RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 025724
(249 letters)
>1nuw_A Fructose-1,6-bisphosphatase; allosteric enzymes, gluconeogenesis,
hydrola; HET: F6P; 1.30A {Sus scrofa} SCOP: e.7.1.1 PDB:
1eyi_A* 1eyj_A* 1cnq_A* 1eyk_A* 1nux_A* 1nuy_A* 1nuz_A*
1nv0_A* 1nv1_A* 1nv2_A* 1nv3_A* 1nv4_A* 1nv5_A* 1nv6_A*
1nv7_A* 1q9d_A* 2qvu_A* 2qvv_A* 1fj6_A* 1fj9_A* ...
Length = 337
Score = 313 bits (804), Expect = e-108
Identities = 110/200 (55%), Positives = 144/200 (72%), Gaps = 1/200 (0%)
Query: 6 DAHRTDLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGE 65
A T+++T+TRFV+ E+ + G+ + LL+ + K + +AV KAG+A L G+AG
Sbjct: 4 AAFDTNIVTLTRFVM-EEGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGS 62
Query: 66 TNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDG 125
TNV G++ KKLDVLSND+ + L SS TC+LVSEED+ AI VEP KRG+Y V FDPLDG
Sbjct: 63 TNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDG 122
Query: 126 SSNIDCGVSIGTIFGIYMMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVN 185
SSNIDC VSIGTIFGIY + EP+ D LQPG N++AAGY +YGS+ LVL+ +GVN
Sbjct: 123 SSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVN 182
Query: 186 GFTLDPSLGEFILTHPDIKV 205
F LDP++GEFIL D+K+
Sbjct: 183 CFMLDPAIGEFILVDRDVKI 202
>2fhy_A Fructose-1,6-bisphosphatase 1; allosteric inhibitors human fbpase,
benzoxazole, intersubunit allosteric inhibition of human
fpbase, hydrolase; HET: A37; 2.95A {Homo sapiens}
Length = 374
Score = 311 bits (799), Expect = e-106
Identities = 111/196 (56%), Positives = 142/196 (72%), Gaps = 1/196 (0%)
Query: 10 TDLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQ 69
TD+ T+TRFV+ E+ + G+ + LL+ + K + SAV KAG+A L G+AG TNV
Sbjct: 45 TDVNTLTRFVM-EEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVT 103
Query: 70 GEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNI 129
G++ KKLDVLSND+ + L SS TC+LVSEED+ AI VEP KRG+Y V FDPLDGSSNI
Sbjct: 104 GDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNI 163
Query: 130 DCGVSIGTIFGIYMMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTL 189
DC VS+GTIFGIY K + EP+ D LQPG N++AAGY +YGS+ LVL+ GVN F L
Sbjct: 164 DCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDCGVNCFML 223
Query: 190 DPSLGEFILTHPDIKV 205
DP++GEFIL D+K+
Sbjct: 224 DPAIGEFILVDKDVKI 239
>2gq1_A Fructose-1,6-bisphosphatase; allosteric activator site, quaternary
conformation, hydrolas; 1.45A {Escherichia coli} PDB:
2owz_A* 2ox3_A* 2q8m_A* 2qvr_A*
Length = 332
Score = 308 bits (791), Expect = e-106
Identities = 85/196 (43%), Positives = 119/196 (60%), Gaps = 2/196 (1%)
Query: 12 LMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGE 71
+ T+ F++ +Q + + G+ + LLS I LG K + +NKAGL ++G +G NVQGE
Sbjct: 1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE 60
Query: 72 EQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDC 131
Q+KLD+ +N+ AL + + SEE++E + E + +Y V+ DPLDGSSNID
Sbjct: 61 VQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDV 120
Query: 132 GVSIGTIFGIYMMKD--SHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTL 189
VS+GTIF IY T +D LQPGN +AAGY +YGSS LV +TG GV+ FT
Sbjct: 121 NVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTY 180
Query: 190 DPSLGEFILTHPDIKV 205
DPSLG F L ++
Sbjct: 181 DPSLGVFCLCQERMRF 196
>1dcu_A Fructose-1,6-bisphosphatase; chloroplast, photosynthesis, redox
regulation, thioredoxin, allostery, hydrolase; 2.20A
{Pisum sativum} SCOP: e.7.1.1 PDB: 1d9q_A 1dbz_A 1spi_A
Length = 357
Score = 288 bits (739), Expect = 1e-97
Identities = 96/221 (43%), Positives = 133/221 (60%), Gaps = 18/221 (8%)
Query: 2 DHEADAHRTDLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIG 61
+++T+T ++L +Q + + +I+LS I + CK + S V +A ++ L G
Sbjct: 8 SETKKRSGYEIITLTSWLL-QQEQKGIIDAELTIVLSSISMACKQIASLVQRANISNLTG 66
Query: 62 LAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFD 121
G N+QGE+QKKLDV+SN+VF L SSGRT I+ SEE++ + VE S G Y VVFD
Sbjct: 67 TQGAVNIQGEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFD 126
Query: 122 PLDGSSNIDCGVSIGTIFGIYMMKD-----------------SHEPTLDDVLQPGNNMLA 164
PLDGSSN+D VS G+IFGIY D + + +V QPG+N+LA
Sbjct: 127 PLDGSSNLDAAVSTGSIFGIYSPNDECLPDFGDDSDDNTLGTEEQRCIVNVCQPGSNLLA 186
Query: 165 AGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHPDIKV 205
AGYCMY SS VL+ G GV FTLDP GEF+LT ++++
Sbjct: 187 AGYCMYSSSVIFVLTIGKGVFVFTLDPLYGEFVLTQENLQI 227
>3uks_A Sedoheptulose-1,7 bisphosphatase, putative; structural genomics,
center for structural genomics of infec diseases, csgid;
1.85A {Toxoplasma gondii}
Length = 347
Score = 269 bits (691), Expect = 2e-90
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 20/219 (9%)
Query: 3 HEADAHRTDLMTITRFV-----LNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLA 57
H H L++ K + + L+ I+ C + SA+ +
Sbjct: 5 HHHHHHENLYFQGMESPSALPSLDQLLKEQGADQTLTDLILAILDRCGKIASALQGTSV- 63
Query: 58 KLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYC 117
G N G+EQ +DV++ ++ SS + + +E+ E K G +
Sbjct: 64 ---DKVGSVNEFGDEQLTVDVIAENLLRSWAQSSEGSAVRAVCSEEDIHLQECHKNGEFI 120
Query: 118 VVFDPLDGSSNIDCGVSIGTIFGIYMMKD---SHEPTLDDVLQPGNNMLAAGYCMYGSSC 174
+ +DPLDGSS IDC ++G+I I+ + + + + G +A+ +YG
Sbjct: 121 LCWDPLDGSSIIDCNWAVGSIVSIWRIGHHGVQWQGADTLIQKTGRQQVASLIVVYGPRT 180
Query: 175 TLVLSTGSGVN-----GFTLDPSL---GEFILTHPDIKV 205
T V++ G LD + G+FI I
Sbjct: 181 TGVVAVNVDAGGIVKEGTALDLEMKDNGKFICRGKPIIK 219
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 45.6 bits (107), Expect = 7e-06
Identities = 45/320 (14%), Positives = 84/320 (26%), Gaps = 120/320 (37%)
Query: 6 DAHRTDLM---TITRFVLNEQSK---HPESRGDFSILLSHIVLGCKF------VCSAVNK 53
TD + T T L+ S E + LL L C+ V +
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKS----LLLK-YLDCRPQDLPREVLT---- 324
Query: 54 AGLAKLIGLAGET------------NVQGEEQKK-----LDVLSND----------VFVK 86
+ + + E+ +V ++ L+VL VF
Sbjct: 325 -TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383
Query: 87 -ALISSGRTCIL---VSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIY 142
A I + ++ V + D + + K V P + + +I IY
Sbjct: 384 SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS--LVEKQPKESTI---------SIPSIY 432
Query: 143 M---MKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLG---EF 196
+ +K +E L + + Y + + + +
Sbjct: 433 LELKVKLENEYAL-------HRSIVDHYNIPKTFDS---------DDLIPPYLDQYFYSH 476
Query: 197 ILTHPDIKVCLISQMQEHFEKINLS--------------------------------SYI 224
I H +K + F + L YI
Sbjct: 477 IGHH--LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 225 FDSLRIYKLQIPSLLRFQRK 244
D+ Y+ + ++L F K
Sbjct: 535 CDNDPKYERLVNAILDFLPK 554
Score = 37.1 bits (85), Expect = 0.005
Identities = 49/268 (18%), Positives = 88/268 (32%), Gaps = 53/268 (19%)
Query: 11 DLMTITRFVLNE-------QSKHPESRGD--FSILLS---HIVLGCKFVCSAVNK--AGL 56
D+ + + +L++ SK S F LLS +V KFV + L
Sbjct: 37 DVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ--KFVEEVLRINYKFL 94
Query: 57 AKLIGLAGETNVQGEEQK----KLDVLSND--VFVKALISSG------RTCILVSEEDEE 104
I E + + D L ND VF K +S R L+ +
Sbjct: 95 MSPI--KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA-LLELRPAK 151
Query: 105 AIFVEPSK-RGRYCVVFDPLDGSSNIDCGVSIGTIFGIYMMKDSHEPTLDDVLQPGNNML 163
+ ++ G+ V D S + C + F I+ + + + + VL+ +L
Sbjct: 152 NVLIDGVLGSGKTWVALDVCL-SYKVQCKMD----FKIFWLNLKNCNSPETVLEMLQKLL 206
Query: 164 AAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHPDIKVCLI-------SQMQEHFE 216
+ S + ++ ++ L L + CL+ ++ F
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIH--SIQAELRRL-LKSKPYENCLLVLLNVQNAKAWNAFN 263
Query: 217 ---KINLSS---YIFDSLRIYKLQIPSL 238
KI L++ + D L SL
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISL 291
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.3 bits (78), Expect = 0.037
Identities = 46/267 (17%), Positives = 90/267 (33%), Gaps = 71/267 (26%)
Query: 2 DHEADAHRTDLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVC--SAVNKAGLAKL 59
+A+ T + I ++ ++P + D LLS I + C + + AKL
Sbjct: 202 TLDAEKVFTQGLNILEWL-----ENPSNTPDKDYLLS-IPISCPLIGVIQLAHYVVTAKL 255
Query: 60 IGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKR------ 113
+G GE + L + + L+++ + ++E D F ++
Sbjct: 256 LGFT-----PGELRSYLKGAT--GHSQGLVTA----VAIAETDSWESFFVSVRKAITVLF 304
Query: 114 --GRYC------VVFDPLDGSSNIDCGVSIGTIFGIYMM--KDSHEPTLDDVLQPGNNML 163
G C P +++ + + M+ + + + D + N+ L
Sbjct: 305 FIGVRCYEAYPNTSLPPSILEDSLENNEGVPS----PMLSISNLTQEQVQDYVNKTNSHL 360
Query: 164 AAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILT-HPDIKVCLISQMQEHFEKINLSS 222
AG + + L VNG +++ P L + K S
Sbjct: 361 PAGKQVE-----ISL-----VNGAK------NLVVSGPP---QSLYG-LNLTLRKAKAPS 400
Query: 223 YIFDSLRIYKLQIPSLLRF-QRKERFT 248
+ D R IP F +RK +F+
Sbjct: 401 GL-DQSR-----IP----FSERKLKFS 417
Score = 33.9 bits (77), Expect = 0.055
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 13/44 (29%)
Query: 184 VNGFTLDPSLGEFILTHPDIKVCLI---------SQMQEHFEKI 218
++ ++ P L+H ++ L+ SQ+QE F KI
Sbjct: 1 MDAYSTRP----LTLSHGSLEHVLLVPTASFFIASQLQEQFNKI 40
Score = 29.6 bits (66), Expect = 1.1
Identities = 39/230 (16%), Positives = 73/230 (31%), Gaps = 78/230 (33%)
Query: 8 HRTDLMTITRFVLNEQSKHP----ESRGDFSILLSH--IVLGCKFVCSAVNKAGL----- 56
L++ T+F Q P + F L S I F AG
Sbjct: 1721 SEKGLLSATQFT---Q---PALTLMEKAAFEDLKSKGLIPADATF-------AGHSLGEY 1767
Query: 57 -AKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGR 115
A L LA V+S +++L+ +V RG
Sbjct: 1768 AA-LASLAD-------------VMS----IESLVE------VVF------------YRGM 1791
Query: 116 YCVVFDPLD--GSSNID-CGVSIGTIFGIYMMKDSHEPTLDDVLQPGNNML-AAGY-CMY 170
V P D G SN ++ G + +++ + ++ V + ++ Y
Sbjct: 1792 TMQVAVPRDELGRSNYGMIAINPGRV-AASFSQEALQYVVERVGKRTGWLVEIVNYNV-- 1848
Query: 171 GSSCTLVLSTGSGVNGFTLDPSLGEFILTHPDIKVCLISQMQE--HFEKI 218
+ V + G LD ++ +L ++ I ++Q+ E++
Sbjct: 1849 -ENQQYVAA-GDLRA---LD-TVTN-VLNFIKLQKIDIIELQKSLSLEEV 1891
>3b8b_A CYSQ, sulfite synthesis pathway protein;
3'-phosphoadenosine-5'-phosphosulfate (PAPS)
3'-phosphatase, structural genomics; HET: MSE; 1.70A
{Bacteroides thetaiotaomicron vpi-5482}
Length = 292
Score = 31.5 bits (72), Expect = 0.20
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 77 DVLSNDVFVKALISSGRTCI-LVSEEDEEAIFVEPSKRGRYCVVFDPLDG 125
D +++ V L + ++SEE + + +V DPLDG
Sbjct: 64 DRKAHEAIVAILNETP---FPVLSEEGKHMDYAVRRGWDTLWIV-DPLDG 109
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine,
glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis
orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5
c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A*
2vzu_A*
Length = 1032
Score = 29.6 bits (66), Expect = 1.2
Identities = 8/59 (13%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 107 FVEPSKRGRYCVVFDPLDGSSNIDC-GVSIGTIFGIYMMKDSHEPTLDDVLQPGNNMLA 164
R + F + +++ G + T + H+ + + G N +A
Sbjct: 127 LNVDDTSSRTYLDFSGVLSKADVWVNGTKVATKDQVNGAYTRHDLDITAQVHTGVNSVA 185
>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp}
SCOP: d.108.1.1
Length = 159
Score = 28.2 bits (63), Expect = 1.5
Identities = 6/56 (10%), Positives = 16/56 (28%), Gaps = 3/56 (5%)
Query: 69 QGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAI---FVEPSKRGRYCVVFD 121
+ KL + + + + I + E + + I + S +
Sbjct: 40 SNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNIEL 95
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus
sphaericus} SCOP: c.2.1.7 c.58.1.1
Length = 364
Score = 27.9 bits (63), Expect = 2.9
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 43 GCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFV 85
G K V + VNKA ++ + G V + D+F
Sbjct: 196 GAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTC---DIFA 235
>1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product complex, sugar
nucleotidase fold, hydrolase; HET: AMP; 1.69A {Rattus
norvegicus} SCOP: e.7.1.1 PDB: 2wef_A*
Length = 308
Score = 27.8 bits (62), Expect = 3.3
Identities = 31/183 (16%), Positives = 51/183 (27%), Gaps = 24/183 (13%)
Query: 50 AVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVE 109
V + + L + + GEE + ++ S+
Sbjct: 53 MVQMSICSSLSRKFPKLTIIGEEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAI----- 107
Query: 110 PSKRGRYCVVFDPLDGSSNIDCG------VSIGTIFGIYMMKDSHEPTLDDVLQPGNNML 163
K V DP+DG+ G V IG + + + QP N
Sbjct: 108 --KEEDLVVWVDPVDGTKEYTEGLLDNVTVLIGIAYE-------GKAIAGIINQPYYNYQ 158
Query: 164 AAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILT---HPDIKVC-LISQMQEHFEKIN 219
A + G + VL G+ P+ I T H + V I+ M
Sbjct: 159 AGPDAVLGRTIWGVLGLGAFGFQLKEAPAGKHIITTTRSHSNKLVTDCIAAMNPDNVLRV 218
Query: 220 LSS 222
+
Sbjct: 219 GGA 221
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor,
lyase; HET: TD3; 1.80A {Helicobacter pylori} PDB:
3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Length = 307
Score = 26.8 bits (60), Expect = 6.4
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 128 NIDC-GVSIGTIFGIYMMKDSHEPTLD-DVLQ 157
+D +IGT G + K EP LD + LQ
Sbjct: 168 QVDYLAPAIGTSHGAF--KFKGEPKLDFERLQ 197
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II
fructose-1,6-bisphosphate aldolase, glycolytic pathway,
giardia lamblia, drug target; HET: PGH; 1.75A {Giardia
intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A*
3gb6_A*
Length = 323
Score = 26.5 bits (59), Expect = 8.7
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 128 NIDC-GVSIGTIFGIYMMKDSHEPTLD-DVLQ 157
+D V+IGT G Y K + L D ++
Sbjct: 166 GVDALAVAIGTSHGAYKFKSESDIRLAIDRVK 197
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase,
metal-depdendent aldolase, lyase; 2.00A {Thermus
aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Length = 305
Score = 26.5 bits (59), Expect = 8.8
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 128 NIDC-GVSIGTIFGIYMMKDSHEPTLD-DVLQ 157
D V+IGT G Y K P +D L+
Sbjct: 166 GADYLAVAIGTSHGAY--KGKGRPFIDHARLE 195
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.138 0.404
Gapped
Lambda K H
0.267 0.0754 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,741,635
Number of extensions: 218801
Number of successful extensions: 488
Number of sequences better than 10.0: 1
Number of HSP's gapped: 476
Number of HSP's successfully gapped: 23
Length of query: 249
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 158
Effective length of database: 4,160,982
Effective search space: 657435156
Effective search space used: 657435156
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (25.3 bits)