 121 NRMKGPEKEEKLRRAIKQVLKCDVTQSQPL----GGVSLPPADCLLSTLCLDAAC---PD----LPAYRTALRNLGSLLK 189 (265)
T ss_dssp TCSCHHHHHHHHHHHEEEEEECCTTSSSTT----TTCCCCCEEEEEEESCHHHHC---SS----HHHHHHHHHHHHTTEE
T ss_pred cccchHHHHHHhhhhheeEEEeeeccCCCC----CccccCCccEEEEhhhhhhhc---CC----hHHHHHHHHHHHhhCC
Confidence 6 7889999875310 001227899999975432100 01 1123467888899999
Q ss_pred CCCEEEEEEec---------------CCCHHHHHHHHhcC-CCeeEEe
Q 025715 159 EGGKFIAKIFR---------------GKDTSLLYCQLKLF-FPVVTFA 190 (249)
Q Consensus 159 ~gG~lv~k~~~---------------~~~~~~l~~~l~~~-f~~v~~~ 190 (249)
|||.|++.... .....++...+... |..+.+.
T Consensus 190 pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 190 PGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 99999986532 12344676766654 7766654
No 193
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.92 E-value=3.9e-09 Score=91.49 Aligned_cols=96 Identities=21% Similarity=0.202 Sum_probs=70.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CC-----CCceEeecCCCChh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI-----EGVIQVQGDITNAR 106 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~-----~~v~~~~gDi~~~~ 106 (249)
++.+|||+|||+|.++..++++ + ..|+|+|+++.. .. .+++++++|+.+.+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL-G--------------WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT-T--------------CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 3459999999999999999875 3 689999999732 11 46889999998753
Q ss_pred hHHHHHHhcCCCcccEEEeCC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 107 TAEVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+ +++||+|++.. .... .+. .....++..+.++|||||.|++.++.
T Consensus 147 --------~-~~~fD~v~~~~~~~~~-----~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 147 --------L-DKRFGTVVISSGSINE-----LDE----ADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp --------C-SCCEEEEEECHHHHTT-----SCH----HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------c-CCCcCEEEECCccccc-----CCH----HHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 2 47899998642 1211 121 11246788899999999999998764
No 194
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.92 E-value=2.1e-09 Score=88.46 Aligned_cols=92 Identities=21% Similarity=0.197 Sum_probs=69.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++..+ +..+|+++|+++.. .++++++.++|+....
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 141 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVG------------EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY-- 141 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC--
T ss_pred CCCCEEEEECCCccHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC--
Confidence 5788999999999999999998874 34799999999732 2356888889885421
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
...++||+|+++...... . ..+.++|||||.+++.+.
T Consensus 142 ------~~~~~fD~v~~~~~~~~~-----~------------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 142 ------EPLAPYDRIYTTAAGPKI-----P------------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp ------GGGCCEEEEEESSBBSSC-----C------------HHHHHTEEEEEEEEEEES
T ss_pred ------CCCCCeeEEEECCchHHH-----H------------HHHHHHcCCCcEEEEEEC
Confidence 013579999998754321 1 256789999999999654
No 195
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.91 E-value=1.9e-09 Score=97.61 Aligned_cols=110 Identities=17% Similarity=0.116 Sum_probs=74.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-C-CceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-E-GVIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~-~v~~~~gDi~~~~ 106 (249)
.++.+|||+|||+|+++..++... ..+|+|+|+++.+ .+ . +++++++|+.+..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--------------~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~ 284 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--------------CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLL 284 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 478899999999999999998752 2699999999732 23 4 6788999986532
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
..+.. .+.+||+|++|++.......... .....+...+..+.++|+|||.+++....
T Consensus 285 --~~~~~--~~~~fD~Ii~dpP~~~~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 285 --RTYRD--RGEKFDVIVMDPPKFVENKSQLM--GACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp --HHHHH--TTCCEEEEEECCSSTTTCSSSSS--CCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --HHHHh--cCCCCCEEEECCCCCCCChhHHH--HHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 11111 24689999999753211111100 00112345678889999999999987764
No 196
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.90 E-value=5.1e-09 Score=94.23 Aligned_cols=95 Identities=15% Similarity=0.109 Sum_probs=69.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------C-CCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------I-EGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~-~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++. + ..+|+|+|++++.. + .+++++++|+.+..
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g-------------~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 125 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-G-------------ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS-- 125 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-T-------------CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC--
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-C-------------CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC--
Confidence 57889999999999999999876 3 25999999995421 2 34889999997753
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
++ ++||+|+++......... .. ...++..+.++|||||.|++
T Consensus 126 ------~~-~~~D~Iv~~~~~~~l~~e-~~-------~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 126 ------LP-EKVDVIISEWMGYFLLRE-SM-------FDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp ------CS-SCEEEEEECCCBTTBTTT-CT-------HHHHHHHHHHHEEEEEEEES
T ss_pred ------cC-CcceEEEEcChhhcccch-HH-------HHHHHHHHHhhCCCCeEEEE
Confidence 23 789999998643322110 11 23467777899999999985
No 197
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.90 E-value=1.3e-09 Score=93.89 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=71.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------------CCCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------------~~~~v~~~~gDi~~ 104 (249)
.++.+|||+|||+|.++..+++. + .+|+|+|+++.. ...++.+..+|+.+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE-G--------------FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred cCCCEEEEecCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 46789999999999999999875 3 599999999732 01356778888876
Q ss_pred hhhHHHHHHhcCCCcccEEEeCC-CCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+. +.+..++||+|++.+ ..........+. +....++..+.++|||||.|++.+.
T Consensus 121 ~~~-----~~~~~~~fD~V~~~g~~l~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 121 LDK-----DVPAGDGFDAVICLGNSFAHLPDSKGDQ----SEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHH-----HSCCTTCEEEEEECTTCGGGSCCSSSSS----HHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Ccc-----ccccCCCeEEEEEcChHHhhcCccccCH----HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 431 113567999999973 332211100000 1124578899999999999998654
No 198
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.90 E-value=5.2e-09 Score=94.26 Aligned_cols=93 Identities=22% Similarity=0.263 Sum_probs=66.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------C-CCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------I-EGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~-~~v~~~~gDi~~~~~~~ 109 (249)
+|.+|||+|||+|.++..+++. + ..+|+|||.+++.. + ..++++++|+.+.+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-G-------------A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--- 145 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-G-------------ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVE--- 145 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC---
T ss_pred CCCEEEEeCCCccHHHHHHHHh-C-------------CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeec---
Confidence 6889999999999999877764 3 36899999998641 2 35889999998754
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv 164 (249)
++ ++||+|+|...-... .... ++...+....++|||||.++
T Consensus 146 -----lp-e~~DvivsE~~~~~l-~~e~-------~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 -----LP-EQVDAIVSEWMGYGL-LHES-------MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp -----CS-SCEEEEECCCCBTTB-TTTC-------SHHHHHHHHHHHEEEEEEEE
T ss_pred -----CC-ccccEEEeecccccc-cccc-------hhhhHHHHHHhhCCCCceEC
Confidence 23 689999997532111 1100 12345566678999999987
No 199
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.90 E-value=2.2e-09 Score=93.70 Aligned_cols=106 Identities=16% Similarity=0.096 Sum_probs=73.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------------CCCCceEeecC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------PIEGVIQVQGD 101 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------------~~~~v~~~~gD 101 (249)
.++.+|||+|||+|.++..+++.. ...|+++|+++.. ...+++++++|
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGR--------------INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHhcC--------------CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 467899999999999999888742 3699999999732 11257889999
Q ss_pred CCChhhHHHHHHhcC--CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 102 ITNARTAEVVIRHFD--GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 102 i~~~~~~~~i~~~~~--~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
+.+.+.. ..+. .++||+|++..+..+.- .+. .....++..+.++|||||.|++.++..
T Consensus 99 ~~~~~~~----~~~~~~~~~fD~V~~~~~l~~~~---~~~----~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 99 SSKELLI----DKFRDPQMCFDICSCQFVCHYSF---ESY----EQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTTSCST----TTCSSTTCCEEEEEEETCGGGGG---GSH----HHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ccccchh----hhcccCCCCEEEEEEecchhhcc---CCH----HHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 9875310 0122 34899999987543310 111 112467888999999999999977643
No 200
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.89 E-value=3.3e-09 Score=88.04 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=70.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+ .+++++++|+.+.
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-- 133 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALP------------ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET-- 133 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH--
Confidence 4678999999999999999998764 35799999999842 12 4688889987542
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+...-..++||+|++|+... + ....+..+.++|+|||.+++.
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~~~-------~-------~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDADKE-------N-------CSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSCST-------T-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhcCCCCCccEEEECCCHH-------H-------HHHHHHHHHHHcCCCeEEEEE
Confidence 11221100115899999986411 1 124677888999999999984
No 201
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.89 E-value=3e-09 Score=94.77 Aligned_cols=95 Identities=16% Similarity=0.212 Sum_probs=69.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CC-CCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~-~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++. + ..+|+|+|++++. .+ ++++++.+|+.+.+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-- 112 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-G-------------ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-- 112 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-C-------------CCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC--
Confidence 47789999999999999988875 3 3699999999742 12 46889999998743
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
++ ++||+|++++....... .. ....+..+.++|||||.+++.
T Consensus 113 ------~~-~~~D~Ivs~~~~~~~~~--~~-------~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 ------LP-EQVDIIISEPMGYMLFN--ER-------MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ------CS-SCEEEEEECCCBTTBTT--TS-------HHHHHHHGGGGEEEEEEEESC
T ss_pred ------CC-CceeEEEEeCchhcCCh--HH-------HHHHHHHHHhhcCCCeEEEEe
Confidence 22 58999999864322111 11 123456778999999999854
No 202
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.88 E-value=5.5e-09 Score=87.21 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=71.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ .++|+++|+++.. .+ .+++++++|+.+...
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 119 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP-------------EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE 119 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT-------------TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH
Confidence 4778999999999999999998863 4799999999732 12 358889999876311
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
....+++||+|++|.... + ....+..+.++|+|||.+++.
T Consensus 120 -----~~~~~~~fD~I~~~~~~~-------~-------~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 120 -----KLELYPLFDVLFIDAAKG-------Q-------YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp -----HHTTSCCEEEEEEEGGGS-------C-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred -----hcccCCCccEEEECCCHH-------H-------HHHHHHHHHHHcCCCeEEEEE
Confidence 111136899999986421 1 134678889999999999986
No 203
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.88 E-value=4.5e-09 Score=92.84 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=68.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CC-CCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~-~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++. + ..+|+|+|++++. .+ .+++++++|+.+.+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 100 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G-------------AKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-- 100 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C-------------CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C-------------CCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc--
Confidence 46789999999999999988875 3 3699999999642 12 35888999998753
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv 164 (249)
++.++||+|+++...... .... ....++..+.++|||||.++
T Consensus 101 ------~~~~~~D~Ivs~~~~~~l--~~~~------~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 ------LPFPKVDIIISEWMGYFL--LYES------MMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ------CSSSCEEEEEECCCBTTB--STTC------CHHHHHHHHHHHEEEEEEEE
T ss_pred ------CCCCcccEEEEeCchhhc--ccHH------HHHHHHHHHHhhcCCCeEEE
Confidence 344789999998532211 1111 11245677789999999997
No 204
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.88 E-value=3.6e-09 Score=92.67 Aligned_cols=124 Identities=15% Similarity=0.149 Sum_probs=82.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C------CCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P------IEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~------~~~v~~~~gDi~~ 104 (249)
.++.+|||||||+|.++..++++. +..+|++||+++.. . .++++++.+|..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 160 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-------------SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 356899999999999999988753 24799999999731 1 2468888888754
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC----HHHHHHHH
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD----TSLLYCQL 180 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~----~~~l~~~l 180 (249)
. +. . ..++||+|++|..... +. .. .......+..+.++|+|||.|++....... ...+...+
T Consensus 161 ~-----l~-~-~~~~fD~Ii~d~~~~~-~~---~~---~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 226 (304)
T 2o07_A 161 F-----MK-Q-NQDAFDVIITDSSDPM-GP---AE---SLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFC 226 (304)
T ss_dssp H-----HH-T-CSSCEEEEEEECC------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHH
T ss_pred H-----Hh-h-CCCCceEEEECCCCCC-Cc---ch---hhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHH
Confidence 2 11 1 3468999999974221 10 00 001234678889999999999987643322 34555667
Q ss_pred hcCCCeeEEe
Q 025715 181 KLFFPVVTFA 190 (249)
Q Consensus 181 ~~~f~~v~~~ 190 (249)
+..|..+.+.
T Consensus 227 ~~~f~~v~~~ 236 (304)
T 2o07_A 227 QSLFPVVAYA 236 (304)
T ss_dssp HHHCSEEEEE
T ss_pred HHhCCCceeE
Confidence 7789888765
No 205
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.87 E-value=4.5e-09 Score=88.49 Aligned_cols=99 Identities=15% Similarity=0.136 Sum_probs=70.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|..+..+++.++ +.++|+++|+++.. .+ .+++++.+|..+.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~-- 134 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIP------------DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA-- 134 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSC------------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4668999999999999999999875 35899999999732 12 2578888987542
Q ss_pred HHHHHHh-cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRH-FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~-~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+... ...++||+|++|.... + ....+..+.++|+|||.+++-
T Consensus 135 l~~l~~~~~~~~~fD~I~~d~~~~-------~-------~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 135 LDNLLQGQESEGSYDFGFVDADKP-------N-------YIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HHHHHHSTTCTTCEEEEEECSCGG-------G-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhccCCCCCcCEEEECCchH-------H-------HHHHHHHHHHhcCCCeEEEEe
Confidence 1111110 0146899999986321 1 134677888999999999985
No 206
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.87 E-value=1.8e-08 Score=90.30 Aligned_cols=107 Identities=21% Similarity=0.307 Sum_probs=77.6
Q ss_pred HHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC----CCCCCceEeecCCCC
Q 025715 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITN 104 (249)
Q Consensus 29 L~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~----~~~~~v~~~~gDi~~ 104 (249)
..++.+.+.-+.++.+|||+|||+|.++..++++.+ ..+++++|+..+ ...++++++.+|+.+
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~ 263 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYP-------------LIKGINFDLPQVIENAPPLSGIEHVGGDMFA 263 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCTTT
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCC-------------CCeEEEeChHHHHHhhhhcCCCEEEeCCccc
Confidence 345666665456778999999999999999998864 578999998222 124679999999976
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+ ++ . +|+|++...... .+.. .+..++..+.++|+|||.+++..+
T Consensus 264 ~---------~~-~-~D~v~~~~~lh~-----~~d~----~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 264 S---------VP-Q-GDAMILKAVCHN-----WSDE----KCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp C---------CC-C-EEEEEEESSGGG-----SCHH----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C---------CC-C-CCEEEEeccccc-----CCHH----HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 2 23 2 999998754321 2221 123578889999999999998644
No 207
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.87 E-value=1.1e-09 Score=91.13 Aligned_cols=99 Identities=17% Similarity=0.187 Sum_probs=70.5
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------C-----CCCceEeecCC
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~-----~~~v~~~~gDi 102 (249)
++++.+|||+|||+|.++..+++..+...+ ...++|+++|+++.. . ..+++++.+|+
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~-------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 154 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGV-------DADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG 154 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCC-------CTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccC-------CccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc
Confidence 468899999999999999999987641000 002599999999732 1 35788889998
Q ss_pred CChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
.+... ..++||+|+++..... ....+.+.|||||.+++.+..
T Consensus 155 ~~~~~--------~~~~fD~I~~~~~~~~-----------------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 155 RKGYP--------PNAPYNAIHVGAAAPD-----------------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGCCG--------GGCSEEEEEECSCBSS-----------------CCHHHHHTEEEEEEEEEEESC
T ss_pred ccCCC--------cCCCccEEEECCchHH-----------------HHHHHHHHhcCCCEEEEEEec
Confidence 75210 1257999999875432 123567899999999997653
No 208
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.85 E-value=2.2e-09 Score=89.10 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=71.2
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------C-----CCCceEeecCC
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~-----~~~v~~~~gDi 102 (249)
++++.+|||+|||+|.++..+++..+.. .++.++|+++|+++.. . ..+++++.+|+
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~--------~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVL--------ENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI 149 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTT--------TCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhccc--------CCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh
Confidence 4678999999999999999999875300 0024699999999732 1 34788999998
Q ss_pred CChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
.+.... .. ...++||+|+++..... .+..+.++|+|||.+++.+..
T Consensus 150 ~~~~~~-~~---~~~~~fD~I~~~~~~~~-----------------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 150 YQVNEE-EK---KELGLFDAIHVGASASE-----------------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GGCCHH-HH---HHHCCEEEEEECSBBSS-----------------CCHHHHHHEEEEEEEEEEEEE
T ss_pred Hhcccc-cC---ccCCCcCEEEECCchHH-----------------HHHHHHHhcCCCcEEEEEEcc
Confidence 763210 00 11357999999875431 134567899999999996543
No 209
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.85 E-value=1.9e-09 Score=88.68 Aligned_cols=93 Identities=18% Similarity=0.048 Sum_probs=68.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+ .+++++++|..+.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 120 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAIS------------ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-- 120 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH--
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH--
Confidence 3668999999999999999998764 35799999999732 12 2578888887542
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+ .+ ||+|++|.... + ....+..+.++|+|||.+++.
T Consensus 121 ----~~~~-~~-fD~v~~~~~~~-------~-------~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 121 ----AAGQ-RD-IDILFMDCDVF-------N-------GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ----HTTC-CS-EEEEEEETTTS-------C-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred ----hccC-CC-CCEEEEcCChh-------h-------hHHHHHHHHHhcCCCeEEEEE
Confidence 1122 35 99999985311 1 124678889999999999974
No 210
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.85 E-value=1.4e-08 Score=91.19 Aligned_cols=108 Identities=17% Similarity=-0.014 Sum_probs=75.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCC-hhhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITN-ARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~-~~~~ 108 (249)
++.+|||+| |+|.++..++... +..+|+++|+++.. .+.+++++++|+.+ .+.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~-------------~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~- 236 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG-------------LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPD- 236 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT-------------CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCT-
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchh-
Confidence 578999999 9999999998753 24799999999732 13478999999987 220
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEE-EEEEec-CCCH---HHHHHHHh
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKF-IAKIFR-GKDT---SLLYCQLK 181 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~l-v~k~~~-~~~~---~~l~~~l~ 181 (249)
...++||+|++|+++... . ....+..+.++|+|||++ ++.+.. .... ..+...+.
T Consensus 237 ------~~~~~fD~Vi~~~p~~~~-----------~-~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (373)
T 2qm3_A 237 ------YALHKFDTFITDPPETLE-----------A-IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLL 296 (373)
T ss_dssp ------TTSSCBSEEEECCCSSHH-----------H-HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred ------hccCCccEEEECCCCchH-----------H-HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHH
Confidence 013589999999753221 1 256788899999999954 554443 2444 44555554
No 211
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.85 E-value=1.5e-10 Score=97.12 Aligned_cols=90 Identities=20% Similarity=0.149 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~~ 108 (249)
++.+|||+|||+|.++..+++. + .+|+|+|+++.. .+ ++++++++|+.+..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-G--------------MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-- 140 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--
T ss_pred CCCEEEECccccCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--
Confidence 7899999999999999999875 2 699999999842 12 46889999986642
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
...+||+|++|++....+.. . ..+..+.++|+|||.+++
T Consensus 141 -------~~~~~D~v~~~~~~~~~~~~--~---------~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 141 -------SFLKADVVFLSPPWGGPDYA--T---------AETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp -------GGCCCSEEEECCCCSSGGGG--G---------SSSBCTTTSCSSCHHHHH
T ss_pred -------ccCCCCEEEECCCcCCcchh--h---------hHHHHHHhhcCCcceeHH
Confidence 24689999999865432211 0 012234567777777554
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.85 E-value=8.5e-09 Score=90.74 Aligned_cols=123 Identities=18% Similarity=0.179 Sum_probs=81.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C------CCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P------IEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~------~~~v~~~~gDi~~ 104 (249)
.++.+|||+|||+|+.+..+++.. +..+|+++|+++.. . .++++++.+|+.+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~ 173 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-------------SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE 173 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-------------TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH
Confidence 355799999999999999988753 24799999999731 1 2467888888754
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHH-HHHHHHHHHhccCCCEEEEEEecCC----CHHHHHHH
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI-LAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQ 179 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~-~~~l~~a~~~Lk~gG~lv~k~~~~~----~~~~l~~~ 179 (249)
. +. . ..++||+|++|..... + .. ..+. ...+..+.++|+|||.+++..-... ....+...
T Consensus 174 ~-----l~-~-~~~~fD~Ii~d~~~~~-~---~~----~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 238 (314)
T 2b2c_A 174 F-----LK-N-HKNEFDVIITDSSDPV-G---PA----ESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAF 238 (314)
T ss_dssp H-----HH-H-CTTCEEEEEECCC---------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHH
T ss_pred H-----HH-h-cCCCceEEEEcCCCCC-C---cc----hhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHH
Confidence 2 11 1 3468999999974211 1 00 1122 4678889999999999998653222 13345566
Q ss_pred HhcCCCeeEEe
Q 025715 180 LKLFFPVVTFA 190 (249)
Q Consensus 180 l~~~f~~v~~~ 190 (249)
++..|..+.++
T Consensus 239 l~~vF~~v~~~ 249 (314)
T 2b2c_A 239 NRKIFPAVTYA 249 (314)
T ss_dssp HHHHCSEEEEE
T ss_pred HHHHCCcceEE
Confidence 77779887654
No 213
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.85 E-value=3.3e-09 Score=88.16 Aligned_cols=89 Identities=18% Similarity=0.196 Sum_probs=66.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++..+++.. .+|+++|+++.. ...+++++++|+.+..
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~---- 129 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV---------------DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY---- 129 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC----
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc---------------CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc----
Confidence 578899999999999999998763 599999999732 1126888999987521
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
...++||+|+++..... .. ..+.++|+|||.+++.+.
T Consensus 130 ----~~~~~fD~v~~~~~~~~-----~~------------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 130 ----EEEKPYDRVVVWATAPT-----LL------------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp ----GGGCCEEEEEESSBBSS-----CC------------HHHHHTEEEEEEEEEEEC
T ss_pred ----ccCCCccEEEECCcHHH-----HH------------HHHHHHcCCCcEEEEEEc
Confidence 02368999999875432 11 236789999999999654
No 214
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.83 E-value=1.3e-08 Score=87.29 Aligned_cols=103 Identities=11% Similarity=0.023 Sum_probs=66.1
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------CCCceEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~~~v~~~~gDi~~~~~~~~i~ 112 (249)
+.++.+|||+|||+|.++..++++ + .+|+|+|+++... .... .+++|+.+.... ..
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~-g--------------~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~--~~ 104 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALER-G--------------ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAE--IP 104 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSC--CC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhc-C--------------CEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccc--cc
Confidence 367899999999999999999875 2 6999999998320 1111 234444432210 00
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecC
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~ 170 (249)
..+ .++||+|+++...... ... -...++..+.++| |||.+++.+..+
T Consensus 105 ~~~-~~~fD~Vv~~~~l~~~-----~~~----~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 105 KEL-AGHFDFVLNDRLINRF-----TTE----EARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp GGG-TTCCSEEEEESCGGGS-----CHH----HHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred ccc-CCCccEEEEhhhhHhC-----CHH----HHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 011 3689999998754321 111 1234677778899 999999876544
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.83 E-value=5.3e-09 Score=92.82 Aligned_cols=120 Identities=17% Similarity=0.135 Sum_probs=80.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------C--CCCceEeecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------P--IEGVIQVQGDITN 104 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------------~--~~~v~~~~gDi~~ 104 (249)
.++.+|||+|||+|.++..++++.+ ..+|++||+++.. . .++++++.+|+.+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-------------~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~ 185 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-------------IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA 185 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-------------CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-------------CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH
Confidence 4568999999999999999887542 4799999999731 1 2468889998754
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHH-HHHHHHHHHHhccCCCEEEEEEecCCC----HHHHHHH
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRGKD----TSLLYCQ 179 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~Lk~gG~lv~k~~~~~~----~~~l~~~ 179 (249)
. ...+..++||+|++|..... +. .+ .+ ....+..+.++|+|||.|++..-.... ...+...
T Consensus 186 ~------l~~~~~~~fDlIi~d~~~p~-~~--~~-----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 251 (334)
T 1xj5_A 186 F------LKNAAEGSYDAVIVDSSDPI-GP--AK-----ELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSN 251 (334)
T ss_dssp H------HHTSCTTCEEEEEECCCCTT-SG--GG-----GGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHH
T ss_pred H------HHhccCCCccEEEECCCCcc-Cc--ch-----hhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHH
Confidence 2 11233468999999974211 11 01 01 135788899999999999986332221 2344555
Q ss_pred HhcCCCe
Q 025715 180 LKLFFPV 186 (249)
Q Consensus 180 l~~~f~~ 186 (249)
++..|..
T Consensus 252 l~~~F~~ 258 (334)
T 1xj5_A 252 CREIFKG 258 (334)
T ss_dssp HHHHCSS
T ss_pred HHHhCcc
Confidence 6667874
No 216
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.83 E-value=7e-08 Score=82.72 Aligned_cols=109 Identities=17% Similarity=0.096 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------C---------CCCceEeecCCCCh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P---------IEGVIQVQGDITNA 105 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~---------~~~v~~~~gDi~~~ 105 (249)
.+.+|||+|||+|+.+..+++. + .+|++||+++.. . .++++++.+|..+.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--------------~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~ 136 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--------------THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD 136 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--------------CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--------------CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH
Confidence 4579999999999999887765 3 699999998721 1 13577788887652
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC-C---HHHHHHHHh
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-D---TSLLYCQLK 181 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~-~---~~~l~~~l~ 181 (249)
+ ++||+|++|... .. ..+..+.+.|+|||.|++....+. . ...+...++
T Consensus 137 ---------~--~~fD~Ii~d~~d--------p~--------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~ 189 (262)
T 2cmg_A 137 ---------I--KKYDLIFCLQEP--------DI--------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMG 189 (262)
T ss_dssp ---------C--CCEEEEEESSCC--------CH--------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHH
T ss_pred ---------H--hhCCEEEECCCC--------hH--------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHH
Confidence 1 579999999521 11 157788999999999998754432 2 344556677
Q ss_pred cCCCeeEEec
Q 025715 182 LFFPVVTFAK 191 (249)
Q Consensus 182 ~~f~~v~~~k 191 (249)
..|..+..+.
T Consensus 190 ~~F~~~~~~~ 199 (262)
T 2cmg_A 190 GVFSVAMPFV 199 (262)
T ss_dssp TTCSEEEEEC
T ss_pred HhCCceEEEE
Confidence 7898887653
No 217
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.82 E-value=6.4e-09 Score=87.27 Aligned_cols=100 Identities=22% Similarity=0.292 Sum_probs=70.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+. +++++.+|+.+.
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-- 124 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALP------------EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET-- 124 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSC------------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH--
Confidence 4678999999999999999998874 35799999999732 122 378888887542
Q ss_pred HHHHHH---------hcCC--CcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 108 AEVVIR---------HFDG--CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 108 ~~~i~~---------~~~~--~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
...+.. .++. ++||+|+++... .. ....+..+.++|+|||.+++..
T Consensus 125 ~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~--------~~------~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 125 LQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK--------EN------YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG--------GG------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHhhcccccccccccCCCCCcCEEEEeCCH--------HH------HHHHHHHHHHHcCCCeEEEEEc
Confidence 111111 1222 689999998531 11 1246778899999999999864
No 218
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.81 E-value=5.8e-09 Score=88.58 Aligned_cols=96 Identities=20% Similarity=0.170 Sum_probs=69.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------CCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+++. + ..|+++|+++... ..+ .++++|+.+.+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~------- 109 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER-G--------------FEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLP------- 109 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT-T--------------CEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCC-------
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc-C--------------CeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCC-------
Confidence 47789999999999999998865 3 5899999997321 122 27788887643
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+.+++||+|++....... ..+ ...++..+.++|||||.+++.+..
T Consensus 110 -~~~~~fD~v~~~~~~~~~---~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 110 -FPSGAFEAVLALGDVLSY---VEN-------KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp -SCTTCEEEEEECSSHHHH---CSC-------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -CCCCCEEEEEEcchhhhc---ccc-------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 345789999986421100 011 235788889999999999997764
No 219
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.80 E-value=4.3e-09 Score=88.10 Aligned_cols=90 Identities=17% Similarity=0.249 Sum_probs=66.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++..+ .+|+++|+++.. .+.++++..+|+...
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--- 152 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK--------------TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG--- 152 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC--------------SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccC---
Confidence 5788999999999999999998763 689999999732 235688889997321
Q ss_pred HHHHHhcC-CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 109 EVVIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 109 ~~i~~~~~-~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
+. ...||+|+++..... .. ..+.+.|+|||.+++.+..
T Consensus 153 ------~~~~~~fD~Ii~~~~~~~-----~~------------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 153 ------FPPKAPYDVIIVTAGAPK-----IP------------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp ------CGGGCCEEEEEECSBBSS-----CC------------HHHHHTEEEEEEEEEEECS
T ss_pred ------CCCCCCccEEEECCcHHH-----HH------------HHHHHhcCCCcEEEEEEec
Confidence 11 235999999865432 11 2457899999999996643
No 220
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.79 E-value=1.2e-07 Score=83.13 Aligned_cols=108 Identities=18% Similarity=0.141 Sum_probs=76.2
Q ss_pred HhhhhhcCc-ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CC-CCceE
Q 025715 30 LQIDEEFNI-FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQ 97 (249)
Q Consensus 30 ~ei~~~~~~-~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~-~~v~~ 97 (249)
.++.+.+.+ +.++.+|||+|||+|.++..++++.+ ..+++++|++.+. .+ .++++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~ 219 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNP-------------NAEIFGVDWASVLEVAKENARIQGVASRYHT 219 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEECHHHHHHHHHHHHHHTCGGGEEE
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCC-------------CCeEEEEecHHHHHHHHHHHHhcCCCcceEE
Confidence 344555553 25778999999999999999998864 4799999998321 12 25889
Q ss_pred eecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 98 ~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+.+|+.+.+ ++ ..||+|++...+.. .+.. ....++..+.++|+|||.+++..+
T Consensus 220 ~~~d~~~~~--------~~-~~~D~v~~~~~l~~-----~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 220 IAGSAFEVD--------YG-NDYDLVLLPNFLHH-----FDVA----TCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp EESCTTTSC--------CC-SCEEEEEEESCGGG-----SCHH----HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EecccccCC--------CC-CCCcEEEEcchhcc-----CCHH----HHHHHHHHHHHhCCCCcEEEEEee
Confidence 999998743 23 35999998654322 1211 124578888999999999988655
No 221
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.79 E-value=4.7e-09 Score=87.99 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=69.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++.. .+ .+++++.+|+.+.
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-- 136 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLP------------PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT-- 136 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH--
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4678999999999999999998764 35799999999832 12 3578888887542
Q ss_pred HHHHHHhcCC--CcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDG--CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~--~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
...+. ..+ ++||+|++|.... + ....+..+.++|+|||.+++.
T Consensus 137 l~~l~--~~~~~~~fD~V~~d~~~~-------~-------~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 137 LEQLT--QGKPLPEFDLIFIDADKR-------N-------YPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp HHHHH--TSSSCCCEEEEEECSCGG-------G-------HHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHH--hcCCCCCcCEEEECCCHH-------H-------HHHHHHHHHHHcCCCeEEEEe
Confidence 11111 112 6899999986411 1 124677889999999999985
No 222
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.79 E-value=1e-08 Score=90.93 Aligned_cols=121 Identities=13% Similarity=0.007 Sum_probs=79.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|+++..++++++... +....++|+|+++.. .+ ++.+.++|.....
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~--------~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~-- 197 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKG--------DVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL-- 197 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTS--------SCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC--
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhc--------CCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc--
Confidence 3578999999999999999988875100 012689999999842 12 4678899986632
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHH----------HHHHHHHHHHHHHHhccCCCEEEEEEe----cCCCHH
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFV----------QSQLILAGLTVVTHVLKEGGKFIAKIF----RGKDTS 174 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~----------~~~l~~~~l~~a~~~Lk~gG~lv~k~~----~~~~~~ 174 (249)
...+||+|++|+++.... .+... ........+..+.+.|+|||.+++.+. .+....
T Consensus 198 -------~~~~fD~Ii~NPPfg~~~---~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~ 267 (344)
T 2f8l_A 198 -------LVDPVDVVISDLPVGYYP---DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFA 267 (344)
T ss_dssp -------CCCCEEEEEEECCCSEES---CHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHH
T ss_pred -------ccCCccEEEECCCCCCcC---chhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHH
Confidence 246899999998753211 00000 000123467888999999999998662 444555
Q ss_pred HHHHHHh
Q 025715 175 LLYCQLK 181 (249)
Q Consensus 175 ~l~~~l~ 181 (249)
.+...+.
T Consensus 268 ~ir~~l~ 274 (344)
T 2f8l_A 268 KVDKFIK 274 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 223
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.76 E-value=4.1e-08 Score=82.34 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=78.6
Q ss_pred cccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCCh
Q 025715 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (249)
Q Consensus 38 ~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~ 105 (249)
++++|.+|+|+|||+|.++.++++.. +..+|+|+|+++.. .+. ++++..+|..+.
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERG-------------QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA 78 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTT-------------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh
Confidence 45788999999999999999998864 24699999999842 233 588899998652
Q ss_pred hhHHHHHHhcCCC-cccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-
Q 025715 106 RTAEVVIRHFDGC-KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF- 183 (249)
Q Consensus 106 ~~~~~i~~~~~~~-~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~- 183 (249)
+..+ +||+|+..+. | -.++..++..+...|+++|+||+.-. .....+...+...
T Consensus 79 ---------l~~~~~~D~IviaG~----G---------g~~i~~Il~~~~~~L~~~~~lVlq~~--~~~~~vr~~L~~~G 134 (225)
T 3kr9_A 79 ---------FEETDQVSVITIAGM----G---------GRLIARILEEGLGKLANVERLILQPN--NREDDLRIWLQDHG 134 (225)
T ss_dssp ---------CCGGGCCCEEEEEEE----C---------HHHHHHHHHHTGGGCTTCCEEEEEES--SCHHHHHHHHHHTT
T ss_pred ---------cccCcCCCEEEEcCC----C---------hHHHHHHHHHHHHHhCCCCEEEEECC--CCHHHHHHHHHHCC
Confidence 2333 6998875321 1 12345678888999999999998544 3455555545433
Q ss_pred CCe
Q 025715 184 FPV 186 (249)
Q Consensus 184 f~~ 186 (249)
|.-
T Consensus 135 f~i 137 (225)
T 3kr9_A 135 FQI 137 (225)
T ss_dssp EEE
T ss_pred CEE
Confidence 543
No 224
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.76 E-value=1.6e-07 Score=84.11 Aligned_cols=105 Identities=23% Similarity=0.295 Sum_probs=75.3
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC----CCCCCceEeecCCCChh
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNAR 106 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~----~~~~~v~~~~gDi~~~~ 106 (249)
++.+.+.-+.++.+|||+|||+|.++..++++.+ ..+++++|+..+ ...++++++.+|+.++
T Consensus 193 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~- 258 (368)
T 3reo_A 193 KILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYP-------------SINAINFDLPHVIQDAPAFSGVEHLGGDMFDG- 258 (368)
T ss_dssp HHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCTTTC-
T ss_pred HHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCC-------------CCEEEEEehHHHHHhhhhcCCCEEEecCCCCC-
Confidence 4445554346678999999999999999998874 578999999322 1246899999999862
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
++. . |+|++..... ++... -...+++.+.+.|+|||++++..+
T Consensus 259 --------~p~-~-D~v~~~~vlh-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 259 --------VPK-G-DAIFIKWICH-----DWSDE----HCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp --------CCC-C-SEEEEESCGG-----GBCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred --------CCC-C-CEEEEechhh-----cCCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 233 3 9998865432 12221 124578889999999999998654
No 225
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.75 E-value=5.1e-08 Score=86.27 Aligned_cols=109 Identities=19% Similarity=0.284 Sum_probs=77.5
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CC-CCceEee
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQ 99 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~-~~v~~~~ 99 (249)
++.+.+.+...+.+|||+|||+|.++..++++.+ ..+++++|+..+. .+ .+++++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~ 235 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHP-------------QLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFE 235 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-------------CCeEEEEECHHHHHHHHHHHHhcCCCCceEEEe
Confidence 4555555434378999999999999999998864 5799999993321 12 3589999
Q ss_pred cCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 100 gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+|+.+.+. +..+.||+|++...... .+.. -+..++..+.+.|+|||.+++...
T Consensus 236 ~d~~~~~~-------~~~~~~D~v~~~~vlh~-----~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 236 KNLLDARN-------FEGGAADVVMLNDCLHY-----FDAR----EAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp CCTTCGGG-------GTTCCEEEEEEESCGGG-----SCHH----HHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCcccCcc-------cCCCCccEEEEeccccc-----CCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99987541 12356999998654321 2221 134678889999999999998654
No 226
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.75 E-value=3.1e-08 Score=80.85 Aligned_cols=107 Identities=13% Similarity=0.029 Sum_probs=67.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C--C--CceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I--E--GVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~--~--~v~~~~gDi~~~~~~~ 109 (249)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++... . . +++++++|+.+.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~---- 109 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-G-------------AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF---- 109 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC----
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc----
Confidence 46789999999999999998875 2 25899999997320 1 1 688899998763
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL 182 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~ 182 (249)
+ .+||+|++|++...... ... ...+..+.++| ||.+++.+........+...+..
T Consensus 110 ------~-~~~D~v~~~~p~~~~~~-~~~--------~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~ 164 (207)
T 1wy7_A 110 ------N-SRVDIVIMNPPFGSQRK-HAD--------RPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWE 164 (207)
T ss_dssp ------C-CCCSEEEECCCCSSSST-TTT--------HHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHH
T ss_pred ------C-CCCCEEEEcCCCccccC-Cch--------HHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHH
Confidence 2 48999999986543221 111 23456666777 55443321122223334444443
No 227
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.73 E-value=6.2e-08 Score=85.92 Aligned_cols=104 Identities=16% Similarity=0.089 Sum_probs=74.9
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------C-CCCceEeecC
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-IEGVIQVQGD 101 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~-~~~v~~~~gD 101 (249)
++.+.+. +.++.+|||+|||+|.++..++++.+ ..+++++|+.++. . .++++++.+|
T Consensus 175 ~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d 240 (348)
T 3lst_A 175 ILARAGD-FPATGTVADVGGGRGGFLLTVLREHP-------------GLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGD 240 (348)
T ss_dssp HHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCT-------------TEEEEEEECHHHHTTCCCCCGGGTTSEEEEECC
T ss_pred HHHHhCC-ccCCceEEEECCccCHHHHHHHHHCC-------------CCEEEEecCHHHhhcccccccCCCCCeEEEecC
Confidence 4445554 35678999999999999999998864 5689999985421 1 1368899999
Q ss_pred CCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 102 i~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+.+. ++ +||+|++...... .+.. .+..++..+.++|||||.|++...
T Consensus 241 ~~~~---------~p--~~D~v~~~~vlh~-----~~d~----~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 241 FLRE---------VP--HADVHVLKRILHN-----WGDE----DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp TTTC---------CC--CCSEEEEESCGGG-----SCHH----HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCC---------CC--CCcEEEEehhccC-----CCHH----HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 9742 23 8999998654321 2221 123578899999999999998654
No 228
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.73 E-value=4.8e-09 Score=90.46 Aligned_cols=125 Identities=14% Similarity=0.122 Sum_probs=74.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C-------------------CC-
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I-------------------EG- 94 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~-------------------~~- 94 (249)
++.+|||+|||+|.++..++.. + ...|+|+|+++... + .+
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-------------FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGK 136 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-------------CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCS
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-------------CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCc
Confidence 6789999999999954333332 2 36999999997321 0 01
Q ss_pred ---------------ceEeecCCCC-hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcc
Q 025715 95 ---------------VIQVQGDITN-ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (249)
Q Consensus 95 ---------------v~~~~gDi~~-~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk 158 (249)
++++.+|+.+ .+.. ...+..++||+|++........ .+ ..-...++..+.++||
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~~~~~~~fD~V~~~~~l~~~~---~~----~~~~~~~l~~~~r~Lk 206 (289)
T 2g72_A 137 GECWQDKERQLRARVKRVLPIDVHQPQPLG---AGSPAPLPADALVSAFCLEAVS---PD----LASFQRALDHITTLLR 206 (289)
T ss_dssp CCCHHHHHHHHHHHEEEEECCCTTSSSTTC---SSCSSCSSEEEEEEESCHHHHC---SS----HHHHHHHHHHHHTTEE
T ss_pred ccchhhhHHHHHhhhceEEecccCCCCCcc---ccccCCCCCCEEEehhhhhhhc---CC----HHHHHHHHHHHHHhcC
Confidence 2234457765 2100 0012346799999976432110 00 1113467889999999
Q ss_pred CCCEEEEEEec---------------CCCHHHHHHHHhcC-CCeeEE
Q 025715 159 EGGKFIAKIFR---------------GKDTSLLYCQLKLF-FPVVTF 189 (249)
Q Consensus 159 ~gG~lv~k~~~---------------~~~~~~l~~~l~~~-f~~v~~ 189 (249)
|||.|++.... ..+..++..+++.. |+.+.+
T Consensus 207 pGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 207 PGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp EEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 99999985311 12455666666654 665544
No 229
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.72 E-value=2.2e-07 Score=83.06 Aligned_cols=105 Identities=20% Similarity=0.218 Sum_probs=75.5
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC----CCCCCceEeecCCCChh
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNAR 106 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~----~~~~~v~~~~gDi~~~~ 106 (249)
.+.+.+.-+.++.+|||+|||+|.++..++++.+ ..+++++|+..+ ...++++++.+|+.++
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~- 256 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYP-------------TIKGVNFDLPHVISEAPQFPGVTHVGGDMFKE- 256 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCTTTC-
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCC-------------CCeEEEecCHHHHHhhhhcCCeEEEeCCcCCC-
Confidence 4455554346778999999999999999998874 578999999332 1246899999999862
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
++. . |+|++..... ++... -+..+++.+.+.|+|||++++..+
T Consensus 257 --------~p~-~-D~v~~~~vlh-----~~~d~----~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 257 --------VPS-G-DTILMKWILH-----DWSDQ----HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp --------CCC-C-SEEEEESCGG-----GSCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred --------CCC-C-CEEEehHHhc-----cCCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 233 3 9998865332 12211 124578899999999999998654
No 230
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.72 E-value=3.2e-08 Score=83.29 Aligned_cols=112 Identities=13% Similarity=-0.008 Sum_probs=78.5
Q ss_pred CcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCC
Q 025715 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITN 104 (249)
Q Consensus 37 ~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~ 104 (249)
.++++|.+|+|+|||+|.++.++++.. +..+|+|+|+++.. .+ .++++..+|..+
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~ 83 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMG-------------YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS 83 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT-------------CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 345789999999999999999998764 24689999999842 13 358899999876
Q ss_pred hhhHHHHHHhcCC-CcccEEEe-CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc
Q 025715 105 ARTAEVVIRHFDG-CKADLVVC-DGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL 182 (249)
Q Consensus 105 ~~~~~~i~~~~~~-~~~DlVls-D~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~ 182 (249)
.. .+ ..||+|+. .+. ..++..++..+...|+++|+|++.-.. ....+...+..
T Consensus 84 ~~---------~~~~~~D~IviaGmG--------------g~lI~~IL~~~~~~l~~~~~lIlqp~~--~~~~lr~~L~~ 138 (230)
T 3lec_A 84 AF---------EEADNIDTITICGMG--------------GRLIADILNNDIDKLQHVKTLVLQPNN--REDDLRKWLAA 138 (230)
T ss_dssp GC---------CGGGCCCEEEEEEEC--------------HHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHH
T ss_pred cc---------ccccccCEEEEeCCc--------------hHHHHHHHHHHHHHhCcCCEEEEECCC--ChHHHHHHHHH
Confidence 42 22 36999764 321 133456778888999999999986543 35555544443
Q ss_pred -CCCe
Q 025715 183 -FFPV 186 (249)
Q Consensus 183 -~f~~ 186 (249)
-|.-
T Consensus 139 ~Gf~i 143 (230)
T 3lec_A 139 NDFEI 143 (230)
T ss_dssp TTEEE
T ss_pred CCCEE
Confidence 3543
No 231
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.72 E-value=2e-07 Score=82.91 Aligned_cols=105 Identities=20% Similarity=0.240 Sum_probs=75.2
Q ss_pred HhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceE
Q 025715 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQ 97 (249)
Q Consensus 30 ~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~ 97 (249)
.++.+.+. +.++.+|||+|||+|.++..++++.+ ..+++++|+ +.. .++ ++++
T Consensus 180 ~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~ 244 (359)
T 1x19_A 180 QLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFP-------------ELDSTILNL-PGAIDLVNENAAEKGVADRMRG 244 (359)
T ss_dssp HHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCT-------------TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCC-------------CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEE
Confidence 34445554 35678999999999999999998864 579999999 632 133 4899
Q ss_pred eecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 98 ~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+.+|+.+.+ ++ ..|+|++...... .+. +....++..+.++|+|||.+++..+
T Consensus 245 ~~~d~~~~~--------~~--~~D~v~~~~vlh~-----~~d----~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 245 IAVDIYKES--------YP--EADAVLFCRILYS-----ANE----QLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp EECCTTTSC--------CC--CCSEEEEESCGGG-----SCH----HHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred EeCccccCC--------CC--CCCEEEEechhcc-----CCH----HHHHHHHHHHHHhcCCCCEEEEEec
Confidence 999998743 22 3499998654321 221 1134678889999999999987654
No 232
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.72 E-value=2.4e-07 Score=81.37 Aligned_cols=103 Identities=18% Similarity=0.197 Sum_probs=74.2
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------------CCCceEe
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------------IEGVIQV 98 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------------~~~v~~~ 98 (249)
.+.+.+.+ .+ .+|||+|||+|.++..++++.+ ..+++++|+ +... -++++++
T Consensus 159 ~~~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~ 222 (334)
T 2ip2_A 159 EIPRLLDF-RG-RSFVDVGGGSGELTKAILQAEP-------------SARGVMLDR-EGSLGVARDNLSSLLAGERVSLV 222 (334)
T ss_dssp HHHHHSCC-TT-CEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEE
T ss_pred HHHHhCCC-CC-CEEEEeCCCchHHHHHHHHHCC-------------CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEe
Confidence 34444443 44 8999999999999999998864 479999999 6321 1468999
Q ss_pred ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+|+.+. ++ .+||+|++..... +++.. ....++..+.+.|+|||.+++...
T Consensus 223 ~~d~~~~---------~~-~~~D~v~~~~vl~-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 223 GGDMLQE---------VP-SNGDIYLLSRIIG-----DLDEA----ASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp ESCTTTC---------CC-SSCSEEEEESCGG-----GCCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cCCCCCC---------CC-CCCCEEEEchhcc-----CCCHH----HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 9999763 23 5799999865432 12221 124578889999999999998654
No 233
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.72 E-value=1.3e-07 Score=84.33 Aligned_cols=96 Identities=17% Similarity=0.159 Sum_probs=71.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..+++..+ ..+++++|+ +.. .+ .+++++.+|+.+.
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 244 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-------------HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP-- 244 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC--
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-------------CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc--
Confidence 5678999999999999999998863 479999999 621 12 3789999998762
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
++ ..||+|++...... .+.. ....++..+.++|+|||.+++..+
T Consensus 245 -------~~-~~~D~v~~~~vl~~-----~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 245 -------LP-VTADVVLLSFVLLN-----WSDE----DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -------CS-CCEEEEEEESCGGG-----SCHH----HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -------CC-CCCCEEEEeccccC-----CCHH----HHHHHHHHHHHhcCCCcEEEEEec
Confidence 23 34999998764321 2221 123578888999999999998655
No 234
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.71 E-value=1.5e-08 Score=91.03 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=71.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..++.... .+.|+|+|+++.. .+ .++++.++|+.+.+
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~-------------~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~- 281 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRY-------------SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS- 281 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTC-------------CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG-
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCC-------------CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-
Confidence 5789999999999999999987642 3599999999842 12 46789999998754
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
+..++||+|++|++... +.........++...+..+.++| ||.+++.+.
T Consensus 282 -------~~~~~fD~Ii~npPyg~---r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 282 -------QYVDSVDFAISNLPYGL---KIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp -------GTCSCEEEEEEECCCC---------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred -------cccCCcCEEEECCCCCc---ccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 23478999999986432 11111112345566778888888 666665443
No 235
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.71 E-value=4.9e-08 Score=89.37 Aligned_cols=97 Identities=13% Similarity=0.045 Sum_probs=67.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------------C--CCCceEee
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------P--IEGVIQVQ 99 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------------~--~~~v~~~~ 99 (249)
.++.+|||||||+|.++..+++..+ ..+|+|||+++.. . +.++++++
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g-------------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECG-------------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 6789999999999999999998765 3589999998731 1 35678888
Q ss_pred cCCCC-hhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 100 GDITN-ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 100 gDi~~-~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+|... ..... . ...+||+|+++.... ..+ ...++..+.+.|||||.+++.
T Consensus 308 gD~~~~~~~~~---~--~~~~FDvIvvn~~l~-----~~d-------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 308 KKSFVDNNRVA---E--LIPQCDVILVNNFLF-----DED-------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp SSCSTTCHHHH---H--HGGGCSEEEECCTTC-----CHH-------HHHHHHHHHTTCCTTCEEEES
T ss_pred cCccccccccc---c--ccCCCCEEEEeCccc-----ccc-------HHHHHHHHHHhCCCCeEEEEe
Confidence 76442 11110 0 125799999874321 011 124567888999999999984
No 236
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.70 E-value=2.7e-07 Score=79.57 Aligned_cols=112 Identities=19% Similarity=-0.012 Sum_probs=69.3
Q ss_pred hhhHHhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecC-CCCC-------------C
Q 025715 26 AFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL-QPMA-------------P 91 (249)
Q Consensus 26 ~~KL~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi-~~~~-------------~ 91 (249)
...|.+......-..++.+|||||||+|.++..+++. + ..+|+++|+ ++.. .
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-------------~~~v~~~D~s~~~~~~~a~~n~~~N~~~ 129 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-------------ADQVVATDYPDPEILNSLESNIREHTAN 129 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-------------CSEEEEEECSCHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-------------CCEEEEEeCCCHHHHHHHHHHHHHhhhh
Confidence 4445444333322357789999999999999888764 3 258999999 6521 0
Q ss_pred ---C-----CCceEeecCCCChhhHHHHHHhcCCCcccEEEe-CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcc---C
Q 025715 92 ---I-----EGVIQVQGDITNARTAEVVIRHFDGCKADLVVC-DGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK---E 159 (249)
Q Consensus 92 ---~-----~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVls-D~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk---~ 159 (249)
+ .++++...|..+.. ..+...+..++||+|++ |.... ... ...++..+.++|+ |
T Consensus 130 ~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~fD~Ii~~dvl~~------~~~------~~~ll~~l~~~Lk~~~p 195 (281)
T 3bzb_A 130 SCSSETVKRASPKVVPYRWGDSP--DSLQRCTGLQRFQVVLLADLLSF------HQA------HDALLRSVKMLLALPAN 195 (281)
T ss_dssp ---------CCCEEEECCTTSCT--HHHHHHHSCSSBSEEEEESCCSC------GGG------HHHHHHHHHHHBCCTTT
T ss_pred hcccccCCCCCeEEEEecCCCcc--HHHHhhccCCCCCEEEEeCcccC------hHH------HHHHHHHHHHHhcccCC
Confidence 1 24666655554421 11222223578999987 44221 111 2346777889999 9
Q ss_pred --CCEEEE
Q 025715 160 --GGKFIA 165 (249)
Q Consensus 160 --gG~lv~ 165 (249)
||.+++
T Consensus 196 ~~gG~l~v 203 (281)
T 3bzb_A 196 DPTAVALV 203 (281)
T ss_dssp CTTCEEEE
T ss_pred CCCCEEEE
Confidence 998876
No 237
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.70 E-value=2.2e-07 Score=81.69 Aligned_cols=104 Identities=17% Similarity=0.159 Sum_probs=74.5
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEe
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQV 98 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~ 98 (249)
++.+.+. +.++.+|||+|||+|.++..+++..+ ..+++++|+ +.. .+ +++++.
T Consensus 160 ~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~ 224 (332)
T 3i53_A 160 GIAAKYD-WAALGHVVDVGGGSGGLLSALLTAHE-------------DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVV 224 (332)
T ss_dssp TGGGSSC-CGGGSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHhCC-CCCCCEEEEeCCChhHHHHHHHHHCC-------------CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEe
Confidence 3334443 24568999999999999999998864 578999999 521 12 568999
Q ss_pred ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+|+.++ ++. +||+|++..... +++.. .+..++..+.+.|+|||.+++...
T Consensus 225 ~~d~~~~---------~p~-~~D~v~~~~vlh-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 225 VGSFFDP---------LPA-GAGGYVLSAVLH-----DWDDL----SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp ECCTTSC---------CCC-SCSEEEEESCGG-----GSCHH----HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCCCC---------CCC-CCcEEEEehhhc-----cCCHH----HHHHHHHHHHHhcCCCCEEEEEee
Confidence 9999742 233 799999865432 12221 124578889999999999998654
No 238
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.69 E-value=2.8e-08 Score=84.31 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=78.0
Q ss_pred CcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCC
Q 025715 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITN 104 (249)
Q Consensus 37 ~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~ 104 (249)
.++++|.+|||+|||+|.++.++++.. +..+|+|+|+++.. .+. ++++..+|..+
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~ 83 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQ-------------TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA 83 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTT-------------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhh
Confidence 345789999999999999999998764 24689999999842 233 48889999876
Q ss_pred hhhHHHHHHhcCCC-cccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc-
Q 025715 105 ARTAEVVIRHFDGC-KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL- 182 (249)
Q Consensus 105 ~~~~~~i~~~~~~~-~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~- 182 (249)
. +.++ +||+|+.-+. | ..++..++..+...|+++|+||+.-.. ....+...|..
T Consensus 84 ~---------~~~~~~~D~Iviagm----G---------g~lI~~IL~~~~~~L~~~~~lIlq~~~--~~~~lr~~L~~~ 139 (244)
T 3gnl_A 84 V---------IEKKDAIDTIVIAGM----G---------GTLIRTILEEGAAKLAGVTKLILQPNI--AAWQLREWSEQN 139 (244)
T ss_dssp G---------CCGGGCCCEEEEEEE----C---------HHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHH
T ss_pred c---------cCccccccEEEEeCC----c---------hHHHHHHHHHHHHHhCCCCEEEEEcCC--ChHHHHHHHHHC
Confidence 3 2223 5999875221 1 134456788889999999999986533 34455544443
Q ss_pred CCC
Q 025715 183 FFP 185 (249)
Q Consensus 183 ~f~ 185 (249)
-|.
T Consensus 140 Gf~ 142 (244)
T 3gnl_A 140 NWL 142 (244)
T ss_dssp TEE
T ss_pred CCE
Confidence 254
No 239
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.69 E-value=4.8e-08 Score=80.62 Aligned_cols=91 Identities=19% Similarity=0.239 Sum_probs=66.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhcC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
++.+|||+|||+|.++..++ . . +++|+++... -.+++++++|+.+.+ +.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~---~--------------~--~~vD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~ 99 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLK---I--------------K--IGVEPSERMAEIARKRGVFVLKGTAENLP--------LK 99 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHT---C--------------C--EEEESCHHHHHHHHHTTCEEEECBTTBCC--------SC
T ss_pred CCCcEEEeCCCCCHHHHHHH---H--------------H--hccCCCHHHHHHHHhcCCEEEEcccccCC--------CC
Confidence 48899999999999887653 1 2 9999987421 126888899987643 34
Q ss_pred CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 117 GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 117 ~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
.++||+|++....... .+. ..++..+.++|+|||.+++....
T Consensus 100 ~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 100 DESFDFALMVTTICFV----DDP-------ERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp TTCEEEEEEESCGGGS----SCH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEEcchHhhc----cCH-------HHHHHHHHHHcCCCcEEEEEEeC
Confidence 5689999998654322 121 25678889999999999997654
No 240
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.68 E-value=3.8e-08 Score=95.83 Aligned_cols=99 Identities=17% Similarity=0.160 Sum_probs=72.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------------CCCCceEeecCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------------PIEGVIQVQGDI 102 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------------~~~~v~~~~gDi 102 (249)
.++.+|||+|||+|.++..++++.+ +..+|+|+|+++.. .+++++++++|+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~------------p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPT------------SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCC------------CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC------------CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 3778999999999999999987653 24699999999731 134689999999
Q ss_pred CChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+.+ +..++||+|++...... .... .....+..+.++|||| .+++.+.
T Consensus 788 ~dLp--------~~d~sFDlVV~~eVLeH-----L~dp----~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 788 LEFD--------SRLHDVDIGTCLEVIEH-----MEED----QACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp TSCC--------TTSCSCCEEEEESCGGG-----SCHH----HHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred HhCC--------cccCCeeEEEEeCchhh-----CChH----HHHHHHHHHHHHcCCC-EEEEEec
Confidence 8854 24578999999765432 1221 1234678889999999 7776553
No 241
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.68 E-value=1.9e-08 Score=91.10 Aligned_cols=94 Identities=19% Similarity=0.102 Sum_probs=68.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCC--ceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG--VIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~--v~~~~gDi~~~~ 106 (249)
++|.+|||+|||+|+++..++.+.+ ...+|+++|+++.+ .+.+ ++++++|+.+.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~------------ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~- 117 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETS------------CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFF- 117 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCS------------CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH-
T ss_pred CCCCEEEECCCcccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHH-
Confidence 4688999999999999999998753 12589999999843 2333 78888887542
Q ss_pred hHHHHHH-hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 107 TAEVVIR-HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 107 ~~~~i~~-~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
.. .+ .++||+|+.|+ + |. . ...+..+.++|++||.+++..
T Consensus 118 -----l~~~~-~~~fD~V~lDP-~---g~---~--------~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 118 -----LRKEW-GFGFDYVDLDP-F---GT---P--------VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp -----HHSCC-SSCEEEEEECC-S---SC---C--------HHHHHHHHHHEEEEEEEEEEE
T ss_pred -----HHHhh-CCCCcEEEECC-C---cC---H--------HHHHHHHHHHhCCCCEEEEEe
Confidence 22 22 35799999997 2 11 1 135677888999999887754
No 242
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.67 E-value=6.1e-08 Score=86.57 Aligned_cols=130 Identities=18% Similarity=0.154 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------C------C-----CCceEeecC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P------I-----EGVIQVQGD 101 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~------~-----~~v~~~~gD 101 (249)
++.+|||||+|.|+.+..++++. ..+|++||+++.. + + ++++++.+|
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--------------~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~D 253 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--------------PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 253 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--------------CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred CCCEEEEEECChhHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECc
Confidence 56899999999999999887652 2689999999731 1 1 157888888
Q ss_pred CCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC--HHHHHH-
Q 025715 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD--TSLLYC- 178 (249)
Q Consensus 102 i~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~--~~~l~~- 178 (249)
....- +...+ ..++||+|++|+.-...+. ...+....+.+...+..+.++|+|||.+++......- ...++.
T Consensus 254 a~~~L--~~~~~--~~~~fDvII~D~~d~P~~~-~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~ 328 (364)
T 2qfm_A 254 CIPVL--KRYAK--EGREFDYVINDLTAVPIST-SPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEE 328 (364)
T ss_dssp HHHHH--HHHHH--HTCCEEEEEEECCSSCCCC-C----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHH
T ss_pred HHHHH--Hhhhc--cCCCceEEEECCCCcccCc-CchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHH
Confidence 76521 11100 2468999999975301110 0111112344455667779999999999987654432 223333
Q ss_pred HHhcCCCeeEE
Q 025715 179 QLKLFFPVVTF 189 (249)
Q Consensus 179 ~l~~~f~~v~~ 189 (249)
.++..|..|.+
T Consensus 329 ~l~~~F~~v~~ 339 (364)
T 2qfm_A 329 QLGRLYCPVEF 339 (364)
T ss_dssp HHTTSSSCEEE
T ss_pred HHHHhCCceEE
Confidence 36678998887
No 243
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.66 E-value=2.4e-07 Score=82.22 Aligned_cols=97 Identities=18% Similarity=0.237 Sum_probs=70.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..++++.+ ..+++++|+ +.. .+ .+++++.+|+.+.
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 245 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP-------------HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP-- 245 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC--
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC-------------CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC--
Confidence 5678999999999999999998764 578999998 531 12 2689999999762
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
++ ..||+|++...... .... ....++..+.++|+|||.+++..+.
T Consensus 246 -------~~-~~~D~v~~~~vl~~-----~~~~----~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 246 -------LP-RKADAIILSFVLLN-----WPDH----DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -------CS-SCEEEEEEESCGGG-----SCHH----HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -------CC-CCccEEEEcccccC-----CCHH----HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 23 35999998754321 2211 1235778889999999999986543
No 244
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.65 E-value=3.1e-08 Score=89.31 Aligned_cols=91 Identities=13% Similarity=0.001 Sum_probs=66.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------------------------CCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------------------PIEG 94 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------------------------~~~~ 94 (249)
++.+|||+|||+|.++..++.+.+ ..+|+++|+++.+ .+.+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-------------~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~ 113 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-------------AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT 113 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-------------CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc
Confidence 678999999999999999998864 3689999999842 1223
Q ss_pred ceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 95 VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 95 v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
++++++|+.+.. ... .++||+|+.|+... . ...+..+.+.|++||.+++.
T Consensus 114 i~v~~~Da~~~~------~~~-~~~fD~I~lDP~~~-------~--------~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 114 IVINHDDANRLM------AER-HRYFHFIDLDPFGS-------P--------MEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp EEEEESCHHHHH------HHS-TTCEEEEEECCSSC-------C--------HHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEcCcHHHHH------Hhc-cCCCCEEEeCCCCC-------H--------HHHHHHHHHhcCCCCEEEEE
Confidence 677888875431 122 35799999997311 0 13567788999999987764
No 245
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.65 E-value=1.4e-08 Score=85.73 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=67.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---------CCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---------~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++..++++. .+|+|+|+++... .++++++++|+.+.+
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~---------------~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~---- 88 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS---------------KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQ---- 88 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS---------------SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTT----
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---------------CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcC----
Confidence 578899999999999999998863 6899999998431 136788999998753
Q ss_pred HHHhcC-CCcccEEEeCCCCCCCCCCCcCHHHHHHHHH------HHH----HHHHHhccCCCEEEE
Q 025715 111 VIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLIL------AGL----TVVTHVLKEGGKFIA 165 (249)
Q Consensus 111 i~~~~~-~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~------~~l----~~a~~~Lk~gG~lv~ 165 (249)
+. +++| .|++|++.... ......+.. ..+ +.+.++|+|||.|++
T Consensus 89 ----~~~~~~f-~vv~n~Py~~~------~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 89 ----FPNKQRY-KIVGNIPYHLS------TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp ----CCCSSEE-EEEEECCSSSC------HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred ----cccCCCc-EEEEeCCcccc------HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 23 2578 88998764432 111111111 122 668899999998776
No 246
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.65 E-value=1.5e-07 Score=84.08 Aligned_cols=99 Identities=18% Similarity=0.174 Sum_probs=71.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.+..+|||+|||+|.++..++++.+ ..+++++|+ +.. .+ ++++++.+|+.+.+.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-------------EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV 243 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-------------TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-------------CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC
Confidence 4567999999999999999998864 579999998 521 11 368999999987420
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.++ ++||+|++..... +++.. -...++..+.+.|+|||++++...
T Consensus 244 ------~~p-~~~D~v~~~~vlh-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 244 ------PFP-TGFDAVWMSQFLD-----CFSEE----EVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp ------CCC-CCCSEEEEESCST-----TSCHH----HHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ------CCC-CCcCEEEEechhh-----hCCHH----HHHHHHHHHHHhcCCCcEEEEEee
Confidence 023 6899999865432 12221 123578889999999999988554
No 247
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.65 E-value=5.6e-08 Score=79.03 Aligned_cols=104 Identities=16% Similarity=0.038 Sum_probs=66.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++.. ...+++++++|+.+.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~-------- 107 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G-------------AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEI-------- 107 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T-------------BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGC--------
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHC--------
Confidence 46789999999999999998875 3 2589999999742 123788999998763
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHh
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLK 181 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~ 181 (249)
+ ++||+|++|+++..... . .....+..+.+.| |+ +++ ++.+.....+...+.
T Consensus 108 --~-~~~D~v~~~~p~~~~~~----~-----~~~~~l~~~~~~~--g~-~~~-~~~~~~~~~~~~~~~ 159 (200)
T 1ne2_A 108 --S-GKYDTWIMNPPFGSVVK----H-----SDRAFIDKAFETS--MW-IYS-IGNAKARDFLRREFS 159 (200)
T ss_dssp --C-CCEEEEEECCCC----------------CHHHHHHHHHHE--EE-EEE-EEEGGGHHHHHHHHH
T ss_pred --C-CCeeEEEECCCchhccC----c-----hhHHHHHHHHHhc--Cc-EEE-EEcCchHHHHHHHHH
Confidence 2 58999999986543211 0 0123566677777 44 333 333334444444443
No 248
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.65 E-value=2.9e-08 Score=92.15 Aligned_cols=95 Identities=17% Similarity=0.267 Sum_probs=67.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CC-CCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~-~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++. + ..+|+|+|++++. .+ ++++++++|+.+.+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-------------~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-- 220 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-------------ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-- 220 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-------------CSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-------------CCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCc--
Confidence 46789999999999999988863 3 3699999999831 12 46899999998742
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
++ ++||+|+|++..... ..+ .....+..+.++|||||.+++.
T Consensus 221 ------~~-~~fD~Ivs~~~~~~~----~~e-----~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 221 ------LP-EQVDIIISEPMGYML----FNE-----RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp ------CS-SCEEEEECCCCHHHH----TCH-----HHHHHHHHGGGGEEEEEEEESC
T ss_pred ------cC-CCeEEEEEeCchHhc----CcH-----HHHHHHHHHHHhcCCCCEEEEE
Confidence 22 589999997632110 011 1123455778999999999853
No 249
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.63 E-value=6.4e-07 Score=80.06 Aligned_cols=105 Identities=14% Similarity=0.155 Sum_probs=75.7
Q ss_pred HhhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------C-CCCceE
Q 025715 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQ 97 (249)
Q Consensus 30 ~ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~-~~~v~~ 97 (249)
..+.+.++ +.++.+|||+|||+|.++..++++.+ ..+++++|+ +.. . .+++++
T Consensus 192 ~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~ 256 (369)
T 3gwz_A 192 GQVAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFP-------------GLRGTLLER-PPVAEEARELLTGRGLADRCEI 256 (369)
T ss_dssp HHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHhCC-CccCcEEEEeCCCccHHHHHHHHHCC-------------CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEE
Confidence 34445554 35678999999999999999998864 579999999 521 1 246899
Q ss_pred eecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 98 ~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
..+|+.++ ++. +||+|++...... .+... +..++..+.+.|+|||.+++...
T Consensus 257 ~~~d~~~~---------~p~-~~D~v~~~~vlh~-----~~d~~----~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 257 LPGDFFET---------IPD-GADVYLIKHVLHD-----WDDDD----VVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp EECCTTTC---------CCS-SCSEEEEESCGGG-----SCHHH----HHHHHHHHHTTCCTTCEEEEEEE
T ss_pred eccCCCCC---------CCC-CceEEEhhhhhcc-----CCHHH----HHHHHHHHHHHcCCCCEEEEEEe
Confidence 99999842 233 7999998654321 22211 23578889999999999998654
No 250
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.62 E-value=2e-07 Score=82.75 Aligned_cols=96 Identities=18% Similarity=0.235 Sum_probs=71.7
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC-----CCCCCceEeecCCCChhhHHHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~-----~~~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
+.++.+|||+|||+|.++..++++.+ ..+++++|+ +. ...++++++.+|+.+.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~-------- 243 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-------------KLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTS-------- 243 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTC--------
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-------------CCeEEEeeC-HHHHhhcccCCCcEEEeccccCC--------
Confidence 45678999999999999999998864 478999999 52 1246799999999762
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccC---CCEEEEEEe
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKE---GGKFIAKIF 168 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~---gG~lv~k~~ 168 (249)
++ .||+|++...... .... -+..++..+.++||| ||++++..+
T Consensus 244 -~p--~~D~v~~~~~lh~-----~~d~----~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 244 -IP--NADAVLLKYILHN-----WTDK----DCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp -CC--CCSEEEEESCGGG-----SCHH----HHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred -CC--CccEEEeehhhcc-----CCHH----HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 23 3999998654321 2221 123578889999999 999988654
No 251
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.59 E-value=3.3e-07 Score=79.01 Aligned_cols=107 Identities=10% Similarity=0.082 Sum_probs=69.1
Q ss_pred CCeEEEEcCCC--ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C--CCCceEeecCCCChhhH
Q 025715 42 VKRVVDLCAAP--GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P--IEGVIQVQGDITNARTA 108 (249)
Q Consensus 42 g~~vLDLG~gp--G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~--~~~v~~~~gDi~~~~~~ 108 (249)
..+|||||||+ ++.+..++++.. +..+|++||.++.. . ..+++++++|+.+++..
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~------------P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~ 146 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVA------------PESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASI 146 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHC------------TTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHC------------CCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhh
Confidence 36899999997 445555555554 46899999999832 1 12488999999986421
Q ss_pred HHHHHh-cCCCccc-----EEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC
Q 025715 109 EVVIRH-FDGCKAD-----LVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (249)
Q Consensus 109 ~~i~~~-~~~~~~D-----lVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~ 171 (249)
... .....|| .|+++....+... .+. ...++....+.|+|||.|++..+...
T Consensus 147 ---l~~~~~~~~~D~~~p~av~~~avLH~l~d--~~~------p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 147 ---LDAPELRDTLDLTRPVALTVIAIVHFVLD--EDD------AVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp ---HTCHHHHTTCCTTSCCEEEEESCGGGSCG--GGC------HHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred ---hcccccccccCcCCcchHHhhhhHhcCCc--hhh------HHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 100 0012344 5788776554321 110 12467788999999999999877543
No 252
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.58 E-value=5.7e-08 Score=83.88 Aligned_cols=99 Identities=19% Similarity=0.168 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCCCh----HHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CC------------------
Q 025715 41 GVKRVVDLCAAPGS----WSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI------------------ 92 (249)
Q Consensus 41 ~g~~vLDLG~gpG~----~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~------------------ 92 (249)
++.+|+|+|||+|. ++..+++.++... .+.+|+|+|+++.. ..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~---------~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f 175 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAP---------GRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYF 175 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCT---------TSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCC---------CCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHh
Confidence 45799999999998 4555666654110 12589999998731 00
Q ss_pred ------------------CCceEeecCCCChhhHHHHHHhcC-CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Q 025715 93 ------------------EGVIQVQGDITNARTAEVVIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV 153 (249)
Q Consensus 93 ------------------~~v~~~~gDi~~~~~~~~i~~~~~-~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a 153 (249)
.+|.|.++|+.+.+ ++ .++||+|+|-....+ .+.. ....++...
T Consensus 176 ~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~--------~~~~~~fDlI~crnvliy-----f~~~----~~~~vl~~~ 238 (274)
T 1af7_A 176 MRGTGPHEGLVRVRQELANYVEFSSVNLLEKQ--------YNVPGPFDAIFCRNVMIY-----FDKT----TQEDILRRF 238 (274)
T ss_dssp EECCTTSCSEEEECHHHHTTEEEEECCTTCSS--------CCCCCCEEEEEECSSGGG-----SCHH----HHHHHHHHH
T ss_pred hccccCCCCceeechhhcccCeEEecccCCCC--------CCcCCCeeEEEECCchHh-----CCHH----HHHHHHHHH
Confidence 14778888887742 22 368999999543211 1221 235678889
Q ss_pred HHhccCCCEEEE
Q 025715 154 THVLKEGGKFIA 165 (249)
Q Consensus 154 ~~~Lk~gG~lv~ 165 (249)
.+.|+|||.|++
T Consensus 239 ~~~L~pgG~L~l 250 (274)
T 1af7_A 239 VPLLKPDGLLFA 250 (274)
T ss_dssp GGGEEEEEEEEE
T ss_pred HHHhCCCcEEEE
Confidence 999999999987
No 253
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.55 E-value=6.7e-08 Score=87.60 Aligned_cols=100 Identities=12% Similarity=0.016 Sum_probs=66.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----CCCCceEeecCCCChhhHHHHHHhc
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHF 115 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----~~~~v~~~~gDi~~~~~~~~i~~~~ 115 (249)
.++.+|||+|||+|.++..++++ + ..|+|+|+++.. .-.++......+. ......+. +
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~-g--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~-~~~~~~l~--~ 167 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA-G--------------VRHLGFEPSSGVAAKAREKGIRVRTDFFE-KATADDVR--R 167 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT-T--------------CEEEEECCCHHHHHHHHTTTCCEECSCCS-HHHHHHHH--H
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-C--------------CcEEEECCCHHHHHHHHHcCCCcceeeec-hhhHhhcc--c
Confidence 57889999999999999999875 2 599999999732 0113333322221 11111111 2
Q ss_pred CCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 116 ~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+++||+|++........ + ....+..+.++|||||.|++.+.
T Consensus 168 ~~~~fD~I~~~~vl~h~~----d-------~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIP----Y-------VQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp HHCCEEEEEEESCGGGCT----T-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEEEECChHHhcC----C-------HHHHHHHHHHHcCCCeEEEEEeC
Confidence 347899999987654321 2 13578889999999999998753
No 254
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.54 E-value=8.9e-08 Score=83.49 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=48.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..++++ + .+|+|+|+++.. ..++++++++|+.+.+
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~-~--------------~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-- 103 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL-A--------------KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-- 103 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT-S--------------SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC--
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC--
Confidence 57889999999999999998865 2 699999999732 2357888999997743
Q ss_pred HHHHHhcCCCcccEEEeCCCC
Q 025715 109 EVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~ 129 (249)
..+||+|++|++.
T Consensus 104 --------~~~~D~Vv~n~py 116 (299)
T 2h1r_A 104 --------FPKFDVCTANIPY 116 (299)
T ss_dssp --------CCCCSEEEEECCG
T ss_pred --------cccCCEEEEcCCc
Confidence 2479999999754
No 255
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.54 E-value=6e-07 Score=79.78 Aligned_cols=105 Identities=19% Similarity=0.203 Sum_probs=75.1
Q ss_pred hhhhhcC-cccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC----CCCCCceEeecCCCCh
Q 025715 31 QIDEEFN-IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNA 105 (249)
Q Consensus 31 ei~~~~~-~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~----~~~~~v~~~~gDi~~~ 105 (249)
.+.+.+. -+.++.+|||+|||+|.++..++++.+ ..+++++|+..+ ...++++++.+|+.+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~- 247 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFP-------------HLKCTVFDQPQVVGNLTGNENLNFVGGDMFK- 247 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCT-------------TSEEEEEECHHHHSSCCCCSSEEEEECCTTT-
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCC-------------CCeEEEeccHHHHhhcccCCCcEEEeCccCC-
Confidence 4444551 245678999999999999999998864 578999998432 124678999999976
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccC---CCEEEEEEe
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKE---GGKFIAKIF 168 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~---gG~lv~k~~ 168 (249)
+ ++ .+|+|++...... .+.. .+..++..+.+.|+| ||++++..+
T Consensus 248 ~--------~~--~~D~v~~~~vlh~-----~~d~----~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 248 S--------IP--SADAVLLKWVLHD-----WNDE----QSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp C--------CC--CCSEEEEESCGGG-----SCHH----HHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred C--------CC--CceEEEEcccccC-----CCHH----HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 2 23 4999998754321 2221 123678889999999 999998644
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.54 E-value=1.7e-07 Score=86.12 Aligned_cols=120 Identities=14% Similarity=0.088 Sum_probs=72.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC--CceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~--~v~~~~gDi~~~~ 106 (249)
.++.+|+|.|||+|+++..+++++.................++|+|+++.. .+. ++.+.++|....+
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 457899999999999999988876311000000000012579999999732 122 5667889987643
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcC----HHH--HHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMD----EFV--QSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~----~~~--~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
...+||+|++|+++......... ... ........+..+.++|+|||++++.+.
T Consensus 250 ---------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 250 ---------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp ---------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 12489999999865432211000 000 000113467788899999999988663
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.51 E-value=1.8e-07 Score=83.89 Aligned_cols=93 Identities=13% Similarity=0.249 Sum_probs=65.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~~~ 110 (249)
+.+|||||||+|.++..+++.. .+|+|+|+++.+ .+++++++++|+.+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~---------------~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~---- 274 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF---------------DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT---- 274 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS---------------SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH----
T ss_pred CCEEEEccCCCCHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH----
Confidence 5789999999999999888632 599999999842 2457889999986531
Q ss_pred HHHhcCC--------------CcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC
Q 025715 111 VIRHFDG--------------CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 111 i~~~~~~--------------~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~ 172 (249)
..+.. .+||+|+.|++. .|. ...+.+.|+++|.+++..+.+..
T Consensus 275 --~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr--~g~---------------~~~~~~~l~~~g~ivyvsc~p~t 331 (369)
T 3bt7_A 275 --QAMNGVREFNRLQGIDLKSYQCETIFVDPPR--SGL---------------DSETEKMVQAYPRILYISCNPET 331 (369)
T ss_dssp --HHHSSCCCCTTGGGSCGGGCCEEEEEECCCT--TCC---------------CHHHHHHHTTSSEEEEEESCHHH
T ss_pred --HHHhhccccccccccccccCCCCEEEECcCc--ccc---------------HHHHHHHHhCCCEEEEEECCHHH
Confidence 11121 379999999743 222 12345667799999987665443
No 258
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.50 E-value=3e-08 Score=81.00 Aligned_cols=92 Identities=9% Similarity=-0.056 Sum_probs=62.3
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~ 106 (249)
+.+..+|||||||+|.++..++...+ ..+|+|+|+++-. ... ++.+ .|....
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p-------------~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~- 110 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENE-------------KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD- 110 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSC-------------CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCC-------------CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-
Confidence 46778999999999999998876543 5699999999832 122 2333 444221
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
...++||+|++.-.... ++-...++....+.|+|||.||-
T Consensus 111 --------~~~~~~DvVLa~k~LHl-----------L~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 111 --------VYKGTYDVVFLLKMLPV-----------LKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp --------HTTSEEEEEEEETCHHH-----------HHHTTCCHHHHHHTCEEEEEEEE
T ss_pred --------CCCCCcChhhHhhHHHh-----------hhhhHHHHHHHHHHhCCCCEEEE
Confidence 24578999998532111 11122345578899999999885
No 259
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.50 E-value=6.1e-07 Score=82.02 Aligned_cols=88 Identities=14% Similarity=0.117 Sum_probs=63.8
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~ 107 (249)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++.+ .+. ++++++|+.+..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~--------------~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~- 350 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-G--------------FNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS- 350 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC-
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC-
Confidence 467889999999999999999875 2 599999999742 133 889999998742
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
. .+||+|++|++. .|. .. .++ .+.+.|+|||.+++.
T Consensus 351 --------~-~~fD~Vv~dPPr--~g~---~~--------~~~-~~l~~l~p~givyvs 386 (425)
T 2jjq_A 351 --------V-KGFDTVIVDPPR--AGL---HP--------RLV-KRLNREKPGVIVYVS 386 (425)
T ss_dssp --------C-TTCSEEEECCCT--TCS---CH--------HHH-HHHHHHCCSEEEEEE
T ss_pred --------c-cCCCEEEEcCCc--cch---HH--------HHH-HHHHhcCCCcEEEEE
Confidence 2 279999999742 232 21 112 223458999988874
No 260
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.48 E-value=2.5e-07 Score=80.05 Aligned_cols=66 Identities=20% Similarity=0.230 Sum_probs=52.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC-CCceEeecCCCChhh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~-~~v~~~~gDi~~~~~ 107 (249)
.++.+|||+|||+|.++..++++. .+|+|+|+++.. .. ++++++++|+.+.+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~- 90 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA---------------KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD- 90 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC-
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC---------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc-
Confidence 578899999999999999999863 599999999731 11 46889999998743
Q ss_pred HHHHHHhcCCCcccEEEeCCCCC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPD 130 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~ 130 (249)
-.+||+|++|.+.+
T Consensus 91 ---------~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 91 ---------LPFFDTCVANLPYQ 104 (285)
T ss_dssp ---------CCCCSEEEEECCGG
T ss_pred ---------chhhcEEEEecCcc
Confidence 23799999997644
No 261
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.47 E-value=6.4e-07 Score=84.30 Aligned_cols=121 Identities=16% Similarity=0.079 Sum_probs=73.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCC-----CCCCeEEEecCCCCC-----------CCCC-----ceEe
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSRE-----GDLPLIVAIDLQPMA-----------PIEG-----VIQV 98 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~-----~~~~~vvavDi~~~~-----------~~~~-----v~~~ 98 (249)
.++.+|+|.|||+|+|...+.+++....+..+.... -....++|+|+++.. .+.+ +.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 467899999999999999988876421100000000 002479999999832 2233 5678
Q ss_pred ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCC----cCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHD----MDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~----~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
++|....+. ....+||+|++|+++....... .... ........+..+.+.|+|||++++.+.
T Consensus 248 ~gDtL~~~~-------~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~-~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 248 LGNTLGSDG-------ENLPKAHIVATNPPFGSAAGTNITRTFVHP-TSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp ESCTTSHHH-------HTSCCEEEEEECCCCTTCSSCCCCSCCSSC-CSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCCCccccc-------ccccCCeEEEECCCcccccchhhHhhcCCC-CCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 898776431 1346899999998764321100 0000 000112467788999999999998654
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.42 E-value=5.1e-07 Score=76.30 Aligned_cols=66 Identities=11% Similarity=0.179 Sum_probs=50.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++..++++. .+|+|+|+++.. ..++++++++|+.+.+
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~---- 89 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC---------------NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFK---- 89 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCC----
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC---------------CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCC----
Confidence 578899999999999999999863 589999999731 2357899999987643
Q ss_pred HHHhcCC-CcccEEEeCCCC
Q 025715 111 VIRHFDG-CKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~~-~~~DlVlsD~~~ 129 (249)
+.. ..+ .|++|++.
T Consensus 90 ----~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 90 ----FPKNQSY-KIFGNIPY 104 (244)
T ss_dssp ----CCSSCCC-EEEEECCG
T ss_pred ----cccCCCe-EEEEeCCc
Confidence 222 344 68888754
No 263
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.35 E-value=5.5e-07 Score=78.46 Aligned_cols=68 Identities=12% Similarity=0.151 Sum_probs=54.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++..++++ + .+|+|||+++.. ..++++++++|+.+.+
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~-~--------------~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~---- 109 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN-A--------------KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVD---- 109 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSC----
T ss_pred CCcCEEEEECCCchHHHHHHHhc-C--------------CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCC----
Confidence 57889999999999999999986 3 699999999843 1368899999998753
Q ss_pred HHHhcCCCcccEEEeCCCCC
Q 025715 111 VIRHFDGCKADLVVCDGAPD 130 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~ 130 (249)
+...+||+|++|++.+
T Consensus 110 ----~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 110 ----LNKLDFNKVVANLPYQ 125 (295)
T ss_dssp ----GGGSCCSEEEEECCGG
T ss_pred ----cccCCccEEEEeCccc
Confidence 2334699999997543
No 264
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.35 E-value=3e-06 Score=75.36 Aligned_cols=105 Identities=18% Similarity=0.132 Sum_probs=74.0
Q ss_pred hhhhhcCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CCCCceEeec
Q 025715 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQG 100 (249)
Q Consensus 31 ei~~~~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~~~v~~~~g 100 (249)
.+.+.+. +.+..+|||+|||+|.++..++++.+ ..+++..|+.++. ..++|+++.+
T Consensus 170 ~~~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~p-------------~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~g 235 (353)
T 4a6d_A 170 SVLTAFD-LSVFPLMCDLGGGAGALAKECMSLYP-------------GCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEG 235 (353)
T ss_dssp HHHHSSC-GGGCSEEEEETCTTSHHHHHHHHHCS-------------SCEEEEEECHHHHHHHHHHSCC--CCSEEEEES
T ss_pred HHHHhcC-cccCCeEEeeCCCCCHHHHHHHHhCC-------------CceeEeccCHHHHHHHHHhhhhcccCceeeecC
Confidence 4444554 35567999999999999999999875 5788888874321 1357999999
Q ss_pred CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 101 Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
|+.+.+ ...+|+|+.-... ++++... +..+|+.+.+.|+|||++++...
T Consensus 236 D~~~~~----------~~~~D~~~~~~vl-----h~~~d~~----~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 236 DFFKDP----------LPEADLYILARVL-----HDWADGK----CSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp CTTTSC----------CCCCSEEEEESSG-----GGSCHHH----HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ccccCC----------CCCceEEEeeeec-----ccCCHHH----HHHHHHHHHhhCCCCCEEEEEEe
Confidence 997643 2357999875332 2223221 34578899999999999988643
No 265
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.34 E-value=2.4e-06 Score=78.09 Aligned_cols=70 Identities=20% Similarity=0.252 Sum_probs=52.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||+|.++..+++. . .+|+|+|+++.. .+.+++++++|+.+.-.
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~-~--------------~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~- 348 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ-A--------------ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVT- 348 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT-S--------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCS-
T ss_pred CCCCEEEECCCCCCHHHHHHHhh-C--------------CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhh-
Confidence 46789999999999999999875 3 699999999832 24578999999976210
Q ss_pred HHHHHhcCCCcccEEEeCCC
Q 025715 109 EVVIRHFDGCKADLVVCDGA 128 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~ 128 (249)
.+ .+..++||+|++|++
T Consensus 349 -~~--~~~~~~fD~Vv~dPP 365 (433)
T 1uwv_A 349 -KQ--PWAKNGFDKVLLDPA 365 (433)
T ss_dssp -SS--GGGTTCCSEEEECCC
T ss_pred -hh--hhhcCCCCEEEECCC
Confidence 00 023458999999974
No 266
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.29 E-value=1.2e-06 Score=76.49 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=54.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CC-CCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI-EGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~-~~v~~~~gDi~~~~~~~ 109 (249)
+++.+|||+|||+|+++..++++.+ .++|+|+|+++.+ .. .+++++++|+.+.+.
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~-------------~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~-- 89 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP-------------GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-- 89 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH--
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH--
Confidence 5788999999999999999998863 4799999999842 11 478999999876531
Q ss_pred HHHHhcCCCcccEEEeCC
Q 025715 110 VVIRHFDGCKADLVVCDG 127 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~ 127 (249)
........+||.|++|+
T Consensus 90 -~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 90 -LLKTLGIEKVDGILMDL 106 (301)
T ss_dssp -HHHHTTCSCEEEEEEEC
T ss_pred -HHHhcCCCCCCEEEEcC
Confidence 11222225799999986
No 267
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.27 E-value=3.1e-06 Score=82.35 Aligned_cols=111 Identities=14% Similarity=0.046 Sum_probs=70.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--------------CCC---ceEeecCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--------------IEG---VIQVQGDI 102 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--------------~~~---v~~~~gDi 102 (249)
.++.+|||.|||+|++...++++++.. ....++|+|+++... ..+ ..+...|+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei----------~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~ 389 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNV----------MPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDV 389 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTC----------CGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhccc----------CCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecch
Confidence 457899999999999999998876411 135899999998420 112 23334455
Q ss_pred CChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHH--H-H-----------------HHHHHHHHHHHHhccCCCE
Q 025715 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFV--Q-S-----------------QLILAGLTVVTHVLKEGGK 162 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~--~-~-----------------~l~~~~l~~a~~~Lk~gG~ 162 (249)
.+... ....+||+|++|++..... ..+... . . .+....+..+.++|++||+
T Consensus 390 L~~~~-------~~~~kFDVVIgNPPYg~~~--~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGr 460 (878)
T 3s1s_A 390 CSLNP-------EDFANVSVVVMNPPYVSGV--TDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTV 460 (878)
T ss_dssp GGCCG-------GGGTTEEEEEECCBCCSSC--CCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCE
T ss_pred hcccc-------cccCCCCEEEECCCccccc--cchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcE
Confidence 43211 1236799999998653211 111110 0 0 1244567889999999999
Q ss_pred EEEEEec
Q 025715 163 FIAKIFR 169 (249)
Q Consensus 163 lv~k~~~ 169 (249)
+++-+-.
T Consensus 461 LAfIlP~ 467 (878)
T 3s1s_A 461 ISAIMPK 467 (878)
T ss_dssp EEEEEET
T ss_pred EEEEECh
Confidence 9986543
No 268
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.22 E-value=1.4e-05 Score=62.18 Aligned_cols=105 Identities=21% Similarity=0.199 Sum_probs=69.7
Q ss_pred hhhHHhhhhhc--CcccCCCeEEEEcCCCC-hHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCC
Q 025715 26 AFKLLQIDEEF--NIFEGVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDI 102 (249)
Q Consensus 26 ~~KL~ei~~~~--~~~~~g~~vLDLG~gpG-~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi 102 (249)
++||+|-...| +-.+++.+|||+|||+| ..+.+|++..+ ..|+|+|+++.+.- +++.|+
T Consensus 18 ~~~m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g--------------~~V~atDInp~Av~----~v~dDi 79 (153)
T 2k4m_A 18 GSHMWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSK--------------VDLVLTDIKPSHGG----IVRDDI 79 (153)
T ss_dssp CCHHHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSC--------------CEEEEECSSCSSTT----EECCCS
T ss_pred hhhHHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCC--------------CeEEEEECCccccc----eEEccC
Confidence 46776544433 11245679999999999 58888887544 68999999997632 889999
Q ss_pred CChhhHHHHHHhcCCCcccEEEe-CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC
Q 025715 103 TNARTAEVVIRHFDGCKADLVVC-DGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (249)
Q Consensus 103 ~~~~~~~~i~~~~~~~~~DlVls-D~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~ 172 (249)
+++... +. +.||+|.+ ++++. |+..++++|.++ |..|+++.+..+.
T Consensus 80 F~P~~~------~Y-~~~DLIYsirPP~E--------------l~~~i~~lA~~v---~adliI~pL~~E~ 126 (153)
T 2k4m_A 80 TSPRME------IY-RGAALIYSIRPPAE--------------IHSSLMRVADAV---GARLIIKPLTGED 126 (153)
T ss_dssp SSCCHH------HH-TTEEEEEEESCCTT--------------THHHHHHHHHHH---TCEEEEECBTTBC
T ss_pred CCCccc------cc-CCcCEEEEcCCCHH--------------HHHHHHHHHHHc---CCCEEEEcCCCCc
Confidence 986521 11 37999955 33221 233455555543 7788888776544
No 269
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.20 E-value=7.9e-06 Score=73.88 Aligned_cols=114 Identities=12% Similarity=-0.045 Sum_probs=67.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCC-C--------CCC----------------CCCCCCCeEEEecCCCCC----
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK-L--------SPD----------------SREGDLPLIVAIDLQPMA---- 90 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~-~--------~~~----------------~~~~~~~~vvavDi~~~~---- 90 (249)
+++..|||.|||+|.++..++.......+ . |.. .+......|+|+|+++..
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 46789999999999999888765431100 0 000 001233679999999842
Q ss_pred -------CCC-CceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCE
Q 025715 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (249)
Q Consensus 91 -------~~~-~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~ 162 (249)
.+. .+++.++|+.+.. ...+||+|++|++. |.+..+......++ ..+...++. -+||.
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~---------~~~~fD~Iv~NPPY---g~rl~~~~~l~~ly-~~lg~~lk~-~~g~~ 345 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQ---------TEDEYGVVVANPPY---GERLEDEEAVRQLY-REMGIVYKR-MPTWS 345 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCC---------CCCCSCEEEECCCC---CCSHHHHHHHHHHH-HHHHHHHHT-CTTCE
T ss_pred HHHHHHcCCCCceEEEECChHhCC---------CCCCCCEEEECCCC---ccccCCchhHHHHH-HHHHHHHhc-CCCCE
Confidence 233 4889999998753 23589999999854 22222222222232 233333343 35888
Q ss_pred EEEEE
Q 025715 163 FIAKI 167 (249)
Q Consensus 163 lv~k~ 167 (249)
+.+-+
T Consensus 346 ~~iit 350 (393)
T 3k0b_A 346 VYVLT 350 (393)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88744
No 270
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.18 E-value=7e-06 Score=74.02 Aligned_cols=114 Identities=12% Similarity=-0.013 Sum_probs=67.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCC-C--------CCC----------------CCCCCCCeEEEecCCCCC----
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK-L--------SPD----------------SREGDLPLIVAIDLQPMA---- 90 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~-~--------~~~----------------~~~~~~~~vvavDi~~~~---- 90 (249)
.++.+|||+|||+|+++..++.......+ . +.. .+......|+|+|+++..
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 56789999999999999988776421100 0 000 001123689999999842
Q ss_pred -------CCC-CceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCE
Q 025715 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (249)
Q Consensus 91 -------~~~-~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~ 162 (249)
.+. .+++.++|+.+.. ...++|+|++|++.. .+..+......++ ..+...++. -+||.
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~---------~~~~~D~Iv~NPPyg---~rl~~~~~l~~ly-~~lg~~lk~-~~g~~ 339 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFK---------SEDEFGFIITNPPYG---ERLEDKDSVKQLY-KELGYAFRK-LKNWS 339 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCC---------CSCBSCEEEECCCCC---CSHHHHHHHHHHH-HHHHHHHHT-SBSCE
T ss_pred HHHHHHcCCCCceEEEECChhhcC---------cCCCCcEEEECCCCc---CccCCHHHHHHHH-HHHHHHHhh-CCCCE
Confidence 122 5788999987743 235899999998642 2211122222222 223333333 34888
Q ss_pred EEEEE
Q 025715 163 FIAKI 167 (249)
Q Consensus 163 lv~k~ 167 (249)
+.+-+
T Consensus 340 ~~iit 344 (385)
T 3ldu_A 340 YYLIT 344 (385)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87744
No 271
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.15 E-value=1.2e-05 Score=72.55 Aligned_cols=114 Identities=11% Similarity=-0.064 Sum_probs=68.4
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCC-C--------CCC----------------CCCCCCCeEEEecCCCCC----
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK-L--------SPD----------------SREGDLPLIVAIDLQPMA---- 90 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~-~--------~~~----------------~~~~~~~~vvavDi~~~~---- 90 (249)
+++..+||.+||+|++...++.......+ . +.. .+......|+|+|+++..
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 46789999999999999888765431100 0 000 001123579999999842
Q ss_pred -------CCC-CceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCE
Q 025715 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (249)
Q Consensus 91 -------~~~-~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~ 162 (249)
.+. .+++.++|+.+.. ...+||+|++|++.. .+-.+......++. .+...++. .+||.
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~---------~~~~fD~Iv~NPPYG---~rl~~~~~l~~ly~-~lg~~lk~-~~g~~ 338 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFK---------TNKINGVLISNPPYG---ERLLDDKAVDILYN-EMGETFAP-LKTWS 338 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCC---------CCCCSCEEEECCCCT---TTTSCHHHHHHHHH-HHHHHHTT-CTTSE
T ss_pred HHHHHHcCCCCceEEEECChHHCC---------ccCCcCEEEECCchh---hccCCHHHHHHHHH-HHHHHHhh-CCCcE
Confidence 233 4788999998753 235899999998643 22223333333332 23333333 45999
Q ss_pred EEEEE
Q 025715 163 FIAKI 167 (249)
Q Consensus 163 lv~k~ 167 (249)
+.+-+
T Consensus 339 ~~iit 343 (384)
T 3ldg_A 339 QFILT 343 (384)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88744
No 272
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.11 E-value=2.7e-06 Score=80.03 Aligned_cols=114 Identities=16% Similarity=0.042 Sum_probs=73.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CC--CCceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~--~~v~~~~gDi~~~~ 106 (249)
.++.+|+|.|||+|+|...+.+++... ....++|+|+++.. .+ +++.+.++|....+
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~----------~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d 289 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQP----------QTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDED 289 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCT----------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhc----------cCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccc
Confidence 467899999999999999988876411 24689999999842 12 34567889876531
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCCCCCC----cCH-HH-------HHHHHHHHHHHHHHhcc-CCCEEEEEEe
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHD----MDE-FV-------QSQLILAGLTVVTHVLK-EGGKFIAKIF 168 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~----~~~-~~-------~~~l~~~~l~~a~~~Lk-~gG~lv~k~~ 168 (249)
. ......+||+|++|+++....... .+. +. ........+..+.+.|+ +||++++-+.
T Consensus 290 ~-----p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 290 W-----PTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp S-----CCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred c-----cccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 0 002346899999998765221000 000 00 00011246788899999 9999988654
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.10 E-value=6.2e-07 Score=76.61 Aligned_cols=70 Identities=20% Similarity=0.097 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCC-------CC-----------CCC-CceEeec
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP-------MA-----------PIE-GVIQVQG 100 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~-------~~-----------~~~-~v~~~~g 100 (249)
.++.+|||+|||+|.++..++.. + ++|+++|+++ .. .+. +++++++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~-g--------------~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~ 146 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL-G--------------LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFG 146 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT-T--------------CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEES
T ss_pred CCcCeEEEeeCccCHHHHHHHHh-C--------------CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEEC
Confidence 46789999999999999999875 3 6899999999 32 122 3889999
Q ss_pred CCCChhhHHHHHHhcCC--CcccEEEeCCCCC
Q 025715 101 DITNARTAEVVIRHFDG--CKADLVVCDGAPD 130 (249)
Q Consensus 101 Di~~~~~~~~i~~~~~~--~~~DlVlsD~~~~ 130 (249)
|+.+.. . .+.+ ++||+|++|+.+.
T Consensus 147 d~~~~l--~----~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 147 NAAEQM--P----ALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp CHHHHH--H----HHHHHHCCCSEEEECCCC-
T ss_pred CHHHHH--H----hhhccCCCccEEEECCCCC
Confidence 976521 1 1222 5799999998653
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.09 E-value=1.8e-06 Score=73.79 Aligned_cols=69 Identities=19% Similarity=0.189 Sum_probs=51.6
Q ss_pred cCC--CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------------C----C-CCceE
Q 025715 40 EGV--KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------P----I-EGVIQ 97 (249)
Q Consensus 40 ~~g--~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------------~----~-~~v~~ 97 (249)
++| .+|||+|||.|..+..++.+ + ++|++||+++.. . + .++++
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~-g--------------~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~ 149 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASV-G--------------CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQL 149 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHH-T--------------CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEE
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEE
Confidence 466 89999999999999999987 4 589999999831 0 2 35778
Q ss_pred eecCCCChhhHHHHHHhcCCCcccEEEeCCCCC
Q 025715 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPD 130 (249)
Q Consensus 98 ~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~ 130 (249)
+++|..+. ...+. .+||+|+.|+.+.
T Consensus 150 ~~~D~~~~------L~~~~-~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 150 IHASSLTA------LTDIT-PRPQVVYLDPMFP 175 (258)
T ss_dssp EESCHHHH------STTCS-SCCSEEEECCCCC
T ss_pred EECCHHHH------HHhCc-ccCCEEEEcCCCC
Confidence 88887542 11233 3799999998654
No 275
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.09 E-value=3.2e-06 Score=79.94 Aligned_cols=68 Identities=28% Similarity=0.251 Sum_probs=50.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|||+|||.|.++..++++ | ..|+|||+++.. ...++++.++|+.+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-g--------------a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~--- 126 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-G--------------ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV--- 126 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH---
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-C--------------CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH---
Confidence 45679999999999999999975 4 799999999832 112467777876543
Q ss_pred HHHHHhcCCCcccEEEeCCC
Q 025715 109 EVVIRHFDGCKADLVVCDGA 128 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~ 128 (249)
...+.+++||+|+|-..
T Consensus 127 ---~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 127 ---IAALEEGEFDLAIGLSV 143 (569)
T ss_dssp ---HHHCCTTSCSEEEEESC
T ss_pred ---hhhccCCCccEEEECcc
Confidence 23345678999999543
No 276
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.09 E-value=1.4e-06 Score=79.20 Aligned_cols=114 Identities=17% Similarity=0.027 Sum_probs=70.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------CCCCceEeecCCCChh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNAR 106 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------------~~~~v~~~~gDi~~~~ 106 (249)
++|.+|||||||+|..+.++++. + .+|++||+++.. .+.+++++++|+.+.-
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~-g--------------~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L 156 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK-A--------------SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYL 156 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT-C--------------SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSH
T ss_pred CCCCEEEEeCCCchHHHHHHHhc-C--------------CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhh
Confidence 45899999999999999988764 2 699999999842 1245889999998631
Q ss_pred hHHHHHHhcCCCcccEEEeCCCCCCC-CCCCcCHHHHHHHHHHHHHHHHH-hccCCCEEEEEEecCCCHHHHHH
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAPDVT-GLHDMDEFVQSQLILAGLTVVTH-VLKEGGKFIAKIFRGKDTSLLYC 178 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~~~~-g~~~~~~~~~~~l~~~~l~~a~~-~Lk~gG~lv~k~~~~~~~~~l~~ 178 (249)
.. +...+||+|++|++.... |.+..+... +..-+..... ++..+..+++|+...-+....+.
T Consensus 157 --~~----~~~~~fDvV~lDPPrr~~~~grv~~led----~~P~l~~~~~~l~~~~~~~~vK~sP~ld~~~~~~ 220 (410)
T 3ll7_A 157 --PL----IKTFHPDYIYVDPARRSGADKRVYAIAD----CEPDLIPLATELLPFCSSILAKLSPMIDLWDTLQ 220 (410)
T ss_dssp --HH----HHHHCCSEEEECCEEC-----CCCCGGG----EESCHHHHHHHHGGGSSEEEEEECTTSCHHHHHH
T ss_pred --hh----ccCCCceEEEECCCCcCCCCceEEehhh----cCCCHHHHHHHHHhhCCcEEEEcCCCCChHHHHh
Confidence 11 112479999999853321 111111100 0001222233 45567788899877777665443
No 277
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.07 E-value=2.2e-06 Score=73.04 Aligned_cols=69 Identities=10% Similarity=0.079 Sum_probs=51.8
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++..++++. .+|+|+|+++.. ..++++++++|+.+.+..
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~---------------~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~-- 90 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC---------------DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS-- 90 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS---------------SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG--
T ss_pred CCcCEEEEEcccccHHHHHHHHhC---------------CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH--
Confidence 578899999999999999998752 699999999732 135789999999886421
Q ss_pred HHHhcCCCcccEEEeCCC
Q 025715 111 VIRHFDGCKADLVVCDGA 128 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~ 128 (249)
+.+.++.+| |++|.+
T Consensus 91 --~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 91 --SVKTDKPLR-VVGNLP 105 (255)
T ss_dssp --GSCCSSCEE-EEEECC
T ss_pred --HhccCCCeE-EEecCC
Confidence 111235688 888864
No 278
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.04 E-value=4.9e-06 Score=71.58 Aligned_cols=68 Identities=15% Similarity=-0.028 Sum_probs=52.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CCCCceEeecCCCChhhHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~~~v~~~~gDi~~~~~~~~i 111 (249)
.++ +|||+|||+|.++..++++. .+|+|+|+++.. .-.+++++++|+.+.+..
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~---------------~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~--- 106 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAG---------------AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWE--- 106 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTT---------------CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGG---
T ss_pred CCC-eEEEEeCchHHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChh---
Confidence 567 99999999999999999763 589999999843 124689999999875420
Q ss_pred HHhcCCCcccEEEeCCCCC
Q 025715 112 IRHFDGCKADLVVCDGAPD 130 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~ 130 (249)
....+|.|++|.+.+
T Consensus 107 ----~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 107 ----EVPQGSLLVANLPYH 121 (271)
T ss_dssp ----GSCTTEEEEEEECSS
T ss_pred ----hccCccEEEecCccc
Confidence 112689999998544
No 279
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=98.02 E-value=3.1e-05 Score=65.45 Aligned_cols=108 Identities=20% Similarity=0.202 Sum_probs=73.4
Q ss_pred CcccEEEeCCCCCCCCCCCcCHH-HHHHHHHHHHHHHHHhccCCCEEEEEEecCCC--HHHHHHHHhcCCCeeEEecCCC
Q 025715 118 CKADLVVCDGAPDVTGLHDMDEF-VQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD--TSLLYCQLKLFFPVVTFAKPKS 194 (249)
Q Consensus 118 ~~~DlVlsD~~~~~~g~~~~~~~-~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~--~~~l~~~l~~~f~~v~~~kP~~ 194 (249)
++||+|+.|+.-...-.+-.|-+ ..+.+ ..+-.-|+++|+|||+++++-+.-.+ .+.+...+.+.|+.+++.+|.-
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l-~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~P~c 288 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKL-QMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKPPC 288 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHH-HHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTT
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHH-HHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeecCcc
Confidence 68999999985433211111111 11222 34566788999999999999885433 5668888899999999999965
Q ss_pred CCCCCceEEEEEeeccC-CCCCCchhhhHhHHhh
Q 025715 195 SRNSSIEAFAVCENYFP-PEGFNPKDLHRLLEKV 227 (249)
Q Consensus 195 sr~~s~E~y~v~~g~~~-~~~~~~~~~~~~~~~~ 227 (249)
.- +++|.++|-.+|-+ ..-.++--|+..+.++
T Consensus 289 v~-snTEv~~vF~~~Dng~r~~t~h~ln~~ls~i 321 (324)
T 3trk_A 289 VT-SNTEMFFLFSNFDNGRRNFTTHVMNNQLNAA 321 (324)
T ss_dssp CC-BTTCEEEEEEEECCCCCCCCSHHHHHHHHHH
T ss_pred cc-ccceEEEEEEeccCCccccCHHHhhhhhhhh
Confidence 44 38899999999877 3444555565555543
No 280
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.97 E-value=9.3e-05 Score=64.21 Aligned_cols=153 Identities=16% Similarity=0.119 Sum_probs=96.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------------CCCCceEeecCCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDITN 104 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------------~~~~v~~~~gDi~~ 104 (249)
...+||=+|.|-|+....+++..+ ..+|+.|||++.. .-++++.+.+|...
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~-------------v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~ 149 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKN-------------VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVN 149 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTT-------------CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTT
T ss_pred CCCeEEEECCCchHHHHHHHHcCC-------------cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHH
Confidence 457999999999999988876532 4689999999731 12578889999876
Q ss_pred hhhHHHHHHhcCCCcccEEEeCCCCCC-CCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC----CHHHHHHH
Q 025715 105 ARTAEVVIRHFDGCKADLVVCDGAPDV-TGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQ 179 (249)
Q Consensus 105 ~~~~~~i~~~~~~~~~DlVlsD~~~~~-~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~----~~~~l~~~ 179 (249)
.- + -..++||+|+.|..-.. .+..-.. ...+..+.+.|+|||.+++..-.+. ....+...
T Consensus 150 ~l------~-~~~~~yDvIi~D~~dp~~~~~~L~t--------~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~ 214 (294)
T 3o4f_A 150 FV------N-QTSQTFDVIISDCTDPIGPGESLFT--------SAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRK 214 (294)
T ss_dssp TT------S-CSSCCEEEEEESCCCCCCTTCCSSC--------CHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHH
T ss_pred HH------h-hccccCCEEEEeCCCcCCCchhhcC--------HHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHH
Confidence 32 1 13468999999974221 1111111 2357788999999999998654332 23455566
Q ss_pred HhcCCCeeEEecCC-CCCCCCceEEEEEeeccCCCCCCchhhh
Q 025715 180 LKLFFPVVTFAKPK-SSRNSSIEAFAVCENYFPPEGFNPKDLH 221 (249)
Q Consensus 180 l~~~f~~v~~~kP~-~sr~~s~E~y~v~~g~~~~~~~~~~~~~ 221 (249)
++..|..|..+... .+-++..=.+.+|..-......++..++
T Consensus 215 l~~~F~~v~~~~~~vPty~~g~w~f~~as~~~~~~~~~~~~~~ 257 (294)
T 3o4f_A 215 LSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQ 257 (294)
T ss_dssp HHHHCSEEEEEEECCTTSSSSCEEEEEEESCTTGGGCCHHHHH
T ss_pred HHhhCCceeeeeeeeccCCCcceeheeEECCCccccCChHHHh
Confidence 77789988775321 1222333355666543333333444343
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.95 E-value=1.3e-05 Score=75.34 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=67.1
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCC--CCCCCCCeEEEecCCCCC-----------CCC-CceEeecCCCChhhHH
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPD--SREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNARTAE 109 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~--~~~~~~~~vvavDi~~~~-----------~~~-~v~~~~gDi~~~~~~~ 109 (249)
+|+|.|||+|+|...+.+.+....+.... .+......++|+|+++.. .+. .+.+.++|....+
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~--- 323 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDD--- 323 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSC---
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCc---
Confidence 99999999999998876654200000000 000002579999999842 111 2333677865432
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCc----C--------------HHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDM----D--------------EFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~----~--------------~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+...+||+|++|+++........ + ...........+..+.+.|+|||++++-+.
T Consensus 324 ----~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 324 ----QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp ----SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ----ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 123468999999997653210000 0 000000112467788999999999988654
No 282
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.92 E-value=6.3e-06 Score=78.63 Aligned_cols=96 Identities=24% Similarity=0.205 Sum_probs=64.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------C-CCceEeecCCCChhhHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------I-EGVIQVQGDITNARTAEV 110 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~-~~v~~~~gDi~~~~~~~~ 110 (249)
+..|||+|||+|-.+...++..... +...+|+|||-++++. + ..|++++||+.+.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~---------~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~---- 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQA---------DRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV---- 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHT---------TCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC----
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhc---------CCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc----
Confidence 4689999999999866544432100 0224799999999752 1 35899999999864
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv 164 (249)
+ ++++|+|+|-.. |..-..| .+ . ..+..+-++|||||.++
T Consensus 425 ----L-PEKVDIIVSEwM----G~fLl~E-~m---l-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 425 ----A-PEKADIIVSELL----GSFADNE-LS---P-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ----C-SSCEEEEECCCC----BTTBGGG-CH---H-HHHHHHGGGEEEEEEEE
T ss_pred ----C-CcccCEEEEEcC----ccccccc-CC---H-HHHHHHHHhcCCCcEEc
Confidence 2 478999999742 2111122 11 1 34566788999999976
No 283
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.90 E-value=3.7e-05 Score=74.43 Aligned_cols=118 Identities=11% Similarity=-0.082 Sum_probs=70.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCC-CCC----C---CCC---------------------CCCCCeEEEecCCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPA-KLS----P---DSR---------------------EGDLPLIVAIDLQPMA 90 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~-~~~----~---~~~---------------------~~~~~~vvavDi~~~~ 90 (249)
+++..+||.|||+|++...++....... +.. + +.. ......|+|+|+++..
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 4678999999999999988776532100 000 0 000 0123689999999842
Q ss_pred -----------CCC-CceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcc
Q 025715 91 -----------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (249)
Q Consensus 91 -----------~~~-~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk 158 (249)
.+. .+++.++|+.+... ....+++|+|++|++. |.+-.+......+ ...+...++.+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~------~~~~~~~d~Iv~NPPY---G~Rlg~~~~l~~l-y~~l~~~lk~~~ 338 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTN------PLPKGPYGTVLSNPPY---GERLDSEPALIAL-HSLLGRIMKNQF 338 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCC------SCTTCCCCEEEECCCC---CC---CCHHHHHH-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCcc------ccccCCCCEEEeCCCc---cccccchhHHHHH-HHHHHHHHHhhC
Confidence 233 37888999876421 0112379999999864 2221122222223 345666777788
Q ss_pred CCCEEEEEE
Q 025715 159 EGGKFIAKI 167 (249)
Q Consensus 159 ~gG~lv~k~ 167 (249)
|||++.+-+
T Consensus 339 ~g~~~~ilt 347 (703)
T 3v97_A 339 GGWNLSLFS 347 (703)
T ss_dssp TTCEEEEEE
T ss_pred CCCeEEEEe
Confidence 999988743
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.83 E-value=2.3e-05 Score=62.03 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=55.4
Q ss_pred ccCCCeEEEEcCCCChHHHH---HHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhc
Q 025715 39 FEGVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHF 115 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~ 115 (249)
+++|.+|||+|||... ... +.+... .+ . -.++++.++|+.+.+. ..+
T Consensus 10 ~~~g~~vL~~~~g~v~-vD~s~~ml~~a~--------------~~------~----~~~~~~~~~d~~~~~~-----~~~ 59 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSP-VEALKGLVDKLQ--------------AL------T----GNEGRVSVENIKQLLQ-----SAH 59 (176)
T ss_dssp CCTTSEEEEEECTTSC-HHHHHHHHHHHH--------------HH------T----TTTSEEEEEEGGGGGG-----GCC
T ss_pred CCCCCEEEEecCCcee-eeCCHHHHHHHH--------------Hh------c----ccCcEEEEechhcCcc-----ccC
Confidence 4789999999999865 211 111111 00 0 0136778888876531 012
Q ss_pred CCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 116 ~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
.+++||+|++.....+.. .+. ..++..+.++|||||.|++..
T Consensus 60 ~~~~fD~V~~~~~l~~~~-~~~---------~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 60 KESSFDIILSGLVPGSTT-LHS---------AEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp CSSCEEEEEECCSTTCCC-CCC---------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEeEEEECChhhhcc-cCH---------HHHHHHHHHHCCCCEEEEEEc
Confidence 467899999976544320 111 257889999999999999853
No 285
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=97.80 E-value=0.00021 Score=66.32 Aligned_cols=124 Identities=18% Similarity=0.169 Sum_probs=85.2
Q ss_pred CcccEEEeCCCCCCCCCCCcCH-HHHHHHHHHHHHHHHHhccCCCEEEEEEecCCC--HHHHHHHHhcCCCeeEEecCCC
Q 025715 118 CKADLVVCDGAPDVTGLHDMDE-FVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD--TSLLYCQLKLFFPVVTFAKPKS 194 (249)
Q Consensus 118 ~~~DlVlsD~~~~~~g~~~~~~-~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~--~~~l~~~l~~~f~~v~~~kP~~ 194 (249)
++||+|+.|..-.....+-.|- ...+. ...+-.-|+++|+|||+++++.+.-.+ .+.+...+.+.|..+++.+|.-
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCeDHa~~-l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~p~~ 298 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCEDHAAT-LKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAARPDC 298 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHH-HHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEECCTT
T ss_pred CcccEEEEecCCCcccchHHHHHHHHHH-HHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeCCCc
Confidence 5899999998543322211111 11122 234566788999999999999885333 5568888889999999999966
Q ss_pred CCCCCceEEEEEeeccC-C-CCCCchhhhHhHHhhCCCCCCCCCccccCceEE
Q 025715 195 SRNSSIEAFAVCENYFP-P-EGFNPKDLHRLLEKVGSPWGGEDQGQCACNIHY 245 (249)
Q Consensus 195 sr~~s~E~y~v~~g~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (249)
.. +++|.+++-.+|-. + ...++--|+..++++-+- +..+.-||-..|-
T Consensus 299 ~~-snTEv~~~f~~~Dn~r~r~~~~~~l~~~l~~iy~g--~~~~aG~APsfrI 348 (670)
T 4gua_A 299 VS-SNTEMYLIFRQLDNSRTRQFTPHHLNCVISSVYEG--TRDGVGAAPSYRT 348 (670)
T ss_dssp CS-BTTCEEEEEEEECCCSSCCCCSHHHHHHHHHHHTT--SCCCCCCCCCEEE
T ss_pred cc-cCceEEEEEEecCCCcccccCHHHhhhHHHHhhhc--cccccCcCcceeE
Confidence 54 45899999999986 3 455777788888887663 4455555555443
No 286
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.80 E-value=3.9e-05 Score=64.78 Aligned_cols=91 Identities=11% Similarity=0.018 Sum_probs=60.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CC--CCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PI--EGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~--~~v~~~~gDi~~~~~~~ 109 (249)
.+..+|||||||.|-++..+. + ...++|+|+++-. .. ....+..+|....+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~-------------~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~--- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---G-------------IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP--- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---T-------------CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC---
T ss_pred CCCCeEEEecCCccHHHHHhc---c-------------CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC---
Confidence 457899999999999998776 3 4799999999832 11 33466778887643
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
..+++|+|++.-...+ ..+............|+++|.+|-
T Consensus 165 ------~~~~~DvvLllk~lh~----------LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 165 ------PAEAGDLALIFKLLPL----------LEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp ------CCCBCSEEEEESCHHH----------HHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred ------CCCCcchHHHHHHHHH----------hhhhchhhHHHHHHHhcCCCEEEE
Confidence 3468999988643211 111111223355668999987774
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.80 E-value=3.8e-05 Score=65.47 Aligned_cols=121 Identities=16% Similarity=0.147 Sum_probs=70.7
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHh------cCCCCCCCCCCCCCCCeEEEecCCCCC-----------------------
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKL------YLPAKLSPDSREGDLPLIVAIDLQPMA----------------------- 90 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~------~~~~~~~~~~~~~~~~~vvavDi~~~~----------------------- 90 (249)
+++.+||++|+|+|.-+..+++.. .+..+ ....+++++|..|+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~-------~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~ 131 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQ-------LQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQA 131 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSS-------CCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCC-------cceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHH
Confidence 456899999999999888766543 31000 002589999998731
Q ss_pred C------------C----CCceEeecCCCChhhHHHHHHhcCC---CcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHH
Q 025715 91 P------------I----EGVIQVQGDITNARTAEVVIRHFDG---CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLT 151 (249)
Q Consensus 91 ~------------~----~~v~~~~gDi~~~~~~~~i~~~~~~---~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~ 151 (249)
. + .+++.+.||+.+. ...+.. ..||+|+.|+........-++ ...+.
T Consensus 132 ~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~------l~~~~~~~~~~~D~iflD~fsp~~~p~lw~--------~~~l~ 197 (257)
T 2qy6_A 132 QWPMPLPGCHRLLLDEGRVTLDLWFGDINEL------ISQLDDSLNQKVDAWFLDGFAPAKNPDMWT--------QNLFN 197 (257)
T ss_dssp TCCCSCSEEEEEEEC--CEEEEEEESCHHHH------GGGSCGGGTTCEEEEEECSSCTTTCGGGCC--------HHHHH
T ss_pred hccccccchhheeccCCceEEEEEECcHHHH------HhhcccccCCeEEEEEECCCCcccChhhcC--------HHHHH
Confidence 0 1 1244567776541 112222 279999999732111000012 24677
Q ss_pred HHHHhccCCCEEEEEEecCCCHHHHHHHHhcC-CC
Q 025715 152 VVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLF-FP 185 (249)
Q Consensus 152 ~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~~-f~ 185 (249)
.+.++|+|||+|+. +... ..+...|... |.
T Consensus 198 ~l~~~L~pGG~l~t--ysaa--~~vrr~L~~aGF~ 228 (257)
T 2qy6_A 198 AMARLARPGGTLAT--FTSA--GFVRRGLQEAGFT 228 (257)
T ss_dssp HHHHHEEEEEEEEE--SCCB--HHHHHHHHHHTEE
T ss_pred HHHHHcCCCcEEEE--EeCC--HHHHHHHHHCCCE
Confidence 88999999999984 4332 2344444443 65
No 288
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.75 E-value=1.6e-05 Score=76.24 Aligned_cols=111 Identities=16% Similarity=0.065 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------CC-CCceEeecCCCChhhHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTAEV 110 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~~-~~v~~~~gDi~~~~~~~~ 110 (249)
+..|||+|||+|..+..+......+....-+...-...+|+|||.++++ .+ ..|++++||+.+.+....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 4689999999999986432221100000000000013599999999853 12 348999999988653110
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv 164 (249)
.-..+++|+|+|-.. |..-..+ +....|..+.+.|||||.++
T Consensus 490 ---~~~~ekVDIIVSElm----Gsfl~nE-----L~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 ---DRGFEQPDIIVSELL----GSFGDNE-----LSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp ---HTTCCCCSEEEECCC----BTTBGGG-----SHHHHHHTTGGGSCTTCEEE
T ss_pred ---cCCCCcccEEEEecc----ccccchh-----ccHHHHHHHHHhCCCCcEEE
Confidence 112478999999753 2111111 11223455578999999876
No 289
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.75 E-value=1.6e-05 Score=67.84 Aligned_cols=94 Identities=10% Similarity=-0.022 Sum_probs=63.3
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CC--CCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PI--EGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~--~~v~~~~gDi~~~~~~~ 109 (249)
.+..+|||||||+|-++..++... +...|+|+|+++-. .. .+..+...|.....
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~-------------p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~--- 194 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLP-------------AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR--- 194 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCC-------------TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC---
T ss_pred CCCceeeeeccCccHHHHHHHhhC-------------CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC---
Confidence 456799999999999998887643 36899999999832 01 23456677776543
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
..+.+|+|++.-...+- + +-...+.-.....|+++|.+|-
T Consensus 195 ------p~~~~DvaL~lkti~~L-----e-----~q~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 195 ------LDEPADVTLLLKTLPCL-----E-----TQQRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp ------CCSCCSEEEETTCHHHH-----H-----HHSTTHHHHHHHHSSCSEEEEE
T ss_pred ------CCCCcchHHHHHHHHHh-----h-----hhhhHHHHHHHHHhCCCCEEEe
Confidence 45789999987532210 0 0011122256789999999885
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.69 E-value=0.00012 Score=63.00 Aligned_cols=70 Identities=16% Similarity=0.199 Sum_probs=54.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----C--CCceEeecCCCChhhHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----I--EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----~--~~v~~~~gDi~~~~~~~~i~ 112 (249)
+++..+||.+||.|+.|..++++ + ++|+|+|.++.+. + ++++++++|..+... +.
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~-~--------------g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~---~L 82 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER-G--------------GRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKR---HL 82 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHH---HH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC-C--------------CEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHH---HH
Confidence 67889999999999999999986 4 7999999998421 2 578999999887542 23
Q ss_pred HhcCCCcccEEEeCC
Q 025715 113 RHFDGCKADLVVCDG 127 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~ 127 (249)
+..+..+||.|+.|.
T Consensus 83 ~~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 83 AALGVERVDGILADL 97 (285)
T ss_dssp HHTTCSCEEEEEEEC
T ss_pred HHcCCCCcCEEEeCC
Confidence 333446899999985
No 291
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.68 E-value=6.1e-05 Score=63.92 Aligned_cols=73 Identities=11% Similarity=-0.007 Sum_probs=50.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++.+|||+|||+|.++. +. +.+ ..+|+|+|+++.. ..++++++++|+.+.+...
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~-~~~-------------~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~- 83 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PV-GER-------------LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGE- 83 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HH-HTT-------------CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHH-
T ss_pred CCcCEEEEECCCCcHHHH-hh-hCC-------------CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHH-
Confidence 578899999999999999 54 322 2349999999731 1247899999998754321
Q ss_pred HHHhcCCCcccEEEeCCCCC
Q 025715 111 VIRHFDGCKADLVVCDGAPD 130 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~ 130 (249)
..+. . +..|.|++|.+..
T Consensus 84 ~~~~-~-~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 84 LAEK-M-GQPLRVFGNLPYN 101 (252)
T ss_dssp HHHH-H-TSCEEEEEECCTT
T ss_pred hhcc-c-CCceEEEECCCCC
Confidence 1100 1 2468999998643
No 292
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.67 E-value=2.6e-05 Score=67.31 Aligned_cols=73 Identities=14% Similarity=0.037 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCC-CCeEEEecCCCCC-----C--CCCceEeecCCCChhhHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGD-LPLIVAIDLQPMA-----P--IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~-~~~vvavDi~~~~-----~--~~~v~~~~gDi~~~~~~~~i 111 (249)
.++.+|||+|||+|.++..++++.. . .++|+|+|+++.. . ..+++++++|+.+.+..
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~------------~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~--- 105 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLA------------TPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG--- 105 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHC------------BTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG---
T ss_pred CCcCEEEEEccccHHHHHHHHHhCC------------CcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh---
Confidence 5788999999999999999998764 1 2459999999732 1 25788999999875421
Q ss_pred HHhcCCC--cccEEEeCCC
Q 025715 112 IRHFDGC--KADLVVCDGA 128 (249)
Q Consensus 112 ~~~~~~~--~~DlVlsD~~ 128 (249)
+.+... ..+.|++|.+
T Consensus 106 -~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 106 -SIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp -GGSCSSSSCCEEEEEECC
T ss_pred -HhcccccCCceEEEEccC
Confidence 111111 3457888764
No 293
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.58 E-value=0.00051 Score=61.57 Aligned_cols=123 Identities=14% Similarity=0.006 Sum_probs=67.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcC-CCC-CCCCCCCCCCCeEEEecCCCCC------CCCC-----------------ce
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYL-PAK-LSPDSREGDLPLIVAIDLQPMA------PIEG-----------------VI 96 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~-~~~-~~~~~~~~~~~~vvavDi~~~~------~~~~-----------------v~ 96 (249)
+.+|+|||||+|..|..+...+-. .+. ........+.-.|+..|+-... .++. .-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 589999999999999876332210 000 0000001245688888876532 0111 01
Q ss_pred EeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCC------------CcC--------HHH-------HHHHHHHH
Q 025715 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH------------DMD--------EFV-------QSQLILAG 149 (249)
Q Consensus 97 ~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~------------~~~--------~~~-------~~~l~~~~ 149 (249)
++.|.-.+. ..+.++.+++|+|+|..+..|.... |.. ++. ..+-....
T Consensus 133 f~~gvpgSF-----y~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~f 207 (374)
T 3b5i_A 133 FVAGVPGSF-----YRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEF 207 (374)
T ss_dssp EEEEEESCT-----TSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhh-----hcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 222211110 0112567899999999887663310 110 110 01123456
Q ss_pred HHHHHHhccCCCEEEEEEec
Q 025715 150 LTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 150 l~~a~~~Lk~gG~lv~k~~~ 169 (249)
|..-.+.|+|||.||+.+..
T Consensus 208 L~~ra~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 208 LRARAAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEEec
Confidence 88888999999999998773
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.50 E-value=0.001 Score=59.52 Aligned_cols=130 Identities=18% Similarity=0.131 Sum_probs=81.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C----------CCCceEeecC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P----------IEGVIQVQGD 101 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~----------~~~v~~~~gD 101 (249)
+..+||=+|.|-|+....+++. + ..+|+.|||++.. . .++++.+.+|
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-------------~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~D 270 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-------------PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 270 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-------------CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-------------CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHH
Confidence 4579999999999999888764 3 2689999999731 0 1246667777
Q ss_pred CCChhhHHHHHHhcCCCcccEEEeCCCCCC-CCCCCcCHHHHHHH-HHHHHHHHHHhccCCCEEEEEEecCCC---HHHH
Q 025715 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDV-TGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRGKD---TSLL 176 (249)
Q Consensus 102 i~~~~~~~~i~~~~~~~~~DlVlsD~~~~~-~g~~~~~~~~~~~l-~~~~l~~a~~~Lk~gG~lv~k~~~~~~---~~~l 176 (249)
.... ++...+ ..++||+|+.|..... .+.. .. ....| ....+..+.+.|+|||.+++..-.... ...+
T Consensus 271 a~~f--l~~~~~--~~~~yDvIIvDl~D~~~s~~p--~g-~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i 343 (381)
T 3c6k_A 271 CIPV--LKRYAK--EGREFDYVINDLTAVPISTSP--EE-DSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLY 343 (381)
T ss_dssp HHHH--HHHHHH--HTCCEEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHH
T ss_pred HHHH--HHhhhh--ccCceeEEEECCCCCcccCcc--cC-cchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHH
Confidence 6432 111111 2357999999974211 1111 11 01122 356688899999999999975433322 2345
Q ss_pred HHHHhcCCCeeEEec
Q 025715 177 YCQLKLFFPVVTFAK 191 (249)
Q Consensus 177 ~~~l~~~f~~v~~~k 191 (249)
...+++.|..|.+..
T Consensus 344 ~~tl~~vF~~v~~~~ 358 (381)
T 3c6k_A 344 EEQLGRLYCPVEFSK 358 (381)
T ss_dssp HHHHTTSSSCEEEEE
T ss_pred HHHHHHhCCcceEee
Confidence 566777888876543
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.49 E-value=0.00014 Score=68.20 Aligned_cols=125 Identities=13% Similarity=0.054 Sum_probs=67.5
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~ 108 (249)
.++.+|+|-|||+|+|...+.+++....+.....+......++|+|+++.. .+....+..+|....+.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~- 294 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPL- 294 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCG-
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCch-
Confidence 467899999999999999887776421100000000012469999998732 12333456677654321
Q ss_pred HHHHHhcCCCcccEEEeCCCCCCCCCC----CcCH-HHHHHHHHHHHHHHHHhcc-------CCCEEEEEEe
Q 025715 109 EVVIRHFDGCKADLVVCDGAPDVTGLH----DMDE-FVQSQLILAGLTVVTHVLK-------EGGKFIAKIF 168 (249)
Q Consensus 109 ~~i~~~~~~~~~DlVlsD~~~~~~g~~----~~~~-~~~~~l~~~~l~~a~~~Lk-------~gG~lv~k~~ 168 (249)
.......+||+|++|+++...... +... ..........+..+.+.|| +||++.+-+.
T Consensus 295 ---~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 295 ---REMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp ---GGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ---hhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 011123579999999876432110 0000 0000011223455556665 7999998654
No 296
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.48 E-value=0.00036 Score=57.29 Aligned_cols=109 Identities=15% Similarity=0.049 Sum_probs=64.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------C---CCCceEeecCCCCh
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P---IEGVIQVQGDITNA 105 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~---~~~v~~~~gDi~~~ 105 (249)
++..+||++|| |. |..+..++. +++|+++|.++.. . ..+++++.||+...
T Consensus 29 ~~a~~VLEiGt--Gy-STl~lA~~~-------------~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~ 92 (202)
T 3cvo_A 29 EEAEVILEYGS--GG-STVVAAELP-------------GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPT 92 (202)
T ss_dssp HHCSEEEEESC--SH-HHHHHHTST-------------TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSB
T ss_pred hCCCEEEEECc--hH-HHHHHHHcC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhh
Confidence 45689999998 44 444433331 4899999998731 2 23577888996542
Q ss_pred ------------hhHHHHHHh---c-CCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEE-e
Q 025715 106 ------------RTAEVVIRH---F-DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI-F 168 (249)
Q Consensus 106 ------------~~~~~i~~~---~-~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~-~ 168 (249)
+....+... . ..++||+|+.|+... . ..+..+.+.|+|||.+++-- .
T Consensus 93 ~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-------~---------~~~~~~l~~l~~GG~Iv~DNv~ 156 (202)
T 3cvo_A 93 GDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-------V---------GCALATAFSITRPVTLLFDDYS 156 (202)
T ss_dssp CGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH-------H---------HHHHHHHHHCSSCEEEEETTGG
T ss_pred hcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc-------h---------hHHHHHHHhcCCCeEEEEeCCc
Confidence 111111111 1 236899999998421 0 12444678999999987631 2
Q ss_pred cCCCHHHHHHHH
Q 025715 169 RGKDTSLLYCQL 180 (249)
Q Consensus 169 ~~~~~~~l~~~l 180 (249)
..+....+..++
T Consensus 157 ~r~~y~~v~~~~ 168 (202)
T 3cvo_A 157 QRRWQHQVEEFL 168 (202)
T ss_dssp GCSSGGGGHHHH
T ss_pred CCcchHHHHHHH
Confidence 233444554443
No 297
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.43 E-value=6.8e-05 Score=63.50 Aligned_cols=69 Identities=19% Similarity=0.155 Sum_probs=50.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------CCCCceEeecCCCChhhHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------~~~~v~~~~gDi~~~~~~~~i~ 112 (249)
.++.+|||+|||+|.++..++++ + ..+|+|+|+++.. ...+++++++|+.+.+..
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~-~-------------~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~---- 91 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQH-P-------------LKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFC---- 91 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTS-C-------------CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGG----
T ss_pred CCcCEEEEEcCchHHHHHHHHHc-C-------------CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChh----
Confidence 46789999999999999999875 2 3699999999721 224688999999875421
Q ss_pred HhcCCCcccEEEeCCCC
Q 025715 113 RHFDGCKADLVVCDGAP 129 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~ 129 (249)
.+. ..+ .|++|.+.
T Consensus 92 -~~~-~~~-~vv~NlPy 105 (249)
T 3ftd_A 92 -SLG-KEL-KVVGNLPY 105 (249)
T ss_dssp -GSC-SSE-EEEEECCT
T ss_pred -Hcc-CCc-EEEEECch
Confidence 111 133 78888754
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.39 E-value=0.00032 Score=61.77 Aligned_cols=73 Identities=19% Similarity=0.136 Sum_probs=56.0
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----C--CCCceEeecCCCChhhHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----P--IEGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----~--~~~v~~~~gDi~~~~~~~~i~ 112 (249)
++|..+||.++|.|+.|..++++++ +.++|+|+|+++.+ . ..++++++++..+... +.
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg------------~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~---~L 120 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLG------------EEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGE---YV 120 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCC------------TTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHH---HH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHH---HH
Confidence 6889999999999999999999876 57899999999842 1 2468889998877432 22
Q ss_pred HhcCC-CcccEEEeCC
Q 025715 113 RHFDG-CKADLVVCDG 127 (249)
Q Consensus 113 ~~~~~-~~~DlVlsD~ 127 (249)
....- +++|.|+.|.
T Consensus 121 ~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 121 AERDLIGKIDGILLDL 136 (347)
T ss_dssp HHTTCTTCEEEEEEEC
T ss_pred HhcCCCCcccEEEECC
Confidence 22221 3699999995
No 299
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.38 E-value=0.0011 Score=59.52 Aligned_cols=123 Identities=13% Similarity=-0.009 Sum_probs=67.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHh----cCCCCCCCCCCCCCCCeEEEecCCCCC------CC--------------CCceE
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKL----YLPAKLSPDSREGDLPLIVAIDLQPMA------PI--------------EGVIQ 97 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~----~~~~~~~~~~~~~~~~~vvavDi~~~~------~~--------------~~v~~ 97 (249)
..+|+||||++|..|..+...+ .............+.-.|+..|+-... .+ .+.-+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 5899999999999999776642 110000000001244678888876321 00 12234
Q ss_pred eecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCC------------cC--------HHHH--------HHHHHHH
Q 025715 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHD------------MD--------EFVQ--------SQLILAG 149 (249)
Q Consensus 98 ~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~------------~~--------~~~~--------~~l~~~~ 149 (249)
+.|.-.+. ..+.|+.+++|+|+|+.+..|..... .. .... .+-....
T Consensus 133 ~~gvpgSF-----y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 133 IGAMPGSF-----YSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp EEECCSCT-----TSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhh-----hhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 44433221 01135678999999998876632210 00 0101 1122445
Q ss_pred HHHHHHhccCCCEEEEEEec
Q 025715 150 LTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 150 l~~a~~~Lk~gG~lv~k~~~ 169 (249)
|..-.+.|+|||.||+.+..
T Consensus 208 L~~Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHhccCCeEEEEEec
Confidence 77778999999999997763
No 300
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.28 E-value=0.00043 Score=61.70 Aligned_cols=118 Identities=13% Similarity=0.032 Sum_probs=68.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHH--------hcCCCCCCCCCCCCCCCeEEEecCCCCC------CCC------CceEeec
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRK--------LYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE------GVIQVQG 100 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~--------~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~------~v~~~~g 100 (249)
...+|+||||++|..|..+... .... +. +..+.-.|+..|+-... .++ +.-++.|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~----~~-~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~g 125 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKM----GR-ENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFING 125 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSS----SC-SSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEE
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhc----CC-CCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEe
Confidence 4578999999999888754322 1100 00 01245688899986532 222 2234444
Q ss_pred CCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCC-----CC---------------cCH--HHHHHHHHHHHHHHHHhcc
Q 025715 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGL-----HD---------------MDE--FVQSQLILAGLTVVTHVLK 158 (249)
Q Consensus 101 Di~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~-----~~---------------~~~--~~~~~l~~~~l~~a~~~Lk 158 (249)
.-.+. ...-|+.+++|+|+|+.+..|... .+ .+. ....+-....|..-.+.|+
T Consensus 126 vpgSF-----y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~ 200 (359)
T 1m6e_X 126 VPGSF-----YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV 200 (359)
T ss_dssp EESCS-----SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC
T ss_pred cchhh-----hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 32221 001256789999999987665321 00 001 1112234556788889999
Q ss_pred CCCEEEEEEe
Q 025715 159 EGGKFIAKIF 168 (249)
Q Consensus 159 ~gG~lv~k~~ 168 (249)
|||.||+.+.
T Consensus 201 pGG~mvl~~~ 210 (359)
T 1m6e_X 201 PGGRMVLTIL 210 (359)
T ss_dssp TTCEEEEEEE
T ss_pred CCceEEEEEe
Confidence 9999999776
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.04 E-value=0.00094 Score=59.88 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=61.6
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHH-hc
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR-HF 115 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~-~~ 115 (249)
.+|+||+||.|+++..+.+. + --.|.++|+++.+ -.++..++++||.+.... .+.. .+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G-------------~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~-~~~~~~~ 67 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G-------------FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAE-IIKGFFK 67 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T-------------CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHH-HHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHC-C-------------CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHH-HHHhhcc
Confidence 58999999999999888765 3 1357799999854 145677889999876432 2221 22
Q ss_pred CCCcccEEEeCCCCCC---CCCCCcCHHHHHHHHHHHHHHHHHhccCC
Q 025715 116 DGCKADLVVCDGAPDV---TGLHDMDEFVQSQLILAGLTVVTHVLKEG 160 (249)
Q Consensus 116 ~~~~~DlVlsD~~~~~---~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g 160 (249)
....+|+|+.+++++. .|.+..+..+ ..|....++. .+.++|.
T Consensus 68 ~~~~~D~i~ggpPCQ~fS~ag~~~~~d~r-~~L~~~~~~~-v~~~~P~ 113 (376)
T 3g7u_A 68 NDMPIDGIIGGPPCQGFSSIGKGNPDDSR-NQLYMHFYRL-VSELQPL 113 (376)
T ss_dssp SCCCCCEEEECCCCCTTC-------CHHH-HHHHHHHHHH-HHHHCCS
T ss_pred cCCCeeEEEecCCCCCcccccCCCCCCch-HHHHHHHHHH-HHHhCCC
Confidence 4468999999875432 2322222222 2344444443 4557885
No 302
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.89 E-value=0.0029 Score=54.51 Aligned_cols=98 Identities=15% Similarity=0.047 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------------------------
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------------------- 90 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------------------------- 90 (249)
...||++|++.|.-+..++..+.... .++++|+++|...-.
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g--------~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar 178 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHD--------VRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVR 178 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTT--------CCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHH
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcC--------CCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHH
Confidence 45999999999999988877653100 025789999975310
Q ss_pred ------CC--CCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCE
Q 025715 91 ------PI--EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (249)
Q Consensus 91 ------~~--~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~ 162 (249)
.+ ++++++.||+.+ + ...+..+++|+|..|+.. .+. ....++.+...|+|||.
T Consensus 179 ~n~~~~gl~~~~I~li~Gda~e--t----L~~~~~~~~d~vfIDaD~-------y~~------~~~~Le~~~p~L~pGGi 239 (282)
T 2wk1_A 179 RNFRNYDLLDEQVRFLPGWFKD--T----LPTAPIDTLAVLRMDGDL-------YES------TWDTLTNLYPKVSVGGY 239 (282)
T ss_dssp HHHHHTTCCSTTEEEEESCHHH--H----STTCCCCCEEEEEECCCS-------HHH------HHHHHHHHGGGEEEEEE
T ss_pred HHHHHcCCCcCceEEEEeCHHH--H----HhhCCCCCEEEEEEcCCc-------ccc------HHHHHHHHHhhcCCCEE
Confidence 11 457788888743 1 112344689999999721 011 23567888999999998
Q ss_pred EEEE
Q 025715 163 FIAK 166 (249)
Q Consensus 163 lv~k 166 (249)
+++-
T Consensus 240 Iv~D 243 (282)
T 2wk1_A 240 VIVD 243 (282)
T ss_dssp EEES
T ss_pred EEEc
Confidence 8863
No 303
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=96.55 E-value=0.0083 Score=59.83 Aligned_cols=98 Identities=15% Similarity=0.080 Sum_probs=71.2
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe-cCC-CHHHHHHHHhcCCCeeEEecC
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF-RGK-DTSLLYCQLKLFFPVVTFAKP 192 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~-~~~-~~~~l~~~l~~~f~~v~~~kP 192 (249)
++.+.|.+|.||.--...|. .|-..+.+...+++..++++..+||.+|+|+- ... -...+...+..+|..+.+.||
T Consensus 570 ~pTGtf~fVYSDVDQV~d~~--~Dl~As~r~~~~~l~~~l~~ts~GG~~v~KiNFPT~~vw~~if~~~~~~~~~~~i~KP 647 (1299)
T 3iyl_W 570 VPTGTFGLVYADLDQVEDAG--TDMPAANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHATTLHLVKP 647 (1299)
T ss_dssp CCCCCEEEEEECCCCC-------CCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCTTHHHHHHHHTTTTCSCEEEEEC
T ss_pred CCCCceEEEEecchhhccCC--cchhhhhHHHHHHHHHHHHhhcCCceEEEEEcCCchHHHHHHHHHhcchhheeeeecc
Confidence 56789999999963222222 23234556677889999999999999999985 332 255677777778999999999
Q ss_pred CCCCCCCceEEEEEeeccCCCCCC
Q 025715 193 KSSRNSSIEAFAVCENYFPPEGFN 216 (249)
Q Consensus 193 ~~sr~~s~E~y~v~~g~~~~~~~~ 216 (249)
.-.+ |.|+|++.-|.......-
T Consensus 648 li~N--nvEvf~v~~~r~~~~~l~ 669 (1299)
T 3iyl_W 648 TIVN--SSEVFLVFGGRQSNGALR 669 (1299)
T ss_dssp CSSS--CCCEEEEESCCCTTCCCC
T ss_pred eeec--ceEEEEEEeeecccCCCC
Confidence 8764 689999988877555444
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.00 E-value=0.0075 Score=51.93 Aligned_cols=70 Identities=14% Similarity=0.013 Sum_probs=43.3
Q ss_pred CCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCc---C------HHHHHHHHHHHHHHHHHhccCCCEE
Q 025715 93 EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDM---D------EFVQSQLILAGLTVVTHVLKEGGKF 163 (249)
Q Consensus 93 ~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~---~------~~~~~~l~~~~l~~a~~~Lk~gG~l 163 (249)
..+++++||..+. .+.+++++||+|++|++......... + ...-...+...+..+.++|||||.+
T Consensus 20 ~~~~i~~gD~~~~------l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 20 GVHRLHVGDAREV------LASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp -CEEEEESCHHHH------HTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cCCEEEECcHHHH------HhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 3567889998652 23356679999999986532211100 0 0111223456788999999999999
Q ss_pred EEEEe
Q 025715 164 IAKIF 168 (249)
Q Consensus 164 v~k~~ 168 (249)
++.+-
T Consensus 94 ~i~~~ 98 (297)
T 2zig_A 94 VIVVG 98 (297)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88643
No 305
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.89 E-value=0.0037 Score=55.18 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=48.3
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------CCCceEeecCCCChhhHHHHHHhcC
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
.+|+||+||.|+++..+..... .-..|+++|+++.+. .++..++.+|+.+.... .+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~------------~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~-~~~---- 65 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCI------------PAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLE-EFD---- 65 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTC------------SEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHH-HHH----
T ss_pred CeEEEeCcCccHHHHHHHHCCC------------CceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHh-HcC----
Confidence 5899999999999998876521 013689999998531 34555678999875421 121
Q ss_pred CCcccEEEeCCCC
Q 025715 117 GCKADLVVCDGAP 129 (249)
Q Consensus 117 ~~~~DlVlsD~~~ 129 (249)
...+|+|+.++++
T Consensus 66 ~~~~D~l~~gpPC 78 (343)
T 1g55_A 66 RLSFDMILMSPPC 78 (343)
T ss_dssp HHCCSEEEECCC-
T ss_pred cCCcCEEEEcCCC
Confidence 1269999998764
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.79 E-value=0.023 Score=50.40 Aligned_cols=54 Identities=15% Similarity=0.068 Sum_probs=43.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CCCCceEeecCCCChhh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNART 107 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~~~v~~~~gDi~~~~~ 107 (249)
++..||++|.|+|++|..++++.. ..+|+++++.+.. ..++++.+.+|+.+.+.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-------------~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~~ 119 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-------------PRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWST 119 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-------------CSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-------------CCEEEEEecCHHHHHHHHHhccCCCEEEEECCccchhh
Confidence 468999999999999999998753 2589999998621 23578999999988753
No 307
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.76 E-value=0.013 Score=51.25 Aligned_cols=70 Identities=17% Similarity=0.163 Sum_probs=46.1
Q ss_pred CceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCC--CC-CcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEec
Q 025715 94 GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTG--LH-DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (249)
Q Consensus 94 ~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g--~~-~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~ 169 (249)
...+++||..+. .+.+++++||+|++|++..... .+ +.....-.......+..+.++|+|||.+++.+-.
T Consensus 14 ~~~ii~gD~~~~------l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 14 NGSMYIGDSLEL------LESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SEEEEESCHHHH------GGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEEeCcHHHH------HhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 456788887542 2345678999999998754331 11 1112222344567888899999999999986543
No 308
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=95.71 E-value=0.025 Score=56.19 Aligned_cols=112 Identities=21% Similarity=0.193 Sum_probs=80.8
Q ss_pred EeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC--CHH
Q 025715 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--DTS 174 (249)
Q Consensus 97 ~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~--~~~ 174 (249)
..+|-|.|.. ..++.+.|-+|.||.--...|. .|-..+.+...+.+..++++..+||.+|+|+--+- -..
T Consensus 554 V~~G~I~D~~------~p~pTGtf~fVYSDvDQV~dgg--~Dl~Aasr~~~~~l~~~l~~tt~GG~~VvKiNFPT~~~W~ 625 (1289)
T 1ej6_A 554 VARGAIVDLA------RPFPSGDYQFVYSDVDQVVDGH--DDLSISSGLVESLLSSCMHATAPGGSFVVKINFPTRPVWH 625 (1289)
T ss_dssp CSSSBCCCTT------SCCSCCCEEEEEECCCCCCSSS--TTHHHHHHHHHHHHHHHHHHEEEEEEEEEEESSCCHHHHH
T ss_pred eccceeeeee------ccCCCcceEEEEechhhhhcCC--CcchhhHHHHHHHHHHHHHhhccCceEEEEEcCCChHHHH
Confidence 3456555543 2356789999999974323333 34445566778899999999999999999985332 234
Q ss_pred HHHHHHhcCCCeeEEecCCCCCCCCceEEEEEeeccCCCCCCch
Q 025715 175 LLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYFPPEGFNPK 218 (249)
Q Consensus 175 ~l~~~l~~~f~~v~~~kP~~sr~~s~E~y~v~~g~~~~~~~~~~ 218 (249)
.+......+|...+++||.-.+ |.|.|+++-|.....+..++
T Consensus 626 ~lf~~~~~~~~s~~lvKP~IvN--nvEvflv~~~r~~~g~l~~t 667 (1289)
T 1ej6_A 626 YIEQKILPNITSYMLIKPFVTN--NVELFFVAFGVHQHSSLTWT 667 (1289)
T ss_dssp HHHHHTGGGEEEEEEEEEESSS--SCCEEEEEEEESCCCCCCBC
T ss_pred HHHHhhccccceeeeecceeec--ceEEEEEEEeeecCCCCCCc
Confidence 5555556678999999997754 68999999999987777754
No 309
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=95.53 E-value=0.14 Score=40.00 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=67.3
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----CCCCceEeecCCCChhhHHHHHHhcCCC
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDGC 118 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----~~~~v~~~~gDi~~~~~~~~i~~~~~~~ 118 (249)
.-|||||-|.|---.++.+.++ +..|+++|..-.. ..+.-.+++||+.+ ++......|+ .
T Consensus 42 GpVlElGLGNGRTydHLRe~~P-------------~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~--tL~~~~~r~g-~ 105 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQ-------------GREIYVFERAVASHPDSTPPEAQLILGDIRE--TLPATLERFG-A 105 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCC-------------SSCEEEEESSCCCCGGGCCCGGGEEESCHHH--HHHHHHHHHC-S
T ss_pred CceEEecCCCChhHHHHHHhCC-------------CCcEEEEEeeeccCCCCCCchHheecccHHH--HHHHHHHhcC-C
Confidence 4899999999999999999985 6799999986432 12334578999865 3333334454 6
Q ss_pred cccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 119 KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 119 ~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+.-++.+|... |.+..+. .....+--.+-.+|.|||.+|.
T Consensus 106 ~a~LaHaD~G~---g~~~~d~----a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 106 TASLVHADLGG---HNREKND----RFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp CEEEEEECCCC---SCHHHHH----HHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceEEEEeecCC---CCcchhH----HHHHhhhHHHHHHhcCCcEEEe
Confidence 89999999742 3222221 1112223345679999998775
No 310
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=95.19 E-value=0.5 Score=38.66 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=72.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCcc
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~ 120 (249)
.++++|=.|+ .|++...+++++... ....|+..|.++......+.++.+|+++.+....+.+.+..+.+
T Consensus 3 ~~k~vlITGa-s~gIG~~~a~~l~~~----------~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGG-SKGIGKAVVELLLQN----------KNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp CCEEEEEETT-TSHHHHHHHHHHTTS----------TTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEeCC-CChHHHHHHHHHHhc----------CCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence 3456776674 577888888777521 13578888988764456778899999998877776665655689
Q ss_pred cEEEeCCCCCCC-CCCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 121 DLVVCDGAPDVT-GLHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 121 DlVlsD~~~~~~-g~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
|+++.+...... ...+.+... ..+. ....++.+...++++|+++..
T Consensus 72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~ 125 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFN 125 (244)
T ss_dssp EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEE
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEE
Confidence 999999754321 112222211 1111 123344555666778887763
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.16 E-value=0.024 Score=50.65 Aligned_cols=105 Identities=18% Similarity=0.163 Sum_probs=58.9
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhh-HHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNART-AEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~-~~~i~ 112 (249)
+++|.+||-+|+|+ |.....+++..+ ..+|+++|.++.+. --|...+ |..+.+. .+.+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~ 247 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLG-------------AACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQID 247 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHH
Confidence 47899999999866 555556666665 23899999886421 1244333 3333222 33344
Q ss_pred HhcCCCcccEEEeCCCCCCCCC----CCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGL----HDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~----~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+...+..+|+|+--..-...+. ...+. ...+..+.++|++||++++
T Consensus 248 ~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 248 QILGKPEVDCGVDAVGFEAHGLGDEANTETP-------NGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp HHHSSSCEEEEEECSCTTCBCSGGGTTSBCT-------THHHHHHHHHEEEEEEEEC
T ss_pred HHhCCCCCCEEEECCCCcccccccccccccc-------HHHHHHHHHHHhcCCEEEE
Confidence 3334447999985321110000 00000 0246678899999999886
No 312
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.98 E-value=0.015 Score=49.96 Aligned_cols=35 Identities=20% Similarity=0.081 Sum_probs=29.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~ 89 (249)
.+|..|||++||+|..+.++++. + .+++|+|+++.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~-g--------------~~~~g~e~~~~ 268 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW-G--------------RRALGVELVPR 268 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T--------------CEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C--------------CeEEEEeCCHH
Confidence 57899999999999999887753 3 58999999983
No 313
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.86 E-value=0.047 Score=45.89 Aligned_cols=66 Identities=11% Similarity=0.040 Sum_probs=42.8
Q ss_pred eEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCC-C-Cc-CHHHHHHHHHHHHHHHHHhccCCCEEEEEE
Q 025715 96 IQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGL-H-DM-DEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 96 ~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~-~-~~-~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+.++||..+ ..+.+.+++||+|+.|++...... + +. ....-.......+..+.++|+|||.+++.+
T Consensus 6 ~l~~gD~~~------~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 6 KIHQMNCFD------FLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SEEECCHHH------HHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEechHHH------HHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 467888654 223456679999999987543211 1 01 222223455677888899999999998854
No 314
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.73 E-value=0.047 Score=47.14 Aligned_cols=145 Identities=13% Similarity=0.065 Sum_probs=80.9
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCe-EEEecCCCCC------CCCCceEeecCCCChhhHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~-vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~ 112 (249)
+.+.+|+||.||.||++..+.+. +. ... |.++|+++.+ -.++...+.+||++... ..+.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~------------~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~-~~i~ 79 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GI------------QVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQ-KHIQ 79 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TB------------CEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCH-HHHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CC------------ccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccH-HHhc
Confidence 45679999999999999887653 31 122 6899998853 13455577899987643 2222
Q ss_pred HhcCCCcccEEEeCCCCC---CCC-CC-CcCHHHHHHHHHHHHHHHHHhccCC-C-----EEEEEEecCCC---HHHHHH
Q 025715 113 RHFDGCKADLVVCDGAPD---VTG-LH-DMDEFVQSQLILAGLTVVTHVLKEG-G-----KFIAKIFRGKD---TSLLYC 178 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~---~~g-~~-~~~~~~~~~l~~~~l~~a~~~Lk~g-G-----~lv~k~~~~~~---~~~l~~ 178 (249)
+ + ..+|+++..++++ ..| .+ ..+..+ ..|....++. .+.++|. | .+++.=-.+.. ...+..
T Consensus 80 ~-~--~~~Dll~ggpPCQ~fS~ag~~r~g~~d~r-~~L~~~~~ri-i~~~~P~~~~~~P~~~l~ENV~gl~~~~~~~~~~ 154 (295)
T 2qrv_A 80 E-W--GPFDLVIGGSPCNDLSIVNPARKGLYEGT-GRLFFEFYRL-LHDARPKEGDDRPFFWLFENVVAMGVSDKRDISR 154 (295)
T ss_dssp H-T--CCCSEEEECCCCGGGBTTCTTCCTTTSTT-TTHHHHHHHH-HHHHSCCTTCCCCCEEEEEEESSBCHHHHHHHHH
T ss_pred c-c--CCcCEEEecCCCccccccCcccccccccc-chhHHHHHHH-HHHhCcccccCCccEEEEEcCcchhhcCccHHHH
Confidence 2 1 4699999876543 223 11 111111 1233334443 4566776 3 56654222211 123545
Q ss_pred HHhcCCCeeEEecCCCCCCCCceEEEEE
Q 025715 179 QLKLFFPVVTFAKPKSSRNSSIEAFAVC 206 (249)
Q Consensus 179 ~l~~~f~~v~~~kP~~sr~~s~E~y~v~ 206 (249)
.++..+..+... -. . +.++++++++
T Consensus 155 ~l~~~~~vl~a~-~~-~-PQ~R~R~~i~ 179 (295)
T 2qrv_A 155 FLESNPVMIDAK-EV-S-AAHRARYFWG 179 (295)
T ss_dssp HHTSCCCCEEGG-GT-S-SBCCEEEEEE
T ss_pred HHhcCcEEeecc-eE-C-CccCcEEEEE
Confidence 555444433322 22 3 7778988873
No 315
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.61 E-value=0.065 Score=42.58 Aligned_cols=96 Identities=21% Similarity=0.170 Sum_probs=56.8
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
+++|++||-.|++ |+....+.+.... ...+|+++|.++... -.+... ..|..+.+..+.+.+.
T Consensus 36 ~~~g~~vlV~Ga~-ggiG~~~~~~~~~-----------~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 36 LSPGERVLIHSAT-GGVGMAAVSIAKM-----------IGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILEL 102 (198)
T ss_dssp CCTTCEEEETTTT-SHHHHHHHHHHHH-----------HTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHH
T ss_pred CCCCCEEEEeeCC-ChHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHH
Confidence 4688999999853 4444444332210 126899999875321 112221 1255554444555544
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
.....+|+|+.... . ..+..+.+.|++||++++
T Consensus 103 ~~~~~~D~vi~~~g-----~-------------~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 103 TDGYGVDVVLNSLA-----G-------------EAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp TTTCCEEEEEECCC-----T-------------HHHHHHHHTEEEEEEEEE
T ss_pred hCCCCCeEEEECCc-----h-------------HHHHHHHHHhccCCEEEE
Confidence 44457999996532 1 135667899999999987
No 316
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.58 E-value=0.064 Score=47.22 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=56.8
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||-+|+|+ |.....+++..+ ..+|+++|.++.+. . -+.. .+ |..+.+..+.+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~~~~ 252 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-------------ASIIIAVDIVESRLELAKQLGATHVI--NSKTQDPVAAIK 252 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-------------CSEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEECCCHHHHHHHHHcCCCEEe--cCCccCHHHHHH
Confidence 36899999999765 445555666654 13799999876431 0 1221 22 222222333444
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+... +.+|+|+-. .|. ...+..+.++|++||++++-
T Consensus 253 ~~~~-gg~D~vid~-----~g~------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 253 EITD-GGVNFALES-----TGS------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp HHTT-SCEEEEEEC-----SCC------------HHHHHHHHHTEEEEEEEEEC
T ss_pred HhcC-CCCcEEEEC-----CCC------------HHHHHHHHHHHhcCCEEEEe
Confidence 4333 379999853 221 12467788999999999873
No 317
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.53 E-value=0.074 Score=46.16 Aligned_cols=121 Identities=18% Similarity=0.234 Sum_probs=67.4
Q ss_pred CCCeEEEEcCCCChHHHHHHH---HhcCCCCCCCCCCCCCCCeEEEecCCCCCCC------------------C-----C
Q 025715 41 GVKRVVDLCAAPGSWSQVLSR---KLYLPAKLSPDSREGDLPLIVAIDLQPMAPI------------------E-----G 94 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~---~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~------------------~-----~ 94 (249)
+..+|||+|-|+|--.....+ ..... ...+++++|..+.... + +
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~----------~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~ 165 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPK----------LRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGER 165 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTT----------CEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSS
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCC----------cceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCc
Confidence 346899999999986544332 22210 1235678887654210 1 1
Q ss_pred --ceEeecCCCChhhHHHHHHhcCCCcccEEEeCCC-CCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCC
Q 025715 95 --VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGA-PDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (249)
Q Consensus 95 --v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~-~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~ 171 (249)
+++..||+.+ ....+...++|+|..|+. |.. |.+-+. ...+....++++|||+|+. +...
T Consensus 166 v~L~l~~GDa~~------~l~~l~~~~~Da~flDgFsP~k----NPeLWs-----~e~f~~l~~~~~pgg~laT--Ytaa 228 (308)
T 3vyw_A 166 LSLKVLLGDARK------RIKEVENFKADAVFHDAFSPYK----NPELWT-----LDFLSLIKERIDEKGYWVS--YSSS 228 (308)
T ss_dssp EEEEEEESCHHH------HGGGCCSCCEEEEEECCSCTTT----SGGGGS-----HHHHHHHHTTEEEEEEEEE--SCCC
T ss_pred EEEEEEechHHH------HHhhhcccceeEEEeCCCCccc----CcccCC-----HHHHHHHHHHhCCCcEEEE--EeCc
Confidence 1234555532 222345557999999983 332 222111 2467888999999999884 4332
Q ss_pred CHHHHHHHHhcC-CCeeEEec
Q 025715 172 DTSLLYCQLKLF-FPVVTFAK 191 (249)
Q Consensus 172 ~~~~l~~~l~~~-f~~v~~~k 191 (249)
..+...|... |. |.-.+
T Consensus 229 --g~VRR~L~~aGF~-V~k~~ 246 (308)
T 3vyw_A 229 --LSVRKSLLTLGFK-VGSSR 246 (308)
T ss_dssp --HHHHHHHHHTTCE-EEEEE
T ss_pred --HHHHHHHHHCCCE-EEecC
Confidence 2344445543 65 44443
No 318
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.45 E-value=0.025 Score=49.71 Aligned_cols=70 Identities=14% Similarity=0.241 Sum_probs=47.6
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------CCCceEeecCCCChhhHHHHHHhcC
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
.+|+||+||.||++..+.+. +. .--.|.|+|+++.+. .++...+.+||.+... ..+.
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~-----------~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~-~~~~---- 66 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GL-----------DGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTP-QVIK---- 66 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TC-----------SEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCH-HHHH----
T ss_pred CEEEEECcCccHHHHHHHHc-CC-----------CceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCH-HHhc----
Confidence 48999999999999888654 20 012577999998541 3455567899987643 1222
Q ss_pred CCcccEEEeCCCC
Q 025715 117 GCKADLVVCDGAP 129 (249)
Q Consensus 117 ~~~~DlVlsD~~~ 129 (249)
...+|+++..+++
T Consensus 67 ~~~~D~l~ggpPC 79 (333)
T 4h0n_A 67 KWNVDTILMSPPC 79 (333)
T ss_dssp HTTCCEEEECCCC
T ss_pred cCCCCEEEecCCC
Confidence 2369999987644
No 319
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.39 E-value=0.091 Score=45.99 Aligned_cols=95 Identities=20% Similarity=0.262 Sum_probs=55.9
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCce-EeecCCC---ChhhHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVI-QVQGDIT---NARTAE 109 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~-~~~gDi~---~~~~~~ 109 (249)
+++|.+||-.|+|+ |.....+++.++ ..+|+++|.++.+. --|.. .+ |.. +.+..+
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~~~~ 233 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMG-------------AAQVVVTDLSATRLSKAKEIGADLVL--QISKESPQEIAR 233 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCSEEE--ECSSCCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHhCCCEEE--cCcccccchHHH
Confidence 46899999999754 344444555544 13899999876421 01221 22 222 123334
Q ss_pred HHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+... +.+|+|+-. .|. . ..+..+.++|++||++++-
T Consensus 234 ~i~~~~~-~g~D~vid~-----~g~----~--------~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 234 KVEGQLG-CKPEVTIEC-----TGA----E--------ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHHT-SCCSEEEEC-----SCC----H--------HHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHhC-CCCCEEEEC-----CCC----h--------HHHHHHHHHhcCCCEEEEE
Confidence 4444333 579999853 221 1 2456778999999999873
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.37 E-value=0.19 Score=43.89 Aligned_cols=98 Identities=18% Similarity=0.225 Sum_probs=57.1
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----CC-CCceEeecCCCC-hhhHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PI-EGVIQVQGDITN-ARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----~~-~~v~~~~gDi~~-~~~~~~ 110 (249)
+++|++||=.|+|+ |.....+++..+ ...|+++|.++.+ .+ +.+.....|-.+ .+..+.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 243 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAG-------------ACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKK 243 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTT-------------CCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHH
Confidence 47899999998743 333334455544 1249999987632 11 122122222222 333444
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+.+...+..+|+|+-- .|. . ..+..+.++|++||++++-
T Consensus 244 v~~~t~g~g~Dvvid~-----~g~----~--------~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 244 IVESFGGIEPAVALEC-----TGV----E--------SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHHTSSCCCSEEEEC-----SCC----H--------HHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhCCCCCCEEEEC-----CCC----h--------HHHHHHHHHhcCCCEEEEE
Confidence 5554555689999852 221 1 2466788999999999974
No 321
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.24 E-value=0.031 Score=48.94 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=45.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------CCCceEeecCCCChhhHHHHHHhc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIRHF 115 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~~~v~~~~gDi~~~~~~~~i~~~~ 115 (249)
+.+|+||+||.|+++..+... + -..|.++|+++.+. .+.. ..+|+++... +.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-------------~~~v~~~e~d~~a~~t~~~N~~~~--~~~Di~~~~~-----~~~ 69 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-------------AECVYSNEWDKYAQEVYEMNFGEK--PEGDITQVNE-----KTI 69 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-------------CEEEEEECCCHHHHHHHHHHHSCC--CBSCGGGSCG-----GGS
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-------------CeEEEEEeCCHHHHHHHHHHcCCC--CcCCHHHcCH-----hhC
Confidence 479999999999999888754 3 14688999998531 1222 2688876432 122
Q ss_pred CCCcccEEEeCCCCC
Q 025715 116 DGCKADLVVCDGAPD 130 (249)
Q Consensus 116 ~~~~~DlVlsD~~~~ 130 (249)
..+|+|+.+++++
T Consensus 70 --~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 70 --PDHDILCAGFPCQ 82 (327)
T ss_dssp --CCCSEEEEECCCT
T ss_pred --CCCCEEEECCCCC
Confidence 2599999987543
No 322
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.14 E-value=0.064 Score=46.40 Aligned_cols=64 Identities=16% Similarity=0.227 Sum_probs=44.7
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------CCCceEeecCCCChhhHHHHHHhcC
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
++||||.||.||++..+.+. + --.|.|+|+++.+. .+ -..+.+||++... +.+
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G-------------~~~v~a~e~d~~a~~ty~~N~~-~~~~~~DI~~i~~-----~~~- 59 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G-------------FRIICANEYDKSIWKTYESNHS-AKLIKGDISKISS-----DEF- 59 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T-------------CEEEEEEECCTTTHHHHHHHCC-SEEEESCGGGCCG-----GGS-
T ss_pred CeEEEeCcCccHHHHHHHHC-C-------------CEEEEEEeCCHHHHHHHHHHCC-CCcccCChhhCCH-----hhC-
Confidence 58999999999999887643 3 13567999998752 22 3567899987542 123
Q ss_pred CCcccEEEeCCC
Q 025715 117 GCKADLVVCDGA 128 (249)
Q Consensus 117 ~~~~DlVlsD~~ 128 (249)
..+|+++.-++
T Consensus 60 -~~~D~l~ggpP 70 (331)
T 3ubt_Y 60 -PKCDGIIGGPP 70 (331)
T ss_dssp -CCCSEEECCCC
T ss_pred -CcccEEEecCC
Confidence 36999986543
No 323
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.03 E-value=0.38 Score=42.35 Aligned_cols=95 Identities=17% Similarity=0.103 Sum_probs=56.4
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCce-EeecCCC--ChhhHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVI-QVQGDIT--NARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~-~~~gDi~--~~~~~~~ 110 (249)
+++|.+||=+|+|+ |.....+++..+ ..+|+++|.++.+. --|.. .+ |.. +.+..+.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~~~~ 255 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG-------------ASRIIGIDIDSKKYETAKKFGVNEFV--NPKDHDKPIQEV 255 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT-------------CSCEEEECSCTTHHHHHHTTTCCEEE--CGGGCSSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHcCCcEEE--ccccCchhHHHH
Confidence 46899999999753 333444555554 23899999887541 11221 12 222 2223334
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~k 166 (249)
+.+... +.+|+|+-- .|. ...+..+.++|++| |++++-
T Consensus 256 i~~~~~-gg~D~vid~-----~g~------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 256 IVDLTD-GGVDYSFEC-----IGN------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHHTT-SCBSEEEEC-----SCC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhcC-CCCCEEEEC-----CCC------------HHHHHHHHHHhhccCCEEEEE
Confidence 444333 489999852 221 12567788999997 999873
No 324
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.00 E-value=0.04 Score=48.29 Aligned_cols=72 Identities=7% Similarity=0.132 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeE-EEecCCCCCC------CCCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLI-VAIDLQPMAP------IEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~v-vavDi~~~~~------~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
...+|+||+||.||++..+.+. +. .--.| .|+|+++.+. .+.. .+++||.+... ..+.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~a-G~-----------~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~-~~i~- 73 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERS-SI-----------NINATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISI-KQIE- 73 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHS-SC-----------CCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCH-HHHH-
T ss_pred CCCEEEEECCChhHHHHHHHHc-CC-----------CceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCH-HHhc-
Confidence 4579999999999999887653 20 01245 6999998541 2333 57899988653 2222
Q ss_pred hcCCCcccEEEeCCCCC
Q 025715 114 HFDGCKADLVVCDGAPD 130 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~ 130 (249)
...+|+++..++++
T Consensus 74 ---~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 74 ---SLNCNTWFMSPPCQ 87 (327)
T ss_dssp ---HTCCCEEEECCCCT
T ss_pred ---cCCCCEEEecCCcc
Confidence 13699999866543
No 325
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.91 E-value=0.11 Score=45.28 Aligned_cols=95 Identities=16% Similarity=0.206 Sum_probs=54.6
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCce-EeecCCCC-hhhHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVI-QVQGDITN-ARTAEVV 111 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~-~~~gDi~~-~~~~~~i 111 (249)
+++|.+||-.|+|+ |.....+++.++ .+|+++|.++.+. --+.. .+ |..+ .+..+.+
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~~~--~~~~~~~~~~~i 229 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYG--------------AFVVCTARSPRRLEVAKNCGADVTL--VVDPAKEEESSI 229 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESCHHHHHHHHHTTCSEEE--ECCTTTSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEcCCHHHHHHHHHhCCCEEE--cCcccccHHHHH
Confidence 46899999999643 333333444443 5799999876321 01221 22 2222 2233344
Q ss_pred HHhcC---CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 112 IRHFD---GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 112 ~~~~~---~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+... +..+|+|+-.. |. . ..+..+.++|+++|++++-
T Consensus 230 ~~~~~~~~g~g~D~vid~~-----g~----~--------~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 230 IERIRSAIGDLPNVTIDCS-----GN----E--------KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHHHHHSSSCCSEEEECS-----CC----H--------HHHHHHHHHSCTTCEEEEC
T ss_pred HHHhccccCCCCCEEEECC-----CC----H--------HHHHHHHHHHhcCCEEEEE
Confidence 43332 35799998532 21 1 2456778999999999873
No 326
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.81 E-value=0.085 Score=46.90 Aligned_cols=105 Identities=18% Similarity=0.136 Sum_probs=57.7
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChh-hHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNAR-TAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~-~~~~i~ 112 (249)
+++|.+||-.|+|+ |.+...+++.++ ..+|+++|.++.+. --|...+ |..+.+ ..+.+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~v~ 247 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG-------------AAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIA 247 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCEEE--ETTSSSCHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-------------CCeEEEEcCCHHHHHHHHHcCCcEE--ccCCcchHHHHHH
Confidence 47899999999654 444445555554 23799999887431 1244333 322222 233444
Q ss_pred HhcCCCcccEEEeCCCCCCCC-----CCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTG-----LHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g-----~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+...+..+|+|+-.......+ ....+. ...+..+.++|++||++++
T Consensus 248 ~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 248 ALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP-------ATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp HHHSSSCEEEEEECCCTTCBCSSTTGGGSBCT-------THHHHHHHHHEEEEEEEEE
T ss_pred HHhCCCCCCEEEECCCCcccccccccccccch-------HHHHHHHHHHHhcCCEEEE
Confidence 333445799998543211000 000000 0246678899999999986
No 327
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.79 E-value=0.09 Score=45.90 Aligned_cols=96 Identities=20% Similarity=0.177 Sum_probs=56.4
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-C---CCce-EeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-I---EGVI-QVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-~---~~v~-~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||=.|+|+ |..+..+++..+ ..+|+++|.++.+. + -|.. .+ |..+.+..+.+.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~v~ 228 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLG-------------AGRIFAVGSRKHCCDIALEYGATDII--NYKNGDIVEQIL 228 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTT-------------CSSEEEECCCHHHHHHHHHHTCCEEE--CGGGSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CcEEEEECCCHHHHHHHHHhCCceEE--cCCCcCHHHHHH
Confidence 47899999998643 333333444433 23799999876421 0 1221 22 222333444555
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+...+..+|+|+-- .|.. ..+..+.++|++||++++-
T Consensus 229 ~~t~g~g~D~v~d~-----~g~~------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 229 KATDGKGVDKVVIA-----GGDV------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HHTTTCCEEEEEEC-----SSCT------------THHHHHHHHEEEEEEEEEC
T ss_pred HHcCCCCCCEEEEC-----CCCh------------HHHHHHHHHHhcCCEEEEe
Confidence 54555579999852 2211 1466788999999999863
No 328
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.56 E-value=0.039 Score=48.09 Aligned_cols=65 Identities=14% Similarity=0.109 Sum_probs=41.9
Q ss_pred eEe-ecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCC-CCCC-cCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 96 IQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVT-GLHD-MDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 96 ~~~-~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~-g~~~-~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
..+ +||..+. .+.+++++||+|+.|++.... +.+. .+.+ .......+..+.++|+|||.+++.+-
T Consensus 40 ~l~i~gD~l~~------L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~--~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 40 HVYDVCDCLDT------LAKLPDDSVQLIICDPPYNIMLADWDDHMDY--IGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEECCHHHH------HHTSCTTCEEEEEECCCSBCCGGGGGTCSSH--HHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEECCcHHHH------HHhCccCCcCEEEECCCCCCCCCCccCHHHH--HHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 456 8887542 234667799999999865432 1111 1111 23345677788999999999998654
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.47 E-value=0.47 Score=41.62 Aligned_cols=95 Identities=12% Similarity=0.017 Sum_probs=55.1
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCC--hhhHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITN--ARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~--~~~~~~ 110 (249)
+++|.+||=+|+|+ |.....+++.++ ..+|+++|.++.+. . -|.. .+ |..+ .+..+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~~~~~~~~ 253 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-------------ASRIIGVGTHKDKFPKAIELGATECL--NPKDYDKPIYEV 253 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEECSCGGGHHHHHHTTCSEEE--CGGGCSSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEECCCHHHHHHHHHcCCcEEE--ecccccchHHHH
Confidence 46899999999644 333334555554 13799999887531 0 1221 22 2221 122333
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~k 166 (249)
+.+... +.+|+|+-- .|. ...+..+.++|+++ |++++-
T Consensus 254 i~~~t~-gg~Dvvid~-----~g~------------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 254 ICEKTN-GGVDYAVEC-----AGR------------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHHHTT-SCBSEEEEC-----SCC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHhC-CCCCEEEEC-----CCC------------HHHHHHHHHHHhcCCCEEEEE
Confidence 443333 479999842 221 12466788999999 999863
No 330
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.32 E-value=0.18 Score=43.80 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=57.6
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCce-EeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVI-QVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~-~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||=.|+|+ |.....+++..+ ..+|+++|.++.+. --|.. .+.. .+ +..+.+.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g-------------~~~Vi~~~~~~~~~~~~~~lGa~~~i~~--~~-~~~~~v~ 232 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS-------------AARVIAVDLDDDRLALAREVGADAAVKS--GA-GAADAIR 232 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC-------------CCEEEEEESCHHHHHHHHHTTCSEEEEC--ST-THHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHcCCCEEEcC--CC-cHHHHHH
Confidence 47899999999754 444444555553 36999999887431 01221 2221 12 2334444
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+...+..+|+|+-- .|. ...+..+.++|++||++++-
T Consensus 233 ~~t~g~g~d~v~d~-----~G~------------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 233 ELTGGQGATAVFDF-----VGA------------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp HHHGGGCEEEEEES-----SCC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEC-----CCC------------HHHHHHHHHHHhcCCEEEEE
Confidence 44444579999853 222 12567788999999999873
No 331
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=93.26 E-value=0.079 Score=45.41 Aligned_cols=95 Identities=11% Similarity=0.072 Sum_probs=59.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~i~ 112 (249)
+..+||+-+|+|.++..+.++ ..+++.||.++.. ...+++++++|... .+.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~---------------~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~-----~L~ 151 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS---------------QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVS-----KLN 151 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT---------------TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHH-----HHH
T ss_pred CCCceeEeCCcHHHHHHHcCC---------------CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHH-----HHH
Confidence 567999999999999887762 2589999998732 12457777777543 222
Q ss_pred HhcC-CCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 113 RHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 113 ~~~~-~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
...+ ..+||+|+.|++.... +... +. ...+. ....+.++|.+++
T Consensus 152 ~l~~~~~~fdLVfiDPPYe~k-----~~~~--~v-l~~L~-~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 152 ALLPPPEKRGLIFIDPSYERK-----EEYK--EI-PYAIK-NAYSKFSTGLYCV 196 (283)
T ss_dssp HHCSCTTSCEEEEECCCCCST-----THHH--HH-HHHHH-HHHHHCTTSEEEE
T ss_pred HhcCCCCCccEEEECCCCCCC-----cHHH--HH-HHHHH-HhCccCCCeEEEE
Confidence 2222 2479999999865321 1111 11 11222 2346788999886
No 332
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.24 E-value=0.16 Score=46.87 Aligned_cols=72 Identities=17% Similarity=0.130 Sum_probs=47.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C---CCceEeecCCCChhh-----
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I---EGVIQVQGDITNART----- 107 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~---~~v~~~~gDi~~~~~----- 107 (249)
..+|+||+||.||++..+.+. + --.|.++|+++.+. . ++...+.+||.+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G-------------~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~ 153 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-G-------------GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEG 153 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-T-------------EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTT
T ss_pred cceEEEecCCccHHHHHHHHC-C-------------CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccc
Confidence 479999999999999887643 2 13578999988531 1 455667889876431
Q ss_pred ------HHHHHHhcCCCcccEEEeCCCC
Q 025715 108 ------AEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 108 ------~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
.+.+...+ ..+|+|+..++|
T Consensus 154 ~~~~~~~~~i~~~~--~~~Dvl~gGpPC 179 (482)
T 3me5_A 154 VSDEAAAEHIRQHI--PEHDVLLAGFPC 179 (482)
T ss_dssp SCHHHHHHHHHHHS--CCCSEEEEECCC
T ss_pred cchhhHHhhhhhcC--CCCCEEEecCCC
Confidence 11122222 368999976543
No 333
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.14 E-value=0.17 Score=43.81 Aligned_cols=93 Identities=14% Similarity=0.089 Sum_probs=58.0
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||-.|+|+ |.....+++..+ .+|+++|.++.+. . -+.. .+ |..+.+..+.+.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~~i--~~~~~~~~~~~~ 227 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMG--------------LRVAAVDIDDAKLNLARRLGAEVAV--NARDTDPAAWLQ 227 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTT--------------CEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCHHHHHHHHHcCCCEEE--eCCCcCHHHHHH
Confidence 47899999999876 555556666654 6999999886431 0 1221 22 333333334444
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+. . +.+|+|+-.. |. ...+..+.++|++||++++-
T Consensus 228 ~~-~-g~~d~vid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 228 KE-I-GGAHGVLVTA-----VS------------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HH-H-SSEEEEEESS-----CC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred Hh-C-CCCCEEEEeC-----CC------------HHHHHHHHHHhccCCEEEEe
Confidence 42 2 3799998542 11 12467788999999999863
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.13 E-value=0.54 Score=41.24 Aligned_cols=95 Identities=13% Similarity=0.026 Sum_probs=53.9
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCC--hhhHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITN--ARTAEVV 111 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~--~~~~~~i 111 (249)
+++|.+||=+|+|+ |.....+++.++ ..+|+++|.++.+. . -+...+ -|..+ .+..+.+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v 258 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG-------------ASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVI 258 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHH
Confidence 46899999999643 333333454444 13799999887541 0 122111 12221 1223334
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIA 165 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~ 165 (249)
.+... +.+|+|+-- .|. ...+..+.++|++| |++++
T Consensus 259 ~~~~~-~g~Dvvid~-----~G~------------~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 259 TELTA-GGVDYSLDC-----AGT------------AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp HHHHT-SCBSEEEES-----SCC------------HHHHHHHHHTBCTTTCEEEE
T ss_pred HHHhC-CCccEEEEC-----CCC------------HHHHHHHHHHhhcCCCEEEE
Confidence 33333 479999842 221 12466788999999 99986
No 335
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.01 E-value=0.97 Score=38.05 Aligned_cols=61 Identities=16% Similarity=0.138 Sum_probs=39.2
Q ss_pred CCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 93 EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 93 ~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+++++.|++.+ ++..+....+..++|+|..|+-. ... ....++.+...|+|||.+++--+
T Consensus 158 ~~i~li~G~~~d--TL~~~l~~~~~~~~dlv~ID~D~-------Y~~------t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 158 QRSVLVEGDVRE--TVPRYLAENPQTVIALAYFDLDL-------YEP------TKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp CSEEEEESCHHH--HHHHHHHHCTTCCEEEEEECCCC-------HHH------HHHHHHHHGGGEEEEEEEEESST
T ss_pred CcEEEEEecHHH--HHHHHHHhCCCCceEEEEEcCcc-------cch------HHHHHHHHHHHhCCCcEEEEcCC
Confidence 356777777643 44444333445679999999721 111 23467778899999999987554
No 336
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.93 E-value=0.6 Score=40.92 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=54.1
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCC--hhhHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITN--ARTAEVV 111 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~--~~~~~~i 111 (249)
+++|.+||=.|+|+ |.....+++.++ ..+|+++|.++.+. . -+...+ -|..+ .+..+.+
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG-------------AKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVL 255 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHH
Confidence 46899999999643 333333454443 12799999887431 0 132111 12221 1222333
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~k 166 (249)
.+... +.+|+|+-. .|. ...+..+.++|++| |++++-
T Consensus 256 ~~~~~-~g~D~vid~-----~g~------------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 256 SKMTN-GGVDFSLEC-----VGN------------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHT-SCBSEEEEC-----SCC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhC-CCCCEEEEC-----CCC------------HHHHHHHHHHhhcCCcEEEEE
Confidence 33333 479999853 221 02466788999999 999863
No 337
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.90 E-value=0.14 Score=45.00 Aligned_cols=94 Identities=13% Similarity=0.053 Sum_probs=55.7
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||=.|+|+ |.....+++..+ .+|+++|.++.+. . -|.. .+ |-...+..+.+.
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~v~ 250 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATG--------------AEVIVTSSSREKLDRAFALGADHGI--NRLEEDWVERVY 250 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTT--------------CEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEecCchhHHHHHHcCCCEEE--cCCcccHHHHHH
Confidence 47899999999654 333334455444 6899999876321 0 1221 22 211122334444
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+...+..+|+|+-.. |. + .+..+.++|++||++++.
T Consensus 251 ~~~~g~g~D~vid~~-----g~---~----------~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 251 ALTGDRGADHILEIA-----GG---A----------GLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp HHHTTCCEEEEEEET-----TS---S----------CHHHHHHHEEEEEEEEEE
T ss_pred HHhCCCCceEEEECC-----Ch---H----------HHHHHHHHhhcCCEEEEE
Confidence 444555799998542 21 1 245678899999999974
No 338
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.87 E-value=0.39 Score=41.52 Aligned_cols=95 Identities=19% Similarity=0.176 Sum_probs=57.4
Q ss_pred ccCCCeEEEEcCCC--ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAP--GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gp--G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||=.|+|. |.....+++..+ .+|+++|.++.+. . -+...+ -|..+.+..+.+.
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~ 206 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN--------------FRLIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVM 206 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT--------------CEEEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHH
Confidence 47899999999863 444445565554 6999999887541 0 122111 1333434444555
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+...+..+|+|+... |. . .+..+.++|++||++++-
T Consensus 207 ~~~~~~g~Dvvid~~-----g~---~----------~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 207 ELTNGIGADAAIDSI-----GG---P----------DGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp HHTTTSCEEEEEESS-----CH---H----------HHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCcEEEECC-----CC---h----------hHHHHHHHhcCCCEEEEE
Confidence 555556899998642 21 0 122344799999999874
No 339
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.85 E-value=0.87 Score=37.50 Aligned_cols=116 Identities=8% Similarity=-0.020 Sum_probs=70.3
Q ss_pred cCCCeEEEEcCC-CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~g-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~ 109 (249)
.++++||=.|++ +|++...+++.+.. ...+|+.++.+... ...++.++.+|+++.+..+
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 80 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKR-----------EGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQID 80 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHH-----------cCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHH
Confidence 356899999984 57888887776642 24688888887421 1235778899999987665
Q ss_pred HHHHhcC--CCcccEEEeCCCCCCC-----CCCC-cCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 110 VVIRHFD--GCKADLVVCDGAPDVT-----GLHD-MDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD~~~~~~-----g~~~-~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+.+. -+.+|+++.+...... .... .+... ..+. ....+..+...++++|+++..
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 152 (271)
T 3ek2_A 81 ALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTL 152 (271)
T ss_dssp HHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEE
Confidence 5443321 1479999998754321 1111 22211 1111 133455566677778888764
No 340
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=92.85 E-value=0.46 Score=39.55 Aligned_cols=115 Identities=13% Similarity=0.077 Sum_probs=69.5
Q ss_pred CCCeEEEEcC-CCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------CC-CCceEeecCCCChhhHHHH
Q 025715 41 GVKRVVDLCA-APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PI-EGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 41 ~g~~vLDLG~-gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------~~-~~v~~~~gDi~~~~~~~~i 111 (249)
.++++|=.|+ |+|++...+++.+.. ...+|+.+|.++.. .+ .++.++.+|+++.+..+.+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 74 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQE-----------QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASL 74 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-----------TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHH-----------CCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHH
Confidence 3568888898 588999988887642 24688888887632 11 2467789999998765554
Q ss_pred HHh----cC-CCcccEEEeCCCCCC------CCCCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 112 IRH----FD-GCKADLVVCDGAPDV------TGLHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 112 ~~~----~~-~~~~DlVlsD~~~~~------~g~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+. +. .+.+|+++.+..... ....+.+... ..+. ....+..+...++++|++|..
T Consensus 75 ~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 147 (269)
T 2h7i_A 75 AGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGM 147 (269)
T ss_dssp HHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEE
Confidence 433 22 127999999875322 1111122211 1111 123455566666778888864
No 341
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.80 E-value=0.67 Score=40.60 Aligned_cols=95 Identities=13% Similarity=0.055 Sum_probs=54.0
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCC--hhhHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITN--ARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~--~~~~~~ 110 (249)
+++|.+||=.|+|+ |.....+++.++ ..+|+++|.++.+. . -+.. .+ |..+ .+..+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~ 253 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAG-------------AARIIGVDINKDKFAKAKEVGATECV--NPQDYKKPIQEV 253 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCGGGHHHHHHTTCSEEE--CGGGCSSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHhCCceEe--cccccchhHHHH
Confidence 46899999999643 333333444443 13799999887431 0 1221 12 2221 122233
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~k 166 (249)
+.+. .++.+|+|+-. .|. ...+..+.++|++| |++++-
T Consensus 254 ~~~~-~~~g~D~vid~-----~g~------------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 254 LTEM-SNGGVDFSFEV-----IGR------------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHH-TTSCBSEEEEC-----SCC------------HHHHHHHHHHBCTTTCEEEEC
T ss_pred HHHH-hCCCCcEEEEC-----CCC------------HHHHHHHHHHhhcCCcEEEEe
Confidence 3332 23479999853 221 12466788999999 999863
No 342
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.67 E-value=0.38 Score=41.67 Aligned_cols=92 Identities=20% Similarity=0.087 Sum_probs=53.4
Q ss_pred CCCeEEEEcCCCChHHHH---HHHHhcCCCCCCCCCCCCCCC-eEEEecCCCCC--CCCCceEeecCCCChhhHHHHHHh
Q 025715 41 GVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMA--PIEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~---l~~~~~~~~~~~~~~~~~~~~-~vvavDi~~~~--~~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
+|.+||-.|+ |+.... +++..+ . +|+++|.++.+ .........-|..+.+..+.+.+.
T Consensus 164 ~g~~VlV~Ga--G~vG~~~~q~a~~~G--------------a~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~ 227 (343)
T 2dq4_A 164 SGKSVLITGA--GPIGLMAAMVVRASG--------------AGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRV 227 (343)
T ss_dssp TTSCEEEECC--SHHHHHHHHHHHHTT--------------CCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHH
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcC--------------CCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHh
Confidence 8899999998 555544 444443 4 89999987532 111110011233333333344433
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
. ...+|+|+-. .|. ...+..+.++|+++|++++-
T Consensus 228 ~-~~g~D~vid~-----~g~------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 228 T-GSGVEVLLEF-----SGN------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp H-SSCEEEEEEC-----SCC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred c-CCCCCEEEEC-----CCC------------HHHHHHHHHHHhcCCEEEEE
Confidence 3 4579999853 221 12456788999999998863
No 343
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.57 E-value=0.2 Score=44.18 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=55.7
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-C---CCceEeecCCCChhhHHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-I---EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-~---~~v~~~~gDi~~~~~~~~i~~ 113 (249)
+++|.+||=.|+|+ |.++..+++..+ ..+|+++|.++.+. + -|...+ -|..+.+..+.+.+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAG-------------ATTVILSTRQATKRRLAEEVGATAT-VDPSAGDVVEAIAG 245 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCHHHHHHHHHHTCSEE-ECTTSSCHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHcCCCEE-ECCCCcCHHHHHHh
Confidence 47899999999744 333334455544 23899999886431 0 122111 13333333333433
Q ss_pred h--cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 114 H--FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~--~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
. +.++.+|+|+-. .|. ...+..+.++|++||++++-
T Consensus 246 ~~~~~~gg~Dvvid~-----~G~------------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 246 PVGLVPGGVDVVIEC-----AGV------------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTSSSTTCEEEEEEC-----SCC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred hhhccCCCCCEEEEC-----CCC------------HHHHHHHHHHhccCCEEEEE
Confidence 1 223479999852 221 12467788999999999873
No 344
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.51 E-value=2.7 Score=35.63 Aligned_cols=74 Identities=23% Similarity=0.277 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHHh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
.+++||=.| |+|+...++++.+-. .+..|++++.++.. .+.++.++.+|+++.+....+.+.
T Consensus 19 ~~~~vlVTG-asG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 19 SHMRILITG-GAGCLGSNLIEHWLP-----------QGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp TCCEEEEET-TTSHHHHHHHHHHGG-----------GTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhh
Confidence 357888887 678888888877642 23689999986432 235788899999998765554432
Q ss_pred cCCCcccEEEeCCCC
Q 025715 115 FDGCKADLVVCDGAP 129 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~ 129 (249)
. .+|+|+...+.
T Consensus 87 ~---~~D~vih~A~~ 98 (330)
T 2pzm_A 87 F---KPTHVVHSAAA 98 (330)
T ss_dssp H---CCSEEEECCCC
T ss_pred c---CCCEEEECCcc
Confidence 2 58999998754
No 345
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.44 E-value=0.69 Score=40.46 Aligned_cols=95 Identities=14% Similarity=0.063 Sum_probs=54.3
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCC--hhhHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITN--ARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~--~~~~~~ 110 (249)
+++|.+||=.|+|+ |.....+++.++ ..+|+++|.++.+. . -+.. .+ |..+ .+..+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~ 252 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAG-------------ASRIIGVDINKDKFARAKEFGATECI--NPQDFSKPIQEV 252 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEECSCGGGHHHHHHHTCSEEE--CGGGCSSCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHcCCceEe--ccccccccHHHH
Confidence 46899999999643 333333455554 13799999887541 1 1221 12 2221 122333
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCC-CEEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~g-G~lv~k 166 (249)
+.+... +.+|+|+-. .|. ...+..+.++|+++ |++++-
T Consensus 253 v~~~~~-~g~D~vid~-----~g~------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 253 LIEMTD-GGVDYSFEC-----IGN------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHHTT-SCBSEEEEC-----SCC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHhC-CCCCEEEEC-----CCc------------HHHHHHHHHhhccCCcEEEEE
Confidence 433323 479999853 221 12466788999999 999863
No 346
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=92.25 E-value=1.5 Score=35.63 Aligned_cols=114 Identities=16% Similarity=0.105 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHh----cC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRH----FD 116 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~----~~ 116 (249)
.++++|=.| |+|+....+++.+.. ...+|+.++.++......+.++.+|+++.+..+.+.+. +.
T Consensus 6 ~~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 6 EARRVLVYG-GRGALGSRCVQAFRA-----------RNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp CCCEEEEET-TTSHHHHHHHHHHHT-----------TTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 456788777 567788888777642 34689999988754333456678999987765544332 32
Q ss_pred CCcccEEEeCCCCCCCCC--CCcCHH---HHHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 117 GCKADLVVCDGAPDVTGL--HDMDEF---VQSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 117 ~~~~DlVlsD~~~~~~g~--~~~~~~---~~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+|+++.+......+. ...+.. ...+. ....+..+...++++|+++..
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~i 132 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLA 132 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEE
Confidence 147999999875332111 111111 11111 123344555666677888763
No 347
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.23 E-value=0.1 Score=43.78 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=29.6
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~ 89 (249)
++|..|||.+||+|..+.++.+. + .+++|+|+++.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~-g--------------r~~ig~e~~~~ 245 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL-G--------------RNFIGCDMNAE 245 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT-T--------------CEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C--------------CeEEEEeCCHH
Confidence 68899999999999998877653 3 58999999873
No 348
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.22 E-value=1.3 Score=37.50 Aligned_cols=116 Identities=13% Similarity=0.067 Sum_probs=69.7
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.|++. .++...+++.+.. ...+|+.+|.++.. ...++.++++|+++.+..+.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA-----------QGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 467888888764 5777777776542 34689999988532 12346788999999876655
Q ss_pred HHHhcCC--CcccEEEeCCCCCC-----CCCCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEEE
Q 025715 111 VIRHFDG--CKADLVVCDGAPDV-----TGLHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 111 i~~~~~~--~~~DlVlsD~~~~~-----~g~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+.+.+.. +.+|+++.+..... ....+.+... ..+. ....+..+...++++|++|...
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 5443211 47999999875432 1111222111 1111 1334555666777789888643
No 349
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.15 E-value=0.33 Score=42.02 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=60.1
Q ss_pred ccCCCeEEEEcCCCChHHHH-HHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCc-eEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQV-LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGV-IQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~-l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v-~~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||=+|+|+++-... +++..+ ..+|+++|.++.+. --+. ..+ |..+.+..+++.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-------------g~~Vi~~~~~~~r~~~~~~~Ga~~~i--~~~~~~~~~~v~ 225 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-------------GAKVIAVDINQDKLNLAKKIGADVTI--NSGDVNPVDEIK 225 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-------------CCEEEEEESCHHHHHHHHHTTCSEEE--EC-CCCHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-------------CCEEEEEECcHHHhhhhhhcCCeEEE--eCCCCCHHHHhh
Confidence 37899999999988654433 344443 47999999987431 1121 122 333444445566
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+...+..+|.++-+.. . ...+..+.++|+++|++++.
T Consensus 226 ~~t~g~g~d~~~~~~~-----~------------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 226 KITGGLGVQSAIVCAV-----A------------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp HHTTSSCEEEEEECCS-----C------------HHHHHHHHHTEEEEEEEEEC
T ss_pred hhcCCCCceEEEEecc-----C------------cchhheeheeecCCceEEEE
Confidence 5555567888876531 1 13567788999999999864
No 350
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=92.13 E-value=1.4 Score=36.62 Aligned_cols=78 Identities=12% Similarity=0.034 Sum_probs=53.6
Q ss_pred CCCeEEEEcCC-CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----C----CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----P----IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~g-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----~----~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.|++ +|+....+++.+.. .+.+|+.++.++.. . ..++.++.+|+++.+....
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFN-----------QGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHT-----------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHH
Confidence 35688888886 48888888887752 34689999887631 0 1346788999999876555
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+.+. -+.+|+++.+...
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~ 94 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAF 94 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCcc
Confidence 443221 1479999998753
No 351
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.84 E-value=0.23 Score=43.35 Aligned_cols=92 Identities=13% Similarity=-0.008 Sum_probs=56.1
Q ss_pred cCC------CeEEEEcCCCChHHHHH-HHHh-cCCCCCCCCCCCCCCCe-EEEecCCCC---C-CC---CCceEeecCCC
Q 025715 40 EGV------KRVVDLCAAPGSWSQVL-SRKL-YLPAKLSPDSREGDLPL-IVAIDLQPM---A-PI---EGVIQVQGDIT 103 (249)
Q Consensus 40 ~~g------~~vLDLG~gpG~~s~~l-~~~~-~~~~~~~~~~~~~~~~~-vvavDi~~~---~-~~---~~v~~~~gDi~ 103 (249)
++| .+||=.|+ |+....+ .+.. .. ...+ |+++|.++. + .+ -|...+ |..
T Consensus 165 ~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~-----------~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~ 229 (357)
T 2b5w_A 165 SRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDD-----------KGYENLYCLGRRDRPDPTIDIIEELDATYV--DSR 229 (357)
T ss_dssp TTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCT-----------TCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETT
T ss_pred CCCcccCCCCEEEEECC--CHHHHHHHHHHHHHH-----------cCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCC
Confidence 578 99999997 6666655 5444 31 1245 999999875 3 11 244333 444
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+.+..+ +.+. . +.+|+|+-- .|. . ..+..+.++|++||++++-
T Consensus 230 ~~~~~~-i~~~-~-gg~Dvvid~-----~g~----~--------~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 230 QTPVED-VPDV-Y-EQMDFIYEA-----TGF----P--------KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp TSCGGG-HHHH-S-CCEEEEEEC-----SCC----H--------HHHHHHHHHEEEEEEEEEC
T ss_pred ccCHHH-HHHh-C-CCCCEEEEC-----CCC----h--------HHHHHHHHHHhcCCEEEEE
Confidence 333323 3333 3 379999842 221 0 2466788999999999873
No 352
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.59 E-value=0.37 Score=41.78 Aligned_cols=94 Identities=16% Similarity=0.054 Sum_probs=56.5
Q ss_pred ccCCCeEEEEcC--CCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~--gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||-.|+ |-|.....+++..+ .+|+++|.++.+. . -+...+ .|..+.+..+.+.
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G--------------~~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~ 228 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFG--------------ARVIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVR 228 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTT--------------CEEEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHH
Confidence 468899999998 33444444555443 6899999876321 1 122211 2444444444454
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+......+|+|+..... + .+..+.++|+++|++++
T Consensus 229 ~~~~~~~~d~vi~~~g~--------~----------~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 229 RLTGGKGADKVVDHTGA--------L----------YFEGVIKATANGGRIAI 263 (343)
T ss_dssp HHTTTTCEEEEEESSCS--------S----------SHHHHHHHEEEEEEEEE
T ss_pred HHhCCCCceEEEECCCH--------H----------HHHHHHHhhccCCEEEE
Confidence 44444579999975421 0 24567789999999886
No 353
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=91.54 E-value=1.3 Score=37.63 Aligned_cols=75 Identities=11% Similarity=0.020 Sum_probs=51.2
Q ss_pred cCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHH
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~ 109 (249)
.++++||=.| |+|....++++.+-. .+.+|++++.++... ..++.++.+|+++.+...
T Consensus 12 ~~~~~vlVTG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 79 (335)
T 1rpn_A 12 SMTRSALVTG-ITGQDGAYLAKLLLE-----------KGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ 79 (335)
T ss_dssp ---CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHH
T ss_pred ccCCeEEEEC-CCChHHHHHHHHHHH-----------CCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHH
Confidence 4678999887 679999888776641 236899999876431 246788899999987655
Q ss_pred HHHHhcCCCcccEEEeCCCC
Q 025715 110 VVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~ 129 (249)
.+.+.. .+|.|+...+.
T Consensus 80 ~~~~~~---~~d~Vih~A~~ 96 (335)
T 1rpn_A 80 RAVIKA---QPQEVYNLAAQ 96 (335)
T ss_dssp HHHHHH---CCSEEEECCSC
T ss_pred HHHHHc---CCCEEEECccc
Confidence 544322 58999987653
No 354
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=91.37 E-value=2 Score=33.53 Aligned_cols=65 Identities=17% Similarity=0.241 Sum_probs=48.1
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCcccE
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADL 122 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~Dl 122 (249)
+++|=.| |+|+....+++++. .+.+|++++.++. .+.+|+++.+..+.+.+.+ +.+|.
T Consensus 4 M~vlVtG-asg~iG~~~~~~l~------------~g~~V~~~~r~~~-------~~~~D~~~~~~~~~~~~~~--~~~d~ 61 (202)
T 3d7l_A 4 MKILLIG-ASGTLGSAVKERLE------------KKAEVITAGRHSG-------DVTVDITNIDSIKKMYEQV--GKVDA 61 (202)
T ss_dssp CEEEEET-TTSHHHHHHHHHHT------------TTSEEEEEESSSS-------SEECCTTCHHHHHHHHHHH--CCEEE
T ss_pred cEEEEEc-CCcHHHHHHHHHHH------------CCCeEEEEecCcc-------ceeeecCCHHHHHHHHHHh--CCCCE
Confidence 4788777 46888888888774 1368999987753 4678999988776666554 46999
Q ss_pred EEeCCCC
Q 025715 123 VVCDGAP 129 (249)
Q Consensus 123 VlsD~~~ 129 (249)
|+.....
T Consensus 62 vi~~ag~ 68 (202)
T 3d7l_A 62 IVSATGS 68 (202)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998753
No 355
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.29 E-value=0.67 Score=41.16 Aligned_cols=99 Identities=15% Similarity=0.079 Sum_probs=53.7
Q ss_pred ccCCCeEEEEcCCCChHHHH---HHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCChhhHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITNARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~~~~~~~ 110 (249)
+++|.+||=.|+ |+.... +++..+ ..+|+++|.++.+. . -|.. .+ |..+.+..+.
T Consensus 211 ~~~g~~VlV~Ga--G~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~ 273 (404)
T 3ip1_A 211 IRPGDNVVILGG--GPIGLAAVAILKHAG-------------ASKVILSEPSEVRRNLAKELGADHVI--DPTKENFVEA 273 (404)
T ss_dssp CCTTCEEEEECC--SHHHHHHHHHHHHTT-------------CSEEEEECSCHHHHHHHHHHTCSEEE--CTTTSCHHHH
T ss_pred CCCCCEEEEECC--CHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHcCCCEEE--cCCCCCHHHH
Confidence 478999999987 455554 444443 23899999887431 0 1221 22 3333334445
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+.+...+..+|+|+-- .|. ... ....++....+.+++||++++-
T Consensus 274 i~~~t~g~g~D~vid~-----~g~----~~~---~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 274 VLDYTNGLGAKLFLEA-----TGV----PQL---VWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp HHHHTTTCCCSEEEEC-----SSC----HHH---HHHHHHHHHHHCSCCCCEEEEC
T ss_pred HHHHhCCCCCCEEEEC-----CCC----cHH---HHHHHHHHHHhccCCCcEEEEe
Confidence 5554455579999842 222 100 0111122222445999999973
No 356
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.26 E-value=1.2 Score=37.54 Aligned_cols=116 Identities=14% Similarity=0.069 Sum_probs=68.8
Q ss_pred CCCeEEEEcCCCC-hHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG-~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.|++.| |+...+++.+.. ...+|+.++.++.. ...++.++.+|+++.+..+.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 98 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE-----------AGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDA 98 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH-----------TTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHH
Confidence 4678898898754 567766665531 24688888877421 12357788999999876655
Q ss_pred HHHhcC--CCcccEEEeCCCCCC-----CCCCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEEE
Q 025715 111 VIRHFD--GCKADLVVCDGAPDV-----TGLHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~~~-----~g~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+.+.+. -+.+|+++.+..... ......+... ..+. ....+..+...++++|++|...
T Consensus 99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 544321 147999999875432 1111122211 1111 1334555666777889988643
No 357
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=91.24 E-value=2.1 Score=33.97 Aligned_cols=71 Identities=13% Similarity=0.069 Sum_probs=50.8
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--CCCCceEeecCCCC-hhhHHHHHHhcCCCc
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITN-ARTAEVVIRHFDGCK 119 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--~~~~v~~~~gDi~~-~~~~~~i~~~~~~~~ 119 (249)
++||=.| |+|+....+++.+-. .+.+|++++.++.. ...+++++.+|+++ .+.+ .+.+. .
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~~--~ 63 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLST-----------TDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEM---AKQLH--G 63 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTT-----------SSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHH---HTTTT--T
T ss_pred CeEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEECCccchhhcCCceEEEecccCCHHHH---HHHHc--C
Confidence 3566566 679999999887752 24689999998743 23688999999999 6543 33333 5
Q ss_pred ccEEEeCCCCC
Q 025715 120 ADLVVCDGAPD 130 (249)
Q Consensus 120 ~DlVlsD~~~~ 130 (249)
+|+|+......
T Consensus 64 ~d~vi~~ag~~ 74 (219)
T 3dqp_A 64 MDAIINVSGSG 74 (219)
T ss_dssp CSEEEECCCCT
T ss_pred CCEEEECCcCC
Confidence 99999987543
No 358
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=91.13 E-value=2 Score=36.13 Aligned_cols=77 Identities=18% Similarity=0.142 Sum_probs=50.2
Q ss_pred cccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCC
Q 025715 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDG 117 (249)
Q Consensus 38 ~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~ 117 (249)
...+-++||=.| |+|....++++.+-. .+..|++++.++.....++.++.+|+++.+....+.+.
T Consensus 8 ~~~~~~~vlVTG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~--- 72 (321)
T 2pk3_A 8 HHHGSMRALITG-VAGFVGKYLANHLTE-----------QNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISD--- 72 (321)
T ss_dssp -----CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHH---
T ss_pred cccCcceEEEEC-CCChHHHHHHHHHHH-----------CCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHh---
Confidence 334556777655 679999988876641 23689999987643111678889999998765554432
Q ss_pred CcccEEEeCCCC
Q 025715 118 CKADLVVCDGAP 129 (249)
Q Consensus 118 ~~~DlVlsD~~~ 129 (249)
..+|.|+...+.
T Consensus 73 ~~~d~vih~A~~ 84 (321)
T 2pk3_A 73 IKPDYIFHLAAK 84 (321)
T ss_dssp HCCSEEEECCSC
T ss_pred cCCCEEEEcCcc
Confidence 458999988654
No 359
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.96 E-value=0.46 Score=41.89 Aligned_cols=94 Identities=19% Similarity=0.154 Sum_probs=55.2
Q ss_pred ccCCCeEEEEcCCCChHHHHH---HHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCC---Chhh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVL---SRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDIT---NART 107 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l---~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~---~~~~ 107 (249)
+++|.+||-.|+ |+....+ ++..+ ..+|+++|.++.+. . -|.. .+ |.. +.+.
T Consensus 193 ~~~g~~VlV~Ga--G~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~ 255 (380)
T 1vj0_A 193 SFAGKTVVIQGA--GPLGLFGVVIARSLG-------------AENVIVIAGSPNRLKLAEEIGADLTL--NRRETSVEER 255 (380)
T ss_dssp CCBTCEEEEECC--SHHHHHHHHHHHHTT-------------BSEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHH
T ss_pred CCCCCEEEEECc--CHHHHHHHHHHHHcC-------------CceEEEEcCCHHHHHHHHHcCCcEEE--eccccCcchH
Confidence 468999999994 5555544 43332 14899999876321 0 1221 22 222 2233
Q ss_pred HHHHHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+.+...+..+|+|+-.. |.. ..+..+.++|++||++++-
T Consensus 256 ~~~v~~~~~g~g~Dvvid~~-----g~~------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 256 RKAIMDITHGRGADFILEAT-----GDS------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHHHHHTTTSCEEEEEECS-----SCT------------THHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHhCCCCCcEEEECC-----CCH------------HHHHHHHHHHhcCCEEEEE
Confidence 34444433444799998532 210 1356778999999999863
No 360
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.85 E-value=1.8 Score=34.93 Aligned_cols=113 Identities=16% Similarity=0.151 Sum_probs=65.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHH----hcCC
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIR----HFDG 117 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~----~~~~ 117 (249)
++++|=.| |+|+....+++.+.. ...+|+.++.++......+.++.+|+++.+..+.+.+ .+..
T Consensus 3 ~k~vlITG-as~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 3 SGKVIVYG-GKGALGSAILEFFKK-----------NGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHHH-----------TTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 45666666 567788887776642 2368999998875433345667899998776544433 2322
Q ss_pred CcccEEEeCCCCCCCCC--CCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 118 CKADLVVCDGAPDVTGL--HDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 118 ~~~DlVlsD~~~~~~g~--~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+.+|+|+.+......+. ...+... ..+. ....+..+...++++|+++..
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 128 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 128 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEE
Confidence 47999999875322111 1111111 1111 122345555666677888763
No 361
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.83 E-value=2.2 Score=36.39 Aligned_cols=70 Identities=19% Similarity=0.212 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCcc
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~ 120 (249)
++++||=.| |+|....++++.+-. .+..|++++.++.. .++.++.+|+++.+....+. . .+
T Consensus 18 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~--~~~~~~~~Dl~d~~~~~~~~---~--~~ 78 (347)
T 4id9_A 18 GSHMILVTG-SAGRVGRAVVAALRT-----------QGRTVRGFDLRPSG--TGGEEVVGSLEDGQALSDAI---M--GV 78 (347)
T ss_dssp ---CEEEET-TTSHHHHHHHHHHHH-----------TTCCEEEEESSCCS--SCCSEEESCTTCHHHHHHHH---T--TC
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHh-----------CCCEEEEEeCCCCC--CCccEEecCcCCHHHHHHHH---h--CC
Confidence 467888887 679999988876641 23689999988755 67888999999987654443 3 69
Q ss_pred cEEEeCCCC
Q 025715 121 DLVVCDGAP 129 (249)
Q Consensus 121 DlVlsD~~~ 129 (249)
|.|+...+.
T Consensus 79 d~vih~A~~ 87 (347)
T 4id9_A 79 SAVLHLGAF 87 (347)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999987654
No 362
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=90.78 E-value=2.3 Score=35.44 Aligned_cols=78 Identities=13% Similarity=0.049 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.|++. |+....+++.+.. .+.+|+.++.++.. ...++.++.+|+++.+..+.
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHR-----------EGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 457888888864 8888888776642 24689988887621 01346788999999876555
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+.+. -+.+|+++.+...
T Consensus 89 ~~~~~~~~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSIAY 109 (285)
T ss_dssp HHHHHHHHTSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 443221 1479999998753
No 363
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.72 E-value=0.52 Score=40.78 Aligned_cols=93 Identities=12% Similarity=0.070 Sum_probs=54.9
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~~ 113 (249)
+++|++||-.|+|+ |.....+++..+ .+|+++|.++.+. . -+...+ .|..+.+..+.+.+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~ 226 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMG--------------LNVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKE 226 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTT--------------CEEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHH
Confidence 47899999999854 333333444443 6999999876321 0 122211 24443333334433
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
.. +.+|+|+... |. . ..+..+.++|+++|++++
T Consensus 227 ~~--~~~d~vid~~-----g~----~--------~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 227 KV--GGVHAAVVTA-----VS----K--------PAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp HH--SSEEEEEESS-----CC----H--------HHHHHHHHHEEEEEEEEE
T ss_pred Hh--CCCCEEEECC-----CC----H--------HHHHHHHHHhhcCCEEEE
Confidence 33 4799998642 21 0 245677889999999986
No 364
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=90.64 E-value=0.28 Score=44.11 Aligned_cols=37 Identities=16% Similarity=0.069 Sum_probs=31.1
Q ss_pred cCCCeEEEEcCCCChHHHHHHH-HhcCCCCCCCCCCCCCCCeEEEecCCC
Q 025715 40 EGVKRVVDLCAAPGSWSQVLSR-KLYLPAKLSPDSREGDLPLIVAIDLQP 88 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~~l~~-~~~~~~~~~~~~~~~~~~~vvavDi~~ 88 (249)
+++..|+|+||+.|.++..++. ..+ +.++|++++.+|
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~------------~~~~V~afEP~p 262 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKG------------KFERVWMIEPDR 262 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTS------------CCSEEEEECCCH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcC------------CCCEEEEEcCCH
Confidence 6889999999999999998874 443 237999999987
No 365
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=90.52 E-value=1.4 Score=36.38 Aligned_cols=78 Identities=13% Similarity=0.003 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----C----CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----P----IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----~----~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.|++. |+....+++.+.. ...+|+.++.++.. . ..+..++.+|+++.+..+.
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHR-----------EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----------CCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHH
Confidence 356788888763 8888888876642 24689999887611 0 1234678899999876655
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+... -+.+|+++.+...
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIGF 97 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 544321 1479999998753
No 366
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.45 E-value=0.46 Score=41.23 Aligned_cols=97 Identities=16% Similarity=0.046 Sum_probs=55.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCC-hhhHHHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITN-ARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~-~~~~~~i~~ 113 (249)
+++|++||-.|+ +|+....+.+.... ...+|+++|.++.+. . -+... ..|..+ .+..+.+.+
T Consensus 167 ~~~g~~vlV~Ga-~ggiG~~~~~~a~~-----------~Ga~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 167 LMAGHWVAISGA-AGGLGSLAVQYAKA-----------MGYRVLGIDGGEGKEELFRSIGGEV-FIDFTKEKDIVGAVLK 233 (347)
T ss_dssp CCTTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECSTTHHHHHHHTTCCE-EEETTTCSCHHHHHHH
T ss_pred CCCCCEEEEECC-CchHHHHHHHHHHH-----------CCCcEEEEcCCHHHHHHHHHcCCce-EEecCccHhHHHHHHH
Confidence 468999999997 34444443332210 126899999876431 0 12221 125442 222333333
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.... .+|+|+.... . ...+..+.+.|++||++++.
T Consensus 234 ~~~~-~~D~vi~~~g-----~------------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 234 ATDG-GAHGVINVSV-----S------------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHTS-CEEEEEECSS-----C------------HHHHHHHTTSEEEEEEEEEC
T ss_pred HhCC-CCCEEEECCC-----c------------HHHHHHHHHHHhcCCEEEEE
Confidence 3333 7999997532 1 02466788999999999863
No 367
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.42 E-value=0.46 Score=41.21 Aligned_cols=92 Identities=14% Similarity=0.065 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCCChHHHHH---HHHhcCCCCCCCCCCCCCCC-eEEEecCCCCCC--C--CCceEeecCCCChhhHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVL---SRKLYLPAKLSPDSREGDLP-LIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l---~~~~~~~~~~~~~~~~~~~~-~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~ 112 (249)
+|.+||=+|+ |+....+ ++..+ . +|+++|.++.+. . -+...+ -|..+.+..+.+.
T Consensus 167 ~g~~VlV~Ga--G~vG~~~~q~a~~~G--------------a~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~ 229 (348)
T 2d8a_A 167 SGKSVLITGA--GPLGLLGIAVAKASG--------------AYPVIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVM 229 (348)
T ss_dssp TTCCEEEECC--SHHHHHHHHHHHHTT--------------CCSEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHH
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcC--------------CCEEEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHH
Confidence 8899999998 5555544 43433 4 899999886321 1 122111 1333333344444
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+...+..+|+|+... |. ...+..+.++|+++|++++-
T Consensus 230 ~~~~g~g~D~vid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 230 DITDGNGVDVFLEFS-----GA------------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp HHTTTSCEEEEEECS-----CC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHcCCCCCCEEEECC-----CC------------HHHHHHHHHHHhcCCEEEEE
Confidence 433445799998632 21 02456778999999998863
No 368
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=90.29 E-value=5.9 Score=31.57 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=50.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcC-CCcc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD-GCKA 120 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~-~~~~ 120 (249)
++++|=.| |+|+....+++.+.. ...+|++++.++. ...+.++.+|+++.+....+.+.+. .+.+
T Consensus 2 ~k~vlVtG-asggiG~~la~~l~~-----------~G~~V~~~~r~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTG-GASGLGRAAALALKA-----------RGYRVVVLDLRRE--GEDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH-----------HTCEEEEEESSCC--SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeC-CCChHHHHHHHHHHH-----------CCCEEEEEccCcc--ccceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 35677777 468888887776531 2368999998875 4567788999999876655544321 1368
Q ss_pred cEEEeCCCC
Q 025715 121 DLVVCDGAP 129 (249)
Q Consensus 121 DlVlsD~~~ 129 (249)
|.|+.+...
T Consensus 68 d~li~~ag~ 76 (242)
T 1uay_A 68 FAVVSAAGV 76 (242)
T ss_dssp EEEEECCCC
T ss_pred eEEEEcccc
Confidence 999988643
No 369
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=90.27 E-value=2.7 Score=35.56 Aligned_cols=74 Identities=9% Similarity=-0.048 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------~~~v~~~~gDi~~~~~~~ 109 (249)
.+++||=.| |+|+...++++++-. .+..|++++.++... -.++.++.+|+++.+...
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 71 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLA-----------HGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALA 71 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHH
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHH-----------CCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHH
Confidence 346777666 678888888877642 246899999876432 136788999999987666
Q ss_pred HHHHhcCCCcccEEEeCCCC
Q 025715 110 VVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~ 129 (249)
.+.+. ..+|+|+...+.
T Consensus 72 ~~~~~---~~~d~vih~A~~ 88 (341)
T 3enk_A 72 RIFDA---HPITAAIHFAAL 88 (341)
T ss_dssp HHHHH---SCCCEEEECCCC
T ss_pred HHHhc---cCCcEEEECccc
Confidence 55432 469999987753
No 370
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=90.19 E-value=4 Score=34.66 Aligned_cols=74 Identities=20% Similarity=0.171 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHHh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
.+++||=.| |+|....++++.+-. .+..|++++.++.. .++++.++.+|+++.+....+.+.
T Consensus 20 ~~~~vlVTG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~ 87 (333)
T 2q1w_A 20 HMKKVFITG-ICGQIGSHIAELLLE-----------RGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD 87 (333)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeC-CccHHHHHHHHHHHH-----------CCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc
Confidence 357888777 678899888776641 23689999887532 125788899999998765554432
Q ss_pred cCCCcccEEEeCCCC
Q 025715 115 FDGCKADLVVCDGAP 129 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~ 129 (249)
..+|+|+...+.
T Consensus 88 ---~~~D~vih~A~~ 99 (333)
T 2q1w_A 88 ---LQPDAVVHTAAS 99 (333)
T ss_dssp ---HCCSEEEECCCC
T ss_pred ---cCCcEEEECcee
Confidence 359999988754
No 371
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.12 E-value=0.92 Score=39.27 Aligned_cols=86 Identities=13% Similarity=0.066 Sum_probs=51.7
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~~ 113 (249)
+++|.+||=.|+|+ |.....+++..+ .+|+++|.++.+. . -|...+. .+.+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~------- 229 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG--------------AEVSVFARNEHKKQDALSMGVKHFY---TDPK------- 229 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT--------------CEEEEECSSSTTHHHHHHTTCSEEE---SSGG-------
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC--------------CeEEEEeCCHHHHHHHHhcCCCeec---CCHH-------
Confidence 47899999998754 333334555544 6899999887541 0 1222221 2221
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+. ..+|+|+--. |.. ..+..+.++|++||++++-
T Consensus 230 ~~~-~~~D~vid~~-----g~~------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 230 QCK-EELDFIISTI-----PTH------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp GCC-SCEEEEEECC-----CSC------------CCHHHHHTTEEEEEEEEEC
T ss_pred HHh-cCCCEEEECC-----CcH------------HHHHHHHHHHhcCCEEEEE
Confidence 123 2799998532 211 1255678999999999974
No 372
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=90.03 E-value=4.6 Score=32.17 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=62.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCccc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~D 121 (249)
++++|=-|+ +|+....+++++.. ...+|+.++.++. .|+++.+..+.+.+.+ +++|
T Consensus 6 ~k~vlVTGa-s~gIG~~~a~~l~~-----------~G~~V~~~~r~~~----------~D~~~~~~v~~~~~~~--g~id 61 (223)
T 3uce_A 6 KTVYVVLGG-TSGIGAELAKQLES-----------EHTIVHVASRQTG----------LDISDEKSVYHYFETI--GAFD 61 (223)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHCS-----------TTEEEEEESGGGT----------CCTTCHHHHHHHHHHH--CSEE
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEecCCcc----------cCCCCHHHHHHHHHHh--CCCC
Confidence 456666664 57788888887752 3457888886653 6999988777776665 4799
Q ss_pred EEEeCCCCC-C-CCCCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 122 LVVCDGAPD-V-TGLHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 122 lVlsD~~~~-~-~g~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.++.+.... . ....+.+... ..+. ....++.+...++++|+++..
T Consensus 62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~ 115 (223)
T 3uce_A 62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLT 115 (223)
T ss_dssp EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEe
Confidence 999987532 1 1112222211 1111 133455666777888988864
No 373
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.70 E-value=0.56 Score=41.24 Aligned_cols=90 Identities=18% Similarity=0.090 Sum_probs=52.0
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~~ 113 (249)
+++|.+||-+|+|+ |.....+++..+ .+|+++|.++.+. . -|...+ -|..+.+.. +
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~G--------------a~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~----~ 252 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMG--------------AHVVAFTTSEAKREAAKALGADEV-VNSRNADEM----A 252 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSGGGHHHHHHHTCSEE-EETTCHHHH----H
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHHcCCcEE-eccccHHHH----H
Confidence 47899999999754 333444555544 6799999887431 1 122111 133332211 2
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
.+. ..+|+|+--. |.. ..+..+.++|+++|++++
T Consensus 253 ~~~-~g~Dvvid~~-----g~~------------~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 253 AHL-KSFDFILNTV-----AAP------------HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp TTT-TCEEEEEECC-----SSC------------CCHHHHHTTEEEEEEEEE
T ss_pred Hhh-cCCCEEEECC-----CCH------------HHHHHHHHHhccCCEEEE
Confidence 222 4799998532 211 124567889999999886
No 374
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=89.69 E-value=6.7 Score=32.45 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhcC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
.|+++|=-|++. |+...+++++.. ...+|+.+|+++... -.++..++.|+++.+..+.+.+.+
T Consensus 10 ~GK~alVTGas~-GIG~aia~~la~-----------~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~- 76 (242)
T 4b79_A 10 AGQQVLVTGGSS-GIGAAIAMQFAE-----------LGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEAL- 76 (242)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH-----------TTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHC-
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH-----------CCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhc-
Confidence 477888778664 567777666642 357999999987432 246778899999998888888776
Q ss_pred CCcccEEEeCCCC
Q 025715 117 GCKADLVVCDGAP 129 (249)
Q Consensus 117 ~~~~DlVlsD~~~ 129 (249)
++.|+++.|...
T Consensus 77 -g~iDiLVNNAGi 88 (242)
T 4b79_A 77 -PRLDVLVNNAGI 88 (242)
T ss_dssp -SCCSEEEECCCC
T ss_pred -CCCCEEEECCCC
Confidence 479999999753
No 375
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=89.46 E-value=0.22 Score=43.28 Aligned_cols=90 Identities=16% Similarity=0.128 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHh--cCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCC-hhhHHHH
Q 025715 41 GVKRVVDLCAAP-GSWSQVLSRKL--YLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITN-ARTAEVV 111 (249)
Q Consensus 41 ~g~~vLDLG~gp-G~~s~~l~~~~--~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~-~~~~~~i 111 (249)
+|.+||-+|+|+ |.....+++.. + .+|+++|.++.+. . -+.. .+ |..+ .+....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~ 233 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN--------------ITIVGISRSKKHRDFALELGADYVS--EMKDAESLINKL 233 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT--------------CEEEEECSCHHHHHHHHHHTCSEEE--CHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC--------------CEEEEEeCCHHHHHHHHHhCCCEEe--ccccchHHHHHh
Confidence 899999999853 33344455555 4 6899999876331 1 1221 11 2111 1112222
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
. .+..+|+|+-- .|. . ..+..+.++|++||++++-
T Consensus 234 ~---~g~g~D~vid~-----~g~----~--------~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 234 T---DGLGASIAIDL-----VGT----E--------ETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp H---TTCCEEEEEES-----SCC----H--------HHHHHHHHHEEEEEEEEEC
T ss_pred h---cCCCccEEEEC-----CCC----h--------HHHHHHHHHhhcCCEEEEe
Confidence 1 23479999853 221 1 2466788999999999863
No 376
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=89.46 E-value=1.7 Score=35.84 Aligned_cols=78 Identities=13% Similarity=0.052 Sum_probs=52.1
Q ss_pred CCCeEEEEcCC-CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CCCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~g-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.|++ +|+....+++.+.. ...+|+.++.++.. ...++.++.+|+++.+..+.
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 75 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKE-----------AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDA 75 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHH-----------HTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHH
Confidence 35688888986 48888888776631 23688988887621 01346788999999876554
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+... -+.+|+|+.+...
T Consensus 76 ~~~~~~~~~g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 76 LFAGVKEAFGGLDYLVHAIAF 96 (261)
T ss_dssp HHHHHHHHHSSEEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 433221 1369999998753
No 377
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.45 E-value=6.6 Score=32.10 Aligned_cols=116 Identities=13% Similarity=0.056 Sum_probs=67.6
Q ss_pred CCCeEEEEcCCCC-hHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CC--CCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI--EGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG-~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~--~~v~~~~gDi~~~~~~ 108 (249)
.++++|=.|++.| |+...+++.+.. ...+|+.++.+... .. .++.++.+|+++.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 74 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE-----------AGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEI 74 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----------CCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHH
Confidence 4578888887643 466666665531 24688888877521 11 2578899999998766
Q ss_pred HHHHHhcCC--CcccEEEeCCCCCC-----CCCCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEEE
Q 025715 109 EVVIRHFDG--CKADLVVCDGAPDV-----TGLHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 109 ~~i~~~~~~--~~~DlVlsD~~~~~-----~g~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+.+.+.+.. +.+|.++.+..... ....+.+... ..+. ....+..+...++++|+++...
T Consensus 75 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 75 ETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 554433211 46999999875432 1111122211 1111 1234556667778889988643
No 378
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.36 E-value=1.6 Score=35.68 Aligned_cols=115 Identities=11% Similarity=-0.003 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------C----CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P----IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~----~~~v~~~~gDi~~~~~~~~ 110 (249)
++++||=.| |+|++...+++.+... ...+|+.++.++.. . -.++.++.+|+++.+..+.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~----------~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~ 71 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRL----------FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRA 71 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHH----------SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHh----------cCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence 355677555 6788888887766410 13688888887521 0 1357788999999876555
Q ss_pred HHHhcC--CCcccEEEeCCCCCCCCCCCcC-HH---HHHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 111 VIRHFD--GCKADLVVCDGAPDVTGLHDMD-EF---VQSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~~~~g~~~~~-~~---~~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+.+.+. .+.+|+|+.+......+..... .. ...+. ....+..+...++++|++|..
T Consensus 72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 443221 1369999998753322211111 11 11111 133455566667777887763
No 379
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.30 E-value=0.84 Score=39.74 Aligned_cols=96 Identities=11% Similarity=0.042 Sum_probs=56.8
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHHHh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
+++|.+||-.|+ +|+....+.+.... ...+|+++|.++.+. . .+... ..|..+.+..+.+.+.
T Consensus 168 ~~~g~~vlV~Ga-sggiG~~~~~~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 168 VKAGESVLVHGA-SGGVGLAACQIARA-----------YGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKY 234 (351)
T ss_dssp CCTTCEEEEETC-SSHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHH
T ss_pred CCCcCEEEEECC-CChHHHHHHHHHHH-----------CCCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHH
Confidence 468899999996 34455444333221 136899999876321 0 12211 1244444444555554
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
.....+|+|+... |. ..+..+.++|++||++++
T Consensus 235 ~~~~~~D~vi~~~-----G~-------------~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 235 VGEKGIDIIIEML-----AN-------------VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp HCTTCEEEEEESC-----HH-------------HHHHHHHHHEEEEEEEEE
T ss_pred cCCCCcEEEEECC-----Ch-------------HHHHHHHHhccCCCEEEE
Confidence 5555799998643 10 134567899999999986
No 380
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=89.23 E-value=1.6 Score=37.37 Aligned_cols=71 Identities=21% Similarity=0.206 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---------C------CCceEeecCCCCh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------I------EGVIQVQGDITNA 105 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---------~------~~v~~~~gDi~~~ 105 (249)
.+++||=.| |+|....++++.+-. .+..|++++..+... . .+++++.+|+++.
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 91 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLK-----------LNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL 91 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH
Confidence 457888777 679999888876631 236899999876431 0 6789999999997
Q ss_pred hhHHHHHHhcCCCcccEEEeCCC
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGA 128 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~ 128 (249)
+....+ +. .+|+|+...+
T Consensus 92 ~~~~~~---~~--~~d~Vih~A~ 109 (351)
T 3ruf_A 92 TTCEQV---MK--GVDHVLHQAA 109 (351)
T ss_dssp HHHHHH---TT--TCSEEEECCC
T ss_pred HHHHHH---hc--CCCEEEECCc
Confidence 654433 33 6999998765
No 381
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.13 E-value=0.6 Score=40.11 Aligned_cols=96 Identities=17% Similarity=0.024 Sum_probs=55.8
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCC-hhhHHHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITN-ARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~-~~~~~~i~~ 113 (249)
+++|.+||-.|++ |+....+++.... ...+|+++|.++.+. . -+.. ...|..+ .+..+.+.+
T Consensus 143 ~~~g~~vlV~Ga~-ggiG~~~~~~~~~-----------~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 143 VKGGETVLVSAAA-GAVGSVVGQIAKL-----------KGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKK 209 (333)
T ss_dssp CCSSCEEEEESTT-BHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHH
T ss_pred CCCCCEEEEecCC-CcHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHH
Confidence 4688999999973 4455544443221 136899999875321 0 1221 1235554 333334443
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
... +.+|+|+.... . ..+..+.++|++||++++-
T Consensus 210 ~~~-~~~d~vi~~~g-----~-------------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 210 ASP-DGYDCYFDNVG-----G-------------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HCT-TCEEEEEESSC-----H-------------HHHHHHHTTEEEEEEEEEC
T ss_pred HhC-CCCeEEEECCC-----h-------------HHHHHHHHHHhcCCEEEEE
Confidence 333 57999997532 1 1356778999999999863
No 382
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=89.08 E-value=4.1 Score=33.76 Aligned_cols=77 Identities=12% Similarity=0.075 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcC--CC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GC 118 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~--~~ 118 (249)
.+++||=.|+ +|++...+++.+.. .+.+|+.+|.++......+..+.+|+++.+....+.+.+. -+
T Consensus 13 ~~k~vlVTGa-s~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 13 TDKVAIVTGG-SSGIGLAVVDALVR-----------YGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHH-----------TTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4677887774 56777777776642 3468999998876544466778999999876555443221 14
Q ss_pred cccEEEeCCCC
Q 025715 119 KADLVVCDGAP 129 (249)
Q Consensus 119 ~~DlVlsD~~~ 129 (249)
.+|+++.+...
T Consensus 81 ~iD~lv~nAg~ 91 (269)
T 3vtz_A 81 RIDILVNNAGI 91 (269)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999754
No 383
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=88.96 E-value=6.2 Score=33.74 Aligned_cols=72 Identities=17% Similarity=0.080 Sum_probs=46.5
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------C--------CCCceEeecCCCChhh
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------P--------IEGVIQVQGDITNART 107 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------~--------~~~v~~~~gDi~~~~~ 107 (249)
++||=.| |+|+...++++.+-. .+.+|++++.++.. . -.++.++.+|+++.+.
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (372)
T 1db3_A 2 KVALITG-VTGQDGSYLAEFLLE-----------KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSN 69 (372)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECC---------------------CCEEECCCCSSCHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHH-----------CCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHH
Confidence 4566556 578888888776631 23589999876431 1 1367788999999876
Q ss_pred HHHHHHhcCCCcccEEEeCCCC
Q 025715 108 AEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 108 ~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
...+.+.. .+|.|+...+.
T Consensus 70 ~~~~~~~~---~~d~vih~A~~ 88 (372)
T 1db3_A 70 LTRILREV---QPDEVYNLGAM 88 (372)
T ss_dssp HHHHHHHH---CCSEEEECCCC
T ss_pred HHHHHHhc---CCCEEEECCcc
Confidence 55544322 58999988754
No 384
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=88.95 E-value=1 Score=38.98 Aligned_cols=93 Identities=18% Similarity=0.195 Sum_probs=55.2
Q ss_pred ccCCCeEEEEcCC--CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCChhhHHHH
Q 025715 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITNARTAEVV 111 (249)
Q Consensus 39 ~~~g~~vLDLG~g--pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~~~~~~~i 111 (249)
+++|.+||=.|++ -|.....+++..+ .+|++++.++.+. . -+.. .+ |.. .+..+.+
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~~ga~~v~--~~~-~~~~~~v 219 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMG--------------AKVIAVVNRTAATEFVKSVGADIVL--PLE-EGWAKAV 219 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT--------------CEEEEEESSGGGHHHHHHHTCSEEE--ESS-TTHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHhcCCcEEe--cCc-hhHHHHH
Confidence 4789999998862 2333334455444 6899999876431 0 1221 22 222 2334445
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+...+..+|+|+... |.. .+..+.++|++||++++-
T Consensus 220 ~~~~~~~g~Dvvid~~-----g~~-------------~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 220 REATGGAGVDMVVDPI-----GGP-------------AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HHHTTTSCEEEEEESC-----C---------------CHHHHHHTEEEEEEEEEC
T ss_pred HHHhCCCCceEEEECC-----chh-------------HHHHHHHhhcCCCEEEEE
Confidence 5544545799998643 211 245678899999999873
No 385
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=88.86 E-value=4.2 Score=34.30 Aligned_cols=73 Identities=16% Similarity=0.004 Sum_probs=50.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~i 111 (249)
+++||=.| |+|+...++++.+-. .+.+|++++.++... ..++.++.+|+++.+....+
T Consensus 3 ~~~vlVtG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 70 (345)
T 2z1m_A 3 GKRALITG-IRGQDGAYLAKLLLE-----------KGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRT 70 (345)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHH-----------CCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHH
Confidence 46777777 578888888776641 236899999876431 13678889999998765554
Q ss_pred HHhcCCCcccEEEeCCCC
Q 025715 112 IRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~ 129 (249)
.+.. .+|.|+...+.
T Consensus 71 ~~~~---~~d~vih~A~~ 85 (345)
T 2z1m_A 71 IEKV---QPDEVYNLAAQ 85 (345)
T ss_dssp HHHH---CCSEEEECCCC
T ss_pred HHhc---CCCEEEECCCC
Confidence 4322 58999988754
No 386
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=88.82 E-value=0.86 Score=39.19 Aligned_cols=93 Identities=19% Similarity=0.030 Sum_probs=56.4
Q ss_pred ccCCCeEEEEcCCCChHHHH---HHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--CC---CCceEeecCCCChhhHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PI---EGVIQVQGDITNARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--~~---~~v~~~~gDi~~~~~~~~ 110 (249)
+++|++||-.|++ |+.... +++..+ .+|+++|.++.+ .. -+... .-|..+.+..+.
T Consensus 147 ~~~g~~vlI~Ga~-g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~ 210 (336)
T 4b7c_A 147 PKNGETVVISGAA-GAVGSVAGQIARLKG--------------CRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAG 210 (336)
T ss_dssp CCTTCEEEESSTT-SHHHHHHHHHHHHTT--------------CEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHH
T ss_pred CCCCCEEEEECCC-CHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHH
Confidence 4789999998873 334443 444433 699999987632 01 12211 124444444445
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+.+.. .+.+|+|+... |. ..+..+.++|++||++++-
T Consensus 211 ~~~~~-~~~~d~vi~~~-----g~-------------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 211 LKREC-PKGIDVFFDNV-----GG-------------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHHC-TTCEEEEEESS-----CH-------------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHhc-CCCceEEEECC-----Cc-------------chHHHHHHHHhhCCEEEEE
Confidence 55444 45799998643 21 1456788999999999863
No 387
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=88.78 E-value=8.7 Score=33.33 Aligned_cols=148 Identities=16% Similarity=0.090 Sum_probs=82.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----CCCCceEeecCCCChhhHHHHHHhcC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----~~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
+|..||=+|+|||.+..+|.+..... +...+.+.+|..+.. ..++++.++ +..+.+....+...+.
T Consensus 75 ~g~~VVYaGsAPG~HI~fL~~lF~~l---------~~~lkwvLiDp~~f~~~Le~~~ni~li~-~ffde~~i~~l~~~~~ 144 (348)
T 1vpt_A 75 DGATVVYIGSAPGTHIRYLRDHFYNL---------GVIIKWMLIDGRHHDPILNGLRDVTLVT-RFVDEEYLRSIKKQLH 144 (348)
T ss_dssp TTCEEEEESCSSCHHHHHHHHHHHHT---------TCCCEEEEEESSCCCGGGTTCTTEEEEE-CCCCHHHHHHHHHHHT
T ss_pred CCCeEEEeCcCCcchHHHHHHHhhhc---------CCceEEEEECCCchhhhhcCCCcEEeeh-hhcCHHHHHHHHHHhc
Confidence 46799999999999999999866410 023688999998863 356776554 5666665555555555
Q ss_pred CCcccEE-EeCCCCC-CCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc-CCCeeEEecCC
Q 025715 117 GCKADLV-VCDGAPD-VTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL-FFPVVTFAKPK 193 (249)
Q Consensus 117 ~~~~DlV-lsD~~~~-~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~-~f~~v~~~kP~ 193 (249)
+ -+++ +||.... ..+. ......+.- .++-...+..|+|--.++ | |+.+-...-. +. +.-.-...-|.
T Consensus 145 ~--~~vLfISDIRS~~~~~E--p~~~dll~D-y~lQn~w~~iLkP~aSmL-K-FRlPyp~~~~---~~~yi~dG~~~Lqv 214 (348)
T 1vpt_A 145 P--SKIILISDVASAAGGNE--PSTADLLSN-YALQNVMISILNPVASSL-K-WRCPFPDQWI---KDFYIPHGNKMLQP 214 (348)
T ss_dssp T--SCEEEEECCCC--------CCHHHHHHH-HHHHHHHHHHHCCSEEEE-E-ECCCCGGGCC---CCEEEECCEEECCT
T ss_pred C--CCEEEEEecccCCCCCC--ccHHHHHHH-HHHHHHHHHHhhhHHHhc-c-ccCCCCCCCC---CceEeeCCCEEecc
Confidence 3 3665 7886321 1111 122222111 123344567889886654 3 3332211100 11 11122334466
Q ss_pred CCCCCCceEEEEEee
Q 025715 194 SSRNSSIEAFAVCEN 208 (249)
Q Consensus 194 ~sr~~s~E~y~v~~g 208 (249)
-.++.|+|..++...
T Consensus 215 wap~tStE~RLvv~~ 229 (348)
T 1vpt_A 215 FAPSYSAEMRLLSIY 229 (348)
T ss_dssp TCCTTCCCEEEEEEC
T ss_pred cCCCCcceEEEEEec
Confidence 667788898888754
No 388
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=88.38 E-value=3.5 Score=35.01 Aligned_cols=76 Identities=16% Similarity=0.139 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
.+++||=.| |+|....++++.+-.. +....|+++|...... .++++++.+|+++.+....
T Consensus 23 ~~~~vlVtG-atG~iG~~l~~~L~~~---------g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 92 (346)
T 4egb_A 23 NAMNILVTG-GAGFIGSNFVHYMLQS---------YETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEH 92 (346)
T ss_dssp -CEEEEEET-TTSHHHHHHHHHHHHH---------CTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHH
T ss_pred CCCeEEEEC-CccHHHHHHHHHHHhh---------CCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHH
Confidence 457888777 6788888887765310 0125888998765221 1578899999999876655
Q ss_pred HHHhcCCCcccEEEeCCCC
Q 025715 111 VIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~ 129 (249)
+.+. ..+|+|+...+.
T Consensus 93 ~~~~---~~~d~Vih~A~~ 108 (346)
T 4egb_A 93 VIKE---RDVQVIVNFAAE 108 (346)
T ss_dssp HHHH---HTCCEEEECCCC
T ss_pred HHhh---cCCCEEEECCcc
Confidence 5432 359999987654
No 389
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.15 E-value=0.57 Score=40.21 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=56.6
Q ss_pred ccCCCeEEEEcC-CC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~-gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~ 112 (249)
+++|++||=.|+ |+ |.....+++..+ .+|++++.++.+. . -+... .-|..+.+..+.+.
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALG--------------AKLIGTVSSPEKAAHAKALGAWE-TIDYSHEDVAKRVL 202 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT--------------CEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHHcCCCE-EEeCCCccHHHHHH
Confidence 478999998883 22 333334455544 6899999876321 0 12211 12333444445555
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+...+..+|+|+... |. ..+..+.++|++||++++-
T Consensus 203 ~~~~~~g~Dvvid~~-----g~-------------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 203 ELTDGKKCPVVYDGV-----GQ-------------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HHTTTCCEEEEEESS-----CG-------------GGHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCceEEEECC-----Ch-------------HHHHHHHHHhcCCCEEEEE
Confidence 555556899998643 21 1345678999999999974
No 390
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.13 E-value=0.63 Score=40.07 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=56.3
Q ss_pred ccCCCeEEEEcCCCChHHHH---HHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i 111 (249)
+++|.+||=.|+ .|+.... +++..+ .+|+++|.++.+. . -+... .-|..+.+..+.+
T Consensus 146 ~~~g~~vlV~Ga-~g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~ 209 (334)
T 3qwb_A 146 VKKGDYVLLFAA-AGGVGLILNQLLKMKG--------------AHTIAVASTDEKLKIAKEYGAEY-LINASKEDILRQV 209 (334)
T ss_dssp CCTTCEEEESST-TBHHHHHHHHHHHHTT--------------CEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHH
T ss_pred CCCCCEEEEECC-CCHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHHcCCcE-EEeCCCchHHHHH
Confidence 478999999984 3444444 344433 6899999876321 0 12211 1233334444555
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+...+..+|+|+... |. ..+..+.++|++||++++-
T Consensus 210 ~~~~~~~g~D~vid~~-----g~-------------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 210 LKFTNGKGVDASFDSV-----GK-------------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp HHHTTTSCEEEEEECC-----GG-------------GGHHHHHHHEEEEEEEEEC
T ss_pred HHHhCCCCceEEEECC-----Ch-------------HHHHHHHHHhccCCEEEEE
Confidence 5555556799998643 21 1355678899999999873
No 391
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=87.89 E-value=7.8 Score=33.15 Aligned_cols=75 Identities=12% Similarity=-0.005 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCC------------CC-----CCCceEeecCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------------AP-----IEGVIQVQGDIT 103 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~------------~~-----~~~v~~~~gDi~ 103 (249)
.+++||=.| |+|....++++.+-.. +.+.+|+++|.++. .. -.++.++.+|++
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~~---------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 78 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQEN---------HPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADIN 78 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHH---------CTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTT
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHhh---------CCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCC
Confidence 457888777 7899999888776410 01468999998653 11 135688999999
Q ss_pred ChhhHHHHHHhcCCCcccEEEeCCCC
Q 025715 104 NARTAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 104 ~~~~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
+.+....+ ....+|+|+...+.
T Consensus 79 d~~~~~~~----~~~~~D~vih~A~~ 100 (362)
T 3sxp_A 79 NPLDLRRL----EKLHFDYLFHQAAV 100 (362)
T ss_dssp CHHHHHHH----TTSCCSEEEECCCC
T ss_pred CHHHHHHh----hccCCCEEEECCcc
Confidence 98765443 23579999988763
No 392
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.52 E-value=6 Score=32.65 Aligned_cols=114 Identities=16% Similarity=0.103 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------------------CCCCceEe
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------------------~~~~v~~~ 98 (249)
.|+++|=-|++ |++...+++.+.. ...+|+.+|.+... .-.++.++
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAE-----------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTA 76 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEE
Confidence 35677777754 6777777776542 34689999887210 01256788
Q ss_pred ecCCCChhhHHHHHHhcC--CCcccEEEeCCCCCCCCCC-CcCHH-HHHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAPDVTGLH-DMDEF-VQSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~--~~~~DlVlsD~~~~~~g~~-~~~~~-~~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+|+++.+....+.+.+. -+.+|+++.+......+.. +.+.+ ...+. ....+..+...++++|+++..
T Consensus 77 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 77 EVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 999999876555443221 1379999999754322211 11211 11221 133455566677788988763
No 393
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=87.40 E-value=6.1 Score=32.41 Aligned_cols=70 Identities=24% Similarity=0.312 Sum_probs=50.9
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-CCCceEeecCCCChhhHHHHHHhcCCCccc
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-~~~v~~~~gDi~~~~~~~~i~~~~~~~~~D 121 (249)
++||=.| |+|+...++++.+.. ...+|+++|.++... -.++.++.+|+++.+....+. . .+|
T Consensus 4 k~vlVTG-asg~IG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~--~~D 66 (267)
T 3rft_A 4 KRLLVTG-AAGQLGRVMRERLAP-----------MAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMV---A--GCD 66 (267)
T ss_dssp EEEEEES-TTSHHHHHHHHHTGG-----------GEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHH---T--TCS
T ss_pred CEEEEEC-CCCHHHHHHHHHHHh-----------cCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHH---c--CCC
Confidence 4566555 578899998887752 235899999987553 357888999999987655543 2 689
Q ss_pred EEEeCCCC
Q 025715 122 LVVCDGAP 129 (249)
Q Consensus 122 lVlsD~~~ 129 (249)
+|+.+...
T Consensus 67 ~vi~~Ag~ 74 (267)
T 3rft_A 67 GIVHLGGI 74 (267)
T ss_dssp EEEECCSC
T ss_pred EEEECCCC
Confidence 99998765
No 394
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.36 E-value=0.54 Score=40.33 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=56.5
Q ss_pred ccCCCeEEEEcCCCChHHHHH---HHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVL---SRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l---~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i 111 (249)
+++|.+||-.|+ .|+....+ ++..+ .+|+++|.++.+. . .+... ..|..+.+..+.+
T Consensus 138 ~~~g~~vlV~Ga-~ggiG~~~~~~a~~~G--------------~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~ 201 (327)
T 1qor_A 138 IKPDEQFLFHAA-AGGVGLIACQWAKALG--------------AKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERL 201 (327)
T ss_dssp CCTTCEEEESST-TBHHHHHHHHHHHHHT--------------CEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHH
T ss_pred CCCCCEEEEECC-CCHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHH
Confidence 468899999984 34444444 33333 6899999875321 0 12211 1244444444555
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+......+|+|+..... ..+..+.++|++||++++.
T Consensus 202 ~~~~~~~~~D~vi~~~g~------------------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 202 KEITGGKKVRVVYDSVGR------------------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HHHTTTCCEEEEEECSCG------------------GGHHHHHHTEEEEEEEEEC
T ss_pred HHHhCCCCceEEEECCch------------------HHHHHHHHHhcCCCEEEEE
Confidence 554444579999975421 1355678899999999863
No 395
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=87.23 E-value=8.4 Score=31.59 Aligned_cols=114 Identities=15% Similarity=0.052 Sum_probs=67.6
Q ss_pred CCCeEEEEcCCCC-hHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CC--CCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI--EGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG-~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~--~~v~~~~gDi~~~~~~ 108 (249)
.|+++|=-|++.+ |+...+++.+.. ...+|+.+|+++.. .. .++.+++.|+++.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~-----------~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 73 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ-----------LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEV 73 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence 4678888887653 677777766542 34789999987632 11 3577889999998765
Q ss_pred HHHH----HhcCCCcccEEEeCCCCCCC----CC-CCcC--HHH-HHHH----HHHHHHHHHHhccCCCEEEEEE
Q 025715 109 EVVI----RHFDGCKADLVVCDGAPDVT----GL-HDMD--EFV-QSQL----ILAGLTVVTHVLKEGGKFIAKI 167 (249)
Q Consensus 109 ~~i~----~~~~~~~~DlVlsD~~~~~~----g~-~~~~--~~~-~~~l----~~~~l~~a~~~Lk~gG~lv~k~ 167 (249)
+.+. +.+ ++.|.++.+...... +. .+.. .+. ...+ .......+...++.+|++|...
T Consensus 74 ~~~~~~~~~~~--G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 74 INGFEQIGKDV--GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp HHHHHHHHHHH--CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HHHHHHHHHHh--CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 5443 333 479999988643211 11 1111 111 1111 1223445566788899988643
No 396
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.99 E-value=1 Score=38.67 Aligned_cols=95 Identities=19% Similarity=0.070 Sum_probs=55.9
Q ss_pred ccCCCeEEEEcC--CCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~--gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||=.|+ |-|.....++...+ .+|+++|.++.+. . -+... ..|..+.+..+.+.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--------------~~Vi~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~i~ 207 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLG--------------ATVIGTVSTEEKAETARKLGCHH-TINYSTQDFAEVVR 207 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTT--------------CEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHHcCCCE-EEECCCHHHHHHHH
Confidence 468899999985 23333333444433 6899999886321 1 12211 12444444444555
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+......+|+|+.... . . .+..+.++|++||++++-
T Consensus 208 ~~~~~~~~d~vi~~~g-----~---~----------~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 208 EITGGKGVDVVYDSIG-----K---D----------TLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HHHTTCCEEEEEECSC-----T---T----------THHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCeEEEECCc-----H---H----------HHHHHHHhhccCCEEEEE
Confidence 4444457999996532 1 1 245678899999998863
No 397
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=86.95 E-value=3.4 Score=35.32 Aligned_cols=73 Identities=23% Similarity=0.155 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---------CCCceEeecCCCChhhHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---------~~~v~~~~gDi~~~~~~~~i 111 (249)
.+++||=.| |+|....++++.+-. .+.+|++++.++... ..++.++.+|+++.+....+
T Consensus 8 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 75 (357)
T 1rkx_A 8 QGKRVFVTG-HTGFKGGWLSLWLQT-----------MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLES 75 (357)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHh-----------CCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHH
Confidence 357888777 688999888776641 236899999876431 23688899999998765554
Q ss_pred HHhcCCCcccEEEeCCC
Q 025715 112 IRHFDGCKADLVVCDGA 128 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~ 128 (249)
.+.. .+|+|+...+
T Consensus 76 ~~~~---~~d~vih~A~ 89 (357)
T 1rkx_A 76 IREF---QPEIVFHMAA 89 (357)
T ss_dssp HHHH---CCSEEEECCS
T ss_pred HHhc---CCCEEEECCC
Confidence 4322 5899998765
No 398
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=86.77 E-value=12 Score=31.97 Aligned_cols=151 Identities=15% Similarity=0.084 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----CCCCceEeecCCCChhhHHHHHHhcC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----~~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
.|..|+=+|||||.....++++.+.. +...+.+-+|..+.. ..++|..++. ..+...+..+.+.+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~---------f~~ikWvLiDPap~~~~l~~~~NV~li~~-fvde~dl~~l~~~~~ 129 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNL---------GVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVDEEYLRSIKKQLH 129 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHT---------TCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCCHHHHHHHHHHHT
T ss_pred CCcEEEEecccCccHHHHHHHhchhh---------CCCeEEEEEcCCcchhhhcCCCcEEEEec-cCCHHHHHHHHHhcc
Confidence 36799999999999999999876410 023588999998764 4577876665 446554444444333
Q ss_pred CCcccEE-EeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEecCCCHHHHHHHHhc-CCCeeEEecCCC
Q 025715 117 GCKADLV-VCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKL-FFPVVTFAKPKS 194 (249)
Q Consensus 117 ~~~~DlV-lsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~~~~~~~~l~~~l~~-~f~~v~~~kP~~ 194 (249)
..+++ +||....-.+.. ......+.-. ++-...+..|+|--.++ | |+.+-...-. +. +.-.-...-|.-
T Consensus 130 --~~~iLLISDIRS~r~~~e-p~t~~ll~Dy-~lQ~~w~~~LkP~aS~L-K-FR~P~p~~~~---~~~y~~dG~~~Lq~w 200 (307)
T 3mag_A 130 --PSKIILISDVRSKRGGNE-PSTADLLSNY-ALQNVMISILNPVASSL-K-WRCPFPDQWI---KDFYIPHGNKMLQPF 200 (307)
T ss_dssp --TSCEEEEECCCC-------CCHHHHHHHH-HHHHHHHHHHCCSEEEE-E-ECCCCGGGCC---CCEEEECCEEECCTT
T ss_pred --CCCEEEEEEecCCCCCCC-ccHHHHHHHH-HHHHHHHHHhhhHHHhc-c-ccCCCCcCCC---cceEecCCCEEeccc
Confidence 45555 788643322211 1222222211 23344557899986654 3 3332211100 00 111122334555
Q ss_pred CCCCCceEEEEEeecc
Q 025715 195 SRNSSIEAFAVCENYF 210 (249)
Q Consensus 195 sr~~s~E~y~v~~g~~ 210 (249)
....|+|..++..+-.
T Consensus 201 ~p~~StE~RL~v~~~~ 216 (307)
T 3mag_A 201 APSYSAEMRLLSIYTG 216 (307)
T ss_dssp CCTTCCCEEEEEECCT
T ss_pred CCCCcceEEEEEecCC
Confidence 5677889877775533
No 399
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.72 E-value=10 Score=31.66 Aligned_cols=114 Identities=13% Similarity=0.093 Sum_probs=67.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-----------CCCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-----------~~~~v~~~~gDi~~~~~~~ 109 (249)
.|+++|=.|+ .|++...+++++.. ...+|+.++.+... .-.++.++.+|+++.+..+
T Consensus 46 ~gk~vlVTGa-s~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 113 (291)
T 3ijr_A 46 KGKNVLITGG-DSGIGRAVSIAFAK-----------EGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCK 113 (291)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 3567887785 56777777776642 24688888887631 0135778899999987655
Q ss_pred HHHHhcC--CCcccEEEeCCCCCCC--CCCCcCHH---HHHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 110 VVIRHFD--GCKADLVVCDGAPDVT--GLHDMDEF---VQSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD~~~~~~--g~~~~~~~---~~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+... -+.+|+++.+...... ...+.+.. ...+. ....++.+...++++|++|..
T Consensus 114 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 114 DIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 4433221 1479999998643211 11111211 11111 133455666777889988763
No 400
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=86.48 E-value=9.8 Score=31.61 Aligned_cols=76 Identities=11% Similarity=-0.018 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcC--CC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GC 118 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~--~~ 118 (249)
.|+++|=-|+ .+|+...+++++.. ...+|+..|.+.........++++|+++.+..+.+.+... -+
T Consensus 10 ~GK~alVTGa-s~GIG~aia~~la~-----------~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 10 RGKRALITAG-TKGAGAATVSLFLE-----------LGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp TTCEEEESCC-SSHHHHHHHHHHHH-----------TTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEecc-CcHHHHHHHHHHHH-----------cCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5677776675 45677777776642 3578999999876655555678999999876555443221 15
Q ss_pred cccEEEeCCC
Q 025715 119 KADLVVCDGA 128 (249)
Q Consensus 119 ~~DlVlsD~~ 128 (249)
++|+++.+..
T Consensus 78 ~iDilVnnAG 87 (261)
T 4h15_A 78 GVDVIVHMLG 87 (261)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999864
No 401
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=86.48 E-value=6.8 Score=31.78 Aligned_cols=66 Identities=21% Similarity=0.185 Sum_probs=45.6
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCcccEE
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlV 123 (249)
+||=.| |+|+...++++.+. ...+|++++.++... ++ +.+|+++.+....+.+.. .+|.|
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~------------~g~~V~~~~r~~~~~-~~---~~~Dl~~~~~~~~~~~~~---~~d~v 61 (273)
T 2ggs_A 2 RTLITG-ASGQLGIELSRLLS------------ERHEVIKVYNSSEIQ-GG---YKLDLTDFPRLEDFIIKK---RPDVI 61 (273)
T ss_dssp CEEEET-TTSHHHHHHHHHHT------------TTSCEEEEESSSCCT-TC---EECCTTSHHHHHHHHHHH---CCSEE
T ss_pred EEEEEC-CCChhHHHHHHHHh------------cCCeEEEecCCCcCC-CC---ceeccCCHHHHHHHHHhc---CCCEE
Confidence 455555 57999999988875 236899998876332 33 679999987655544322 58999
Q ss_pred EeCCCC
Q 025715 124 VCDGAP 129 (249)
Q Consensus 124 lsD~~~ 129 (249)
+...+.
T Consensus 62 i~~a~~ 67 (273)
T 2ggs_A 62 INAAAM 67 (273)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 987653
No 402
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.44 E-value=0.65 Score=40.61 Aligned_cols=89 Identities=10% Similarity=0.050 Sum_probs=53.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCC---CCC--C--CCceEeecCCCChhhHHHHHHh
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP---MAP--I--EGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~---~~~--~--~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
|.+||=.|+ |+....+.+.... ...+|+++|.++ .+. . -+...+ | .+ +..+.+.+
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~- 242 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRT-----------YGLEVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKD- 242 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHH-----------HTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHH-
T ss_pred CCEEEEECC--CHHHHHHHHHHHh-----------CCCEEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHH-
Confidence 899999997 6666654443210 125999999886 331 1 133333 4 33 33333433
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHH-HHHHHhccCCCEEEEE
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGL-TVVTHVLKEGGKFIAK 166 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l-~~a~~~Lk~gG~lv~k 166 (249)
.. +.+|+|+... |.. ..+ ..+.++|+++|++++-
T Consensus 243 ~~-~~~d~vid~~-----g~~------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 243 SV-GKFDVIIDAT-----GAD------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp HH-CCEEEEEECC-----CCC------------THHHHHHGGGEEEEEEEEEC
T ss_pred hC-CCCCEEEECC-----CCh------------HHHHHHHHHHHhcCCEEEEE
Confidence 22 5799998643 211 134 6778999999999863
No 403
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=86.31 E-value=13 Score=30.56 Aligned_cols=75 Identities=12% Similarity=0.114 Sum_probs=50.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcC--CCc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GCK 119 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~--~~~ 119 (249)
++++|=.|+ +|+....+++.+.. ...+|+.++.++.. -.++.++.+|+++.+..+.+.+.+. -+.
T Consensus 8 ~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 8 DKVVIVTGA-SMGIGRAIAERFVD-----------EGSKVIDLSIHDPG-EAKYDHIECDVTNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHH-----------TTCEEEEEESSCCC-SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEecCccc-CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 567777774 57777777776642 24689999987654 2457788999999876554433211 136
Q ss_pred ccEEEeCCCC
Q 025715 120 ADLVVCDGAP 129 (249)
Q Consensus 120 ~DlVlsD~~~ 129 (249)
+|+++.+...
T Consensus 75 iD~lv~~Ag~ 84 (264)
T 2dtx_A 75 ISVLVNNAGI 84 (264)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998754
No 404
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.26 E-value=0.81 Score=39.61 Aligned_cols=94 Identities=16% Similarity=0.199 Sum_probs=55.0
Q ss_pred ccCCCeEEEEcCCCChHHHH---HHHHh-cCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQV---LSRKL-YLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEV 110 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~---l~~~~-~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~ 110 (249)
+++|.+||-.|+| |+.... +++.. + .+|+++|.++.+. . -+... ..|..+.+..+.
T Consensus 168 ~~~g~~vlV~Gag-g~iG~~~~~~a~~~~G--------------a~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~ 231 (347)
T 1jvb_A 168 LDPTKTLLVVGAG-GGLGTMAVQIAKAVSG--------------ATIIGVDVREEAVEAAKRAGADY-VINASMQDPLAE 231 (347)
T ss_dssp CCTTCEEEEETTT-SHHHHHHHHHHHHHTC--------------CEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHH
T ss_pred CCCCCEEEEECCC-ccHHHHHHHHHHHcCC--------------CeEEEEcCCHHHHHHHHHhCCCE-EecCCCccHHHH
Confidence 4689999999986 334333 44444 4 6899999876321 1 12211 123333333333
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+.+....+.+|+|+.... . ...+..+.++|+++|++++
T Consensus 232 ~~~~~~~~~~d~vi~~~g-----~------------~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 232 IRRITESKGVDAVIDLNN-----S------------EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp HHHHTTTSCEEEEEESCC-----C------------HHHHTTGGGGEEEEEEEEE
T ss_pred HHHHhcCCCceEEEECCC-----C------------HHHHHHHHHHHhcCCEEEE
Confidence 433332147999986532 1 0245677899999999987
No 405
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.12 E-value=6.2 Score=31.51 Aligned_cols=76 Identities=14% Similarity=0.052 Sum_probs=50.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCC--CeEEEecCCCCCC-------CCCceEeecCCCChhhHHHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL--PLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~--~~vvavDi~~~~~-------~~~v~~~~gDi~~~~~~~~i~ 112 (249)
+++||=.| |+|+....+++.+.. .. .+|++++.++... -.++.++.+|+++.+....+.
T Consensus 3 ~k~vlItG-asggiG~~la~~l~~-----------~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 70 (250)
T 1yo6_A 3 PGSVVVTG-ANRGIGLGLVQQLVK-----------DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFV 70 (250)
T ss_dssp CSEEEESS-CSSHHHHHHHHHHHT-----------CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEec-CCchHHHHHHHHHHh-----------cCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHH
Confidence 35677666 568888888887652 23 6899998875321 135778899999987655544
Q ss_pred Hhc----CCCcccEEEeCCCC
Q 025715 113 RHF----DGCKADLVVCDGAP 129 (249)
Q Consensus 113 ~~~----~~~~~DlVlsD~~~ 129 (249)
+.+ ....+|+|+.+...
T Consensus 71 ~~~~~~~g~~~id~li~~Ag~ 91 (250)
T 1yo6_A 71 SKVGEIVGSDGLSLLINNAGV 91 (250)
T ss_dssp HHHHHHHGGGCCCEEEECCCC
T ss_pred HHHHHhcCCCCCcEEEECCcc
Confidence 332 21269999998753
No 406
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=86.01 E-value=12 Score=30.25 Aligned_cols=111 Identities=16% Similarity=0.159 Sum_probs=65.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcC--CCc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GCK 119 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~--~~~ 119 (249)
+++||=.|++ |+....+++.+.. .+.+|+.+|.++.... . ..+..|+++.+..+.+.+.+. .+.
T Consensus 22 ~k~vlITGas-~gIG~~la~~l~~-----------~G~~V~~~~r~~~~~~-~-~~~~~d~~d~~~v~~~~~~~~~~~g~ 87 (251)
T 3orf_A 22 SKNILVLGGS-GALGAEVVKFFKS-----------KSWNTISIDFRENPNA-D-HSFTIKDSGEEEIKSVIEKINSKSIK 87 (251)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCCTTS-S-EEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCccccc-c-cceEEEeCCHHHHHHHHHHHHHHcCC
Confidence 5677777754 6777777776642 2468999998875422 1 245678888776655554432 257
Q ss_pred ccEEEeCCCCCCCCC--CCcCHHH---HHH----HHHHHHHHHHHhccCCCEEEEE
Q 025715 120 ADLVVCDGAPDVTGL--HDMDEFV---QSQ----LILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 120 ~DlVlsD~~~~~~g~--~~~~~~~---~~~----l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+|+|+.+......+. ...+... ..+ -....++.+...++++|++|..
T Consensus 88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 143 (251)
T 3orf_A 88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLT 143 (251)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEE
Confidence 999999875322211 1111111 111 1133455666677788888864
No 407
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=85.96 E-value=5.5 Score=32.80 Aligned_cols=78 Identities=12% Similarity=0.046 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---C--CCceEeecCCCChhhHHHHHHhc
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---I--EGVIQVQGDITNARTAEVVIRHF 115 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---~--~~v~~~~gDi~~~~~~~~i~~~~ 115 (249)
.++++|=.| |+|++...+++.+.. .+.+|+.+|.++... + .++.++.+|+++.+....+.+.+
T Consensus 26 ~~k~vlVTG-as~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (260)
T 3gem_A 26 SSAPILITG-ASQRVGLHCALRLLE-----------HGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLL 93 (260)
T ss_dssp -CCCEEESS-TTSHHHHHHHHHHHH-----------TTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHH
Confidence 356777777 457778887776642 246899999887431 1 25788899999987655544332
Q ss_pred C--CCcccEEEeCCCCC
Q 025715 116 D--GCKADLVVCDGAPD 130 (249)
Q Consensus 116 ~--~~~~DlVlsD~~~~ 130 (249)
. .+.+|+++.+....
T Consensus 94 ~~~~g~iD~lv~nAg~~ 110 (260)
T 3gem_A 94 KTQTSSLRAVVHNASEW 110 (260)
T ss_dssp HHHCSCCSEEEECCCCC
T ss_pred HHhcCCCCEEEECCCcc
Confidence 1 14799999997543
No 408
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.89 E-value=3.4 Score=32.73 Aligned_cols=70 Identities=20% Similarity=0.132 Sum_probs=50.3
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C-CCceEeecCCCChhhHHHHHHhcCCCc
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I-EGVIQVQGDITNARTAEVVIRHFDGCK 119 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~-~~v~~~~gDi~~~~~~~~i~~~~~~~~ 119 (249)
++||=.| |+|....++++.+-. .+.+|++++.++... + .+++++.+|+++.+..... +. .
T Consensus 5 ~~ilItG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~~--~ 67 (227)
T 3dhn_A 5 KKIVLIG-ASGFVGSALLNEALN-----------RGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEV---CK--G 67 (227)
T ss_dssp CEEEEET-CCHHHHHHHHHHHHT-----------TTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHH---HT--T
T ss_pred CEEEEEc-CCchHHHHHHHHHHH-----------CCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHH---hc--C
Confidence 4677666 678888888877642 246899999986432 2 6789999999997765443 33 5
Q ss_pred ccEEEeCCCC
Q 025715 120 ADLVVCDGAP 129 (249)
Q Consensus 120 ~DlVlsD~~~ 129 (249)
+|.|+....+
T Consensus 68 ~d~vi~~a~~ 77 (227)
T 3dhn_A 68 ADAVISAFNP 77 (227)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEeCcC
Confidence 8999987654
No 409
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=85.86 E-value=5.8 Score=32.22 Aligned_cols=75 Identities=11% Similarity=0.111 Sum_probs=49.4
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHHhcC
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
+++|=.| |+|+....+++.+.. .+.+|+.+|.++.. .++++.++++|+++.+..+.+.+...
T Consensus 3 k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 70 (247)
T 3dii_A 3 RGVIVTG-GGHGIGKQICLDFLE-----------AGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAM 70 (247)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHH
Confidence 4566666 456777777776642 24689999987632 24567788999999876555443221
Q ss_pred C--CcccEEEeCCCC
Q 025715 117 G--CKADLVVCDGAP 129 (249)
Q Consensus 117 ~--~~~DlVlsD~~~ 129 (249)
. +.+|+++.+...
T Consensus 71 ~~~g~id~lv~nAg~ 85 (247)
T 3dii_A 71 EKLQRIDVLVNNACR 85 (247)
T ss_dssp HHHSCCCEEEECCC-
T ss_pred HHcCCCCEEEECCCC
Confidence 1 479999998753
No 410
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=85.84 E-value=0.87 Score=39.25 Aligned_cols=95 Identities=14% Similarity=0.010 Sum_probs=53.6
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--C---CCCceEeecCCCCh-hhHHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---IEGVIQVQGDITNA-RTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--~---~~~v~~~~gDi~~~-~~~~~i~ 112 (249)
+++|.+||-.|+ +|+....+.+.... ...+|+++|.++.+ . --+... ..|..+. +..+.+.
T Consensus 153 ~~~g~~vlI~Ga-~g~iG~~~~~~a~~-----------~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 153 PKEGETVYVSAA-SGAVGQLVGQLAKM-----------MGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALK 219 (345)
T ss_dssp CCTTCEEEESST-TSHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHH
T ss_pred CCCCCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHH
Confidence 468999999996 34444443332210 12689999987532 0 113221 1244332 2223333
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+.. .+.+|+|+... |. ..+..+.++|++||++++
T Consensus 220 ~~~-~~~~d~vi~~~-----g~-------------~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 220 RCF-PNGIDIYFENV-----GG-------------KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp HHC-TTCEEEEEESS-----CH-------------HHHHHHHTTEEEEEEEEE
T ss_pred HHh-CCCCcEEEECC-----CH-------------HHHHHHHHHHhcCCEEEE
Confidence 322 35799998643 21 135677899999999986
No 411
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=85.38 E-value=14 Score=30.43 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=50.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------------CCCceEeecCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------------IEGVIQVQGDIT 103 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------------~~~v~~~~gDi~ 103 (249)
.++++|=.|++ |++...+++.+.. ...+|+.++.+.... -.++.++..|++
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 72 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAAR-----------DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR 72 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHH-----------CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 45677777765 6777777766542 246899998876320 124567899999
Q ss_pred ChhhHHHHHHhcCC--CcccEEEeCCCC
Q 025715 104 NARTAEVVIRHFDG--CKADLVVCDGAP 129 (249)
Q Consensus 104 ~~~~~~~i~~~~~~--~~~DlVlsD~~~ 129 (249)
+.+..+.+.+.+.. +.+|+++.+...
T Consensus 73 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 73 EEDQVRAAVAATVDTFGGIDILVNNASA 100 (274)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 98766554433211 479999999754
No 412
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=85.22 E-value=8 Score=33.39 Aligned_cols=74 Identities=20% Similarity=0.044 Sum_probs=49.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHhc-CCCCCCCCCCCCCCCeEEEecCCCCCC------------------------CCC--
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLY-LPAKLSPDSREGDLPLIVAIDLQPMAP------------------------IEG-- 94 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~-~~~~~~~~~~~~~~~~vvavDi~~~~~------------------------~~~-- 94 (249)
+++||=.| |+|....++++.+- . .+.+|++++...... ..+
T Consensus 2 ~m~vlVTG-atG~iG~~l~~~L~~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (397)
T 1gy8_A 2 HMRVLVCG-GAGYIGSHFVRALLRD-----------TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADR 69 (397)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHH-----------CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHh-----------CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCc
Confidence 35777666 67888888877553 2 236899998764321 124
Q ss_pred -ceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCC
Q 025715 95 -VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 95 -v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
+.++.+|+++.+.+..+.+.+ +.+|+|+...+.
T Consensus 70 ~~~~~~~Dl~d~~~~~~~~~~~--~~~d~vih~A~~ 103 (397)
T 1gy8_A 70 YAALEVGDVRNEDFLNGVFTRH--GPIDAVVHMCAF 103 (397)
T ss_dssp CCEEEESCTTCHHHHHHHHHHS--CCCCEEEECCCC
T ss_pred eEEEEECCCCCHHHHHHHHHhc--CCCCEEEECCCc
Confidence 788999999987665554432 249999998754
No 413
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=85.02 E-value=7.4 Score=31.30 Aligned_cols=77 Identities=14% Similarity=0.050 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.| |+|+....+++.+.. .+.+|+++|.++... -.++.++.+|+++.+..+.
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 77 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFAT-----------AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSA 77 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHT-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHH
Confidence 356777666 678888888887642 246899999875310 1356778899999876555
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+... .+.+|.|+.+...
T Consensus 78 ~~~~~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 78 LADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 443211 1369999998753
No 414
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=85.01 E-value=1.1 Score=38.84 Aligned_cols=97 Identities=8% Similarity=-0.005 Sum_probs=56.4
Q ss_pred ccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHHHh
Q 025715 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
+++|.+||-.|+ .|+....+.+.... ...+|+++|.++.+. . -+... ..|..+.+..+.+.+.
T Consensus 160 ~~~g~~vlV~Ga-~ggiG~~~~~~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 160 VQAGDYVLIHAG-LSGVGTAAIQLTRM-----------AGAIPLVTAGSQKKLQMAEKLGAAA-GFNYKKEDFSEATLKF 226 (354)
T ss_dssp CCTTCEEEESST-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECC-ccHHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHcCCcE-EEecCChHHHHHHHHH
Confidence 468899998884 34555544443221 136899999876321 1 12211 1244444444555554
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.....+|+|+... |.. .+..+.++|++||++++.
T Consensus 227 ~~~~~~d~vi~~~-----G~~-------------~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 227 TKGAGVNLILDCI-----GGS-------------YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TTTSCEEEEEESS-----CGG-------------GHHHHHHHEEEEEEEEEC
T ss_pred hcCCCceEEEECC-----Cch-------------HHHHHHHhccCCCEEEEE
Confidence 4445799998653 210 244567899999999873
No 415
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=84.98 E-value=14 Score=29.88 Aligned_cols=77 Identities=12% Similarity=-0.060 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcC--CC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GC 118 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~--~~ 118 (249)
.++++|=.| |+|+....+++.+.. ...+|+.++.++...-.++..+.+|+++.+....+.+... -+
T Consensus 6 ~~k~vlVTG-as~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 6 SGKNVWVTG-AGKGIGYATALAFVE-----------AGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHH-----------TTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356777777 457788887776642 2468999998764322247788999999876555443221 14
Q ss_pred cccEEEeCCCC
Q 025715 119 KADLVVCDGAP 129 (249)
Q Consensus 119 ~~DlVlsD~~~ 129 (249)
.+|+++.+...
T Consensus 74 ~id~lv~~Ag~ 84 (250)
T 2fwm_X 74 RLDALVNAAGI 84 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999998754
No 416
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=84.89 E-value=5.5 Score=33.71 Aligned_cols=72 Identities=17% Similarity=-0.012 Sum_probs=48.5
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------C-----------CCCceEeecCCCCh
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-----------IEGVIQVQGDITNA 105 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~-----------~~~v~~~~gDi~~~ 105 (249)
++||=.| |+|....++++.+-. .+.+|+++|..... . -.++.++.+|+++.
T Consensus 3 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTG-GAGYIGSHTVLELLE-----------AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEET-TTSHHHHHHHHHHHH-----------TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 4666666 678888888776631 23589999875422 0 13678899999998
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCC
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
+....+.+. ..+|.|+...+.
T Consensus 71 ~~~~~~~~~---~~~d~vih~A~~ 91 (348)
T 1ek6_A 71 GALQRLFKK---YSFMAVIHFAGL 91 (348)
T ss_dssp HHHHHHHHH---CCEEEEEECCSC
T ss_pred HHHHHHHHh---cCCCEEEECCCC
Confidence 765555432 269999987653
No 417
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.79 E-value=6 Score=32.87 Aligned_cols=77 Identities=13% Similarity=0.127 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.|++ |++...+++.+.. ...+|+.++.++... -.++.++++|+++.+..+.
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~ 98 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAE-----------AGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRG 98 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 45677777755 7777777776642 246899999876431 1257788999999876555
Q ss_pred HHHhcCC--CcccEEEeCCCC
Q 025715 111 VIRHFDG--CKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~~--~~~DlVlsD~~~ 129 (249)
+.+.+.. +.+|+++.+...
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 99 MLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 4433211 379999999754
No 418
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=84.73 E-value=5.7 Score=32.48 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CC-CCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~-~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++++|=.| |+|+....+++++.. ...+|+.+|.++.. .+ .++.++++|+++.+....+.+
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 74 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVR-----------EGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIA 74 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHH
Confidence 356777777 557788887776642 24689999987532 11 356788999999876554433
Q ss_pred hcC--CCcccEEEeCCCC
Q 025715 114 HFD--GCKADLVVCDGAP 129 (249)
Q Consensus 114 ~~~--~~~~DlVlsD~~~ 129 (249)
... -+.+|+++.+...
T Consensus 75 ~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 75 ATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHHSSSCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 211 1479999999754
No 419
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=84.46 E-value=4.1 Score=35.29 Aligned_cols=72 Identities=17% Similarity=0.020 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCC-CeEEEecCCCCCC------CCCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-PLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~-~~vvavDi~~~~~------~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.+++||=.| |+|....++++.+-. .+ ..|++++.++... .++++++.+|+++.+... +
T Consensus 31 ~~~~ilVtG-atG~iG~~l~~~L~~-----------~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~---~ 95 (377)
T 2q1s_A 31 ANTNVMVVG-GAGFVGSNLVKRLLE-----------LGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLA---S 95 (377)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHH---H
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHH-----------cCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHH---H
Confidence 457888777 578888888776641 23 6899999876432 247888999999976433 2
Q ss_pred hcCCCcccEEEeCCCC
Q 025715 114 HFDGCKADLVVCDGAP 129 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~ 129 (249)
.+. .+|.|+...+.
T Consensus 96 ~~~--~~d~Vih~A~~ 109 (377)
T 2q1s_A 96 LQD--EYDYVFHLATY 109 (377)
T ss_dssp CCS--CCSEEEECCCC
T ss_pred Hhh--CCCEEEECCCc
Confidence 233 69999987653
No 420
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=84.41 E-value=12 Score=32.27 Aligned_cols=72 Identities=15% Similarity=0.010 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhcC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
.+++||=.| |+|....++++.+-. .+.+|++++.++... ..+++++.+|+++.+....+. .
T Consensus 28 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---~ 92 (379)
T 2c5a_A 28 ENLKISITG-AGGFIASHIARRLKH-----------EGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT---E 92 (379)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH---T
T ss_pred cCCeEEEEC-CccHHHHHHHHHHHH-----------CCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHh---C
Confidence 456888777 578888888776631 236899999876432 247888999999976544433 2
Q ss_pred CCcccEEEeCCCC
Q 025715 117 GCKADLVVCDGAP 129 (249)
Q Consensus 117 ~~~~DlVlsD~~~ 129 (249)
.+|.|+...+.
T Consensus 93 --~~d~Vih~A~~ 103 (379)
T 2c5a_A 93 --GVDHVFNLAAD 103 (379)
T ss_dssp --TCSEEEECCCC
T ss_pred --CCCEEEECcee
Confidence 69999987653
No 421
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=84.40 E-value=4.1 Score=33.41 Aligned_cols=114 Identities=13% Similarity=0.114 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C-CCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I-EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~-~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.|+++|=.|+ +|++...+++.+.. ...+|+.+|.++... + .++.++.+|+++.+..+.+.+
T Consensus 7 ~gk~~lVTGa-s~gIG~a~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (255)
T 4eso_A 7 QGKKAIVIGG-THGMGLATVRRLVE-----------GGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGA 74 (255)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHH
Confidence 4567887775 56777777776642 346899999876321 1 357788999999876555443
Q ss_pred hcC--CCcccEEEeCCCCCCCC-CCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 114 HFD--GCKADLVVCDGAPDVTG-LHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~~~--~~~~DlVlsD~~~~~~g-~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
... -+.+|+++.+......+ ..+.+... ..+. ....++.+...++++|++|..
T Consensus 75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 75 AAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp HHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 221 14799999987533211 11112211 1111 123455556677788988763
No 422
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=84.40 E-value=14 Score=30.41 Aligned_cols=114 Identities=13% Similarity=0.124 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------C----CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------P----IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------~----~~~v~~~~gDi~~~~~~~ 109 (249)
.|+++|=.|++ |++...+++.+.. .+.+|+.++..... . -..+.++.+|+++.+..+
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~ 97 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLAL-----------EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIE 97 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 46788888865 6777777776642 24678888765421 0 135678899999987655
Q ss_pred HHHHhcC--CCcccEEEeCCCCCCCC-CCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 110 VVIRHFD--GCKADLVVCDGAPDVTG-LHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD~~~~~~g-~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+... -+.+|+++.+......+ ..+.+... ..+. ....++.+...++++|++|..
T Consensus 98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 98 QAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 4433221 13799999987543221 11122111 1111 133456666778889998864
No 423
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=84.39 E-value=9.7 Score=31.30 Aligned_cols=114 Identities=14% Similarity=0.029 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------~~~v~~~~gDi~~~~~~~ 109 (249)
.++++|=.|+ .|++...+++++.. ...+|+.++...... -.++.++.+|+++.+...
T Consensus 17 ~~k~~lVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 84 (270)
T 3is3_A 17 DGKVALVTGS-GRGIGAAVAVHLGR-----------LGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIV 84 (270)
T ss_dssp TTCEEEESCT-TSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHH-----------CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Confidence 3567777774 57777777776642 246888877654210 135778899999987655
Q ss_pred HHHHhcC--CCcccEEEeCCCCCCCCC-CCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 110 VVIRHFD--GCKADLVVCDGAPDVTGL-HDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD~~~~~~g~-~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+... -+.+|+++.+......+. .+.+... ..+. ....++.+...++++|++|..
T Consensus 85 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 85 KLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 5443221 136999999875432221 1122211 1111 133455666778889998874
No 424
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.32 E-value=6 Score=33.30 Aligned_cols=114 Identities=12% Similarity=0.162 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CC-CCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~-~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.|+++|=-|++ +|....+++.+.. ...+|+.+|+++.. .+ .++..+++|+++.+..+.+.+
T Consensus 28 ~gKvalVTGas-~GIG~aiA~~la~-----------~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~ 95 (273)
T 4fgs_A 28 NAKIAVITGAT-SGIGLAAAKRFVA-----------EGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYE 95 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCcC-CHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHH
Confidence 46677777755 5677777776642 35789999987632 12 246678999999876655443
Q ss_pred hcC--CCcccEEEeCCCCCC-CCCCCcCH--HH-HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 114 HFD--GCKADLVVCDGAPDV-TGLHDMDE--FV-QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~~~--~~~~DlVlsD~~~~~-~g~~~~~~--~~-~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
... -++.|+++.|..... ....+.+. +. ..+. .....+.+...++++|.+|..
T Consensus 96 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 96 KVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 321 147999999874322 12222222 21 2221 133455667788889988763
No 425
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=84.26 E-value=12 Score=30.76 Aligned_cols=78 Identities=17% Similarity=0.084 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------------C----CCCceEe
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------P----IEGVIQV 98 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------------~----~~~v~~~ 98 (249)
.|+++|=.| |+|++...+++.+.. ...+|+.+|.+... . -.++.++
T Consensus 12 ~gk~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (278)
T 3sx2_A 12 TGKVAFITG-AARGQGRAHAVRLAA-----------DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVAR 79 (278)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHH-----------CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEE
Confidence 356788777 456777777776642 34689999887310 0 1357788
Q ss_pred ecCCCChhhHHHHHHhcC--CCcccEEEeCCCCC
Q 025715 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAPD 130 (249)
Q Consensus 99 ~gDi~~~~~~~~i~~~~~--~~~~DlVlsD~~~~ 130 (249)
.+|+++.+..+.+.+... -+.+|+++.+....
T Consensus 80 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 80 QADVRDRESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 999999876555443221 13799999997543
No 426
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=84.00 E-value=1.6 Score=36.26 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=50.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCccc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~D 121 (249)
+++||=.| + |....++++.+-. .+..|++++.++...-++++++.+|+++.+....+ +. +.+|
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~---~~-~~~d 65 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTA-----------QGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASI---VH-LRPE 65 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHH-----------TTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTG---GG-GCCS
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHH-----------CCCEEEEEeCCccccccCCceEEccCCChHHHHHh---hc-CCCC
Confidence 36788888 5 9999998887641 23589999988755446888999999987653322 22 3599
Q ss_pred EEEeCCC
Q 025715 122 LVVCDGA 128 (249)
Q Consensus 122 lVlsD~~ 128 (249)
.|+...+
T Consensus 66 ~vih~a~ 72 (286)
T 3gpi_A 66 ILVYCVA 72 (286)
T ss_dssp EEEECHH
T ss_pred EEEEeCC
Confidence 9998653
No 427
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=84.00 E-value=3.6 Score=35.83 Aligned_cols=92 Identities=16% Similarity=0.152 Sum_probs=53.5
Q ss_pred CCCeEEEEc-CCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHHHh
Q 025715 41 GVKRVVDLC-AAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 41 ~g~~vLDLG-~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
+|.+||=.| +|+ |..+..+++.++ ..+|+++|.++.+. . -|...+ -|..+ +..+.+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-------------g~~Vi~~~~~~~~~~~~~~lGad~v-i~~~~-~~~~~v~~- 234 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-------------DLTVIATASRPETQEWVKSLGAHHV-IDHSK-PLAAEVAA- 234 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-------------CSEEEEECSSHHHHHHHHHTTCSEE-ECTTS-CHHHHHHT-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-------------CCEEEEEeCCHHHHHHHHHcCCCEE-EeCCC-CHHHHHHH-
Confidence 788999888 433 444444555543 36999999876321 0 122111 12222 22333443
Q ss_pred cCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 115 ~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+..+.+|+|+-. .|. ...+..+.++|++||++++
T Consensus 235 ~~~~g~Dvvid~-----~g~------------~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 235 LGLGAPAFVFST-----THT------------DKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp TCSCCEEEEEEC-----SCH------------HHHHHHHHHHSCTTCEEEE
T ss_pred hcCCCceEEEEC-----CCc------------hhhHHHHHHHhcCCCEEEE
Confidence 355689999853 221 1246778899999999996
No 428
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=83.75 E-value=9.2 Score=32.10 Aligned_cols=73 Identities=16% Similarity=0.059 Sum_probs=48.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------C---CCCceEeecCCCChhhHHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------P---IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------~---~~~v~~~~gDi~~~~~~~~i 111 (249)
+++||=.| |+|....++++.+-.. +...+|+++|..+.. . ..++.++.+|+++.+....+
T Consensus 3 ~m~vlVTG-atG~iG~~l~~~L~~~---------g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 72 (336)
T 2hun_A 3 SMKLLVTG-GMGFIGSNFIRYILEK---------HPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKEL 72 (336)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHH---------CTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred CCeEEEEC-CCchHHHHHHHHHHHh---------CCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHH
Confidence 46777666 5788888887765310 012589999876411 1 13678889999997655444
Q ss_pred HHhcCCCcccEEEeCCCC
Q 025715 112 IRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~ 129 (249)
. ..+|.|+...+.
T Consensus 73 ~-----~~~d~vih~A~~ 85 (336)
T 2hun_A 73 V-----RKVDGVVHLAAE 85 (336)
T ss_dssp H-----HTCSEEEECCCC
T ss_pred h-----hCCCEEEECCCC
Confidence 3 368999987653
No 429
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=83.74 E-value=8.2 Score=31.66 Aligned_cols=114 Identities=12% Similarity=0.064 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------C-CCCceEeecCCCChhh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------P-IEGVIQVQGDITNART 107 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------~-~~~v~~~~gDi~~~~~ 107 (249)
.++++|=-|++ |++...+++.+.. ...+|+.++..... . -.++.++.+|+++.+.
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 77 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFAL-----------ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEE 77 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTT-----------SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 45678877755 6778888877752 34688887764311 0 1246778999999876
Q ss_pred HHHHHHhcCC--CcccEEEeCCCCCCCCC-CCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 108 AEVVIRHFDG--CKADLVVCDGAPDVTGL-HDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 108 ~~~i~~~~~~--~~~DlVlsD~~~~~~g~-~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+.+.+.. +.+|+++.+......+. ...+... ..+. ....+..+...++++|++|..
T Consensus 78 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 78 VAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 6554433211 47999999875332221 1122211 1111 133455556666778888863
No 430
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=83.69 E-value=4 Score=34.92 Aligned_cols=95 Identities=11% Similarity=0.018 Sum_probs=53.8
Q ss_pred cCCCeEEEEcCCCChHHH-HHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCc-eEeecCCCChhhHHHHHH
Q 025715 40 EGVKRVVDLCAAPGSWSQ-VLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGV-IQVQGDITNARTAEVVIR 113 (249)
Q Consensus 40 ~~g~~vLDLG~gpG~~s~-~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v-~~~~gDi~~~~~~~~i~~ 113 (249)
++|.+||=.|+|+.+... .+++.++ ...++++|.++.+. --|. ..+ |..+.+..+.+..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G-------------~~~vi~~~~~~~k~~~a~~lGa~~~i--~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALG-------------AKSVTAIDISSEKLALAKSFGAMQTF--NSSEMSAPQMQSV 223 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHHH
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcC-------------CcEEEEEechHHHHHHHHHcCCeEEE--eCCCCCHHHHHHh
Confidence 689999999987655433 3444544 24678999887431 0122 122 2222222222222
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.-....+|+|+-. .|. ...+..+.++|++||++++.
T Consensus 224 ~~~~~g~d~v~d~-----~G~------------~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 224 LRELRFNQLILET-----AGV------------PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp HGGGCSSEEEEEC-----SCS------------HHHHHHHHHHCCTTCEEEEC
T ss_pred hcccCCccccccc-----ccc------------cchhhhhhheecCCeEEEEE
Confidence 2233568888743 221 12467788999999999874
No 431
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=83.48 E-value=12 Score=31.26 Aligned_cols=114 Identities=8% Similarity=0.038 Sum_probs=67.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------------CCCCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------~~~~v~~~~gDi~~~~~~ 108 (249)
.++++|=.|+ .|++...+++.+.. ...+|+.++.+... .-.++.++.+|+++.+..
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 115 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAR-----------EGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFA 115 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHH
Confidence 3567887785 57778887776642 24688888876321 013577889999998765
Q ss_pred HHHHHhcC--CCcccEEEeCCCCCC--CCCCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 109 EVVIRHFD--GCKADLVVCDGAPDV--TGLHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 109 ~~i~~~~~--~~~~DlVlsD~~~~~--~g~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+.+.+.+. -+.+|+++.+..... ....+.+... ..+. ....++.+...++++|++|..
T Consensus 116 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 116 RSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 54443221 147999999875422 1111222211 1111 133455666778889998864
No 432
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=83.42 E-value=18 Score=29.94 Aligned_cols=75 Identities=12% Similarity=0.072 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---------CCCceEeecCCCChhhHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---------~~~v~~~~gDi~~~~~~~~i 111 (249)
.|+++|=-|++. |....+++++.. ....|+.+|.+.... -.++.++..|+++.+..+.+
T Consensus 6 ~gKvalVTGas~-GIG~aia~~la~-----------~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 73 (258)
T 4gkb_A 6 QDKVVIVTGGAS-GIGGAISMRLAE-----------ERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDA 73 (258)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH-----------TTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH-----------cCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHH
Confidence 456777777654 566666665542 346888889876431 23577889999998765443
Q ss_pred H----HhcCCCcccEEEeCCCC
Q 025715 112 I----RHFDGCKADLVVCDGAP 129 (249)
Q Consensus 112 ~----~~~~~~~~DlVlsD~~~ 129 (249)
. +.+ ++.|+++.+...
T Consensus 74 v~~~~~~~--G~iDiLVNnAGi 93 (258)
T 4gkb_A 74 VAQTIATF--GRLDGLVNNAGV 93 (258)
T ss_dssp HHHHHHHH--SCCCEEEECCCC
T ss_pred HHHHHHHh--CCCCEEEECCCC
Confidence 3 334 479999999754
No 433
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=83.41 E-value=1.2 Score=37.92 Aligned_cols=84 Identities=10% Similarity=0.087 Sum_probs=48.8
Q ss_pred ccCCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHHH
Q 025715 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~~ 113 (249)
+++|.+||=.|+|+ |.....+++..+ .+|++++ ++.+. . -|...+..| .+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~G--------------a~Vi~~~-~~~~~~~~~~lGa~~v~~d---~~------- 194 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAG--------------YVVDLVS-ASLSQALAAKRGVRHLYRE---PS------- 194 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEC-SSCCHHHHHHHTEEEEESS---GG-------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEE-ChhhHHHHHHcCCCEEEcC---HH-------
Confidence 47899999999943 333334555554 6999999 76431 1 133222213 11
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+ ++.+|+|+-- .|.. .+..+.++|+++|++++-
T Consensus 195 ~v-~~g~Dvv~d~-----~g~~-------------~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 195 QV-TQKYFAIFDA-----VNSQ-------------NAAALVPSLKANGHIICI 228 (315)
T ss_dssp GC-CSCEEEEECC-------------------------TTGGGEEEEEEEEEE
T ss_pred Hh-CCCccEEEEC-----CCch-------------hHHHHHHHhcCCCEEEEE
Confidence 23 4689999842 2211 123567899999999974
No 434
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=83.39 E-value=14 Score=30.61 Aligned_cols=66 Identities=21% Similarity=0.114 Sum_probs=44.5
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhcCCCc
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDGCK 119 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~~~~~ 119 (249)
+||=.| |+|....++++.+. ..+.+++++...... ..++.++.+|+++ +....+. . .
T Consensus 3 ~vlVTG-atG~iG~~l~~~L~------------~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~---~--~ 63 (313)
T 3ehe_A 3 LIVVTG-GAGFIGSHVVDKLS------------ESNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYL---K--G 63 (313)
T ss_dssp CEEEET-TTSHHHHHHHHHHT------------TTSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHH---T--T
T ss_pred EEEEEC-CCchHHHHHHHHHH------------hCCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHh---c--C
Confidence 455555 78999999988875 345777776544221 2467889999998 4433332 2 6
Q ss_pred ccEEEeCCC
Q 025715 120 ADLVVCDGA 128 (249)
Q Consensus 120 ~DlVlsD~~ 128 (249)
+|.|+...+
T Consensus 64 ~d~vih~a~ 72 (313)
T 3ehe_A 64 AEEVWHIAA 72 (313)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899988765
No 435
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.38 E-value=4.6 Score=32.84 Aligned_cols=77 Identities=16% Similarity=0.065 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCe-EEEecCCCCC----C----C--CCceEeecCCCCh-hhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA----P----I--EGVIQVQGDITNA-RTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~-vvavDi~~~~----~----~--~~v~~~~gDi~~~-~~~ 108 (249)
.++++|=.|+ +|+....+++.+.. ...+ |+.++.++.. . . .++.++.+|+++. +..
T Consensus 4 ~~k~vlVtGa-s~gIG~~~a~~l~~-----------~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~ 71 (254)
T 1sby_A 4 TNKNVIFVAA-LGGIGLDTSRELVK-----------RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAES 71 (254)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHH
T ss_pred CCcEEEEECC-CChHHHHHHHHHHH-----------CCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHH
Confidence 3567887875 68888888877642 2244 8888887631 0 1 2467789999987 544
Q ss_pred HHHHHhcC--CCcccEEEeCCCC
Q 025715 109 EVVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 109 ~~i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+.+.+. -+.+|+|+.+...
T Consensus 72 ~~~~~~~~~~~g~id~lv~~Ag~ 94 (254)
T 1sby_A 72 KKLLKKIFDQLKTVDILINGAGI 94 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCcc
Confidence 43332211 1369999998753
No 436
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=83.29 E-value=13 Score=30.31 Aligned_cols=78 Identities=9% Similarity=-0.075 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------------CCCceEeecCCCChhh
Q 025715 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------------IEGVIQVQGDITNART 107 (249)
Q Consensus 41 ~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------------~~~v~~~~gDi~~~~~ 107 (249)
.++++|=.|++. |++...+++.+.. ....|+.++.+.... -.++.++..|+++.+.
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~-----------~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~ 87 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAE-----------MGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYES 87 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHH-----------TSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHH-----------CCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHH
Confidence 467888888764 7788877776642 246888888775431 1357788999999876
Q ss_pred HHHHHHhcC--CCcccEEEeCCCC
Q 025715 108 AEVVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 108 ~~~i~~~~~--~~~~DlVlsD~~~ 129 (249)
.+.+.+.+. .+.+|+++.+...
T Consensus 88 v~~~~~~~~~~~g~id~li~nAg~ 111 (267)
T 3gdg_A 88 CEKLVKDVVADFGQIDAFIANAGA 111 (267)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 555443321 1479999999753
No 437
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.25 E-value=5.3 Score=33.63 Aligned_cols=78 Identities=12% Similarity=-0.071 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
.|++||=.|++ |++...+++.+.. .+.+|+.++.++... -.++.++.+|+++.+....
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 97 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFAR-----------RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVR 97 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 45678877765 6777777776642 246899999876320 1357788999999876655
Q ss_pred HHHhcC--CCcccEEEeCCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAPD 130 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~~ 130 (249)
+.+... .+.+|+++.+....
T Consensus 98 ~~~~~~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 98 LADEAFRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHhCCCCCEEEECCCcC
Confidence 443321 14799999997543
No 438
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=82.87 E-value=1.3 Score=38.40 Aligned_cols=91 Identities=15% Similarity=0.115 Sum_probs=53.2
Q ss_pred ccCCCeEEEEcC-CC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~-gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||=.|+ |+ |.....+++..+ .+|+++ .++.+. . -+...+ | .+.+..+.+.
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--------------a~Vi~~-~~~~~~~~~~~lGa~~i--~-~~~~~~~~~~ 209 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARG--------------ARVFAT-ARGSDLEYVRDLGATPI--D-ASREPEDYAA 209 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT--------------CEEEEE-ECHHHHHHHHHHTSEEE--E-TTSCHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCC--------------CEEEEE-eCHHHHHHHHHcCCCEe--c-cCCCHHHHHH
Confidence 478999999984 32 333334454443 688888 554321 0 133332 3 3333334444
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+...+..+|+|+-. .|. ..+..+.++|+++|++++
T Consensus 210 ~~~~~~g~D~vid~-----~g~-------------~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 210 EHTAGQGFDLVYDT-----LGG-------------PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp HHHTTSCEEEEEES-----SCT-------------HHHHHHHHHEEEEEEEEE
T ss_pred HHhcCCCceEEEEC-----CCc-------------HHHHHHHHHHhcCCeEEE
Confidence 44455679999853 221 135677889999999986
No 439
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=82.83 E-value=9.4 Score=31.96 Aligned_cols=71 Identities=18% Similarity=0.142 Sum_probs=48.6
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---CC-CCceEeecCCCChhhHHHHHHhcCCCc
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PI-EGVIQVQGDITNARTAEVVIRHFDGCK 119 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---~~-~~v~~~~gDi~~~~~~~~i~~~~~~~~ 119 (249)
+||=.| |+|....++++.+-. .+.+|++++..+.. .+ .+++++.+|+++.+.+..+.+. ..
T Consensus 3 ~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~ 67 (330)
T 2c20_A 3 SILICG-GAGYIGSHAVKKLVD-----------EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ---EN 67 (330)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH---SC
T ss_pred EEEEEC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh---cC
Confidence 566555 579999888876641 23689999876532 12 2688899999998765554432 36
Q ss_pred ccEEEeCCCC
Q 025715 120 ADLVVCDGAP 129 (249)
Q Consensus 120 ~DlVlsD~~~ 129 (249)
+|.|+...+.
T Consensus 68 ~d~vih~a~~ 77 (330)
T 2c20_A 68 IEAVMHFAAD 77 (330)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999987653
No 440
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=82.57 E-value=21 Score=30.12 Aligned_cols=72 Identities=13% Similarity=0.031 Sum_probs=50.0
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCC-----CeEEEecCCCCCC---CCCceEeecCCCChhhHHHHHHh
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-----PLIVAIDLQPMAP---IEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~-----~~vvavDi~~~~~---~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
++||=.| |+|....++++.+-. .. .+|++++.++... ..+++++.+|+++.+....+.
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 67 (364)
T 2v6g_A 2 SVALIVG-VTGIIGNSLAEILPL-----------ADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKL-- 67 (364)
T ss_dssp EEEEEET-TTSHHHHHHHHHTTS-----------TTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHH--
T ss_pred CEEEEEC-CCcHHHHHHHHHHHh-----------CCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHH--
Confidence 5666666 679999999887742 12 5899999876432 247888999999976554433
Q ss_pred cCCC-cccEEEeCCCC
Q 025715 115 FDGC-KADLVVCDGAP 129 (249)
Q Consensus 115 ~~~~-~~DlVlsD~~~ 129 (249)
.+. .+|.|+...+.
T Consensus 68 -~~~~~~d~vih~a~~ 82 (364)
T 2v6g_A 68 -SPLTDVTHVFYVTWA 82 (364)
T ss_dssp -TTCTTCCEEEECCCC
T ss_pred -hcCCCCCEEEECCCC
Confidence 322 39999987653
No 441
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=82.56 E-value=11 Score=30.37 Aligned_cols=77 Identities=12% Similarity=0.020 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-------CCCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-------~~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++++|=.|+ +|++...+++.+.. ...+|+.++.++... -.++.++.+|+++.+..+.+.+
T Consensus 11 ~~k~vlVTGa-sggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (265)
T 2o23_A 11 KGLVAVITGG-ASGLGLATAERLVG-----------QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALA 78 (265)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH-----------CCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 3567887775 57888888776642 246899999886431 1357788999999876555443
Q ss_pred hcC--CCcccEEEeCCCC
Q 025715 114 HFD--GCKADLVVCDGAP 129 (249)
Q Consensus 114 ~~~--~~~~DlVlsD~~~ 129 (249)
.+. .+.+|+|+.+...
T Consensus 79 ~~~~~~g~id~li~~Ag~ 96 (265)
T 2o23_A 79 LAKGKFGRVDVAVNCAGI 96 (265)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHCCCCCEEEECCcc
Confidence 221 1369999998753
No 442
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=82.49 E-value=6.6 Score=30.20 Aligned_cols=70 Identities=13% Similarity=0.015 Sum_probs=49.2
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhcCCC
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDGC 118 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~~~~ 118 (249)
++||=.| |+|+....+++.+-. ...+|++++.++... ..+++++.+|+++.+..... +.
T Consensus 4 ~~ilVtG-atG~iG~~l~~~l~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~-- 66 (206)
T 1hdo_A 4 KKIAIFG-ATGQTGLTTLAQAVQ-----------AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT---VA-- 66 (206)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHH-----------TTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHH---HT--
T ss_pred CEEEEEc-CCcHHHHHHHHHHHH-----------CCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHH---Hc--
Confidence 5777776 578888888776641 236899999876431 35788899999997654443 33
Q ss_pred cccEEEeCCCC
Q 025715 119 KADLVVCDGAP 129 (249)
Q Consensus 119 ~~DlVlsD~~~ 129 (249)
.+|.|++....
T Consensus 67 ~~d~vi~~a~~ 77 (206)
T 1hdo_A 67 GQDAVIVLLGT 77 (206)
T ss_dssp TCSEEEECCCC
T ss_pred CCCEEEECccC
Confidence 48999987653
No 443
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=82.37 E-value=15 Score=31.36 Aligned_cols=76 Identities=12% Similarity=0.111 Sum_probs=49.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--C--------------CCCceEeecCCCCh
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P--------------IEGVIQVQGDITNA 105 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--~--------------~~~v~~~~gDi~~~ 105 (249)
+++||=.|+ +|++...+++.+.. ...+|+.++.+... . -.++.++.+|+++.
T Consensus 2 ~k~vlVTGa-s~GIG~ala~~L~~-----------~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 69 (327)
T 1jtv_A 2 RTVVLITGC-SSGIGLHLAVRLAS-----------DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS 69 (327)
T ss_dssp CEEEEESCC-SSHHHHHHHHHHHT-----------CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCH
Confidence 345665565 57788888877652 22345555443211 0 03577889999998
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCC
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
+..+.+.+.+..+.+|+++.+...
T Consensus 70 ~~v~~~~~~~~~g~iD~lVnnAG~ 93 (327)
T 1jtv_A 70 KSVAAARERVTEGRVDVLVCNAGL 93 (327)
T ss_dssp HHHHHHHHTCTTSCCSEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCc
Confidence 877776665555689999999754
No 444
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=82.37 E-value=5.4 Score=33.27 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=33.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCccc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~D 121 (249)
+++||=.| |+|....++++.+-. .+.+|++++.++.. ++ ++.+|+++.+....+.+. ..+|
T Consensus 2 ~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~--~~--~~~~Dl~d~~~~~~~~~~---~~~d 62 (315)
T 2ydy_A 2 NRRVLVTG-ATGLLGRAVHKEFQQ-----------NNWHAVGCGFRRAR--PK--FEQVNLLDSNAVHHIIHD---FQPH 62 (315)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHT-----------TTCEEEEEC----------------------CHHHHHH---HCCS
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHh-----------CCCeEEEEccCCCC--CC--eEEecCCCHHHHHHHHHh---hCCC
Confidence 35677666 578899888877642 23689999976533 23 678899887654443322 1589
Q ss_pred EEEeCCCC
Q 025715 122 LVVCDGAP 129 (249)
Q Consensus 122 lVlsD~~~ 129 (249)
.|+...+.
T Consensus 63 ~vih~A~~ 70 (315)
T 2ydy_A 63 VIVHCAAE 70 (315)
T ss_dssp EEEECC--
T ss_pred EEEECCcc
Confidence 99987653
No 445
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=82.35 E-value=6.5 Score=33.46 Aligned_cols=72 Identities=19% Similarity=0.084 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---------------CCCceEeecCCCCh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------------IEGVIQVQGDITNA 105 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---------------~~~v~~~~gDi~~~ 105 (249)
.+++||=.| |+|....++++.+-. .+..|++++.++... ..++.++.+|+++.
T Consensus 26 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 93 (352)
T 1sb8_A 26 QPKVWLITG-VAGFIGSNLLETLLK-----------LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 93 (352)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH
T ss_pred cCCeEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH
Confidence 356888777 579999888776641 236899999865310 15788899999997
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCC
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
+....+. . .+|+|+...+.
T Consensus 94 ~~~~~~~---~--~~d~vih~A~~ 112 (352)
T 1sb8_A 94 DDCNNAC---A--GVDYVLHQAAL 112 (352)
T ss_dssp HHHHHHH---T--TCSEEEECCSC
T ss_pred HHHHHHh---c--CCCEEEECCcc
Confidence 6544433 3 69999987653
No 446
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.14 E-value=9.3 Score=31.16 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.|+ +|++...+++.+.. ...+|+.+|.++... -.++.++.+|+++.+..+.
T Consensus 11 ~~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 78 (256)
T 3gaf_A 11 NDAVAIVTGA-AAGIGRAIAGTFAK-----------AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREA 78 (256)
T ss_dssp TTCEEEECSC-SSHHHHHHHHHHHH-----------HTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4567777775 56677777665531 236899999875320 1357788999999876555
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+... -+.+|+++.+...
T Consensus 79 ~~~~~~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 79 VIKAALDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 443221 1479999999754
No 447
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=81.77 E-value=20 Score=29.21 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=50.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcC--CCc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GCK 119 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~--~~~ 119 (249)
++++|=.|+ +|++...+++.+.. ...+|+.++.++.. ...+.++.+|+++.+..+.+.+... -+.
T Consensus 21 ~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 21 SRSVLVTGG-NRGIGLAIARAFAD-----------AGDKVAITYRSGEP-PEGFLAVKCDITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESSSCC-CTTSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEeCChHh-hccceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 567777775 67778777776542 24688888887643 3457788999999876555433221 146
Q ss_pred ccEEEeCCCC
Q 025715 120 ADLVVCDGAP 129 (249)
Q Consensus 120 ~DlVlsD~~~ 129 (249)
+|+++.+...
T Consensus 88 iD~lv~nAg~ 97 (253)
T 2nm0_A 88 VEVLIANAGV 97 (253)
T ss_dssp CSEEEEECSC
T ss_pred CCEEEECCCC
Confidence 9999988653
No 448
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=81.75 E-value=2.6 Score=40.18 Aligned_cols=45 Identities=11% Similarity=-0.026 Sum_probs=28.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcC---CCCCCCCCCCCCCCeEEEecCCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYL---PAKLSPDSREGDLPLIVAIDLQPM 89 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~---~~~~~~~~~~~~~~~vvavDi~~~ 89 (249)
+..+|+|+|.|+|--...+.+.... .++. ......++++++..|+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~----~~~~~l~~~s~E~~p~ 105 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPN----ATLRRLHYISFEKYPL 105 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTT----SSCCEEEEEEEESSCC
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCC----CCCceEEEEEeeCCCC
Confidence 4579999999999988776553210 0000 0001257999999774
No 449
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=81.48 E-value=4.7 Score=34.97 Aligned_cols=79 Identities=16% Similarity=0.082 Sum_probs=49.9
Q ss_pred cCcccCCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------------------
Q 025715 36 FNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------------- 90 (249)
Q Consensus 36 ~~~~~~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------------------------- 90 (249)
|..+..+.+||=.| |+|....++++.+-. .+.+|+++|.....
T Consensus 5 ~~~~~~~~~vlVTG-~tGfIG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 72 (404)
T 1i24_A 5 HHHHHHGSRVMVIG-GDGYCGWATALHLSK-----------KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72 (404)
T ss_dssp -------CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHH
T ss_pred cccccCCCeEEEeC-CCcHHHHHHHHHHHh-----------CCCeEEEEEecCccccccccccccccccchhhhhhhhHh
Confidence 34456788999776 679999998876631 23689999864210
Q ss_pred --CCCCceEeecCCCChhhHHHHHHhcCCCcccEEEeCCCC
Q 025715 91 --PIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 91 --~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
...++.++.+|+++.+....+.+.. .+|+|+...+.
T Consensus 73 ~~~~~~v~~~~~Dl~d~~~~~~~~~~~---~~D~Vih~A~~ 110 (404)
T 1i24_A 73 ALTGKSIELYVGDICDFEFLAESFKSF---EPDSVVHFGEQ 110 (404)
T ss_dssp HHHCCCCEEEESCTTSHHHHHHHHHHH---CCSEEEECCSC
T ss_pred hccCCceEEEECCCCCHHHHHHHHhcc---CCCEEEECCCC
Confidence 0136788999999987655544322 59999988753
No 450
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.32 E-value=5.4 Score=32.54 Aligned_cols=77 Identities=13% Similarity=-0.013 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecC-CCCC------C----CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL-QPMA------P----IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi-~~~~------~----~~~v~~~~gDi~~~~~~~ 109 (249)
.+++||=.| |+|+....+++++.. ...+|+.++. ++.. . -.++.++.+|+++.+...
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~-----------~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 87 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGR-----------RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVV 87 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 356777666 568888888776642 2368888887 3311 0 135677899999987655
Q ss_pred HHHHhcC--CCcccEEEeCCCC
Q 025715 110 VVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD~~~ 129 (249)
.+.+.+. -+.+|.|+.+...
T Consensus 88 ~~~~~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 88 ALFDKAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHHHHHSCEEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 4433211 1369999998754
No 451
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=81.09 E-value=13 Score=29.57 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=50.1
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CC-CCceEeecCCCChhhHHHHHHhcC
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVIRHFD 116 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~-~~v~~~~gDi~~~~~~~~i~~~~~ 116 (249)
++|=.|+ +|++...+++++.. .+.+|+.++.++.. .+ .++.++.+|+++.+....+.+.+.
T Consensus 3 ~vlVTGa-s~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 70 (230)
T 3guy_A 3 LIVITGA-SSGLGAELAKLYDA-----------EGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLD 70 (230)
T ss_dssp CEEEEST-TSHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCS
T ss_pred EEEEecC-CchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHh
Confidence 3555564 57778887776642 24689999987632 12 357788999999887777766554
Q ss_pred CCcccEEEeCCCC
Q 025715 117 GCKADLVVCDGAP 129 (249)
Q Consensus 117 ~~~~DlVlsD~~~ 129 (249)
..+|+|+.+...
T Consensus 71 -~~~d~lv~~Ag~ 82 (230)
T 3guy_A 71 -SIPSTVVHSAGS 82 (230)
T ss_dssp -SCCSEEEECCCC
T ss_pred -hcCCEEEEeCCc
Confidence 356999998754
No 452
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=81.05 E-value=5.4 Score=31.96 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=46.0
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCcccEE
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlV 123 (249)
+||=.| |+|+...++++.+.. .+.+|++++.++... .. .+.+|+.+.+....+.+.+. +.+|.|
T Consensus 3 ~vlVtG-asg~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~-~~--~~~~D~~~~~~~~~~~~~~~-~~~d~v 66 (255)
T 2dkn_A 3 VIAITG-SASGIGAALKELLAR-----------AGHTVIGIDRGQADI-EA--DLSTPGGRETAVAAVLDRCG-GVLDGL 66 (255)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSSSSE-EC--CTTSHHHHHHHHHHHHHHHT-TCCSEE
T ss_pred EEEEeC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCChhHc-cc--cccCCcccHHHHHHHHHHcC-CCccEE
Confidence 455555 568888888776642 246899999876432 11 25678887766655554442 479999
Q ss_pred EeCCCC
Q 025715 124 VCDGAP 129 (249)
Q Consensus 124 lsD~~~ 129 (249)
+.+...
T Consensus 67 i~~Ag~ 72 (255)
T 2dkn_A 67 VCCAGV 72 (255)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998754
No 453
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.84 E-value=13 Score=30.26 Aligned_cols=78 Identities=19% Similarity=0.106 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------------CCCCceEeecCCCChhh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNART 107 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------------~~~~v~~~~gDi~~~~~ 107 (249)
.++++|=.|++ |+....+++.+.. .+.+|+.++.++.. ...++.++.+|+++.+.
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 73 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLAT-----------DGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTK 73 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHH-----------HTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHH
Confidence 35677777754 6677777665531 23689999987632 11456788999999876
Q ss_pred HHHHHHhcC--CCcccEEEeCCCCC
Q 025715 108 AEVVIRHFD--GCKADLVVCDGAPD 130 (249)
Q Consensus 108 ~~~i~~~~~--~~~~DlVlsD~~~~ 130 (249)
...+.+.+. -+.+|+++.+....
T Consensus 74 v~~~~~~~~~~~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 74 ADTEIKDIHQKYGAVDILVNAAAMF 98 (250)
T ss_dssp HHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcC
Confidence 555443221 14799999997643
No 454
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=80.77 E-value=16 Score=30.32 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C-CCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I-EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~-~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.|+++|=.|+ .|++...+++++.. .+.+|+.+|.++... + .++.++.+|+++.+....+.+
T Consensus 28 ~gk~vlVTGa-s~gIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 95 (277)
T 3gvc_A 28 AGKVAIVTGA-GAGIGLAVARRLAD-----------EGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVD 95 (277)
T ss_dssp TTCEEEETTT-TSTHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHH
Confidence 3567776675 56677777766542 346899999875321 1 357788999999876555443
Q ss_pred hcC--CCcccEEEeCCCC
Q 025715 114 HFD--GCKADLVVCDGAP 129 (249)
Q Consensus 114 ~~~--~~~~DlVlsD~~~ 129 (249)
... -+.+|+++.+...
T Consensus 96 ~~~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 96 ACVAAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 221 1479999998754
No 455
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=80.60 E-value=14 Score=29.75 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.| |+|+....+++.+.. ...+|+.+|.++... -.++.++.+|+++.+....
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 79 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAE-----------AGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQN 79 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 356777777 568888888776642 246899999875310 1357788999999876555
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+... .+.+|+|+.+...
T Consensus 80 ~~~~~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 80 AVRSVHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 443221 1369999998753
No 456
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=80.59 E-value=2.5 Score=31.33 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=58.6
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhcCCC
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDGC 118 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~~~~ 118 (249)
.+|+=+|+ |.+...+++.+.. .+..|+++|.++... -.++..+.||.++.+.+.. ..-.
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~-----------~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~----a~i~ 70 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLA-----------SDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQL----AHLE 70 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHH----TTGG
T ss_pred CCEEEECc--CHHHHHHHHHHHH-----------CCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHh----cCcc
Confidence 46777776 6777777776642 236899999987431 2577889999999775432 2335
Q ss_pred cccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Q 025715 119 KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (249)
Q Consensus 119 ~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k~~ 168 (249)
.+|+|++-.. +..... .+....+.+.|+..++.+..
T Consensus 71 ~ad~vi~~~~---------~~~~n~-----~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 71 CAKWLILTIP---------NGYEAG-----EIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp GCSEEEECCS---------CHHHHH-----HHHHHHHHHCSSSEEEEEES
T ss_pred cCCEEEEECC---------ChHHHH-----HHHHHHHHHCCCCeEEEEEC
Confidence 7899886431 111111 11223456678887776554
No 457
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=80.45 E-value=2 Score=37.26 Aligned_cols=93 Identities=13% Similarity=0.009 Sum_probs=54.0
Q ss_pred ccCCCeEEEEcCCCChHHHH---HHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHH
Q 025715 39 FEGVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 39 ~~~g~~vLDLG~gpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i 111 (249)
+++|.+||=.|+ .|+.... +++..+ .+|+++|.++.+. . -+... .-|..+.+..+.+
T Consensus 165 ~~~g~~VlV~Gg-~g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~ 228 (353)
T 4dup_A 165 LTEGESVLIHGG-TSGIGTTAIQLARAFG--------------AEVYATAGSTGKCEACERLGAKR-GINYRSEDFAAVI 228 (353)
T ss_dssp CCTTCEEEESST-TSHHHHHHHHHHHHTT--------------CEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHH
T ss_pred CCCCCEEEEEcC-CCHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHhcCCCE-EEeCCchHHHHHH
Confidence 478999998753 4444444 444443 6899999876321 0 12111 1133333333444
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.. .+.+|+|+... |. + .+..+.+.|++||++++-
T Consensus 229 ~~~~-~~g~Dvvid~~-----g~---~----------~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 229 KAET-GQGVDIILDMI-----GA---A----------YFERNIASLAKDGCLSII 264 (353)
T ss_dssp HHHH-SSCEEEEEESC-----CG---G----------GHHHHHHTEEEEEEEEEC
T ss_pred HHHh-CCCceEEEECC-----CH---H----------HHHHHHHHhccCCEEEEE
Confidence 4434 56799998643 21 1 245678899999999873
No 458
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=80.37 E-value=5.2 Score=32.38 Aligned_cols=70 Identities=14% Similarity=0.028 Sum_probs=45.3
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCcccEE
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlV 123 (249)
++|=.| |+|+....+++.+.. ...+|++++.++...-. .+.+|+++.+..+.+.+.+ .+++|++
T Consensus 3 ~vlVTG-as~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~---~~~~Dl~~~~~v~~~~~~~-~~~id~l 66 (257)
T 1fjh_A 3 IIVISG-CATGIGAATRKVLEA-----------AGHQIVGIDIRDAEVIA---DLSTAEGRKQAIADVLAKC-SKGMDGL 66 (257)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSSSSEEC---CTTSHHHHHHHHHHHHTTC-TTCCSEE
T ss_pred EEEEeC-CCCHHHHHHHHHHHH-----------CCCEEEEEeCCchhhcc---ccccCCCCHHHHHHHHHHh-CCCCCEE
Confidence 455555 567888888776642 24689999987643111 1567888876665555444 2578999
Q ss_pred EeCCCC
Q 025715 124 VCDGAP 129 (249)
Q Consensus 124 lsD~~~ 129 (249)
+.+...
T Consensus 67 v~~Ag~ 72 (257)
T 1fjh_A 67 VLCAGL 72 (257)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998754
No 459
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=80.17 E-value=16 Score=29.58 Aligned_cols=77 Identities=5% Similarity=-0.027 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCC---CeEEEecCCCCCC---------CCCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL---PLIVAIDLQPMAP---------IEGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~---~~vvavDi~~~~~---------~~~v~~~~gDi~~~~~~ 108 (249)
.++++|=.|+ +|+....+++.+.. .. ..|+.++.++... ..++.++.+|+++.+..
T Consensus 20 ~~k~vlITGa-sggIG~~la~~L~~-----------~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v 87 (267)
T 1sny_A 20 HMNSILITGC-NRGLGLGLVKALLN-----------LPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAY 87 (267)
T ss_dssp CCSEEEESCC-SSHHHHHHHHHHHT-----------SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHh-----------cCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHH
Confidence 3567777774 68888888887652 23 6899999886431 13678889999998766
Q ss_pred HHHHHh----cCCCcccEEEeCCCC
Q 025715 109 EVVIRH----FDGCKADLVVCDGAP 129 (249)
Q Consensus 109 ~~i~~~----~~~~~~DlVlsD~~~ 129 (249)
+.+.+. +....+|+|+.+...
T Consensus 88 ~~~~~~~~~~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 88 DKLVADIEGVTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHHHHHHHHHHGGGCCSEEEECCCC
T ss_pred HHHHHHHHHhcCCCCccEEEECCCc
Confidence 555433 221269999998753
No 460
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=80.15 E-value=5.4 Score=32.68 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C---CCCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P---IEGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~---~~~v~~~~gDi~~~~~~ 108 (249)
.++++|=.| |+|+....+++.+.. .+.+|+.++.++.. . -.++.++.+|+++.+..
T Consensus 6 ~~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v 73 (267)
T 2gdz_A 6 NGKVALVTG-AAQGIGRAFAEALLL-----------KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL 73 (267)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHH
T ss_pred CCCEEEEEC-CCCcHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHH
Confidence 356777777 467778877776642 24689999887521 0 12467789999998765
Q ss_pred HHHHHhcC--CCcccEEEeCCCC
Q 025715 109 EVVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 109 ~~i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+.+... -+.+|+++.+...
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 74 RDTFRKVVDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 55433221 1369999998753
No 461
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=80.10 E-value=11 Score=30.61 Aligned_cols=69 Identities=14% Similarity=0.122 Sum_probs=48.5
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-CCCceEeecCCCChhhHHHHHHhcCCCcccE
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFDGCKADL 122 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-~~~v~~~~gDi~~~~~~~~i~~~~~~~~~Dl 122 (249)
+||=.| |+|+...++++.+-. ...+|++++.++... ..++.++.+|+++.+....+. . .+|.
T Consensus 4 ~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~--~~d~ 66 (267)
T 3ay3_A 4 RLLVTG-AAGGVGSAIRPHLGT-----------LAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLV---K--DCDG 66 (267)
T ss_dssp EEEEES-TTSHHHHHHGGGGGG-----------TEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHH---T--TCSE
T ss_pred eEEEEC-CCCHHHHHHHHHHHh-----------CCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHH---c--CCCE
Confidence 566556 568999998887642 235899999887532 246788899999976554433 3 4899
Q ss_pred EEeCCCC
Q 025715 123 VVCDGAP 129 (249)
Q Consensus 123 VlsD~~~ 129 (249)
|++....
T Consensus 67 vi~~a~~ 73 (267)
T 3ay3_A 67 IIHLGGV 73 (267)
T ss_dssp EEECCSC
T ss_pred EEECCcC
Confidence 9988654
No 462
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=80.06 E-value=2.6 Score=36.47 Aligned_cols=95 Identities=17% Similarity=0.010 Sum_probs=56.2
Q ss_pred ccCC--CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCC-eEEEecCCCCC-----CCCCceEeecCCCChhhHHH
Q 025715 39 FEGV--KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMA-----PIEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 39 ~~~g--~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~-~vvavDi~~~~-----~~~~v~~~~gDi~~~~~~~~ 110 (249)
+++| .+||=.|++ |+....+.+.... ... +|+++|.++.+ ..-+... ..|..+.+..+.
T Consensus 156 ~~~g~~~~vlI~Gas-ggiG~~~~~~a~~-----------~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~ 222 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAA-GACGSVAGQIGHF-----------LGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQ 222 (357)
T ss_dssp CCTTSCCEEEESSTT-BHHHHHHHHHHHH-----------TTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHH
T ss_pred CCCCCccEEEEECCC-cHHHHHHHHHHHH-----------CCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHH
Confidence 4678 999999873 5555554443221 125 89999987532 1013221 224444444444
Q ss_pred HHHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+.+.... .+|+|+... |. ..+..+.++|++||++++
T Consensus 223 ~~~~~~~-~~d~vi~~~-----G~-------------~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 223 LRESCPA-GVDVYFDNV-----GG-------------NISDTVISQMNENSHIIL 258 (357)
T ss_dssp HHHHCTT-CEEEEEESC-----CH-------------HHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCC-CCCEEEECC-----CH-------------HHHHHHHHHhccCcEEEE
Confidence 5444333 799999653 20 245678899999999986
No 463
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=80.05 E-value=23 Score=28.98 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=50.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----CCCCceEeecCCCChhhHHHHHHhcC-
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD- 116 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----~~~~v~~~~gDi~~~~~~~~i~~~~~- 116 (249)
++++|=-|+ +|++...+++.+.. .+.+|+.++.++.. ...++.++.+|+++.+..+.+.+...
T Consensus 16 ~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (266)
T 3p19_A 16 KKLVVITGA-SSGIGEAIARRFSE-----------EGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEK 83 (266)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHH
Confidence 456777775 57777777776642 24689999887522 12467788999999876555443221
Q ss_pred -CCcccEEEeCCCC
Q 025715 117 -GCKADLVVCDGAP 129 (249)
Q Consensus 117 -~~~~DlVlsD~~~ 129 (249)
-+.+|+++.+...
T Consensus 84 ~~g~iD~lvnnAg~ 97 (266)
T 3p19_A 84 IYGPADAIVNNAGM 97 (266)
T ss_dssp HHCSEEEEEECCCC
T ss_pred HCCCCCEEEECCCc
Confidence 1379999999754
No 464
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=79.96 E-value=7.6 Score=32.16 Aligned_cols=74 Identities=12% Similarity=0.062 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------~~~v~~~~gDi~~~~~~~ 109 (249)
.+++||=.| |+|+....+++.+.. .+.+|++++.++... -.++.++.+|+++.+...
T Consensus 27 ~~k~vlITG-asggIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~ 94 (286)
T 1xu9_A 27 QGKKVIVTG-ASKGIGREMAYHLAK-----------MGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAE 94 (286)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHH
Confidence 456788777 557888887776541 246899999875320 124678899999987655
Q ss_pred HHHHhcC--CCcccEEEeC
Q 025715 110 VVIRHFD--GCKADLVVCD 126 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD 126 (249)
.+.+.+. .+.+|+|+.+
T Consensus 95 ~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 95 QFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHHHHTSCSEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEC
Confidence 5443221 1369999988
No 465
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=79.95 E-value=9.8 Score=33.45 Aligned_cols=74 Identities=15% Similarity=0.130 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCC-CeEEEecCCCCCC--------------CCCceEeecCCCCh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-PLIVAIDLQPMAP--------------IEGVIQVQGDITNA 105 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~-~~vvavDi~~~~~--------------~~~v~~~~gDi~~~ 105 (249)
.+++||=.| |+|+...++++.+-. .+ ..|+++|.++... -.++.++.+|+++.
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~-----------~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~ 101 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFK-----------RNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSI 101 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHT-----------TCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSH
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHH-----------CCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCH
Confidence 357888777 569999988887752 22 4899999876321 14688899999998
Q ss_pred hhHHHHHHhcCCCcccEEEeCCCC
Q 025715 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 106 ~~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
+....+. ....+|.|+...+.
T Consensus 102 ~~~~~~~---~~~~~D~Vih~Aa~ 122 (399)
T 3nzo_A 102 EYDAFIK---ADGQYDYVLNLSAL 122 (399)
T ss_dssp HHHHHHH---HCCCCSEEEECCCC
T ss_pred HHHHHHH---HhCCCCEEEECCCc
Confidence 7554443 23579999987653
No 466
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=79.94 E-value=12 Score=29.17 Aligned_cols=67 Identities=13% Similarity=0.005 Sum_probs=47.1
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC---CCCceEeecCCCChhhHHHHHHhcCCCcc
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---IEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~---~~~v~~~~gDi~~~~~~~~i~~~~~~~~~ 120 (249)
+||=.| |+|....++++.+-. .+.+|++++.++... .++++++.+|+++.+. +.+ ..+
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~-----~~~--~~~ 62 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKN-----------RGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL-----SDL--SDQ 62 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH-----HHH--TTC
T ss_pred eEEEEc-CCchhHHHHHHHHHh-----------CCCEEEEEEcCchhhhhccCCCeEEeccccChhh-----hhh--cCC
Confidence 555555 578888888776631 236899999886431 1688999999998764 223 358
Q ss_pred cEEEeCCCC
Q 025715 121 DLVVCDGAP 129 (249)
Q Consensus 121 DlVlsD~~~ 129 (249)
|.|++....
T Consensus 63 d~vi~~ag~ 71 (221)
T 3ew7_A 63 NVVVDAYGI 71 (221)
T ss_dssp SEEEECCCS
T ss_pred CEEEECCcC
Confidence 999988754
No 467
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=79.91 E-value=4.6 Score=35.09 Aligned_cols=94 Identities=17% Similarity=0.144 Sum_probs=54.3
Q ss_pred ccCCCeEEEEcC-C-CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHH
Q 025715 39 FEGVKRVVDLCA-A-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (249)
Q Consensus 39 ~~~g~~vLDLG~-g-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~ 112 (249)
+++|.+||=.|+ | -|.....+++..+ .+|++++.++.+. . -+...+ -|..+.+..+.+.
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--------------a~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~ 225 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAK--------------CHVIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLK 225 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTT--------------CEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHH
Confidence 478999999993 3 3444444555544 6899999875321 0 122111 1222322333343
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~k 166 (249)
+. ....+|+|+... |. ..+..+.++|+++|++++-
T Consensus 226 ~~-~~~g~D~vid~~-----g~-------------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 226 QE-YPEGVDVVYESV-----GG-------------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp HH-CTTCEEEEEECS-----CT-------------HHHHHHHHHEEEEEEEEEC
T ss_pred Hh-cCCCCCEEEECC-----CH-------------HHHHHHHHHHhcCCEEEEE
Confidence 33 335799998642 21 1356678999999998873
No 468
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=79.88 E-value=2.5 Score=35.66 Aligned_cols=87 Identities=15% Similarity=0.148 Sum_probs=50.9
Q ss_pred ccCCCeEEEEcC-C-CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCC-hhhHHHH
Q 025715 39 FEGVKRVVDLCA-A-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITN-ARTAEVV 111 (249)
Q Consensus 39 ~~~g~~vLDLG~-g-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~-~~~~~~i 111 (249)
+++|.+||=.|+ | -|.....+++..+ .+|+++|.++.+. . -+...+ .|..+ .+ +
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~----~ 183 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--------------LRVLAAASRPEKLALPLALGAEEA-ATYAEVPE----R 183 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--------------CEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHH----H
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--------------CEEEEEeCCHHHHHHHHhcCCCEE-EECCcchh----H
Confidence 678999999996 2 2333333444443 6899999876431 1 122111 13322 22 2
Q ss_pred HHhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 112 ~~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
.+.+ +.+|+|+. ... . .+..+.++|+++|++++
T Consensus 184 ~~~~--~~~d~vid-~g~-----~-------------~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 184 AKAW--GGLDLVLE-VRG-----K-------------EVEESLGLLAHGGRLVY 216 (302)
T ss_dssp HHHT--TSEEEEEE-CSC-----T-------------THHHHHTTEEEEEEEEE
T ss_pred HHHh--cCceEEEE-CCH-----H-------------HHHHHHHhhccCCEEEE
Confidence 2223 46999986 421 0 24567889999999886
No 469
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.79 E-value=17 Score=29.66 Aligned_cols=76 Identities=16% Similarity=0.046 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------C----CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P----IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~----~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=-|++ |++...+++.+.. ...+|+.+|.++.. . -.++.++++|+++.+..+.
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 77 (264)
T 3ucx_A 10 TDKVVVISGVG-PALGTTLARRCAE-----------QGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAH 77 (264)
T ss_dssp TTCEEEEESCC-TTHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCcEEEEECCC-cHHHHHHHHHHHH-----------CcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 35678877765 5566666665531 24689999987532 0 1357788999999876555
Q ss_pred HHHhcC--CCcccEEEeCCC
Q 025715 111 VIRHFD--GCKADLVVCDGA 128 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~ 128 (249)
+.+.+. -+++|+++.+..
T Consensus 78 ~~~~~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 78 LVDETMKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHcCCCcEEEECCC
Confidence 443221 147999999874
No 470
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=79.78 E-value=18 Score=29.22 Aligned_cols=76 Identities=11% Similarity=0.008 Sum_probs=50.1
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------C----CCCceEeecCCCChhhHHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P----IEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~----~~~v~~~~gDi~~~~~~~~i 111 (249)
++++|=.|+ +|+....+++.+.. .+.+|+.++.++.. . -.++.++.+|+++.+..+.+
T Consensus 7 ~k~~lVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~ 74 (247)
T 2jah_A 7 GKVALITGA-SSGIGEATARALAA-----------EGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAA 74 (247)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 567777775 57788887776642 24688898887521 0 12467789999998765544
Q ss_pred HHhcC--CCcccEEEeCCCC
Q 025715 112 IRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 112 ~~~~~--~~~~DlVlsD~~~ 129 (249)
.+... -+.+|+++.+...
T Consensus 75 ~~~~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 75 VASTVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 43221 1469999998754
No 471
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=79.72 E-value=17 Score=28.95 Aligned_cols=76 Identities=13% Similarity=0.160 Sum_probs=49.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------C-CCCceEeecCCCChhhHHH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------P-IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------~-~~~v~~~~gDi~~~~~~~~ 110 (249)
++++|=.| |+|+....+++++.. ...+|+.++.++.. . -.++.++.+|+++.+....
T Consensus 2 ~k~vlItG-asggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 69 (250)
T 2cfc_A 2 SRVAIVTG-ASSGNGLAIATRFLA-----------RGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNA 69 (250)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 35667667 458888888776642 23689999887521 0 1246788999999876555
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+.+. -+.+|+|+.+...
T Consensus 70 ~~~~~~~~~~~id~li~~Ag~ 90 (250)
T 2cfc_A 70 AIAATMEQFGAIDVLVNNAGI 90 (250)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 443221 1369999998753
No 472
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=79.61 E-value=11 Score=31.18 Aligned_cols=77 Identities=10% Similarity=-0.022 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------~~~v~~~~gDi~~~~~~~ 109 (249)
.++++|=.| |+|+...++++.+.. .+.+|+.++.++... -.++.++.+|+++.+...
T Consensus 25 ~~k~vlITG-asggiG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~ 92 (302)
T 1w6u_A 25 QGKVAFITG-GGTGLGKGMTTLLSS-----------LGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQ 92 (302)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHH
Confidence 356777777 467888888776642 246899999875320 135778899999987655
Q ss_pred HHHHhcC--CCcccEEEeCCCC
Q 025715 110 VVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD~~~ 129 (249)
.+.+... .+.+|+|+.+...
T Consensus 93 ~~~~~~~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 93 NTVSELIKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHHHHHHHTCSCSEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 5443221 1468999998753
No 473
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=79.53 E-value=5.8 Score=33.54 Aligned_cols=73 Identities=18% Similarity=0.164 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCC-------CeEEEecCCCCCC----CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-------PLIVAIDLQPMAP----IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~-------~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~ 109 (249)
.+++||=.| |+|....++++.+-. .+ .+|+++|.++... ..++.++.+|+++.+...
T Consensus 13 ~~~~vlVtG-a~G~iG~~l~~~L~~-----------~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 80 (342)
T 2hrz_A 13 QGMHIAIIG-AAGMVGRKLTQRLVK-----------DGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAE 80 (342)
T ss_dssp SCEEEEEET-TTSHHHHHHHHHHHH-----------HCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHH
T ss_pred cCCEEEEEC-CCcHHHHHHHHHHHh-----------cCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHH
Confidence 456788777 568888888776641 12 3799999876321 235778899999987654
Q ss_pred HHHHhcCCCcccEEEeCCCC
Q 025715 110 VVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 110 ~i~~~~~~~~~DlVlsD~~~ 129 (249)
.+.+ +.+|.|+...+.
T Consensus 81 ~~~~----~~~d~vih~A~~ 96 (342)
T 2hrz_A 81 KLVE----ARPDVIFHLAAI 96 (342)
T ss_dssp HHHH----TCCSEEEECCCC
T ss_pred HHHh----cCCCEEEECCcc
Confidence 4432 369999988653
No 474
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=79.34 E-value=16 Score=29.47 Aligned_cols=77 Identities=10% Similarity=0.015 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------~~~v~~~~gDi~~~~~~~ 109 (249)
.++++|=.| |+|+...++++++.. ...+|+.++.++... -.++.++.+|+++.+..+
T Consensus 13 ~~k~vlITG-asggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~ 80 (265)
T 1h5q_A 13 VNKTIIVTG-GNRGIGLAFTRAVAA-----------AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVT 80 (265)
T ss_dssp TTEEEEEET-TTSHHHHHHHHHHHH-----------TTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHH-----------CCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHH
Confidence 356777777 468888888776642 236899999865321 135778899999987655
Q ss_pred HHHHhcC--CCcccEEEeCCCC
Q 025715 110 VVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD~~~ 129 (249)
.+.+.+. -+.+|.|+.+...
T Consensus 81 ~~~~~~~~~~~~id~li~~Ag~ 102 (265)
T 1h5q_A 81 KTIQQIDADLGPISGLIANAGV 102 (265)
T ss_dssp HHHHHHHHHSCSEEEEEECCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCc
Confidence 5443321 1469999998754
No 475
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=79.34 E-value=9.4 Score=32.76 Aligned_cols=72 Identities=15% Similarity=0.031 Sum_probs=48.0
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC----------------CCCCceEeecCCCChh
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDITNAR 106 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~----------------~~~~v~~~~gDi~~~~ 106 (249)
++||=.| |+|....++++.+-. .+..|++++.++.. ...++.++.+|+++.+
T Consensus 25 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~ 92 (375)
T 1t2a_A 25 NVALITG-ITGQDGSYLAEFLLE-----------KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDST 92 (375)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHH
T ss_pred cEEEEEC-CCchHHHHHHHHHHH-----------CCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHH
Confidence 3677666 578888888776631 23689999887532 1135778899999987
Q ss_pred hHHHHHHhcCCCcccEEEeCCCC
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
....+.+.. .+|.|+...+.
T Consensus 93 ~~~~~~~~~---~~d~vih~A~~ 112 (375)
T 1t2a_A 93 CLVKIINEV---KPTEIYNLGAQ 112 (375)
T ss_dssp HHHHHHHHH---CCSEEEECCSC
T ss_pred HHHHHHHhc---CCCEEEECCCc
Confidence 655544322 58999987653
No 476
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=79.30 E-value=3.2 Score=30.53 Aligned_cols=68 Identities=18% Similarity=0.039 Sum_probs=47.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhcCC
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDG 117 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~~~ 117 (249)
..+|+=+|+ |.+...+++.+.. .+..|+++|.++... -.++.++.+|.++.+.+.. ..-
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~-----------~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~----~~~ 68 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTA-----------AGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRS----LDL 68 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHH----SCC
T ss_pred CCEEEEECC--CHHHHHHHHHHHH-----------CCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHh----CCc
Confidence 357888887 6688888776642 235899999987431 2467788999999765432 233
Q ss_pred CcccEEEeC
Q 025715 118 CKADLVVCD 126 (249)
Q Consensus 118 ~~~DlVlsD 126 (249)
..+|+|+.-
T Consensus 69 ~~~d~vi~~ 77 (141)
T 3llv_A 69 EGVSAVLIT 77 (141)
T ss_dssp TTCSEEEEC
T ss_pred ccCCEEEEe
Confidence 578998864
No 477
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=79.29 E-value=23 Score=28.56 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC------C-CCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I-EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~------~-~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.++++|=.|+ +|++...+++++.. .+.+|+.+|.++... + .++.++.+|+++.+....+.+
T Consensus 6 ~~k~~lVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 73 (257)
T 3tpc_A 6 KSRVFIVTGA-SSGLGAAVTRMLAQ-----------EGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALA 73 (257)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence 3567777775 46777777776642 246899999886431 1 257788999999876555443
Q ss_pred hcC--CCcccEEEeCCCC
Q 025715 114 HFD--GCKADLVVCDGAP 129 (249)
Q Consensus 114 ~~~--~~~~DlVlsD~~~ 129 (249)
... -+.+|+++.+...
T Consensus 74 ~~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 74 FAKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 221 1379999998754
No 478
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=79.18 E-value=12 Score=30.62 Aligned_cols=77 Identities=10% Similarity=-0.039 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----------~~~v~~~~gDi~~~~~~~~ 110 (249)
.++++|=.| |+|+....+++.+.. .+..|+.+|.++... -.++.++.+|+++.+....
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 97 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAK-----------LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYS 97 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHH-----------CCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHH
Confidence 356777777 567888888776642 246899999875320 1357788999999876555
Q ss_pred HHHhcC--CCcccEEEeCCCC
Q 025715 111 VIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~--~~~~DlVlsD~~~ 129 (249)
+.+.+. -+.+|+|+.+...
T Consensus 98 ~~~~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 98 SAKKVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHHHHHHTCCCSEEEECCCC
T ss_pred HHHHHHHHCCCCcEEEECCCc
Confidence 443221 1369999998754
No 479
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=79.17 E-value=17 Score=29.84 Aligned_cols=63 Identities=21% Similarity=0.345 Sum_probs=43.8
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCCCCCceEeecCCCChhhHHHHHHhcCCCcccEE
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~DlV 123 (249)
+||=.| |+|....++++.+- .+.+|++++.++ .++.+|+.+.+......+. ..+|.|
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~------------~g~~V~~~~r~~-------~~~~~D~~d~~~~~~~~~~---~~~d~v 58 (299)
T 1n2s_A 2 NILLFG-KTGQVGWELQRSLA------------PVGNLIALDVHS-------KEFCGDFSNPKGVAETVRK---LRPDVI 58 (299)
T ss_dssp EEEEEC-TTSHHHHHHHHHTT------------TTSEEEEECTTC-------SSSCCCTTCHHHHHHHHHH---HCCSEE
T ss_pred eEEEEC-CCCHHHHHHHHHhh------------cCCeEEEecccc-------ccccccCCCHHHHHHHHHh---cCCCEE
Confidence 455555 68999999988774 136899998776 2457899987655444332 258999
Q ss_pred EeCCCC
Q 025715 124 VCDGAP 129 (249)
Q Consensus 124 lsD~~~ 129 (249)
+...+.
T Consensus 59 ih~a~~ 64 (299)
T 1n2s_A 59 VNAAAH 64 (299)
T ss_dssp EECCCC
T ss_pred EECccc
Confidence 987653
No 480
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=79.14 E-value=24 Score=28.58 Aligned_cols=77 Identities=19% Similarity=0.188 Sum_probs=49.3
Q ss_pred CCCeEEEEcCC-CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------C--CCCceEeecCCCChhhH
Q 025715 41 GVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P--IEGVIQVQGDITNARTA 108 (249)
Q Consensus 41 ~g~~vLDLG~g-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~--~~~v~~~~gDi~~~~~~ 108 (249)
.++++|=.|+. . ++...+++.+.. ...+|+.+|.++.. . -.++.++.+|+++.+..
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v 88 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALL-----------EGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAV 88 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHH-----------CCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHH
Confidence 45678877763 4 455555555431 24689999887531 1 13678899999998765
Q ss_pred HHHHHhcC--CCcccEEEeCCCC
Q 025715 109 EVVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 109 ~~i~~~~~--~~~~DlVlsD~~~ 129 (249)
..+.+.+. .+++|+++.+...
T Consensus 89 ~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 89 DALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCcEEEECCCc
Confidence 55443321 1379999999754
No 481
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=79.04 E-value=4 Score=35.14 Aligned_cols=72 Identities=13% Similarity=0.174 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCC-CC-eEEEecCCCCCC--------CCCceEeecCCCChhhHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGD-LP-LIVAIDLQPMAP--------IEGVIQVQGDITNARTAEV 110 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~-~~-~vvavDi~~~~~--------~~~v~~~~gDi~~~~~~~~ 110 (249)
.+++||=.| |+|++...+++.+-. . +. +|++++.++... -.++.++.+|+++.+.+..
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~-----------~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~ 87 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLD-----------TTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNY 87 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------HCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHh-----------hCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH
Confidence 357888776 679999988776631 1 23 899999875321 2478889999999765433
Q ss_pred HHHhcCCCcccEEEeCCCC
Q 025715 111 VIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 111 i~~~~~~~~~DlVlsD~~~ 129 (249)
.+. .+|+|+...+.
T Consensus 88 ---~~~--~~D~Vih~Aa~ 101 (344)
T 2gn4_A 88 ---ALE--GVDICIHAAAL 101 (344)
T ss_dssp ---HTT--TCSEEEECCCC
T ss_pred ---HHh--cCCEEEECCCC
Confidence 333 58999988753
No 482
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=78.91 E-value=13 Score=30.87 Aligned_cols=76 Identities=13% Similarity=0.078 Sum_probs=50.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------------CCCCceEeecCCCChh
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITNAR 106 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------------~~~~v~~~~gDi~~~~ 106 (249)
+++||=.|+ +|+....+++.+.. .+.+|+.++.++.. .-.++.++.+|+++.+
T Consensus 18 ~k~vlVTGa-sggIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T 1yxm_A 18 GQVAIVTGG-ATGIGKAIVKELLE-----------LGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEE 85 (303)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHH
Confidence 567887774 68888888776642 24689998887521 1135778899999987
Q ss_pred hHHHHHHhcC--CCcccEEEeCCCC
Q 025715 107 TAEVVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 107 ~~~~i~~~~~--~~~~DlVlsD~~~ 129 (249)
..+.+.+... -+.+|+|+.+...
T Consensus 86 ~v~~~~~~~~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 86 EVNNLVKSTLDTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6555443211 1369999998753
No 483
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=78.81 E-value=7.9 Score=32.20 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CC-CCceEeecCCCChhhHHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVIR 113 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~-~~v~~~~gDi~~~~~~~~i~~ 113 (249)
.|+++|=-|++ |++..++++.+.. .+.+|+.++.++.. .+ .++.++.+|+++.+....+.+
T Consensus 15 ~gk~vlVTGas-~gIG~~~a~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 82 (291)
T 3rd5_A 15 AQRTVVITGAN-SGLGAVTARELAR-----------RGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFAD 82 (291)
T ss_dssp TTCEEEEECCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHH
Confidence 46778877754 7788887776642 24689999987632 12 357888999999988777766
Q ss_pred hcCCCcccEEEeCCCC
Q 025715 114 HFDGCKADLVVCDGAP 129 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~ 129 (249)
.+ +.+|+++.+...
T Consensus 83 ~~--~~iD~lv~nAg~ 96 (291)
T 3rd5_A 83 GV--SGADVLINNAGI 96 (291)
T ss_dssp TC--CCEEEEEECCCC
T ss_pred hc--CCCCEEEECCcC
Confidence 55 479999999753
No 484
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=78.73 E-value=4.5 Score=34.81 Aligned_cols=89 Identities=9% Similarity=0.059 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCCChHHHH---HHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCce-EeecCCCChhhHHHHH
Q 025715 41 GVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVI-QVQGDITNARTAEVVI 112 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~-~~~gDi~~~~~~~~i~ 112 (249)
+|.+||=.| |.|+.... +++..+ .+|+++|.++.+. . -+.. .+ |..+ +..+.+.
T Consensus 150 ~g~~VlV~g-g~G~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~-~~~~~~~ 211 (346)
T 3fbg_A 150 EGKTLLIIN-GAGGVGSIATQIAKAYG--------------LRVITTASRNETIEWTKKMGADIVL--NHKE-SLLNQFK 211 (346)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTT--------------CEEEEECCSHHHHHHHHHHTCSEEE--CTTS-CHHHHHH
T ss_pred CCCEEEEEc-CCCHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHhcCCcEEE--ECCc-cHHHHHH
Confidence 789999885 23444444 444443 6999999876321 0 1221 12 2222 2333444
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
+. ..+.+|+|+-. .|. ...+..+.++|+++|+++.
T Consensus 212 ~~-~~~g~Dvv~d~-----~g~------------~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 212 TQ-GIELVDYVFCT-----FNT------------DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HH-TCCCEEEEEES-----SCH------------HHHHHHHHHHEEEEEEEEE
T ss_pred Hh-CCCCccEEEEC-----CCc------------hHHHHHHHHHhccCCEEEE
Confidence 43 55689999853 221 1245678899999999975
No 485
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=78.67 E-value=14 Score=30.31 Aligned_cols=77 Identities=16% Similarity=0.095 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CCCCceEeecCCCChhhHHHHHHh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~~~v~~~~gDi~~~~~~~~i~~~ 114 (249)
.++++|=.|+ +|+....+++.+.. .+.+|+.+|.++.. .+.++.++.+|+++.+..+.+.+.
T Consensus 8 ~~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 75 (270)
T 1yde_A 8 AGKVVVVTGG-GRGIGAGIVRAFVN-----------SGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSE 75 (270)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHH
Confidence 3567777774 57778887776642 24689999887532 134577889999998765554432
Q ss_pred cC--CCcccEEEeCCCC
Q 025715 115 FD--GCKADLVVCDGAP 129 (249)
Q Consensus 115 ~~--~~~~DlVlsD~~~ 129 (249)
.. -+.+|+++.+...
T Consensus 76 ~~~~~g~iD~lv~nAg~ 92 (270)
T 1yde_A 76 TIRRFGRLDCVVNNAGH 92 (270)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11 1369999998753
No 486
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=78.58 E-value=20 Score=29.92 Aligned_cols=71 Identities=13% Similarity=-0.013 Sum_probs=48.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC--C--CCceEeecCCCChhhHHHHHHhcCC
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRHFDG 117 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~--~--~~v~~~~gDi~~~~~~~~i~~~~~~ 117 (249)
.++||=.| |+|....++++.+-. .+.+|++++.++... + .+++++.+|+++.+.... .+.
T Consensus 13 ~M~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~---~~~- 76 (342)
T 2x4g_A 13 HVKYAVLG-ATGLLGHHAARAIRA-----------AGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLER---ALR- 76 (342)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHH-----------TTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHH---HTT-
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHH---HHc-
Confidence 35788777 579999888776641 236899999876432 2 278889999999765433 333
Q ss_pred CcccEEEeCCCC
Q 025715 118 CKADLVVCDGAP 129 (249)
Q Consensus 118 ~~~DlVlsD~~~ 129 (249)
.+|.|+...+.
T Consensus 77 -~~d~vih~a~~ 87 (342)
T 2x4g_A 77 -GLDGVIFSAGY 87 (342)
T ss_dssp -TCSEEEEC---
T ss_pred -CCCEEEECCcc
Confidence 59999987653
No 487
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=78.56 E-value=14 Score=30.42 Aligned_cols=78 Identities=8% Similarity=-0.020 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCC-ChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------CCCCceEeecCCCChhhHHHH
Q 025715 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (249)
Q Consensus 41 ~g~~vLDLG~gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------~~~~v~~~~gDi~~~~~~~~i 111 (249)
.++++|=.|++. +|....+++.+.. ...+|+.++.++.. ...++.++.+|+++.+....+
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 93 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHR-----------EGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDL 93 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHH-----------TTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----------cCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHH
Confidence 357888888642 4577777665531 24689999988721 124578899999998766555
Q ss_pred HHhcC--CCcccEEEeCCCC
Q 025715 112 IRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 112 ~~~~~--~~~~DlVlsD~~~ 129 (249)
.+.+. -+++|+++.+...
T Consensus 94 ~~~~~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 94 FVELGKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHHHHHCSSCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCcc
Confidence 43321 1479999998754
No 488
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=78.52 E-value=13 Score=30.61 Aligned_cols=114 Identities=11% Similarity=-0.011 Sum_probs=65.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------CCCceEeecCCCChhhHH
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------~~~v~~~~gDi~~~~~~~ 109 (249)
.++++|=.| |+|+....+++.+.. .+.+|+.++.++... -.++.++.+|+++.+...
T Consensus 28 ~~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (283)
T 1g0o_A 28 EGKVALVTG-AGRGIGREMAMELGR-----------RGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIV 95 (283)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHH
Confidence 356677666 467888888776642 246888888875310 124677889999987654
Q ss_pred HHHHhcC--CCcccEEEeCCCCCCCC-CCCcCHHH---HHHH----HHHHHHHHHHhccCCCEEEEE
Q 025715 110 VVIRHFD--GCKADLVVCDGAPDVTG-LHDMDEFV---QSQL----ILAGLTVVTHVLKEGGKFIAK 166 (249)
Q Consensus 110 ~i~~~~~--~~~~DlVlsD~~~~~~g-~~~~~~~~---~~~l----~~~~l~~a~~~Lk~gG~lv~k 166 (249)
.+.+... -+.+|+++.+......+ ..+.+... ..+. ....+..+...++.+|++|..
T Consensus 96 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 96 RMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 4433211 13699999987543221 11112111 1111 123345555666678888864
No 489
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=78.32 E-value=8.6 Score=33.10 Aligned_cols=72 Identities=18% Similarity=-0.001 Sum_probs=49.0
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-------CC--------C-CceEeecCCCChh
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PI--------E-GVIQVQGDITNAR 106 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-------~~--------~-~v~~~~gDi~~~~ 106 (249)
++||=.| |+|....++++.+-. .+..|++++.++.. .+ + ++.++.+|+++.+
T Consensus 29 k~vlVtG-atG~IG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 96 (381)
T 1n7h_A 29 KIALITG-ITGQDGSYLTEFLLG-----------KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDAS 96 (381)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHH
T ss_pred CeEEEEc-CCchHHHHHHHHHHH-----------CCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHH
Confidence 3678777 578888888776641 23689999886532 11 1 6788899999987
Q ss_pred hHHHHHHhcCCCcccEEEeCCCC
Q 025715 107 TAEVVIRHFDGCKADLVVCDGAP 129 (249)
Q Consensus 107 ~~~~i~~~~~~~~~DlVlsD~~~ 129 (249)
....+.+.. .+|.|+...+.
T Consensus 97 ~~~~~~~~~---~~d~Vih~A~~ 116 (381)
T 1n7h_A 97 SLRRWIDVI---KPDEVYNLAAQ 116 (381)
T ss_dssp HHHHHHHHH---CCSEEEECCSC
T ss_pred HHHHHHHhc---CCCEEEECCcc
Confidence 655544322 58999987653
No 490
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=78.23 E-value=32 Score=29.56 Aligned_cols=77 Identities=12% Similarity=0.014 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----------------CCCceEeecCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------------IEGVIQVQGDIT 103 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----------------~~~v~~~~gDi~ 103 (249)
.|+++|=.|++ |++...+++++.. ...+|+.++.++... -.++.++.+|++
T Consensus 44 ~gk~vlVTGas-~GIG~aia~~La~-----------~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~ 111 (346)
T 3kvo_A 44 AGCTVFITGAS-RGIGKAIALKAAK-----------DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR 111 (346)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHT-----------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT
T ss_pred CCCEEEEeCCC-hHHHHHHHHHHHH-----------CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC
Confidence 35677777754 6777777776642 346888888876421 024667889999
Q ss_pred ChhhHHHHHHhcCC--CcccEEEeCCCC
Q 025715 104 NARTAEVVIRHFDG--CKADLVVCDGAP 129 (249)
Q Consensus 104 ~~~~~~~i~~~~~~--~~~DlVlsD~~~ 129 (249)
+.+..+.+.+.+.. +.+|+++.+...
T Consensus 112 d~~~v~~~~~~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 112 DEQQISAAVEKAIKKFGGIDILVNNASA 139 (346)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 98765554433211 379999999753
No 491
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=78.20 E-value=6.3 Score=33.79 Aligned_cols=71 Identities=25% Similarity=0.243 Sum_probs=50.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-----CCCceEeecCCC-ChhhHHHHHHhc
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDIT-NARTAEVVIRHF 115 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-----~~~v~~~~gDi~-~~~~~~~i~~~~ 115 (249)
+++||=.| |+|....++++.+-.. .+.+|++++.++... .++++++.+|++ +.+.+..+.+
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~~----------~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-- 90 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILET----------TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-- 90 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHH----------SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH--
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhC----------CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc--
Confidence 36788766 7899999887766310 135899999886432 258899999999 7765544432
Q ss_pred CCCcccEEEeCCC
Q 025715 116 DGCKADLVVCDGA 128 (249)
Q Consensus 116 ~~~~~DlVlsD~~ 128 (249)
.+|.|+...+
T Consensus 91 ---~~d~Vih~A~ 100 (372)
T 3slg_A 91 ---KCDVILPLVA 100 (372)
T ss_dssp ---HCSEEEECBC
T ss_pred ---cCCEEEEcCc
Confidence 5899998654
No 492
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.16 E-value=9.5 Score=31.33 Aligned_cols=76 Identities=12% Similarity=0.060 Sum_probs=48.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC------CC-------CCceEeecCCCChhhH
Q 025715 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-------EGVIQVQGDITNARTA 108 (249)
Q Consensus 42 g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~------~~-------~~v~~~~gDi~~~~~~ 108 (249)
++++|=.| |+|+....+++.+.. .+.+|+.++.++.. .+ .++.++.+|+++.+..
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (278)
T 1spx_A 6 EKVAIITG-SSNGIGRATAVLFAR-----------EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQ 73 (278)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHH
Confidence 45666666 457888887776642 24689999887521 01 2467788999998765
Q ss_pred HHHHHhcC--CCcccEEEeCCCC
Q 025715 109 EVVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 109 ~~i~~~~~--~~~~DlVlsD~~~ 129 (249)
..+.+... -+.+|+++.+...
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 74 DEILSTTLGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 54433211 1369999998753
No 493
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=78.15 E-value=28 Score=28.77 Aligned_cols=77 Identities=9% Similarity=0.088 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--C---------------CCCceEeecCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---------------IEGVIQVQGDIT 103 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--~---------------~~~v~~~~gDi~ 103 (249)
.++++|=.|++ |++...+++++.. ...+|+.++.++.. . -.++.++++|++
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 75 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAA-----------DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR 75 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHT-----------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC
Confidence 35677777754 6777777776642 34689999988642 0 124677899999
Q ss_pred ChhhHHHHHHhcCC--CcccEEEeCCCC
Q 025715 104 NARTAEVVIRHFDG--CKADLVVCDGAP 129 (249)
Q Consensus 104 ~~~~~~~i~~~~~~--~~~DlVlsD~~~ 129 (249)
+.+..+.+.+.+.. +.+|+++.+...
T Consensus 76 ~~~~v~~~~~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 76 DGDAVAAAVAKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 98765554433211 379999999754
No 494
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=78.11 E-value=27 Score=28.66 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC--------------------------CCCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------------------PIEG 94 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~--------------------------~~~~ 94 (249)
.|+++|=-|++ |++...+++.+.. ...+|+.+|+++.. .-.+
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQ-----------EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRR 77 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----------CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCc
Confidence 35677777765 6677777766542 34689999886310 0124
Q ss_pred ceEeecCCCChhhHHHHHHhcCC--CcccEEEeCCCC
Q 025715 95 VIQVQGDITNARTAEVVIRHFDG--CKADLVVCDGAP 129 (249)
Q Consensus 95 v~~~~gDi~~~~~~~~i~~~~~~--~~~DlVlsD~~~ 129 (249)
+.++..|+++.+..+.+.+.... +.+|+++.+...
T Consensus 78 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 78 IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 67789999998766554432211 479999999754
No 495
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=78.07 E-value=5.8 Score=34.54 Aligned_cols=68 Identities=19% Similarity=0.089 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---CCCCceEeecCCCChhhHHHHHHhcCC
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PIEGVIQVQGDITNARTAEVVIRHFDG 117 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---~~~~v~~~~gDi~~~~~~~~i~~~~~~ 117 (249)
+.++|+=||| |.....+++.+. ....|+..|++... ..+.+..++.|+.+.+.+..+ +.
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~---~~- 76 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLK------------DEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEV---MK- 76 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHT------------TTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHH---HT-
T ss_pred CccEEEEECC--CHHHHHHHHHHh------------cCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHH---Hh-
Confidence 4578999997 889888888875 34678888887532 124556678899987654443 33
Q ss_pred CcccEEEeCC
Q 025715 118 CKADLVVCDG 127 (249)
Q Consensus 118 ~~~DlVlsD~ 127 (249)
.+|+|++-.
T Consensus 77 -~~DvVi~~~ 85 (365)
T 3abi_A 77 -EFELVIGAL 85 (365)
T ss_dssp -TCSEEEECC
T ss_pred -CCCEEEEec
Confidence 589999854
No 496
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=78.03 E-value=4.8 Score=39.23 Aligned_cols=93 Identities=16% Similarity=0.131 Sum_probs=55.1
Q ss_pred ccCCCeEEEEcC--CCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC-C-CCc-eEeecCCCChhhHHHHHH
Q 025715 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-I-EGV-IQVQGDITNARTAEVVIR 113 (249)
Q Consensus 39 ~~~g~~vLDLG~--gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~-~-~~v-~~~~gDi~~~~~~~~i~~ 113 (249)
+++|++||=.|+ |-|.....+++..+ .+|++++.++... + -+. ..+ |..+.+..+.+.+
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~G--------------a~V~~t~~~~k~~~l~lga~~v~--~~~~~~~~~~i~~ 406 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLG--------------AEVYATASEDKWQAVELSREHLA--SSRTCDFEQQFLG 406 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTT--------------CCEEEECCGGGGGGSCSCGGGEE--CSSSSTHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcC--------------CEEEEEeChHHhhhhhcChhhee--ecCChhHHHHHHH
Confidence 478999998884 22333334555554 6888887655211 1 111 112 3334444455655
Q ss_pred hcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhccCCCEEEE
Q 025715 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (249)
Q Consensus 114 ~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk~gG~lv~ 165 (249)
...+..+|+|+--.. + . .+..+.++|++||+++.
T Consensus 407 ~t~g~GvDvVld~~g----g-~-------------~~~~~l~~l~~~Gr~v~ 440 (795)
T 3slk_A 407 ATGGRGVDVVLNSLA----G-E-------------FADASLRMLPRGGRFLE 440 (795)
T ss_dssp HSCSSCCSEEEECCC----T-T-------------TTHHHHTSCTTCEEEEE
T ss_pred HcCCCCeEEEEECCC----c-H-------------HHHHHHHHhcCCCEEEE
Confidence 555668999996321 1 1 24567899999999986
No 497
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=77.92 E-value=9.9 Score=33.01 Aligned_cols=91 Identities=11% Similarity=0.057 Sum_probs=52.6
Q ss_pred cCCCeEEEEcCC--CChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCce-EeecCCCChhhHHHHH
Q 025715 40 EGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVI-QVQGDITNARTAEVVI 112 (249)
Q Consensus 40 ~~g~~vLDLG~g--pG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~-~~~gDi~~~~~~~~i~ 112 (249)
++|.+||=.|++ -|.....+++..+ .+|+++. ++.+. --|.. .+ |..+.+..+.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--------------a~Vi~~~-~~~~~~~~~~lGa~~vi--~~~~~~~~~~v~ 225 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--------------YIPIATC-SPHNFDLAKSRGAEEVF--DYRAPNLAQTIR 225 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--------------CEEEEEE-CGGGHHHHHHTTCSEEE--ETTSTTHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--------------CEEEEEe-CHHHHHHHHHcCCcEEE--ECCCchHHHHHH
Confidence 688999999873 3444445565554 5788874 54321 01221 22 333333444454
Q ss_pred HhcCCCcccEEEeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhc-cCCCEEEE
Q 025715 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVL-KEGGKFIA 165 (249)
Q Consensus 113 ~~~~~~~~DlVlsD~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~L-k~gG~lv~ 165 (249)
+... +.+|+|+-- .|. ...+..+.+.| ++||++++
T Consensus 226 ~~t~-g~~d~v~d~-----~g~------------~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 226 TYTK-NNLRYALDC-----ITN------------VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp HHTT-TCCCEEEES-----SCS------------HHHHHHHHHHSCTTCEEEEE
T ss_pred HHcc-CCccEEEEC-----CCc------------hHHHHHHHHHhhcCCCEEEE
Confidence 4333 459999842 221 02466778888 69999986
No 498
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=77.72 E-value=9.9 Score=29.78 Aligned_cols=68 Identities=13% Similarity=0.019 Sum_probs=47.6
Q ss_pred eEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCCC----CCCceEeecCCCChhhHHHHHHhcCCCc
Q 025715 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDGCK 119 (249)
Q Consensus 44 ~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~~----~~~v~~~~gDi~~~~~~~~i~~~~~~~~ 119 (249)
+||=.| |+|.....+++.+-. .+..|++++.++... -++++++.+|+++.+. +.+ ..
T Consensus 2 kilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-----~~~--~~ 62 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARR-----------RGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-----ADL--DS 62 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-----HHH--TT
T ss_pred EEEEEc-CCCHHHHHHHHHHHH-----------CCCEEEEEEecccccccccCCCceEEecccccccH-----hhc--cc
Confidence 556566 578888888776631 236899999876331 2578899999998765 223 35
Q ss_pred ccEEEeCCCCC
Q 025715 120 ADLVVCDGAPD 130 (249)
Q Consensus 120 ~DlVlsD~~~~ 130 (249)
+|.|++.....
T Consensus 63 ~d~vi~~ag~~ 73 (224)
T 3h2s_A 63 VDAVVDALSVP 73 (224)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCccC
Confidence 89999987543
No 499
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=77.72 E-value=25 Score=29.10 Aligned_cols=69 Identities=14% Similarity=0.026 Sum_probs=46.6
Q ss_pred CeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC-CCCCceEeecCCCChhhHHHHHHhcCCCccc
Q 025715 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-PIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (249)
Q Consensus 43 ~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~-~~~~v~~~~gDi~~~~~~~~i~~~~~~~~~D 121 (249)
++||=.| |+|....++++.+-. .+..|++++.++.. .+++++++.+|++ .+.... .+. .+|
T Consensus 3 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~---~~~--~~d 64 (311)
T 3m2p_A 3 LKIAVTG-GTGFLGQYVVESIKN-----------DGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLIN---QLN--DVD 64 (311)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCCC-----CCEEEECCCC-HHHHHH---HTT--TCS
T ss_pred CEEEEEC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHH---hhc--CCC
Confidence 4666666 578888888776641 23589999988422 2458889999999 665433 333 699
Q ss_pred EEEeCCCC
Q 025715 122 LVVCDGAP 129 (249)
Q Consensus 122 lVlsD~~~ 129 (249)
.|+...+.
T Consensus 65 ~Vih~a~~ 72 (311)
T 3m2p_A 65 AVVHLAAT 72 (311)
T ss_dssp EEEECCCC
T ss_pred EEEEcccc
Confidence 99987654
No 500
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=77.57 E-value=10 Score=31.33 Aligned_cols=77 Identities=10% Similarity=0.027 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHhcCCCCCCCCCCCCCCCeEEEecCCCCC---------CC----CCceEeecCCCChhh
Q 025715 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI----EGVIQVQGDITNART 107 (249)
Q Consensus 41 ~g~~vLDLG~gpG~~s~~l~~~~~~~~~~~~~~~~~~~~~vvavDi~~~~---------~~----~~v~~~~gDi~~~~~ 107 (249)
.++++|=.|+ .|++..++++.+.. ...+|+.+|.++.. .. ..+.++.+|+++.+.
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~ 77 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVA-----------AGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDE 77 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHH
Confidence 3567777775 57777777776542 24689999987532 01 156788999999876
Q ss_pred HHHHHHhcC--CCcccEEEeCCCC
Q 025715 108 AEVVIRHFD--GCKADLVVCDGAP 129 (249)
Q Consensus 108 ~~~i~~~~~--~~~~DlVlsD~~~ 129 (249)
.+.+.+... .+.+|+++.+...
T Consensus 78 v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 78 TARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 555443321 1479999998753
Done!