BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025727
(249 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 259 bits (661), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 167/213 (78%), Gaps = 10/213 (4%)
Query: 10 QEYQNYWETKMFLQNEEFD---TWPLDEAFSGYYDSSSPDGAASSAASKNIVSERNRRKK 66
QE NYWE FLQNE+F+ +WPL+EA SG YDSSSPDGAASS ASKNIVSERNRR+K
Sbjct: 7 QELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQK 66
Query: 67 LNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESG-KSKKNFGF 125
LN+RLFALRSVVPNI+KMDKASIIKDAI YI+ L +EK++ EI ELES KS +F
Sbjct: 67 LNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSK 126
Query: 126 DFEQELPVLLRPKK-KKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTM 184
DF+++L V + KK K++D +GS T+ +E+LEL+V MGE+ +VVSVTC+KRTDTM
Sbjct: 127 DFDRDLLVPVTSKKMKQLD-----SGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDTM 181
Query: 185 VKLCEAFESLKLKIITANITAVAGRLLKTAFIE 217
VKLCE FESL LKI+T+N+T+ +G + T FIE
Sbjct: 182 VKLCEVFESLNLKILTSNLTSFSGMIFHTVFIE 214
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 229 bits (585), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 157/225 (69%), Gaps = 12/225 (5%)
Query: 6 EDYQQEYQNYWETKMFLQNEE--FDTWPLDEAFSGYYDSSSPDGAASS-AASKNIVSERN 62
ED EY+NYWET MF QN+E FD+WP++EAFSG +SSSPDGAA+S A+SKN+VSERN
Sbjct: 2 EDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERN 61
Query: 63 RRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKS--- 119
RR+KLN+RLFALRSVVPNISK+DKAS+IKD+IDY+QEL +QEK + EI ELES +
Sbjct: 62 RRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLE 121
Query: 120 ------KKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
NF Q+ + KK + S + P+E+LE++V MGEK +VV
Sbjct: 122 NPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVV 181
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
+TCSK+ +TMV+LC+ ESL L I+T N ++ RL T F++V
Sbjct: 182 CITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQV 226
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 18/165 (10%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI-- 111
+KN+++ER RRKKLN+RL+ALRS+VP I+K+D+ASI+ DAI+Y++EL + K ++DE+
Sbjct: 313 AKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 112 -MELESGKSKKNFGFDFEQELPVLLRPK----------KKKID-RFFDSAGSRTAPVEIL 159
E E G ++ G + P K+ +D + G P
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEP---- 428
Query: 160 ELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANIT 204
++ V + + V V C + +L EA +SL L++ AN T
Sbjct: 429 QVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTT 473
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 101/184 (54%), Gaps = 22/184 (11%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELH---EQEKRIRDEI 111
++ +ER RR+KLN+R ++LR+VVPN+SKMDKAS++ DAI YI EL +Q + ++EI
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEI 474
Query: 112 MELESGKSKK-NFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKI 170
+ G SK+ N G R K++K S TA +E+ VK +G +
Sbjct: 475 QKKLDGMSKEGNNGKGCGS------RAKERK-----SSNQDSTASSIEMEIDVKIIGWDV 523
Query: 171 LVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFSLFFSTY 230
+ + V C K+ + EA + L L++ A+++ V +++ A +++ FF+
Sbjct: 524 M-IRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQFFN------ 576
Query: 231 HHQL 234
H QL
Sbjct: 577 HDQL 580
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 38/181 (20%)
Query: 57 IVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQEL-----------HEQEK 105
+ +ER RR+KLN+R ++LR+VVPN+SKMDKAS++ DAI YI EL E +K
Sbjct: 418 VEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQK 477
Query: 106 RIRDEIMELESGKSKKNFGFD--FEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRV 163
+I ++M E+G +K + QE VL+ +E+ V
Sbjct: 478 QI--DVMNKEAGNAKSSVKDRKCLNQESSVLIE----------------------MEVDV 513
Query: 164 KTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFF 223
K +G + + + CSKR K EA + L L++ A+++ V +++ A +++ FF
Sbjct: 514 KIIGWDAM-IRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFF 572
Query: 224 S 224
+
Sbjct: 573 T 573
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 90/153 (58%), Gaps = 11/153 (7%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
S+ ++SER RR ++ ++L+ALRS+VPNI+KMDKASI+ DA+ Y+QEL Q K+++ +I
Sbjct: 130 SRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAG 189
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
LE + N +++ P +K + R + S+ +I+++ V + EK V
Sbjct: 190 LE---ASLNSTGGYQEHAP---DAQKTQPFRGINPPASK----KIIQMDVIQVEEKGFYV 239
Query: 174 SVTCSKRTDTMVKLCEAFESL-KLKIITANITA 205
+ C+K L ++ ESL ++ +N+++
Sbjct: 240 RLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSS 272
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 31/180 (17%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELH------EQEK-RI 107
++ +ER RR+KLN+R +ALR+VVPN+SKMDKAS++ DAI YI EL E EK +I
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQI 511
Query: 108 RDEIMELE---SGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVK 164
++++ E++ +G+ G D S+ S PV +E+ VK
Sbjct: 512 KNQLEEVKLELAGRKASASGGDMS-------------------SSCSSIKPVG-MEIEVK 551
Query: 165 TMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFS 224
+G + + V SKR +L A L+L++ A+++ V +++ A +++ F ++
Sbjct: 552 IIGWDAM-IRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYT 610
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 53 ASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIM 112
A ++ +ER RR+KLN+R +ALRSVVPNISKMDKAS++ DA+ YI ELH + K +M
Sbjct: 431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLK-----VM 485
Query: 113 ELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEI-LELRVKTMGEKIL 171
E E ++ G+ S P+ + ++ V+T GE +
Sbjct: 486 EAE----RERLGY-------------------------SSNPPISLDSDINVQTSGEDV- 515
Query: 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKT 213
V + C + ++ AFE K+++I +N+ +L T
Sbjct: 516 TVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHT 557
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+KN+++ER RRKKLN+RL+ LRSVVP ISKMD+ASI+ DAIDY++EL + RI D E
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ---RINDLHNE 362
Query: 114 LESGKSKK----NFGFDFEQELPVLL--RPKKKKIDRFFDSAGSRTAPVEILELRVKTMG 167
LES + F P L R K++ S + A VE+ R++
Sbjct: 363 LESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEV---RLRE-- 417
Query: 168 EKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAG 208
+ + + + C +R ++ +A ++L L + A I+ G
Sbjct: 418 GRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 458
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+KN+++ER RRKKLN+RL+ LRSVVP ISKMD+ASI+ DAIDY++EL + RI D E
Sbjct: 266 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ---RINDLHTE 322
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
LES + P L + K+ S S +E+R++ K + +
Sbjct: 323 LESTPPSSS-SLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLRE--GKAVNI 379
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAG 208
+ C +R ++ A ++L L + A I+ G
Sbjct: 380 HMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNG 414
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
++ +ER RR+KLN+R +ALRSVVPNISKMDKAS++ DAI YI+EL E+ K + DE +
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGT 454
Query: 115 ESGKSKKN 122
+ S+ N
Sbjct: 455 DKSLSESN 462
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 84/151 (55%), Gaps = 8/151 (5%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
SKN+ SER RR+++N+ ++ LR+VVP I+K++K I DA+DYI EL +++++ DE+
Sbjct: 263 SKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKG 322
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
+ + K+ +E + P+ +++ S ++ +++ V GE+ ++
Sbjct: 323 INEMECKEIAA----EEQSAIADPEAERV----SSKSNKRVKKNEVKIEVHETGERDFLI 374
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANIT 204
V + D +L EA + +L+II N T
Sbjct: 375 RVVQEHKQDGFKRLIEAVDLCELEIIDVNFT 405
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 45/56 (80%), Gaps = 3/56 (5%)
Query: 53 ASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIR 108
A ++ +ER RR+KLN+R +ALR+VVPNISKMDKAS++ DAI YI ++ +K+IR
Sbjct: 318 ALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDM---QKKIR 370
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 5/96 (5%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
SKN+++ER RRK+LN+RL LRS+VP ISKMD+ SI+ DAIDY++EL ++ +++DE E
Sbjct: 177 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQE 236
Query: 114 LESGKSKKN---FGF--DFEQELPVLLRPKKKKIDR 144
L + + + FG D P++ K +IDR
Sbjct: 237 LGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDR 272
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMEL 114
++ +ER RR+KLN R +ALR+VVPN+SKMDK S+++DA+ YI EL + + E +EL
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINEL-----KSKAENVEL 397
Query: 115 ESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVS 174
E K F+ +E+ R + ++ + A E++++ VK M +V
Sbjct: 398 E--KHAIEIQFNELKEI-AGQRNAIPSVCKYEEKAS------EMMKIEVKIMESDDAMVR 448
Query: 175 VTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFF 223
V K +L A L+L++ A+I+ + +++ A +++ +
Sbjct: 449 VESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIY 497
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
S N+ +ER RR+KL+ RL ALRS VP ++ M KASI++DAI YI EL K + + E
Sbjct: 31 SPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHE 90
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVV 173
+E + D EQ P +++P+ + D + + E ++L +GE+ +
Sbjct: 91 MEEAPPE----IDEEQTDP-MIKPEVETSD--LNEEMKKLGIEENVQL--CKIGERKFWL 141
Query: 174 SVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL 221
+ KR K E L +II ++T G +L +A ++ + L
Sbjct: 142 KIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQTQEL 189
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 7 DYQQEYQNYWETKMFLQNEEFDTWPL---DEAFSGYYDSSSPDGAASSAASKNIVSERNR 63
D + EY + +F E P DE + P S A +I++ER R
Sbjct: 101 DMEHEYSPTYLNSIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQSNAQDHIIAERKR 160
Query: 64 RKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKKNF 123
R+KL +R AL ++VP + KMDKAS++ DA+ +I+ L E+ + ELE K ++
Sbjct: 161 REKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQER-------VGELEEQKKERRL 213
Query: 124 GFDFEQELPVLLRPKKKKID----RFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSK 179
E VL++ K +D F S + +++ E+ V+ E +L + + C K
Sbjct: 214 ------ESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVL-IKILCEK 266
Query: 180 RTDTMVKLCEAFESLKLKIITANI 203
+ + K+ E L + I +++
Sbjct: 267 QKGHLAKIMAEIEKLHILITNSSV 290
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 36/160 (22%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESG 117
+SE+ RR+KLNER LRS++P+ISK+DK SI+ D I+Y+Q+L +KR++ ELES
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDL---QKRVQ----ELESC 460
Query: 118 KSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTA---------------PVEIL--- 159
+ D E + ++ K+KK D + A + P +I
Sbjct: 461 RESA----DTETRITMM---KRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAG 513
Query: 160 ---ELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKL 196
LR+ ++G ++ V+ + C+ R ++++ + L L
Sbjct: 514 LTDNLRISSLGNEV-VIELRCAWREGILLEIMDVISDLNL 552
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
SKN+++ER RRK+LN+RL LRS+VP I+KMD+ SI+ DAIDY++EL ++ +++++ E
Sbjct: 150 SKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQE 209
Query: 114 LESG 117
L S
Sbjct: 210 LGSN 213
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 52 AASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI 111
A ++ +E+ RR+KLN R +ALR++VP +S+MDKAS++ DA+ YI+ L + + EI
Sbjct: 246 AVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEI 305
Query: 112 MEL---ESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGE 168
++ E+ K + + + K K +R D LE++VK +GE
Sbjct: 306 KKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSD-----------LEVQVKIVGE 354
Query: 169 KILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVA 207
+ ++ V L A + ++ AN + ++
Sbjct: 355 EA-IIRVQTENVNHPTSALMSALMEMDCRVQHANASRLS 392
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 46/56 (82%)
Query: 55 KNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE 110
+++++ER RR+KLNERL AL +++P + K DKA++++DAI ++++L E+ K++ +E
Sbjct: 132 EHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEE 187
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 19/111 (17%)
Query: 44 SPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
SP+ A + V E+ RR+KLNER LR ++P+I+K+DK SI+ D I+Y+QEL
Sbjct: 432 SPE--ARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQEL--- 486
Query: 104 EKRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTA 154
E+R++ ELES + D E + ++ +KK D AG RT+
Sbjct: 487 ERRVQ----ELESCREST----DTETRGTMTMK-RKKPCD-----AGERTS 523
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 30/195 (15%)
Query: 35 AFSGYYDS-SSPDGAAS--SAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIK 91
A G ++S GAA SA +++SER RR+KLNE L+S++P+I +++KASI+
Sbjct: 395 AGGGAWESCGGATGAAQEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILA 454
Query: 92 DAIDYIQELHEQEKRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKID--RFFDSA 149
+ I Y++EL + + ELES S++ E ++ RP + + R A
Sbjct: 455 ETIAYLKELQRR-------VQELES--SREPASRPSETTTRLITRPSRGNNESVRKEVCA 505
Query: 150 GSRTAPVEILELRVK----------------TMGEKILVVSVTCSKRTDTMVKLCEAFES 193
GS+ E+ V+ T+ +K +++ V C M ++ +A +S
Sbjct: 506 GSKRKSPELGRDDVERPPVLTMDAGSSNVTVTVSDKDVLLEVQCRWEELLMTRVFDAIKS 565
Query: 194 LKLKIITANITAVAG 208
L L +++ +A G
Sbjct: 566 LHLDVLSVQASAPDG 580
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 32/197 (16%)
Query: 35 AFSGYYDS-SSPDGAA---SSAASKN-IVSERNRRKKLNERLFALRSVVPNISKMDKASI 89
A G ++S GAA S +KN ++SER RR+KLNE L+S++P+I +++KASI
Sbjct: 391 AGGGAWESCGGATGAAQEMSGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASI 450
Query: 90 IKDAIDYIQELHEQEKRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKID--RFFD 147
+ + I Y++EL + + ELES S++ E ++ RP + + R
Sbjct: 451 LAETIAYLKELQRR-------VQELES--SREPASRPSETTTRLITRPSRGNNESVRKEV 501
Query: 148 SAGSR------------TAPVEILELRVK----TMGEKILVVSVTCSKRTDTMVKLCEAF 191
AGS+ PV ++ T+ +K +++ V C M ++ +A
Sbjct: 502 CAGSKRKSPELGRDDVERPPVLTMDAGTSNVTVTVSDKDVLLEVQCRWEELLMTRVFDAI 561
Query: 192 ESLKLKIITANITAVAG 208
+SL L +++ +A G
Sbjct: 562 KSLHLDVLSVQASAPDG 578
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 7 DYQQEYQNYWETKMFLQNEEFDTWPLDEAFSGYYDSSSPDGAASSAA------------S 54
DY +Y NY NEE WP D + D+ S + AA S
Sbjct: 64 DYSDDY-NY--------NEEDLQWPRDLPYGSAVDTESQPPPSDVAAGGGRRKRRRTRSS 114
Query: 55 KN-----------IVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELH 101
KN I ERNRRK++NE L LRS++P + D+ASI+ AI+Y++EL
Sbjct: 115 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELE 174
Query: 102 EQEKRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKID-----RFFDSAGSRTAPV 156
+ ME + ++ G +Q D ++ + S A
Sbjct: 175 HHLQS-----MEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAE 229
Query: 157 EILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFI 216
+ E+ V TM E + + KR ++KL + +SL+L ++ N+T +L + +
Sbjct: 230 GMAEIEV-TMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISV 288
Query: 217 EV 218
+V
Sbjct: 289 KV 290
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELE 115
++V+ER RR+KLNE+ LRS+VP ++KMDK SI+ D I Y+ L R + ELE
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHL-------RKRVHELE 416
Query: 116 S 116
+
Sbjct: 417 N 417
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 49 ASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ----E 104
+ S A +I++ER RR+KL +R AL +++P + KMDKAS++ DAI +I+ L E E
Sbjct: 120 SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYE 179
Query: 105 KRIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVK 164
++ +++ ME K + D + P ++ S P E+ V+
Sbjct: 180 EQKKEKTMESVVLVKKSSLVLDENHQ------PSSSSSSDGNRNSSSSNLP----EIEVR 229
Query: 165 TMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANI 203
G+ +L + + C K+ ++K+ E L L I +N+
Sbjct: 230 VSGKDVL-IKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1
SV=1
Length = 344
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 46/176 (26%)
Query: 46 DGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEK 105
D A +A+ + +ER RR+++N L LRS++PN +K DKAS++ + I +++EL Q
Sbjct: 126 DAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTS 185
Query: 106 RIRDEIMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKT 165
+I D + P E +L V +
Sbjct: 186 QITD-----------------------------------------TYQVPTECDDLTVDS 204
Query: 166 M-----GEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFI 216
G ++ S C RTD M + A +SL+L+ + A I V GR+ F+
Sbjct: 205 SYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFL 260
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 53 ASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDE-- 110
A +++++ER RR+KL+E+ AL +++P + K DK +I+ DAI +++L EQ + +++E
Sbjct: 117 AKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKE 176
Query: 111 -IMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEK 169
++ES K F++E + P + FD A + E+ K
Sbjct: 177 ATRQMESMILVKKSKVFFDEEPNLSCSP---SVHIEFDQA--------LPEIEAKISQND 225
Query: 170 ILVVSVTCSKRTDTMVKLCEAFESLKLKI 198
IL + + C K M+ + E+ +L+I
Sbjct: 226 IL-IRILCEKSKGCMINILNTIENFQLRI 253
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 50 SSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQEL 100
S S+ +ER RR N+R F L++++PN +K+D+ASI+ +AIDYI+EL
Sbjct: 242 GSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL 292
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELH--------EQEK 105
+I ERNRRK++NE L LRS++P + + D+ASII AI++++EL ++ +
Sbjct: 199 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 258
Query: 106 RIRDEI---MELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVE----I 158
RI E M + S Q P+++ +++ G R E +
Sbjct: 259 RILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELE---GGGGLREETAENKSCL 315
Query: 159 LELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLL 211
++ VK +G + + + +R ++K A E L L I+ NIT + +L
Sbjct: 316 ADVEVKLLGFDAM-IKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVL 367
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 50 SSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRD 109
S +A + +SER RR ++NE++ AL+ ++PN +K+DKAS++ +AI+Y++ L +++
Sbjct: 342 SRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL-----QLQV 396
Query: 110 EIMELESG 117
+IM + SG
Sbjct: 397 QIMSMASG 404
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHE-----QEKRIR 108
+I ERNRRK++NE L LRS++P+ + D+ASI+ AI+Y++EL + KR R
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTR 176
Query: 109 DEIMELESGKSKKNFG-----FDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRV 163
+ + + G F F Q K + S A +E+
Sbjct: 177 THDPKGDKTSTSSLVGPFTDFFSFPQ--------YSTKSSSDVPESSSSPAEIEV----- 223
Query: 164 KTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEV 218
T+ E + + K+ ++KL + +SL+L ++ N+T + +L + + V
Sbjct: 224 -TVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRV 277
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 50 SSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
S AA+ + SER RR K+N+R+ L+ +VPN SK DKAS++ + I+Y+++L Q
Sbjct: 212 SRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQ 265
>sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1
SV=1
Length = 368
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 34/150 (22%)
Query: 67 LNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGKSKKNFGFD 126
+N L LRS++PN +K DKAS++ + I +++EL + I S+ N
Sbjct: 189 INNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVI-----------SETNLVPT 237
Query: 127 FEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKILVVSVTCSKRTDTMVK 186
EL V +++ D F ++ S+ C R+D +
Sbjct: 238 ESDELTVAFTEEEETGDGRF-----------------------VIKASLCCEDRSDLLPD 274
Query: 187 LCEAFESLKLKIITANITAVAGRLLKTAFI 216
+ + ++++LK + A IT V GR+ F+
Sbjct: 275 MIKTLKAMRLKTLKAEITTVGGRVKNVLFV 304
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 41/52 (78%)
Query: 52 AASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
AA + +SE+ RR ++NE++ AL+S++PN +K DKAS++ +AI+Y+++L Q
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQ 249
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 54 SKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQEL 100
+K +ER RR LNER AL+ ++P+ SK D+ASI++D IDYI EL
Sbjct: 213 NKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINEL 259
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 50 SSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
S AA + +SER RR ++NER+ AL+ ++P +K DKAS++ +AI+Y++ L Q
Sbjct: 283 SRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 37/46 (80%)
Query: 58 VSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
+SE+ RR K+NE++ AL+ ++PN +K DKAS++ +AI+Y+++L Q
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQ 145
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 52 AASKNIVSERNRRKKLNERLFALRSVVPNISK-MDKASIIKDAIDYIQELHEQEKRIRDE 110
A + ++ER RR+K++ER+ L+ +VP +K + KA ++ + I+YIQ L Q + +
Sbjct: 143 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS-- 200
Query: 111 IMELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEKI 170
M+LE+ S+ N G + + PK+ I +S S + + L + G +
Sbjct: 201 -MKLEAVNSRMNPGIE-------VFPPKEVMILMIINSIFSIFFTKQYMFLSRYSRGRSL 252
Query: 171 LVVSV----TCSKRTDTMVKLCEAFESLKLKIITANITA 205
V +V C+KR+D C LK I + N+T
Sbjct: 253 DVYAVRSFKHCNKRSDLCFCSCSPKTELKTTIFSQNMTC 291
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRR+++N L +LRS++P+ I + D+ASI+ AID+++ L +Q +
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQ-------LQS 247
Query: 114 LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVK---TMGEKI 170
LE+ K + + EQ P+ + R S R + E ++K T+ E
Sbjct: 248 LEAQKRSQQSDDNKEQ------IPEDNSL-RNISSNKLRASNKEEQSSKLKIEATVIESH 300
Query: 171 LVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAF 215
+ + + C+++ +++ E L+ ++ NIT+ + +F
Sbjct: 301 VNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSF 345
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHE 102
+I ERNRR+++NE L +LRS++P + + D+ASI+ AID+I+EL +
Sbjct: 117 HIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQ 165
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 50 SSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQ 103
S AA + +SER RR+K+NE + AL+ ++P +K D++S++ D I+Y++ L Q
Sbjct: 276 SRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 32 LDEAFSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIK 91
L +A + S S AA + +SER RR ++NER+ AL+ ++P+ SK DKASI+
Sbjct: 238 LSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILD 297
Query: 92 DAIDYIQELHEQ 103
+AIDY++ L Q
Sbjct: 298 EAIDYLKSLQLQ 309
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 26/140 (18%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELH------EQEKRI 107
+I ERNRR+++N+ L LRS++P K D+ASI+ AID+I+EL E +K
Sbjct: 90 HIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHH 149
Query: 108 RDEIME-LESGKSKKNFGFDFEQELPVLLRPKKKKIDRFF------------DSAGSRTA 154
++ + + S S+ + G EQE P +P + +FF S S
Sbjct: 150 NAKLNQSVTSSTSQDSNG---EQENP--HQPSSLSLSQFFLHSYDPSQENRNGSTSSVKT 204
Query: 155 PVEILELRVKTMGEKILVVS 174
P+E LE+ + I ++S
Sbjct: 205 PMEDLEVTLIETHANIRILS 224
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 28/169 (16%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
+I ERNRR+++NE L +LRS+ P I + D+ASII I++I+EL + +
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQL-------VQV 55
Query: 114 LESGKSKK-----NFGFDFEQELPVLLRPKKKKI-----------DRFFDSAGSRTAPVE 157
LES K +K +F +D + P L ++ F + +P
Sbjct: 56 LESKKRRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHA 115
Query: 158 ILELRVKTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAV 206
+E ++ G + V+ V + +VK+ E L +++ NI+++
Sbjct: 116 NVEAKIS--GSNV-VLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSM 161
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 56 NIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHEQEKRIRDEIME 113
++ ERNRRK++NE L LRS++P + + D+ASII ++YI EL + +
Sbjct: 104 HVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQV-------LQS 156
Query: 114 LESGKSKKNFG 124
LE+ K +K +
Sbjct: 157 LEAKKQRKTYA 167
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 26/171 (15%)
Query: 47 GAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKR 106
S+ ++++SER RR+KLNE ALRS++P +K DKAS++ A EQ
Sbjct: 281 SGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIA-------REQLSS 333
Query: 107 IRDEIMELESGKSKKNFGFDFEQELPVLLRPKKK---KIDRFFDSAGSRTAPVEILELRV 163
++ EI +L + E+E+ LRP+++ +I R + SR L+LRV
Sbjct: 334 LQGEISKLLERNREVEAKLAGEREIENDLRPEERFNVRI-RHIPESTSRE---RTLDLRV 389
Query: 164 KTMGEKILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTA 214
G+ I V D M++L E + +I ++ ++ R L A
Sbjct: 390 VLRGDIIRV--------DDLMIRLLEFLK----QINNVSLVSIEARTLARA 428
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 46/168 (27%)
Query: 52 AASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQELHEQEKRIRDEI 111
AA K+ +ER RR ++N + LR+++PN+ K DKAS++ + + Y EL +
Sbjct: 92 AAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKK--------- 142
Query: 112 MELESGKSKKNFGFDFEQELPVLLRPKKKKIDRFFDSAGSRTAPVEILELRVKTMGEK-- 169
Q++P T P LR+
Sbjct: 143 ---------------MVQDIP--------------------TTPSLEDNLRLDHCNNNRD 167
Query: 170 ILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIE 217
+ V +CS R M ++ E+ +++K K + A I V GR F++
Sbjct: 168 LARVVFSCSDREGLMSEVAESMKAVKAKAVRAEIMTVGGRTKCALFVQ 215
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 49 ASSAASKNIVSERNRRKKLNERLFALRSVVPNI-SKMDKASIIKDAIDYIQELHEQ 103
AS+ SK+ V+E+ RR K+NER LR ++PN K D AS + + IDY+Q L E+
Sbjct: 43 ASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEK 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,927,289
Number of Sequences: 539616
Number of extensions: 3380343
Number of successful extensions: 12308
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 12068
Number of HSP's gapped (non-prelim): 412
length of query: 249
length of database: 191,569,459
effective HSP length: 115
effective length of query: 134
effective length of database: 129,513,619
effective search space: 17354824946
effective search space used: 17354824946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)