Query 025727
Match_columns 249
No_of_seqs 182 out of 1284
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 16:18:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025727.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025727hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1am9a_ a.38.1.1 (A:) SREBP-1a 99.6 3.5E-16 2.6E-20 113.6 6.5 68 50-117 4-72 (80)
2 d1nlwa_ a.38.1.1 (A:) Mad prot 99.6 1.2E-15 8.7E-20 110.4 8.4 65 52-116 1-68 (79)
3 d1nkpb_ a.38.1.1 (B:) Max prot 99.6 3.5E-15 2.5E-19 108.9 8.0 65 52-116 2-68 (83)
4 d1nkpa_ a.38.1.1 (A:) Myc prot 99.6 1.9E-15 1.4E-19 111.5 6.2 67 50-116 4-73 (88)
5 d1a0aa_ a.38.1.1 (A:) Pho4 B/H 99.5 1.9E-15 1.4E-19 104.9 4.9 53 52-104 2-61 (63)
6 d1mdya_ a.38.1.1 (A:) Myod B/H 99.5 5.2E-15 3.8E-19 104.2 3.4 56 50-105 10-67 (68)
7 d1uklc_ a.38.1.1 (C:) SREBP-2 99.4 2.4E-14 1.8E-18 98.6 4.4 55 64-118 1-56 (61)
8 d1an4a_ a.38.1.1 (A:) Usf B/HL 99.4 2.5E-14 1.8E-18 99.7 2.9 53 51-103 4-62 (65)
9 d1u8sa1 d.58.18.5 (A:2-87) put 97.7 0.00018 1.3E-08 51.0 9.9 64 169-232 4-67 (86)
10 d1zpva1 d.58.18.7 (A:1-83) UPF 97.6 0.00038 2.8E-08 48.7 10.5 63 171-233 3-66 (83)
11 d1u8sa2 d.58.18.5 (A:88-180) p 96.7 0.0097 7.1E-07 42.1 10.4 66 170-235 6-80 (93)
12 d2f06a2 d.58.18.11 (A:1-70) Hy 96.0 0.01 7.6E-07 40.2 6.8 57 172-228 5-61 (70)
13 d2f06a1 d.58.18.11 (A:71-141) 95.8 0.016 1.2E-06 39.2 7.1 55 172-228 1-57 (71)
14 d1y7pa2 d.58.18.12 (A:2-78) Hy 95.3 0.014 1E-06 40.1 5.3 60 172-231 3-65 (77)
15 d2fgca2 d.58.18.6 (A:27-104) A 93.4 0.18 1.3E-05 34.5 7.7 62 170-231 3-66 (78)
16 d2pc6a2 d.58.18.6 (A:1-77) Ace 89.9 0.62 4.5E-05 31.6 7.1 60 172-231 4-65 (77)
17 d1sc6a3 d.58.18.1 (A:327-410) 89.4 0.94 6.8E-05 30.7 8.0 50 172-221 13-62 (84)
18 d2qmwa2 d.58.18.3 (A:185-264) 88.9 0.65 4.8E-05 31.5 6.8 45 177-221 9-54 (80)
19 d1phza1 d.58.18.3 (A:19-115) P 87.2 0.29 2.1E-05 34.7 4.1 51 171-221 17-68 (97)
20 d2f1fa1 d.58.18.6 (A:2-77) Ace 86.6 1 7.6E-05 30.3 6.5 61 172-232 3-65 (76)
21 d1ygya3 d.58.18.1 (A:452-529) 83.6 2.4 0.00018 28.1 7.4 50 172-221 5-54 (78)
22 d2joqa1 d.58.54.2 (A:4-89) Hyp 43.1 39 0.0029 22.0 7.2 53 169-221 14-66 (86)
23 d2qrra1 d.58.18.13 (A:2-98) Me 39.3 49 0.0036 22.0 7.7 40 181-221 33-72 (97)
24 d2clyb1 f.53.1.1 (B:4-123) ATP 37.4 24 0.0017 25.1 5.0 28 88-115 92-119 (120)
25 d2hmfa3 d.58.18.10 (A:304-403) 36.7 19 0.0014 24.6 4.1 35 168-202 13-50 (100)
26 d1lrza1 a.2.7.4 (A:245-309) Me 32.9 22 0.0016 22.7 3.6 24 95-118 3-26 (65)
27 d2cdqa2 d.58.18.10 (A:329-419) 31.0 67 0.0049 21.1 7.2 36 168-203 11-49 (91)
28 d2hmfa2 d.58.18.10 (A:404-470) 30.6 35 0.0025 21.4 4.4 25 179-203 13-37 (67)
29 d1vjla_ d.257.1.1 (A:) Hypothe 29.2 50 0.0037 24.1 5.8 40 179-218 54-94 (151)
30 d1mn3a_ a.5.2.4 (A:) Vacuolar 28.6 57 0.0041 19.9 5.0 24 58-81 3-26 (54)
31 d3dhxa1 d.58.18.13 (A:2-100) M 27.4 80 0.0058 20.9 6.4 41 180-221 33-73 (99)
32 d3ceda1 d.58.18.13 (A:247-341) 25.5 86 0.0062 20.6 8.1 39 181-220 31-69 (95)
33 d2j0wa3 d.58.18.10 (A:386-449) 23.7 52 0.0038 20.2 4.3 29 172-200 3-34 (64)
34 d1ufwa_ d.58.7.1 (A:) Synaptoj 23.6 29 0.0021 23.8 3.0 44 168-214 15-65 (95)
No 1
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=3.5e-16 Score=113.61 Aligned_cols=68 Identities=22% Similarity=0.516 Sum_probs=62.4
Q ss_pred CchhhhcchhHHHHHHHHHHHHHHHhccCCCC-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 025727 50 SSAASKNIVSERNRRKKLNERLFALRSVVPNI-SKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESG 117 (249)
Q Consensus 50 ~~~~~~h~~~ER~RR~~in~~~~~LrslvP~~-~k~dKasIl~~ai~yI~~Lq~~~~~L~~~~~~l~s~ 117 (249)
..+|..|+.+||+||++||+.|..|+++||+. .|++|++||..||+||+.|+.+++.|..+...|+..
T Consensus 4 ~~kR~~H~~~Er~RR~~in~~~~~L~~llP~~~~k~~K~~iL~~a~~yI~~L~~~~~~L~~e~~~lk~~ 72 (80)
T d1am9a_ 4 GEKRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTA 72 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999985 699999999999999999999999999998887643
No 2
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.2e-15 Score=110.40 Aligned_cols=65 Identities=26% Similarity=0.338 Sum_probs=59.6
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhccCCCC---CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025727 52 AASKNIVSERNRRKKLNERLFALRSVVPNI---SKMDKASIIKDAIDYIQELHEQEKRIRDEIMELES 116 (249)
Q Consensus 52 ~~~~h~~~ER~RR~~in~~~~~LrslvP~~---~k~dKasIl~~ai~yI~~Lq~~~~~L~~~~~~l~s 116 (249)
.|..|+..||+||++||+.|..|+++||.. .|++|++||..||+||+.|+.+++.|..++..|..
T Consensus 1 ~R~~Hn~~Er~RR~~in~~f~~L~~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~L~~ 68 (79)
T d1nlwa_ 1 SRSTHNEMEKNRRAHLRLSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDSDRKAVHQIDQLQR 68 (79)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999999999999999999999974 68999999999999999999999999998877753
No 3
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.5e-15 Score=108.88 Aligned_cols=65 Identities=26% Similarity=0.474 Sum_probs=60.0
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhccCCC--CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025727 52 AASKNIVSERNRRKKLNERLFALRSVVPN--ISKMDKASIIKDAIDYIQELHEQEKRIRDEIMELES 116 (249)
Q Consensus 52 ~~~~h~~~ER~RR~~in~~~~~LrslvP~--~~k~dKasIl~~ai~yI~~Lq~~~~~L~~~~~~l~s 116 (249)
+|..|+.+||+||.+||+.|..|+++||+ ..|++|++||..||+||+.|+.+++.|..+...+..
T Consensus 2 rR~~Hn~~Er~RR~~in~~f~~L~~llP~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~l~~ 68 (83)
T d1nkpb_ 2 KRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKR 68 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999996 478999999999999999999999999998877654
No 4
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.9e-15 Score=111.51 Aligned_cols=67 Identities=31% Similarity=0.484 Sum_probs=61.0
Q ss_pred CchhhhcchhHHHHHHHHHHHHHHHhccCCCC---CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025727 50 SSAASKNIVSERNRRKKLNERLFALRSVVPNI---SKMDKASIIKDAIDYIQELHEQEKRIRDEIMELES 116 (249)
Q Consensus 50 ~~~~~~h~~~ER~RR~~in~~~~~LrslvP~~---~k~dKasIl~~ai~yI~~Lq~~~~~L~~~~~~l~s 116 (249)
..+|..|+.+||+||++||+.|..|+++||+. .|++|++||..||+||+.|+++++.|..++..+..
T Consensus 4 ~~rR~~Hn~~Er~RR~~in~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~l~~ 73 (88)
T d1nkpa_ 4 NVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRK 73 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999963 67999999999999999999999999998877754
No 5
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.54 E-value=1.9e-15 Score=104.92 Aligned_cols=53 Identities=26% Similarity=0.423 Sum_probs=48.8
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhccCCC-------CCCCCcchHHHHHHHHHHHHHHHH
Q 025727 52 AASKNIVSERNRRKKLNERLFALRSVVPN-------ISKMDKASIIKDAIDYIQELHEQE 104 (249)
Q Consensus 52 ~~~~h~~~ER~RR~~in~~~~~LrslvP~-------~~k~dKasIl~~ai~yI~~Lq~~~ 104 (249)
+|..|+.+||+||++||+.|.+|+++||. ..|++|++||..||+||++||+++
T Consensus 2 rR~~H~~~Er~RR~~in~~~~~L~~llP~~~~~~~~~~k~sKa~iL~~Av~yI~~Lq~~v 61 (63)
T d1a0aa_ 2 KRESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNG 61 (63)
T ss_dssp CTTGGGGGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTCS
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCcccccHHHHHHHHHHHHHHHHHhh
Confidence 47889999999999999999999999994 478999999999999999999654
No 6
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48 E-value=5.2e-15 Score=104.21 Aligned_cols=56 Identities=25% Similarity=0.411 Sum_probs=50.8
Q ss_pred CchhhhcchhHHHHHHHHHHHHHHHhccCCCC--CCCCcchHHHHHHHHHHHHHHHHH
Q 025727 50 SSAASKNIVSERNRRKKLNERLFALRSVVPNI--SKMDKASIIKDAIDYIQELHEQEK 105 (249)
Q Consensus 50 ~~~~~~h~~~ER~RR~~in~~~~~LrslvP~~--~k~dKasIl~~ai~yI~~Lq~~~~ 105 (249)
..+|..|+..||+||.+||+.|..|+++||.+ .|+||++||..||+||++||+.++
T Consensus 10 ~~rR~~hn~~Er~Rr~~in~~~~~L~~llP~~~~~k~sK~~iL~~Ai~YI~~Lq~~l~ 67 (68)
T d1mdya_ 10 ADRRKAATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIEGLQALLR 67 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCTTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 45688999999999999999999999999984 688999999999999999997653
No 7
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=2.4e-14 Score=98.63 Aligned_cols=55 Identities=31% Similarity=0.610 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhccCCCC-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 025727 64 RKKLNERLFALRSVVPNI-SKMDKASIIKDAIDYIQELHEQEKRIRDEIMELESGK 118 (249)
Q Consensus 64 R~~in~~~~~LrslvP~~-~k~dKasIl~~ai~yI~~Lq~~~~~L~~~~~~l~s~~ 118 (249)
|++||++|.+||++||++ .|+||++||.+||+||+.||++++.|++++..|+...
T Consensus 1 R~~in~~f~~L~~lvP~~~~K~~Ka~iL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~ 56 (61)
T d1uklc_ 1 RSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLAN 56 (61)
T ss_dssp CCCHHHHHHHHHHHHSCSSCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999986 6999999999999999999999999999998887543
No 8
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=2.5e-14 Score=99.72 Aligned_cols=53 Identities=34% Similarity=0.550 Sum_probs=48.6
Q ss_pred chhhhcchhHHHHHHHHHHHHHHHhccCCCC------CCCCcchHHHHHHHHHHHHHHH
Q 025727 51 SAASKNIVSERNRRKKLNERLFALRSVVPNI------SKMDKASIIKDAIDYIQELHEQ 103 (249)
Q Consensus 51 ~~~~~h~~~ER~RR~~in~~~~~LrslvP~~------~k~dKasIl~~ai~yI~~Lq~~ 103 (249)
.+|..|+.+||+||++||+.|.+|+++||.. .|++|++||..|++||+.||++
T Consensus 4 ~rR~~H~~~Er~RR~~in~~f~~L~~lvP~~~~~~~~~k~sK~~iL~~av~yI~~Lq~~ 62 (65)
T d1an4a_ 4 KRRAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQS 62 (65)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTCCCTTTTTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999964 4899999999999999999865
No 9
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=97.67 E-value=0.00018 Score=50.96 Aligned_cols=64 Identities=13% Similarity=0.070 Sum_probs=56.1
Q ss_pred eeEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEecccchhhhhhhhhh
Q 025727 169 KILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFSLFFSTYHH 232 (249)
Q Consensus 169 ~~~~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~~~~~l~~~~~~ 232 (249)
..++|.+.|+++||++.+|..+|-+.|.+|+.++....++.+...+.+.++.+.+.+|...+..
T Consensus 4 ~~~vitv~G~DrpGiva~vt~~l~~~g~NI~d~~~~~~~~~~~~~~~v~~~~~~~~~l~~~L~~ 67 (86)
T d1u8sa1 4 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSPSNITRVETTLPL 67 (86)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECHHHHHHHHHHHHH
T ss_pred cEEEEEEEeCCCChHHHHHHHHHHHCCCeEEEeEeEEECCeeEEEEEEEcCcccHHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999999999887766666655443
No 10
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.59 E-value=0.00038 Score=48.72 Aligned_cols=63 Identities=11% Similarity=0.135 Sum_probs=54.2
Q ss_pred EEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEeccc-chhhhhhhhhhh
Q 025727 171 LVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL-FFSLFFSTYHHQ 233 (249)
Q Consensus 171 ~~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~-~~~~l~~~~~~~ 233 (249)
++|.+.|++++|++..|..+|-+.|..|+..+-.+.++.+.-.+.+.++.. .+..|+..+...
T Consensus 3 ~vitv~g~DrpGiVa~vt~~l~~~g~NI~d~~q~~~~~~f~~~~~v~~~~~~~~~~l~~~l~~l 66 (83)
T d1zpva1 3 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLRNEFEAF 66 (83)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHCCCeEEEEEeEEeCCEEEEEEEEEEecCCCHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999988888888765 456666665543
No 11
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=96.68 E-value=0.0097 Score=42.14 Aligned_cols=66 Identities=8% Similarity=0.042 Sum_probs=48.9
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCC--------EEEEEEEEEeccc-chhhhhhhhhhhhh
Q 025727 170 ILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAG--------RLLKTAFIEVRFL-FFSLFFSTYHHQLF 235 (249)
Q Consensus 170 ~~~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~--------~vl~ti~vev~~~-~~~~l~~~~~~~~~ 235 (249)
.+.|.|.|+++||++.+|..+|-++|+.|...+..+..+ .+.-.+.+.++.+ .+..|++.+.....
T Consensus 6 tv~v~v~g~DrpGIV~~it~~la~~~~nI~~l~t~~~~a~~~~~~~~~f~~~~~~~~p~~~~~~~l~~~l~~l~~ 80 (93)
T d1u8sa2 6 TVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCT 80 (93)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHcCCCchhhhcccccccCCcccCccEEEEEEEEcCccccHHHHHHHHHHHHH
Confidence 567889999999999999999999999999988765432 3444566666554 45667666655443
No 12
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=95.99 E-value=0.01 Score=40.21 Aligned_cols=57 Identities=7% Similarity=0.069 Sum_probs=47.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEecccchhhhhh
Q 025727 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFLFFSLFFS 228 (249)
Q Consensus 172 ~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~~~~~l~~ 228 (249)
.|+|..+++||.|.+|..+|...|+.|.+.++....+.-+..|.+.-.+.+...|++
T Consensus 5 QisV~~eNkpG~L~~v~~~~~~~~inI~sl~v~~t~~~~i~Riiv~~~e~a~~~L~~ 61 (70)
T d2f06a2 5 QLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVSDPDKAYKALKD 61 (70)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEEEEEeCCCcHHHHHHHHHHHCCCCEEEEEEeecCCCCEEEEEECChHHHHHHHHH
Confidence 378999999999999999999999999999999888888877766544445555544
No 13
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=95.81 E-value=0.016 Score=39.21 Aligned_cols=55 Identities=11% Similarity=0.033 Sum_probs=42.9
Q ss_pred EEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEeccc--chhhhhh
Q 025727 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL--FFSLFFS 228 (249)
Q Consensus 172 ~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~--~~~~l~~ 228 (249)
+|.|..++++|.|.+++++|.+.|++|........+++-+-.|. +++. +...|++
T Consensus 1 ViaV~v~d~pG~L~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~--vdd~~~a~~~L~~ 57 (71)
T d2f06a1 1 VVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIR--PSNMDKCIEVLKE 57 (71)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEE--ESCHHHHHHHHHH
T ss_pred CEEEEecCCccHHHHHHHHHHHCCCCEEEEEEEcCCCcEEEEEE--ECCHHHHHHHHHH
Confidence 47788899999999999999999999999988888887654444 4443 4444443
No 14
>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.30 E-value=0.014 Score=40.11 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=38.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEe-eCCEE--EEEEEEEecccchhhhhhhhh
Q 025727 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANITA-VAGRL--LKTAFIEVRFLFFSLFFSTYH 231 (249)
Q Consensus 172 ~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~-~~~~v--l~ti~vev~~~~~~~l~~~~~ 231 (249)
-|+|.|.+++|+|.+|+.++-+.+..|.+.+... .+|.. ..+|.++..+..+..+-+.+.
T Consensus 3 ~i~i~~~Dr~GlL~di~~~ia~~~~NI~~i~~~~~~~g~~~~~~~i~v~~~~~~l~~ll~kL~ 65 (77)
T d1y7pa2 3 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVK 65 (77)
T ss_dssp EEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHH
T ss_pred eEEEEEecCCChHHHHHHHHHHcCCCeEEEEeeccCCCeEEEEEEEEEEcCcccHHHHHHHHH
Confidence 4889999999999999999999999999998664 34333 335555544423555544443
No 15
>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=93.42 E-value=0.18 Score=34.53 Aligned_cols=62 Identities=11% Similarity=0.052 Sum_probs=46.7
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEe--eCCEEEEEEEEEecccchhhhhhhhh
Q 025727 170 ILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITA--VAGRLLKTAFIEVRFLFFSLFFSTYH 231 (249)
Q Consensus 170 ~~~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~--~~~~vl~ti~vev~~~~~~~l~~~~~ 231 (249)
...|.+...+++|.|.+|..+|...|..+.+-++.. ..|...-||.++.++..+.++..-+.
T Consensus 3 ~~tisvlv~n~pGvL~Ri~~lF~rRg~NI~SL~v~~te~~~iSR~tivv~g~~~~i~qi~kQl~ 66 (78)
T d2fgca2 3 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAY 66 (78)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHT
T ss_pred eEEEEEEEeCCCcHHHHHHHHHhhCCcceEEEEEeecCCCCeEEEEEEEEcCHHHHHHHHHHHh
Confidence 356888999999999999999999998777766554 44555568888888776666544433
No 16
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=89.86 E-value=0.62 Score=31.60 Aligned_cols=60 Identities=7% Similarity=0.015 Sum_probs=44.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHhCCC--eEEEEEEEeeCCEEEEEEEEEecccchhhhhhhhh
Q 025727 172 VVSVTCSKRTDTMVKLCEAFESLKL--KIITANITAVAGRLLKTAFIEVRFLFFSLFFSTYH 231 (249)
Q Consensus 172 ~I~I~C~~~~g~L~~Il~aLesl~L--~Vvsa~is~~~~~vl~ti~vev~~~~~~~l~~~~~ 231 (249)
.|.+.-+++||.|.+|..+|...|. +-+++.-+...|....||.+..++..+.++..-+.
T Consensus 4 tisv~veN~pGvL~Ris~lF~rRg~NI~Sltv~~te~~~iSRmtivv~~~~~~i~qi~kQL~ 65 (77)
T d2pc6a2 4 IISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLN 65 (77)
T ss_dssp EEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHH
T ss_pred EEEEEEECCccHHHHHHHHHhccCcceEEEEEeccCCCCeEEEEEEEECCHHHHHHHHHHHh
Confidence 5778888999999999999976665 55555555666777779998888876655544333
No 17
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=89.43 E-value=0.94 Score=30.66 Aligned_cols=50 Identities=14% Similarity=0.035 Sum_probs=42.0
Q ss_pred EEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEeccc
Q 025727 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL 221 (249)
Q Consensus 172 ~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~ 221 (249)
.+-+.-.++||.+.+|..+|-+.|+.|.+-.....++.-...+.++++..
T Consensus 13 rl~i~~~d~PGvla~I~~~l~~~~iNI~~~~~~~~~~~~~a~~~i~~D~~ 62 (84)
T d1sc6a3 13 RLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADED 62 (84)
T ss_dssp EEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEECCHH
T ss_pred EEEEEeCCcCCHHHHHHHHHHHcCCCHHHhccccCCCCcEEEEEEECCCC
Confidence 45556688999999999999999999999988888877666777788765
No 18
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=88.93 E-value=0.65 Score=31.45 Aligned_cols=45 Identities=7% Similarity=0.131 Sum_probs=38.8
Q ss_pred cCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEE-EEEEEEeccc
Q 025727 177 CSKRTDTMVKLCEAFESLKLKIITANITAVAGRLL-KTAFIEVRFL 221 (249)
Q Consensus 177 C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl-~ti~vev~~~ 221 (249)
-.++||.|.++|.++...|++..+-.+-+..+..+ |.|.+++++.
T Consensus 9 ~~d~pGaL~~vL~~F~~~~INLt~IeSRP~~~~~~~Y~F~id~~g~ 54 (80)
T d2qmwa2 9 MHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSA 54 (80)
T ss_dssp SSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEESCC
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEEecC
Confidence 45689999999999999999999999988887764 5888999765
No 19
>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=87.19 E-value=0.29 Score=34.65 Aligned_cols=51 Identities=8% Similarity=0.046 Sum_probs=40.7
Q ss_pred EEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEE-EEEEEEEeccc
Q 025727 171 LVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRL-LKTAFIEVRFL 221 (249)
Q Consensus 171 ~~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~v-l~ti~vev~~~ 221 (249)
.-|-+.+.+++|.|.++|.+|...|+...+-.+-+..+.. -|.|.+++++.
T Consensus 17 tSl~f~~~~~pGaL~~vL~~f~~~~INLt~IeSRP~~~~~~~Y~F~id~eg~ 68 (97)
T d1phza1 17 ISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKR 68 (97)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBCGG
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHCCCCEEEEEeeccCCCCceEEEEEEcccC
Confidence 3445556788999999999999999988888877666555 56899999765
No 20
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=86.62 E-value=1 Score=30.34 Aligned_cols=61 Identities=10% Similarity=0.029 Sum_probs=42.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEE--eeCCEEEEEEEEEecccchhhhhhhhhh
Q 025727 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANIT--AVAGRLLKTAFIEVRFLFFSLFFSTYHH 232 (249)
Q Consensus 172 ~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is--~~~~~vl~ti~vev~~~~~~~l~~~~~~ 232 (249)
.|.+.-++++|.|.+|..+|...|..|.+-++. -..+...-||.+..++..+.++..-+..
T Consensus 3 tlsv~v~N~~GVL~RisglF~rRg~NI~Sl~v~~te~~~iSR~tivv~~~~~~i~qi~kQL~K 65 (76)
T d2f1fa1 3 ILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHK 65 (76)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEEEECCCcHHHHHHHHHHhcCcceEEEEEcccCCCCeeEEEEEEECCHHHHHHHHHHHhC
Confidence 467777889999999999998887665555554 4455555577777777655555444433
No 21
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=83.57 E-value=2.4 Score=28.10 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=36.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEeccc
Q 025727 172 VVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL 221 (249)
Q Consensus 172 ~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~ 221 (249)
.+-+.-.++||.+.+|-.+|-+.|+.|....+++....-.....++++..
T Consensus 5 ~L~i~~~D~PGvi~~I~~~l~~~~iNI~~m~~~~~~~g~~a~~vi~vD~~ 54 (78)
T d1ygya3 5 NLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD 54 (78)
T ss_dssp EEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC
T ss_pred EEEEEeCCcCCHHHHHHHHHHhcCcChhhheeeecCCCCeEEEEEEcCCC
Confidence 45566688999999999999999999999887654333233444455555
No 22
>d2joqa1 d.58.54.2 (A:4-89) Hypothetical protein HP0495 {Helicobacter pylori [TaxId: 210]}
Probab=43.11 E-value=39 Score=22.03 Aligned_cols=53 Identities=13% Similarity=-0.052 Sum_probs=44.1
Q ss_pred eeEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEeccc
Q 025727 169 KILVVSVTCSKRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL 221 (249)
Q Consensus 169 ~~~~I~I~C~~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~ 221 (249)
.++.++|-.....+.+..++..+............|..|..+-.++.+.|...
T Consensus 14 c~y~~KvIg~~~~~~~~~~~~~~~~~~~~~~~~k~Ss~GkY~Svtv~v~v~s~ 66 (86)
T d2joqa1 14 CLWDYRVIMTTKDTSTLKELLETYQRPFKLEFKNTSKNAKFYSFNVSMEVSNE 66 (86)
T ss_dssp EEEEEEEEESCSCCCHHHHHHHTTTCCEEEEEEEECTTSCCEEEEEEEEESSH
T ss_pred cccEEEEEEecCcccceeeEEEEeccCCCCCccccCCCCcEEEEEEEEEECCH
Confidence 35677887877788889999999998888887788888888888999999875
No 23
>d2qrra1 d.58.18.13 (A:2-98) Methionine import ATP-binding protein MetN {Vibrio parahaemolyticus [TaxId: 670]}
Probab=39.25 E-value=49 Score=22.03 Aligned_cols=40 Identities=10% Similarity=0.216 Sum_probs=32.1
Q ss_pred CChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEeccc
Q 025727 181 TDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL 221 (249)
Q Consensus 181 ~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~ 221 (249)
.-+++++++.+ ....+|+.+++...+|..+-.+.+++.++
T Consensus 33 ~Pvis~l~~~~-~i~vnIL~g~i~~i~~~~~G~Lil~l~G~ 72 (97)
T d2qrra1 33 APLMSQISRKY-NIDVSILSSDLDYAGGVKFGMMVAELFGN 72 (97)
T ss_dssp SCHHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred chHHHHHHHHH-CCCeEEEEEeeEEeCCeeEEEEEEEEECC
Confidence 44666666554 45578999999999999999999999876
No 24
>d2clyb1 f.53.1.1 (B:4-123) ATP synthase subunit d, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=37.43 E-value=24 Score=25.15 Aligned_cols=28 Identities=7% Similarity=0.279 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025727 88 SIIKDAIDYIQELHEQEKRIRDEIMELE 115 (249)
Q Consensus 88 sIl~~ai~yI~~Lq~~~~~L~~~~~~l~ 115 (249)
..+.++-+|+...+.++++|+.+++.++
T Consensus 92 e~~~~~~~~~~~s~~rI~~lekeLe~ik 119 (120)
T d2clyb1 92 EDVKSCAEFLTQSKTRIQEYEKELEKMR 119 (120)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4488889999999999999999988775
No 25
>d2hmfa3 d.58.18.10 (A:304-403) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=36.65 E-value=19 Score=24.58 Aligned_cols=35 Identities=9% Similarity=0.256 Sum_probs=28.3
Q ss_pred ceeEEEEEEcC---CCCChHHHHHHHHHhCCCeEEEEE
Q 025727 168 EKILVVSVTCS---KRTDTMVKLCEAFESLKLKIITAN 202 (249)
Q Consensus 168 ~~~~~I~I~C~---~~~g~L~~Il~aLesl~L~Vvsa~ 202 (249)
++...|.+... ..+|.+.+|+.+|.+.|+.|.-.+
T Consensus 13 ~nva~IsivG~~m~~~~Gi~arif~~La~~~InV~mIs 50 (100)
T d2hmfa3 13 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILIS 50 (100)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEEEECCCCCCCcchHHHHHHHHHHcCCCHHHee
Confidence 45678888764 468999999999999998877654
No 26
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=32.93 E-value=22 Score=22.71 Aligned_cols=24 Identities=21% Similarity=0.429 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Q 025727 95 DYIQELHEQEKRIRDEIMELESGK 118 (249)
Q Consensus 95 ~yI~~Lq~~~~~L~~~~~~l~s~~ 118 (249)
+||..|+.+...|..++..++...
T Consensus 3 eYl~~L~~~~~~L~~~i~k~~~~l 26 (65)
T d1lrza1 3 EYIKELNEERDILNKDLNKALKDI 26 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999998876553
No 27
>d2cdqa2 d.58.18.10 (A:329-419) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=31.04 E-value=67 Score=21.14 Aligned_cols=36 Identities=11% Similarity=0.299 Sum_probs=29.9
Q ss_pred ceeEEEEEEcC---CCCChHHHHHHHHHhCCCeEEEEEE
Q 025727 168 EKILVVSVTCS---KRTDTMVKLCEAFESLKLKIITANI 203 (249)
Q Consensus 168 ~~~~~I~I~C~---~~~g~L~~Il~aLesl~L~Vvsa~i 203 (249)
.+..+|+|.-. .++|.+.+|+.+|.+.|+.|.-.+.
T Consensus 11 ~~ia~i~v~g~~m~~~~G~~a~if~~La~~~Inv~~Is~ 49 (91)
T d2cdqa2 11 RNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVAT 49 (91)
T ss_dssp EEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEEEEeCCCCCCccHHHHHHHHHHHcCCcEEEEEe
Confidence 45678888754 6899999999999999998887764
No 28
>d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=30.57 E-value=35 Score=21.37 Aligned_cols=25 Identities=12% Similarity=-0.043 Sum_probs=21.0
Q ss_pred CCCChHHHHHHHHHhCCCeEEEEEE
Q 025727 179 KRTDTMVKLCEAFESLKLKIITANI 203 (249)
Q Consensus 179 ~~~g~L~~Il~aLesl~L~Vvsa~i 203 (249)
.++|.+.+++.+|.+.|+.|.=.+-
T Consensus 13 ~~~gi~arif~~L~~~~InV~mIsq 37 (67)
T d2hmfa2 13 GAKGIAGKIFTAVSESGANIKMIAQ 37 (67)
T ss_dssp TCTTHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCccHHHHHHHHHHHcCCChHHeee
Confidence 5799999999999999988865543
No 29
>d1vjla_ d.257.1.1 (A:) Hypothetical protein TM0160 {Thermotoga maritima [TaxId: 2336]}
Probab=29.23 E-value=50 Score=24.10 Aligned_cols=40 Identities=23% Similarity=0.180 Sum_probs=30.9
Q ss_pred CCCChHHHHHHHHHhCCCeEEEEEEEee-CCEEEEEEEEEe
Q 025727 179 KRTDTMVKLCEAFESLKLKIITANITAV-AGRLLKTAFIEV 218 (249)
Q Consensus 179 ~~~g~L~~Il~aLesl~L~Vvsa~is~~-~~~vl~ti~vev 218 (249)
.||...-=+..+|+.+|.+|..+.|+.. +|.++..++++-
T Consensus 54 ~RP~thDLl~~~l~~lg~~v~~V~I~~~~dg~fyA~L~l~~ 94 (151)
T d1vjla_ 54 PRPLTHDLLLSVLESLEARVDKVIIHSLKDNTFYATLVIRD 94 (151)
T ss_dssp SSCCHHHHHHHHHHHTTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHhCCEEEEEEEEEEecCCeEEEEEEec
Confidence 4676666677778999999999999986 665666888763
No 30
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.64 E-value=57 Score=19.86 Aligned_cols=24 Identities=13% Similarity=0.375 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHHHHHHhccCCCC
Q 025727 58 VSERNRRKKLNERLFALRSVVPNI 81 (249)
Q Consensus 58 ~~ER~RR~~in~~~~~LrslvP~~ 81 (249)
.++|-+|...++.+..|+.+.|+.
T Consensus 3 ~i~~i~~~e~~e~~~~Lk~MFP~~ 26 (54)
T d1mn3a_ 3 LIKKIEENERKDTLNTLQNMFPDM 26 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC
Confidence 467888999999999999999985
No 31
>d3dhxa1 d.58.18.13 (A:2-100) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=27.38 E-value=80 Score=20.89 Aligned_cols=41 Identities=15% Similarity=0.204 Sum_probs=32.3
Q ss_pred CCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEeccc
Q 025727 180 RTDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRFL 221 (249)
Q Consensus 180 ~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~~ 221 (249)
..-+++++.+.+ ....+|+.+++...+|..+-.+.+++.++
T Consensus 33 ~~Piis~l~~~~-~v~vnIL~g~i~~i~~~~~G~Lil~l~g~ 73 (99)
T d3dhxa1 33 DAPLLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEMHGT 73 (99)
T ss_dssp TCCHHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred CccHHHHHHHHh-CCceEEEEEeeEEeCCeeEEEEEEEeeCC
Confidence 344666666554 44578999999999999999999999876
No 32
>d3ceda1 d.58.18.13 (A:247-341) Methionine import ATP-binding protein MetN2 {Staphylococcus aureus [TaxId: 1280]}
Probab=25.54 E-value=86 Score=20.62 Aligned_cols=39 Identities=18% Similarity=0.371 Sum_probs=33.7
Q ss_pred CChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEEEEEecc
Q 025727 181 TDTMVKLCEAFESLKLKIITANITAVAGRLLKTAFIEVRF 220 (249)
Q Consensus 181 ~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti~vev~~ 220 (249)
.-+++++.+-+ .....|+.|++...++..+-.+.+++.+
T Consensus 31 ~Pvis~l~r~~-~v~vnIL~g~I~~i~~~~~G~Liv~l~G 69 (95)
T d3ceda1 31 EPIVSSLSTAY-DIKINILEANIKNTKNGTVGFLVLHIPY 69 (95)
T ss_dssp HHHHHHHHHHH-TCCCEEEEEEEEEETTEEEEEEEEEESC
T ss_pred chHHHHHHHHh-CCceEEEEEEeEEeCCeeEEEEEEEEec
Confidence 44677777777 7789999999999999999999999976
No 33
>d2j0wa3 d.58.18.10 (A:386-449) Aspartokinase {Escherichia coli [TaxId: 562]}
Probab=23.68 E-value=52 Score=20.19 Aligned_cols=29 Identities=14% Similarity=0.291 Sum_probs=22.7
Q ss_pred EEEEEcC---CCCChHHHHHHHHHhCCCeEEE
Q 025727 172 VVSVTCS---KRTDTMVKLCEAFESLKLKIIT 200 (249)
Q Consensus 172 ~I~I~C~---~~~g~L~~Il~aLesl~L~Vvs 200 (249)
+|.+... ..+|...+++.+|.+.++.+++
T Consensus 3 ~IsvvG~gm~~~~gi~arif~~L~~~nI~~i~ 34 (64)
T d2j0wa3 3 LVALIGNDLSKACGVGKEVFGVLEPFNIRMIC 34 (64)
T ss_dssp EEEEEESSCTTSSSHHHHHHSSCTTSCCCEEE
T ss_pred EEEEECCCcccCccHHHHHHHHHhhCCCeEEE
Confidence 3455444 4799999999999998888875
No 34
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.58 E-value=29 Score=23.79 Aligned_cols=44 Identities=23% Similarity=0.313 Sum_probs=31.6
Q ss_pred ceeEEEEEEcC-------CCCChHHHHHHHHHhCCCeEEEEEEEeeCCEEEEEE
Q 025727 168 EKILVVSVTCS-------KRTDTMVKLCEAFESLKLKIITANITAVAGRLLKTA 214 (249)
Q Consensus 168 ~~~~~I~I~C~-------~~~g~L~~Il~aLesl~L~Vvsa~is~~~~~vl~ti 214 (249)
+..++|+|..+ -...++..+++.|.+.| +|+-+.+ +++.++-||
T Consensus 15 DgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~G-eViLvRF--v~d~mwVTF 65 (95)
T d1ufwa_ 15 DATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYG-TIVLVRI--NQGQMLVTF 65 (95)
T ss_dssp TCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHS-CCSEEEE--ETTEEEEEC
T ss_pred CcEEEEEeccCCccccccCCHHHHHHHHHHHhhCC-eEEEEEE--eCCeEEEEE
Confidence 45777888652 13568999999999999 6777665 456555554
Done!