Your job contains 1 sequence.
>025727
MENLGEDYQQEYQNYWETKMFLQNEEFDTWPLDEAFSGYYDSSSPDGAASSAASKNIVSE
RNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSK
KNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKR
TDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFSLFFSTYHHQLFLFKPK
KGQKFYPIS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025727
(249 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 508 1.1e-48 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 212 2.1e-42 3
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 217 7.5e-18 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 219 3.8e-17 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 178 1.0e-16 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 212 2.3e-16 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 199 8.7e-16 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 170 1.3e-15 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 199 4.6e-15 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 200 5.0e-15 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 197 9.5e-15 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 191 1.2e-14 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 193 1.4e-14 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 191 3.0e-14 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 193 3.4e-14 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 177 1.3e-13 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 185 1.7e-13 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 179 2.8e-13 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 170 4.0e-13 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 176 9.5e-13 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 170 7.9e-12 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 145 1.1e-10 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 164 1.2e-10 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 147 1.2e-10 2
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 148 1.5e-10 2
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 165 3.0e-10 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 164 3.5e-10 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 161 3.6e-10 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 162 3.9e-10 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 120 1.1e-09 2
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 159 2.4e-09 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 157 3.0e-09 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 116 5.5e-09 2
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 152 1.1e-08 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 146 1.8e-08 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 129 2.6e-08 2
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 146 2.8e-08 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 146 7.4e-08 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 143 1.1e-07 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 139 2.2e-07 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 137 5.6e-07 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 140 6.6e-07 1
UNIPROTKB|Q7XVB7 - symbol:OSJNBa0072D21.7 "OSJNBa0072D21.... 92 7.8e-07 3
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 136 1.0e-06 1
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 134 1.0e-06 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 114 1.4e-06 2
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 130 2.3e-06 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 111 3.2e-06 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 132 3.5e-06 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 129 3.6e-06 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 105 4.0e-06 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 132 4.4e-06 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 113 6.9e-06 2
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 103 7.0e-06 2
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 129 8.3e-06 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 121 8.5e-06 2
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 121 1.1e-05 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 126 1.1e-05 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 118 1.1e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 125 1.2e-05 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 127 1.2e-05 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 127 1.4e-05 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 126 1.6e-05 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 109 1.9e-05 2
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 125 2.3e-05 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 108 2.3e-05 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 125 2.9e-05 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 122 3.8e-05 1
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 105 3.8e-05 2
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 104 3.9e-05 2
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 113 4.9e-05 2
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 115 5.3e-05 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 122 5.5e-05 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 121 5.8e-05 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 121 6.0e-05 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 119 6.1e-05 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 121 6.9e-05 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 120 7.3e-05 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 102 7.4e-05 2
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 120 8.6e-05 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 120 0.00012 1
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 101 0.00014 2
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 110 0.00020 1
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 114 0.00020 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 107 0.00036 2
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 115 0.00037 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 112 0.00040 1
TAIR|locus:2031978 - symbol:AT1G05710 species:3702 "Arabi... 105 0.00043 1
RGD|3092 - symbol:Mitf "microphthalmia-associated transcr... 92 0.00044 1
UNIPROTKB|O88368 - symbol:Mitf "Microphthalmia-associated... 92 0.00044 1
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 115 0.00049 1
TAIR|locus:2158392 - symbol:BHLH92 "AT5G43650" species:37... 109 0.00054 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 101 0.00056 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 111 0.00057 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 111 0.00064 2
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 97 0.00071 2
UNIPROTKB|Q8LII5 - symbol:OJ1167_G06.116 "Putative unchar... 88 0.00072 2
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 105 0.00074 1
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 109 0.00081 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 88 0.00082 2
WARNING: Descriptions of 3 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 109/225 (48%), Positives = 144/225 (64%)
Query: 6 EDYQQEYQNYWETKMFLQNEE--FDTWPLDEAFSGYYDXXXXXXXXXX-XXXKNIVSERN 62
ED EY+NYWET MF QN+E FD+WP++EAFSG + KN+VSERN
Sbjct: 2 EDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERN 61
Query: 63 RRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKK- 121
RR+KLN+RLFALRSVVPNISK+DKAS+IKD+IDY+QEL +QEK + EI ELES +
Sbjct: 62 RRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLE 121
Query: 122 --------NFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
NF Q+ + KK + S + P+E+LE++V MGEK +VV
Sbjct: 122 NPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVV 181
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
+TCSK+ +TMV+LC+ ESL L I+T N ++ RL T F++V
Sbjct: 182 CITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQV 226
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 212 (79.7 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 42/62 (67%), Positives = 54/62 (87%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KNI+ ER+RR+KLNE+L+ALRSVVPNI+KMDKASIIKDAI+YIQ L +E+++ E+ L
Sbjct: 93 KNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVAAL 152
Query: 115 ES 116
ES
Sbjct: 153 ES 154
Score = 206 (77.6 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 40/71 (56%), Positives = 54/71 (76%)
Query: 148 SAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVA 207
+A + PVEI ELRV +G+++LVVSVTCSKR D M ++C A E L+L++ITANIT+VA
Sbjct: 209 AAAAPAPPVEIQELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVA 268
Query: 208 GRLLKTAFIEV 218
G + T F+EV
Sbjct: 269 GCPMHTLFVEV 279
Score = 58 (25.5 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 10 QEYQNYWETKMFLQNEEFDTWPLDEAFSGYYD 41
+ + YWET+ +L++EE D+ L Y+
Sbjct: 9 ESFAYYWETQRYLESEELDSMYLPTQDDSNYE 40
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 61/176 (34%), Positives = 98/176 (55%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KNI ER+RRK+LNE+LFALR+VVP I+KMDKASI++DAI +I++L E+E+++ DEI L
Sbjct: 97 KNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISVL 156
Query: 115 ESGKSKKNFGFDFEQELPVLLRPKKKKIDRF--FDSAGS--RTA---PVEILELRVKTMG 167
+S + + + V + P KK+ D G R A P++ILE+ K
Sbjct: 157 QSAAAVAATAVEDVDDSGVTM-PSMKKLRSTPPLDGGGGALRVASSPPLQILEVETKETE 215
Query: 168 EKI-LVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAF-IEVRFL 221
+ L++ + S +D +++ + E K ++ G + K +E +L
Sbjct: 216 DFYGLILQTSQSWPSDPQLQVSKVGE--KTVAVSIRCAKTRGAMAKVCHAVESLYL 269
Score = 142 (55.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 160 ELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
+L+V +GEK + VS+ C+K M K+C A ESL LK+++A++ AV G ++ T F+EV
Sbjct: 233 QLQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASVAAVDGTIVHTMFVEV 291
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 219 (82.2 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 54/160 (33%), Positives = 86/160 (53%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI--- 111
KN+++ER RRKKLN+RL+ALRS+VP I+K+D+ASI+ DAI+Y++EL + K ++DE+
Sbjct: 314 KNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEEN 373
Query: 112 MELESGKSKKNFGFDFEQELPVLLRP------KKKKIDRFFDSAGSRTAPVEIL-ELRVK 164
E E G ++ G + P + + D S E+ ++ V
Sbjct: 374 SETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVA 433
Query: 165 TMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANIT 204
+ + V V C + +L EA +SL L++ AN T
Sbjct: 434 QLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTT 473
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 178 (67.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI 111
KN+ +ER RRKKLN L+ LRS+VPNI+KMD+ASI+ DAIDYI L +Q K ++DE+
Sbjct: 285 KNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDEL 341
Score = 60 (26.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 150 GSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGR 209
G R P LE+R + G + L V V + V+L +A +L L++I N+T
Sbjct: 411 GHRMEPQ--LEVR-QVQGNE-LFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTL 466
Query: 210 LLKTAFIEVR 219
+L + VR
Sbjct: 467 VLNVFRVMVR 476
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 212 (79.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 58/173 (33%), Positives = 100/173 (57%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELH---EQEKRIRDEIM 112
++ +ER RR+KLN+R ++LR+VVPN+SKMDKAS++ DAI YI EL +Q + ++EI
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQ 475
Query: 113 ELESGKSKK-NFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKIL 171
+ G SK+ N G R K++K +A S +E +E+ VK +G ++
Sbjct: 476 KKLDGMSKEGNNGKGCGS------RAKERKSSNQDSTASS----IE-MEIDVKIIGWDVM 524
Query: 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFS 224
+ V C K+ + EA + L L++ A+++ V +++ A +++ FF+
Sbjct: 525 I-RVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQFFN 576
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 199 (75.1 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 50/152 (32%), Positives = 91/152 (59%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
+ ++SER RR ++ ++L+ALRS+VPNI+KMDKASI+ DA+ Y+QEL Q K+++ +I L
Sbjct: 131 RTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGL 190
Query: 115 ESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVS 174
E+ S + G +++ P +K + R + S+ +I+++ V + EK V
Sbjct: 191 EA--SLNSTG-GYQEHAP---DAQKTQPFRGINPPASK----KIIQMDVIQVEEKGFYVR 240
Query: 175 VTCSKRTDTMVKLCEAFESL-KLKIITANITA 205
+ C+K L ++ ESL ++ +N+++
Sbjct: 241 LVCNKGEGVAPSLYKSLESLTSFQVQNSNLSS 272
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 170 (64.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE 110
++ +ER RR+KLN+R +ALRSVVPNISKMDKAS++ DA+ YI ELH + K + E
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAE 488
Score = 72 (30.4 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 135 LRPKKKKIDRFFDSAG-SRTAPVEI-LELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFE 192
L K K ++ + G S P+ + ++ V+T GE + V + C + ++ AFE
Sbjct: 478 LHAKLKVMEAERERLGYSSNPPISLDSDINVQTSGEDV-TVRINCPLESHPASRIFHAFE 536
Query: 193 SLKLKIITANITAVAGRLLKTAFIE 217
K+++I +N+ +L T ++
Sbjct: 537 ESKVEVINSNLEVSQDTVLHTFVVK 561
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 199 (75.1 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 53/155 (34%), Positives = 86/155 (55%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KN+++ER RRKKLN+RL+ LRSVVP ISKMD+ASI+ DAI+Y++EL ++ +++E+
Sbjct: 336 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELESS 395
Query: 115 ESGKSKKNFGFDFEQELPVL-LRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
+ S F P L P + K + + S T +E+R++ G + +
Sbjct: 396 PATSSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQPRVEVRLRE-GRAVNI- 453
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAG 208
+ C++R ++ A E L L + A I+ G
Sbjct: 454 HMFCARRPGLLLSAMRAVEGLGLDVQQAVISCFNG 488
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 200 (75.5 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 57/170 (33%), Positives = 95/170 (55%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++ +ER RR+KLN+R +ALR+VVPN+SKMDKAS++ DAI YI EL + ++++ E
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL-------KSKVVKTE 505
Query: 116 SGKSK-KNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVS 174
S K + KN E+ L K S+ S PV +E+ VK +G ++
Sbjct: 506 SEKLQIKN---QLEEVKLELAGRKASASGGDMSSSCSSIKPVG-MEIEVKIIGWDAMI-R 560
Query: 175 VTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFS 224
V SKR +L A L+L++ A+++ V +++ A +++ F ++
Sbjct: 561 VESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYT 610
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 197 (74.4 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 55/169 (32%), Positives = 94/169 (55%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++ +ER RR+KLN+R ++LR+VVPN+SKMDKAS++ DAI YI EL + ++ + E
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISEL-------KSKLQKAE 469
Query: 116 SGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSV 175
S K + D + + K DR + S +E +E+ VK +G ++ +
Sbjct: 470 SDKEELQKQIDVMNKEAGNAKSSVK--DRKCLNQESSVL-IE-MEVDVKIIGWDAMI-RI 524
Query: 176 TCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFS 224
CSKR K EA + L L++ A+++ V +++ A +++ FF+
Sbjct: 525 QCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFFT 573
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 191 (72.3 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 45/95 (47%), Positives = 63/95 (66%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KN+++ER RRK+LN+RL LRS+VP ISKMD+ SI+ DAIDY++EL ++ +++DE EL
Sbjct: 178 KNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQEL 237
Query: 115 -ESGKS--KKNFGF--DFEQELPVLLRPKKKKIDR 144
S S K FG D P++ K +IDR
Sbjct: 238 GNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDR 272
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 193 (73.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 44/150 (29%), Positives = 83/150 (55%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KN+ SER RR+++N+ ++ LR+VVP I+K++K I DA+DYI EL +++++ DE+ +
Sbjct: 264 KNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGI 323
Query: 115 ESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVS 174
+ K+ +E + P+ +++ + R E+ ++ V GE+ ++
Sbjct: 324 NEMECKEIAA----EEQSAIADPEAERVS---SKSNKRVKKNEV-KIEVHETGERDFLIR 375
Query: 175 VTCSKRTDTMVKLCEAFESLKLKIITANIT 204
V + D +L EA + +L+II N T
Sbjct: 376 VVQEHKQDGFKRLIEAVDLCELEIIDVNFT 405
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 191 (72.3 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 54/157 (34%), Positives = 86/157 (54%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KN+++ER RRKKLN+RL+ LRSVVP ISKMD+ASI+ DAIDY++EL ++ + +E+
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 366
Query: 115 ESGK-SKKNFGFDFEQELPVLL--RPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKIL 171
G + F P L R K++ S + A VE+ R++ G +
Sbjct: 367 PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEV---RLRE-GRAVN 422
Query: 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAG 208
+ + C +R ++ +A ++L L + A I+ G
Sbjct: 423 I-HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 458
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 193 (73.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 50/169 (29%), Positives = 87/169 (51%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++ +ER RR+KLN+R +ALR+VVPN+SKMDKAS++ DAI YI EL R ++ LE
Sbjct: 525 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINEL-------RGKLTALE 577
Query: 116 SGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSV 175
+ K + ++ L + + + G A +E+ K +G + ++ V
Sbjct: 578 TDKET------LQSQMESLKKERDARPPAPSGGGGDGGARCHAVEIEAKILGLEAMI-RV 630
Query: 176 TCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFS 224
C KR +L A L L + A+++ V +++ +++ +S
Sbjct: 631 QCHKRNHPAARLMTALRELDLDVYHASVSVVKDLMIQQVAVKMASRVYS 679
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 53/166 (31%), Positives = 86/166 (51%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
N+ +ER RR+KL+ RL ALRS VP ++ M KASI++DAI YI EL K + + E+E
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEME 92
Query: 116 SGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSV 175
+ D EQ P +++P+ + D + + E ++L K +GE+ + +
Sbjct: 93 EAPPE----IDEEQTDP-MIKPEVETSD--LNEEMKKLGIEENVQL-CK-IGERKFWLKI 143
Query: 176 TCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL 221
KR K E L +II ++T G +L +A ++ + L
Sbjct: 144 ITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQTQEL 189
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 185 (70.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 37/67 (55%), Positives = 51/67 (76%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++ +ER RR+KLN+R +ALRSVVPNISKMDKAS++ DAI YI+EL E+ K + DE + +
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTD 455
Query: 116 SGKSKKN 122
S+ N
Sbjct: 456 KSLSESN 462
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 179 (68.1 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 45/151 (29%), Positives = 78/151 (51%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME- 113
++I++ER RR+KL++R AL +VP + KMDKAS++ DAI Y+++L +Q K + +E
Sbjct: 181 EHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRR 240
Query: 114 -LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILV 172
+E+ K + + D FD G TA + +E RV E+ ++
Sbjct: 241 PVEAAVLVKKSQLSADDD-------DGSSCDENFDG-GEATAGLPEIEARVS---ERTVL 289
Query: 173 VSVTCSKRTDTMVKLCEAFESLKLKIITANI 203
V + C R ++ E++ L I+ N+
Sbjct: 290 VKIHCENRKGALITALSEVETIGLTIMNTNV 320
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 170 (64.9 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 32/62 (51%), Positives = 50/62 (80%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KN+++ER RRK+LN+RL LRS+VP I+KMD+ SI+ DAIDY++EL ++ +++++ EL
Sbjct: 151 KNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQEL 210
Query: 115 ES 116
S
Sbjct: 211 GS 212
Score = 36 (17.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 173 VSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
+ + C + +V E+L L+I I+ + L+ + EV
Sbjct: 243 IDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEV 288
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 176 (67.0 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 45/108 (41%), Positives = 66/108 (61%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI--- 111
KN+++ER RRK+LN+RL LRS+VP ISKMD+ SI+ D IDY++EL E+ K + +EI
Sbjct: 182 KNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIGVT 241
Query: 112 -MELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEI 158
EL+ + K+ E+ L+R K D ++ GS +EI
Sbjct: 242 PEELDLLNTMKDSSSGNNNEM--LVR-NSTKFD--VENRGSGNTRIEI 284
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 170 (64.9 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 45/149 (30%), Positives = 77/149 (51%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
+I++ER RR+KL +R AL +++P + KMDKAS++ DAI +I+ L E K E E
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVK-------EYE 179
Query: 116 SGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEIL-ELRVKTMGEKILVVS 174
K +K + L+ + + S G+R + L E+ V+ G+ +L+
Sbjct: 180 EQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLI-K 238
Query: 175 VTCSKRTDTMVKLCEAFESLKLKIITANI 203
+ C K+ ++K+ E L L I +N+
Sbjct: 239 ILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 145 (56.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 25/56 (44%), Positives = 42/56 (75%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE 110
+++V+ER RR+K+N+R L +V+P + KMDKA+I+ DA YI+EL E+ K + ++
Sbjct: 130 EHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQ 185
Score = 56 (24.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 155 PVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANI 203
P EI E+R +++V + C +V++ E + L+II AN+
Sbjct: 210 PPEI-EVRCSPTNN-VVMVRIHCENGEGVIVRILAEVEEIHLRIINANV 256
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 164 (62.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 39/153 (25%), Positives = 85/153 (55%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE-IME 113
+++++ER RR+KLNERL AL +++P + K DKA++++DAI ++++L E+ K++ +E ++
Sbjct: 132 EHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVT 191
Query: 114 LESGKS----KKNFGF-DFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGE 168
+ +S K++ + D + + D + ++E RV +
Sbjct: 192 KKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVS---D 248
Query: 169 KILVVSVTCSKRTDTMVKLCEAFESLKLKIITA 201
+ L++ V C K M+K+ + E +L+++ +
Sbjct: 249 RDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNS 281
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 147 (56.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 55 KN-IVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
KN ++SER RR+KLNE L+S+VP+I K+DKASI+ + I Y++EL E+R++ E
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKEL---ERRVQ----E 239
Query: 114 LESGK 118
LESGK
Sbjct: 240 LESGK 244
Score = 57 (25.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 160 ELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRL 210
++RV M + L + V C + M ++ +A +SL+L +++ +A G L
Sbjct: 290 DVRVIVMDKDELHLEVQCRWKELMMTRVFDAIKSLRLDVVSVQASAPDGLL 340
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 148 (57.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/55 (45%), Positives = 42/55 (76%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE 110
+I++ER RR+K+N+R L +V+P + KMDKA+I+ DA+ Y++EL E+ K + +E
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEE 222
Score = 53 (23.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 16/72 (22%), Positives = 30/72 (41%)
Query: 132 PVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAF 191
P + +K +AG + E+ V+ E+ ++V V C +V+L
Sbjct: 228 PAAMVVRKSSCSGRQSAAGDGDGEGRVPEIEVRVW-ERSVLVRVQCGNSRGLLVRLLSEV 286
Query: 192 ESLKLKIITANI 203
E L+L I ++
Sbjct: 287 EELRLGITHTSV 298
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 165 (63.1 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 54/168 (32%), Positives = 93/168 (55%)
Query: 55 KN-IVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
KN ++SER RR+KLNE L+S+VP+I K+DKASI+++ I Y++ L EKR+++ +E
Sbjct: 391 KNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVL---EKRVKE--LE 445
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
S S + +Q + K+ + S G A E + V T+ +K++++
Sbjct: 446 SSSEPSHQRATETGQQRRCEITG--KELVSEIGVSGGG-DAGREHHHVNV-TVTDKVVLL 501
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRL-LKTAFIEVRF 220
V C + M ++ +A +SL L +++ +A G L LK I+ +F
Sbjct: 502 EVQCRWKELVMTRVFDAIKSLCLDVLSVQASAPDGLLGLK---IQAKF 546
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 164 (62.8 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 49/163 (30%), Positives = 88/163 (53%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++ +ER RR+KLN R +ALR+VVPN+SKMDK S+++DA+ YI EL + + + ELE
Sbjct: 344 HVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENV-----ELE 398
Query: 116 SGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSV 175
K F+ +E+ R + ++ + A E++++ VK M +V V
Sbjct: 399 --KHAIEIQFNELKEIAGQ-RNAIPSVCKYEEKAS------EMMKIEVKIMESDDAMVRV 449
Query: 176 TCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
K +L A L+L++ A+I+ + +++ A +++
Sbjct: 450 ESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKM 492
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 161 (61.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 44/152 (28%), Positives = 80/152 (52%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
+I++ER RR+KL +R AL ++VP + KMDKAS++ DA+ +I+ L E+ + ELE
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQER-------VGELE 205
Query: 116 SGKSKKNFGFDFEQELPVLLRPKKKKID----RFFDSAGSRTAPVEILELRVKTMGEKIL 171
K ++ E VL++ K +D F S + +++ E+ V+ E +L
Sbjct: 206 EQKKERRL------ESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVL 259
Query: 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANI 203
+ + C K+ + K+ E L + I +++
Sbjct: 260 I-KILCEKQKGHLAKIMAEIEKLHILITNSSV 290
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 162 (62.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KN+++ER RRK+LN+RL LRSVVP ISKMD+ SI+ D I Y++EL ++ K ++ E
Sbjct: 196 KNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAATG 255
Query: 115 ESGKS 119
+S S
Sbjct: 256 DSSSS 260
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 120 (47.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRD 109
+ER RR+++N L LRS++PN +K DKAS++ + I +++EL Q +I D
Sbjct: 139 AERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITD 189
Score = 81 (33.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 167 GEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFI 216
G ++ S C RTD M + A +SL+L+ + A I V GR+ F+
Sbjct: 211 GNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFL 260
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 159 (61.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 41/146 (28%), Positives = 80/146 (54%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRD--EIMELE 115
+SE+ RR+KLNER LRS++P+ISK+DK SI+ D I+Y+Q+L ++ + + E + E
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 116 SGKS--KKNFGFDFEQELPV-LLRPKKKKID-RFFDSAGSRTAPVEILE-LRVKTMGEKI 170
+ + K+ D E+ + K+K D + + + + LR+ ++G ++
Sbjct: 468 TRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGNEV 527
Query: 171 LVVSVTCSKRTDTMVKLCEAFESLKL 196
V+ + C+ R ++++ + L L
Sbjct: 528 -VIELRCAWREGILLEIMDVISDLNL 552
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 157 (60.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++ +ER RR+KLN+R +ALR+VVPNISKMDKAS++ DAI YI ++ +K+IR + E E
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDM---QKKIR--VYETE 375
Query: 116 SGKSKK 121
K+
Sbjct: 376 KQIMKR 381
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 116 (45.9 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGK 118
+ER RR+++N L LRS++PN +K DKAS++ + I +++EL ++E + E + +
Sbjct: 181 AERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKEL-KRETSVISETNLVPTES 239
Query: 119 SKKNFGFDFEQE 130
+ F E+E
Sbjct: 240 DELTVAFTEEEE 251
Score = 80 (33.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 167 GEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFI 216
G ++ S+ C R+D + + + ++++LK + A IT V GR+ F+
Sbjct: 255 GRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFV 304
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 152 (58.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++ +E+ RR+KLN R +ALR++VP +S+MDKAS++ DA+ YI+ L + + EI +++
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMK 309
Query: 116 SGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSV 175
++ K D ++ + S++ LE++VK +GE+ ++
Sbjct: 310 MTETDK---LDNSSS-----NTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQ 361
Query: 176 TCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
T + T L A + ++ AN + ++ +++ + V
Sbjct: 362 TENVNHPTSA-LMSALMEMDCRVQHANASRLSQVMVQDVVVLV 403
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE 110
++ +ER RR+KLN R LR+ VP +S+MDKAS++ DA+DYI EL + +R+ E
Sbjct: 95 HVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAE 149
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 129 (50.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/61 (44%), Positives = 43/61 (70%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
KN+ +ER RR +LN +FALR+VVP I+KM K + + DAI++I K +++E++EL
Sbjct: 65 KNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHI-------KNLQNEVLEL 117
Query: 115 E 115
+
Sbjct: 118 Q 118
Score = 48 (22.0 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 160 ELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVR 219
++ + ++G + + +KR K+ EA S K+++++ N + G IEV+
Sbjct: 152 QVELISLGSSKYNLKIFWTKRAGLFTKVLEALCSYKVQVLSLNTISFYGYAESFFTIEVK 211
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 146 (56.5 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 42/147 (28%), Positives = 77/147 (52%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE---I 111
+++++ER RR+KL+E+ AL +++P + K DK +I+ DAI +++L EQ + +++E
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEAT 178
Query: 112 MELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKIL 171
++ES K F++E P L I+ FD A + E+ K IL
Sbjct: 179 RQMESMILVKKSKVFFDEE-PNLSCSPSVHIE--FDQA--------LPEIEAKISQNDIL 227
Query: 172 VVSVTCSKRTDTMVKLCEAFESLKLKI 198
+ + C K M+ + E+ +L+I
Sbjct: 228 I-RILCEKSKGCMINILNTIENFQLRI 253
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 146 (56.5 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 47/163 (28%), Positives = 82/163 (50%)
Query: 55 KN-IVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI-- 111
KN ++SER RR+KL E L+SVVP+I K+DKASI+ + I Y++EL ++ + +
Sbjct: 243 KNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQP 302
Query: 112 ----MELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMG 167
ME + K+ G +++ R K+K D+ G R V + V M
Sbjct: 303 SPRPMETTRRRCCKSTG----KKVSAGARAKRKA-PAPEDTDGERRHCVS--NVNVTIMD 355
Query: 168 EKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRL 210
K L++ + C + M ++ +A + + L +++ + G L
Sbjct: 356 NKELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLL 398
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 143 (55.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/158 (25%), Positives = 76/158 (48%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGK 118
+ER RR+++N L LRS++PN +K DKAS++ + I++++EL Q I +
Sbjct: 113 AERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIA------AAAA 166
Query: 119 SKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCS 178
+ G D + + V+ R + + + A ++ V G+ ++ S+ C
Sbjct: 167 AGDYHGNDEDDDDAVVGR-RSAAAQQLLPTEADELA----VDAAVDAEGKLVVRASLCCE 221
Query: 179 KRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFI 216
R D + + A +L+L+ A IT + GR+ I
Sbjct: 222 DRPDLIPDIARALAALRLRARRAEITTLGGRVRSVLLI 259
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 139 (54.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 43/165 (26%), Positives = 78/165 (47%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRRK++NE L LRS++P+ + D+ASI+ AI+Y++EL + + +
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTR 176
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
K K + D S ++P EI E+ T+ E +
Sbjct: 177 THDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEI-EV---TVAESHANI 232
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
+ K+ ++KL + +SL+L ++ N+T + +L + + V
Sbjct: 233 KIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRV 277
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 137 (53.3 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
++I++ER RR+K+N+R L +V+P + KMDKA+I+ DA+ Y++E+ E+
Sbjct: 192 EHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEK 240
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 140 (54.3 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELES 116
V E+ RR+KLNER LR ++P+I+K+DK SI+ D I+Y+QEL E+R++ ELES
Sbjct: 444 VLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQEL---ERRVQ----ELES 495
>UNIPROTKB|Q7XVB7 [details] [associations]
symbol:OSJNBa0072D21.7 "OSJNBa0072D21.7 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG236355 EMBL:AL662977 ProteinModelPortal:Q7XVB7
Gramene:Q7XVB7 Uniprot:Q7XVB7
Length = 383
Score = 92 (37.4 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASII 90
K IVSER RR ++ E+L+ LR++VPNI+K+ +I
Sbjct: 134 KTIVSERKRRVRMKEKLYELRALVPNITKVRTQCLI 169
Score = 85 (35.0 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 27/104 (25%), Positives = 49/104 (47%)
Query: 83 KMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKK----NFGFDFEQELPVLLRPK 138
+MDKASII DA+ Y+++L +++++E+ LE + + + Q P +
Sbjct: 193 QMDKASIIADAVVYVKDLQAHARKLKEEVAALEEARPIRPPPPSAAAQRPQRQPRRVAAA 252
Query: 139 KKKIDRFFDSAGSRTA---P--VEILELRVKTMGEKILVVSVTC 177
++ R D+A TA P + + +GE V+V C
Sbjct: 253 AAQLARAADAAAVTTAAAAPHGARVAHVGAAQVGEGRFFVTVEC 296
Score = 36 (17.7 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 5 GEDYQQEYQNYWE 17
G+D QE+QN E
Sbjct: 75 GDDRMQEWQNNCE 87
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 136 (52.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 47/180 (26%), Positives = 86/180 (47%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHE--------QEK 105
+I ERNRRK++NE L LRS++P + + D+ASII AI++++EL + + +
Sbjct: 199 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 258
Query: 106 RIRDEI---MELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVE----I 158
RI E M + S Q P+++ +++ G R E +
Sbjct: 259 RILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELE---GGGGLREETAENKSCL 315
Query: 159 LELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
++ VK +G ++ + +R ++K A E L L I+ NIT + +L + +++
Sbjct: 316 ADVEVKLLGFDAMI-KILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKI 374
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 134 (52.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 50/170 (29%), Positives = 84/170 (49%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNI--SKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRRK++NE L LRS++P + D+ASI+ AI+Y++EL E ++ ME
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKEL---EHHLQS--ME 181
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRF-FDSAGSR---TAPVE-ILELRVKTMGE 168
+ ++ G +Q D F F +R A E + E+ V TM E
Sbjct: 182 PPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEV-TMVE 240
Query: 169 KILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
+ + KR ++KL + +SL+L ++ N+T +L + ++V
Sbjct: 241 SHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKV 290
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 114 (45.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/52 (38%), Positives = 37/52 (71%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE 110
+ER RR+++N L LRS++PN +K DKAS++ + I++++EL Q + ++
Sbjct: 128 AERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAMMED 179
Score = 58 (25.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 155 PVEILELRVKTM----GEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRL 210
P E EL V G + S+ C R D + + A +L+L+ A I + GR+
Sbjct: 195 PTEDDELEVDAAADEGGRLVARASLCCEDRADLIPGIARALAALRLRARRAEIATLGGRV 254
Query: 211 LKTAFI 216
I
Sbjct: 255 RSVLLI 260
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 130 (50.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++ +ER RR+KLN R LR+ VP +S+MDKAS++ DA YI EL + R+ + +
Sbjct: 112 HVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLESDARQAA 171
Query: 116 SGK 118
+ +
Sbjct: 172 AAR 174
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 111 (44.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
+ ++ER RR N+R F L++++PN +K +ASI++D I YI EL ++ + +
Sbjct: 23 RTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELKYLVEKK 82
Query: 115 ESGKSKKNFGFD 126
+ G N D
Sbjct: 83 KCGARHNNIEVD 94
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 132 (51.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 39/174 (22%), Positives = 78/174 (44%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
+++++ER RR+KL ++ AL ++VP + K DK S++ IDY+++L E+ K + E
Sbjct: 287 EHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKALE----EG 342
Query: 115 ESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVS 174
++ F+ + + V D + S ++P +E + G +L+
Sbjct: 343 SRRTAEPTTAFESKCRITVDDDDGGSASSGTDDGSSSSSSPT--VEASIH--GNTVLL-K 397
Query: 175 VTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFSLFFS 228
+ C +R +V + E L II ++ L L +++S
Sbjct: 398 ICCKERRGLLVMILSELEKQGLSIINTSVVPFTDSCLNITITAKARLALPVYYS 451
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 129 (50.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 23/46 (50%), Positives = 38/46 (82%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SE+ RR ++NE++ AL+S++PN SK DKAS++ DAI+Y+++L Q
Sbjct: 39 LSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQ 84
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 105 (42.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQEL 100
+I ERNRR+++N+ L LRS+ P I + D+ASII AID+I+EL
Sbjct: 3 HIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKEL 49
Score = 57 (25.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 139 KKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKI 198
K+++ + A +P+ +E R+ G +L+ T S+R V++ ESL L++
Sbjct: 120 KQQLQLVAELAACCNSPMADVEARIS--GANVLLR--TLSRRAPP-VRIIALLESLHLEV 174
Query: 199 ITANITAVAGRLLKTAFIEV 218
+ NIT + +L + +++
Sbjct: 175 LHLNITTMDDTVLYSFVLKI 194
Score = 37 (18.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 133 VLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKIL 171
VLLR ++ A + +E+L L + TM + +L
Sbjct: 149 VLLRTLSRRAPPVRIIALLESLHLEVLHLNITTMDDTVL 187
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 132 (51.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 25/65 (38%), Positives = 43/65 (66%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++V+ER RR+KLNE+ LRS+VP ++KMDK SI+ D I Y+ L ++ + + E +
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423
Query: 116 SGKSK 120
+++
Sbjct: 424 HKRTR 428
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 113 (44.8 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 56 NIVSERNRRKKLNERLFALRSVVP--NISKMDKASIIKDAIDYIQELHE 102
+I ERNRRK++NE L LRS++P + + D+ASII +DYI+EL +
Sbjct: 134 HITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQ 182
Score = 55 (24.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 148 SAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAV 206
SA + V + ++RV+ G +++ +V+ + +K+ A ESL L+I+ +I V
Sbjct: 326 SAAAIAGIVGVPDVRVEFAGPNLVLKTVS-HRAPGQALKIIAALESLSLEILHVSICTV 383
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 103 (41.3 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+ER RR+++N L LR +VP+ S+MDKA+++ + + Y+++L +
Sbjct: 35 AERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSE 79
Score = 56 (24.8 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGR 209
SV C+ R M +L +A S+ + + A I V GR
Sbjct: 122 SVCCADRPGLMSELGDAERSVSARAVRAEIATVGGR 157
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 129 (50.5 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 38/153 (24%), Positives = 79/153 (51%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
N +ER RR++LN + LR + PN +K D+ASI+ DAI+YI EL+ K ++ + +
Sbjct: 266 NFATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILVEQKR 325
Query: 116 SGKSKKNFGFDFEQELPV-----LLRPKKKKIDRFFDSAGSRTAPVEI----LELRVKTM 166
G +++ +QE +RP + D A R++ V+ + V+ +
Sbjct: 326 HGNNRRKV-LKLDQEAAADGESSSMRPVRDDQDNQLHGA-IRSSWVQRRSKECHVDVRIV 383
Query: 167 GEKILVVSVTCSKRTDTMVKLCEAFESLKLKII 199
+++ + +T K+ ++++ + + +L++I
Sbjct: 384 DDEVNI-KLTEKKKANSLLHAAKVLDEFQLELI 415
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 121 (47.7 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 38/162 (23%), Positives = 83/162 (51%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRR+++N L +LRS++P+ I + D+ASI+ AID+++ L +Q +
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQ-------LQS 247
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
LE+ K + D ++++P + ++ A ++ L++ T+ E + +
Sbjct: 248 LEAQKRSQQSD-DNKEQIPEDNSLRNISSNKL--RASNKEEQSSKLKIEA-TVIESHVNL 303
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAF 215
+ C+++ +++ E L+ ++ NIT+ + +F
Sbjct: 304 KIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSF 345
Score = 43 (20.2 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 17/72 (23%), Positives = 30/72 (41%)
Query: 10 QEYQNYWETKMFLQNE--EFDTWPLDEAFSGYYDXXXXXXXXXXXXXKNIV-----SERN 62
Q + WE + +L +E EF + P+ + YY + + + R+
Sbjct: 98 QTLEKPWELENYLPHEVPEFHS-PIHSETNHYYHNPSLEGVNEAISNQELPFNPLENARS 156
Query: 63 RRKKLNERLFAL 74
RRK+ N L +L
Sbjct: 157 RRKRKNNNLASL 168
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/46 (45%), Positives = 37/46 (80%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SE+ RR K+NE++ AL+ ++PN +K DKAS++ +AI+Y+++L Q
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQ 145
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKM-DKASIIKDAIDYIQELHEQEKRIRDEIMELES 116
++ER RR+K++ER+ L+ +VP +K+ KA ++ + I+YIQ L Q + + M+LE+
Sbjct: 149 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS---MKLEA 205
Query: 117 GKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVT 176
S+ N G + P PK+ I +S S + + L + G + V +V
Sbjct: 206 VNSRMNPGIEV---FP----PKEVMILMIINSIFSIFFTKQYMFLSRYSRGRSLDVYAVR 258
Query: 177 ----CSKRTDTMVKLCEAFESLKLKIITANIT 204
C+KR+D C LK I + N+T
Sbjct: 259 SFKHCNKRSDLCFCSCSPKTELKTTIFSQNMT 290
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 118 (46.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
SER RR ++NE+L AL+ ++PN +K DK S++ +AIDY++ L Q
Sbjct: 21 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQ 65
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 22/46 (47%), Positives = 38/46 (82%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SE+ RR K+NE++ AL+S++PN +K DKAS++ +AI+Y+++L Q
Sbjct: 110 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQ 155
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SER RR ++NER+ AL+ ++P+ SK DKASI+ +AIDY++ L Q
Sbjct: 264 LSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQ 309
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/61 (45%), Positives = 44/61 (72%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
+++SER RR+KLNE L+S++P++ K+DKASI+ + I Y++ L EKR++ ELE
Sbjct: 379 HVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVL---EKRVK----ELE 431
Query: 116 S 116
S
Sbjct: 432 S 432
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
K +ER RR LNER AL+ ++P+ SK D+ASI++D IDYI EL + ++ +
Sbjct: 214 KPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERK 273
Query: 115 ESGKSKKN 122
G KN
Sbjct: 274 RCGGRHKN 281
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 109 (43.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHEQ 103
+I ERNRR+++NE L LRS++P + + D+ASI+ AI++++EL +Q
Sbjct: 92 HIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQ 141
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 173 VSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
V V +R ++K+ ++L+L ++ N+T + +L T ++V
Sbjct: 272 VRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVLYTLSVKV 317
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SER RR ++NER+ AL+ ++P+ S+ DKASI+ +AIDY++ L Q
Sbjct: 263 LSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQ 308
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 108 (43.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHE 102
+I ERNRR+++NE L LRS++P + + D+ASI+ AID+++EL +
Sbjct: 97 HIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQ 145
Score = 54 (24.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 11/48 (22%), Positives = 27/48 (56%)
Query: 173 VSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRF 220
+ V ++R ++K+ ++L+L ++ N+TA+ L + ++ RF
Sbjct: 248 IRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALYSISVK-RF 294
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 125 (49.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 24/60 (40%), Positives = 45/60 (75%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESG 117
+SER RR ++NE++ AL+ ++PN +K+DKAS++ +AI+Y++ L +++ +IM + SG
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL-----QLQVQIMSMASG 404
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 122 (48.0 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 21/46 (45%), Positives = 38/46 (82%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SE+ RR ++NE++ AL+S++PN +K DKAS++ +AI+Y+++L Q
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQ 249
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 105 (42.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 56 NIVSERNRRKKLNERLFALRSVVP-NISKM-DKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRR+++NE L LRS++P + S+ D+ASI+ AI+Y++EL + +
Sbjct: 113 HIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQL-------LQS 165
Query: 114 LESGKSKKN 122
LE KS KN
Sbjct: 166 LEVQKSLKN 174
Score = 54 (24.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 147 DSAGSRTA---PVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANI 203
D+AGS + I ++ V TM E + V +R ++KL + L++ + N+
Sbjct: 223 DTAGSAESGRQSAAIADIEV-TMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNV 281
Query: 204 TAVAGRLLKTAFIEV 218
T V +L + ++V
Sbjct: 282 TTVDAMVLYSFSLKV 296
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 104 (41.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
++E+ RR ++N L ALR +VPN K+DKA+++ I+ ++EL ++
Sbjct: 69 LAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK 114
Score = 51 (23.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 170 ILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRL 210
I S C + + + ++ L+L+ I A I +V GR+
Sbjct: 149 IFKASFCCEDQPEAISEIIRVLTKLQLETIQAEIISVGGRM 189
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 113 (44.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 56 NIVSERNRRKKLNERLFALRSVVP--NISKMDKASIIKDAIDYIQELHE 102
+I ERNRRK++NE L LRS++P + + D+ASII +DYI+EL +
Sbjct: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQ 187
Score = 46 (21.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 160 ELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAV 206
+++V+ G +++ +V+ + VK+ A E L+I+ A I+ V
Sbjct: 319 DVKVEFAGANLVLKTVS-QRSPGQAVKIIAALEGRSLEILHAKISTV 364
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 115 (45.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 44/169 (26%), Positives = 83/169 (49%)
Query: 56 NIVSERNRRKKLNERLFALRSVVP--NISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRR+++NE L +LRS+ P I + D+ASII I++I+EL + + + E +
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVL--ESKK 60
Query: 114 LESGKSKKNFGFDFEQELPVLL-----RPKKKKIDRF-----FDSAGSR-TAPVEILELR 162
++ +F +D + P L R +I+ F G+ +P +E +
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120
Query: 163 VKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLL 211
+ G + V+ V + +VK+ E L +++ NI+++ +L
Sbjct: 121 IS--GSNV-VLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVL 166
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
++++SER RR+KLNE ALRS++P +K DKAS++ A + + L + ++ + E+
Sbjct: 289 QHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREV 348
Query: 115 ESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILV 172
E+ K G E+E+ LRP+++ R S T+ L+LRV G+ I V
Sbjct: 349 EA----KLAG---EREIENDLRPEERFNVRIRHIPES-TSRERTLDLRVVLRGDIIRV 398
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 121 (47.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
++++SER RR+KLN+ AL++V+P SK DKASI+ A ++I+ L + + ++ EL
Sbjct: 184 QHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEEKNREL 243
Query: 115 ES 116
E+
Sbjct: 244 EA 245
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 121 (47.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SER RR ++NE+L AL+ +VP+ +K DKASI+ +AI+Y++ L Q
Sbjct: 235 LSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQ 280
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 119 (46.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 48/160 (30%), Positives = 75/160 (46%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELH------EQEKRI 107
+I ERNRR+++NE L +LRS++P + + D+ASI+ AID+I+EL E EKR
Sbjct: 117 HIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEKRK 176
Query: 108 --RDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKT 165
DE + S S + V + RF G T VE T
Sbjct: 177 DGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARF---GGGDTTEVEA------T 227
Query: 166 MGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITA 205
+ + + + V C + ++K + E LKL I+ I++
Sbjct: 228 VIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISS 267
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 121 (47.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 22/42 (52%), Positives = 34/42 (80%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQEL 100
+ER RR N+R F L++++PN +K+D+ASI+ +AIDYI+EL
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL 292
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 120 (47.3 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
SER RR K+N+R+ L+ +VPN SK DKAS++ + I+Y+++L Q
Sbjct: 221 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQ 265
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 102 (41.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 17/42 (40%), Positives = 33/42 (78%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQEL 100
+ER RR+++N L LR++VP+ S+MDKA+++ + + +++EL
Sbjct: 26 AERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVREL 67
Score = 48 (22.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 175 VTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
V C+ R M L A S+ + + A + V GR ++V
Sbjct: 123 VCCADRPGLMSDLGRAVRSVSARPVRAEVATVGGRTRSVLELDV 166
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 120 (47.3 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
++++SER RR+KLN+ AL++V+P SK DK SI+ A +Y++ L + + ++ EL
Sbjct: 254 QHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNREL 313
Query: 115 ES 116
E+
Sbjct: 314 EA 315
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 21/46 (45%), Positives = 37/46 (80%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SER RR ++NE++ AL+ ++PN +K+DKAS++ +AI+Y++ L Q
Sbjct: 319 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQ 364
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 101 (40.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHE 102
+I ERNRRK++NE L LRS++P + D+ASI+ AI++++EL +
Sbjct: 136 HIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINFVKELEQ 184
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/69 (24%), Positives = 38/69 (55%)
Query: 147 DSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAV 206
+++GS+ + V +E+ TM E + V +R +++L A + +L ++ N+T+
Sbjct: 251 EASGSKPSAVADVEV---TMVESHANLRVLSRRRPRQLLRLVVALQGHRLTVLHLNMTS- 306
Query: 207 AGRLLKTAF 215
AG ++ +F
Sbjct: 307 AGHMVLYSF 315
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 110 (43.8 bits), Expect = 0.00020, P = 0.00020
Identities = 20/52 (38%), Positives = 39/52 (75%)
Query: 61 RNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIM 112
+NRR+++NERL L+ ++PN +K+D ++++++AI Y++ LH Q K + + M
Sbjct: 124 KNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSDEM 175
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
Identities = 40/153 (26%), Positives = 75/153 (49%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRR+ +N+ L +LRS++P+ I + D+A+++ AIDY+++L +Q ++ E
Sbjct: 119 HIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAAAE 178
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
SG + V + P+ + ++ G VE +G + V
Sbjct: 179 -RSGVGVVAAAATAASD-GVFVSPQYTS---YSEARGGSGVDVEA----TAAVGGHVRV- 228
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAV 206
V + T +V+ A E L+L ++ +T+V
Sbjct: 229 RVAGRRWTGRLVRAVAAMEDLRLTVLHLAVTSV 261
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 107 (42.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
++ER RR+K+NER+ L+ ++P +K K S+++D I+Y++ L Q
Sbjct: 157 LAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQ 202
Score = 41 (19.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 20 MFLQNEEFDTWP 31
+F+Q +E +WP
Sbjct: 70 LFIQEDEMSSWP 81
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 21/46 (45%), Positives = 35/46 (76%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SER RR ++NER+ AL+ ++P +K DKAS++ +AI+Y++ L Q
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 112 (44.5 bits), Expect = 0.00040, P = 0.00040
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNIS-KMDKASIIKDAIDYIQELHEQEKR 106
K+ V+E+ RR K+NER LR ++PN K D AS + + IDY+Q L E+ ++
Sbjct: 49 KHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQK 101
>TAIR|locus:2031978 [details] [associations]
symbol:AT1G05710 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 ProtClustDB:CLSN2687695 EMBL:AY072363
EMBL:BT006558 IPI:IPI00544028 RefSeq:NP_849597.1 UniGene:At.42378
UniGene:At.72027 ProteinModelPortal:Q8VY82 IntAct:Q8VY82
PRIDE:Q8VY82 EnsemblPlants:AT1G05710.2 GeneID:837078
KEGG:ath:AT1G05710 TAIR:At1g05710 InParanoid:Q8VY82 OMA:MENTVGV
PhylomeDB:Q8VY82 ArrayExpress:Q8VY82 Genevestigator:Q8VY82
Uniprot:Q8VY82
Length = 171
Score = 105 (42.0 bits), Expect = 0.00043, P = 0.00043
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEK 105
S + R+ K+ ER+ AL+ +V K D AS++ DA+ YI+ LHEQ K
Sbjct: 35 SSKERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVK 81
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 19/58 (32%), Positives = 38/58 (65%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMD----KASIIKDAIDYIQELHEQEKRIRD 109
N++ ER RR +N+R+ L +++P + D K +I+K ++DYI++L +++R +D
Sbjct: 26 NLI-ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKD 82
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 19/58 (32%), Positives = 38/58 (65%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMD----KASIIKDAIDYIQELHEQEKRIRD 109
N++ ER RR +N+R+ L +++P + D K +I+K ++DYI++L +++R +D
Sbjct: 26 NLI-ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKD 82
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 44/146 (30%), Positives = 72/146 (49%)
Query: 64 RKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKKNF 123
R+K NE+ LR++VP ++++DK SI+ + I Y+QEL E R+ ELES NF
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQEL---EARVE----ELESCMGSVNF 398
Query: 124 GFDFEQELP------VLLRPKKKKID---RFFDSAGSRTAPVEILE----LRVKTMGEKI 170
+ +++ VL+ D + D++G T V + LRVK + E
Sbjct: 399 -VERQRKTTENLNDSVLIEETSGNYDDSTKIDDNSGE-TEQVTVFRDKTHLRVK-LKETE 455
Query: 171 LVVSVTCSKRTDTMVKLCEAFESLKL 196
+V+ V CS R + + E +L +
Sbjct: 456 VVIEVRCSYRDYIVADIMETLSNLHM 481
>TAIR|locus:2158392 [details] [associations]
symbol:BHLH92 "AT5G43650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB016875 EMBL:AY065390 EMBL:AY096718 IPI:IPI00529613
RefSeq:NP_199178.1 UniGene:At.28504 ProteinModelPortal:Q9FIX5
SMR:Q9FIX5 PRIDE:Q9FIX5 EnsemblPlants:AT5G43650.1 GeneID:834385
KEGG:ath:AT5G43650 TAIR:At5g43650 eggNOG:NOG311504
HOGENOM:HOG000090799 InParanoid:Q9FIX5 OMA:QSYLALH PhylomeDB:Q9FIX5
ProtClustDB:CLSN2686830 Genevestigator:Q9FIX5 Uniprot:Q9FIX5
Length = 247
Score = 109 (43.4 bits), Expect = 0.00054, P = 0.00054
Identities = 29/85 (34%), Positives = 48/85 (56%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
++++ ER RR+K + AL S++P +K DK SI++ A+D I +L +K + I +
Sbjct: 89 RHMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEKAVDEIAKLQRLKKELVRRIKVI 148
Query: 115 ESGKSKKNFGFDFEQELPVLLRPKK 139
E KS K+ G D E V + K+
Sbjct: 149 EE-KSAKD-GHDEMSETKVRVNLKE 171
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 101 (40.6 bits), Expect = 0.00056, P = 0.00056
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKD-AIDYIQELHEQEKRIRD 109
++ER RR +++ER+ L+ +VPN+ K + + D A+DYI++L +Q K + D
Sbjct: 82 IAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLND 134
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 111 (44.1 bits), Expect = 0.00057, P = 0.00057
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQEL-H-----EQEKRI 107
+I ERNRR+++N+ L LRS++P K D+ASI+ AID+I+EL H E +K
Sbjct: 90 HIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHH 149
Query: 108 RDEIME-LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFF 146
++ + + S S+ + G EQE P +P + +FF
Sbjct: 150 NAKLNQSVTSSTSQDSNG---EQENPH--QPSSLSLSQFF 184
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 111 (44.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SER RR+K+NE + AL+ ++P +K D++S++ D I+Y++ L Q
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
Score = 38 (18.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 15 YWETKMFLQNEEFDTW 30
Y + +F+Q +E +W
Sbjct: 76 YHQQSLFIQEDEMASW 91
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 97 (39.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 20/49 (40%), Positives = 36/49 (73%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHE 102
+I ERNRR+++NE + +LR+++P I + D+ASI+ AI+Y++ L +
Sbjct: 180 HIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQ 228
Score = 52 (23.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 173 VSVTCSKRTDTMVKLCEAFESLKLKIITANIT 204
+ V C K+ ++K + E LKL ++ NIT
Sbjct: 287 LKVQCEKKQGQLLKGIISLEKLKLTVLHLNIT 318
>UNIPROTKB|Q8LII5 [details] [associations]
symbol:OJ1167_G06.116 "Putative uncharacterized protein
OJ1167_G06.116" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 EMBL:AP003817 EMBL:AK242001
EnsemblPlants:LOC_Os07g47960.1 OMA:HAESETS Uniprot:Q8LII5
Length = 157
Score = 88 (36.0 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 60 ERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKS 119
ER + L+E+L LRS+ + + + SII DA +YI+EL ++ R+ EI E+
Sbjct: 5 ERKKAAALHEKLQILRSITHSHA-LSNTSIITDASEYIKELKQKVVRLNKEIACAEAAAL 63
Query: 120 KKN 122
++N
Sbjct: 64 RQN 66
Score = 47 (21.6 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 163 VKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITA 201
V+T+G L+ + +V + EAF+ L L ++ A
Sbjct: 73 VETLGHGFLINVFSDKSCPGLLVSILEAFDELGLNVLEA 111
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 105 (42.0 bits), Expect = 0.00074, P = 0.00074
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+ RR ++N+++ L+ +VPN SK DKAS++ + IDY+++L Q
Sbjct: 9 NNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQ 53
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 109 (43.4 bits), Expect = 0.00081, P = 0.00081
Identities = 44/168 (26%), Positives = 80/168 (47%)
Query: 56 NIVSERNRRKKLNERLFALRSVVP-NISKM-DKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRRK++N L L+S++P + S+ D+ASII+ I Y+++L ++ + + ++
Sbjct: 104 HIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEAQLKA 163
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRT--APVEIL-ELRVKTMGEKI 170
+ +S F DF P S+ S +E++ ++ V TM E+
Sbjct: 164 TKLNQSPNIFS-DFFM-FPQYSTATATATATASSSSSSHHHHKRLEVVADVEV-TMVERH 220
Query: 171 LVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
+ V + + K+ F SL L + N+T L T ++V
Sbjct: 221 ANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKV 268
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 88 (36.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 14/42 (33%), Positives = 29/42 (69%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQEL 100
+ER RR+++N L LR ++P+ +MDKA+++ ++ ++ L
Sbjct: 73 AERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHL 114
Score = 58 (25.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVR 219
+V+C R + + F L+L+ ++A+++ + GR + AF+ R
Sbjct: 158 TVSCDDRPGLLADIAATFRRLRLRPLSADMSCLGGRT-RHAFVLCR 202
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 110 (43.8 bits), Expect = 0.00084, P = 0.00084
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEK 105
++ER RR+++ ER+ AL+ +VPN +K DKAS++ + IDY++ L Q K
Sbjct: 151 IAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 198
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 108 (43.1 bits), Expect = 0.00085, P = 0.00085
Identities = 36/131 (27%), Positives = 64/131 (48%)
Query: 59 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGK 118
+ER RR+++N L LR++VP KMDKA+++ + + ++++L R+ + SG
Sbjct: 85 AERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKKLKSAAARVGRRAT-VPSGA 143
Query: 119 SK----KNFGFDFEQELPVLLRPKKKKIDR---FFD-SAGSRTAPVEILELRVKTMGEKI 170
+ + E P+LLR DR F D + +E++ V T+G ++
Sbjct: 144 DEVAVDEASATGGGGEGPLLLRATLSCDDRADLFVDVKRALQPLGLEVVGSEVTTLGGRV 203
Query: 171 -LVVSVTCSKR 180
L V+C R
Sbjct: 204 RLAFLVSCGSR 214
>TAIR|locus:2083460 [details] [associations]
symbol:AT3G20640 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000241059 EMBL:AP002034 EMBL:AK118054 EMBL:BT008580
IPI:IPI00530194 RefSeq:NP_188700.1 UniGene:At.38202
ProteinModelPortal:Q8GXT3 SMR:Q8GXT3 EnsemblPlants:AT3G20640.1
GeneID:821611 KEGG:ath:AT3G20640 TAIR:At3g20640 eggNOG:NOG253493
InParanoid:Q8GXT3 OMA:YDQMASA PhylomeDB:Q8GXT3
ProtClustDB:CLSN2915619 Genevestigator:Q8GXT3 Uniprot:Q8GXT3
Length = 454
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 63 RRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKKN 122
R++K+ +R+ AL+ +V K D AS++ +AI+YI+ LH+Q + + M+ SG S ++
Sbjct: 346 RKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMK--SGASLQH 403
Query: 123 FGFDFEQELPVLLRP 137
D EL V P
Sbjct: 404 QQSDHSTELEVSEEP 418
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 249 236 0.00089 113 3 11 22 0.39 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 103
No. of states in DFA: 590 (63 KB)
Total size of DFA: 172 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.08u 0.20s 23.28t Elapsed: 00:00:01
Total cpu time: 23.09u 0.20s 23.29t Elapsed: 00:00:01
Start: Sat May 11 00:10:30 2013 End: Sat May 11 00:10:31 2013
WARNINGS ISSUED: 1