Your job contains 1 sequence.
>025719
MAEREENPAEPPMEKVSEKIHDHDSSSSSSSDSDNEEPAAQSSVKADIYRLFGRERPVHQ
VFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTLILALAILFLWAN
AHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALW
VLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVLS
KIPVKAKRV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025719
(249 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 781 1.3e-77 1
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 762 1.3e-75 1
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 728 5.3e-72 1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 716 9.9e-71 1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 465 3.9e-44 1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 425 6.8e-40 1
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 306 2.8e-27 1
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 250 1.5e-26 2
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 283 7.6e-25 1
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 169 9.1e-13 1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 145 5.6e-09 1
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913... 140 7.5e-08 1
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_... 140 7.5e-08 1
UNIPROTKB|A8MT72 - symbol:RTN1 "Reticulon-1" species:9606... 133 9.4e-08 1
UNIPROTKB|Q1LZ76 - symbol:RTN1 "Uncharacterized protein" ... 133 2.1e-07 1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ... 135 2.4e-07 1
UNIPROTKB|Q5MY90 - symbol:rtn1-b "Reticulon-1-B" species:... 143 2.7e-07 1
UNIPROTKB|Q7YRW9 - symbol:RTN4 "Uncharacterized protein" ... 130 3.9e-07 1
UNIPROTKB|Q6IM70 - symbol:RTN4 "RTN4-C" species:9823 "Sus... 130 3.9e-07 1
UNIPROTKB|F1NH22 - symbol:RTN1 "Uncharacterized protein" ... 131 4.1e-07 1
UNIPROTKB|I3LBH0 - symbol:RTN1 "Uncharacterized protein" ... 131 4.1e-07 1
ZFIN|ZDB-GENE-030710-3 - symbol:rtn1b "reticulon 1b" spec... 141 4.8e-07 1
UNIPROTKB|F1PNX5 - symbol:RTN1 "Uncharacterized protein" ... 130 5.5e-07 1
UNIPROTKB|J9P9U4 - symbol:J9P9U4 "Uncharacterized protein... 134 6.8e-07 1
UNIPROTKB|Q6IFY7 - symbol:rtn1-a "Reticulon-1-A" species:... 129 7.6e-07 1
UNIPROTKB|F1NCK0 - symbol:Gga.4205 "Uncharacterized prote... 127 1.0e-06 1
ZFIN|ZDB-GENE-030710-5 - symbol:rtn3 "reticulon 3" specie... 130 1.0e-06 1
RGD|620986 - symbol:Rtn1 "reticulon 1" species:10116 "Rat... 137 1.5e-06 1
UNIPROTKB|E1BP30 - symbol:E1BP30 "Uncharacterized protein... 136 1.8e-06 1
UNIPROTKB|F1PVP5 - symbol:F1PVP5 "Uncharacterized protein... 137 2.2e-06 1
UNIPROTKB|Q1RMR8 - symbol:RTN4 "RTN4 protein" species:991... 131 2.7e-06 1
ZFIN|ZDB-GENE-030131-2426 - symbol:rtn1a "reticulon 1a" s... 135 2.9e-06 1
UNIPROTKB|F8W914 - symbol:RTN4 "Reticulon-4" species:9606... 130 3.0e-06 1
UNIPROTKB|E1BUW7 - symbol:Gga.4205 "Uncharacterized prote... 130 3.0e-06 1
UNIPROTKB|F1NH23 - symbol:RTN1 "Uncharacterized protein" ... 134 3.5e-06 1
UNIPROTKB|I3L6J1 - symbol:RTN1 "Uncharacterized protein" ... 134 3.5e-06 1
UNIPROTKB|Q16799 - symbol:RTN1 "Reticulon-1" species:9606... 134 3.6e-06 1
MGI|MGI:1933947 - symbol:Rtn1 "reticulon 1" species:10090... 134 3.6e-06 1
UNIPROTKB|H7C106 - symbol:RTN4 "Reticulon-4" species:9606... 123 4.3e-06 1
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote... 128 4.7e-06 1
UNIPROTKB|F5H774 - symbol:RTN3 "Reticulon-3" species:9606... 133 5.8e-06 1
UNIPROTKB|O95197 - symbol:RTN3 "Reticulon-3" species:9606... 133 6.7e-06 1
UNIPROTKB|F1Q231 - symbol:RTN1 "Uncharacterized protein" ... 130 9.4e-06 1
WB|WBGene00004336 - symbol:ret-1 species:6239 "Caenorhabd... 136 1.1e-05 1
ZFIN|ZDB-GENE-030710-2 - symbol:rtn4b "reticulon 4b" spec... 133 1.1e-05 2
UNIPROTKB|F1P5B2 - symbol:Gga.4205 "Uncharacterized prote... 125 1.2e-05 1
RGD|620988 - symbol:Rtn3 "reticulon 3" species:10116 "Rat... 130 1.2e-05 2
MGI|MGI:1339970 - symbol:Rtn3 "reticulon 3" species:10090... 130 1.4e-05 1
UNIPROTKB|A7MC64 - symbol:rtn1 "Reticulon-1" species:8364... 127 2.4e-05 1
MGI|MGI:1915835 - symbol:Rtn4 "reticulon 4" species:10090... 128 3.0e-05 1
UNIPROTKB|D4AEM9 - symbol:Rtn4 "Reticulon-4" species:1011... 127 3.5e-05 1
UNIPROTKB|F1Q2B3 - symbol:RTN1 "Uncharacterized protein" ... 125 3.8e-05 1
RGD|620989 - symbol:Rtn4 "reticulon 4" species:10116 "Rat... 127 4.0e-05 1
UNIPROTKB|F1LQN3 - symbol:Rtn4 "Reticulon-4" species:1011... 127 4.0e-05 1
UNIPROTKB|F1NNJ7 - symbol:Gga.4205 "Uncharacterized prote... 124 4.4e-05 1
UNIPROTKB|E2R925 - symbol:RTN4 "Uncharacterized protein" ... 126 5.4e-05 1
UNIPROTKB|J9P0R7 - symbol:RTN4 "Uncharacterized protein" ... 126 5.5e-05 1
UNIPROTKB|F8WAM4 - symbol:RTN4 "Reticulon-4" species:9606... 127 7.8e-05 2
UNIPROTKB|F1NCP4 - symbol:Gga.4205 "Uncharacterized prote... 124 9.2e-05 1
UNIPROTKB|G3X7U3 - symbol:LOC100847649 "Uncharacterized p... 97 0.00011 1
UNIPROTKB|Q9NQC3 - symbol:RTN4 "Reticulon-4" species:9606... 127 0.00013 2
UNIPROTKB|F1N405 - symbol:RTN4 "Uncharacterized protein" ... 127 0.00013 2
CGD|CAL0001315 - symbol:orf19.3799 species:5476 "Candida ... 111 0.00061 1
UNIPROTKB|Q5A691 - symbol:RTN1 "Potential conserved endop... 111 0.00061 1
ZFIN|ZDB-GENE-030710-1 - symbol:rtn4a "reticulon 4a" spec... 109 0.00083 1
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 156/253 (61%), Positives = 183/253 (72%)
Query: 1 MAEREEN--PAEPP-MEKVSEKIXXXXXXXXXXXXXXNEEPAAQSSVKADIYRLFGRERP 57
MAE E P E MEK+SEKI E+P + S+VKA IYR+FGRE+P
Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEY--EKPDSPSAVKAKIYRMFGREKP 58
Query: 58 VHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX 117
VH+V GGGKPADVFLWR+KK+S VLG ATAIWVLFEL EYHLL+L+CH
Sbjct: 59 VHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFL 118
Query: 118 WANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIA 177
W+NAHT I K P IPE+H+PEE FL VAS+ R ELN AF +LRSIA GRDLK FLM +
Sbjct: 119 WSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVV 178
Query: 178 ALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAK 237
LW++SVVG+W NFLTL YI V+LH VP+LYEK+EDK+DPLAEKAM E++KQY VFD K
Sbjct: 179 GLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEK 238
Query: 238 VLSKIPV---KAK 247
VLSKIP+ KAK
Sbjct: 239 VLSKIPIASLKAK 251
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 148/243 (60%), Positives = 179/243 (73%)
Query: 10 EPPMEKVSEKIXXXXXXXXXXXXXXNEE-------PAA-QSSVKADIYRLFGRERPVHQV 61
E M+K+SEKI +E+ P++ SS+K+ +YRLFGRE+PVH+V
Sbjct: 24 ESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKV 83
Query: 62 FGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANA 121
GGGKPAD+F+W+NKK+S GVLGGATA WV+FEL EYHLLTL+CH W+NA
Sbjct: 84 LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143
Query: 122 HTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWV 181
FI K+PP IPEVH+PEEP LQ+AS RIE+N F+ LR IASGRDLK FL+AIA LWV
Sbjct: 144 TMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWV 203
Query: 182 LSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVLSK 241
LS++G NFLTL YIALVLL VP+ Y+KYEDK+DPL EKAMIE+KKQYAV D KVLSK
Sbjct: 204 LSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSK 263
Query: 242 IPV 244
IP+
Sbjct: 264 IPL 266
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 142/238 (59%), Positives = 170/238 (71%)
Query: 10 EPPMEKVSEKIXXXXXXXXXXXXXX-NEEPAAQSS---VKADIYRLFGRERPVHQVFGGG 65
E MEK+SEKI NE+ ++ SS +K+ +YRLFGRERPVH+V GGG
Sbjct: 24 ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFI 125
KPAD+F+W++KK+S GV GGAT WVLFEL EYHLLTL+CH W+NA FI
Sbjct: 84 KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143
Query: 126 KKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVV 185
K+PP IPEVH+PEEP LQ+AS RIE+N + LR IASGRD+K FL AIA LWVLS++
Sbjct: 144 HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSIL 203
Query: 186 GSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVLSKIP 243
G +FLTL YIALVLL VP+ Y+KYEDK+D EKAM E+KKQYAV DAKV SKIP
Sbjct: 204 GGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIP 261
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 138/241 (57%), Positives = 168/241 (69%)
Query: 10 EPPMEKVSEKIXXXXXXXXXXXXXXNEEP--AAQSSVKADIYRLFGRERPVHQVFGGGKP 67
E +EK+ EKI +++ ++ SS K+ IYRLFGRE+PVH+V GGGKP
Sbjct: 9 ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKP 68
Query: 68 ADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKK 127
AD+FLWRNKK+S GVLG TA WVLFELFEYHLL +CH W+NA TFI K
Sbjct: 69 ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHK 128
Query: 128 APPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGS 187
+ P IPEVH+PE+P LQ+ S RIE+N +LR+IASG+D+K F++ IA LWVLS++GS
Sbjct: 129 STPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGS 188
Query: 188 WCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVLSKIPVKAK 247
NFLTLFY A VLL +PVLYEKYEDK+D EKAM EIKKQYAV D KVL K+ K
Sbjct: 189 CYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIP 248
Query: 248 R 248
R
Sbjct: 249 R 249
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 111/265 (41%), Positives = 150/265 (56%)
Query: 3 EREENPAEPPMEKVSEKIXXXXXXXXXXXXXXNEEPAAQSSVKADIYRLFGRERPVHQVF 62
E+ + E MEK+++KI +E+P + S++KA IYRLFGRE+PVH+V
Sbjct: 6 EKSMHKEESLMEKIADKIHDHDSSSSSDSE--HEKPESPSALKAKIYRLFGREKPVHKVL 63
Query: 63 GGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAH 122
GGG PADVFLWR+KK+SA VLG ATAIWVLFEL EYH L+LVCH +NAH
Sbjct: 64 GGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAH 123
Query: 123 TFI-------------KKAPP--CIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGR 167
F+ K+A P C + H + +++ F+++ +
Sbjct: 124 AFMNKGTFPYDCFCTEKRAEPGLCYFKEHCLRKGLEEISHELIQSTYETFSIMGFVTR-- 181
Query: 168 DLKSFLMAIAA-LWVLSVVGSWCNFLT-LFYIALVLLHIVPVLYEKYEDKIDPLAEKAMI 225
S + I+ W + +G C L L V+LH VP+LYEK+EDK+DP+AEK +
Sbjct: 182 --TSIYIGISGGFWAVDNLG--CGKLVQLLDSCFVVLHTVPMLYEKHEDKVDPVAEKTLK 237
Query: 226 EIKKQYAVFDAKVLSKIPV---KAK 247
E+KK Y VFD KVLSK+PV KAK
Sbjct: 238 ELKKHYMVFDEKVLSKLPVASLKAK 262
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 81/202 (40%), Positives = 119/202 (58%)
Query: 50 RLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXX 109
+LF R+R +H +FGGGK AD+ LWR KI+A ++ G + +W L E+ EY+ +TL+CH
Sbjct: 22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASM 81
Query: 110 XXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDL 169
W+ A F+ P IPEV L E F Q+A +F + N L +A GRD
Sbjct: 82 TSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDP 141
Query: 170 KSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKK 229
F + +L+++S++G++ NF+ L +I V + +PV+YE YED +D A K M ++KK
Sbjct: 142 PLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKK 201
Query: 230 QYAVFDAKVLSKIP---VKAKR 248
Y D VLSKIP VK K+
Sbjct: 202 LYKKVDTNVLSKIPRGTVKNKK 223
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 65/191 (34%), Positives = 94/191 (49%)
Query: 55 ERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXX 114
E VHQ G AD+ +W+N++ +LG T +W LFE Y V +T
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 115 XXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLM 174
WA + + P +P + + EE VA A R+ +N AV R I GR+ K
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 175 AIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVF 234
LW +S VG++ NFLT+ Y+ +VL ++P LYE+Y+D ID I+ QY
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKI 181
Query: 235 DAKVLSKIPVK 245
D ++L KI K
Sbjct: 182 DERLLQKIIAK 192
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 250 (93.1 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 52/176 (29%), Positives = 84/176 (47%)
Query: 68 ADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKK 127
AD+ LWR + +S GV+ +T W++FE L++ A F +
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 128 APPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFL-MAIAALWVLSVVG 186
+PE+ L EE A++FRI+LNH + + G D + F + LW+LS +G
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 187 SWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVLSKI 242
S+ + TL YI +L +P LY KY+ K+D + Y + D V+S++
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRL 239
Score = 64 (27.6 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 49 YRLFGRERPVHQVFGGGK 66
YRL GR+ VHQ GGGK
Sbjct: 23 YRLLGRQITVHQFMGGGK 40
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 54/167 (32%), Positives = 91/167 (54%)
Query: 50 RLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXX 109
+LF R+R +H++ GGG ADV LWR K +S G++ A W++FE F Y + TL+
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 110 XXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDL 169
W+ + + + + P +PE + E + + RI +N V IA RD
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 170 KSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKI 216
+ + +L++LS++GS +F TL + +++++ VP YE+YED I
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 39/171 (22%), Positives = 76/171 (44%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKA 128
D++LWR KK++ L +T+ W+L + + +T+V W + + K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 129 PPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSW 188
P + + + EE ++ + R+ + + + + + F + W+LS +G+
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 189 CNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVL 239
+F T +I LV+ VP L+E+Y D+I + K Y K+L
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKIL 188
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 145 (56.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 37/138 (26%), Positives = 65/138 (47%)
Query: 68 ADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKK 127
AD+ LWRN+ + +L +T W LFE Y+LL+ V + WA + T + +
Sbjct: 7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66
Query: 128 APPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRD-LKSFLMAIAALWVLSVVG 186
P +P + +PEE + A R+ +N+ ++ I R+ ++ + LW
Sbjct: 67 PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTIC-- 124
Query: 187 SWCNFLTLFYIALVLLHI 204
C FL L ++ + +HI
Sbjct: 125 --CIFLFL-HVMYLTVHI 139
Score = 107 (42.7 bits), Expect = 0.00058, P = 0.00058
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 171 SFLMAIA----ALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKID 217
SF+ A+ LW +S VG+ N LTL YI ++L P++YEKY+D ID
Sbjct: 140 SFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 190
>UNIPROTKB|Q08D83 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
Length = 256
Score = 140 (54.3 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 49/213 (23%), Positives = 98/213 (46%)
Query: 46 ADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVC 105
AD + +PV +F + D+ WR+ K G + G T I +L L + ++++V
Sbjct: 48 ADSFVSSSSSQPV-SLFSTSQVHDLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVS 104
Query: 106 HTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNH 155
+ + + ++K+ P ++ L E F +A + +N
Sbjct: 105 YLILALLSVTISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINR 164
Query: 156 AFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDK 215
A ++ + DL L +W+++ VG+ N +TL +A +L+ +P++YEKY+ +
Sbjct: 165 ALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQ 224
Query: 216 IDPLAEKAMIEIKKQYAVFDAKVLSKIPVKAKR 248
ID A + K ++ + K+ +K+P AK+
Sbjct: 225 IDHYVGIARDQTK---SIVE-KIQAKLPGIAKK 253
>UNIPROTKB|D4A1U2 [details] [associations]
symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
Uniprot:D4A1U2
Length = 256
Score = 140 (54.3 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 50/213 (23%), Positives = 98/213 (46%)
Query: 46 ADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVC 105
AD + +PV +F + D+ WR+ K G + G T I +L L + ++++V
Sbjct: 48 ADSFVSSSSSQPV-SIFSTSQVHDLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVS 104
Query: 106 HTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNH 155
+ + + ++K+ P ++ L E F +A + +N
Sbjct: 105 YLILALLSVTISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNK 164
Query: 156 AFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDK 215
A ++ + DL L +W+++ VG+ N +TL +A +L+ VP++YEKY+ +
Sbjct: 165 ALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQ 224
Query: 216 IDPLAEKAMIEIKKQYAVFDAKVLSKIPVKAKR 248
ID A + K ++ + K+ +K+P AK+
Sbjct: 225 IDHYVGIARDQTK---SIVE-KIQAKLPGIAKK 253
>UNIPROTKB|A8MT72 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 HGNC:HGNC:10467 ChiTaRS:RTN1
HOGENOM:HOG000015254 EMBL:AL121694 EMBL:AL133299 EMBL:AL139194
IPI:IPI00794113 ProteinModelPortal:A8MT72 SMR:A8MT72 STRING:A8MT72
PRIDE:A8MT72 Ensembl:ENST00000395090 UCSC:uc010apl.2
ArrayExpress:A8MT72 Bgee:A8MT72 Uniprot:A8MT72
Length = 193
Score = 133 (51.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 50/193 (25%), Positives = 89/193 (46%)
Query: 67 PA-DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
PA D+ WR+ K G++ G+ + +LF L ++ ++++V + + +
Sbjct: 5 PAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 62
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
++K P E+ L +E + + +N LR + +DL L
Sbjct: 63 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 122
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID I AV
Sbjct: 123 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV- 178
Query: 236 AKVLSKIPVKAKR 248
AK+ +KIP AKR
Sbjct: 179 AKIQAKIP-GAKR 190
>UNIPROTKB|Q1LZ76 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:DAAA02029288
EMBL:DAAA02029289 EMBL:BC116162 IPI:IPI00904153 UniGene:Bt.22982
SMR:Q1LZ76 STRING:Q1LZ76 Ensembl:ENSBTAT00000015218
NextBio:20875732 Uniprot:Q1LZ76
Length = 208
Score = 133 (51.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/190 (25%), Positives = 88/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V + + + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K P E+ L +E + + +N+ LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID I AV AK+
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV-AKI 196
Query: 239 LSKIPVKAKR 248
+KIP AKR
Sbjct: 197 QAKIP-GAKR 205
>UNIPROTKB|F1RPY3 [details] [associations]
symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
Length = 236
Score = 135 (52.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 46/190 (24%), Positives = 89/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G + G T I +L L + ++++V + + + +
Sbjct: 50 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 107
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P ++ L E F +A + +N A ++ + DL L
Sbjct: 108 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAVF 167
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+++ VG+ N +TL +A +L+ VPV+YEKY+ +ID A + K ++ + K+
Sbjct: 168 MWLMTYVGAVFNGITLLILAELLIFSVPVVYEKYKTQIDHYVGIARDQTK---SIVE-KI 223
Query: 239 LSKIPVKAKR 248
+K+P AK+
Sbjct: 224 QAKVPGIAKK 233
>UNIPROTKB|Q5MY90 [details] [associations]
symbol:rtn1-b "Reticulon-1-B" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY484582
EMBL:AF498369 EMBL:BC084108 EMBL:CD326067 EMBL:BK004058
RefSeq:NP_001089011.1 UniGene:Xl.8555 ProteinModelPortal:Q5MY90
SMR:Q5MY90 GeneID:496397 KEGG:xla:496397 CTD:496397
Xenbase:XB-GENE-1011340 HOVERGEN:HBG008971 Uniprot:Q5MY90
Length = 752
Score = 143 (55.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 53/218 (24%), Positives = 98/218 (44%)
Query: 36 EEPAAQSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFEL 95
E PA QS V + + G +P+ F K D+ WR+ K G++ G+ + +LF L
Sbjct: 539 EGPAYQSKV-IGMTSILG-PKPL--TFFKKKAIDLLYWRDVK-QTGIVFGSILL-MLFSL 592
Query: 96 FEYHLLTLVCHTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHLPEEPFLQV 145
+ +++++ + + + ++K P E+ L +E +
Sbjct: 593 TLFSVVSVIAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKSYLDIEISLSQEQIQKY 652
Query: 146 ASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIV 205
F++ N LR + +DL L +W+L+ VG+ N LTL +A+V + +
Sbjct: 653 TGCFQLYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSL 712
Query: 206 PVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVLSKIP 243
PV+Y+KY+ +ID ++ V K+ +KIP
Sbjct: 713 PVVYDKYQAQIDQYL--GLVRTNMNIIV--TKIQAKIP 746
>UNIPROTKB|Q7YRW9 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
UniGene:Bt.105155 GeneID:359718 KEGG:bta:359718 NextBio:20812748
EMBL:BC116111 EMBL:AY164744 IPI:IPI00718559 RefSeq:NP_001068606.1
SMR:Q7YRW9 STRING:Q7YRW9 Ensembl:ENSBTAT00000014744 Uniprot:Q7YRW9
Length = 199
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
K D+ WR+ K GV+ GA+ +++L L + ++++ + +
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
I+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 128
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID A +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 188
Query: 236 AKV 238
AK+
Sbjct: 189 AKI 191
>UNIPROTKB|Q6IM70 [details] [associations]
symbol:RTN4 "RTN4-C" species:9823 "Sus scrofa" [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 eggNOG:NOG306139 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 OMA:NWKCQAI EMBL:CU929931
EMBL:CU928339 EMBL:BK001795 RefSeq:NP_001123435.1 UniGene:Ssc.94392
SMR:Q6IM70 STRING:Q6IM70 Ensembl:ENSSSCT00000009205
GeneID:100170118 KEGG:ssc:100170118 Uniprot:Q6IM70
Length = 199
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
K D+ WR+ K GV+ GA+ +++L L + ++++ + +
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
I+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 128
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID A +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 188
Query: 236 AKV 238
AK+
Sbjct: 189 AKI 191
>UNIPROTKB|F1NH22 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02003912
EMBL:AADN02003911 IPI:IPI00583109 Ensembl:ENSGALT00000019594
ArrayExpress:F1NH22 Uniprot:F1NH22
Length = 208
Score = 131 (51.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 45/190 (23%), Positives = 90/190 (47%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
++ WR+ K G++ G+ + +LF L ++ ++++V + + + +
Sbjct: 23 NLLYWRDIK-QTGIVFGSLLL-LLFSLTQFSVVSVVAYLALAGLSATISFRIYKSVLQAV 80
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K P E++L ++ + ++ +N LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLDMEMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+L+ VG+ N LTL +A+V + +PV+Y+KY+ +ID ++ V AK+
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQYL--GLVRTHINTVV--AKI 196
Query: 239 LSKIPVKAKR 248
+KIP AKR
Sbjct: 197 QAKIP-GAKR 205
>UNIPROTKB|I3LBH0 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 CTD:6252 GeneTree:ENSGT00390000009934
EMBL:CU469078 EMBL:FP340567 UniGene:Ssc.13916 GeneID:100152394
KEGG:ssc:100152394 RefSeq:NP_001231570.1 RefSeq:XP_003480527.1
ProteinModelPortal:I3LBH0 SMR:I3LBH0 Ensembl:ENSSSCT00000032115
Uniprot:I3LBH0
Length = 208
Score = 131 (51.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 48/190 (25%), Positives = 87/190 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V + + + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K P E+ L +E + + +N LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID I AV AK+
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV-AKI 196
Query: 239 LSKIPVKAKR 248
+KIP AKR
Sbjct: 197 QAKIP-GAKR 205
>ZFIN|ZDB-GENE-030710-3 [details] [associations]
symbol:rtn1b "reticulon 1b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-3 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG008971 HOGENOM:HOG000134444 EMBL:AY555034
IPI:IPI00650731 UniGene:Dr.673 ProteinModelPortal:Q4G5W7 SMR:Q4G5W7
PRIDE:Q4G5W7 InParanoid:Q4G5W7 ArrayExpress:Q4G5W7 Bgee:Q4G5W7
Uniprot:Q4G5W7
Length = 767
Score = 141 (54.7 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 48/196 (24%), Positives = 87/196 (44%)
Query: 58 VHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX 117
V Q F K ++ WR+ K S V G + + +LF L ++ ++++V +
Sbjct: 571 VFQGFSREKAMELLYWRDLKKSGLVFG--SLLLMLFSLTQFSVVSVVAYLALASLSATIS 628
Query: 118 ---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGR 167
+ + ++K P E+ L + + A + +N LR + +
Sbjct: 629 FRVYKSVLQAVQKTDEGHPFKVYLDVEMSLSHDQMQKYAENVQYYINSTLKELRRLFLVQ 688
Query: 168 DLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEI 227
DL L +W+L+ VG+ N LTL + +V + +PV+YEKY+ +ID + I
Sbjct: 689 DLVDSLKFAVLMWLLTYVGALFNGLTLLIMVVVCMFSMPVVYEKYQAQIDQYVDL----I 744
Query: 228 KKQYAVFDAKVLSKIP 243
+ Q AK+ K+P
Sbjct: 745 RTQVNSVVAKIQEKVP 760
>UNIPROTKB|F1PNX5 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:DPKKSGI
EMBL:AAEX03005762 Ensembl:ENSCAFT00000024693 Uniprot:F1PNX5
Length = 208
Score = 130 (50.8 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V + + + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K P E+ L +E + + +N+ LR + +DL L
Sbjct: 81 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID ++ V AK+
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYL--GLVRTHINTVV--AKI 196
Query: 239 LSKIPVKAKR 248
+KIP AKR
Sbjct: 197 QAKIP-GAKR 205
>UNIPROTKB|J9P9U4 [details] [associations]
symbol:J9P9U4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:IICPYNI
EMBL:AAEX03011658 EMBL:AAEX03011657 Ensembl:ENSCAFT00000043047
Uniprot:J9P9U4
Length = 296
Score = 134 (52.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G + G T I +L L + ++++V + + + +
Sbjct: 110 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 167
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P ++ L E F +A + +N A ++ + DL L
Sbjct: 168 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 227
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+++ VG+ N +TL +A +L+ VP++YEKY+ +ID A + K ++ + K+
Sbjct: 228 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 283
Query: 239 LSKIPVKAKR 248
+K+P AK+
Sbjct: 284 QAKLPGIAKK 293
>UNIPROTKB|Q6IFY7 [details] [associations]
symbol:rtn1-a "Reticulon-1-A" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY182251
EMBL:CD360654 EMBL:BK004007 RefSeq:NP_001089006.1 UniGene:Xl.24060
ProteinModelPortal:Q6IFY7 SMR:Q6IFY7 GeneID:496390 KEGG:xla:496390
CTD:496390 Xenbase:XB-GENE-6252069 HOVERGEN:HBG000838
Uniprot:Q6IFY7
Length = 207
Score = 129 (50.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 37/159 (23%), Positives = 75/159 (47%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G++ G+ + +LF L ++ +++++ + + + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSVLL-MLFSLIQFSVVSVMAYLALAALSATISFRIYKSVLQAV 80
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K P E+ L +E + ++ N LR + +DL L
Sbjct: 81 QKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKID 217
+W+L+ VG+ N LTL +A+V + +PV+Y+KY+ +ID
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQID 179
>UNIPROTKB|F1NCK0 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00820463 Ensembl:ENSGALT00000013195 ArrayExpress:F1NCK0
Uniprot:F1NCK0
Length = 199
Score = 127 (49.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
K D+ WR+ K GV+ GA+ +++L L + ++++ + +
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
I+K+ P +V + EE + +S +N LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKF 128
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQ 188
Query: 236 AKV 238
AK+
Sbjct: 189 AKI 191
>ZFIN|ZDB-GENE-030710-5 [details] [associations]
symbol:rtn3 "reticulon 3" species:7955 "Danio rerio"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-5 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 eggNOG:NOG303514 OrthoDB:EOG4229M0
EMBL:CT030012 EMBL:CU457795 EMBL:AY555038 IPI:IPI00774300
RefSeq:XP_003198973.1 UniGene:Dr.130204 SMR:Q4G5W3
Ensembl:ENSDART00000041088 Ensembl:ENSDART00000124244
GeneID:100538268 KEGG:dre:100538268 InParanoid:Q4G5W3
Uniprot:Q4G5W3
Length = 236
Score = 130 (50.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 53/192 (27%), Positives = 84/192 (43%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVL-------FELFEYHLLTLVCHTXXXXXXXXXXWA-- 119
D+ WR+ K S GV+ G + + +L + Y LL+L+C T A
Sbjct: 49 DLVHWRDPKKS-GVVFGVSLLLLLSLAAFSVISVVSYLLLSLLCVTISFRIYKSVIQAVQ 107
Query: 120 ---NAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAI 176
H F KA +V +P E F + +N A + + DL L
Sbjct: 108 KSNEGHPF--KAL-MDKDVTVPPETFRKHVDGCLSHVNRALKQMSRLFLVEDLVDSLKLA 164
Query: 177 AALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDA 236
+W+L+ VG+ N +T+ +A +LL VP +YEK + +ID + A + Q+ A
Sbjct: 165 VVMWLLTYVGAVFNGITILILADILLFSVPPIYEKNKTQIDHYIDIA----RTQFNTTVA 220
Query: 237 KVLSKIPVKAKR 248
K+ K+P KR
Sbjct: 221 KLQEKLPGAMKR 232
>RGD|620986 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=ISO] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 RGD:620986 GO:GO:0016021 GO:GO:0030182
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252
eggNOG:NOG306139 OrthoDB:EOG437RDX GeneTree:ENSGT00390000009934
EMBL:U17604 EMBL:U17603 IPI:IPI00213559 IPI:IPI00231126
RefSeq:NP_446317.1 UniGene:Rn.55126 ProteinModelPortal:Q64548
SMR:Q64548 STRING:Q64548 PRIDE:Q64548 Ensembl:ENSRNOT00000006373
GeneID:116644 KEGG:rno:116644 UCSC:RGD:620986 HOGENOM:HOG000015254
NextBio:619379 Genevestigator:Q64548 Uniprot:Q64548
Length = 777
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/221 (23%), Positives = 99/221 (44%)
Query: 39 AAQSSVKADIYRLFGRER-PVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFE 97
++QS +I G + P F K D+ WR+ K G++ G+ + +LF L +
Sbjct: 561 SSQSPAATEIPGPLGSDLVPPLPFFNKQKAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQ 618
Query: 98 YHLLTLVCHTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVAS 147
+ ++++V + + + ++K P E+ L +E +
Sbjct: 619 FSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTD 678
Query: 148 AFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPV 207
++ +N LR + +DL L +W+L+ VG+ N LTL +A+V + +PV
Sbjct: 679 CLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPV 738
Query: 208 LYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVLSKIPVKAKR 248
+Y K++ ++D ++ V AK+ +KIP AKR
Sbjct: 739 VYVKHQAQVDQYL--GLVRTHINTVV--AKIQAKIP-GAKR 774
>UNIPROTKB|E1BP30 [details] [associations]
symbol:E1BP30 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:DAAA02029288 EMBL:DAAA02029289
IPI:IPI00924046 Ensembl:ENSBTAT00000061568 ArrayExpress:E1BP30
Uniprot:E1BP30
Length = 697
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
K D+ WR+ K G++ G+ + +LF L ++ ++++V + + +
Sbjct: 509 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 566
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
++K P E+ L +E + + +N+ LR + +DL L
Sbjct: 567 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKF 626
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID I AV
Sbjct: 627 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV- 682
Query: 236 AKVLSKIPVKAKR 248
AK+ +KIP AKR
Sbjct: 683 AKIQAKIP-GAKR 694
>UNIPROTKB|F1PVP5 [details] [associations]
symbol:F1PVP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03011658
EMBL:AAEX03011657 Ensembl:ENSCAFT00000023909 Uniprot:F1PVP5
Length = 1042
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 51/192 (26%), Positives = 89/192 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVL----FELFE---YHLLTLVCHTXXXXXXXXXXWA-- 119
D+ WR+ K G + G T I +L F + Y +L L+ T A
Sbjct: 855 DLIFWRDVK-KTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAVQ 913
Query: 120 ---NAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAI 176
H F K+A + ++ L E F +A + +N A ++ + DL L
Sbjct: 914 KSEEGHPF-KRAYLDV-DITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLA 971
Query: 177 AALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDA 236
+W+++ VG+ N +TL +A +L+ VP++YEKY+ +ID A + K ++ +
Sbjct: 972 VFMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE- 1027
Query: 237 KVLSKIPVKAKR 248
K+ +K+P AK+
Sbjct: 1028 KIQAKLPGIAKK 1039
>UNIPROTKB|Q1RMR8 [details] [associations]
symbol:RTN4 "RTN4 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
EMBL:BC114748 IPI:IPI00730691 RefSeq:NP_001106692.1
UniGene:Bt.105155 SMR:Q1RMR8 STRING:Q1RMR8
Ensembl:ENSBTAT00000036144 GeneID:359718 KEGG:bta:359718
NextBio:20812748 Uniprot:Q1RMR8
Length = 379
Score = 131 (51.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 53/212 (25%), Positives = 90/212 (42%)
Query: 37 EPAAQSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELF 96
EP+ S V A P + G D+ WR+ K GV+ GA+ +++L L
Sbjct: 162 EPSWTSVVPAPAAPPSTPAAPKRRGSSGSVVVDLLYWRDIK-KTGVVFGAS-LFLLLSLT 219
Query: 97 EYHLLTLVCHTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVA 146
+ ++++ + + I+K+ P EV + EE + +
Sbjct: 220 VFSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYS 279
Query: 147 SAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVP 206
++ +N LR + DL L +WV + VG+ N LTL +AL+ L VP
Sbjct: 280 NSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVP 339
Query: 207 VLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
V+YE+++ +ID A +K A AK+
Sbjct: 340 VIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 371
>ZFIN|ZDB-GENE-030131-2426 [details] [associations]
symbol:rtn1a "reticulon 1a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-030131-2426 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG008971 GeneTree:ENSGT00390000009934
EMBL:BX072537 EMBL:AY555044 IPI:IPI00613432 RefSeq:NP_001025138.2
UniGene:Dr.77106 SMR:Q4G5V7 Ensembl:ENSDART00000076574
GeneID:323706 KEGG:dre:323706 CTD:323706 InParanoid:Q4G5V7
OMA:ISHGEER NextBio:20808397 Uniprot:Q4G5V7
Length = 818
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 49/199 (24%), Positives = 91/199 (45%)
Query: 62 FGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANA 121
F K D+ WR+ K S V G + + +LF L ++ +++++ + +
Sbjct: 627 FSRQKVVDLVHWRDLKQSGLVFG--SVLLLLFSLTQFSVVSVIAYLALAVLSATISF-RV 683
Query: 122 HTFIKKAPPCIPEVHLPEEPFLQVA---SAFRIE---------LNHAFAVLRSIASGRDL 169
+ + +A E H P + +L+V SA +I +N LR + +DL
Sbjct: 684 YKSVLQAVQKTDEGH-PFKSYLEVEISLSADQISKYVDKTQLYINTTMKELRRLFLVQDL 742
Query: 170 KSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKK 229
+ +W+L+ VG+ N LTL +A++ + VPV+YEKY+ +ID ++
Sbjct: 743 VDSIKFAVLMWLLTYVGALFNGLTLLILAVISMFSVPVVYEKYQTQIDQYLGLVRTQVN- 801
Query: 230 QYAVFDAKVLSKIPVKAKR 248
+V K+ K+P K+
Sbjct: 802 --SVM-GKIREKVPGAKKK 817
>UNIPROTKB|F8W914 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01011809
ProteinModelPortal:F8W914 SMR:F8W914 Ensembl:ENST00000402434
ArrayExpress:F8W914 Bgee:F8W914 Uniprot:F8W914
Length = 345
Score = 130 (50.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 48/192 (25%), Positives = 84/192 (43%)
Query: 57 PVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXX 116
P + G D+ WR+ K GV+ GA+ +++L L + ++++ +
Sbjct: 148 PKRRGSSGSVVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTI 205
Query: 117 X---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASG 166
+ I+K+ P EV + EE + +++ +N LR +
Sbjct: 206 SFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLV 265
Query: 167 RDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIE 226
DL L +WV + VG+ N LTL +AL+ L VPV+YE+++ +ID A
Sbjct: 266 DDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKN 325
Query: 227 IKKQYAVFDAKV 238
+K A AK+
Sbjct: 326 VKDAMAKIQAKI 337
>UNIPROTKB|E1BUW7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00821143 Ensembl:ENSGALT00000040236 ArrayExpress:E1BUW7
Uniprot:E1BUW7
Length = 347
Score = 130 (50.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 53/210 (25%), Positives = 90/210 (42%)
Query: 42 SSVKAD--IYRLFGRERPV-HQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEY 98
SS AD ++ L P+ H G D+ WR+ K GV+ GA+ +++L L +
Sbjct: 134 SSGSADETLFALPATSEPLMHS--SAGNIVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVF 189
Query: 99 HLLTLVCHTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVASA 148
++++ + + I+K+ P +V + EE + +S
Sbjct: 190 SIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSV 249
Query: 149 FRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVL 208
+N LR + DL L +WV + VG+ N LTL +AL+ L VPV+
Sbjct: 250 VLGHINGTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVI 309
Query: 209 YEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
YE+++ +ID +K A AK+
Sbjct: 310 YERHQAQIDHYLGLVNKNVKDAMAKIQAKI 339
>UNIPROTKB|F1NH23 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 OMA:PFLNKQK GeneTree:ENSGT00390000009934
EMBL:AADN02003912 EMBL:AADN02003911 IPI:IPI00586633
Ensembl:ENSGALT00000019593 ArrayExpress:F1NH23 Uniprot:F1NH23
Length = 760
Score = 134 (52.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 46/193 (23%), Positives = 91/193 (47%)
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
K ++ WR+ K G++ G+ + +LF L ++ ++++V + + +
Sbjct: 572 KAINLLYWRDIK-QTGIVFGSLLL-LLFSLTQFSVVSVVAYLALAGLSATISFRIYKSVL 629
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
++K P E++L ++ + ++ +N LR + +DL L
Sbjct: 630 QAVQKTDEGHPFKAYLDMEMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKF 689
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+W+L+ VG+ N LTL +A+V + +PV+Y+KY+ +ID ++ V
Sbjct: 690 AVLMWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQYL--GLVRTHINTVV-- 745
Query: 236 AKVLSKIPVKAKR 248
AK+ +KIP AKR
Sbjct: 746 AKIQAKIP-GAKR 757
>UNIPROTKB|I3L6J1 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 CTD:6252 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:CU469078 EMBL:FP340567
RefSeq:NP_001231569.1 RefSeq:XP_003480528.1 UniGene:Ssc.13916
Ensembl:ENSSSCT00000022854 GeneID:100152394 KEGG:ssc:100152394
Uniprot:I3L6J1
Length = 770
Score = 134 (52.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 49/193 (25%), Positives = 88/193 (45%)
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
K D+ WR+ K G++ G+ + +LF L ++ ++++V + + +
Sbjct: 582 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 639
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
++K P E+ L +E + + +N LR + +DL L
Sbjct: 640 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 699
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID I AV
Sbjct: 700 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV- 755
Query: 236 AKVLSKIPVKAKR 248
AK+ +KIP AKR
Sbjct: 756 AKIQAKIP-GAKR 767
>UNIPROTKB|Q16799 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 EMBL:CH471061 GO:GO:0030182 GO:GO:0004871
GO:GO:0030176 PANTHER:PTHR10994 HOVERGEN:HBG008971 EMBL:L10333
EMBL:L10334 EMBL:L10335 EMBL:BC090862 EMBL:BC000314 EMBL:BC003003
IPI:IPI00003971 IPI:IPI00219812 IPI:IPI00219813 PIR:A46583
PIR:I60904 RefSeq:NP_066959.1 RefSeq:NP_996734.1 UniGene:Hs.368626
ProteinModelPortal:Q16799 SMR:Q16799 IntAct:Q16799 MINT:MINT-154554
STRING:Q16799 PhosphoSite:Q16799 DMDM:12643733 PaxDb:Q16799
PRIDE:Q16799 Ensembl:ENST00000267484 Ensembl:ENST00000342503
GeneID:6252 KEGG:hsa:6252 UCSC:uc001xek.2 UCSC:uc001xem.1
UCSC:uc001xen.1 CTD:6252 GeneCards:GC14M060062 HGNC:HGNC:10467
HPA:CAB002745 MIM:600865 neXtProt:NX_Q16799 PharmGKB:PA34880
eggNOG:NOG306139 HOGENOM:HOG000134444 InParanoid:Q16799 OMA:PFLNKQK
OrthoDB:EOG437RDX PhylomeDB:Q16799 ChiTaRS:RTN1 GenomeRNAi:6252
NextBio:24277 ArrayExpress:Q16799 Bgee:Q16799 CleanEx:HS_RTN1
Genevestigator:Q16799 GermOnline:ENSG00000139970 Uniprot:Q16799
Length = 776
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 49/193 (25%), Positives = 88/193 (45%)
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
K D+ WR+ K G++ G+ + +LF L ++ ++++V + + +
Sbjct: 588 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 645
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
++K P E+ L +E + + +N LR + +DL L
Sbjct: 646 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 705
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID I AV
Sbjct: 706 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV- 761
Query: 236 AKVLSKIPVKAKR 248
AK+ +KIP AKR
Sbjct: 762 AKIQAKIP-GAKR 773
>MGI|MGI:1933947 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1933947
GO:GO:0005783 GO:GO:0016021 GO:GO:0030182 GO:GO:0005789
PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
HOGENOM:HOG000134444 OrthoDB:EOG437RDX ChiTaRS:RTN1 EMBL:AB074899
EMBL:BC030455 EMBL:BC053926 EMBL:BC058579 EMBL:BK001694
IPI:IPI00395193 RefSeq:NP_001007597.1 RefSeq:NP_703187.2
UniGene:Mm.221275 ProteinModelPortal:Q8K0T0 SMR:Q8K0T0
IntAct:Q8K0T0 STRING:Q8K0T0 PhosphoSite:Q8K0T0 PaxDb:Q8K0T0
PRIDE:Q8K0T0 Ensembl:ENSMUST00000078505 GeneID:104001
KEGG:mmu:104001 GeneTree:ENSGT00390000009934 InParanoid:Q8K0T0
NextBio:356325 Bgee:Q8K0T0 CleanEx:MM_RTN1 Genevestigator:Q8K0T0
GermOnline:ENSMUSG00000021087 Uniprot:Q8K0T0
Length = 780
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 47/197 (23%), Positives = 90/197 (45%)
Query: 62 FGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---W 118
F K D+ WR+ K G++ G+ + +LF L ++ ++++V + +
Sbjct: 588 FNKQKAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIY 645
Query: 119 ANAHTFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKS 171
+ ++K P E+ L +E + ++ +N LR + +DL
Sbjct: 646 KSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVD 705
Query: 172 FLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQY 231
L +W+L+ VG+ N LTL +A+V + +PV+Y K++ ++D ++
Sbjct: 706 SLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYL--GLVRTHINT 763
Query: 232 AVFDAKVLSKIPVKAKR 248
V AK+ +KIP AKR
Sbjct: 764 VV--AKIQAKIP-GAKR 777
>UNIPROTKB|H7C106 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 ProteinModelPortal:H7C106 PRIDE:H7C106
Ensembl:ENST00000438462 OMA:NWKCQAI Uniprot:H7C106
Length = 203
Score = 123 (48.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 50 RLFGRERPVH-QVFG---GG--KPA-DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLT 102
R GR RPV + G GG P D+ WR+ K GV+ GA+ +++L L + +++
Sbjct: 5 RTSGRWRPVWLEARGEGWGGPWSPVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVS 62
Query: 103 LVCHTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVASAFRIE 152
+ + + I+K+ P EV + EE + +++
Sbjct: 63 VTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGH 122
Query: 153 LNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKY 212
+N LR + DL L +WV + VG+ N LTL +AL+ L VPV+YE++
Sbjct: 123 VNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERH 182
Query: 213 EDKID 217
+ +ID
Sbjct: 183 QAQID 187
>UNIPROTKB|F1P5B1 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
Uniprot:F1P5B1
Length = 326
Score = 128 (50.1 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 56/221 (25%), Positives = 93/221 (42%)
Query: 37 EPAAQSSVKADIYRLF-GRERPV-------HQVFGGGKPA-DVFLWRNKKISAGVLGGAT 87
+PAA SS + G ERP +V G D+ WR+ K GV+ GA+
Sbjct: 100 QPAASSSSSSAASTPSPGTERPAPPQPEPRRRVSSSGSAVVDLLYWRDIK-KTGVVFGAS 158
Query: 88 AIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHL 137
+++L L + ++++ + + I+K+ P +V +
Sbjct: 159 -LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAV 217
Query: 138 PEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYI 197
EE + +S +N LR + DL L +WV + VG+ N LTL +
Sbjct: 218 SEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLIL 277
Query: 198 ALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
AL+ L VPV+YE+++ +ID +K A AK+
Sbjct: 278 ALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 318
>UNIPROTKB|F5H774 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AP006289 PANTHER:PTHR10994 CTD:10313 EMBL:AP000753
RefSeq:NP_001252519.1 UniGene:Hs.473761 GeneID:10313 KEGG:hsa:10313
HGNC:HGNC:10469 ChiTaRS:RTN3 IPI:IPI01009279
ProteinModelPortal:F5H774 SMR:F5H774 Ensembl:ENST00000540798
UCSC:uc009yov.3 ArrayExpress:F5H774 Bgee:F5H774 Uniprot:F5H774
Length = 920
Score = 133 (51.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G + G T I +L L + ++++V + + + +
Sbjct: 734 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 791
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P ++ L E F +A + +N A ++ + DL L
Sbjct: 792 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 851
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+++ VG+ N +TL +A +L+ VP++YEKY+ +ID A + K ++ + K+
Sbjct: 852 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 907
Query: 239 LSKIPVKAKR 248
+K+P AK+
Sbjct: 908 QAKLPGIAKK 917
>UNIPROTKB|O95197 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0005615
"extracellular space" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 GO:GO:0016021 GO:GO:0006915
GO:GO:0019048 GO:GO:0005615 GO:GO:0000139 GO:GO:0006950
GO:GO:0016192 GO:GO:0005789 EMBL:CH471076 EMBL:AP006289
PANTHER:PTHR10994 GO:GO:0071786 CTD:10313 eggNOG:NOG303514
EMBL:AF059524 EMBL:AF059529 EMBL:AF059525 EMBL:AF059526
EMBL:AF059527 EMBL:AF059528 EMBL:AF119297 EMBL:AY427821
EMBL:AY750848 EMBL:AP000753 EMBL:AK297529 EMBL:AB209771
EMBL:AK075412 EMBL:AK222898 EMBL:AK295361 EMBL:BC000634
EMBL:BC010556 EMBL:BC011394 EMBL:BC022993 EMBL:BC100822
EMBL:BC100823 EMBL:BC105981 EMBL:BC105982 EMBL:BC118628
EMBL:BC118550 EMBL:BK001685 EMBL:BK001681 EMBL:BK001684
IPI:IPI00028946 IPI:IPI00394896 IPI:IPI00398795 IPI:IPI00412154
IPI:IPI00743293 RefSeq:NP_001252518.1 RefSeq:NP_001252519.1
RefSeq:NP_001252520.1 RefSeq:NP_006045.1 RefSeq:NP_958831.1
RefSeq:NP_958832.1 RefSeq:NP_958833.1 UniGene:Hs.473761
ProteinModelPortal:O95197 SMR:O95197 IntAct:O95197 STRING:O95197
PhosphoSite:O95197 PaxDb:O95197 PRIDE:O95197 DNASU:10313
Ensembl:ENST00000339997 Ensembl:ENST00000341307
Ensembl:ENST00000354497 Ensembl:ENST00000356000
Ensembl:ENST00000377819 Ensembl:ENST00000537981 GeneID:10313
KEGG:hsa:10313 UCSC:uc001nxm.3 UCSC:uc001nxn.3 UCSC:uc001nxo.3
UCSC:uc001nxp.3 UCSC:uc001nxq.3 GeneCards:GC11P063448
H-InvDB:HIX0021346 HGNC:HGNC:10469 HPA:HPA015649 HPA:HPA015650
MIM:604249 neXtProt:NX_O95197 PharmGKB:PA34882 HOVERGEN:HBG093922
InParanoid:O95197 OMA:KGRISTW ChiTaRS:RTN3 GenomeRNAi:10313
NextBio:39085 ArrayExpress:O95197 Bgee:O95197 Genevestigator:O95197
GermOnline:ENSG00000133318 Uniprot:O95197
Length = 1032
Score = 133 (51.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G + G T I +L L + ++++V + + + +
Sbjct: 846 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P ++ L E F +A + +N A ++ + DL L
Sbjct: 904 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 963
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+++ VG+ N +TL +A +L+ VP++YEKY+ +ID A + K ++ + K+
Sbjct: 964 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 1019
Query: 239 LSKIPVKAKR 248
+K+P AK+
Sbjct: 1020 QAKLPGIAKK 1029
>UNIPROTKB|F1Q231 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000024697 Uniprot:F1Q231
Length = 704
Score = 130 (50.8 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V + + + +
Sbjct: 519 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 576
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K P E+ L +E + + +N+ LR + +DL L
Sbjct: 577 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 636
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID ++ V AK+
Sbjct: 637 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYL--GLVRTHINTVV--AKI 692
Query: 239 LSKIPVKAKR 248
+KIP AKR
Sbjct: 693 QAKIP-GAKR 701
>WB|WBGene00004336 [details] [associations]
symbol:ret-1 species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GeneTree:ENSGT00550000074593 PANTHER:PTHR10994 EMBL:Z78066
GeneID:179981 KEGG:cel:CELE_W06A7.3 CTD:179981 NextBio:907638
EMBL:Z78067 RefSeq:NP_001123026.1 ProteinModelPortal:G5EDI2
SMR:G5EDI2 IntAct:G5EDI2 EnsemblMetazoa:W06A7.3f WormBase:W06A7.3f
OMA:EITQNDD Uniprot:G5EDI2
Length = 3303
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/196 (28%), Positives = 85/196 (43%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKA 128
DV WR+ K SA VL + A+ VLF L +Y LLT+V ++ + + + KK
Sbjct: 3106 DVIYWRDAKKSAIVL--SLALLVLFVLAKYPLLTVVTYSLLLALGAAAGFRSIFSVFKKV 3163
Query: 129 PPCIPEVHLPEEPFLQV-ASAFRI--ELNHAFA---VLRSIASGRDLKSFLMAIA----- 177
I + E PF ++ A + E HA A V + LK + +
Sbjct: 3164 EAQIKKTD-SEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVESPLESI 3222
Query: 178 ----ALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAV 233
LW L+ + SW + TL + L+ + VP +YE ++ IDP +K +
Sbjct: 3223 KFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHLATISGHLKNVQNI 3282
Query: 234 FDAKV--LSKIPVKAK 247
D K+ L PV A+
Sbjct: 3283 IDEKLPFLRSAPVAAE 3298
>ZFIN|ZDB-GENE-030710-2 [details] [associations]
symbol:rtn4b "reticulon 4b" species:7955 "Danio
rerio" [GO:0005199 "structural constituent of cell wall"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 InterPro:IPR003882 Pfam:PF02453 PRINTS:PR01218
PROSITE:PS50845 ZFIN:ZDB-GENE-030710-2 GO:GO:0005783 GO:GO:0005199
PANTHER:PTHR10994 EMBL:AY555051 IPI:IPI00650525
RefSeq:NP_001035425.1 UniGene:Dr.79909 ProteinModelPortal:Q4G5V0
PRIDE:Q4G5V0 GeneID:678586 KEGG:dre:678586 CTD:678586
HOVERGEN:HBG096757 InParanoid:Q4G5V0 NextBio:20902411 Bgee:Q4G5V0
Uniprot:Q4G5V0
Length = 875
Score = 133 (51.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 55/201 (27%), Positives = 85/201 (42%)
Query: 65 GKPAD------VFLWRNKKISAGVLGGATAIWV------LFELFEYHLLTLVCHTXXXXX 112
G PAD + WR+ + SA VLG + + + + Y L L+ T
Sbjct: 680 GAPADPTAVLQLLYWRDVRASALVLGSLLLLLLFLSCCSVISVLSYSALCLLTLTLSTRV 739
Query: 113 XXXXXWA-----NAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGR 167
A + H F + +V L + + A +N A LR +
Sbjct: 740 FTAVLQAMRKTEDGHPFRQYLER---DVLLSADAVHTHSEALLRRINTALVELRRLFLVE 796
Query: 168 DLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEI 227
DL L LW+L+ VGSW N LTL IAL+ P+ YE+++ +ID +MI
Sbjct: 797 DLVDSLKLAVGLWLLTYVGSWFNGLTLLIIALIGAFSGPIAYERHQSEIDQFI--SMINT 854
Query: 228 KKQYAVFDAKVLSKIPVKAKR 248
+ + A+ KVL+ +P K+
Sbjct: 855 QMREAL--GKVLAMVPGGKKK 873
Score = 36 (17.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 38 PAAQSSVKADIYRLFGRERPVHQVFGGGKPADVF 71
PA + V +++ ER V G D F
Sbjct: 318 PAGEPEVSVSVFQTLPSERCRSLVSSAGLAMDAF 351
>UNIPROTKB|F1P5B2 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00594028 Ensembl:ENSGALT00000040233 ArrayExpress:F1P5B2
Uniprot:F1P5B2
Length = 344
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/207 (24%), Positives = 86/207 (41%)
Query: 42 SSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLL 101
SS AD LF + D+ WR+ K GV+ GA+ +++L L + ++
Sbjct: 133 SSGSAD-ETLFALPATSEPLMHSSAVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIV 189
Query: 102 TLVCHTXXXXXXXXXX---WANAHTFIKKAPPCIP-------EVHLPEEPFLQVASAFRI 151
++ + + I+K+ P +V + EE + +S
Sbjct: 190 SVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLG 249
Query: 152 ELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEK 211
+N LR + DL L +WV + VG+ N LTL +AL+ L VPV+YE+
Sbjct: 250 HINGTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYER 309
Query: 212 YEDKIDPLAEKAMIEIKKQYAVFDAKV 238
++ +ID +K A AK+
Sbjct: 310 HQAQIDHYLGLVNKNVKDAMAKIQAKI 336
>RGD|620988 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization"
evidence=IEA;ISO] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
CTD:10313 eggNOG:NOG303514 HOVERGEN:HBG093922 EMBL:AY164698
EMBL:AY496443 EMBL:AF442357 EMBL:AF442358 EMBL:BC062068
EMBL:BC107448 IPI:IPI00421904 IPI:IPI00564622 RefSeq:NP_001009953.2
RefSeq:NP_543185.2 UniGene:Rn.11652 ProteinModelPortal:Q6RJR6
SMR:Q6RJR6 IntAct:Q6RJR6 STRING:Q6RJR6 PRIDE:Q6RJR6
Ensembl:ENSRNOT00000028785 Ensembl:ENSRNOT00000049812 GeneID:140945
KEGG:rno:140945 UCSC:RGD:620988 HOGENOM:HOG000154220 NextBio:620854
ArrayExpress:Q6RJR6 Genevestigator:Q6RJR6 Uniprot:Q6RJR6
Length = 940
Score = 130 (50.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G + G T I +L L + ++++V + + + +
Sbjct: 754 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P ++ L E F +A + +N A ++ + DL L
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+++ VG+ N +TL +A +L+ VP++YEKY+ +ID A + K ++ + K+
Sbjct: 872 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 927
Query: 239 LSKIPVKAKR 248
+K+P AK+
Sbjct: 928 QAKLPGIAKK 937
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 6 ENPAEPPMEKVSEKIXXXXXXXXXXXXXXNEEPAAQSSVKADIY 49
ENP+ + + EK N+E + +V++++Y
Sbjct: 448 ENPSVKNNKVLPEKSDSLPSAAVKTSERENKETTSHETVRSEMY 491
>MGI|MGI:1339970 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1339970
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 CTD:10313 eggNOG:NOG303514
OrthoDB:EOG4229M0 HOVERGEN:HBG093922 ChiTaRS:RTN3 EMBL:AB046114
EMBL:BK001796 EMBL:AY164700 EMBL:AY507126 EMBL:AY507127
EMBL:AY427822 EMBL:AY750849 EMBL:AF195940 EMBL:AK032109
EMBL:AK036892 EMBL:AK049845 EMBL:AK075883 EMBL:AK088670
EMBL:AK146505 EMBL:AK148792 EMBL:AK148947 EMBL:AK165683
EMBL:BC014697 EMBL:BC036717 EMBL:BC079882 IPI:IPI00112948
IPI:IPI00470981 IPI:IPI00474993 IPI:IPI00480414 IPI:IPI00750847
RefSeq:NP_001003933.1 RefSeq:NP_001003934.1 RefSeq:NP_001258415.1
RefSeq:NP_001258416.1 RefSeq:NP_444306.1 UniGene:Mm.246990
ProteinModelPortal:Q9ES97 SMR:Q9ES97 IntAct:Q9ES97 STRING:Q9ES97
PhosphoSite:Q9ES97 PaxDb:Q9ES97 PRIDE:Q9ES97
Ensembl:ENSMUST00000025667 Ensembl:ENSMUST00000065304
Ensembl:ENSMUST00000088169 Ensembl:ENSMUST00000088171 GeneID:20168
KEGG:mmu:20168 UCSC:uc008glb.1 UCSC:uc008gld.1 UCSC:uc008gle.1
UCSC:uc012bhv.1 InParanoid:Q9ES97 OMA:LTRQFSH NextBio:297685
Bgee:Q9ES97 CleanEx:MM_RTN3 Genevestigator:Q9ES97
GermOnline:ENSMUSG00000024758 Uniprot:Q9ES97
Length = 964
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G + G T I +L L + ++++V + + + +
Sbjct: 778 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P ++ L E F +A + +N A ++ + DL L
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+++ VG+ N +TL +A +L+ VP++YEKY+ +ID A + K ++ + K+
Sbjct: 896 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 951
Query: 239 LSKIPVKAKR 248
+K+P AK+
Sbjct: 952 QAKLPGIAKK 961
>UNIPROTKB|A7MC64 [details] [associations]
symbol:rtn1 "Reticulon-1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994
HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BC118846
EMBL:BC152060 EMBL:AL635298 EMBL:BK004008 RefSeq:NP_001078819.2
UniGene:Str.40113 ProteinModelPortal:A7MC64 SMR:A7MC64
STRING:A7MC64 Ensembl:ENSXETT00000037003 GeneID:677736
KEGG:xtr:677736 Xenbase:XB-GENE-1011333 Bgee:A7MC64 Uniprot:A7MC64
Length = 764
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/188 (22%), Positives = 84/188 (44%)
Query: 66 KPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAH 122
K ++ WR+ K G++ G+ + +LF L ++ +++++ + + +
Sbjct: 577 KAIELLYWRDIK-QTGIVFGSVLL-MLFSLTQFSVVSVIAYLALAALSATISFRIYKSVL 634
Query: 123 TFIKKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMA 175
++K P E+ L +E + + N LR + +DL L
Sbjct: 635 QAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKF 694
Query: 176 IAALWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFD 235
+W+L+ VG+ N LTL +A+V + +PV+Y+KY+ +ID ++ V
Sbjct: 695 AVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYL--GLVRTNMNTIV-- 750
Query: 236 AKVLSKIP 243
K+ +KIP
Sbjct: 751 TKIQAKIP 758
>MGI|MGI:1915835 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=ISO;IMP]
[GO:0010977 "negative regulation of neuron projection development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=IMP] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISO;ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030517 "negative
regulation of axon extension" evidence=ISO;ISS;IMP] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0033603 "positive
regulation of dopamine secretion" evidence=ISO] [GO:0042995 "cell
projection" evidence=IDA] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO;IDA]
[GO:0043209 "myelin sheath" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=ISO] [GO:0048679 "regulation
of axon regeneration" evidence=ISO] [GO:0050771 "negative
regulation of axonogenesis" evidence=ISO] [GO:0051930 "regulation
of sensory perception of pain" evidence=ISO] [GO:0051960
"regulation of nervous system development" evidence=IMP]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0070571 "negative regulation of neuron projection
regeneration" evidence=ISO] [GO:0071786 "endoplasmic reticulum
tubular network organization" evidence=ISO] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=ISO;IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1915835
GO:GO:0005886 GO:GO:0005635 GO:GO:0043234 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0042995 GO:GO:0060317 GO:GO:0007413
GO:GO:0048709 GO:GO:0043209 GO:GO:0030517 GO:GO:0021553
EMBL:AL929371 UniGene:Mm.445271 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
ChiTaRS:RTN4 GO:GO:0070571 GO:GO:0048679 GO:GO:2000172
EMBL:AY102280 EMBL:AY102284 EMBL:AY102286 EMBL:AF326337
EMBL:AY114152 EMBL:AK220511 EMBL:BC032192 EMBL:BC056373
EMBL:AB073672 EMBL:AK003859 IPI:IPI00120415 IPI:IPI00270767
IPI:IPI00469392 RefSeq:NP_077188.1 RefSeq:NP_918940.1
RefSeq:NP_918943.1 UniGene:Mm.192580 UniGene:Mm.440639
UniGene:Mm.488364 PDB:2KO2 PDBsum:2KO2 ProteinModelPortal:Q99P72
SMR:Q99P72 IntAct:Q99P72 MINT:MINT-188330 STRING:Q99P72
PhosphoSite:Q99P72 PaxDb:Q99P72 PRIDE:Q99P72
Ensembl:ENSMUST00000060992 Ensembl:ENSMUST00000102841
Ensembl:ENSMUST00000102843 GeneID:68585 KEGG:mmu:68585
UCSC:uc007ihk.2 UCSC:uc007ihn.2 InParanoid:Q99P72 OMA:HTSENKT
OrthoDB:EOG4XH010 EvolutionaryTrace:Q99P72 NextBio:327502
Bgee:Q99P72 CleanEx:MM_RTN4 Genevestigator:Q99P72
GermOnline:ENSMUSG00000020458 Uniprot:Q99P72
Length = 1162
Score = 128 (50.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 45/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 977 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1034
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 1035 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1094
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L +PV+YE+++ +ID A +K A AK+
Sbjct: 1095 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMAKIQAKI 1154
>UNIPROTKB|D4AEM9 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:620989
GO:GO:0005783 PANTHER:PTHR10994 IPI:IPI00568363
Ensembl:ENSRNOT00000051817 ArrayExpress:D4AEM9 Uniprot:D4AEM9
Length = 1045
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 45/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 860 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 917
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 918 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 977
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L +PV+YE+++ +ID A +K A AK+
Sbjct: 978 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQAKI 1037
>UNIPROTKB|F1Q2B3 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000039479 Uniprot:F1Q2B3
Length = 715
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 42/183 (22%), Positives = 81/183 (44%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V + + + +
Sbjct: 524 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 581
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K P E+ L +E + + +N+ LR + +DL L
Sbjct: 582 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 641
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+L+ VG+ N LTL +A+V + +PV+Y K++ +ID I A D +
Sbjct: 642 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKSDLQH 701
Query: 239 LSK 241
SK
Sbjct: 702 TSK 704
>RGD|620989 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007413 "axonal fasciculation" evidence=ISO;IDA]
[GO:0007568 "aging" evidence=IEP] [GO:0010977 "negative regulation
of neuron projection development" evidence=IDA] [GO:0014823
"response to activity" evidence=IEP] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0021553 "olfactory nerve development"
evidence=IEP] [GO:0021801 "cerebral cortex radial glia guided
migration" evidence=ISO;ISS] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO;IDA] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0030334 "regulation of
cell migration" evidence=ISO] [GO:0030517 "negative regulation of
axon extension" evidence=ISO;ISS;IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0033603 "positive regulation of dopamine
secretion" evidence=IMP] [GO:0042995 "cell projection"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043209
"myelin sheath" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IDA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IDA] [GO:0048679 "regulation
of axon regeneration" evidence=IDA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] [GO:0050771 "negative regulation of
axonogenesis" evidence=IDA;IMP] [GO:0051930 "regulation of sensory
perception of pain" evidence=IDA] [GO:0051960 "regulation of
nervous system development" evidence=ISO] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=ISO] [GO:0070571
"negative regulation of neuron projection regeneration"
evidence=IMP] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISO;IDA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 RGD:620989 GO:GO:0005886 GO:GO:0005635
GO:GO:0043234 GO:GO:0032403 GO:GO:0014823 GO:GO:0007568
GO:GO:0051930 GO:GO:0043025 GO:GO:0033603 GO:GO:0045665
GO:GO:0043005 GO:GO:0001525 GO:GO:0030334 GO:GO:0030176
GO:GO:0060317 GO:GO:0007413 GO:GO:0048709 GO:GO:0043209
GO:GO:0030517 GO:GO:0021553 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
GO:GO:0070571 GO:GO:0048679 GO:GO:2000172 OrthoDB:EOG4XH010
EMBL:AF051335 EMBL:AJ242961 EMBL:AJ242962 EMBL:AJ242963
EMBL:AF132045 EMBL:AF132046 IPI:IPI00230986 IPI:IPI00230987
IPI:IPI00231765 IPI:IPI00778998 RefSeq:NP_114019.1 UniGene:Rn.1348
UniGene:Rn.163269 ProteinModelPortal:Q9JK11 SMR:Q9JK11
IntAct:Q9JK11 STRING:Q9JK11 PhosphoSite:Q9JK11 PRIDE:Q9JK11
Ensembl:ENSRNOT00000006957 Ensembl:ENSRNOT00000042965
Ensembl:ENSRNOT00000056823 GeneID:83765 KEGG:rno:83765
UCSC:RGD:620989 HOGENOM:HOG000148576 InParanoid:Q9JK11
NextBio:616333 ArrayExpress:Q9JK11 Genevestigator:Q9JK11
GermOnline:ENSRNOG00000004621 Uniprot:Q9JK11
Length = 1163
Score = 127 (49.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 45/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L +PV+YE+++ +ID A +K A AK+
Sbjct: 1096 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQAKI 1155
>UNIPROTKB|F1LQN3 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IEA]
[GO:2000172 "regulation of branching morphogenesis of a nerve"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620989 GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 IPI:IPI00231765
PRIDE:F1LQN3 Ensembl:ENSRNOT00000006443 ArrayExpress:F1LQN3
Uniprot:F1LQN3
Length = 1163
Score = 127 (49.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 45/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L +PV+YE+++ +ID A +K A AK+
Sbjct: 1096 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQAKI 1155
>UNIPROTKB|F1NNJ7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00680876
Ensembl:ENSGALT00000031997 ArrayExpress:F1NNJ7 Uniprot:F1NNJ7
Length = 659
Score = 124 (48.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 474 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 531
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P +V + EE + +S +N LR + DL L
Sbjct: 532 QKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVL 591
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID +K A AK+
Sbjct: 592 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 651
>UNIPROTKB|E2R925 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03007528
EMBL:AAEX03007529 Ensembl:ENSCAFT00000004428 Uniprot:E2R925
Length = 1186
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 1001 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVIQAI 1058
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 1059 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1118
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID A +K A AK+
Sbjct: 1119 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAKIQAKI 1178
>UNIPROTKB|J9P0R7 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:HTSENKT
EMBL:AAEX03007528 EMBL:AAEX03007529 Ensembl:ENSCAFT00000045541
Uniprot:J9P0R7
Length = 1198
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 1013 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVIQAI 1070
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 1071 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1130
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID A +K A AK+
Sbjct: 1131 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAKIQAKI 1190
>UNIPROTKB|F8WAM4 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01025160
ProteinModelPortal:F8WAM4 SMR:F8WAM4 PRIDE:F8WAM4
Ensembl:ENST00000354474 ArrayExpress:F8WAM4 Bgee:F8WAM4
Uniprot:F8WAM4
Length = 960
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 775 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 832
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 833 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 892
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID A +K A AK+
Sbjct: 893 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 952
Score = 36 (17.7 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 38 PAAQSSVKADIYRLFG 53
PAA S+ +I+ L G
Sbjct: 237 PAATESIATNIFPLLG 252
>UNIPROTKB|F1NCP4 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00581683
Ensembl:ENSGALT00000013194 ArrayExpress:F1NCP4 Uniprot:F1NCP4
Length = 1190
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 1005 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1062
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P +V + EE + +S +N LR + DL L
Sbjct: 1063 QKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVL 1122
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID +K A AK+
Sbjct: 1123 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 1182
>UNIPROTKB|G3X7U3 [details] [associations]
symbol:LOC100847649 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063501
Ensembl:ENSBTAT00000046142 Uniprot:G3X7U3
Length = 74
Score = 97 (39.2 bits), Expect = 0.00011, P = 0.00011
Identities = 22/70 (31%), Positives = 44/70 (62%)
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+W+++ VG+ N +TL +A +L+ +P++YEKY+ +ID A + K ++ + K+
Sbjct: 6 MWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 61
Query: 239 LSKIPVKAKR 248
+K+P AK+
Sbjct: 62 QAKLPGIAKK 71
>UNIPROTKB|Q9NQC3 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IDA] [GO:0030517 "negative regulation of axon extension"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=NAS] [GO:0006915
"apoptotic process" evidence=NAS] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=ISS] [GO:0007413 "axonal
fasciculation" evidence=ISS] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISS] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0030334
"regulation of cell migration" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005886 GO:GO:0005635 Reactome:REACT_111102
GO:GO:0006915 GO:GO:0048011 Pathway_Interaction_DB:p75ntrpathway
EMBL:CH471053 GO:GO:0043234 GO:GO:0042981 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0060317 GO:GO:0007413 GO:GO:0048709
GO:GO:0043209 GO:GO:0030517 GO:GO:0021553 EMBL:AC013414
GO:GO:0045687 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG306139 EMBL:AF087901 EMBL:AF148537 EMBL:AF148538
EMBL:AJ251383 EMBL:AJ251384 EMBL:AJ251385 EMBL:AB040462
EMBL:AB040463 EMBL:AF333336 EMBL:AY102285 EMBL:AY102276
EMBL:AY102277 EMBL:AY102278 EMBL:AY102279 EMBL:AY123245
EMBL:AY123246 EMBL:AY123247 EMBL:AY123248 EMBL:AY123249
EMBL:AY123250 EMBL:AB015639 EMBL:AF077050 EMBL:AF132047
EMBL:AF132048 EMBL:AF320999 EMBL:AB020693 EMBL:AF125103
EMBL:AF177332 EMBL:AC092461 EMBL:AC093165 EMBL:BC001035
EMBL:BC007109 EMBL:BC010737 EMBL:BC012619 EMBL:BC014366
EMBL:BC016165 EMBL:BC026788 EMBL:BC068991 EMBL:BC150182
EMBL:BC152425 EMBL:BC152555 EMBL:AF063601 IPI:IPI00021766
IPI:IPI00219207 IPI:IPI00298289 IPI:IPI00477663 IPI:IPI00478442
IPI:IPI00894213 RefSeq:NP_008939.1 RefSeq:NP_065393.1
RefSeq:NP_722550.1 RefSeq:NP_997403.1 RefSeq:NP_997404.1
UniGene:Hs.741208 PDB:2G31 PDB:2JV5 PDBsum:2G31 PDBsum:2JV5
ProteinModelPortal:Q9NQC3 SMR:Q9NQC3 IntAct:Q9NQC3 MINT:MINT-154434
STRING:Q9NQC3 PhosphoSite:Q9NQC3 DMDM:17369290 PaxDb:Q9NQC3
PRIDE:Q9NQC3 DNASU:57142 Ensembl:ENST00000317610
Ensembl:ENST00000337526 Ensembl:ENST00000357376
Ensembl:ENST00000357732 Ensembl:ENST00000394609
Ensembl:ENST00000394611 Ensembl:ENST00000404909
Ensembl:ENST00000405240 GeneID:57142 KEGG:hsa:57142 UCSC:uc002ryd.3
UCSC:uc002ryf.3 CTD:57142 GeneCards:GC02M055199 H-InvDB:HIX0002059
HGNC:HGNC:14085 HPA:CAB005388 MIM:604475 neXtProt:NX_Q9NQC3
PharmGKB:PA34883 HOVERGEN:HBG023134 InParanoid:Q9NQC3 ChiTaRS:RTN4
EvolutionaryTrace:Q9NQC3 GenomeRNAi:57142 NextBio:63075
PMAP-CutDB:Q9NQC3 ArrayExpress:Q9NQC3 Bgee:Q9NQC3
Genevestigator:Q9NQC3 GermOnline:ENSG00000115310 GO:GO:0070571
GO:GO:0048679 GO:GO:2000172 Uniprot:Q9NQC3
Length = 1192
Score = 127 (49.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 1007 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1064
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 1065 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1124
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID A +K A AK+
Sbjct: 1125 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 1184
Score = 36 (17.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 38 PAAQSSVKADIYRLFG 53
PAA S+ +I+ L G
Sbjct: 469 PAATESIATNIFPLLG 484
>UNIPROTKB|F1N405 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000172 "regulation of branching morphogenesis of a
nerve" evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IEA] [GO:0060317 "cardiac epithelial
to mesenchymal transition" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 OMA:HTSENKT
EMBL:DAAA02030906 EMBL:DAAA02030907 IPI:IPI00705603
Ensembl:ENSBTAT00000014745 ArrayExpress:F1N405 Uniprot:F1N405
Length = 1202
Score = 127 (49.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 69 DVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXX---WANAHTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ + + I
Sbjct: 1017 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1074
Query: 126 KKAPPCIP-------EVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAA 178
+K+ P EV + EE + +++ +N LR + DL L
Sbjct: 1075 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1134
Query: 179 LWVLSVVGSWCNFLTLFYIALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKV 238
+WV + VG+ N LTL +AL+ L VPV+YE+++ +ID A +K A AK+
Sbjct: 1135 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 1194
Score = 36 (17.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 3 EREENPAEPP 12
E EE PA PP
Sbjct: 141 EDEEPPARPP 150
>CGD|CAL0001315 [details] [associations]
symbol:orf19.3799 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0032541 "cortical endoplasmic
reticulum" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0071788 "endoplasmic reticulum tubular network maintenance"
evidence=IEA] [GO:0051292 "nuclear pore complex assembly"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
CGD:CAL0001315 GO:GO:0005783 EMBL:AACQ01000057 EMBL:AACQ01000056
PANTHER:PTHR10994 eggNOG:NOG116114 RefSeq:XP_717204.1
RefSeq:XP_717280.1 STRING:Q5A691 GeneID:3641084 GeneID:3641113
KEGG:cal:CaO19.11280 KEGG:cal:CaO19.3799 Uniprot:Q5A691
Length = 366
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 139 EEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIA 198
+E ++A+ F + L +F I D+++ L A ++L + SW + TL +I
Sbjct: 134 DEVLPELAN-FNVHLEESF---NKIVYSHDIETTLKAAGISYILYKLTSWFSLYTLIFIF 189
Query: 199 LVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAK 237
+VL+ VPV+Y+ Y+ +ID IK + A F K
Sbjct: 190 VVLIFTVPVIYKTYKKEIDAAVADITKTIKTKSAEFTEK 228
>UNIPROTKB|Q5A691 [details] [associations]
symbol:RTN1 "Potential conserved endoplasmic reticulum
protein" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 CGD:CAL0001315 GO:GO:0005783 EMBL:AACQ01000057
EMBL:AACQ01000056 PANTHER:PTHR10994 eggNOG:NOG116114
RefSeq:XP_717204.1 RefSeq:XP_717280.1 STRING:Q5A691 GeneID:3641084
GeneID:3641113 KEGG:cal:CaO19.11280 KEGG:cal:CaO19.3799
Uniprot:Q5A691
Length = 366
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 139 EEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIA 198
+E ++A+ F + L +F I D+++ L A ++L + SW + TL +I
Sbjct: 134 DEVLPELAN-FNVHLEESF---NKIVYSHDIETTLKAAGISYILYKLTSWFSLYTLIFIF 189
Query: 199 LVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAK 237
+VL+ VPV+Y+ Y+ +ID IK + A F K
Sbjct: 190 VVLIFTVPVIYKTYKKEIDAAVADITKTIKTKSAEFTEK 228
>ZFIN|ZDB-GENE-030710-1 [details] [associations]
symbol:rtn4a "reticulon 4a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0002040 "sprouting angiogenesis"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IGI;IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-1 GO:GO:0005783 GO:GO:0007411 GO:GO:0002040
GO:GO:0048936 PANTHER:PTHR10994 HOVERGEN:HBG000838
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BX324134
EMBL:AY555039 IPI:IPI00650155 RefSeq:NP_001073381.1
UniGene:Dr.121711 UniGene:Dr.47577 SMR:Q4G5W2 STRING:Q4G5W2
Ensembl:ENSDART00000081966 GeneID:447816 KEGG:dre:447816 CTD:447816
InParanoid:Q4G5W2 NextBio:20832340 Uniprot:Q4G5W2
Length = 322
Score = 109 (43.4 bits), Expect = 0.00083, P = 0.00083
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 137 LPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFY 196
LP E + + + + +N LR + DL L +W+L+ VG+ N LTL
Sbjct: 213 LPAEMVHKYSDSTLVHINTVIKELRRLFLVEDLVDSLKFAVLMWILTYVGALFNGLTLII 272
Query: 197 IALVLLHIVPVLYEKYEDKIDPLAEKAMIEIKKQYAVFDAKVLSKIP 243
+ + PV+YEK++ +ID + KQ+ K+ +KIP
Sbjct: 273 LGFIGAFSCPVIYEKHQAQIDHYYGL----VNKQFKDVVGKIQAKIP 315
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 249 225 0.00077 113 3 11 22 0.49 32
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 597 (63 KB)
Total size of DFA: 177 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.68u 0.10s 18.78t Elapsed: 00:00:02
Total cpu time: 18.69u 0.10s 18.79t Elapsed: 00:00:02
Start: Fri May 10 23:50:00 2013 End: Fri May 10 23:50:02 2013