Query 025730
Match_columns 249
No_of_seqs 300 out of 2305
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:55:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025730.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025730hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03026 histidinol-phosphate 100.0 2.5E-29 5.5E-34 229.0 21.2 185 58-242 15-199 (380)
2 COG0079 HisC Histidinol-phosph 100.0 1.2E-28 2.6E-33 222.2 18.0 168 68-245 3-172 (356)
3 PRK01533 histidinol-phosphate 100.0 3.4E-28 7.3E-33 220.6 20.5 169 69-241 5-174 (366)
4 COG0436 Aspartate/tyrosine/aro 100.0 4.5E-28 9.7E-33 221.5 19.3 154 95-249 28-196 (393)
5 PRK14809 histidinol-phosphate 99.9 3.2E-26 6.9E-31 206.6 20.5 171 70-242 5-178 (357)
6 KOG0257 Kynurenine aminotransf 99.9 2.9E-26 6.2E-31 203.9 17.2 162 83-249 23-205 (420)
7 PRK13355 bifunctional HTH-doma 99.9 4.9E-26 1.1E-30 215.1 19.3 181 67-249 119-314 (517)
8 PRK01688 histidinol-phosphate 99.9 1.4E-25 3.1E-30 202.2 18.5 164 64-243 6-170 (351)
9 PRK05166 histidinol-phosphate 99.9 3.1E-25 6.7E-30 201.3 20.0 172 66-240 9-181 (371)
10 PRK03158 histidinol-phosphate 99.9 2.6E-25 5.5E-30 200.6 19.2 169 69-241 5-174 (359)
11 PRK07681 aspartate aminotransf 99.9 3.1E-25 6.8E-30 203.1 19.3 159 90-249 27-199 (399)
12 PRK04870 histidinol-phosphate 99.9 3.1E-25 6.8E-30 199.9 19.0 147 95-241 26-176 (356)
13 PRK09147 succinyldiaminopimela 99.9 3.2E-25 6.9E-30 202.7 18.9 156 93-249 27-199 (396)
14 PRK09105 putative aminotransfe 99.9 2.5E-25 5.5E-30 202.0 17.6 147 94-242 42-189 (370)
15 PRK00950 histidinol-phosphate 99.9 8.8E-25 1.9E-29 197.0 20.8 182 66-249 5-188 (361)
16 PRK07366 succinyldiaminopimela 99.9 6.9E-25 1.5E-29 199.9 19.5 156 93-249 28-198 (388)
17 PRK03317 histidinol-phosphate 99.9 6.9E-25 1.5E-29 198.6 18.6 150 96-246 27-187 (368)
18 PLN02368 alanine transaminase 99.9 3.3E-25 7.1E-30 203.6 16.2 182 67-249 11-243 (407)
19 PRK07392 threonine-phosphate d 99.9 1.4E-24 3.1E-29 196.1 19.4 166 79-248 6-177 (360)
20 PRK08056 threonine-phosphate d 99.9 1.1E-24 2.4E-29 196.6 18.3 167 79-249 4-175 (356)
21 PRK02610 histidinol-phosphate 99.9 9.3E-25 2E-29 198.4 17.6 170 67-241 5-191 (374)
22 PRK06290 aspartate aminotransf 99.9 1.8E-24 4E-29 198.9 19.8 156 93-249 42-212 (410)
23 PRK14807 histidinol-phosphate 99.9 3E-24 6.4E-29 193.5 20.6 170 66-248 5-177 (351)
24 PRK05387 histidinol-phosphate 99.9 1.7E-24 3.7E-29 194.6 18.8 143 95-242 24-168 (353)
25 PRK08960 hypothetical protein; 99.9 1.6E-24 3.5E-29 197.5 18.8 163 86-249 23-198 (387)
26 PRK02731 histidinol-phosphate 99.9 2.5E-24 5.3E-29 194.7 19.5 176 66-246 5-181 (367)
27 PRK09276 LL-diaminopimelate am 99.9 2.5E-24 5.5E-29 195.9 19.3 179 69-249 6-199 (385)
28 TIGR03538 DapC_gpp succinyldia 99.9 1.9E-24 4.1E-29 197.5 18.3 155 94-249 27-198 (393)
29 PLN00143 tyrosine/nicotianamin 99.9 2.8E-24 6E-29 197.6 18.9 156 93-249 30-203 (409)
30 PRK04635 histidinol-phosphate 99.9 2.3E-24 5.1E-29 194.3 17.9 160 66-242 11-171 (354)
31 PLN02187 rooty/superroot1 99.9 5.4E-24 1.2E-28 198.5 20.0 156 93-249 64-237 (462)
32 PTZ00377 alanine aminotransfer 99.9 2.1E-24 4.6E-29 202.3 17.1 182 67-249 10-251 (481)
33 PRK06358 threonine-phosphate d 99.9 6.1E-24 1.3E-28 191.8 19.1 167 79-249 3-174 (354)
34 PRK03967 histidinol-phosphate 99.9 7.1E-24 1.5E-28 190.2 19.4 163 67-246 2-167 (337)
35 PRK08068 transaminase; Reviewe 99.9 6E-24 1.3E-28 193.9 19.2 155 94-249 31-200 (389)
36 COG1168 MalY Bifunctional PLP- 99.9 3E-24 6.5E-29 189.4 15.9 154 95-249 25-191 (388)
37 PRK06348 aspartate aminotransf 99.9 2.3E-23 4.9E-28 189.9 21.0 154 95-249 29-195 (384)
38 PRK05942 aspartate aminotransf 99.9 1.3E-23 2.9E-28 192.0 18.9 162 87-249 27-203 (394)
39 PLN00175 aminotransferase fami 99.9 4.1E-23 8.9E-28 190.1 21.8 154 95-249 54-220 (413)
40 TIGR03540 DapC_direct LL-diami 99.9 2E-23 4.4E-28 189.9 19.5 156 93-249 27-197 (383)
41 PRK09265 aminotransferase AlaT 99.9 2.6E-23 5.6E-28 190.7 20.2 156 93-249 31-201 (404)
42 PRK08153 histidinol-phosphate 99.9 1.6E-23 3.4E-28 190.1 18.2 147 95-242 32-179 (369)
43 PRK07337 aminotransferase; Val 99.9 2.2E-23 4.9E-28 190.0 19.2 159 90-249 25-196 (388)
44 PTZ00433 tyrosine aminotransfe 99.9 1.9E-23 4.2E-28 192.1 18.5 156 93-249 31-210 (412)
45 TIGR03537 DapC succinyldiamino 99.9 3E-23 6.5E-28 186.8 18.3 152 97-249 2-169 (350)
46 PRK03321 putative aminotransfe 99.9 3E-23 6.5E-28 186.7 18.3 151 95-247 22-173 (352)
47 PLN00145 tyrosine/nicotianamin 99.9 5.3E-23 1.1E-27 190.4 20.4 155 94-249 51-223 (430)
48 TIGR01141 hisC histidinol-phos 99.9 3.2E-23 6.9E-28 185.9 18.2 152 94-247 18-170 (346)
49 PRK06207 aspartate aminotransf 99.9 4.3E-23 9.4E-28 189.5 19.0 155 94-249 38-211 (405)
50 PLN02656 tyrosine transaminase 99.9 4.8E-23 1E-27 189.4 19.3 156 93-249 29-202 (409)
51 PRK07550 hypothetical protein; 99.9 4.9E-23 1.1E-27 187.7 19.0 157 92-249 26-196 (386)
52 PLN02450 1-aminocyclopropane-1 99.9 1.1E-23 2.3E-28 196.8 14.3 156 93-249 36-224 (468)
53 PRK08636 aspartate aminotransf 99.9 9.7E-23 2.1E-27 186.9 19.9 164 86-249 24-208 (403)
54 TIGR01264 tyr_amTase_E tyrosin 99.9 1E-22 2.2E-27 186.5 19.5 155 94-249 30-201 (401)
55 PRK07324 transaminase; Validat 99.9 2.2E-23 4.7E-28 189.5 14.8 158 90-249 21-186 (373)
56 PRK12414 putative aminotransfe 99.9 1.1E-22 2.4E-27 185.4 19.0 154 95-249 29-195 (384)
57 PRK08363 alanine aminotransfer 99.9 1.5E-22 3.3E-27 185.2 19.8 158 91-249 26-199 (398)
58 PRK07682 hypothetical protein; 99.9 1.3E-22 2.9E-27 184.2 18.9 154 95-249 20-187 (378)
59 PRK09148 aminotransferase; Val 99.9 1.5E-22 3.3E-27 185.9 19.2 156 93-249 28-198 (405)
60 PRK05839 hypothetical protein; 99.9 1.1E-22 2.4E-27 184.8 18.0 161 85-249 13-188 (374)
61 PRK06108 aspartate aminotransf 99.9 1.7E-22 3.8E-27 183.3 19.1 154 95-249 24-191 (382)
62 PRK06855 aminotransferase; Val 99.9 1.6E-22 3.5E-27 187.2 18.8 156 93-249 30-204 (433)
63 PRK06225 aspartate aminotransf 99.9 2.7E-22 5.9E-27 182.4 19.6 155 94-249 27-190 (380)
64 PRK08361 aspartate aminotransf 99.9 2.9E-22 6.4E-27 182.9 19.1 154 95-249 33-199 (391)
65 PRK06425 histidinol-phosphate 99.9 2.3E-22 5.1E-27 179.9 18.0 137 96-249 17-155 (332)
66 PRK07590 L,L-diaminopimelate a 99.9 1.3E-22 2.8E-27 186.4 16.3 148 94-249 33-209 (409)
67 PRK05764 aspartate aminotransf 99.9 3.8E-22 8.2E-27 181.9 19.2 163 86-249 22-197 (393)
68 PRK04781 histidinol-phosphate 99.9 3.3E-22 7.1E-27 181.2 18.3 162 66-242 11-176 (364)
69 PLN02376 1-aminocyclopropane-1 99.9 7.1E-23 1.5E-27 192.4 14.5 157 93-249 44-232 (496)
70 PRK15481 transcriptional regul 99.9 1E-22 2.2E-27 188.3 15.3 152 95-248 85-244 (431)
71 PRK08912 hypothetical protein; 99.9 3.9E-22 8.5E-27 181.8 18.9 154 95-249 26-192 (387)
72 PRK14808 histidinol-phosphate 99.9 2.6E-22 5.7E-27 180.0 17.4 140 94-243 18-163 (335)
73 PRK07568 aspartate aminotransf 99.9 5.8E-22 1.3E-26 181.0 19.4 154 95-249 30-195 (397)
74 PRK05957 aspartate aminotransf 99.9 6.1E-22 1.3E-26 180.8 19.4 154 95-249 27-193 (389)
75 PRK07309 aromatic amino acid a 99.9 8.1E-22 1.7E-26 180.1 19.5 155 95-249 30-199 (391)
76 PRK06959 putative threonine-ph 99.9 1.6E-22 3.5E-27 181.6 13.7 149 76-242 5-154 (339)
77 PRK09257 aromatic amino acid a 99.9 1.1E-21 2.4E-26 179.5 19.1 155 95-249 26-205 (396)
78 PRK07908 hypothetical protein; 99.9 7.6E-22 1.7E-26 177.5 17.6 145 94-247 21-167 (349)
79 TIGR03542 DAPAT_plant LL-diami 99.9 2.6E-22 5.6E-27 184.0 14.6 149 94-249 32-206 (402)
80 PRK06836 aspartate aminotransf 99.9 1.7E-21 3.7E-26 178.2 19.2 152 95-247 33-199 (394)
81 PRK09082 methionine aminotrans 99.9 3.7E-21 8E-26 175.5 21.1 154 95-249 30-196 (386)
82 PRK07683 aminotransferase A; V 99.9 2.2E-21 4.7E-26 177.1 19.6 154 95-249 28-194 (387)
83 PLN02672 methionine S-methyltr 99.9 1.7E-21 3.8E-26 193.8 20.2 181 58-249 671-862 (1082)
84 PRK06107 aspartate aminotransf 99.9 3.3E-21 7.2E-26 176.7 20.0 154 94-248 32-198 (402)
85 KOG0259 Tyrosine aminotransfer 99.9 1.7E-21 3.7E-26 171.5 16.5 154 95-249 61-232 (447)
86 PLN02231 alanine transaminase 99.9 1.5E-21 3.2E-26 184.8 17.4 154 95-249 129-304 (534)
87 TIGR01265 tyr_nico_aTase tyros 99.9 3.9E-21 8.3E-26 176.3 19.6 156 93-249 29-202 (403)
88 PRK09275 aspartate aminotransf 99.9 1.3E-21 2.8E-26 184.0 16.5 150 96-247 101-272 (527)
89 PTZ00376 aspartate aminotransf 99.9 3E-21 6.4E-26 177.2 17.9 155 95-249 29-209 (404)
90 PLN02607 1-aminocyclopropane-1 99.9 1.3E-21 2.8E-26 181.9 14.8 156 93-249 45-233 (447)
91 TIGR03539 DapC_actino succinyl 99.9 3.2E-21 6.9E-26 174.1 16.5 154 85-249 11-175 (357)
92 PRK08354 putative aminotransfe 99.9 4.6E-21 1E-25 170.1 16.9 142 93-249 6-150 (311)
93 PRK05664 threonine-phosphate d 99.9 5.9E-21 1.3E-25 170.8 16.3 151 80-249 5-157 (330)
94 KOG0633 Histidinol phosphate a 99.9 8.6E-22 1.9E-26 166.0 9.7 171 62-241 11-183 (375)
95 PRK07777 aminotransferase; Val 99.9 3.1E-20 6.8E-25 169.2 20.4 154 95-249 24-192 (387)
96 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.1E-20 2.4E-25 169.0 16.6 156 79-249 1-158 (330)
97 PRK08175 aminotransferase; Val 99.9 3.4E-20 7.5E-25 169.6 20.1 156 93-249 27-197 (395)
98 PRK07865 N-succinyldiaminopime 99.9 1.4E-20 3E-25 170.3 17.3 154 85-249 17-181 (364)
99 PRK13238 tnaA tryptophanase/L- 99.9 2.7E-20 6E-25 173.4 18.6 166 81-249 22-211 (460)
100 TIGR03801 asp_4_decarbox aspar 99.8 2.7E-20 5.8E-25 174.9 16.8 151 96-248 95-272 (521)
101 PF00155 Aminotran_1_2: Aminot 99.8 3.1E-20 6.6E-25 167.2 13.4 154 96-249 2-181 (363)
102 PRK09440 avtA valine--pyruvate 99.8 2E-19 4.2E-24 165.5 14.8 152 95-249 30-212 (416)
103 COG1167 ARO8 Transcriptional r 99.8 1.3E-18 2.7E-23 162.3 17.4 154 95-249 89-260 (459)
104 PLN02397 aspartate transaminas 99.8 1.7E-18 3.6E-23 160.0 17.5 155 94-249 47-227 (423)
105 PRK08637 hypothetical protein; 99.8 1.7E-18 3.6E-23 158.1 16.9 136 111-246 23-176 (388)
106 PRK10874 cysteine sulfinate de 99.8 3.2E-17 7E-22 150.0 19.4 152 95-249 18-190 (401)
107 TIGR03392 FeS_syn_CsdA cystein 99.8 3.9E-17 8.4E-22 149.4 19.2 151 96-249 16-187 (398)
108 cd00617 Tnase_like Tryptophana 99.7 5.8E-17 1.3E-21 149.7 17.5 154 93-249 9-186 (431)
109 TIGR01977 am_tr_V_EF2568 cyste 99.7 4.5E-17 9.7E-22 147.4 15.9 150 98-249 1-167 (376)
110 PRK10534 L-threonine aldolase; 99.7 5.1E-17 1.1E-21 145.0 14.5 148 97-249 1-160 (333)
111 PLN02721 threonine aldolase 99.7 7.5E-17 1.6E-21 144.5 14.3 151 96-249 6-171 (353)
112 PRK09295 bifunctional cysteine 99.7 4.4E-16 9.5E-21 142.9 17.1 151 96-249 23-194 (406)
113 cd00609 AAT_like Aspartate ami 99.7 4.6E-16 9.9E-21 138.2 16.3 151 98-249 1-165 (350)
114 cd06502 TA_like Low-specificit 99.7 2.8E-16 6E-21 140.0 14.9 143 103-249 4-159 (338)
115 cd06451 AGAT_like Alanine-glyo 99.7 4.1E-16 8.8E-21 140.3 15.4 144 105-249 6-154 (356)
116 PLN02855 Bifunctional selenocy 99.7 8E-16 1.7E-20 142.0 17.2 152 95-249 31-203 (424)
117 KOG0256 1-aminocyclopropane-1- 99.7 1.4E-16 3E-21 141.7 11.3 125 124-248 115-258 (471)
118 TIGR01979 sufS cysteine desulf 99.7 1.2E-15 2.5E-20 139.7 17.1 152 95-249 17-189 (403)
119 cd06453 SufS_like Cysteine des 99.7 1.3E-15 2.8E-20 137.8 16.8 117 131-249 45-169 (373)
120 PRK02948 cysteine desulfurase; 99.7 1E-15 2.2E-20 139.1 16.2 149 98-249 2-168 (381)
121 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 1.5E-15 3.2E-20 137.3 16.5 143 104-249 8-169 (361)
122 TIGR01976 am_tr_V_VC1184 cyste 99.7 5.6E-15 1.2E-19 134.8 18.2 150 97-249 18-186 (397)
123 PRK14012 cysteine desulfurase; 99.6 7.7E-15 1.7E-19 134.7 17.5 149 98-249 5-174 (404)
124 PRK09331 Sep-tRNA:Cys-tRNA syn 99.6 1E-14 2.3E-19 133.2 17.2 153 94-249 17-188 (387)
125 TIGR02006 IscS cysteine desulf 99.6 1.3E-14 2.8E-19 133.1 16.8 149 98-249 5-172 (402)
126 PRK00451 glycine dehydrogenase 99.6 1.1E-14 2.5E-19 135.2 16.6 150 96-249 69-233 (447)
127 TIGR02080 O_succ_thio_ly O-suc 99.6 4.3E-15 9.3E-20 135.7 13.3 137 98-249 26-166 (382)
128 PRK08861 cystathionine gamma-s 99.6 7.2E-15 1.6E-19 134.3 14.5 117 124-249 48-168 (388)
129 COG0520 csdA Selenocysteine ly 99.6 3E-14 6.4E-19 130.8 17.5 153 94-249 20-192 (405)
130 PRK06234 methionine gamma-lyas 99.6 1.3E-14 2.8E-19 133.3 14.7 116 124-248 59-178 (400)
131 TIGR03402 FeS_nifS cysteine de 99.6 3E-14 6.4E-19 129.5 16.7 147 100-249 3-166 (379)
132 PRK08045 cystathionine gamma-s 99.6 1.5E-14 3.3E-19 132.2 14.6 117 124-249 47-167 (386)
133 PLN02651 cysteine desulfurase 99.6 3E-14 6.4E-19 129.0 16.2 148 99-249 2-168 (364)
134 TIGR03403 nifS_epsilon cystein 99.6 1.4E-14 3.1E-19 131.8 13.7 148 99-249 2-170 (382)
135 PRK07050 cystathionine beta-ly 99.6 1.6E-14 3.4E-19 132.4 14.1 117 124-249 60-180 (394)
136 PRK07049 methionine gamma-lyas 99.6 2.4E-14 5.2E-19 132.5 15.2 117 124-247 78-202 (427)
137 PRK08776 cystathionine gamma-s 99.6 3E-14 6.5E-19 131.1 14.8 117 124-249 55-175 (405)
138 TIGR01822 2am3keto_CoA 2-amino 99.6 7.2E-14 1.6E-18 127.4 17.1 148 94-249 37-200 (393)
139 cd00613 GDC-P Glycine cleavage 99.6 9.4E-14 2E-18 126.7 17.2 153 95-249 20-189 (398)
140 TIGR03235 DNA_S_dndA cysteine 99.6 1E-13 2.2E-18 124.8 17.2 140 108-249 9-168 (353)
141 PRK11658 UDP-4-amino-4-deoxy-L 99.6 5.2E-14 1.1E-18 128.3 15.4 130 113-249 16-148 (379)
142 PLN02242 methionine gamma-lyas 99.6 4.8E-14 1E-18 130.2 14.1 117 125-249 72-193 (418)
143 PRK08133 O-succinylhomoserine 99.6 7.6E-14 1.6E-18 127.8 14.7 116 125-249 57-176 (390)
144 PRK13479 2-aminoethylphosphona 99.6 6.4E-14 1.4E-18 126.7 14.1 143 105-249 12-161 (368)
145 TIGR03812 tyr_de_CO2_Arch tyro 99.6 8.8E-14 1.9E-18 125.8 14.5 117 131-249 61-183 (373)
146 PRK08249 cystathionine gamma-s 99.6 6.7E-14 1.4E-18 128.5 13.8 117 124-249 59-179 (398)
147 TIGR01437 selA_rel uncharacter 99.5 7.7E-14 1.7E-18 126.6 13.8 134 109-249 25-179 (363)
148 PRK08247 cystathionine gamma-s 99.5 6.8E-14 1.5E-18 127.0 13.4 116 124-249 47-166 (366)
149 PRK07503 methionine gamma-lyas 99.5 8E-14 1.7E-18 128.2 14.0 117 124-249 60-180 (403)
150 TIGR01328 met_gam_lyase methio 99.5 7.9E-14 1.7E-18 127.7 13.6 117 124-249 54-174 (391)
151 TIGR02379 ECA_wecE TDP-4-keto- 99.5 1.6E-13 3.4E-18 125.2 15.4 132 111-249 11-146 (376)
152 TIGR02539 SepCysS Sep-tRNA:Cys 99.5 1E-13 2.3E-18 125.8 14.1 115 131-249 53-176 (370)
153 PLN02409 serine--glyoxylate am 99.5 1.2E-13 2.6E-18 126.8 14.5 145 104-249 15-169 (401)
154 PRK07811 cystathionine gamma-s 99.5 1.3E-13 2.9E-18 126.1 14.7 117 124-249 56-176 (388)
155 PRK07504 O-succinylhomoserine 99.5 1.1E-13 2.4E-18 127.0 14.1 143 97-249 31-180 (398)
156 cd00615 Orn_deC_like Ornithine 99.5 1.7E-13 3.6E-18 120.8 14.1 123 124-249 54-183 (294)
157 PRK07810 O-succinylhomoserine 99.5 2E-13 4.3E-18 125.6 15.0 117 124-249 65-185 (403)
158 TIGR00858 bioF 8-amino-7-oxono 99.5 3.3E-13 7.2E-18 120.9 16.0 148 93-249 14-176 (360)
159 TIGR03301 PhnW-AepZ 2-aminoeth 99.5 3E-13 6.5E-18 121.1 14.7 142 106-249 7-155 (355)
160 PRK09028 cystathionine beta-ly 99.5 4.7E-13 1E-17 122.6 16.2 136 105-249 33-176 (394)
161 TIGR01325 O_suc_HS_sulf O-succ 99.5 2.8E-13 6.2E-18 123.6 14.6 117 124-249 49-169 (380)
162 PRK06702 O-acetylhomoserine am 99.5 4.4E-13 9.6E-18 123.9 15.8 114 128-249 60-177 (432)
163 PRK13520 L-tyrosine decarboxyl 99.5 5.7E-13 1.2E-17 120.3 15.6 139 109-249 32-181 (371)
164 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 3.4E-13 7.4E-18 124.6 14.2 117 124-249 52-172 (418)
165 PRK08574 cystathionine gamma-s 99.5 4.5E-13 9.7E-18 122.5 14.5 117 124-249 48-167 (385)
166 PRK08248 O-acetylhomoserine am 99.5 7.5E-13 1.6E-17 122.7 15.9 116 125-249 60-179 (431)
167 PRK06460 hypothetical protein; 99.5 4.4E-13 9.5E-18 122.2 14.0 116 125-249 41-160 (376)
168 PRK06767 methionine gamma-lyas 99.5 4.4E-13 9.6E-18 122.6 13.9 117 124-249 56-176 (386)
169 PRK08064 cystathionine beta-ly 99.5 5.4E-13 1.2E-17 122.2 14.0 113 127-249 52-168 (390)
170 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.5 1.3E-12 2.9E-17 118.9 16.4 129 114-249 14-146 (375)
171 PRK06939 2-amino-3-ketobutyrat 99.5 1.4E-12 3.1E-17 118.6 16.4 149 93-249 40-204 (397)
172 PRK07671 cystathionine beta-ly 99.5 7.3E-13 1.6E-17 120.8 14.4 116 124-249 45-164 (377)
173 TIGR01329 cysta_beta_ly_E cyst 99.5 7.7E-13 1.7E-17 120.7 14.4 113 127-249 45-161 (378)
174 cd01494 AAT_I Aspartate aminot 99.5 1E-12 2.3E-17 104.6 13.1 118 131-249 2-122 (170)
175 TIGR02326 transamin_PhnW 2-ami 99.5 8.1E-13 1.8E-17 119.4 13.6 142 106-249 11-159 (363)
176 PRK05939 hypothetical protein; 99.5 1.8E-12 4E-17 118.9 16.0 113 128-249 46-161 (397)
177 PRK07269 cystathionine gamma-s 99.5 3.5E-13 7.5E-18 122.4 11.0 117 124-249 49-166 (364)
178 PRK07582 cystathionine gamma-l 99.5 7.8E-13 1.7E-17 120.2 12.9 113 124-249 46-162 (366)
179 PRK05958 8-amino-7-oxononanoat 99.5 2.7E-12 5.9E-17 116.2 16.3 149 93-249 37-198 (385)
180 TIGR03588 PseC UDP-4-keto-6-de 99.5 2.2E-12 4.8E-17 117.5 15.6 117 127-249 27-148 (380)
181 cd06450 DOPA_deC_like DOPA dec 99.4 1.7E-12 3.6E-17 116.1 14.3 137 112-249 14-178 (345)
182 TIGR01324 cysta_beta_ly_B cyst 99.4 1.7E-12 3.7E-17 118.4 14.5 115 126-249 47-165 (377)
183 cd06454 KBL_like KBL_like; thi 99.4 2.3E-12 5E-17 115.2 15.0 145 97-249 3-162 (349)
184 PRK15407 lipopolysaccharide bi 99.4 5.4E-12 1.2E-16 117.2 17.4 113 130-249 64-186 (438)
185 PRK04366 glycine dehydrogenase 99.4 3.4E-12 7.4E-17 119.9 16.2 148 100-249 73-238 (481)
186 KOG0258 Alanine aminotransfera 99.4 1.4E-12 3.1E-17 115.7 12.6 125 124-248 107-247 (475)
187 KOG1549 Cysteine desulfurase N 99.4 3E-12 6.5E-17 115.8 14.9 153 94-249 41-211 (428)
188 COG1448 TyrB Aspartate/tyrosin 99.4 2.8E-12 6.2E-17 113.9 14.2 170 79-248 9-204 (396)
189 PRK08134 O-acetylhomoserine am 99.4 2.5E-12 5.5E-17 119.2 14.3 115 126-249 61-179 (433)
190 cd00616 AHBA_syn 3-amino-5-hyd 99.4 3.9E-12 8.5E-17 113.9 15.1 116 127-249 16-133 (352)
191 PRK05994 O-acetylhomoserine am 99.4 3E-12 6.6E-17 118.6 14.7 115 126-249 60-178 (427)
192 PRK06084 O-acetylhomoserine am 99.4 2.3E-12 5E-17 119.2 13.8 116 125-249 54-173 (425)
193 PRK06176 cystathionine gamma-s 99.4 3E-12 6.5E-17 116.9 14.2 116 124-249 45-164 (380)
194 cd00614 CGS_like CGS_like: Cys 99.4 4.2E-12 9E-17 115.4 14.6 117 124-249 35-155 (369)
195 COG1104 NifS Cysteine sulfinat 99.4 5.5E-12 1.2E-16 113.5 14.8 150 97-249 2-171 (386)
196 PRK00011 glyA serine hydroxyme 99.4 2.1E-12 4.5E-17 118.9 12.4 151 93-249 23-193 (416)
197 TIGR01825 gly_Cac_T_rel pyrido 99.4 1.2E-11 2.6E-16 112.4 16.0 149 93-249 31-193 (385)
198 KOG0634 Aromatic amino acid am 99.4 4.7E-12 1E-16 113.8 12.8 124 124-249 94-237 (472)
199 cd00378 SHMT Serine-glycine hy 99.4 5.7E-12 1.2E-16 115.3 13.1 148 96-249 20-189 (402)
200 PLN02509 cystathionine beta-ly 99.4 7E-12 1.5E-16 117.0 13.5 116 124-249 125-247 (464)
201 PRK05967 cystathionine beta-ly 99.4 1.2E-11 2.6E-16 113.3 14.2 112 129-249 64-179 (395)
202 COG0399 WecE Predicted pyridox 99.4 1.5E-11 3.3E-16 111.1 14.5 114 129-249 34-149 (374)
203 PRK07179 hypothetical protein; 99.4 5.1E-11 1.1E-15 109.5 17.8 149 93-249 52-211 (407)
204 PRK13392 5-aminolevulinate syn 99.3 2.6E-11 5.7E-16 111.5 15.3 146 96-249 47-208 (410)
205 PF00266 Aminotran_5: Aminotra 99.3 9.5E-12 2E-16 112.8 11.8 148 99-249 2-169 (371)
206 PRK05968 hypothetical protein; 99.3 3.3E-11 7.2E-16 110.4 14.4 116 124-249 58-177 (389)
207 TIGR00707 argD acetylornithine 99.3 2.7E-11 5.9E-16 109.8 13.5 153 94-249 26-204 (379)
208 PRK07812 O-acetylhomoserine am 99.3 6.3E-11 1.4E-15 110.0 15.5 114 128-249 68-185 (436)
209 PF01041 DegT_DnrJ_EryC1: DegT 99.3 3.2E-11 7E-16 109.4 12.4 114 129-249 25-140 (363)
210 COG0075 Serine-pyruvate aminot 99.2 2.5E-10 5.5E-15 103.3 14.6 143 106-249 13-161 (383)
211 TIGR01814 kynureninase kynuren 99.2 1.2E-10 2.7E-15 107.0 12.9 152 95-249 26-201 (406)
212 PRK08114 cystathionine beta-ly 99.2 2E-10 4.4E-15 105.2 14.2 113 127-248 60-176 (395)
213 cd00610 OAT_like Acetyl ornith 99.2 1.7E-10 3.6E-15 105.7 13.0 157 93-249 34-225 (413)
214 PRK03244 argD acetylornithine 99.2 3.3E-10 7.2E-15 103.7 14.0 151 93-249 41-217 (398)
215 PRK05613 O-acetylhomoserine am 99.2 4.6E-10 1E-14 104.2 14.4 114 128-249 68-185 (437)
216 TIGR03576 pyridox_MJ0158 pyrid 99.2 5.1E-10 1.1E-14 101.0 14.0 108 131-249 56-168 (346)
217 PLN02822 serine palmitoyltrans 99.2 8.2E-10 1.8E-14 103.9 15.8 154 93-249 107-275 (481)
218 PF01212 Beta_elim_lyase: Beta 99.2 1.3E-10 2.8E-15 102.3 9.6 139 109-249 7-158 (290)
219 PLN02483 serine palmitoyltrans 99.2 4.5E-10 9.8E-15 105.8 13.7 147 95-249 100-270 (489)
220 PLN02994 1-aminocyclopropane-1 99.2 1.3E-10 2.8E-15 92.9 8.6 86 93-181 41-152 (153)
221 PRK02769 histidine decarboxyla 99.2 4.4E-10 9.5E-15 102.7 12.7 117 132-249 68-190 (380)
222 PRK02627 acetylornithine amino 99.2 5.6E-10 1.2E-14 101.9 13.2 154 93-249 37-216 (396)
223 PF12897 Aminotran_MocR: Alani 99.1 3.3E-10 7E-15 101.3 11.2 115 124-240 62-195 (425)
224 PF01053 Cys_Met_Meta_PP: Cys/ 99.1 7.2E-10 1.6E-14 101.3 13.7 116 125-249 51-170 (386)
225 PLN03032 serine decarboxylase; 99.1 6.2E-10 1.3E-14 101.3 12.5 118 131-249 68-191 (374)
226 PLN02414 glycine dehydrogenase 99.1 5.5E-10 1.2E-14 111.9 13.2 150 95-249 525-696 (993)
227 PRK06434 cystathionine gamma-l 99.1 1E-09 2.2E-14 100.4 12.5 113 127-249 62-178 (384)
228 TIGR02618 tyr_phenol_ly tyrosi 99.1 3.8E-09 8.3E-14 97.4 14.3 135 111-249 50-204 (450)
229 PLN03227 serine palmitoyltrans 99.0 4E-09 8.7E-14 96.7 14.2 119 126-249 39-168 (392)
230 TIGR01821 5aminolev_synth 5-am 99.0 1E-08 2.3E-13 94.0 16.1 147 95-249 45-207 (402)
231 COG0626 MetC Cystathionine bet 99.0 6.4E-09 1.4E-13 94.8 14.4 117 125-249 59-179 (396)
232 PRK01278 argD acetylornithine 99.0 8.1E-09 1.8E-13 94.3 14.0 154 93-249 29-209 (389)
233 COG3977 Alanine-alpha-ketoisov 99.0 4E-09 8.7E-14 91.4 10.8 151 93-249 28-212 (417)
234 PRK09064 5-aminolevulinate syn 99.0 2.7E-08 5.9E-13 91.3 15.8 147 95-249 46-208 (407)
235 KOG2862 Alanine-glyoxylate ami 98.9 1.8E-08 3.9E-13 87.7 12.8 144 106-249 25-173 (385)
236 PLN02724 Molybdenum cofactor s 98.9 2.2E-08 4.8E-13 99.6 15.3 150 96-246 34-219 (805)
237 KOG0053 Cystathionine beta-lya 98.9 2.5E-08 5.4E-13 90.4 13.1 117 124-249 72-192 (409)
238 TIGR01788 Glu-decarb-GAD gluta 98.9 1.8E-08 3.8E-13 93.5 12.2 116 131-248 82-215 (431)
239 COG2008 GLY1 Threonine aldolas 98.8 8.3E-08 1.8E-12 85.2 14.0 145 103-249 6-163 (342)
240 PRK13393 5-aminolevulinate syn 98.8 1.2E-07 2.7E-12 87.1 15.8 147 95-249 45-207 (406)
241 TIGR00474 selA seryl-tRNA(sec) 98.8 1.1E-07 2.5E-12 88.6 15.7 135 109-249 93-245 (454)
242 PRK04311 selenocysteine syntha 98.8 1.5E-07 3.3E-12 88.0 16.5 135 109-249 98-250 (464)
243 COG1103 Archaea-specific pyrid 98.8 6.8E-08 1.5E-12 82.8 12.5 138 109-249 29-186 (382)
244 TIGR03531 selenium_SpcS O-phos 98.8 8.8E-08 1.9E-12 89.0 14.4 117 132-249 108-235 (444)
245 PRK00854 rocD ornithine--oxo-a 98.8 6.9E-08 1.5E-12 88.5 13.1 149 93-249 39-221 (401)
246 KOG1368 Threonine aldolase [Am 98.8 7E-08 1.5E-12 83.6 11.4 150 97-249 23-188 (384)
247 TIGR00713 hemL glutamate-1-sem 98.8 1.7E-07 3.7E-12 86.6 14.1 155 93-249 46-229 (423)
248 PTZ00094 serine hydroxymethylt 98.8 1.2E-07 2.7E-12 88.5 13.2 150 95-249 34-210 (452)
249 cd00611 PSAT_like Phosphoserin 98.7 8E-08 1.7E-12 86.9 11.1 130 105-236 6-156 (355)
250 PRK13237 tyrosine phenol-lyase 98.7 3.4E-07 7.4E-12 84.9 15.0 122 124-249 72-211 (460)
251 COG2873 MET17 O-acetylhomoseri 98.7 2E-07 4.3E-12 83.1 12.8 118 123-249 53-177 (426)
252 PRK07505 hypothetical protein; 98.7 5E-07 1.1E-11 83.0 15.0 147 93-249 44-209 (402)
253 PRK05937 8-amino-7-oxononanoat 98.7 1E-06 2.2E-11 80.1 16.6 111 131-249 58-173 (370)
254 PF01276 OKR_DC_1: Orn/Lys/Arg 98.7 4.5E-08 9.7E-13 89.9 7.1 120 127-249 64-197 (417)
255 PLN02263 serine decarboxylase 98.7 6.4E-07 1.4E-11 83.6 14.3 116 133-249 137-258 (470)
256 PRK13034 serine hydroxymethylt 98.6 4.6E-07 1E-11 83.8 12.5 148 95-249 28-196 (416)
257 PRK15029 arginine decarboxylas 98.6 8E-07 1.7E-11 87.2 13.1 120 127-249 203-341 (755)
258 TIGR00461 gcvP glycine dehydro 98.6 9.6E-07 2.1E-11 88.2 13.7 117 131-249 532-658 (939)
259 PRK03080 phosphoserine aminotr 98.5 7.7E-07 1.7E-11 81.2 11.5 130 106-242 20-160 (378)
260 PTZ00125 ornithine aminotransf 98.5 1.9E-06 4.2E-11 78.8 13.7 155 93-249 29-212 (400)
261 PRK04073 rocD ornithine--oxo-a 98.5 3E-06 6.5E-11 77.7 14.7 149 93-249 38-220 (396)
262 PRK13578 ornithine decarboxyla 98.5 1.7E-06 3.7E-11 84.3 12.6 121 127-249 172-312 (720)
263 KOG1411 Aspartate aminotransfe 98.4 4E-06 8.7E-11 74.2 12.7 162 86-247 42-229 (427)
264 PRK04260 acetylornithine amino 98.4 1E-05 2.2E-10 73.6 14.5 156 93-249 27-199 (375)
265 PRK02936 argD acetylornithine 98.4 1.2E-05 2.6E-10 73.1 14.5 156 93-249 27-201 (377)
266 PRK05367 glycine dehydrogenase 98.3 3.2E-05 6.9E-10 78.2 18.2 150 95-249 499-670 (954)
267 PRK15400 lysine decarboxylase 98.3 7.1E-06 1.5E-10 80.0 13.0 119 127-248 193-325 (714)
268 COG1982 LdcC Arginine/lysine/o 98.3 8.5E-06 1.8E-10 76.9 12.8 117 127-245 68-192 (557)
269 PRK15399 lysine decarboxylase 98.3 1.1E-05 2.4E-10 78.7 13.2 114 127-242 193-320 (713)
270 KOG1412 Aspartate aminotransfe 98.2 3E-05 6.5E-10 67.9 13.2 163 85-247 19-209 (410)
271 COG1003 GcvP Glycine cleavage 98.2 1E-05 2.2E-10 73.6 10.8 153 95-249 66-234 (496)
272 TIGR01364 serC_1 phosphoserine 98.2 5.9E-06 1.3E-10 74.7 9.4 102 131-236 39-148 (349)
273 PF06838 Met_gamma_lyase: Meth 98.2 3.8E-05 8.2E-10 68.8 12.5 111 112-225 28-161 (403)
274 PRK12381 bifunctional succinyl 98.2 6.3E-05 1.4E-09 69.3 14.4 153 93-249 37-217 (406)
275 COG0076 GadB Glutamate decarbo 98.1 3E-05 6.4E-10 72.6 11.5 139 109-249 74-237 (460)
276 TIGR03799 NOD_PanD_pyr putativ 98.1 4.8E-05 1E-09 72.3 12.6 100 149-249 162-295 (522)
277 TIGR03246 arg_catab_astC succi 98.1 0.00016 3.5E-09 66.4 15.5 149 93-249 33-213 (397)
278 PRK05355 3-phosphoserine/phosp 98.1 3E-05 6.5E-10 70.5 10.6 130 105-236 10-159 (360)
279 PRK05093 argD bifunctional N-s 98.0 0.00026 5.6E-09 65.1 15.5 148 93-249 38-218 (403)
280 PF00282 Pyridoxal_deC: Pyrido 98.0 6.1E-05 1.3E-09 68.8 10.9 116 133-249 83-224 (373)
281 TIGR01366 serC_3 phosphoserine 98.0 6E-05 1.3E-09 68.5 10.5 128 106-240 11-150 (361)
282 PLN02624 ornithine-delta-amino 98.0 0.00015 3.2E-09 68.4 13.3 150 93-249 73-258 (474)
283 TIGR02617 tnaA_trp_ase tryptop 98.0 0.00015 3.2E-09 67.2 12.8 149 97-249 43-217 (467)
284 PLN02271 serine hydroxymethylt 98.0 0.00022 4.9E-09 67.7 14.3 149 95-249 148-326 (586)
285 PRK12566 glycine dehydrogenase 98.0 0.00019 4.1E-09 71.9 14.4 117 131-249 545-671 (954)
286 PLN02590 probable tyrosine dec 97.9 0.00016 3.6E-09 68.9 12.6 115 134-249 175-317 (539)
287 PRK00062 glutamate-1-semialdeh 97.9 0.00034 7.4E-09 64.9 14.2 155 93-249 48-231 (426)
288 PLN03226 serine hydroxymethylt 97.9 0.00031 6.7E-09 66.2 13.8 150 95-249 34-211 (475)
289 TIGR01885 Orn_aminotrans ornit 97.9 0.0004 8.6E-09 63.8 14.2 150 93-249 35-220 (401)
290 PLN02414 glycine dehydrogenase 97.9 0.0004 8.7E-09 70.4 15.2 138 100-249 108-263 (993)
291 PLN02880 tyrosine decarboxylas 97.8 0.00022 4.7E-09 67.5 12.0 116 133-249 126-269 (490)
292 PRK04013 argD acetylornithine/ 97.8 0.00039 8.4E-09 63.3 12.1 149 93-249 22-196 (364)
293 TIGR01365 serC_2 phosphoserine 97.8 0.00024 5.1E-09 64.9 10.7 119 113-238 19-147 (374)
294 PRK05367 glycine dehydrogenase 97.7 0.00092 2E-08 67.8 15.4 137 100-249 81-235 (954)
295 COG4992 ArgD Ornithine/acetylo 97.7 0.00046 1E-08 62.8 11.1 156 92-249 39-218 (404)
296 PLN02955 8-amino-7-oxononanoat 97.7 0.004 8.6E-08 58.5 17.6 147 95-249 102-279 (476)
297 COG0156 BioF 7-keto-8-aminopel 97.7 0.0014 3E-08 60.1 14.2 148 94-249 38-201 (388)
298 TIGR03811 tyr_de_CO2_Ent tyros 97.6 0.001 2.2E-08 64.4 13.0 114 132-246 126-305 (608)
299 PF04864 Alliinase_C: Allinase 97.5 2.7E-05 5.9E-10 69.2 1.0 96 131-234 45-153 (363)
300 COG3844 Kynureninase [Amino ac 97.5 0.00051 1.1E-08 60.7 8.5 150 93-249 28-196 (407)
301 PF00464 SHMT: Serine hydroxym 97.5 0.00051 1.1E-08 63.1 8.4 149 96-249 21-197 (399)
302 PRK03715 argD acetylornithine 97.5 0.0036 7.7E-08 57.6 14.0 155 93-249 34-213 (395)
303 COG4100 Cystathionine beta-lya 97.4 0.0044 9.5E-08 54.5 13.0 113 112-226 39-173 (416)
304 PLN02452 phosphoserine transam 97.4 0.0017 3.7E-08 59.2 10.8 138 96-238 7-165 (365)
305 PRK13580 serine hydroxymethylt 97.4 0.0037 8E-08 58.9 13.0 149 95-249 49-248 (493)
306 COG0112 GlyA Glycine/serine hy 97.3 0.0033 7.2E-08 56.9 11.3 147 96-248 27-193 (413)
307 PRK05964 adenosylmethionine--8 97.2 0.0063 1.4E-07 56.4 12.6 157 93-249 40-234 (423)
308 PRK04612 argD acetylornithine 97.2 0.012 2.6E-07 54.4 14.4 155 93-249 38-221 (408)
309 PRK08360 4-aminobutyrate amino 97.2 0.01 2.2E-07 55.5 13.7 157 93-249 39-238 (443)
310 PF02347 GDC-P: Glycine cleava 97.2 0.0022 4.8E-08 59.3 9.1 137 102-249 72-226 (429)
311 PRK12462 phosphoserine aminotr 97.1 0.0092 2E-07 54.4 12.0 133 98-236 6-161 (364)
312 PLN00144 acetylornithine trans 97.1 0.019 4.1E-07 52.5 14.2 150 93-249 13-201 (382)
313 KOG1383 Glutamate decarboxylas 97.0 0.0035 7.6E-08 57.8 8.5 114 132-247 123-246 (491)
314 PRK08088 4-aminobutyrate amino 96.9 0.026 5.6E-07 52.4 14.0 155 93-249 39-233 (425)
315 COG0001 HemL Glutamate-1-semia 96.9 0.036 7.7E-07 51.2 14.3 155 93-249 51-234 (432)
316 TIGR00461 gcvP glycine dehydro 96.9 0.018 3.8E-07 58.3 13.4 137 100-249 69-223 (939)
317 PRK09792 4-aminobutyrate trans 96.9 0.04 8.7E-07 51.1 14.8 157 93-249 38-232 (421)
318 PRK06541 hypothetical protein; 96.8 0.035 7.5E-07 52.2 13.8 157 93-249 50-255 (460)
319 COG0403 GcvP Glycine cleavage 96.7 0.094 2E-06 48.2 15.0 144 99-249 79-240 (450)
320 PRK06058 4-aminobutyrate amino 96.6 0.072 1.6E-06 49.8 14.6 156 93-249 54-253 (443)
321 PRK08117 4-aminobutyrate amino 96.6 0.066 1.4E-06 49.8 14.4 157 93-249 41-241 (433)
322 TIGR03372 putres_am_tran putre 96.6 0.059 1.3E-06 50.4 13.7 152 93-249 73-258 (442)
323 PRK07495 4-aminobutyrate amino 96.4 0.1 2.3E-06 48.5 14.0 156 93-249 38-232 (425)
324 PRK12389 glutamate-1-semialdeh 96.4 0.15 3.2E-06 47.5 15.1 156 93-249 51-234 (428)
325 PRK07046 aminotransferase; Val 96.3 0.16 3.5E-06 47.7 14.9 154 93-249 73-252 (453)
326 PRK07482 hypothetical protein; 96.3 0.11 2.3E-06 48.9 13.8 157 93-249 48-254 (461)
327 PRK11522 putrescine--2-oxoglut 96.3 0.079 1.7E-06 49.8 12.9 157 93-249 80-265 (459)
328 PRK06943 adenosylmethionine--8 96.2 0.12 2.6E-06 48.5 13.5 157 93-249 52-256 (453)
329 PRK05965 hypothetical protein; 96.2 0.11 2.5E-06 48.7 13.3 157 93-249 44-249 (459)
330 COG3033 TnaA Tryptophanase [Am 96.2 0.044 9.5E-07 49.4 9.5 124 124-249 73-219 (471)
331 PRK12403 putative aminotransfe 96.0 0.24 5.2E-06 46.6 14.3 157 93-249 52-256 (460)
332 PLN02482 glutamate-1-semialdeh 96.0 0.25 5.4E-06 46.7 14.3 150 94-249 98-280 (474)
333 PRK06062 hypothetical protein; 96.0 0.28 6E-06 46.0 14.5 157 93-249 51-248 (451)
334 TIGR00709 dat 2,4-diaminobutyr 95.9 0.26 5.6E-06 46.1 13.8 157 93-249 37-240 (442)
335 PRK06916 adenosylmethionine--8 95.8 0.22 4.8E-06 46.8 13.1 157 93-249 54-258 (460)
336 PRK06082 4-aminobutyrate amino 95.8 0.34 7.4E-06 45.5 14.2 156 93-249 70-262 (459)
337 PRK06105 aminotransferase; Pro 95.6 0.34 7.3E-06 45.6 13.5 157 93-249 46-252 (460)
338 PRK07030 adenosylmethionine--8 95.6 0.27 5.9E-06 46.3 12.9 157 93-249 45-249 (466)
339 PRK13360 omega amino acid--pyr 95.6 0.45 9.8E-06 44.5 14.3 157 93-249 44-249 (442)
340 TIGR02407 ectoine_ectB diamino 95.5 0.51 1.1E-05 43.6 14.4 157 93-249 33-228 (412)
341 PRK06777 4-aminobutyrate amino 95.5 0.57 1.2E-05 43.5 14.5 157 93-249 38-232 (421)
342 PRK09221 beta alanine--pyruvat 95.4 0.36 7.9E-06 45.2 13.1 157 93-249 47-252 (445)
343 PRK08742 adenosylmethionine--8 95.4 0.29 6.4E-06 46.2 12.6 157 93-249 62-271 (472)
344 PRK07480 putative aminotransfe 95.4 0.29 6.3E-06 46.0 12.5 157 93-249 48-253 (456)
345 PRK07678 aminotransferase; Val 95.4 0.54 1.2E-05 44.1 14.1 156 93-249 45-247 (451)
346 PRK00615 glutamate-1-semialdeh 95.3 0.35 7.5E-06 45.2 12.5 157 93-249 51-235 (433)
347 TIGR00700 GABAtrnsam 4-aminobu 95.3 0.78 1.7E-05 42.5 14.9 157 93-249 31-231 (420)
348 PRK05639 4-aminobutyrate amino 95.2 1 2.2E-05 42.4 15.3 157 93-249 51-256 (457)
349 PLN02760 4-aminobutyrate:pyruv 95.2 0.7 1.5E-05 44.0 14.3 157 93-249 87-294 (504)
350 PRK07036 hypothetical protein; 95.1 0.58 1.3E-05 44.1 13.5 157 93-249 49-254 (466)
351 PRK08593 4-aminobutyrate amino 95.1 0.67 1.4E-05 43.4 13.7 157 93-249 40-241 (445)
352 COG1921 SelA Selenocysteine sy 95.0 0.59 1.3E-05 42.8 12.5 134 110-249 40-187 (395)
353 PRK06149 hypothetical protein; 95.0 0.92 2E-05 46.7 15.4 90 93-182 583-679 (972)
354 PRK05630 adenosylmethionine--8 95.0 0.68 1.5E-05 43.0 13.3 156 93-249 38-235 (422)
355 PRK06917 hypothetical protein; 94.9 1 2.2E-05 42.3 14.4 157 93-249 29-234 (447)
356 PRK09264 diaminobutyrate--2-ox 94.9 1 2.2E-05 41.9 14.2 157 93-249 37-232 (425)
357 PRK06918 4-aminobutyrate amino 94.8 1.1 2.4E-05 41.9 14.3 92 93-184 52-155 (451)
358 PRK05769 4-aminobutyrate amino 94.8 1 2.3E-05 42.0 14.1 157 93-249 52-255 (441)
359 PF05889 SLA_LP_auto_ag: Solub 94.8 0.11 2.4E-06 47.4 7.3 109 141-249 68-185 (389)
360 PRK07986 adenosylmethionine--8 94.7 0.77 1.7E-05 42.8 13.0 157 93-249 41-239 (428)
361 COG0160 GabT 4-aminobutyrate a 94.6 1.7 3.7E-05 40.7 14.8 157 93-249 54-256 (447)
362 TIGR00508 bioA adenosylmethion 94.6 0.6 1.3E-05 43.4 12.0 157 93-249 43-242 (427)
363 PRK06173 adenosylmethionine--8 94.6 0.85 1.8E-05 42.5 12.9 157 93-249 42-241 (429)
364 PRK07483 hypothetical protein; 94.5 1.2 2.6E-05 41.6 13.9 91 93-183 28-135 (443)
365 PRK07481 hypothetical protein; 94.3 1.5 3.2E-05 41.1 14.0 157 93-249 40-247 (449)
366 KOG2040 Glycine dehydrogenase 94.1 0.35 7.5E-06 46.9 9.2 115 134-249 587-710 (1001)
367 PRK06148 hypothetical protein; 94.0 1.2 2.7E-05 46.0 13.7 90 93-182 622-718 (1013)
368 PRK12566 glycine dehydrogenase 93.0 2.8 6E-05 42.9 14.0 138 98-249 82-237 (954)
369 PRK06938 diaminobutyrate--2-ox 92.7 3 6.5E-05 39.3 13.1 157 93-249 61-265 (464)
370 PF03841 SelA: L-seryl-tRNA se 92.3 0.063 1.4E-06 48.7 1.3 112 132-249 50-170 (367)
371 TIGR00699 GABAtrns_euk 4-amino 91.8 4 8.7E-05 38.5 12.8 157 93-249 56-285 (464)
372 KOG0629 Glutamate decarboxylas 91.4 3.5 7.5E-05 38.3 11.3 116 133-249 145-283 (510)
373 COG0161 BioA Adenosylmethionin 91.2 4.7 0.0001 37.8 12.3 139 111-249 63-249 (449)
374 PRK06931 diaminobutyrate--2-ox 91.1 8.4 0.00018 36.2 14.2 93 93-185 56-162 (459)
375 PRK08297 L-lysine aminotransfe 90.5 5.4 0.00012 37.3 12.3 157 93-249 43-259 (443)
376 KOG1360 5-aminolevulinate synt 90.4 1.9 4E-05 39.8 8.6 132 108-249 185-333 (570)
377 PRK06209 glutamate-1-semialdeh 89.2 5.4 0.00012 37.1 11.2 151 93-249 46-217 (431)
378 TIGR03251 LAT_fam L-lysine 6-t 88.6 6.1 0.00013 36.8 11.1 157 93-249 36-252 (431)
379 PF00202 Aminotran_3: Aminotra 88.2 5.1 0.00011 36.0 10.0 156 94-249 15-211 (339)
380 COG2102 Predicted ATPases of P 86.3 8.4 0.00018 32.6 9.4 93 149-249 4-112 (223)
381 KOG1358 Serine palmitoyltransf 85.4 11 0.00023 34.8 10.2 142 94-242 93-257 (467)
382 COG0031 CysK Cysteine synthase 82.7 13 0.00028 33.1 9.5 99 144-243 59-164 (300)
383 KOG1357 Serine palmitoyltransf 81.0 8.6 0.00019 36.0 7.9 103 105-214 152-260 (519)
384 KOG2467 Glycine/serine hydroxy 76.9 18 0.00039 33.2 8.5 142 98-248 43-216 (477)
385 KOG1359 Glycine C-acetyltransf 76.3 11 0.00024 33.5 6.9 85 95-181 67-162 (417)
386 PF05368 NmrA: NmrA-like famil 75.9 27 0.00059 28.9 9.2 63 160-229 12-75 (233)
387 KOG0628 Aromatic-L-amino-acid/ 71.8 16 0.00035 34.3 7.1 77 172-249 184-265 (511)
388 KOG1404 Alanine-glyoxylate ami 70.5 56 0.0012 30.3 10.1 81 109-189 67-155 (442)
389 KOG3846 L-kynurenine hydrolase 69.3 11 0.00023 33.9 5.1 109 130-238 112-234 (465)
390 KOG1402 Ornithine aminotransfe 68.4 28 0.0006 31.6 7.6 137 105-249 72-241 (427)
391 TIGR00290 MJ0570_dom MJ0570-re 68.0 54 0.0012 27.8 9.1 93 149-249 4-111 (223)
392 PRK09189 uroporphyrinogen-III 67.3 53 0.0012 27.6 9.2 85 142-228 92-180 (240)
393 KOG4589 Cell division protein 64.4 81 0.0018 26.4 9.0 39 209-247 127-165 (232)
394 PLN02556 cysteine synthase/L-3 63.6 42 0.0009 30.7 8.2 84 147-232 112-197 (368)
395 COG0505 CarA Carbamoylphosphat 63.3 35 0.00075 31.1 7.3 56 168-231 177-234 (368)
396 PLN02974 adenosylmethionine-8- 63.3 1.2E+02 0.0025 31.0 11.9 71 96-166 366-447 (817)
397 TIGR00289 conserved hypothetic 63.3 70 0.0015 27.1 8.9 93 149-249 4-111 (222)
398 KOG1401 Acetylornithine aminot 62.8 98 0.0021 28.8 10.1 156 94-249 55-240 (433)
399 COG1648 CysG Siroheme synthase 61.7 70 0.0015 26.8 8.6 48 143-191 9-57 (210)
400 PF01902 ATP_bind_4: ATP-bindi 60.9 41 0.0009 28.4 7.1 93 149-249 4-111 (218)
401 COG0373 HemA Glutamyl-tRNA red 58.8 1.1E+02 0.0023 28.6 9.9 94 134-229 165-278 (414)
402 PRK05928 hemD uroporphyrinogen 58.5 63 0.0014 26.8 8.0 92 135-229 92-188 (249)
403 PF02571 CbiJ: Precorrin-6x re 54.9 43 0.00093 28.9 6.3 75 148-231 2-77 (249)
404 cd06578 HemD Uroporphyrinogen- 53.9 84 0.0018 25.7 8.0 86 142-228 95-183 (239)
405 COG1587 HemD Uroporphyrinogen- 53.6 1.4E+02 0.003 25.3 9.7 76 152-227 105-184 (248)
406 PF01282 Ribosomal_S24e: Ribos 52.9 17 0.00037 25.9 3.0 26 127-152 11-36 (84)
407 COG0816 Predicted endonuclease 51.9 25 0.00054 27.7 4.0 42 205-246 40-81 (141)
408 COG1932 SerC Phosphoserine ami 51.0 1.4E+02 0.0031 27.3 9.1 102 131-236 52-162 (365)
409 PF12846 AAA_10: AAA-like doma 51.0 45 0.00098 28.4 6.0 54 152-206 11-64 (304)
410 PRK10892 D-arabinose 5-phospha 49.9 99 0.0022 27.3 8.2 85 149-234 51-138 (326)
411 cd06448 L-Ser-dehyd Serine deh 47.1 2.1E+02 0.0045 25.4 9.9 83 147-232 52-136 (316)
412 cd05013 SIS_RpiR RpiR-like pro 47.0 1.1E+02 0.0024 22.4 7.1 9 217-225 86-94 (139)
413 PF02662 FlpD: Methyl-viologen 46.3 82 0.0018 24.0 6.1 42 191-235 28-74 (124)
414 PRK11337 DNA-binding transcrip 46.3 1.9E+02 0.0041 25.0 9.2 28 149-176 144-172 (292)
415 TIGR01501 MthylAspMutase methy 46.1 94 0.002 24.1 6.4 36 187-226 25-60 (134)
416 PRK07239 bifunctional uroporph 45.7 1.3E+02 0.0029 27.2 8.5 87 142-229 115-212 (381)
417 PF05378 Hydant_A_N: Hydantoin 45.2 1.6E+02 0.0035 23.7 8.0 100 142-249 50-176 (176)
418 cd01018 ZntC Metal binding pro 44.7 1.7E+02 0.0038 25.0 8.7 55 169-228 169-226 (266)
419 PF02571 CbiJ: Precorrin-6x re 44.3 2.1E+02 0.0045 24.6 11.5 109 134-244 118-247 (249)
420 PRK10717 cysteine synthase A; 44.2 1.5E+02 0.0033 26.3 8.4 53 147-199 65-118 (330)
421 PRK06935 2-deoxy-D-gluconate 3 43.6 1E+02 0.0022 25.8 6.9 88 135-225 4-98 (258)
422 PLN03013 cysteine synthase 43.3 1.6E+02 0.0035 27.6 8.6 51 148-199 177-229 (429)
423 TIGR03325 BphB_TodD cis-2,3-di 42.7 1.7E+02 0.0036 24.5 8.2 53 146-198 5-57 (262)
424 TIGR03590 PseG pseudaminic aci 42.7 1.2E+02 0.0025 26.4 7.3 33 190-226 79-111 (279)
425 TIGR01137 cysta_beta cystathio 42.7 1.8E+02 0.004 26.9 9.1 52 147-199 63-116 (454)
426 PLN00011 cysteine synthase 42.6 2E+02 0.0043 25.5 8.9 52 147-199 70-123 (323)
427 TIGR00715 precor6x_red precorr 42.6 2.2E+02 0.0048 24.5 10.0 74 171-245 175-252 (256)
428 TIGR01138 cysM cysteine syntha 42.4 1.3E+02 0.0027 26.4 7.5 52 147-199 60-113 (290)
429 PRK07097 gluconate 5-dehydroge 42.0 1.5E+02 0.0033 24.8 7.9 80 144-226 8-95 (265)
430 COG1087 GalE UDP-glucose 4-epi 41.7 1E+02 0.0023 27.6 6.7 71 148-223 2-72 (329)
431 CHL00200 trpA tryptophan synth 40.7 2.3E+02 0.0051 24.5 8.8 73 158-234 107-183 (263)
432 KOG4132 Uroporphyrinogen III s 40.2 45 0.00097 28.5 4.0 48 180-227 16-64 (260)
433 cd05014 SIS_Kpsf KpsF-like pro 39.9 1.3E+02 0.0029 22.1 6.5 14 185-198 68-81 (128)
434 PRK08057 cobalt-precorrin-6x r 39.4 98 0.0021 26.6 6.2 72 147-231 3-76 (248)
435 COG2004 RPS24A Ribosomal prote 38.9 41 0.0009 25.1 3.2 25 127-151 30-54 (107)
436 PLN02565 cysteine synthase 38.7 1.9E+02 0.0041 25.8 8.1 50 149-199 70-121 (322)
437 TIGR01139 cysK cysteine syntha 38.4 2E+02 0.0044 25.0 8.2 52 147-199 58-111 (298)
438 PRK06500 short chain dehydroge 38.1 1.5E+02 0.0033 24.3 7.1 53 147-199 7-59 (249)
439 PRK11543 gutQ D-arabinose 5-ph 38.1 1.4E+02 0.003 26.2 7.2 15 217-231 115-130 (321)
440 PRK11557 putative DNA-binding 38.1 2.6E+02 0.0056 23.9 9.8 83 149-233 132-218 (278)
441 PRK11524 putative methyltransf 38.0 61 0.0013 28.2 4.8 46 156-201 195-240 (284)
442 cd01994 Alpha_ANH_like_IV This 37.9 2.3E+02 0.0049 23.3 8.2 93 149-249 3-114 (194)
443 cd01017 AdcA Metal binding pro 37.7 2.7E+02 0.0058 24.1 9.0 54 169-225 170-227 (282)
444 TIGR03089 conserved hypothetic 37.7 1.5E+02 0.0032 24.8 7.0 65 148-218 154-225 (227)
445 cd06409 PB1_MUG70 The MUG70 pr 37.5 68 0.0015 23.0 4.1 62 127-197 19-81 (86)
446 cd01561 CBS_like CBS_like: Thi 37.3 2.6E+02 0.0057 24.1 8.8 52 147-199 54-107 (291)
447 PLN02591 tryptophan synthase 37.2 2.7E+02 0.0059 24.0 9.4 73 158-234 94-170 (250)
448 KOG1429 dTDP-glucose 4-6-dehyd 36.8 60 0.0013 29.0 4.4 41 144-184 25-65 (350)
449 PF00290 Trp_syntA: Tryptophan 36.7 2.1E+02 0.0045 24.9 7.7 75 158-236 103-181 (259)
450 PRK05752 uroporphyrinogen-III 36.6 58 0.0013 27.8 4.4 60 170-229 3-66 (255)
451 PRK07067 sorbitol dehydrogenas 36.1 1.8E+02 0.0039 24.2 7.3 76 147-225 7-87 (257)
452 PRK11302 DNA-binding transcrip 34.8 2.8E+02 0.006 23.7 8.4 19 214-232 198-216 (284)
453 PRK05752 uroporphyrinogen-III 34.7 2E+02 0.0044 24.3 7.5 93 134-228 93-192 (255)
454 PF01555 N6_N4_Mtase: DNA meth 34.3 1.3E+02 0.0029 24.2 6.1 46 155-200 177-222 (231)
455 cd05008 SIS_GlmS_GlmD_1 SIS (S 34.3 91 0.002 23.0 4.7 8 190-197 72-79 (126)
456 PRK02261 methylaspartate mutas 34.1 1.7E+02 0.0037 22.6 6.3 40 159-198 20-61 (137)
457 PRK06483 dihydromonapterin red 34.0 2.6E+02 0.0057 22.8 8.0 52 148-199 4-55 (236)
458 PF02602 HEM4: Uroporphyrinoge 33.6 70 0.0015 26.4 4.3 95 132-228 81-178 (231)
459 PRK06482 short chain dehydroge 33.5 2.4E+02 0.0052 23.7 7.8 75 148-225 4-83 (276)
460 PRK07102 short chain dehydroge 33.5 2.4E+02 0.0052 23.1 7.6 74 148-224 3-82 (243)
461 PRK01178 rps24e 30S ribosomal 33.0 58 0.0012 24.0 3.2 24 128-151 30-53 (99)
462 PRK06841 short chain dehydroge 32.9 2.6E+02 0.0056 23.1 7.8 79 144-225 13-96 (255)
463 PRK08862 short chain dehydroge 32.7 1.7E+02 0.0036 24.3 6.5 65 147-214 6-73 (227)
464 TIGR00649 MG423 conserved hypo 32.7 1.8E+02 0.0039 26.9 7.2 79 147-226 287-383 (422)
465 PF02594 DUF167: Uncharacteris 32.3 53 0.0012 22.9 2.8 26 131-156 42-67 (77)
466 PRK08057 cobalt-precorrin-6x r 32.2 3.1E+02 0.0067 23.5 8.1 98 147-246 128-245 (248)
467 PRK05717 oxidoreductase; Valid 32.2 2E+02 0.0042 23.9 6.9 53 147-199 11-63 (255)
468 PRK05872 short chain dehydroge 32.0 2.8E+02 0.0062 23.8 8.1 76 145-223 8-90 (296)
469 PRK08265 short chain dehydroge 31.7 3.1E+02 0.0067 22.9 9.8 75 147-224 7-86 (261)
470 COG4229 Predicted enolase-phos 31.4 1.8E+02 0.0039 24.2 6.0 98 131-233 105-213 (229)
471 KOG1199 Short-chain alcohol de 31.3 1.4E+02 0.0029 24.7 5.3 58 150-207 13-70 (260)
472 cd05710 SIS_1 A subgroup of th 31.1 97 0.0021 23.0 4.4 8 218-225 74-81 (120)
473 PF10087 DUF2325: Uncharacteri 30.9 2E+02 0.0043 20.5 7.5 63 180-249 12-75 (97)
474 cd02070 corrinoid_protein_B12- 30.8 3E+02 0.0065 22.5 8.3 41 182-226 101-141 (201)
475 COG4143 TbpA ABC-type thiamine 30.7 1.3E+02 0.0028 27.1 5.6 26 208-233 146-172 (336)
476 PRK12935 acetoacetyl-CoA reduc 30.6 2.7E+02 0.0059 22.8 7.5 76 147-225 7-91 (247)
477 COG0159 TrpA Tryptophan syntha 30.6 3.7E+02 0.008 23.5 9.1 76 157-236 109-188 (265)
478 TIGR01136 cysKM cysteine synth 30.4 3.7E+02 0.0079 23.4 8.8 53 147-199 59-112 (299)
479 PLN02654 acetate-CoA ligase 30.4 5.3E+02 0.011 25.2 10.7 56 167-226 142-200 (666)
480 COG2099 CobK Precorrin-6x redu 30.4 2E+02 0.0044 24.9 6.5 71 149-227 5-76 (257)
481 PRK06194 hypothetical protein; 30.3 3.3E+02 0.0071 23.0 8.1 76 147-225 7-90 (287)
482 PTZ00237 acetyl-CoA synthetase 30.1 5.2E+02 0.011 25.1 10.4 56 167-226 114-172 (647)
483 TIGR03772 anch_rpt_subst ancho 29.9 3.9E+02 0.0085 25.5 9.0 54 169-225 370-427 (479)
484 cd00640 Trp-synth-beta_II Tryp 29.9 3.3E+02 0.0071 22.7 8.6 52 147-199 51-104 (244)
485 PRK08589 short chain dehydroge 29.6 2.4E+02 0.0053 23.8 7.2 52 147-199 7-61 (272)
486 PRK08811 uroporphyrinogen-III 29.4 1E+02 0.0023 26.6 4.8 61 168-228 16-79 (266)
487 PRK05867 short chain dehydroge 29.0 2.1E+02 0.0047 23.7 6.6 79 144-225 7-93 (253)
488 COG0365 Acs Acyl-coenzyme A sy 28.9 3E+02 0.0064 26.6 8.1 81 145-228 185-273 (528)
489 PRK06079 enoyl-(acyl carrier p 28.8 2.4E+02 0.0051 23.6 6.9 31 147-177 8-40 (252)
490 KOG3424 40S ribosomal protein 28.7 80 0.0017 24.1 3.3 25 127-151 33-57 (132)
491 TIGR01217 ac_ac_CoA_syn acetoa 28.3 3.6E+02 0.0077 26.3 8.8 33 166-198 159-193 (652)
492 TIGR02746 TraC-F-type type-IV 28.3 1.2E+02 0.0025 30.6 5.5 46 153-199 441-486 (797)
493 KOG1371 UDP-glucose 4-epimeras 28.3 1.9E+02 0.0042 26.2 6.2 73 146-221 2-80 (343)
494 PRK09375 quinolinate synthetas 28.0 1.7E+02 0.0036 26.3 5.9 77 148-230 139-217 (319)
495 COG2235 ArcA Arginine deiminas 28.0 1.5E+02 0.0032 27.6 5.6 67 131-199 314-387 (409)
496 PF13460 NAD_binding_10: NADH( 27.8 2.9E+02 0.0063 21.4 7.2 69 149-227 1-69 (183)
497 PRK05090 hypothetical protein; 27.4 68 0.0015 23.4 2.7 27 131-157 48-74 (95)
498 cd02072 Glm_B12_BD B12 binding 27.0 2.9E+02 0.0064 21.2 6.5 37 186-226 22-58 (128)
499 PRK06484 short chain dehydroge 27.0 3E+02 0.0064 25.8 7.8 73 148-223 7-84 (520)
500 PRK12838 carbamoyl phosphate s 27.0 2.8E+02 0.0061 25.2 7.3 54 170-231 167-222 (354)
No 1
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=2.5e-29 Score=228.96 Aligned_cols=185 Identities=75% Similarity=1.255 Sum_probs=164.0
Q ss_pred hccCCCChHHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHH
Q 025730 58 QRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAA 137 (249)
Q Consensus 58 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~ 137 (249)
+.......+++..+.++.+|.++..+...++++|....++|+|+.|+|++++|+.+.+++......+.||+++..+||++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~~~~Yp~~~~~~lr~~ 94 (380)
T PLN03026 15 KQSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMKFPYVYPDPESRRLRAA 94 (380)
T ss_pred cccccHhHHhhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhHhhccCCCCCHHHHHHH
Confidence 34466778889999999999777778888888887778999999999999999999999876433467998888999999
Q ss_pred HHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccC
Q 025730 138 LAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE 217 (249)
Q Consensus 138 la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~ 217 (249)
+++++++++++|++|+|++++|.+++..++++||+|++++|+|..|...++..|++++.++.++++.+|++++++++...
T Consensus 95 ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~ 174 (380)
T PLN03026 95 LAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH 174 (380)
T ss_pred HHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999998777899999999998437
Q ss_pred CceEEEEcCCCCccccCCChHHHHH
Q 025730 218 KPKCIFLTSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 218 ~~k~i~l~~PnNPTG~~~~~~e~i~ 242 (249)
++++|++||||||||.+++.+++.+
T Consensus 175 ~~~~v~l~~P~NPTG~~~~~~~l~~ 199 (380)
T PLN03026 175 KPKLLFLTSPNNPDGSIISDDDLLK 199 (380)
T ss_pred CCcEEEEeCCCCCCCCCCCHHHHHH
Confidence 8999999999999999987665543
No 2
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=222.18 Aligned_cols=168 Identities=45% Similarity=0.767 Sum_probs=148.5
Q ss_pred HHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcC-CC
Q 025730 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSG-LE 145 (249)
Q Consensus 68 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~-~~ 145 (249)
++.+.++.+|.++ +...|. +++++|+.||||+++|+.+.+++.. ....++||++...+|+++++++++ ++
T Consensus 3 ~~~i~~l~~y~~~------~~~~g~--~~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~~~~~l~~a~a~~~~~~~ 74 (356)
T COG0079 3 RPLVRDLPPYVPG------ARQYGL--PGIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDPDYRELRAALAEYYGVVD 74 (356)
T ss_pred chhhhhccCCCCc------ccccCC--ccceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCCCC
Confidence 4566777888653 233333 3789999999999999999999886 555689999999999999999999 88
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEc
Q 025730 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (249)
Q Consensus 146 ~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~ 225 (249)
+++|++++|++++|.+++++++.+||+|+++.|+|.+|...++..|++++.++..+ |.+|++.+.++++ .++++||+|
T Consensus 75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~-~~~~lv~i~ 152 (356)
T COG0079 75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIR-DKTKLVFLC 152 (356)
T ss_pred cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhh-cCCCEEEEe
Confidence 89999999999999999999999999999999999999999999999999999877 9999999999998 489999999
Q ss_pred CCCCccccCCChHHHHHHHh
Q 025730 226 SPNNPDGRFSWTSSWIWGIS 245 (249)
Q Consensus 226 ~PnNPTG~~~~~~e~i~~i~ 245 (249)
|||||||..++.+++.+.+.
T Consensus 153 nPNNPTG~~~~~~~l~~l~~ 172 (356)
T COG0079 153 NPNNPTGTLLPREELRALLE 172 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHH
Confidence 99999999988877765543
No 3
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=3.4e-28 Score=220.60 Aligned_cols=169 Identities=31% Similarity=0.547 Sum_probs=145.0
Q ss_pred HHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCC
Q 025730 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD 147 (249)
Q Consensus 69 ~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~ 147 (249)
..+..+.+|.+...........+ ..++|+|+.|+|++++|+.+++++.+ +.....||+.|..+||++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~g~~~Lr~aia~~~~~~~~ 82 (366)
T PRK01533 5 DQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDGGATTLRQTIANKLHVKME 82 (366)
T ss_pred hhhhcCCCCCCCCChHHHHHhcC--CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCCCHHHHHHHHHHHhCCCcc
Confidence 45566667755544444444433 36789999999999999999999875 3334568988999999999999999999
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCC
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~P 227 (249)
+|++|+|++++|.+++++++++||+|++++|+|..|...++..|++++.++.+ ++.+|+++++++++ .++++|+||||
T Consensus 83 ~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~-~~~~~v~i~~P 160 (366)
T PRK01533 83 QVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD-NDTKIVWICNP 160 (366)
T ss_pred eEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC-cCCcEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999984 56799999999987 68999999999
Q ss_pred CCccccCCChHHHH
Q 025730 228 NNPDGRFSWTSSWI 241 (249)
Q Consensus 228 nNPTG~~~~~~e~i 241 (249)
|||||.+++.+++.
T Consensus 161 ~NPTG~~~~~~~l~ 174 (366)
T PRK01533 161 NNPTGTYVNDRKLT 174 (366)
T ss_pred CCCCCCCcCHHHHH
Confidence 99999999877653
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.5e-28 Score=221.48 Aligned_cols=154 Identities=31% Similarity=0.502 Sum_probs=138.0
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCCC-CC-CCcChHHHHHHHHHHc----C--CCCCC-EEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPY-IY-PDPESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~-~Y-p~~g~~~lr~~la~~~----~--~~~~~-I~vt~Ga~~~l~~~~~ 164 (249)
.++|+|+.|++++++|+.+.+++.. +..+. .| |..|.++||+++++++ | +++++ |++|+|++++|.+++.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence 6799999999999999999998876 44432 55 7789999999999987 3 55655 9999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC---CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH-
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW- 240 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~---~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~- 240 (249)
++++|||+|++++|.|..|.......|++++.+++. .+|.+|+++|+++++ +++|+|+||+||||||.+++.+++
T Consensus 108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~-~ktk~i~ln~P~NPTGav~~~~~l~ 186 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT-PKTKAIILNSPNNPTGAVYSKEELK 186 (393)
T ss_pred HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC-ccceEEEEeCCCCCcCcCCCHHHHH
Confidence 999999999999999999999999999999999953 489999999999999 599999999999999999999855
Q ss_pred -HHHHhhhhC
Q 025730 241 -IWGISSEHN 249 (249)
Q Consensus 241 -i~~i~~~~~ 249 (249)
+..+|++||
T Consensus 187 ~i~~~a~~~~ 196 (393)
T COG0436 187 AIVELAREHD 196 (393)
T ss_pred HHHHHHHHcC
Confidence 788888875
No 5
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.2e-26 Score=206.56 Aligned_cols=171 Identities=30% Similarity=0.487 Sum_probs=147.4
Q ss_pred HhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCC
Q 025730 70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDH 148 (249)
Q Consensus 70 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~ 148 (249)
++....+|.++..+..++..++..+.++|+|+.|+|++++|+.+.+++.+ +.....||+.+..+||+++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~ 84 (357)
T PRK14809 5 DLSDHVAYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKASHADLTAALADRWDVSPEQ 84 (357)
T ss_pred hhhcCCCcCCCCCHHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHhCCCcce
Confidence 44556666666677788888887777899999999999999999988875 43446798888999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
|++|+|++++|.+++++++++||.|++++|+|..|...++..|++++.++.+ +++.+|++++.+... ++|+|++||
T Consensus 85 I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~--~~k~i~l~~ 162 (357)
T PRK14809 85 VWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD--GERIVYLTS 162 (357)
T ss_pred EEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc--CCcEEEEeC
Confidence 9999999999999999999999999999999999998888899999988863 457788888887653 689999999
Q ss_pred CCCccccCCChHHHHH
Q 025730 227 PNNPDGRFSWTSSWIW 242 (249)
Q Consensus 227 PnNPTG~~~~~~e~i~ 242 (249)
||||||.+++.+++.+
T Consensus 163 p~NPTG~~~s~~~~~~ 178 (357)
T PRK14809 163 PHNPTGSEIPLDEVEA 178 (357)
T ss_pred CCCCCCcCCCHHHHHH
Confidence 9999999998876543
No 6
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.94 E-value=2.9e-26 Score=203.91 Aligned_cols=162 Identities=30% Similarity=0.424 Sum_probs=138.3
Q ss_pred HHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhc-cC--CCCC-CCcChHHHHHHHHHHc----C---CCCCCEEE
Q 025730 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDS----G---LESDHILV 151 (249)
Q Consensus 83 ~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~-~~--~~~Y-p~~g~~~lr~~la~~~----~---~~~~~I~v 151 (249)
+..++.+++.+.. |+.|.+++++|+.+.+++.+. .. .++| +..|.++|+++|++.+ | ...++|+|
T Consensus 23 ~~~la~e~~~~~~----LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlV 98 (420)
T KOG0257|consen 23 INRLAAEHKVPNP----LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLV 98 (420)
T ss_pred HHHHHHhcCCCCc----ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEE
Confidence 3444444444222 999999999999999999873 22 3677 6678888888888765 3 34568999
Q ss_pred eCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--------CCCCCCHHHHHHhhccCCceEEE
Q 025730 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFSLNVELIADAVEREKPKCIF 223 (249)
Q Consensus 152 t~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--------~~~~id~e~l~~~i~~~~~k~i~ 223 (249)
|.|+.++|..++++++++||+|++.+|.|..|.....++|++++.|+.. .+|.+|+++++.+++ ++||+|+
T Consensus 99 T~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-~kTk~Ii 177 (420)
T KOG0257|consen 99 TAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-EKTKAII 177 (420)
T ss_pred ecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-CCccEEE
Confidence 9999999999999999999999999999999999999999999999843 679999999999999 7999999
Q ss_pred EcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 224 LTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 224 l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
+|+||||||.+++++++ +++||++||
T Consensus 178 ~ntPhNPtGkvfsReeLe~ia~l~~k~~ 205 (420)
T KOG0257|consen 178 LNTPHNPTGKVFSREELERIAELCKKHG 205 (420)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCC
Confidence 99999999999999855 899999986
No 7
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.94 E-value=4.9e-26 Score=215.07 Aligned_cols=181 Identities=23% Similarity=0.336 Sum_probs=149.8
Q ss_pred HHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCC---CCCCCHHHHHHHHh-ccCCCCCCC-cChHHHHHHHHHH
Q 025730 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKD 141 (249)
Q Consensus 67 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~---~~~~p~~v~~al~~-~~~~~~Yp~-~g~~~lr~~la~~ 141 (249)
.++++..+.++ ....+...+.+....+.++|+|+.|++ .+++|+.+.+++.+ +.....|++ .|..+||++|+++
T Consensus 119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~ 197 (517)
T PRK13355 119 KSHKLDNVLYD-VRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQY 197 (517)
T ss_pred hhHHhhccCcc-HHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHH
Confidence 56666666644 333444555555555678999999876 46778988888865 444467976 4799999999999
Q ss_pred c------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHh
Q 025730 142 S------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA 213 (249)
Q Consensus 142 ~------~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~ 213 (249)
+ ++++++|++|+|++++|.+++.+++++||+|++++|+|..|...++..|++++.++.+ .+|.+|+++++++
T Consensus 198 ~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 277 (517)
T PRK13355 198 AQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSK 277 (517)
T ss_pred HHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHh
Confidence 8 6789999999999999999999999999999999999999999999999999999854 4588999999999
Q ss_pred hccCCceEEEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 214 VEREKPKCIFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 214 i~~~~~k~i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
++ .++|+|++||||||||.+++.+++ +..+|++||
T Consensus 278 ~~-~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~ 314 (517)
T PRK13355 278 IT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQ 314 (517)
T ss_pred cC-cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcC
Confidence 97 689999999999999999987754 566788765
No 8
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.4e-25 Score=202.21 Aligned_cols=164 Identities=30% Similarity=0.517 Sum_probs=138.7
Q ss_pred ChHHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHHcC
Q 025730 64 DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSG 143 (249)
Q Consensus 64 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~~~ 143 (249)
..+.+..+..+.+|.+.... .....|+|+.|+||+++++.+ .....++||+....+|++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~Nenp~~~~~~~-----~~~~~~~Yp~~~~~~l~~~~a~~~g 71 (351)
T PRK01688 6 TDLARENVRALTPYQSARRL---------GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAAYAG 71 (351)
T ss_pred HHHhhHHhhcCCCCCCCCcc---------CCCCceEecCCCCCCCCChhh-----cccccccCCCCChHHHHHHHHHHhC
Confidence 34566778888888543211 123469999999999988754 2223478999888999999999999
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEE
Q 025730 144 LESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (249)
Q Consensus 144 ~~~~~I~vt~Ga~~~l~~~~~~~~~pG-d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i 222 (249)
+++++|++|+|++++|.+++++++++| |+|++++|+|..|...++..|++++.++.++++.+|++++++++ .++++|
T Consensus 72 ~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~--~~~~lv 149 (351)
T PRK01688 72 VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL--DGVKVV 149 (351)
T ss_pred CCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc--cCCcEE
Confidence 999999999999999999999999997 99999999999999999999999999998778999999999987 379999
Q ss_pred EEcCCCCccccCCChHHHHHH
Q 025730 223 FLTSPNNPDGRFSWTSSWIWG 243 (249)
Q Consensus 223 ~l~~PnNPTG~~~~~~e~i~~ 243 (249)
+|||||||||.+++.+++.+.
T Consensus 150 ~l~nPnNPTG~~~~~~~l~~l 170 (351)
T PRK01688 150 YVCSPNNPTGNLINPQDLRTL 170 (351)
T ss_pred EEeCCCCCCCCCCCHHHHHHH
Confidence 999999999999877765443
No 9
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.1e-25 Score=201.26 Aligned_cols=172 Identities=34% Similarity=0.661 Sum_probs=148.1
Q ss_pred HHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCC
Q 025730 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL 144 (249)
Q Consensus 66 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~ 144 (249)
.++..+..+.+|.++..+...++.++ ..++|+|+.|+|++++++.+.+++.+ .....+|++....+||+++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g~~lr~~ia~~~~~ 86 (371)
T PRK05166 9 LARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQGRALREAIAARTGV 86 (371)
T ss_pred hhhHHHhcCCCCCCCCCHHHHHHhcC--CcceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCc
Confidence 34456677777877666666665554 45789999999999999999998876 2334679876446999999999999
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEE
Q 025730 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (249)
Q Consensus 145 ~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l 224 (249)
++++|++|+|++++|.+++.+++++||+|+++.|+|..|...++..|++++.++.+.++++|+++++++++ .++|+|++
T Consensus 87 ~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l 165 (371)
T PRK05166 87 PADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVA-RAPRMLMF 165 (371)
T ss_pred CHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhh-cCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999987778999999999987 68899999
Q ss_pred cCCCCccccCCChHHH
Q 025730 225 TSPNNPDGRFSWTSSW 240 (249)
Q Consensus 225 ~~PnNPTG~~~~~~e~ 240 (249)
+|||||||.+++.+++
T Consensus 166 ~~p~NPtG~~~~~~~~ 181 (371)
T PRK05166 166 SNPSNPVGSWLTADQL 181 (371)
T ss_pred eCCCCCCCCCCCHHHH
Confidence 9999999999877655
No 10
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.6e-25 Score=200.62 Aligned_cols=169 Identities=38% Similarity=0.688 Sum_probs=145.6
Q ss_pred HHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCC
Q 025730 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD 147 (249)
Q Consensus 69 ~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~ 147 (249)
+++..+.+|.++..+...+.+++. .++|+|+.|++++++++.+.+++.+ +.....||+.+..+||++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~g~~~lr~~ia~~~~~~~~ 82 (359)
T PRK03158 5 EQLNQLSAYQPGKSIEEVKREYGL--EKIVKLASNENPYGPSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHLGVDEE 82 (359)
T ss_pred hhhhccCCCCCCCCHHHHHHhcCC--CceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCCCHH
Confidence 455666777665556566666654 3789999999999999999998876 4333456888899999999999999999
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCC
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~P 227 (249)
+|++|+|+++++.+++++++++||+|++++|+|..|...+...|++++.++.+ ++++|++.++++++ .++++++++||
T Consensus 83 ~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~i~~p 160 (359)
T PRK03158 83 QLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNP 160 (359)
T ss_pred HEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-CCCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999986 67899999999887 68999999999
Q ss_pred CCccccCCChHHHH
Q 025730 228 NNPDGRFSWTSSWI 241 (249)
Q Consensus 228 nNPTG~~~~~~e~i 241 (249)
|||||.+++.+++.
T Consensus 161 ~NPtG~~~~~~~l~ 174 (359)
T PRK03158 161 NNPTGTYVNHEELL 174 (359)
T ss_pred CCCCCCCCCHHHHH
Confidence 99999998776543
No 11
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.1e-25 Score=203.06 Aligned_cols=159 Identities=22% Similarity=0.350 Sum_probs=136.5
Q ss_pred hCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccC--CCCCCCcChHHHHHHHHHHcC------CCC-CCEEEeCCHHHHH
Q 025730 90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSG------LES-DHILVGCGADELI 159 (249)
Q Consensus 90 ~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~--~~~Yp~~g~~~lr~~la~~~~------~~~-~~I~vt~Ga~~~l 159 (249)
......++|+|+.|++++++++.+.+++.+ +.. .+.|+..|..+||++++++++ +++ ++|++|+|++++|
T Consensus 27 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 27 KIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred hhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 333456789999999999999999988876 322 245666789999999999973 677 7999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCCh
Q 025730 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~ 237 (249)
.+++.+++++||+|++++|+|..|...++..|++++.++.++ +|.+|++++++++. .++|+|++||||||||.+++.
T Consensus 107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s~ 185 (399)
T PRK07681 107 VHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-DKAKMMILNFPGNPVPAMAHE 185 (399)
T ss_pred HHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCcCcCCCH
Confidence 999999999999999999999999999999999999999653 46789999999886 689999999999999999988
Q ss_pred HHH--HHHHhhhhC
Q 025730 238 SSW--IWGISSEHN 249 (249)
Q Consensus 238 ~e~--i~~i~~~~~ 249 (249)
+++ +.++|++||
T Consensus 186 ~~~~~i~~~a~~~~ 199 (399)
T PRK07681 186 DFFKEVIAFAKKHN 199 (399)
T ss_pred HHHHHHHHHHHHcC
Confidence 755 566788765
No 12
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.1e-25 Score=199.93 Aligned_cols=147 Identities=37% Similarity=0.646 Sum_probs=133.1
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccC--CCCCCCcChHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCCC
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPG 170 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~--~~~Yp~~g~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~~~~~~~~~pG 170 (249)
.++|+|+.|+|++++|+.+++++.+ +.. ..+||+.+..+||++++++++++. ++|++|+|++++|.+++++++++|
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~g 105 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPG 105 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999986 432 367988888999999999999865 489999999999999999999999
Q ss_pred CeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHH
Q 025730 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 171 d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i 241 (249)
|+|++++|+|..|...++..|++++.++.++++++|++++++++++.++|+|++||||||||.+++.+++.
T Consensus 106 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~ 176 (356)
T PRK04870 106 ATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVE 176 (356)
T ss_pred CEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999998778899999999999756899999999999999998776553
No 13
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.93 E-value=3.2e-25 Score=202.74 Aligned_cols=156 Identities=23% Similarity=0.350 Sum_probs=135.6
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCC-cChHHHHHHHHHHc----C---CCCC-CEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKDS----G---LESD-HILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~-~g~~~lr~~la~~~----~---~~~~-~I~vt~Ga~~~l~~~ 162 (249)
.+.++|+|+.|++++++++.+.+++.+ +.....|++ .|..+||+++++++ | ++++ +|++|+|++++|.++
T Consensus 27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~ 106 (396)
T PRK09147 27 ADLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF 106 (396)
T ss_pred cCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence 356889999999999999999999876 444477975 47899999999986 6 5564 899999999999999
Q ss_pred HHHhcCC---CCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCCh
Q 025730 163 MRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 163 ~~~~~~p---Gd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~ 237 (249)
++++++| ||.|++++|+|..|...++..|++++.||.+ ++|.+|++++++.+. .++|++++||||||||.+++.
T Consensus 107 ~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~~~s~ 185 (396)
T PRK09147 107 AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW-ARTQLLFVCSPGNPTGAVLPL 185 (396)
T ss_pred HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-hccEEEEEcCCCCCcCccCCH
Confidence 9999999 8999999999999999999999999999964 347899999998886 589999999999999999998
Q ss_pred HHH--HHHHhhhhC
Q 025730 238 SSW--IWGISSEHN 249 (249)
Q Consensus 238 ~e~--i~~i~~~~~ 249 (249)
+++ +.++|++||
T Consensus 186 ~~~~~l~~~a~~~~ 199 (396)
T PRK09147 186 DDWKKLFALSDRYG 199 (396)
T ss_pred HHHHHHHHHHHHcC
Confidence 855 566787765
No 14
>PRK09105 putative aminotransferase; Provisional
Probab=99.93 E-value=2.5e-25 Score=202.03 Aligned_cols=147 Identities=29% Similarity=0.463 Sum_probs=132.2
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCe
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~ 172 (249)
.++.++|+.|+|++++|+.+.+++.+ .....+||+.+..+||+++++++|+++++|++|+|++++|.+++.+++++||+
T Consensus 42 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~ 121 (370)
T PRK09105 42 AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAG 121 (370)
T ss_pred CCCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCE
Confidence 46789999999999999999999875 33335788777899999999999999999999999999999999999999999
Q ss_pred EEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHH
Q 025730 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 173 Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~ 242 (249)
|++++|+|..|...++..|++++.++.+.++.+|++++++. . .++++|++||||||||.+++.+++.+
T Consensus 122 Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~-~~~~~v~l~nP~NPTG~~~~~~~l~~ 189 (370)
T PRK09105 122 LVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-D-PNAGLIYICNPNNPTGTVTPRADIEW 189 (370)
T ss_pred EEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-C-CCCCEEEEeCCCCCCCcCcCHHHHHH
Confidence 99999999999999999999999999877888999999887 3 57899999999999999988776643
No 15
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=8.8e-25 Score=197.04 Aligned_cols=182 Identities=41% Similarity=0.700 Sum_probs=155.9
Q ss_pred HHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCC
Q 025730 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL 144 (249)
Q Consensus 66 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~ 144 (249)
.+..++..+.+|.+.......+.++|.++.++|+|+.|+|++++++.+.+++.+ ......||++...+||+++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~ 84 (361)
T PRK00950 5 KIRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEPDAPELREALSKYTGV 84 (361)
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC
Confidence 345677777888766667777888887777899999999999999999888875 3334678877779999999999999
Q ss_pred CCCCEEE-eCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEE
Q 025730 145 ESDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (249)
Q Consensus 145 ~~~~I~v-t~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~ 223 (249)
++++|++ |+|+++++.++++.++++||+|++++|+|..|...++..|++++.++.++++.+|++++++.++ .++++|+
T Consensus 85 ~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~ 163 (361)
T PRK00950 85 PVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIF 163 (361)
T ss_pred CHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-cCCCEEE
Confidence 9999999 8999999999999999999999999999999998889999999999977778999999999987 6899999
Q ss_pred EcCCCCccccCCChHHHHHHHhhhhC
Q 025730 224 LTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 224 l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++|||||||.+++.++ +.++|+++|
T Consensus 164 ~~~p~nptG~~~~~~~-l~~l~~~~~ 188 (361)
T PRK00950 164 LCTPNNPTGNLIPEED-IRKILESTD 188 (361)
T ss_pred EeCCCCCCCCCcCHHH-HHHHHHHCC
Confidence 9999999999976654 555666653
No 16
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.93 E-value=6.9e-25 Score=199.93 Aligned_cols=156 Identities=20% Similarity=0.273 Sum_probs=134.6
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC-cChHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~la~~~----~--~~~~-~I~vt~Ga~~~l~~ 161 (249)
.+.++|+|+.|++++++++.+.+++.+ +. ....|++ .|..+||+++++++ | ++++ +|++|+|++++|.+
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~ 107 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAH 107 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHH
Confidence 456789999999999999999998876 32 2356854 68999999999997 4 6787 69999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
++++++++||+|++++|+|..|...++..|++++.++.+. ++.+|++++++.+. .++|+|++||||||||.+++.++
T Consensus 108 ~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPTG~~~s~~~ 186 (388)
T PRK07366 108 LPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-AQARLMVLSYPHNPTTAIAPLSF 186 (388)
T ss_pred HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-ccceEEEEeCCCCCCCccCCHHH
Confidence 9999999999999999999999999999999999999753 46789999988876 57999999999999999999886
Q ss_pred H--HHHHhhhhC
Q 025730 240 W--IWGISSEHN 249 (249)
Q Consensus 240 ~--i~~i~~~~~ 249 (249)
+ +..+|++||
T Consensus 187 ~~~l~~~a~~~~ 198 (388)
T PRK07366 187 FQEAVAFCQQHD 198 (388)
T ss_pred HHHHHHHHHHcC
Confidence 5 556787764
No 17
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=6.9e-25 Score=198.62 Aligned_cols=150 Identities=29% Similarity=0.494 Sum_probs=132.8
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHh-cc----CCCCCCCcChHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~-~~----~~~~Yp~~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
..|+|+.|+|++++|+.+.+++.+ +. ...+||+.+..+||+++++++ ++++++|++|+|++++|.++++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~ 106 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ 106 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence 469999999999999999999875 22 236899888899999999998 5788999999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHH
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGI 244 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i 244 (249)
+++++||.|+++.|+|..|...++..|.+++.++.++++++|++++++++++.++|+|+++|||||||.+++.+++ .+|
T Consensus 107 ~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l-~~l 185 (368)
T PRK03317 107 AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDV-EAI 185 (368)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHH-HHH
Confidence 9999999999999999999999999999999998777889999999999975688999999999999999876654 344
Q ss_pred hh
Q 025730 245 SS 246 (249)
Q Consensus 245 ~~ 246 (249)
++
T Consensus 186 ~~ 187 (368)
T PRK03317 186 LD 187 (368)
T ss_pred HH
Confidence 43
No 18
>PLN02368 alanine transaminase
Probab=99.93 E-value=3.3e-25 Score=203.58 Aligned_cols=182 Identities=16% Similarity=0.243 Sum_probs=145.7
Q ss_pred HHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCC--------C----------------------CCCHHHHHH
Q 025730 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENP--------Y----------------------GPPPEVREA 116 (249)
Q Consensus 67 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~--------~----------------------~~p~~v~~a 116 (249)
+++++..+.++ ....+...+.+....+.++|+|++|+|+ | .+++.+.++
T Consensus 11 ~~~~~~~~~~~-~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a 89 (407)
T PLN02368 11 LNENVKKCQYA-VRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA 89 (407)
T ss_pred cCHHHHhhhhh-cCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH
Confidence 44556655554 3455667777665556789999999986 3 255566666
Q ss_pred HHhc---c-CCCCCCC-cChHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCChhHH
Q 025730 117 LGQL---K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYE 184 (249)
Q Consensus 117 l~~~---~-~~~~Yp~-~g~~~lr~~la~~~----~--~~~~~I~vt~Ga~~~l~~~~~~~~-~pGd~Vlv~~P~y~~~~ 184 (249)
+..+ . ....|++ .|.++||+++++++ | +++++|++|+|++++|.+++.+++ +|||+|++++|+|..|.
T Consensus 90 ~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~ 169 (407)
T PLN02368 90 KHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS 169 (407)
T ss_pred HHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH
Confidence 6543 1 2357965 57899999999997 5 578999999999999999999987 79999999999999999
Q ss_pred HHHHHCCCEEEEecCC--CCCCCCHHHHHHhhcc-----CCceEEEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 185 FDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 185 ~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~-----~~~k~i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
..++..|++++.++.+ ++|++|++.+++++++ .++|++++||||||||.+++.+++ +..+|++||
T Consensus 170 ~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~ 243 (407)
T PLN02368 170 ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQER 243 (407)
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 9999999999999964 3589999999999862 168999999999999999998865 566788765
No 19
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=1.4e-24 Score=196.08 Aligned_cols=166 Identities=27% Similarity=0.380 Sum_probs=138.4
Q ss_pred CCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHH
Q 025730 79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157 (249)
Q Consensus 79 ~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~ 157 (249)
++..+...+...|....++|+|+.|+|++++|+.+.+++.+ +....+||+++..+||+++|+++++++++|++|+|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~ 85 (360)
T PRK07392 6 HGGNLAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSALRHYPDPDYRELRLALAQHHQLPPEWILPGNGAAE 85 (360)
T ss_pred CCccHHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHH
Confidence 44555555667777777899999999999999999999875 43456798777789999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCC-----CCHHHHHHhhccCCceEEEEcCCCCccc
Q 025730 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-----LNVELIADAVEREKPKCIFLTSPNNPDG 232 (249)
Q Consensus 158 ~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~-----id~e~l~~~i~~~~~k~i~l~~PnNPTG 232 (249)
+|.++++++. +||.|++++|+|..|...++..|++++.++.+.++. .+++++++.. .+++++++||||||||
T Consensus 86 ~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG 162 (360)
T PRK07392 86 LLTWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTG 162 (360)
T ss_pred HHHHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc--cCCCEEEEeCCCCCCC
Confidence 9999999864 789999999999999999999999999999754433 4677776654 4689999999999999
Q ss_pred cCCChHHHHHHHhhhh
Q 025730 233 RFSWTSSWIWGISSEH 248 (249)
Q Consensus 233 ~~~~~~e~i~~i~~~~ 248 (249)
.+++.+++ ..+++++
T Consensus 163 ~~~~~~~l-~~l~~~~ 177 (360)
T PRK07392 163 KLWSREAI-LPLLEQF 177 (360)
T ss_pred CCcCHHHH-HHHHHHC
Confidence 99986654 5556655
No 20
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=1.1e-24 Score=196.64 Aligned_cols=167 Identities=26% Similarity=0.404 Sum_probs=140.7
Q ss_pred CCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHH
Q 025730 79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157 (249)
Q Consensus 79 ~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~ 157 (249)
+++.+...+.+++.+..++++|+.|+|++++|+.+++++.+ +....+||+.+..+||+++|+++++++++|++|+|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~ 83 (356)
T PRK08056 4 HGGNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPASWILAGNGETE 83 (356)
T ss_pred CCccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcCccHHHHHHHHHHHhCcChhhEEECCCHHH
Confidence 56667778888888778899999999999999999999876 33346798878899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccCC
Q 025730 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFS 235 (249)
Q Consensus 158 ~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~ 235 (249)
++.++++.+ .+|| +++++|+|..|...++..|++++.++.+. ++.+| +++++.+. +++|+|+++|||||||.++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p~NPTG~~~ 159 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLP 159 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-CCCCEEEEeCCcCCCCCCC
Confidence 999999876 6776 77789999999999999999999999643 45566 45666666 7899999999999999998
Q ss_pred ChHHH--HHHHhhhhC
Q 025730 236 WTSSW--IWGISSEHN 249 (249)
Q Consensus 236 ~~~e~--i~~i~~~~~ 249 (249)
+.+++ +.++|+++|
T Consensus 160 ~~~~~~~i~~~a~~~~ 175 (356)
T PRK08056 160 ERQLLQAIAERCKSLN 175 (356)
T ss_pred CHHHHHHHHHHHHhcC
Confidence 87654 566777764
No 21
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=9.3e-25 Score=198.42 Aligned_cols=170 Identities=29% Similarity=0.481 Sum_probs=139.2
Q ss_pred HHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccC---CCCCCCcChHHHHHHHHHHc
Q 025730 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPDPESRRLRAALAKDS 142 (249)
Q Consensus 67 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~---~~~Yp~~g~~~lr~~la~~~ 142 (249)
.+..+..+.+|.+..... .. .+ ...+++|+.|+|++++|+.+.+++.+ +.. ..+||+.|..+||+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--~~-~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~ 79 (374)
T PRK02610 5 LRSDLAQLKAYHPHPSGD--AD-DA--VIQLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYV 79 (374)
T ss_pred hHHHHhhcCCCCCCCchh--hh-hc--ccceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHh
Confidence 345566667764332110 00 01 13579999999999999999999875 332 25798888999999999998
Q ss_pred C--------CCCCCEEEeCCHHHHHHHHHHHhcCCCC-eEEEcCCCChhHHHHHHHCCCEEEEecCCC-CCCCCHHHHHH
Q 025730 143 G--------LESDHILVGCGADELIDLIMRCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD 212 (249)
Q Consensus 143 ~--------~~~~~I~vt~Ga~~~l~~~~~~~~~pGd-~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~-~~~id~e~l~~ 212 (249)
+ +++++|++|+|++++|..++.+++.+|| +|++++|+|..|...++..|++++.++.++ ++++|++++++
T Consensus 80 ~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~ 159 (374)
T PRK02610 80 NESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQS 159 (374)
T ss_pred CccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHH
Confidence 6 7889999999999999988888888886 899999999999999999999999999754 58999999999
Q ss_pred hhcc---CCceEEEEcCCCCccccCCChHHHH
Q 025730 213 AVER---EKPKCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 213 ~i~~---~~~k~i~l~~PnNPTG~~~~~~e~i 241 (249)
++++ .++|+|++||||||||.+++.+++.
T Consensus 160 ~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~ 191 (374)
T PRK02610 160 AIEQTQNPPVRVVFVVHPNSPTGNPLTAAELE 191 (374)
T ss_pred HHHhhcCCCceEEEEeCCCCCCCCCCCHHHHH
Confidence 9874 5899999999999999999888653
No 22
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.8e-24 Score=198.92 Aligned_cols=156 Identities=21% Similarity=0.376 Sum_probs=135.3
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCCcChHHHHHHHHHHc----C---CCCC-CEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDS----G---LESD-HILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~~g~~~lr~~la~~~----~---~~~~-~I~vt~Ga~~~l~~ 161 (249)
++.++|+|+.|++++.+++.+.+++.+ +. ....||+.|..+||+++++++ | ++++ +|++|+|++++|.+
T Consensus 42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~ 121 (410)
T PRK06290 42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM 121 (410)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence 355789999999999999988888765 32 235688788999999999996 4 5576 79999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
++++++++||.|++++|+|..|...++..|++++.++.++ ++.+|++++++.+. .++|+|++||||||||.+++.++
T Consensus 122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~v~s~e~ 200 (410)
T PRK06290 122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK-EKAKLLYLNYPNNPTGAVATKEF 200 (410)
T ss_pred HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-ccceEEEEECCCCCCCcCCCHHH
Confidence 9999999999999999999999999999999999999753 47789999999887 68999999999999999998875
Q ss_pred H--HHHHhhhhC
Q 025730 240 W--IWGISSEHN 249 (249)
Q Consensus 240 ~--i~~i~~~~~ 249 (249)
+ +.++|++||
T Consensus 201 l~~l~~la~~~~ 212 (410)
T PRK06290 201 YEEVVDFAKENN 212 (410)
T ss_pred HHHHHHHHHHcC
Confidence 4 556788765
No 23
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3e-24 Score=193.48 Aligned_cols=170 Identities=32% Similarity=0.565 Sum_probs=143.0
Q ss_pred HHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCCcChHHHHHHHHHHc
Q 025730 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDS 142 (249)
Q Consensus 66 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~~g~~~lr~~la~~~ 142 (249)
+.+..+..+.+|... .....++|+.|++++++|+.+.+++.+ +. ...+|++.+..+||+++|+++
T Consensus 5 ~~~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~ 72 (351)
T PRK14807 5 LVREEIKGFKNYEVH------------SIPYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYC 72 (351)
T ss_pred HHHHHHhhcCCCCCC------------CCCceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHh
Confidence 445666666666211 113458999999999999999999876 32 336788777889999999999
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEE
Q 025730 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (249)
Q Consensus 143 ~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i 222 (249)
++++++|++|+|++++|.+++.+++++||+|++++|+|..|...++..|++++.++.++++++|++++++++++.++|+|
T Consensus 73 ~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v 152 (351)
T PRK14807 73 SVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLV 152 (351)
T ss_pred CCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999877789999999999975589999
Q ss_pred EEcCCCCccccCCChHHHHHHHhhhh
Q 025730 223 FLTSPNNPDGRFSWTSSWIWGISSEH 248 (249)
Q Consensus 223 ~l~~PnNPTG~~~~~~e~i~~i~~~~ 248 (249)
+++|||||||.+++.+++ .++++++
T Consensus 153 ~l~~p~NPtG~~~~~~~l-~~l~~~~ 177 (351)
T PRK14807 153 FLCNPNNPTGSVIEREDI-IKIIEKS 177 (351)
T ss_pred EEeCCCCCCCCCCCHHHH-HHHHHhC
Confidence 999999999999876554 4445443
No 24
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.7e-24 Score=194.57 Aligned_cols=143 Identities=29% Similarity=0.491 Sum_probs=127.7
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCe
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~ 172 (249)
+++|+|+.|++++++++.+.+++.+ +. ....||+.+..+||+++|+++++++++|++|+|++++|.+++++++++||+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~ 103 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRP 103 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 5689999999999999999999876 32 246788878899999999999999999999999999999999999999999
Q ss_pred EEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHH
Q 025730 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 173 Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~ 242 (249)
|++++|+|..|...++..|++++.++.++++++|++++++ ++++|+++|||||||.+++.+++.+
T Consensus 104 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~ 168 (353)
T PRK05387 104 LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIER 168 (353)
T ss_pred EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 9999999999999999999999999987788999999864 3578999999999999987665543
No 25
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=1.6e-24 Score=197.51 Aligned_cols=163 Identities=18% Similarity=0.217 Sum_probs=137.8
Q ss_pred HHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCC-CCcChHHHHHHHHHHcC------CCCCCEEEeCCHH
Q 025730 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGAD 156 (249)
Q Consensus 86 ~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~la~~~~------~~~~~I~vt~Ga~ 156 (249)
..+......+++++|+.|++++++|+.+.+++.+ +. ....| +..|.++||++++++++ +++++|++|+|++
T Consensus 23 ~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 102 (387)
T PRK08960 23 RANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGS 102 (387)
T ss_pred HHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcH
Confidence 3333333456789999999999999999999876 33 22567 56789999999999973 6889999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 157 ~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
++|.+++..++++||+|++++|+|..+...+...|.+++.++.+. ++.+|++++++.++ .++++++++|||||||.+
T Consensus 103 ~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~ 181 (387)
T PRK08960 103 GALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN-ADTVGALVASPANPTGTL 181 (387)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC-ccceEEEEECCCCCCCcC
Confidence 999999999999999999999999999999999999999998643 46899999999887 678999999999999999
Q ss_pred CChHHH--HHHHhhhhC
Q 025730 235 SWTSSW--IWGISSEHN 249 (249)
Q Consensus 235 ~~~~e~--i~~i~~~~~ 249 (249)
++.+++ +.++|++||
T Consensus 182 ~~~~~~~~l~~~~~~~~ 198 (387)
T PRK08960 182 LSRDELAALSQALRARG 198 (387)
T ss_pred cCHHHHHHHHHHHHHcC
Confidence 988755 556788775
No 26
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=2.5e-24 Score=194.66 Aligned_cols=176 Identities=31% Similarity=0.567 Sum_probs=149.1
Q ss_pred HHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCC
Q 025730 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL 144 (249)
Q Consensus 66 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~ 144 (249)
+.++++.++.+|.++..+...+++. +..++++|+.|++++++++.+.+++.+ .....+||+....+||+++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~ 82 (367)
T PRK02731 5 LPNPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDGSGFELKAALAEKFGV 82 (367)
T ss_pred cchhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHhCc
Confidence 3456677777786666666666655 456799999999999999999888876 3334678877678999999999999
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEE
Q 025730 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (249)
Q Consensus 145 ~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l 224 (249)
++++|++|+|+++++.+++.+++++||+|++++|+|..|...++..|++++.++. +++.+|++.++++++ .++++|++
T Consensus 83 ~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~l 160 (367)
T PRK02731 83 DPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT-PRTRLVFI 160 (367)
T ss_pred CHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhC-CCCcEEEE
Confidence 9999999999999999999999999999999999999999888899999999998 568899999999997 68999999
Q ss_pred cCCCCccccCCChHHHHHHHhh
Q 025730 225 TSPNNPDGRFSWTSSWIWGISS 246 (249)
Q Consensus 225 ~~PnNPTG~~~~~~e~i~~i~~ 246 (249)
+|||||||.+++.+++ .++++
T Consensus 161 ~~p~nptG~~~~~~~l-~~l~~ 181 (367)
T PRK02731 161 ANPNNPTGTYLPAEEV-ERFLA 181 (367)
T ss_pred eCCCCCCCcCCCHHHH-HHHHH
Confidence 9999999999876654 34443
No 27
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.93 E-value=2.5e-24 Score=195.94 Aligned_cols=179 Identities=21% Similarity=0.367 Sum_probs=143.1
Q ss_pred HHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC-cChHHHHHHHHHHc--
Q 025730 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS-- 142 (249)
Q Consensus 69 ~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~la~~~-- 142 (249)
+++..+.++.. ..+...+.+.+....++++|+.|++++++++.+.+++.+ +. ....|++ .|.++||+++++++
T Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 84 (385)
T PRK09276 6 DRIKNLPPYLF-AEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKR 84 (385)
T ss_pred hHhhhCCccHH-HHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 34444444421 223334444545566789999999999999999888876 32 2367875 47899999999997
Q ss_pred --C--CCCC-CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhc
Q 025730 143 --G--LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVE 215 (249)
Q Consensus 143 --~--~~~~-~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~ 215 (249)
| ++++ +|++|+|++++|.+++..++++||+|++++|+|..|...++..|++++.++.+. ++.+|++++++.+.
T Consensus 85 ~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~ 164 (385)
T PRK09276 85 RFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA 164 (385)
T ss_pred HhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence 4 4566 599999999999999999999999999999999999999999999999999643 47789999999887
Q ss_pred cCCceEEEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 216 REKPKCIFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 216 ~~~~k~i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
.++++|+++|||||||.+++.+++ +.++|++||
T Consensus 165 -~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~ 199 (385)
T PRK09276 165 -KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYD 199 (385)
T ss_pred -ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 689999999999999999988744 566777764
No 28
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.93 E-value=1.9e-24 Score=197.46 Aligned_cols=155 Identities=23% Similarity=0.350 Sum_probs=134.4
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCC-cChHHHHHHHHHHc--------CCCCC-CEEEeCCHHHHHHHH
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKDS--------GLESD-HILVGCGADELIDLI 162 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~-~g~~~lr~~la~~~--------~~~~~-~I~vt~Ga~~~l~~~ 162 (249)
+.+.|+|+.|++++++|+.+.+++.. +.....|++ .|.++||+++|+++ +++++ +|++|+|++++|.++
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~ 106 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAF 106 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHH
Confidence 46789999999999999999999886 444477965 57899999999998 36675 799999999999999
Q ss_pred HHHhcCCCCe--EEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 163 MRCVLDPGDK--IVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 163 ~~~~~~pGd~--Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
++++++|||. |++++|+|..|...++..|++++.++.+ +++.+|++++++++. .++|+|+++|||||||.+++.+
T Consensus 107 ~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPtG~~~s~~ 185 (393)
T TIGR03538 107 AQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW-RRCQLLFVCSPGNPTGAVLSLD 185 (393)
T ss_pred HHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh-hcceEEEEeCCCCCcCcccCHH
Confidence 9999999986 9999999999999999999999999964 347889999999887 5899999999999999999887
Q ss_pred HH--HHHHhhhhC
Q 025730 239 SW--IWGISSEHN 249 (249)
Q Consensus 239 e~--i~~i~~~~~ 249 (249)
++ +..+|++||
T Consensus 186 ~~~~l~~~a~~~~ 198 (393)
T TIGR03538 186 TLKKLIELADQYG 198 (393)
T ss_pred HHHHHHHHHHHCC
Confidence 54 556777764
No 29
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=2.8e-24 Score=197.60 Aligned_cols=156 Identities=14% Similarity=0.210 Sum_probs=136.3
Q ss_pred CCCCeeeccCCCCC----CCCCHHHHHHHHh-ccC--CCCC-CCcChHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 025730 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (249)
Q Consensus 93 ~~~~~I~L~~~~~~----~~~p~~v~~al~~-~~~--~~~Y-p~~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~ 158 (249)
..+++|+|+.|+++ +++|+.+.+++.+ +.. ..+| |..|..+||+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a 109 (409)
T PLN00143 30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA 109 (409)
T ss_pred CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence 34679999999998 8999999998876 332 2569 6678999999999997 3688999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
|.+++++++++||.|++++|+|..|...++..|++++.++.. +++.+|+++++++++ .+++++++||||||||.+++
T Consensus 110 l~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 110 AEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD-ENTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred HHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc-cCCEEEEEECCCCCCCCccC
Confidence 999999999999999999999999999999999999999863 467899999999887 67899999999999999998
Q ss_pred hHHH--HHHHhhhhC
Q 025730 237 TSSW--IWGISSEHN 249 (249)
Q Consensus 237 ~~e~--i~~i~~~~~ 249 (249)
.+++ +.++|++||
T Consensus 189 ~~~~~~l~~~a~~~~ 203 (409)
T PLN00143 189 YEHLNKIAETARKLG 203 (409)
T ss_pred HHHHHHHHHHHHHcC
Confidence 8765 556777764
No 30
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.3e-24 Score=194.35 Aligned_cols=160 Identities=29% Similarity=0.483 Sum_probs=132.6
Q ss_pred HHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHHcCCC
Q 025730 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145 (249)
Q Consensus 66 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~~~~~ 145 (249)
+.+..+..+.+|.+... ....+.|+|+.|+|++++++.+ ......+||+.+..+||+++|+++|++
T Consensus 11 ~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~ne~~~~~~~~~-----~~~~~~~Yp~~~~~~Lr~aia~~~~~~ 76 (354)
T PRK04635 11 LARPELLALTPYQSARR---------IGGRGDIWINANESPFNNEYKL-----DLARLNRYPECQPPELINAYSAYAGVA 76 (354)
T ss_pred HhhHHhhcCCCCCCCCC---------cCCCCcEEeeCCCCCCCCChhh-----hhHHhccCCCCCHHHHHHHHHHHhCcC
Confidence 44556666666643211 1124569999999999988653 112237899888899999999999999
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEE
Q 025730 146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (249)
Q Consensus 146 ~~~I~vt~Ga~~~l~~~~~~~~~pG-d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l 224 (249)
+++|++|+|++++|.+++++++++| |+|++++|+|..|...++..|++++.+|.++++.+|++.+++ + .++|+|+|
T Consensus 77 ~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~--~~~~li~i 153 (354)
T PRK04635 77 PEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L--DGAKLVFI 153 (354)
T ss_pred HHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c--cCCCEEEE
Confidence 9999999999999999999999999 999999999999999999999999999987778999999873 3 47999999
Q ss_pred cCCCCccccCCChHHHHH
Q 025730 225 TSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 225 ~~PnNPTG~~~~~~e~i~ 242 (249)
||||||||.+++.+++.+
T Consensus 154 ~nP~NPTG~~~~~~~l~~ 171 (354)
T PRK04635 154 CNPNNPTGTVIDRADIEQ 171 (354)
T ss_pred eCCCCCCCccCCHHHHHH
Confidence 999999999987765543
No 31
>PLN02187 rooty/superroot1
Probab=99.92 E-value=5.4e-24 Score=198.55 Aligned_cols=156 Identities=20% Similarity=0.323 Sum_probs=134.6
Q ss_pred CCCCeeeccCCCCC----CCCCHHHHHHHHh-cc--CCCCC-CCcChHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 025730 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (249)
Q Consensus 93 ~~~~~I~L~~~~~~----~~~p~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~ 158 (249)
+..++|+|+.|++. +.+++++.+++.+ +. ....| |..|..+||+++|+++ ++++++|++|+|++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a 143 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG 143 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence 45789999999987 5567788887765 32 23578 6678999999999997 3689999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
|.++++++++|||+|++++|+|..|...++..|++++.++. ++++++|+++++++++ .+++++++||||||||.+++
T Consensus 144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~-~~~~~v~i~nP~NPTG~v~s 222 (462)
T PLN02187 144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD-ENTVAMVVINPNNPCGNVYS 222 (462)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC-CCcEEEEEeCCCCCCCCccC
Confidence 99999999999999999999999999999999999999985 3568999999999987 68999999999999999998
Q ss_pred hHHH--HHHHhhhhC
Q 025730 237 TSSW--IWGISSEHN 249 (249)
Q Consensus 237 ~~e~--i~~i~~~~~ 249 (249)
.+++ +..+|++||
T Consensus 223 ~e~l~~i~~~a~~~~ 237 (462)
T PLN02187 223 HDHLKKVAETARKLG 237 (462)
T ss_pred HHHHHHHHHHHHHCC
Confidence 8754 566777764
No 32
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.92 E-value=2.1e-24 Score=202.29 Aligned_cols=182 Identities=19% Similarity=0.236 Sum_probs=143.2
Q ss_pred HHHHhhccCCCCCCCcHHHHHHHhCC---------CCCCeeeccCCCCC----------------CCC------------
Q 025730 67 IRSHLRKLKPYQPILPFEVLSIQLGR---------KPEDIVKIDANENP----------------YGP------------ 109 (249)
Q Consensus 67 ~~~~~~~l~~~~~~~~~~~~~~~~g~---------~~~~~I~L~~~~~~----------------~~~------------ 109 (249)
+++++..+.+. ....+...+.+... +..++|+|+.|+|. +.+
T Consensus 10 ~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~ 88 (481)
T PTZ00377 10 INPRVVAAEYA-VRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL 88 (481)
T ss_pred cCHHHhhhhhh-cCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence 45556555554 33445555544422 45789999999995 666
Q ss_pred -CHHHHHHHHh----cc-CCCCCCC-cChHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHHHHHhc-CCCCeEEE
Q 025730 110 -PPEVREALGQ----LK-FPYIYPD-PESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVD 175 (249)
Q Consensus 110 -p~~v~~al~~----~~-~~~~Yp~-~g~~~lr~~la~~~~------~~~~~I~vt~Ga~~~l~~~~~~~~-~pGd~Vlv 175 (249)
|..+.+++.+ .. ....|+. .|..+||++++++++ +++++|++|+|++++|.+++++++ ++||.|++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv 168 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI 168 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence 3366666543 11 2256854 589999999999973 678999999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhcc-----CCceEEEEcCCCCccccCCChHHH--HHHHhh
Q 025730 176 CPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGRFSWTSSW--IWGISS 246 (249)
Q Consensus 176 ~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~-----~~~k~i~l~~PnNPTG~~~~~~e~--i~~i~~ 246 (249)
++|+|..|...++..|++++.++.+ ++|++|+++++++++. .++|+|+++|||||||.+++.+++ +..+|+
T Consensus 169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~ 248 (481)
T PTZ00377 169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY 248 (481)
T ss_pred CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999964 4578999999999863 178999999999999999988754 667888
Q ss_pred hhC
Q 025730 247 EHN 249 (249)
Q Consensus 247 ~~~ 249 (249)
+||
T Consensus 249 ~~~ 251 (481)
T PTZ00377 249 EKG 251 (481)
T ss_pred HCC
Confidence 775
No 33
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=6.1e-24 Score=191.77 Aligned_cols=167 Identities=28% Similarity=0.438 Sum_probs=141.1
Q ss_pred CCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHH
Q 025730 79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157 (249)
Q Consensus 79 ~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~ 157 (249)
++..+..++++.|....++++|+.|+|++++|+.+.+++.+ +....+||+.+..+||+++++++++++++|++|+|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~ 82 (354)
T PRK06358 3 HGGNINEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVEYPDPDYLELRKRIASFEQLDLENVILGNGATE 82 (354)
T ss_pred CCccHHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHH
Confidence 34456677788887666789999999999999999999886 44457799888889999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccCC
Q 025730 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFS 235 (249)
Q Consensus 158 ~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~ 235 (249)
+|.++++++ .+ +.|++++|+|..|...++..|++++.++.+. ++.+| +++.+.+. .++++|+++|||||||.++
T Consensus 83 ~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-~~~~~v~~~~P~NPtG~~~ 158 (354)
T PRK06358 83 LIFNIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-EEIDLVFLCNPNNPTGQLI 158 (354)
T ss_pred HHHHHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-cCCCEEEEeCCCCCCCCcc
Confidence 999999986 44 6899999999999999999999999999643 46788 66666665 5799999999999999999
Q ss_pred ChHHH--HHHHhhhhC
Q 025730 236 WTSSW--IWGISSEHN 249 (249)
Q Consensus 236 ~~~e~--i~~i~~~~~ 249 (249)
+.+++ +..+|++||
T Consensus 159 ~~~~~~~l~~~a~~~~ 174 (354)
T PRK06358 159 SKEEMKKILDKCEKRN 174 (354)
T ss_pred CHHHHHHHHHHHHhcC
Confidence 88755 556777764
No 34
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=7.1e-24 Score=190.16 Aligned_cols=163 Identities=37% Similarity=0.637 Sum_probs=136.3
Q ss_pred HHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCCcChHHHHHHHHHHcC
Q 025730 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSG 143 (249)
Q Consensus 67 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~~g~~~lr~~la~~~~ 143 (249)
+|+.+..+++|..+ ...++|+|+.|++++++++.+.+++.+ +. ...+||+.|..+||++++++++
T Consensus 2 ~~~~~~~~~~~~~~------------~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~ 69 (337)
T PRK03967 2 IRELVKSFKPYRVV------------EGNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYG 69 (337)
T ss_pred chhhhhhcCCCCCC------------CCCceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhC
Confidence 35556666666221 123679999999999999999888875 32 2467988889999999999999
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEE
Q 025730 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (249)
Q Consensus 144 ~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~ 223 (249)
+++++|++|+|++++|.+++..+ +||+|+++.|+|..|...++..|++++.++.++++++|++.+++.+ .++++++
T Consensus 70 ~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~ 145 (337)
T PRK03967 70 LDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA--KNASAVF 145 (337)
T ss_pred cCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc--cCCCEEE
Confidence 99999999999999999998865 7999999999999999988999999999998777899999998875 4689999
Q ss_pred EcCCCCccccCCChHHHHHHHhh
Q 025730 224 LTSPNNPDGRFSWTSSWIWGISS 246 (249)
Q Consensus 224 l~~PnNPTG~~~~~~e~i~~i~~ 246 (249)
++|||||||.+++.+++. .+++
T Consensus 146 ~~~P~NPtG~~~~~~~l~-~i~~ 167 (337)
T PRK03967 146 ICSPNNPTGNLQPEEEIL-KVLE 167 (337)
T ss_pred EeCCCCCCCCCCCHHHHH-HHHh
Confidence 999999999998776554 4443
No 35
>PRK08068 transaminase; Reviewed
Probab=99.92 E-value=6e-24 Score=193.89 Aligned_cols=155 Identities=24% Similarity=0.382 Sum_probs=133.9
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCC-CCcChHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHH
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLI 162 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~la~~~----~--~~~~-~I~vt~Ga~~~l~~~ 162 (249)
+.++|+|+.|.+++++++.+.+++.+ +. ...+| |..|..+||+++++++ | ++++ +|++|+|+++++.++
T Consensus 31 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~ 110 (389)
T PRK08068 31 GHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVEL 110 (389)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHH
Confidence 45689999999888888888888765 32 23679 4678999999999997 4 6777 899999999999999
Q ss_pred HHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH
Q 025730 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW 240 (249)
Q Consensus 163 ~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~ 240 (249)
+..++++||+|++++|+|..|...++..|++++.++.++ ++.+|+++++++++ .++++|++||||||||.+++.+++
T Consensus 111 ~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPTG~~~s~~~~ 189 (389)
T PRK08068 111 PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-EKAKLMYLNYPNNPTGAVATKAFF 189 (389)
T ss_pred HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCCcCCHHHH
Confidence 999999999999999999999999999999999999753 57789999999987 689999999999999999998855
Q ss_pred --HHHHhhhhC
Q 025730 241 --IWGISSEHN 249 (249)
Q Consensus 241 --i~~i~~~~~ 249 (249)
+.++|++||
T Consensus 190 ~~l~~la~~~~ 200 (389)
T PRK08068 190 EETVAFAKKHN 200 (389)
T ss_pred HHHHHHHHHcC
Confidence 556788764
No 36
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.92 E-value=3e-24 Score=189.36 Aligned_cols=154 Identities=26% Similarity=0.418 Sum_probs=138.2
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCC-CCCCCcChHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~-~~Yp~~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
+++++|.+.+++|+.||.+++|+++ ++++ ++|| .+.+++.+++++|+ .++++.|++++|...++.++++.+
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~ 103 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRAL 103 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHh
Confidence 7899999999999999999999987 6665 7888 45667888888875 478899999999999999999999
Q ss_pred cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC---CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 167 ~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~---~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
.+|||.|++..|.|+++....+..|.+++..|+ +..+.+|+++|++++.+.++|+.++||||||||.+++.+++ +
T Consensus 104 T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i 183 (388)
T COG1168 104 TKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKI 183 (388)
T ss_pred CcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHH
Confidence 999999999999999999999999999999994 34467799999999987778999999999999999888866 7
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.+||++||
T Consensus 184 ~elc~kh~ 191 (388)
T COG1168 184 AELCLRHG 191 (388)
T ss_pred HHHHHHcC
Confidence 88999997
No 37
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.3e-23 Score=189.88 Aligned_cols=154 Identities=25% Similarity=0.349 Sum_probs=132.3
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-c-cCCCCCCC-cChHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~-~~~~~Yp~-~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
+++|+|+.|++++++++.+.+++.. . .....|++ .|..+||+++++++ ++++++|++|+|+++++.+++.+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~ 108 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQS 108 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHH
Confidence 4679999999999988888775543 2 23467865 47899999999997 46889999999999999999999
Q ss_pred hcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 166 ~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
++++||+|++++|+|..|...++..|++++.++. ++++.+|+++++++++ .++|+|++++||||||.+++.+++ +
T Consensus 109 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~l 187 (384)
T PRK06348 109 ILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEI 187 (384)
T ss_pred hcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-cCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence 9999999999999999999999999999999985 3457799999999987 689999999999999999987755 5
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|+++|
T Consensus 188 ~~~a~~~~ 195 (384)
T PRK06348 188 AKIAIEYD 195 (384)
T ss_pred HHHHHHCC
Confidence 66787764
No 38
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.3e-23 Score=192.04 Aligned_cols=162 Identities=19% Similarity=0.289 Sum_probs=132.6
Q ss_pred HHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC-cChHHHHHHHHHHc----C--CCCC-CEEEeCCH
Q 025730 87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGA 155 (249)
Q Consensus 87 ~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~la~~~----~--~~~~-~I~vt~Ga 155 (249)
+......+.++|+|+.+.++.++|+.+.+++.. +. ....|++ .|.++||+++++++ + ++++ +|++|+|+
T Consensus 27 ~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~ 106 (394)
T PRK05942 27 KARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGS 106 (394)
T ss_pred HHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccCh
Confidence 333333455689999998877767767766543 32 2367865 47899999999997 4 4677 58999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 156 ~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
+++|.+++.+++++||+|++++|+|..|...+...|++++.++.+ ++|.+|++++++.++ +++|+|+++|||||||.
T Consensus 107 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~P~NPtG~ 185 (394)
T PRK05942 107 KEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-QQAKILYFNYPSNPTTA 185 (394)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-ccceEEEEcCCCCCCCC
Confidence 999999999999999999999999999988888899999999864 357799999999987 68999999999999999
Q ss_pred CCChHHH--HHHHhhhhC
Q 025730 234 FSWTSSW--IWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~--i~~i~~~~~ 249 (249)
+++.+++ +.++|++||
T Consensus 186 ~~s~~~~~~i~~~a~~~~ 203 (394)
T PRK05942 186 TAPREFFEEIVAFARKYE 203 (394)
T ss_pred cCCHHHHHHHHHHHHHcC
Confidence 9987754 566788764
No 39
>PLN00175 aminotransferase family protein; Provisional
Probab=99.91 E-value=4.1e-23 Score=190.12 Aligned_cols=154 Identities=22% Similarity=0.405 Sum_probs=134.2
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccC-CCCCCC-cChHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~-~~~Yp~-~g~~~lr~~la~~~----~--~~~~-~I~vt~Ga~~~l~~~~~ 164 (249)
.++|+|+.|.+++++++.+.+++.+ +.. ...|++ .|.++||+++++++ + ++++ +|++|+|+++++.+++.
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~ 133 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATIL 133 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHH
Confidence 4789999999999999988888875 332 367964 58999999999987 3 5676 79999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
++++|||+|++++|+|..|...++..|++++.++.+ +++.+|++++++++. .++|+|+++|||||||.+++.+++ +
T Consensus 134 ~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-~~~k~i~i~~p~NPtG~~~s~~~l~~l 212 (413)
T PLN00175 134 GLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-SKTRAILINTPHNPTGKMFTREELELI 212 (413)
T ss_pred HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC-cCceEEEecCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999964 458999999999997 689999999999999999987754 6
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
..+|++||
T Consensus 213 ~~~a~~~~ 220 (413)
T PLN00175 213 ASLCKEND 220 (413)
T ss_pred HHHHHHcC
Confidence 67788765
No 40
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.91 E-value=2e-23 Score=189.88 Aligned_cols=156 Identities=23% Similarity=0.386 Sum_probs=133.3
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC-cChHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----GL--ESD-HILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~la~~~----~~--~~~-~I~vt~Ga~~~l~~ 161 (249)
.++++++|+.|++++++++.+.+++.+ +. ...+|++ .|.++||+++++++ |+ +++ +|++|+|++++|.+
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~ 106 (383)
T TIGR03540 27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAH 106 (383)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHH
Confidence 346789999999999999988888775 22 2367976 47899999999986 33 555 69999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
+++.++++||+|++++|+|..|...++..|++++.++.+. ++.+|++++++++. .++|+|++||||||||.+++.++
T Consensus 107 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~i~~P~NPtG~~~~~~~ 185 (383)
T TIGR03540 107 IPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-KKAKLMFINYPNNPTGAVAPLKF 185 (383)
T ss_pred HHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-ccceEEEEeCCCCCcCccCCHHH
Confidence 9999999999999999999999999999999999999643 46789999999887 68999999999999999998874
Q ss_pred H--HHHHhhhhC
Q 025730 240 W--IWGISSEHN 249 (249)
Q Consensus 240 ~--i~~i~~~~~ 249 (249)
+ +.++|++||
T Consensus 186 ~~~i~~~a~~~~ 197 (383)
T TIGR03540 186 FKELVEFAKEYN 197 (383)
T ss_pred HHHHHHHHHHcC
Confidence 4 667888775
No 41
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=2.6e-23 Score=190.72 Aligned_cols=156 Identities=22% Similarity=0.392 Sum_probs=132.9
Q ss_pred CCCCeeeccCCCC---CCCCCHHHHHHHHh-ccCCCCCCCc-ChHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~---~~~~p~~v~~al~~-~~~~~~Yp~~-g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~l~~ 161 (249)
.+.++|+|+.|.+ ++++++.+.+++.+ ......|++. |.++||+++++++ ++++++|++|+|+++++.+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~ 110 (404)
T PRK09265 31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVM 110 (404)
T ss_pred cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHH
Confidence 4568899999866 56688888888765 3344679654 7899999999998 6889999999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
++++++++||+|++++|+|..|...++..|++++.++.+ +++.+|+++++++++ .++++|+++|||||||.+++.++
T Consensus 111 ~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~~~~~ 189 (404)
T PRK09265 111 AMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYSKEL 189 (404)
T ss_pred HHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCcCCCHHH
Confidence 999999999999999999999999999999999988754 357799999999987 68999999999999999988664
Q ss_pred H--HHHHhhhhC
Q 025730 240 W--IWGISSEHN 249 (249)
Q Consensus 240 ~--i~~i~~~~~ 249 (249)
+ +..+|+++|
T Consensus 190 ~~~i~~~a~~~~ 201 (404)
T PRK09265 190 LEEIVEIARQHN 201 (404)
T ss_pred HHHHHHHHHHCC
Confidence 4 566777765
No 42
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.6e-23 Score=190.10 Aligned_cols=147 Identities=32% Similarity=0.577 Sum_probs=129.7
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeE
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~V 173 (249)
...++|+.|++++++++.+.+++.+ .....+|++++..+||+++|+++++++++|++|+|++++|.+++..++++||.|
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v 111 (369)
T PRK08153 32 PFRARIGANESGFGPSPSVIAAMREAAAEIWKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPV 111 (369)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEE
Confidence 3457999999999999999999875 333367887778999999999999999999999999999999999999999999
Q ss_pred EEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHH
Q 025730 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 174 lv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~ 242 (249)
++++|+|+.|...++..|++++.+|.+.+ .+|++++++.+.+.++++|++||||||||.+++.+++.+
T Consensus 112 lv~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~ 179 (369)
T PRK08153 112 VTSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVA 179 (369)
T ss_pred EECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999888899999999997544 689999988775568999999999999999988776543
No 43
>PRK07337 aminotransferase; Validated
Probab=99.91 E-value=2.2e-23 Score=190.01 Aligned_cols=159 Identities=25% Similarity=0.332 Sum_probs=136.2
Q ss_pred hCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCCC-cChHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHH
Q 025730 90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELID 160 (249)
Q Consensus 90 ~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~la~~~----~--~~~~~I~vt~Ga~~~l~ 160 (249)
.....+++++|+.|++++++++.+.+++.+ +. ....|++ .|.++||+++++++ | +++++|++|+|++++|.
T Consensus 25 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~ 104 (388)
T PRK07337 25 LERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL 104 (388)
T ss_pred HHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH
Confidence 333456789999999999888888888876 32 3367865 47899999999996 3 57899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 161 ~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
+++..++++||+|++++|+|..+...++..|++++.++.+ +++.+|++++++.++ +++++|+++|||||||.+++.+
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~ 183 (388)
T PRK07337 105 LACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-ERTRGVLLASPSNPTGTSIAPD 183 (388)
T ss_pred HHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-ccceEEEEECCCCCCCcCcCHH
Confidence 9999999999999999999999999889999999999974 357899999999997 6899999999999999999877
Q ss_pred HH--HHHHhhhhC
Q 025730 239 SW--IWGISSEHN 249 (249)
Q Consensus 239 e~--i~~i~~~~~ 249 (249)
++ +.++|+++|
T Consensus 184 ~~~~i~~~a~~~~ 196 (388)
T PRK07337 184 ELRRIVEAVRARG 196 (388)
T ss_pred HHHHHHHHHHHCC
Confidence 54 566777764
No 44
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.91 E-value=1.9e-23 Score=192.11 Aligned_cols=156 Identities=22% Similarity=0.334 Sum_probs=135.0
Q ss_pred CCCCeeeccCCCCC----CCCCHHHHHHHHh-cc--CCCCCCCc-ChHHHHHHHHHHcC------------CCCCCEEEe
Q 025730 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDSG------------LESDHILVG 152 (249)
Q Consensus 93 ~~~~~I~L~~~~~~----~~~p~~v~~al~~-~~--~~~~Yp~~-g~~~lr~~la~~~~------------~~~~~I~vt 152 (249)
.++++|+|+.|.++ +.+++.+.+++.+ +. ...+|++. |..+||++++++++ +++++|++|
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it 110 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC 110 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence 35678999999986 5678889988876 33 23679765 79999999999985 678999999
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCc
Q 025730 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (249)
Q Consensus 153 ~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNP 230 (249)
+|++++|.+++++++++||+|++++|+|..|...++..|++++.++.+ +++++|+++++++++ .++++|+++|||||
T Consensus 111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NP 189 (412)
T PTZ00433 111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD-DRTKALIMTNPSNP 189 (412)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc-cCceEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999964 457999999999887 58999999999999
Q ss_pred cccCCChHHH--HHHHhhhhC
Q 025730 231 DGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 231 TG~~~~~~e~--i~~i~~~~~ 249 (249)
||.+++.+++ +..+|++||
T Consensus 190 tG~~~s~~~~~~l~~~a~~~~ 210 (412)
T PTZ00433 190 CGSNFSRKHVEDIIRLCEELR 210 (412)
T ss_pred CCcccCHHHHHHHHHHHHHcC
Confidence 9999987755 566777764
No 45
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.91 E-value=3e-23 Score=186.81 Aligned_cols=152 Identities=25% Similarity=0.404 Sum_probs=132.3
Q ss_pred eeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCc-ChHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHHHhc
Q 025730 97 IVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRCVL 167 (249)
Q Consensus 97 ~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~-g~~~lr~~la~~~----~--~~~~-~I~vt~Ga~~~l~~~~~~~~ 167 (249)
+++|+.+.+++++++.+.+++.+ ......|+++ |..+||+++++++ | ++++ +|++|+|+++++.+++..++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~ 81 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI 81 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc
Confidence 58999999999989999999886 3344679764 7899999999996 5 5676 89999999999999999999
Q ss_pred CCC---CeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--
Q 025730 168 DPG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW-- 240 (249)
Q Consensus 168 ~pG---d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~-- 240 (249)
++| |+|+++.|+|..|...++..|++++.++.+ +++.+|++++++++. .++|++++++||||||.+++.+++
T Consensus 82 ~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 82 DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-EETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-hccEEEEEeCCCCCcCcccCHHHHHH
Confidence 987 699999999999999999999999999974 357789999999987 589999999999999999887644
Q ss_pred HHHHhhhhC
Q 025730 241 IWGISSEHN 249 (249)
Q Consensus 241 i~~i~~~~~ 249 (249)
+.++|++||
T Consensus 161 l~~~a~~~~ 169 (350)
T TIGR03537 161 TIAMCREHG 169 (350)
T ss_pred HHHHHHHcC
Confidence 667788765
No 46
>PRK03321 putative aminotransferase; Provisional
Probab=99.91 E-value=3e-23 Score=186.66 Aligned_cols=151 Identities=31% Similarity=0.562 Sum_probs=133.8
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeE
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~V 173 (249)
.++|+|+.|++++++++.+.+++.+ ......||+.|..+||+++|+++++++++|++|+|+++++..++..++++||+|
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~V 101 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEV 101 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEE
Confidence 4679999999999999999999876 334467888899999999999999999999999999999999999999999999
Q ss_pred EEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhh
Q 025730 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSE 247 (249)
Q Consensus 174 lv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~ 247 (249)
+++.|+|..|...++..|++++.++.+.++++|++.++++++ .++++|+++|||||||.+++.+++ .+++++
T Consensus 102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~l-~~l~~~ 173 (352)
T PRK03321 102 IFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAEL-ARFLDA 173 (352)
T ss_pred EeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-cCCCEEEEeCCCCCcCCCcCHHHH-HHHHHh
Confidence 999999999999999999999999987668899999999997 689999999999999999876544 444443
No 47
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=5.3e-23 Score=190.35 Aligned_cols=155 Identities=21% Similarity=0.372 Sum_probs=133.8
Q ss_pred CCCeeeccCCCCC----CCCCHHHHHHHHh-ccC--CCCCCC-cChHHHHHHHHHHcC------CCCCCEEEeCCHHHHH
Q 025730 94 PEDIVKIDANENP----YGPPPEVREALGQ-LKF--PYIYPD-PESRRLRAALAKDSG------LESDHILVGCGADELI 159 (249)
Q Consensus 94 ~~~~I~L~~~~~~----~~~p~~v~~al~~-~~~--~~~Yp~-~g~~~lr~~la~~~~------~~~~~I~vt~Ga~~~l 159 (249)
+.++|+|+.|++. +++++.+.+++.+ +.. ...|+. .|..+||++++++++ +++++|++|+|++++|
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 4579999999985 7788889888876 332 357864 589999999999973 5789999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCCh
Q 025730 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~ 237 (249)
.+++..+++|||+|++++|+|..|...+...|++++.++. +++|.+|++.+++.++ .++++++++|||||||.+++.
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~P~NPtG~v~~~ 209 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD-ENTVAMVIINPNNPCGSVYSY 209 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC-cCceEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999884 4568999999999887 689999999999999999987
Q ss_pred HHH--HHHHhhhhC
Q 025730 238 SSW--IWGISSEHN 249 (249)
Q Consensus 238 ~e~--i~~i~~~~~ 249 (249)
+++ +.++|+++|
T Consensus 210 ~~l~~i~~~a~~~~ 223 (430)
T PLN00145 210 EHLAKIAETARKLG 223 (430)
T ss_pred HHHHHHHHHHHHcC
Confidence 754 566788765
No 48
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.91 E-value=3.2e-23 Score=185.87 Aligned_cols=152 Identities=43% Similarity=0.794 Sum_probs=133.8
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCe
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~ 172 (249)
+.++|+|+.|++++++|+.+.+++.+ .....+|+++...+||+++++++++++++|++|+|+++++..++.+++++||+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~ 97 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDA 97 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 35799999999999999999999886 33346788776799999999999998999999999999999999999999999
Q ss_pred EEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhh
Q 025730 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSE 247 (249)
Q Consensus 173 Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~ 247 (249)
|++++|+|..|...++..|++++.++.+.++.+|+++++++++ .++++|++++||||||.+++.++ +.++++.
T Consensus 98 v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~-~~~l~~~ 170 (346)
T TIGR01141 98 VLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSD-IEAVLER 170 (346)
T ss_pred EEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-CCCCEEEEeCCCCCCCCCCCHHH-HHHHHHh
Confidence 9999999999998889999999999987778899999999886 68999999999999999976554 4445544
No 49
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.3e-23 Score=189.48 Aligned_cols=155 Identities=17% Similarity=0.287 Sum_probs=131.4
Q ss_pred CCCeeeccCCCCC-CCCCHHHHHHHHh-ccC--CCCCCC-cChHHHHHHHHHHc----C--CCC-CCEEEeCCHHHHHHH
Q 025730 94 PEDIVKIDANENP-YGPPPEVREALGQ-LKF--PYIYPD-PESRRLRAALAKDS----G--LES-DHILVGCGADELIDL 161 (249)
Q Consensus 94 ~~~~I~L~~~~~~-~~~p~~v~~al~~-~~~--~~~Yp~-~g~~~lr~~la~~~----~--~~~-~~I~vt~Ga~~~l~~ 161 (249)
+.+.|+|+.+++. +++++.+.+++.+ +.. ...|++ .|..+||+++++++ | +++ ++|++|+|++++|.+
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL 117 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence 4578999998866 5677777777765 322 257965 58999999999886 6 466 899999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-----CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-----~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
++.+++++||+|++++|+|..|...++..|++++.++.+ +++++|+++|+++++ .++++|++||||||||.+++
T Consensus 118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s 196 (405)
T PRK06207 118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK-AGVRVFLFSNPNNPAGVVYS 196 (405)
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh-hcCeEEEECCCCCCCCcCCC
Confidence 999999999999999999999999999999999999864 368899999999987 67999999999999999998
Q ss_pred hHHH--HHHHhhhhC
Q 025730 237 TSSW--IWGISSEHN 249 (249)
Q Consensus 237 ~~e~--i~~i~~~~~ 249 (249)
.+++ +.++|++||
T Consensus 197 ~e~l~~l~~~a~~~~ 211 (405)
T PRK06207 197 AEEIAQIAALARRYG 211 (405)
T ss_pred HHHHHHHHHHHHHcC
Confidence 7754 666787764
No 50
>PLN02656 tyrosine transaminase
Probab=99.91 E-value=4.8e-23 Score=189.37 Aligned_cols=156 Identities=19% Similarity=0.305 Sum_probs=135.8
Q ss_pred CCCCeeeccCCCCC----CCCCHHHHHHHHh-ccC--CCCC-CCcChHHHHHHHHHHcC------CCCCCEEEeCCHHHH
Q 025730 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL 158 (249)
Q Consensus 93 ~~~~~I~L~~~~~~----~~~p~~v~~al~~-~~~--~~~Y-p~~g~~~lr~~la~~~~------~~~~~I~vt~Ga~~~ 158 (249)
.+.++|+|+.|++. +++|+.+.+++.+ +.. ...| |..|..+||++++++++ +++++|++|+|++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 45689999999998 8889999998876 332 3679 56789999999999973 678999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
+.+++.+++++||+|++++|+|..|...++..|++++.++.. +++.+|+++++++++ .++++|+++|||||||.+++
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 109 IDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-QNTVALVIINPGNPCGNVYS 187 (409)
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc-cCceEEEEECCCCCCCCCCC
Confidence 999999999999999999999999998888899999999963 457899999999887 67899999999999999998
Q ss_pred hHHH--HHHHhhhhC
Q 025730 237 TSSW--IWGISSEHN 249 (249)
Q Consensus 237 ~~e~--i~~i~~~~~ 249 (249)
.+++ +..+|++||
T Consensus 188 ~~~~~~i~~~a~~~~ 202 (409)
T PLN02656 188 YQHLKKIAETAEKLK 202 (409)
T ss_pred HHHHHHHHHHHHHcC
Confidence 7755 667888764
No 51
>PRK07550 hypothetical protein; Provisional
Probab=99.91 E-value=4.9e-23 Score=187.66 Aligned_cols=157 Identities=18% Similarity=0.300 Sum_probs=135.5
Q ss_pred CCCCCeeeccCCCCCCCCCHHHHHHHHhc-c--CCCCC-CCcChHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHH
Q 025730 92 RKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDL 161 (249)
Q Consensus 92 ~~~~~~I~L~~~~~~~~~p~~v~~al~~~-~--~~~~Y-p~~g~~~lr~~la~~~~------~~~~~I~vt~Ga~~~l~~ 161 (249)
..+.+.|+|+.+++++++++.+.+++... . ....| +..|.++||++++++++ +++++|++|+|+++++.+
T Consensus 26 ~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 105 (386)
T PRK07550 26 GADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWA 105 (386)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 34566899999999998888888888752 2 23578 55689999999999873 678999999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH-
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS- 238 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~- 238 (249)
++.+++++||+|+++.|+|..+...++..|++++.++.+ .++.+|+++++++++ .++++|++++||||||.+++.+
T Consensus 106 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~~~~P~NPtG~~~~~~~ 184 (386)
T PRK07550 106 AMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-PRTRAIALVTPNNPTGVVYPPEL 184 (386)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-ccCcEEEEeCCCCCCCcccCHHH
Confidence 999999999999999999999999999999999999975 356789999999998 6899999999999999999876
Q ss_pred -HHHHHHhhhhC
Q 025730 239 -SWIWGISSEHN 249 (249)
Q Consensus 239 -e~i~~i~~~~~ 249 (249)
+.+.++|++||
T Consensus 185 ~~~i~~~~~~~~ 196 (386)
T PRK07550 185 LHELYDLARRHG 196 (386)
T ss_pred HHHHHHHHHHcC
Confidence 44778888875
No 52
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.1e-23 Score=196.83 Aligned_cols=156 Identities=19% Similarity=0.346 Sum_probs=129.5
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHhc-c-------------CCCCCCCc-ChHHHHHHHHHHcC--------CCCCCE
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHI 149 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~~-~-------------~~~~Yp~~-g~~~lr~~la~~~~--------~~~~~I 149 (249)
.+..+|+|+.+||++.. +.+.+.+... . ...+|++. |.++||+++|++++ +++++|
T Consensus 36 ~p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~I 114 (468)
T PLN02450 36 NPSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKL 114 (468)
T ss_pred CCCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHe
Confidence 34578999999999876 6666665542 1 12458764 78899999999983 688999
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHH-HCCCEEEEecC--CCCCCCCHHHHHHhhcc-----CCceE
Q 025730 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPR--KSDFSLNVELIADAVER-----EKPKC 221 (249)
Q Consensus 150 ~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~-~~G~~v~~v~~--~~~~~id~e~l~~~i~~-----~~~k~ 221 (249)
++|+|++++|.+++.++++|||.|++++|+|..|...+. ..|++++.|+. ++++.+|++++++++++ .++|+
T Consensus 115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~ 194 (468)
T PLN02450 115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKG 194 (468)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeE
Confidence 999999999999999999999999999999999988877 48999999996 46688899999998753 37899
Q ss_pred EEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 222 IFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 222 i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
|++||||||||.+++.+++ +..+|++||
T Consensus 195 v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~ 224 (468)
T PLN02450 195 VLITNPSNPLGTTTTRTELNLLVDFITAKN 224 (468)
T ss_pred EEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence 9999999999999998865 556777764
No 53
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.91 E-value=9.7e-23 Score=186.90 Aligned_cols=164 Identities=20% Similarity=0.328 Sum_probs=133.6
Q ss_pred HHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC-cChHHHHHHHHHHc----C--CCCC-CEEEeCC
Q 025730 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCG 154 (249)
Q Consensus 86 ~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~la~~~----~--~~~~-~I~vt~G 154 (249)
...+....+.++++|+.+.++...|+.+.+++.. .. ....|++ .|..+||+++|+++ + ++++ +|++|+|
T Consensus 24 ~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G 103 (403)
T PRK08636 24 LKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMG 103 (403)
T ss_pred HHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCC
Confidence 3344444556789999999888777777766654 32 2467965 58999999999997 5 5676 7999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHH----HHhhcc--CCceEEEEcC
Q 025730 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELI----ADAVER--EKPKCIFLTS 226 (249)
Q Consensus 155 a~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l----~~~i~~--~~~k~i~l~~ 226 (249)
++++|.++++++++|||.|++++|+|..|...++..|++++.++. ++++++|++.+ ++++++ .+++++++||
T Consensus 104 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~ 183 (403)
T PRK08636 104 SKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNF 183 (403)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeC
Confidence 999999999999999999999999999999999999999999986 35588998754 555542 4789999999
Q ss_pred CCCccccCCChHHH--HHHHhhhhC
Q 025730 227 PNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
||||||.+++.+++ +.++|++||
T Consensus 184 P~NPTG~~~s~~~~~~l~~~a~~~~ 208 (403)
T PRK08636 184 PHNPTTATVEKSFYERLVALAKKER 208 (403)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcC
Confidence 99999999999865 566788875
No 54
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.90 E-value=1e-22 Score=186.48 Aligned_cols=155 Identities=20% Similarity=0.351 Sum_probs=134.1
Q ss_pred CCCeeeccCCCCC----CCCCHHHHHHHHh-ccC--CCCC-CCcChHHHHHHHHHHcC-----CCCCCEEEeCCHHHHHH
Q 025730 94 PEDIVKIDANENP----YGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELID 160 (249)
Q Consensus 94 ~~~~I~L~~~~~~----~~~p~~v~~al~~-~~~--~~~Y-p~~g~~~lr~~la~~~~-----~~~~~I~vt~Ga~~~l~ 160 (249)
.+++++|+.|+++ +++++.+.+++.+ +.. ...| |..|..+||++++++++ +++++|++|+|+++++.
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~ 109 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIE 109 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHH
Confidence 4678999999984 7888999888876 332 2568 67789999999999996 78899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 161 ~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
+++.+++++||+|++++|+|..|...++..|++++.++.+ +++++|++.++++++ .++++|+++|||||||.+++.+
T Consensus 110 ~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~~ 188 (401)
T TIGR01264 110 MCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID-EKTAALIVNNPSNPCGSVFSRQ 188 (401)
T ss_pred HHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc-cCceEEEEcCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999853 458899999999887 5789999999999999999877
Q ss_pred HH--HHHHhhhhC
Q 025730 239 SW--IWGISSEHN 249 (249)
Q Consensus 239 e~--i~~i~~~~~ 249 (249)
++ +.++|+++|
T Consensus 189 ~~~~l~~~a~~~~ 201 (401)
T TIGR01264 189 HLEEILAVAERQC 201 (401)
T ss_pred HHHHHHHHHHHCC
Confidence 54 566777764
No 55
>PRK07324 transaminase; Validated
Probab=99.90 E-value=2.2e-23 Score=189.50 Aligned_cols=158 Identities=21% Similarity=0.195 Sum_probs=134.5
Q ss_pred hCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCC-CcChHHHHHHHHHHcC-CCCCCEEEeCCHHHHHHHHHHH
Q 025730 90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDSG-LESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 90 ~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp-~~g~~~lr~~la~~~~-~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
++....++++|+.+++.+.+|+.+ +++.. +. ....|+ ..|.++||++++++++ +++++|++|+|+++++.+++.+
T Consensus 21 ~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~ 99 (373)
T PRK07324 21 YDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYA 99 (373)
T ss_pred cccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHH
Confidence 344567899999999999888877 65543 32 235784 4689999999999984 7899999999999999999999
Q ss_pred hcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 166 ~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
++++||+|+++.|+|..|...++..|++++.++.+ .++.+|++++++.++ .++|+|+++|||||||.+++.+++ +
T Consensus 100 l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~kli~i~~p~NPtG~~~~~~~l~~i 178 (373)
T PRK07324 100 LVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-PNTKLICINNANNPTGALMDRAYLEEI 178 (373)
T ss_pred hCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-CCCcEEEEeCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999964 346789999999887 689999999999999999987644 6
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|++||
T Consensus 179 ~~~a~~~~ 186 (373)
T PRK07324 179 VEIARSVD 186 (373)
T ss_pred HHHHHHCC
Confidence 67788875
No 56
>PRK12414 putative aminotransferase; Provisional
Probab=99.90 E-value=1.1e-22 Score=185.35 Aligned_cols=154 Identities=21% Similarity=0.407 Sum_probs=133.1
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCC-CCcChHHHHHHHHHHc----CCC--C-CCEEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS----GLE--S-DHILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~la~~~----~~~--~-~~I~vt~Ga~~~l~~~~~ 164 (249)
.++|+|+.|++++++++.+.+++.+ +. ....| |..|..+||+++++++ |++ + ++|++|+|++++|.++++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~ 108 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAIS 108 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHH
Confidence 5689999999999999999988875 32 23679 5568999999999875 653 3 689999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
+++.+||+|++++|+|..|...++..|++++.++.+ +++.+|++.++++++ .++|+|+++|||||||.+++.+++ +
T Consensus 109 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~NPTG~~~s~~~~~~i 187 (384)
T PRK12414 109 ALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTPHNPSATVFSAADLARL 187 (384)
T ss_pred HhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-cccEEEEEcCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999975 467899999999997 689999999999999999987755 5
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
..+|++||
T Consensus 188 ~~~a~~~~ 195 (384)
T PRK12414 188 AQLTRNTD 195 (384)
T ss_pred HHHHHHCC
Confidence 66788765
No 57
>PRK08363 alanine aminotransferase; Validated
Probab=99.90 E-value=1.5e-22 Score=185.22 Aligned_cols=158 Identities=26% Similarity=0.456 Sum_probs=134.8
Q ss_pred CCCCCCeeeccCCCC---CCCCCHHHHHHHHh-ccC-CCCCC-CcChHHHHHHHHHHc----C--CCCCCEEEeCCHHHH
Q 025730 91 GRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADEL 158 (249)
Q Consensus 91 g~~~~~~I~L~~~~~---~~~~p~~v~~al~~-~~~-~~~Yp-~~g~~~lr~~la~~~----~--~~~~~I~vt~Ga~~~ 158 (249)
+..+.++|+|+.|.+ ++++++.+.+++.+ +.. ...|+ ..|..+||+++++++ | +++++|++|+|++++
T Consensus 26 ~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 105 (398)
T PRK08363 26 EKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA 105 (398)
T ss_pred HhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 445578999999998 78889999998876 322 35684 578999999999997 3 688999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEe-cCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v-~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
+.+++.+++++||.|++++|+|..|...++..|++++.+ +.+ +++.+|++.++++++ .++++|+++|||||||.+++
T Consensus 106 l~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~ 184 (398)
T PRK08363 106 LQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-EKTKAIAVINPNNPTGALYE 184 (398)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-cceEEEEEECCCCCCCcCcC
Confidence 999999999999999999999999999999999999988 443 456799999999987 68899999999999999998
Q ss_pred hHHH--HHHHhhhhC
Q 025730 237 TSSW--IWGISSEHN 249 (249)
Q Consensus 237 ~~e~--i~~i~~~~~ 249 (249)
.+++ +.++|+++|
T Consensus 185 ~~~~~~l~~~a~~~~ 199 (398)
T PRK08363 185 KKTLKEILDIAGEHD 199 (398)
T ss_pred HHHHHHHHHHHHHcC
Confidence 7644 666787764
No 58
>PRK07682 hypothetical protein; Validated
Probab=99.90 E-value=1.3e-22 Score=184.23 Aligned_cols=154 Identities=30% Similarity=0.460 Sum_probs=132.4
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCC-CcChHHHHHHHHHHcC------CCCC-CEEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp-~~g~~~lr~~la~~~~------~~~~-~I~vt~Ga~~~l~~~~~ 164 (249)
+++|+|+.|++++++++.+.+++.+ +. ....|+ ..|..+||++++++++ ++++ +|++|+|++++|.+++.
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 4679999999999988888887765 32 235685 5789999999999973 4565 79999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW-- 240 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~-- 240 (249)
+++++||+|++++|+|..|...++..|++++.++.+ +++++|++++++++. .++++|++++||||||.+++.+++
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~s~~~~~~ 178 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-AKTKAILLCSPNNPTGAVLNKSELEE 178 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-cccEEEEEECCCCCcCcCcCHHHHHH
Confidence 999999999999999999999999999999999853 468999999999997 689999999999999999987744
Q ss_pred HHHHhhhhC
Q 025730 241 IWGISSEHN 249 (249)
Q Consensus 241 i~~i~~~~~ 249 (249)
+..+|++||
T Consensus 179 l~~~~~~~~ 187 (378)
T PRK07682 179 IAVIVEKHD 187 (378)
T ss_pred HHHHHHHcC
Confidence 667888765
No 59
>PRK09148 aminotransferase; Validated
Probab=99.90 E-value=1.5e-22 Score=185.85 Aligned_cols=156 Identities=21% Similarity=0.340 Sum_probs=127.8
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC-cChHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~la~~~----~--~~~~-~I~vt~Ga~~~l~~ 161 (249)
.++++|+|+.|++++++++.+.+++.+ +. ...+|++ .|..+||+++++++ | ++++ +|++|+|++++|.+
T Consensus 28 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~ 107 (405)
T PRK09148 28 AGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFAN 107 (405)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 345789999999999888888888765 32 2367965 47999999999987 4 5676 89999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCC--CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~--~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
++..++++||+|++++|+|..|...++..|++++.++.+.+ +..++++..+... .++++|+++|||||||.+++.++
T Consensus 108 ~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~~ 186 (405)
T PRK09148 108 MAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLDF 186 (405)
T ss_pred HHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHHH
Confidence 99999999999999999999999999999999999996433 3334554444333 57899999999999999998875
Q ss_pred H--HHHHhhhhC
Q 025730 240 W--IWGISSEHN 249 (249)
Q Consensus 240 ~--i~~i~~~~~ 249 (249)
+ +.++|++||
T Consensus 187 l~~l~~~a~~~~ 198 (405)
T PRK09148 187 YKDVVAFAKKHD 198 (405)
T ss_pred HHHHHHHHHHcC
Confidence 4 667788765
No 60
>PRK05839 hypothetical protein; Provisional
Probab=99.90 E-value=1.1e-22 Score=184.83 Aligned_cols=161 Identities=21% Similarity=0.292 Sum_probs=129.8
Q ss_pred HHHHHhCCC-CCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCc-ChHHHHHHHHHHc----C--CCCCCEEEeCCH
Q 025730 85 VLSIQLGRK-PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGA 155 (249)
Q Consensus 85 ~~~~~~g~~-~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~-g~~~lr~~la~~~----~--~~~~~I~vt~Ga 155 (249)
.+...+..+ +.++++|+.|++++++++.+.+++.+ ......|+++ |..+||+++++++ | +++++|++|+|+
T Consensus 13 ~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~ 92 (374)
T PRK05839 13 ELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGT 92 (374)
T ss_pred HHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCc
Confidence 333434334 44899999999999999999998876 3445779764 7899999998875 5 689999999999
Q ss_pred HHHHHHHHHHhc--CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCcc
Q 025730 156 DELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (249)
Q Consensus 156 ~~~l~~~~~~~~--~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPT 231 (249)
+++|..++..++ .+||.|+++.|+|..|...++..|++++.++.+. ++.+|+++.+ + .++|+|+||||||||
T Consensus 93 ~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~NPT 168 (374)
T PRK05839 93 REVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L--QEVDLVILNSPNNPT 168 (374)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h--ccccEEEEeCCCCCc
Confidence 999999988764 4789999999999999999999999999999743 4666655432 3 468999999999999
Q ss_pred ccCCChHHH--HHHHhhhhC
Q 025730 232 GRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 232 G~~~~~~e~--i~~i~~~~~ 249 (249)
|.+++.+++ +.++|+++|
T Consensus 169 G~~~s~~~l~~i~~~~~~~~ 188 (374)
T PRK05839 169 GRTLSLEELIEWVKLALKHD 188 (374)
T ss_pred CcccCHHHHHHHHHHHHHcC
Confidence 999988865 455677764
No 61
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.7e-22 Score=183.30 Aligned_cols=154 Identities=25% Similarity=0.397 Sum_probs=134.0
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccC-CCCCCC-cChHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~-~~~Yp~-~g~~~lr~~la~~~----~--~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
+++|+|+.|++++++++.+.+++.+ +.. ...|++ .|.++||+++++++ | +++++|++|+|+++++.+++..
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~ 103 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQA 103 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHH
Confidence 4689999999999999999999876 322 246865 58999999999986 5 7889999999999999999999
Q ss_pred hcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC---CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--
Q 025730 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW-- 240 (249)
Q Consensus 166 ~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~---~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~-- 240 (249)
++++||+|++++|+|..|...++..|++++.++.+ .+|.+|++++++.++ .++++|++++||||||.+++.+++
T Consensus 104 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~p~NPtG~~~~~~~~~~ 182 (382)
T PRK06108 104 LVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRA 182 (382)
T ss_pred hcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-ccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999964 346799999999987 689999999999999999987644
Q ss_pred HHHHhhhhC
Q 025730 241 IWGISSEHN 249 (249)
Q Consensus 241 i~~i~~~~~ 249 (249)
+.++|+++|
T Consensus 183 l~~~~~~~~ 191 (382)
T PRK06108 183 ILAHCRRHG 191 (382)
T ss_pred HHHHHHHCC
Confidence 667787764
No 62
>PRK06855 aminotransferase; Validated
Probab=99.90 E-value=1.6e-22 Score=187.24 Aligned_cols=156 Identities=20% Similarity=0.248 Sum_probs=129.1
Q ss_pred CCCCeeeccCCCC---CCCCCHHHHHHHHhc-c--CCCCC-CCcChHHHHHHHHHHc----C--CCCCCEEEeCCHHHHH
Q 025730 93 KPEDIVKIDANEN---PYGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELI 159 (249)
Q Consensus 93 ~~~~~I~L~~~~~---~~~~p~~v~~al~~~-~--~~~~Y-p~~g~~~lr~~la~~~----~--~~~~~I~vt~Ga~~~l 159 (249)
.+.++++|+.|++ .+.+|+.+.+++.+. . ...+| |..|.++||+++++++ | +++++|++|+|++++|
T Consensus 30 ~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al 109 (433)
T PRK06855 30 LGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI 109 (433)
T ss_pred ccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence 3457899999998 678999998888762 2 23578 4578999999999997 3 6788999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCChhHHHHH-HHCCCEEEEecCC--CCCCCCHHHHHHhhcc-CCceEEEEcCCCCccccCC
Q 025730 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-EKPKCIFLTSPNNPDGRFS 235 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~P~y~~~~~~~-~~~G~~v~~v~~~--~~~~id~e~l~~~i~~-~~~k~i~l~~PnNPTG~~~ 235 (249)
.+++. ++.|||.|++++|+|+.|.... ...|++++.++.+ ++|.+|+++++++++. .+++++++||||||||.++
T Consensus 110 ~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~ 188 (433)
T PRK06855 110 AKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVY 188 (433)
T ss_pred HHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCC
Confidence 99985 7899999999999999887553 3468999999864 4578999999999863 3679999999999999999
Q ss_pred ChHHH--HHHHhhhhC
Q 025730 236 WTSSW--IWGISSEHN 249 (249)
Q Consensus 236 ~~~e~--i~~i~~~~~ 249 (249)
+.+++ +.++|++||
T Consensus 189 s~~~~~~l~~~a~~~~ 204 (433)
T PRK06855 189 PKEILREIVDIAREYD 204 (433)
T ss_pred CHHHHHHHHHHHHHcC
Confidence 99865 566788775
No 63
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.7e-22 Score=182.40 Aligned_cols=155 Identities=31% Similarity=0.494 Sum_probs=135.3
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC-cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP 169 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~p 169 (249)
..++|+|+.|++++++++.+.+++.+ +. ....|++ .|..+||+++++++++++++|++|+|+++++.+++++++.+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~ 106 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSP 106 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCC
Confidence 35689999999999999999999876 32 2356865 47899999999999999999999999999999999999999
Q ss_pred CCeEEEcCCCChhHHHHHHHCCCEEEEecCC---CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--HHHH
Q 025730 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--IWGI 244 (249)
Q Consensus 170 Gd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~---~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i~~i 244 (249)
||+|++++|+|..+...++..|++++.++.+ .++.+|++.+++.++ .++++|+++|||||||.+++.+++ +.++
T Consensus 107 gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~i~~~ 185 (380)
T PRK06225 107 GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEI 185 (380)
T ss_pred CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-CCceEEEEeCCCCCCCcCCCHHHHHHHHHH
Confidence 9999999999999988889999999999853 247899999999997 689999999999999999987654 6677
Q ss_pred hhhhC
Q 025730 245 SSEHN 249 (249)
Q Consensus 245 ~~~~~ 249 (249)
|+++|
T Consensus 186 a~~~~ 190 (380)
T PRK06225 186 ARDND 190 (380)
T ss_pred HHHCC
Confidence 88765
No 64
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.9e-22 Score=182.90 Aligned_cols=154 Identities=25% Similarity=0.432 Sum_probs=133.6
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCC-CCcChHHHHHHHHHHc------CCCCCCEEEeCCHHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
.++|+|+.|++++++++.+.+++.. +. ....| |..|..+||+++++++ ++++++|++|+|+++++.+++.+
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 112 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES 112 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHH
Confidence 4689999999999988888888876 32 22457 6778999999999997 36789999999999999999999
Q ss_pred hcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 166 ~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
++++||+|++++|+|..+...++..|++++.++.+. ++.+|++++++.++ .++++|+++|||||||.+++.+++ +
T Consensus 113 l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~i~~p~NPtG~~~~~~~~~~l 191 (391)
T PRK08361 113 LLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-KRTRMIVINYPNNPTGATLDKEVAKAI 191 (391)
T ss_pred hcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cccEEEEEeCCCCCCCcCcCHHHHHHH
Confidence 999999999999999999999999999999999643 56899999999998 689999999999999999987644 5
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|+++|
T Consensus 192 ~~~~~~~~ 199 (391)
T PRK08361 192 ADIAEDYN 199 (391)
T ss_pred HHHHHHcC
Confidence 66777764
No 65
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.90 E-value=2.3e-22 Score=179.92 Aligned_cols=137 Identities=23% Similarity=0.311 Sum_probs=114.8
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEE
Q 025730 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv 175 (249)
.+|+|+.|+||++.. ....+||++...+||+++++++++++++|++|+|++++|.++++ ++++| .|++
T Consensus 17 ~~i~l~~Nenp~~~~----------~~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~-~vv~ 84 (332)
T PRK06425 17 RIIDFSANINDFMDI----------GDISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVG-NIII 84 (332)
T ss_pred CEEEeccccCCCcCh----------hhcccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCC-cEEE
Confidence 579999999999522 22368999889999999999999999999999999999999997 56786 5777
Q ss_pred cCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 176 ~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
++|+|..|...++..|++++.+|.+. +++|.+.+++ .++|+|++||||||||.+++.+++ +.++|+++|
T Consensus 85 ~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~ 155 (332)
T PRK06425 85 VEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKG 155 (332)
T ss_pred eCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcC
Confidence 79999999999999999999999754 5667665543 478999999999999999988765 444566654
No 66
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.89 E-value=1.3e-22 Score=186.41 Aligned_cols=148 Identities=23% Similarity=0.381 Sum_probs=122.3
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-cc------CCCCC-CCcChHHHHHHHHHHc------CCCCCCEEEeCCHHHHH
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELI 159 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~------~~~~Y-p~~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~l 159 (249)
.+++++|+.|++++++++.+.+++.+ +. ....| |..|..+||+++++++ ++++++|++|+|++++|
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al 112 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT 112 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence 35689999999999999988888765 22 22578 6678999999999986 57899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCE-----------EEEecCCC--CCCCCHHHHHHhhccCCceEEEEcC
Q 025730 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~-----------v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
.+++ .++.|||+|++++|+|..|...++..|.+ ++.++.+. ++.+|++ +.++|+|++||
T Consensus 113 ~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-------~~~~k~i~l~n 184 (409)
T PRK07590 113 GNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-------EEKVDIIYLCF 184 (409)
T ss_pred HHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc-------ccCceEEEEeC
Confidence 9875 46789999999999999999999999987 88888653 3444422 25799999999
Q ss_pred CCCccccCCChHHH--HHHHhhhhC
Q 025730 227 PNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
||||||.+++.+++ +.++|++||
T Consensus 185 P~NPTG~~~s~~~~~~l~~~a~~~~ 209 (409)
T PRK07590 185 PNNPTGTVLTKEQLKAWVDYAKENG 209 (409)
T ss_pred CCCCcCCcCCHHHHHHHHHHHHHcC
Confidence 99999999998855 556788765
No 67
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.8e-22 Score=181.94 Aligned_cols=163 Identities=26% Similarity=0.419 Sum_probs=137.3
Q ss_pred HHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCC-CcChHHHHHHHHHHc------CCCCCCEEEeCCHH
Q 025730 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGAD 156 (249)
Q Consensus 86 ~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp-~~g~~~lr~~la~~~------~~~~~~I~vt~Ga~ 156 (249)
++........++++|+.|++++++++.+.+++.+ +. ....|+ ..|..+||+++++++ ++++++|++|+|++
T Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 101 (393)
T PRK05764 22 KAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAK 101 (393)
T ss_pred HHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcH
Confidence 3333333346789999999999988999888875 32 235684 467899999999997 46788999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 157 ~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
+++.+++..++++||.|++++|+|..|...++..|++++.++.+ .++.+|++++++.++ +++++|+++|||||||.+
T Consensus 102 ~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~ 180 (393)
T PRK05764 102 QALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT-PKTKALILNSPSNPTGAV 180 (393)
T ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-ccceEEEEECCCCCCCcc
Confidence 99999999999999999999999999999999999999999964 357899999999997 689999999999999999
Q ss_pred CChH--HHHHHHhhhhC
Q 025730 235 SWTS--SWIWGISSEHN 249 (249)
Q Consensus 235 ~~~~--e~i~~i~~~~~ 249 (249)
++.+ +.+.++|++||
T Consensus 181 ~~~~~~~~l~~~a~~~~ 197 (393)
T PRK05764 181 YSPEELEAIADVAVEHD 197 (393)
T ss_pred cCHHHHHHHHHHHHHCC
Confidence 8866 44677788775
No 68
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=3.3e-22 Score=181.20 Aligned_cols=162 Identities=33% Similarity=0.509 Sum_probs=130.8
Q ss_pred HHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHHcCCC
Q 025730 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145 (249)
Q Consensus 66 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~~~~~ 145 (249)
++++.+..+.+|...... .....++++.|++++++++.. .....+||+++..+||+++|++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ne~~~~~~~~~------~~~~~~Y~~~~~~~lr~~ia~~~~~~ 75 (364)
T PRK04781 11 LVREDLRAFAGYSSARSS---------ALQGDVWLNANESAWANPADP------DASTRRYPDPQPPGLRSALAALYGCA 75 (364)
T ss_pred HhhHHhhcCCCCCCCCcc---------ccCCCEEeeCCCCCCCCChhh------cchhccCCCCCHHHHHHHHHHHhCcC
Confidence 345666767776432210 112468999999999887642 12236799888899999999999999
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCChhHHHHHHHCCCEEEEecCC---CCCCCCHHHHHHhhccCCceE
Q 025730 146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKC 221 (249)
Q Consensus 146 ~~~I~vt~Ga~~~l~~~~~~~~~pG-d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~---~~~~id~e~l~~~i~~~~~k~ 221 (249)
+++|++|+|++++|.+++++++.+| |+|++++|+|..|...++..|++++.++.+ +++.+|++++++.+.+.++++
T Consensus 76 ~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~l 155 (364)
T PRK04781 76 PEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKL 155 (364)
T ss_pred hHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeE
Confidence 9999999999999999999999999 799999999999999999999999999963 246689999877654478999
Q ss_pred EEEcCCCCccccCCChHHHHH
Q 025730 222 IFLTSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 222 i~l~~PnNPTG~~~~~~e~i~ 242 (249)
|++||||||||.+++.+++.+
T Consensus 156 v~l~~p~NPTG~~~~~~~~~~ 176 (364)
T PRK04781 156 VFLCSPSNPAGSAIALDQIER 176 (364)
T ss_pred EEEcCCCCCCCCCcCHHHHHH
Confidence 999999999999987765543
No 69
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=7.1e-23 Score=192.45 Aligned_cols=157 Identities=25% Similarity=0.402 Sum_probs=126.0
Q ss_pred CCCCeeeccCCCCCC--CC-CHHHHHHHHh----c------cCCCCCCC-cChHHHHHHHHHHcC--------CCCCCEE
Q 025730 93 KPEDIVKIDANENPY--GP-PPEVREALGQ----L------KFPYIYPD-PESRRLRAALAKDSG--------LESDHIL 150 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~--~~-p~~v~~al~~----~------~~~~~Yp~-~g~~~lr~~la~~~~--------~~~~~I~ 150 (249)
.+..+|+|+.+||++ +. ++.+.+.... . .....|++ .|.++||+++|++++ +++++|+
T Consensus 44 np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Iv 123 (496)
T PLN02376 44 NPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVV 123 (496)
T ss_pred CCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEE
Confidence 345789999999988 43 4555544321 0 11133533 478999999999974 6899999
Q ss_pred EeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHH-HCCCEEEEecCC--CCCCCCHHHHHHhhc-----cCCceEE
Q 025730 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCI 222 (249)
Q Consensus 151 vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~-~~G~~v~~v~~~--~~~~id~e~l~~~i~-----~~~~k~i 222 (249)
+|+|++++|.+++.++++|||.|++++|+|+.|...+. ..|++++.|+.+ ++|++|+++++++++ ..++|+|
T Consensus 124 it~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l 203 (496)
T PLN02376 124 MSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGL 203 (496)
T ss_pred EccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence 99999999999999999999999999999999998777 489999999973 568999999987642 1478999
Q ss_pred EEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 223 FLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 223 ~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
++||||||||.+++.+++ +..+|++||
T Consensus 204 ~l~nP~NPTG~~~s~e~l~~L~~~a~~~~ 232 (496)
T PLN02376 204 ILTNPSNPLGTMLDKDTLTNLVRFVTRKN 232 (496)
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 999999999999998865 556777764
No 70
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.89 E-value=1e-22 Score=188.27 Aligned_cols=152 Identities=18% Similarity=0.218 Sum_probs=129.3
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCC-cChHHHHHHHHHHcC--CC-CCCEEEeCCHHHHHHHHHHHhcCC
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKDSG--LE-SDHILVGCGADELIDLIMRCVLDP 169 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~-~g~~~lr~~la~~~~--~~-~~~I~vt~Ga~~~l~~~~~~~~~p 169 (249)
..+++|+.|.++.++++.+.+++.+ ......|++ .|..+||++++++++ +. +++|++|+|++++|.++++++++|
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~p 164 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLP 164 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCC
Confidence 3468999998887776777787776 333357876 467999999999986 33 469999999999999999999999
Q ss_pred CCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEc-CCCCccccCCChHH--HHHHHhh
Q 025730 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGRFSWTSS--WIWGISS 246 (249)
Q Consensus 170 Gd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~-~PnNPTG~~~~~~e--~i~~i~~ 246 (249)
||.|++++|+|..|...++..|++++.++.+++ ++|+++++++++ .++|+++++ |||||||.+++.++ .+.++|+
T Consensus 165 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~-~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~ 242 (431)
T PRK15481 165 GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALA-QGARAVILTPRAHNPTGCSLSARRAAALRNLLA 242 (431)
T ss_pred CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHh-cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999998544 699999999997 579999998 99999999998874 4666777
Q ss_pred hh
Q 025730 247 EH 248 (249)
Q Consensus 247 ~~ 248 (249)
++
T Consensus 243 ~~ 244 (431)
T PRK15481 243 RY 244 (431)
T ss_pred hc
Confidence 76
No 71
>PRK08912 hypothetical protein; Provisional
Probab=99.89 E-value=3.9e-22 Score=181.76 Aligned_cols=154 Identities=23% Similarity=0.350 Sum_probs=133.0
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-c-cCCCCCCC-cChHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~-~~~~~Yp~-~g~~~lr~~la~~~----~--~~~~-~I~vt~Ga~~~l~~~~~ 164 (249)
.++|+|+.|.++.+.|+.+.+++.+ + ....+|++ .|..+||+++++++ | ++++ +|++|+|+++++.+++.
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 105 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL 105 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHH
Confidence 4679999999998878888877665 3 23367965 57899999999986 3 5677 99999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
.++++||+|++++|+|..|...++..|++++.++.+ +++++|++++++.+. .++|+|+++|||||||.+++.+++ +
T Consensus 106 ~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~i 184 (387)
T PRK08912 106 ALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELALL 184 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-ccceEEEEeCCCCCcCcccCHHHHHHH
Confidence 999999999999999999999999999999999974 468999999999987 689999999999999999987754 6
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|++||
T Consensus 185 ~~~~~~~~ 192 (387)
T PRK08912 185 AEFCQRHD 192 (387)
T ss_pred HHHHHHCC
Confidence 67788765
No 72
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=2.6e-22 Score=179.97 Aligned_cols=140 Identities=28% Similarity=0.402 Sum_probs=120.2
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCCcChHHHHHHHHHHcC---CCCCCEEEeCCHHHHHHHHHHHhc
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVL 167 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~~g~~~lr~~la~~~~---~~~~~I~vt~Ga~~~l~~~~~~~~ 167 (249)
+.++|+|+.|+|++++|+.+++++.+ +. ....||+++..+||++++++++ +++++|++|+|++++|.++++++
T Consensus 18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~- 96 (335)
T PRK14808 18 KRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF- 96 (335)
T ss_pred CCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh-
Confidence 45789999999999999999999875 32 2255887889999999999998 88999999999999999999977
Q ss_pred CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHH
Q 025730 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWG 243 (249)
Q Consensus 168 ~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~ 243 (249)
|.|++++|+|..|...++..|++++.++.++++.++... + .++++++++|||||||.+++.+++.+.
T Consensus 97 ---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~--~~~~~i~i~nP~NPTG~~~s~~~l~~l 163 (335)
T PRK14808 97 ---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V--GEGDVVFIPNPNNPTGHVFEREEIERI 163 (335)
T ss_pred ---CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c--cCCCEEEEeCCCCCCCCCcCHHHHHHH
Confidence 789999999999999999999999999987777665432 2 356899999999999999987766443
No 73
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.8e-22 Score=180.96 Aligned_cols=154 Identities=27% Similarity=0.386 Sum_probs=131.9
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCC-cChHHHHHHHHHHc-----CCCCCCEEEeCCHHHHHHHHHHHhc
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKDS-----GLESDHILVGCGADELIDLIMRCVL 167 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~-~g~~~lr~~la~~~-----~~~~~~I~vt~Ga~~~l~~~~~~~~ 167 (249)
.++++|+.|++++++++.+.+++.+ ......|+. .|..+||+++++++ ++++++|++|+|+++++.+++..++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~ 109 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAIC 109 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhc
Confidence 4689999999999999999999876 333467854 58999999999997 4788999999999999999999999
Q ss_pred CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCC-CHHHHHHhhccCCceEEEEcCCCCccccCCChHH--HHH
Q 025730 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSL-NVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS--WIW 242 (249)
Q Consensus 168 ~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~i-d~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e--~i~ 242 (249)
++||+|++++|+|..|...++..|++++.++.+ .++.. |+++++++++ .++++|+++|||||||.+++.++ .+.
T Consensus 110 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i~ 188 (397)
T PRK07568 110 DPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEMLA 188 (397)
T ss_pred CCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-ccceEEEEECCCCCCCccCCHHHHHHHH
Confidence 999999999999999998889999999999964 33443 6899999987 68999999999999999988764 467
Q ss_pred HHhhhhC
Q 025730 243 GISSEHN 249 (249)
Q Consensus 243 ~i~~~~~ 249 (249)
++|+++|
T Consensus 189 ~~~~~~~ 195 (397)
T PRK07568 189 EIAKKHD 195 (397)
T ss_pred HHHHHCC
Confidence 7888764
No 74
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.89 E-value=6.1e-22 Score=180.82 Aligned_cols=154 Identities=27% Similarity=0.408 Sum_probs=132.6
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCC-CcChHHHHHHHHHHc----CC--C-CCCEEEeCCHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYP-DPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIM 163 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp-~~g~~~lr~~la~~~----~~--~-~~~I~vt~Ga~~~l~~~~ 163 (249)
.++++|+.|++++++++.+.+++.+ +. ....|+ ..|..++|+++++++ |+ + +++|++|+|+++++..++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~ 106 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI 106 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence 4579999999999999999999875 22 224684 467888888888775 65 3 678999999999999999
Q ss_pred HHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 164 ~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
..++++||+|++++|+|..+...++..|++++.++.++++++|+++++++++ .++|+|+++|||||||.+++.+++ +
T Consensus 107 ~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~klv~~~~p~NPtG~~~~~~~~~~i 185 (389)
T PRK05957 107 LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-PKTRAIVTISPNNPTGVVYPEALLRAV 185 (389)
T ss_pred HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-cCceEEEEeCCCCCCCcCcCHHHHHHH
Confidence 9999999999999999999988888899999999987788999999999997 689999999999999999987644 6
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
..+|+++|
T Consensus 186 ~~~a~~~~ 193 (389)
T PRK05957 186 NQICAEHG 193 (389)
T ss_pred HHHHHHcC
Confidence 67888875
No 75
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.89 E-value=8.1e-22 Score=180.15 Aligned_cols=155 Identities=27% Similarity=0.404 Sum_probs=132.1
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccC-CCCC-CCcChHHHHHHHHHHc----CC--C-CCCEEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIY-PDPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~-~~~Y-p~~g~~~lr~~la~~~----~~--~-~~~I~vt~Ga~~~l~~~~~ 164 (249)
+++|+|+.|++++++++.+.+++.+ +.. ...| |..|.++||+++++++ ++ + +++|++|+|+++++.+++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 109 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT 109 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 5689999999999999988888875 322 2468 4567999999999987 33 3 4789999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC-CCCCCHHHHHHhhcc--CCceEEEEcCCCCccccCCChHHH-
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER--EKPKCIFLTSPNNPDGRFSWTSSW- 240 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~-~~~id~e~l~~~i~~--~~~k~i~l~~PnNPTG~~~~~~e~- 240 (249)
.++++||+|++++|+|..|...++..|++++.++.+. ++.+|++++++++++ .++++|+++|||||||.+++.+++
T Consensus 110 ~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~ 189 (391)
T PRK07309 110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIK 189 (391)
T ss_pred HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHH
Confidence 9999999999999999999999999999999999644 478999999999863 368999999999999999987644
Q ss_pred -HHHHhhhhC
Q 025730 241 -IWGISSEHN 249 (249)
Q Consensus 241 -i~~i~~~~~ 249 (249)
+.++|++||
T Consensus 190 ~l~~~~~~~~ 199 (391)
T PRK07309 190 ALADVLKKYD 199 (391)
T ss_pred HHHHHHHHcC
Confidence 667888875
No 76
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=1.6e-22 Score=181.61 Aligned_cols=149 Identities=19% Similarity=0.228 Sum_probs=119.6
Q ss_pred CCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHHcCCC-CCCEEEeCC
Q 025730 76 PYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCG 154 (249)
Q Consensus 76 ~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~~~~~-~~~I~vt~G 154 (249)
+..++..+..++..+|.++.++|+|+.|+||+++|+..... . ...+||+.. .+||+++++++|+. +++|++|+|
T Consensus 5 ~~~hg~~~~~~~~~~~~~~~~~i~ls~Nenp~~~~~~~~~~-~---~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~G 79 (339)
T PRK06959 5 PIAHGGNLHEAARRYGIPYDAWLDLSTGINPHGYPVPPVPA-D---AWRRLPEDD-DGLAACAARYYGAPDAAHVLPVAG 79 (339)
T ss_pred CcCCCchHHHHHHHcCCChhhhceeccCCCCCCCCCCCCCH-H---HHHhCCCch-HHHHHHHHHHhCCCCcccEEECcC
Confidence 44567777777888887777889999999999887322211 1 125699876 89999999999996 589999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 155 a~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
++++|.++.. ++++|| |++++|+|..|...++..|++++.++.+. +.+ . ..++++++||||||||.+
T Consensus 80 s~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~~----~-~~~~~v~l~nPnNPTG~~ 146 (339)
T PRK06959 80 SQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DTL----P-AALTHLIVVNPNNPTAER 146 (339)
T ss_pred HHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc------hhc----c-ccCCEEEEeCCCCCCCCC
Confidence 9999998765 578876 88999999999999999999999998643 222 2 346789999999999999
Q ss_pred CChHHHHH
Q 025730 235 SWTSSWIW 242 (249)
Q Consensus 235 ~~~~e~i~ 242 (249)
++.+++.+
T Consensus 147 ~s~~~l~~ 154 (339)
T PRK06959 147 LPAARLLR 154 (339)
T ss_pred CCHHHHHH
Confidence 98887644
No 77
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.89 E-value=1.1e-21 Score=179.46 Aligned_cols=155 Identities=16% Similarity=0.185 Sum_probs=125.2
Q ss_pred CCeeeccCCC---CCCCCC--HHHHHHHHhc-c--CCCCC-CCcChHHHHHHHHHHc---C---CCCCCE--EEeCCHHH
Q 025730 95 EDIVKIDANE---NPYGPP--PEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS---G---LESDHI--LVGCGADE 157 (249)
Q Consensus 95 ~~~I~L~~~~---~~~~~p--~~v~~al~~~-~--~~~~Y-p~~g~~~lr~~la~~~---~---~~~~~I--~vt~Ga~~ 157 (249)
+++|+|+.|. +++.+| +.+.+++.+. . ....| +..|.++||+++++++ + +++++| ++|+|+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~ 105 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG 105 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence 4679999995 334444 6788887763 2 22468 4568999999999997 2 367877 99999999
Q ss_pred HHHHHHHHh--cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhcc--CCceEEEEcCCCCcc
Q 025730 158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD 231 (249)
Q Consensus 158 ~l~~~~~~~--~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~--~~~k~i~l~~PnNPT 231 (249)
+|.++++.+ ++|||+|++++|+|..|...++..|++++.++. .+++++|++.+++++++ .++++++++||||||
T Consensus 106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT 185 (396)
T PRK09257 106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT 185 (396)
T ss_pred HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 999998765 589999999999999999999999999999996 34689999999998763 234566668999999
Q ss_pred ccCCChHHH--HHHHhhhhC
Q 025730 232 GRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 232 G~~~~~~e~--i~~i~~~~~ 249 (249)
|.+++.+++ +.++|++||
T Consensus 186 G~~~s~~~~~~l~~~a~~~~ 205 (396)
T PRK09257 186 GADLTPEQWDELAELLKERG 205 (396)
T ss_pred CCCCCHHHHHHHHHHHHhCC
Confidence 999999865 567888775
No 78
>PRK07908 hypothetical protein; Provisional
Probab=99.89 E-value=7.6e-22 Score=177.52 Aligned_cols=145 Identities=26% Similarity=0.371 Sum_probs=124.3
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCC-cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~-~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd 171 (249)
..++++|+.|+|++++|+.+++++.+ +.....||+ .|..+||+++++++++++++|++|+|++++|.++++ +++ +
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~-~ 97 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRP-R 97 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCC-C
Confidence 46789999999999999999999886 434467976 488999999999999999999999999999999998 567 4
Q ss_pred eEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhh
Q 025730 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSE 247 (249)
Q Consensus 172 ~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~ 247 (249)
.+++..|+|..+...++..|.+++.++.++++++|++.+ + .++++++++|||||||.+++.+++ ..++++
T Consensus 98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-~~~~~i~l~np~NPTG~~~~~~~l-~~l~~~ 167 (349)
T PRK07908 98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-DDADLVVIGNPTNPTSVLHPAEQL-LALRRP 167 (349)
T ss_pred eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-cCCCEEEEcCCCCCCCCCcCHHHH-HHHHhc
Confidence 677789999999999999999999999876688999855 3 578999999999999999987654 455543
No 79
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.88 E-value=2.6e-22 Score=184.02 Aligned_cols=149 Identities=21% Similarity=0.351 Sum_probs=122.8
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-cc------CCCCC-CCcChHHHHHHHHHHc---CCCCCCEEEeCCHHHHHHHH
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS---GLESDHILVGCGADELIDLI 162 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~------~~~~Y-p~~g~~~lr~~la~~~---~~~~~~I~vt~Ga~~~l~~~ 162 (249)
..++|+|+.|++++++++.+.+++.. +. ....| |..|.++||+++|+++ ++++++|++|+|++++|.++
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l 111 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL 111 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH
Confidence 46789999999999999988888765 22 12458 6779999999999986 68899999999999999987
Q ss_pred HHHhcCCCCeEEEcCCCChhHHHHHHHCCC-----------EEEEecCCC--CCCCCHHHHHHhhccCCceEEEEcCCCC
Q 025730 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-----------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNN 229 (249)
Q Consensus 163 ~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~-----------~v~~v~~~~--~~~id~e~l~~~i~~~~~k~i~l~~PnN 229 (249)
+ .++.+||+|++++|+|..|...++..|+ +++.++.+. ++.+|++. ..++|+|++|||||
T Consensus 112 ~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~i~l~nP~N 184 (402)
T TIGR03542 112 Q-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------EPKIDIIYLCSPNN 184 (402)
T ss_pred H-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------cCCceEEEEeCCCC
Confidence 5 4668999999999999999999999999 999998643 34444321 15789999999999
Q ss_pred ccccCCChHHH--HHHHhhhhC
Q 025730 230 PDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 230 PTG~~~~~~e~--i~~i~~~~~ 249 (249)
|||.+++.+++ +.++|++||
T Consensus 185 PTG~~~s~~~~~~l~~~a~~~~ 206 (402)
T TIGR03542 185 PTGTVLTKEQLKELVDYANEHG 206 (402)
T ss_pred CCCccCCHHHHHHHHHHHHHcC
Confidence 99999998755 556777764
No 80
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.7e-21 Score=178.18 Aligned_cols=152 Identities=28% Similarity=0.548 Sum_probs=132.5
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc----CCCCC-CCcChHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK----FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDLI 162 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~----~~~~Y-p~~g~~~lr~~la~~~~------~~~~~I~vt~Ga~~~l~~~ 162 (249)
+++++|+.+.+++++++.+.+++.+ .. ...+| +..|..++|++++++++ +++++|++|+|++++|..+
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA 112 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH
Confidence 5689999998888888888888865 22 13678 55789999999999973 6789999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCC-CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH-
Q 025730 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW- 240 (249)
Q Consensus 163 ~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~-~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~- 240 (249)
++.++++||.|++++|+|..|...++..|++++.++.+++ +++|+++++++++ .++++|++++||||||.+++.+++
T Consensus 113 ~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~~~~~ 191 (394)
T PRK06836 113 LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLK 191 (394)
T ss_pred HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-cCceEEEEeCCCCCCCcCCCHHHHH
Confidence 9999999999999999999999999999999999997655 7899999999997 689999999999999999988755
Q ss_pred -HHHHhhh
Q 025730 241 -IWGISSE 247 (249)
Q Consensus 241 -i~~i~~~ 247 (249)
+.++|++
T Consensus 192 ~l~~la~~ 199 (394)
T PRK06836 192 ALAALLEE 199 (394)
T ss_pred HHHHHHHH
Confidence 5567776
No 81
>PRK09082 methionine aminotransferase; Validated
Probab=99.88 E-value=3.7e-21 Score=175.45 Aligned_cols=154 Identities=24% Similarity=0.453 Sum_probs=132.7
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCC-CcChHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp-~~g~~~lr~~la~~~----~~--~~~-~I~vt~Ga~~~l~~~~~ 164 (249)
.++|+|+.|++++++++.+.+++.+ +. ...+|+ ..|..+||+++++++ ++ +++ +|++|+|++++|.+++.
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~ 109 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAIL 109 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHH
Confidence 4679999999999888888888876 32 236784 468899999999874 54 344 79999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
.++++||+|++++|+|..|...++..|++++.++.+ +++.+|+++++++++ .++++|++++||||||.+++.+++ +
T Consensus 110 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~~i 188 (386)
T PRK09082 110 ALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-PRTRLIILNTPHNPSGTVWSAADMRAL 188 (386)
T ss_pred HHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-ccceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999974 468899999999997 689999999999999999988755 6
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|++||
T Consensus 189 ~~~a~~~~ 196 (386)
T PRK09082 189 WQLIAGTD 196 (386)
T ss_pred HHHHHHCC
Confidence 77888875
No 82
>PRK07683 aminotransferase A; Validated
Probab=99.88 E-value=2.2e-21 Score=177.08 Aligned_cols=154 Identities=25% Similarity=0.447 Sum_probs=133.2
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCC-CcChHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp-~~g~~~lr~~la~~~----~--~~~~-~I~vt~Ga~~~l~~~~~ 164 (249)
+++|+|+.+.+.+++++.+.+++.+ +. ....|+ ..|..+||+++++++ | ++++ +|++|+|+++++.+++.
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~ 107 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFR 107 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 5679999999988888888888876 32 236784 578999999999997 4 4677 99999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--H
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--I 241 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i 241 (249)
.++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.++ .++++|+++|||||||.+++.+++ +
T Consensus 108 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~i~i~~p~NPtG~~~s~~~~~~l 186 (387)
T PRK07683 108 TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDI 186 (387)
T ss_pred HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC-cCceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999964 457789999999987 689999999999999999987754 6
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
..+|+++|
T Consensus 187 ~~~~~~~~ 194 (387)
T PRK07683 187 ADVLKDKN 194 (387)
T ss_pred HHHHHHcC
Confidence 67787764
No 83
>PLN02672 methionine S-methyltransferase
Probab=99.88 E-value=1.7e-21 Score=193.81 Aligned_cols=181 Identities=18% Similarity=0.294 Sum_probs=141.6
Q ss_pred hccCCCChHHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCC-CCCcC-hHHH
Q 025730 58 QRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI-YPDPE-SRRL 134 (249)
Q Consensus 58 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~-Yp~~g-~~~l 134 (249)
...+.......+.+.....+.. +..+.++|+|+.|+|++++|+.+++++.+ +..... ++.+. ...+
T Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~-----------~~~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aL 739 (1082)
T PLN02672 671 SKFIGFSSSARSALKEAELSVS-----------GSQESSLIHMDVDESFLPVPSAVKASIFESFVRQNISESETDPRPSI 739 (1082)
T ss_pred HhhhCCCchhHHHHHhcccCCc-----------ccCCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHH
Confidence 4556667777777766555532 22346789999999999999999999876 322222 12211 3455
Q ss_pred HHHHHHHcCCCCC---CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHH
Q 025730 135 RAALAKDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVEL 209 (249)
Q Consensus 135 r~~la~~~~~~~~---~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~ 209 (249)
++.+++++|++.+ +|++|+|+++++..+++++++|||.|+++.|+|+.|...++..|++++.++.+ ++|.+|++.
T Consensus 740 a~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~ 819 (1082)
T PLN02672 740 LQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKT 819 (1082)
T ss_pred HHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHH
Confidence 5666666677543 89999999999999999999999999999999999999999999999999964 468899999
Q ss_pred HHHhhccCCceEEEEcCCC-CccccCCChHHH--HHHHhhhhC
Q 025730 210 IADAVEREKPKCIFLTSPN-NPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 210 l~~~i~~~~~k~i~l~~Pn-NPTG~~~~~~e~--i~~i~~~~~ 249 (249)
+++++++.+.++|++|||| ||||.+++.+++ +..+|++||
T Consensus 820 Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~d 862 (1082)
T PLN02672 820 LASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYG 862 (1082)
T ss_pred HHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcC
Confidence 9999974345689999997 999999988865 566788765
No 84
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.88 E-value=3.3e-21 Score=176.69 Aligned_cols=154 Identities=23% Similarity=0.363 Sum_probs=131.9
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCCC-cChHHHHHHHHHHc----CC--CCCCEEEeCCHHHHHHHHHH
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~la~~~----~~--~~~~I~vt~Ga~~~l~~~~~ 164 (249)
+.++++|+.|.+++++++.+.+++.+ +. ...+|++ .|.++||+++++++ |+ ++++|++|+|+++++.+++.
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~ 111 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALM 111 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHH
Confidence 45789999999999989998888876 32 2357865 58899999999875 44 67899999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW-- 240 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~-- 240 (249)
+++++||+|++++|+|..|...+...|++++.++.+ +++.+|+++++++++ .++++|+++|||||||.+++.+++
T Consensus 112 ~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~ 190 (402)
T PRK06107 112 ATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELRA 190 (402)
T ss_pred HhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-cCceEEEEECCCCCCCcCcCHHHHHH
Confidence 999999999999999999998888899999888863 457799999999987 689999999999999999887754
Q ss_pred HHHHhhhh
Q 025730 241 IWGISSEH 248 (249)
Q Consensus 241 i~~i~~~~ 248 (249)
+.++|++|
T Consensus 191 l~~~a~~~ 198 (402)
T PRK06107 191 LADVLLRH 198 (402)
T ss_pred HHHHHHHc
Confidence 66678775
No 85
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=1.7e-21 Score=171.45 Aligned_cols=154 Identities=21% Similarity=0.342 Sum_probs=135.8
Q ss_pred CCeeeccCCCCC----CCCCHHHHHHHHh-cc--CCCCC-CCcChHHHHHHHHHHc------CCCCCCEEEeCCHHHHHH
Q 025730 95 EDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELID 160 (249)
Q Consensus 95 ~~~I~L~~~~~~----~~~p~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~l~ 160 (249)
+.+|.|+.|+|. |.+.+++.+|+.+ +. ..+.| |..|....|+++|+|+ .+++++|++|.|..++|+
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 478999999875 4567777788765 33 34789 7889999999999996 367899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEec--CCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 161 ~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~--~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
+++.++.+||..|++|.|+|+.|...+...|.++.+++ .+.+|.+|++.+++.++ ++|.++++.|||||+|.+|+.+
T Consensus 141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D-ENT~AivviNP~NPcGnVys~~ 219 (447)
T KOG0259|consen 141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD-ENTVAIVVINPNNPCGNVYSED 219 (447)
T ss_pred HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc-cCeeEEEEeCCCCCCcccccHH
Confidence 99999999999999999999999999999999999998 46789999999999998 7999999999999999999888
Q ss_pred H--HHHHHhhhhC
Q 025730 239 S--WIWGISSEHN 249 (249)
Q Consensus 239 e--~i~~i~~~~~ 249 (249)
. .+.++|+|++
T Consensus 220 HL~kiae~A~klg 232 (447)
T KOG0259|consen 220 HLKKIAETAKKLG 232 (447)
T ss_pred HHHHHHHHHHHhC
Confidence 4 4777888764
No 86
>PLN02231 alanine transaminase
Probab=99.88 E-value=1.5e-21 Score=184.84 Aligned_cols=154 Identities=17% Similarity=0.321 Sum_probs=124.3
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHhcc-----CCCCC-CCcChHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQLK-----FPYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLI 162 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~~~-----~~~~Y-p~~g~~~lr~~la~~~----~--~~~~~I~vt~Ga~~~l~~~ 162 (249)
+++|+|..+.+.|+. ..+.++...+. ....| +..|.++||+++|+++ | +++++|++|+|++++|.++
T Consensus 129 p~~i~~~~~~~~fp~-~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~ 207 (534)
T PLN02231 129 PSLLDKSETHGLFSA-DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMM 207 (534)
T ss_pred CccCCCCCccccCCH-HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHH
Confidence 456777765555643 33333333221 23568 4568999999999987 3 5789999999999999999
Q ss_pred HHHhcC-CCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--CCCCCHHHHHHhhccC-----CceEEEEcCCCCccccC
Q 025730 163 MRCVLD-PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 163 ~~~~~~-pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--~~~id~e~l~~~i~~~-----~~k~i~l~~PnNPTG~~ 234 (249)
++.++. +||.|+++.|+|..|...++..|++++.+++++ +|++|+++|++++++. ++|+|+++|||||||.+
T Consensus 208 ~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~v 287 (534)
T PLN02231 208 MQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQV 287 (534)
T ss_pred HHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcC
Confidence 999984 799999999999999999999999999999653 4899999999988631 68999999999999999
Q ss_pred CChHHH--HHHHhhhhC
Q 025730 235 SWTSSW--IWGISSEHN 249 (249)
Q Consensus 235 ~~~~e~--i~~i~~~~~ 249 (249)
++.+++ +.++|++||
T Consensus 288 ls~e~l~~Iv~~a~~~~ 304 (534)
T PLN02231 288 LAEENQRDIVEFCKQEG 304 (534)
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 998855 677888875
No 87
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.88 E-value=3.9e-21 Score=176.33 Aligned_cols=156 Identities=22% Similarity=0.374 Sum_probs=133.4
Q ss_pred CCCCeeeccCCCCC----CCCCHHHHHHHHh-cc--CCCCC-CCcChHHHHHHHHHHcC------CCCCCEEEeCCHHHH
Q 025730 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL 158 (249)
Q Consensus 93 ~~~~~I~L~~~~~~----~~~p~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~la~~~~------~~~~~I~vt~Ga~~~ 158 (249)
++.++|+|+.|++. +++++.+.+++.+ +. ....| +..|..++|++++++++ +++++|++|+|++++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 35689999999874 7788889888875 32 22568 56789999999999986 367899999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
+.+++.+++++||+|+++.|+|..|...++..|++++.++. ++++++|++.++++++ .++++++++|||||||.+++
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~ 187 (403)
T TIGR01265 109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD-EKTVAIVVINPSNPCGSVFS 187 (403)
T ss_pred HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC-cCccEEEEecCCCCCCCCCC
Confidence 99999999999999999999999999999999999999885 3457899999999887 68999999999999999998
Q ss_pred hHHH--HHHHhhhhC
Q 025730 237 TSSW--IWGISSEHN 249 (249)
Q Consensus 237 ~~e~--i~~i~~~~~ 249 (249)
.+++ +..+|+++|
T Consensus 188 ~~~~~~i~~~a~~~~ 202 (403)
T TIGR01265 188 RDHLQKIAEVARKLG 202 (403)
T ss_pred HHHHHHHHHHHHHCC
Confidence 6644 667788765
No 88
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.3e-21 Score=184.01 Aligned_cols=150 Identities=21% Similarity=0.243 Sum_probs=123.4
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHhccCCCCCCC-cChHHHHHHHHHHc------C-C-C--CCCEEEeCCHHHHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS------G-L-E--SDHILVGCGADELIDLIMR 164 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~-~g~~~lr~~la~~~------~-~-~--~~~I~vt~Ga~~~l~~~~~ 164 (249)
++|+|+.|++.+++|+.+.++...+. +..||. .|..+||+++++++ + . . .++|++|+|++++|..++.
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~ 179 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD 179 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 46999999999999999888665553 246965 58999999999843 1 1 2 2489999999999999988
Q ss_pred H-----hcCCCCeEEEcCCCChhHHHHHHHCC--CEEEEecC--CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCC
Q 025730 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFS 235 (249)
Q Consensus 165 ~-----~~~pGd~Vlv~~P~y~~~~~~~~~~G--~~v~~v~~--~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~ 235 (249)
+ +++|||+|++++|+|..|...++..| .+++.++. +++|.+|+++++++++ +++|+|+|+|||||||.++
T Consensus 180 aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~~tkai~l~nP~NPTG~v~ 258 (527)
T PRK09275 180 SLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-PSIKALFLVNPSNPPSVAM 258 (527)
T ss_pred HHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-CCCCEEEEeCCcCCcCCCC
Confidence 6 68999999999999999999988875 55566653 3468999999999887 7899999999999999999
Q ss_pred ChHHH--HHHHhhh
Q 025730 236 WTSSW--IWGISSE 247 (249)
Q Consensus 236 ~~~e~--i~~i~~~ 247 (249)
+.+++ +..+|++
T Consensus 259 s~e~l~~I~~ia~~ 272 (527)
T PRK09275 259 SDESLEKIADIVNE 272 (527)
T ss_pred CHHHHHHHHHHHHh
Confidence 88855 5567754
No 89
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.87 E-value=3e-21 Score=177.20 Aligned_cols=155 Identities=16% Similarity=0.161 Sum_probs=123.7
Q ss_pred CCeeeccCCCC-CCCCCHH----HHHHHHhc---cCCCCC-CCcChHHHHHHHHHHc---C---CCCCCEE--EeCCHHH
Q 025730 95 EDIVKIDANEN-PYGPPPE----VREALGQL---KFPYIY-PDPESRRLRAALAKDS---G---LESDHIL--VGCGADE 157 (249)
Q Consensus 95 ~~~I~L~~~~~-~~~~p~~----v~~al~~~---~~~~~Y-p~~g~~~lr~~la~~~---~---~~~~~I~--vt~Ga~~ 157 (249)
+++|+|+.|.+ ++.++.. +.+++..+ .....| |..|.++||+++++++ + +++++|+ .|.|+++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 57799999986 3555443 34444331 123678 4579999999999986 2 4778888 5899999
Q ss_pred HHHHHHH---HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC-C-CCCCCCHHHHHHhhcc--CCceEEEEcCCCCc
Q 025730 158 LIDLIMR---CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER--EKPKCIFLTSPNNP 230 (249)
Q Consensus 158 ~l~~~~~---~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~-~-~~~~id~e~l~~~i~~--~~~k~i~l~~PnNP 230 (249)
++.+++. .+++|||+|++++|+|..|...++..|++++.++. + +++++|++.+++++++ .++++++++|||||
T Consensus 109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NP 188 (404)
T PTZ00376 109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNP 188 (404)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9988875 66899999999999999999999999999999997 2 4589999999999853 34677778999999
Q ss_pred cccCCChHHH--HHHHhhhhC
Q 025730 231 DGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 231 TG~~~~~~e~--i~~i~~~~~ 249 (249)
||.+++.+++ +.++|++||
T Consensus 189 TG~~~s~~~~~~l~~~a~~~~ 209 (404)
T PTZ00376 189 TGVDPTEEQWKEIADVMKRKN 209 (404)
T ss_pred CCCCCCHHHHHHHHHHHHhCC
Confidence 9999998865 566888875
No 90
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=1.3e-21 Score=181.89 Aligned_cols=156 Identities=21% Similarity=0.349 Sum_probs=126.6
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-cc-------------CCCCCCC-cChHHHHHHHHHHcC--------CCCCCE
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-------------FPYIYPD-PESRRLRAALAKDSG--------LESDHI 149 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~-------------~~~~Yp~-~g~~~lr~~la~~~~--------~~~~~I 149 (249)
++.++|+|+..||.+ .-+.+.+.+.. .. ....|.+ .|..+||+++|++++ +++++|
T Consensus 45 np~g~i~l~~aeN~l-~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I 123 (447)
T PLN02607 45 NPSGVIQMGLAENQV-SFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI 123 (447)
T ss_pred CCCceEEEechhhhh-hHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence 456799999999976 34555555543 11 1133544 488999999999973 678999
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHH-HCCCEEEEecCC--CCCCCCHHHHHHhhcc-----CCceE
Q 025730 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKC 221 (249)
Q Consensus 150 ~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~-~~G~~v~~v~~~--~~~~id~e~l~~~i~~-----~~~k~ 221 (249)
++|+|+++++++++.++++|||.|+++.|+|+.|...+. ..|++++.|+.+ ++|.+|++++++++++ .++|+
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~ 203 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRG 203 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence 999999999999999999999999999999999988776 479999999864 4577999999998863 47899
Q ss_pred EEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 222 IFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 222 i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
|++||||||||.+++.+++ +..+|++||
T Consensus 204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~ 233 (447)
T PLN02607 204 VLITNPSNPLGATVQRSVLEDILDFVVRKN 233 (447)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCC
Confidence 9999999999999998855 556787765
No 91
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.87 E-value=3.2e-21 Score=174.13 Aligned_cols=154 Identities=27% Similarity=0.376 Sum_probs=125.5
Q ss_pred HHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCC-cChHHHHHHHHHHc-------CCCCCCEEEeCCHH
Q 025730 85 VLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS-------GLESDHILVGCGAD 156 (249)
Q Consensus 85 ~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~-~g~~~lr~~la~~~-------~~~~~~I~vt~Ga~ 156 (249)
..+.+....+.++++|+.|++..++++.+.+++.+......|++ .|..+||+++++++ ++++++|++|+|++
T Consensus 11 ~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~ 90 (357)
T TIGR03539 11 PYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTK 90 (357)
T ss_pred HHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChH
Confidence 34444445567789999998888888888888876433467875 47899999999997 47789999999999
Q ss_pred HHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCC
Q 025730 157 ELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFS 235 (249)
Q Consensus 157 ~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~ 235 (249)
+++..++..+ +++||.|++++|+|..|...++..|++++.++ |++.+. ..++++|+++|||||||.++
T Consensus 91 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l~----~~~~~~v~~~~p~NPtG~~~ 159 (357)
T TIGR03539 91 ELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTELD----PVGPDLIWLNSPGNPTGRVL 159 (357)
T ss_pred HHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------ChhhcC----ccCccEEEEeCCCCCcCccC
Confidence 9999999887 79999999999999999999999999998874 233332 25789999999999999999
Q ss_pred ChHHH--HHHHhhhhC
Q 025730 236 WTSSW--IWGISSEHN 249 (249)
Q Consensus 236 ~~~e~--i~~i~~~~~ 249 (249)
+.+++ +.++|++||
T Consensus 160 ~~~~~~~i~~~a~~~~ 175 (357)
T TIGR03539 160 SVDELRAIVAWARERG 175 (357)
T ss_pred CHHHHHHHHHHHHHcC
Confidence 87754 667888875
No 92
>PRK08354 putative aminotransferase; Provisional
Probab=99.87 E-value=4.6e-21 Score=170.07 Aligned_cols=142 Identities=25% Similarity=0.368 Sum_probs=118.0
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd 171 (249)
.+.++|+|+.|+|+++ |+.+.+++.+ +.....||. ...||++++++++ ++|++|+|++++|.+++..+ .+||
T Consensus 6 ~~~~~i~l~~~~np~~-p~~~~~a~~~~~~~~~~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~~~-~~gd 78 (311)
T PRK08354 6 REEGLIDFSASVNPYP-PEWLDEMFERAKEISGRYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLIGILA-LRDR 78 (311)
T ss_pred CccceeEecCCCCCCC-CHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHHHHhh-CCCC
Confidence 4567899999999996 5788888865 333457875 5789999999998 47999999999999888644 5899
Q ss_pred eEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 172 ~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
+|++++|+|..|...++..|++++.++ +|++.+++.++ +++++++||||||||.+++.+++ +..+|+++|
T Consensus 79 ~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~--~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~ 150 (311)
T PRK08354 79 KVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVE--RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRN 150 (311)
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhc--CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcC
Confidence 999999999999999999999998763 57899988875 46789999999999999988765 445676654
No 93
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.86 E-value=5.9e-21 Score=170.77 Aligned_cols=151 Identities=17% Similarity=0.183 Sum_probs=117.6
Q ss_pred CCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHH
Q 025730 80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI 159 (249)
Q Consensus 80 ~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l 159 (249)
+..+...+...|....++|+|+.|++|+++|+..... .. ...||+.. .+||++++++++ +++|++|+|++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~i~l~~ne~p~~~~~~~~~~-~~---~~~yp~~~-~~Lr~~ia~~~~--~~~I~it~Gs~~al 77 (330)
T PRK05664 5 GGRLRRAAQRYGIPLADWLDLSTGIAPWPWPVPAIPA-DA---WARLPETD-DGLEAAARAYYG--APQLLPVAGSQAAI 77 (330)
T ss_pred CchHHHHHHHcCCCHHHheeecCCcCCCCCCCcccCH-HH---HHhCCCCh-HHHHHHHHHHhC--CCCEEECcCHHHHH
Confidence 4445556666666556789999999999877321111 11 14588754 899999999999 47999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
.+++. +.+||+|++++|+|..|...++..|++++.++.+ +++++++ +++++++||||||||.+++.++
T Consensus 78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~ 145 (330)
T PRK05664 78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA--------EVEAALD--SLDVLVVVNPNNPTGRRFDPAR 145 (330)
T ss_pred HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh--------hHhhhhc--CCCEEEEeCCcCCCCCccCHHH
Confidence 99864 5799999999999999999999999999999752 3555553 6789999999999999998886
Q ss_pred HHH--HHhhhhC
Q 025730 240 WIW--GISSEHN 249 (249)
Q Consensus 240 ~i~--~i~~~~~ 249 (249)
+.+ .+|+++|
T Consensus 146 l~~l~~~~~~~~ 157 (330)
T PRK05664 146 LLAWHARLAARG 157 (330)
T ss_pred HHHHHHHHHhcC
Confidence 643 4456553
No 94
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=8.6e-22 Score=165.97 Aligned_cols=171 Identities=55% Similarity=0.896 Sum_probs=151.9
Q ss_pred CCChHHHHHhhccCCCCCCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHH
Q 025730 62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKD 141 (249)
Q Consensus 62 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~ 141 (249)
...++++++..+...|+++..++.....+|+ +++.|+.++++..|+|+. +...+.||+....+++.++++-
T Consensus 11 ~~i~~l~Pyrcarddf~eg~lldane~a~G~---~iv~ld~~e~~ryPdP~q------~efk~~~~d~rnk~ls~a~~~d 81 (375)
T KOG0633|consen 11 MGISFLRPYRCARDDFQEGLLLDANEAALGR---DIVKLDANENPRYPDPEQ------MEFKYVYPDPRNKRLSDALAQD 81 (375)
T ss_pred ccccccChhhhhhhhccccceecchhhhcCC---CceEeccccCCCCcCHHH------cccccccCCcccchhhhhcccC
Confidence 3567788888888889888888888888876 789999999998777754 4455788988889999999998
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-CCc
Q 025730 142 SGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKP 219 (249)
Q Consensus 142 ~~~~~~~I~vt~Ga~~~l~~~~~~~~~pG-d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-~~~ 219 (249)
-++.+|+|.++.|++|.|++++++.|.|| ++|++..|+|.+|...+...+++++.+|.+.+|.+|.|++.+.++. .++
T Consensus 82 kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~i 161 (375)
T KOG0633|consen 82 KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKI 161 (375)
T ss_pred CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccc
Confidence 88999999999999999999999999999 9999999999999999999999999999999999999999999874 479
Q ss_pred eEEEEcCCCCccccCCChHHHH
Q 025730 220 KCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 220 k~i~l~~PnNPTG~~~~~~e~i 241 (249)
|++|+|+|+||||..+..+++.
T Consensus 162 K~~F~tSPgNPtg~~ik~~di~ 183 (375)
T KOG0633|consen 162 KCIFLTSPGNPTGSIIKEDDIL 183 (375)
T ss_pred eEEEEcCCCCCCcccccHHHHH
Confidence 9999999999999997655543
No 95
>PRK07777 aminotransferase; Validated
Probab=99.86 E-value=3.1e-20 Score=169.24 Aligned_cols=154 Identities=30% Similarity=0.482 Sum_probs=129.4
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc-CCCCCCC-cChHHHHHHHHHHc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR 164 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~la~~~----~~--~~~-~I~vt~Ga~~~l~~~~~ 164 (249)
.++++|+.|.++.+.++.+.+++.+ +. ...+|++ .|..+||+++++++ |+ +++ +|++|+|+++++.+++.
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 103 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL 103 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence 4679999999988887777777665 32 2356864 57999999999874 54 455 79999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC---CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH-
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW- 240 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~---~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~- 240 (249)
+++++||+|+++.|+|..|...++..|.+++.++.++ ++.+|+++++++++ .++++|+++|||||||.+++.+++
T Consensus 104 ~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~ 182 (387)
T PRK07777 104 GLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-PRTRALIVNSPHNPTGTVLTAAELA 182 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-cccEEEEEcCCCCCCCccCCHHHHH
Confidence 9999999999999999999999999999999998643 46799999999987 689999999999999999987644
Q ss_pred -HHHHhhhhC
Q 025730 241 -IWGISSEHN 249 (249)
Q Consensus 241 -i~~i~~~~~ 249 (249)
+..+|++||
T Consensus 183 ~l~~~~~~~~ 192 (387)
T PRK07777 183 AIAELAVEHD 192 (387)
T ss_pred HHHHHHHhcC
Confidence 667888764
No 96
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.86 E-value=1.1e-20 Score=168.97 Aligned_cols=156 Identities=31% Similarity=0.444 Sum_probs=131.6
Q ss_pred CCCcHHHHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHH
Q 025730 79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158 (249)
Q Consensus 79 ~~~~~~~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~ 158 (249)
++++++..++++|.+.+++++|+.|+|++++| ..+.. .....+||++..++||+++++++++++++|++|+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~ 76 (330)
T TIGR01140 1 HGGNLRRAAARYGIPPEDWLDFSTGINPLGPP--VPPIP--ASAWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEA 76 (330)
T ss_pred CCccHHHHHHHcCCChhheeEccccCCCCCCC--hhhcc--hHHHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHH
Confidence 46788999999999999999999999999876 22211 122367887667999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
+..++.. +.+| +|++++|+|..|...++..|.+++.++ |++.+++.++ ++++|++++||||||.+++.+
T Consensus 77 i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~ 145 (330)
T TIGR01140 77 IYLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPE 145 (330)
T ss_pred HHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHH
Confidence 9998765 5777 799999999999999999999999987 7899999884 578999999999999998877
Q ss_pred HH--HHHHhhhhC
Q 025730 239 SW--IWGISSEHN 249 (249)
Q Consensus 239 e~--i~~i~~~~~ 249 (249)
++ +.++|++||
T Consensus 146 ~~~~l~~~a~~~~ 158 (330)
T TIGR01140 146 TLLALAARLRARG 158 (330)
T ss_pred HHHHHHHHhHhcC
Confidence 55 556777764
No 97
>PRK08175 aminotransferase; Validated
Probab=99.86 E-value=3.4e-20 Score=169.55 Aligned_cols=156 Identities=22% Similarity=0.348 Sum_probs=127.9
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC-cChHHHHHHHHHHc----C--CCCC-CEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~la~~~----~--~~~~-~I~vt~Ga~~~l~~ 161 (249)
.+.++++|+.+.++..+++.+.+++.+ +. ....|++ .|.++||+++++++ | ++++ +|++|+|+++++.+
T Consensus 27 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~ 106 (395)
T PRK08175 27 RGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAH 106 (395)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHH
Confidence 346789999998888778777777654 22 2367864 58999999999986 3 4566 79999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc--CCceEEEEcCCCCccccCCChHH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~--~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
++..+++|||+|++++|+|..+...++..|++++.++.+.+ ..++++++++++. .++++|++++||||||.+++.++
T Consensus 107 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~ 185 (395)
T PRK08175 107 LMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG-VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEF 185 (395)
T ss_pred HHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC-CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHH
Confidence 99999999999999999999998888899999999997543 3357888887763 37899999999999999998874
Q ss_pred H--HHHHhhhhC
Q 025730 240 W--IWGISSEHN 249 (249)
Q Consensus 240 ~--i~~i~~~~~ 249 (249)
+ +.++|++||
T Consensus 186 ~~~i~~~a~~~~ 197 (395)
T PRK08175 186 FEKVVALAKRYD 197 (395)
T ss_pred HHHHHHHHHHcC
Confidence 4 667888775
No 98
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.86 E-value=1.4e-20 Score=170.28 Aligned_cols=154 Identities=27% Similarity=0.410 Sum_probs=123.1
Q ss_pred HHHHHhCCCCCCeeeccCCCCCCCCCHHHHHHHHhccCCCCCCC-cChHHHHHHHHHHc----C---CCCCCEEEeCCHH
Q 025730 85 VLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS----G---LESDHILVGCGAD 156 (249)
Q Consensus 85 ~~~~~~g~~~~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~-~g~~~lr~~la~~~----~---~~~~~I~vt~Ga~ 156 (249)
.++......+.++++|+.|++..+.++.+.+++.+.....+|++ .|.++||+++++++ | +++++|++|+|++
T Consensus 17 ~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~ 96 (364)
T PRK07865 17 PAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSK 96 (364)
T ss_pred HHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChH
Confidence 33333333445789999998877777888888876333357865 57899999999997 3 6689999999999
Q ss_pred HHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCC
Q 025730 157 ELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFS 235 (249)
Q Consensus 157 ~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~ 235 (249)
++|.+++..+ +++||.|++++|+|..|...++..|++++.++. ++++.. .++++|+++|||||||.++
T Consensus 97 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------~~~l~~----~~~~~v~~~~p~NPtG~~~ 165 (364)
T PRK07865 97 ELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------LTELGP----QRPALIWLNSPSNPTGRVL 165 (364)
T ss_pred HHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC-------hhhCCc----ccceEEEEcCCCCCCCccC
Confidence 9999998888 799999999999999999999999999998852 233322 5789999999999999999
Q ss_pred ChHHH--HHHHhhhhC
Q 025730 236 WTSSW--IWGISSEHN 249 (249)
Q Consensus 236 ~~~e~--i~~i~~~~~ 249 (249)
+.+++ +..+|++||
T Consensus 166 ~~~~~~~i~~~a~~~~ 181 (364)
T PRK07865 166 GVDHLRKVVAWARERG 181 (364)
T ss_pred CHHHHHHHHHHHHHcC
Confidence 88754 566777765
No 99
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.85 E-value=2.7e-20 Score=173.36 Aligned_cols=166 Identities=15% Similarity=0.161 Sum_probs=137.8
Q ss_pred CcHHHHHHHhCCCCCCeeeccCCCC--CCCCCH---HHHHHHHh-ccC-CCCC-CCcChHHHHHHHHHHcCCCCCCEEEe
Q 025730 81 LPFEVLSIQLGRKPEDIVKIDANEN--PYGPPP---EVREALGQ-LKF-PYIY-PDPESRRLRAALAKDSGLESDHILVG 152 (249)
Q Consensus 81 ~~~~~~~~~~g~~~~~~I~L~~~~~--~~~~p~---~v~~al~~-~~~-~~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt 152 (249)
......+..+...+.++|+|+.+++ ++.++. .+.+++.+ +.. ...| +..+..+||++++++++. ++|++|
T Consensus 22 ~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~--~~vv~t 99 (460)
T PRK13238 22 TTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY--PYTIPT 99 (460)
T ss_pred cCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC--CcEEEC
Confidence 4566666666666779999999998 687765 45555543 322 3578 567899999999999984 689999
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC--------CCC--CCHHHHHHhhcc---CCc
Q 025730 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--------DFS--LNVELIADAVER---EKP 219 (249)
Q Consensus 153 ~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~--------~~~--id~e~l~~~i~~---~~~ 219 (249)
+|+++++.+++.++++||| |++++|.|..|...++..|++++.++.+. +|. +|+++|++.++. +++
T Consensus 100 ~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~t 178 (460)
T PRK13238 100 HQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENV 178 (460)
T ss_pred CCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCce
Confidence 9999999999999999999 99999999999998999999999998642 344 999999999974 369
Q ss_pred eEEEEcCCCCccc-cCCChH--HHHHHHhhhhC
Q 025730 220 KCIFLTSPNNPDG-RFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 220 k~i~l~~PnNPTG-~~~~~~--e~i~~i~~~~~ 249 (249)
++|++++|||||| .+++.+ +.+.++|++||
T Consensus 179 k~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~g 211 (460)
T PRK13238 179 PFIVMTITNNSAGGQPVSMANLRAVYEIAKKYG 211 (460)
T ss_pred eEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 9999999999998 888776 46888999986
No 100
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.85 E-value=2.7e-20 Score=174.89 Aligned_cols=151 Identities=18% Similarity=0.215 Sum_probs=118.4
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHhccCCCCCCC-cChHHHHHHHH-HHc----C---CCCC--CEEEeCCHHHHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALA-KDS----G---LESD--HILVGCGADELIDLIMR 164 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~-~g~~~lr~~la-~~~----~---~~~~--~I~vt~Ga~~~l~~~~~ 164 (249)
++|+|+.+++.+++++.+.+...... +..||. .+..+++++++ +++ + .+++ +|++|+|++++|..++.
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~ 173 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD 173 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 46999999999987666544444432 246853 46666666666 453 1 2333 89999999999999988
Q ss_pred H-----hcCCCCeEEEcCCCChhHHHHHHHC--CCEEEEecCCC--C-----CCCCHHHHHHhhccCCceEEEEcCCCCc
Q 025730 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKS--D-----FSLNVELIADAVEREKPKCIFLTSPNNP 230 (249)
Q Consensus 165 ~-----~~~pGd~Vlv~~P~y~~~~~~~~~~--G~~v~~v~~~~--~-----~~id~e~l~~~i~~~~~k~i~l~~PnNP 230 (249)
+ +++|||+|++++|+|+.|...++.. |++++.++.+. + |.+|+++++++++ +++|+|+|+|||||
T Consensus 174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-~~~kai~l~nP~NP 252 (521)
T TIGR03801 174 SLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-PSIKALFVVNPSNP 252 (521)
T ss_pred HHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC-CCCcEEEEeCCCCC
Confidence 7 7899999999999999999988775 78888887532 2 8899999999877 78999999999999
Q ss_pred cccCCChHHH--HHHHhhhh
Q 025730 231 DGRFSWTSSW--IWGISSEH 248 (249)
Q Consensus 231 TG~~~~~~e~--i~~i~~~~ 248 (249)
||.+++.+++ +..+|++|
T Consensus 253 TG~vls~e~l~~I~~ia~~~ 272 (521)
T TIGR03801 253 PSVAMSDESIEKIVDIVAND 272 (521)
T ss_pred CCCCCCHHHHHHHHHHHHhc
Confidence 9999998855 56678775
No 101
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=3.1e-20 Score=167.23 Aligned_cols=154 Identities=30% Similarity=0.512 Sum_probs=129.0
Q ss_pred CeeeccCCCCCCC----CCHHHHHHHHh----ccCCCCCCCc-ChHHHHHHHHHHcC------CCCC-CEEEeCCHHHHH
Q 025730 96 DIVKIDANENPYG----PPPEVREALGQ----LKFPYIYPDP-ESRRLRAALAKDSG------LESD-HILVGCGADELI 159 (249)
Q Consensus 96 ~~I~L~~~~~~~~----~p~~v~~al~~----~~~~~~Yp~~-g~~~lr~~la~~~~------~~~~-~I~vt~Ga~~~l 159 (249)
++|+|+.|++++. +++.+.+++.+ ......|++. |.++||++++++++ ++++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5899999999987 55666666543 2334789654 69999999999997 7888 999999999999
Q ss_pred HHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhccC-----CceEEEEcCCCCcc
Q 025730 160 DLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE-----KPKCIFLTSPNNPD 231 (249)
Q Consensus 160 ~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~~-----~~k~i~l~~PnNPT 231 (249)
..++..+ .++||+|++++|+|..|...++..|.+++.++. ..++.+|++++++.+++. ++++|++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999998 889999999999999999999999999999993 467899999999999842 57899999999999
Q ss_pred ccCCChHHH--HHHHhhhhC
Q 025730 232 GRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 232 G~~~~~~e~--i~~i~~~~~ 249 (249)
|.+++.+++ +..+|++||
T Consensus 162 G~~~~~~~l~~l~~~~~~~~ 181 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYN 181 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTT
T ss_pred ccccccccccchhhhhcccc
Confidence 999887755 455687764
No 102
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.82 E-value=2e-19 Score=165.50 Aligned_cols=152 Identities=16% Similarity=0.240 Sum_probs=115.0
Q ss_pred CCeeeccCCCCCCCCC--HHHHHHHHh-cc------CCCCCCC-cChHHHHHHHHHHc------CCCCCCEEEeCCHHHH
Q 025730 95 EDIVKIDANENPYGPP--PEVREALGQ-LK------FPYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADEL 158 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p--~~v~~al~~-~~------~~~~Yp~-~g~~~lr~~la~~~------~~~~~~I~vt~Ga~~~ 158 (249)
+++|+|+.+.++..++ +.+.+++.. +. ....|++ .|..+||+++++++ ++++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 5679999998875443 345566554 22 1247976 47899999999997 3788999999999999
Q ss_pred HHHHHHHhcC-----CCCeEEE-cCCCChhHHHHHHHCCC------EEEEecCCC-CCCCCHHHHHHhhccCCceEEEEc
Q 025730 159 IDLIMRCVLD-----PGDKIVD-CPPTFTMYEFDAAVNGA------AVVKVPRKS-DFSLNVELIADAVEREKPKCIFLT 225 (249)
Q Consensus 159 l~~~~~~~~~-----pGd~Vlv-~~P~y~~~~~~~~~~G~------~v~~v~~~~-~~~id~e~l~~~i~~~~~k~i~l~ 225 (249)
|.++++++++ +||.|++ ++|+|+.|...+...|. .++.++.+. ++++|+++++ +. .+++++++|
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~i~l~ 186 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-EDTGAICVS 186 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-CCceEEEEe
Confidence 9999999985 6899999 79999999886654332 222232211 3689999997 34 678999999
Q ss_pred CCCCccccCCChHHH--HHHHhhhhC
Q 025730 226 SPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 226 ~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
|||||||.+++.+++ +.++|++||
T Consensus 187 ~P~NPTG~~~s~~~~~~l~~~a~~~~ 212 (416)
T PRK09440 187 RPTNPTGNVLTDEELEKLDALARQHN 212 (416)
T ss_pred cCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 999999999998855 556787765
No 103
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.80 E-value=1.3e-18 Score=162.33 Aligned_cols=154 Identities=25% Similarity=0.407 Sum_probs=126.3
Q ss_pred CCeeeccCCCCCCC--CCHHHHHHHHh-c---c-C-CCCCC-CcChHHHHHHHHHHc----C--CCCCCEEEeCCHHHHH
Q 025730 95 EDIVKIDANENPYG--PPPEVREALGQ-L---K-F-PYIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADELI 159 (249)
Q Consensus 95 ~~~I~L~~~~~~~~--~p~~v~~al~~-~---~-~-~~~Yp-~~g~~~lr~~la~~~----~--~~~~~I~vt~Ga~~~l 159 (249)
+.+++|+.+.++.. +-....+++.. . . . ...|. ..|..+||+++++++ | +++++|++|+|++++|
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 67799988875542 22334444433 1 1 1 24564 478999999999997 3 5778999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEc-CCCCccccCCChH
Q 025730 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGRFSWTS 238 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~-~PnNPTG~~~~~~ 238 (249)
+++++.+++|||+|++++|+|......++.+|++++.||.+ +.++|+|++++.+.+.++|++|++ +-|||||.+++.+
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d-~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~ 247 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD-EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLE 247 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC-CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHH
Confidence 99999999999999999999999999999999999999996 568999999999987789999966 6689999999998
Q ss_pred HH--HHHHhhhhC
Q 025730 239 SW--IWGISSEHN 249 (249)
Q Consensus 239 e~--i~~i~~~~~ 249 (249)
+. +..+|++||
T Consensus 248 rR~~Ll~lA~~~~ 260 (459)
T COG1167 248 RRKALLALAEKYD 260 (459)
T ss_pred HHHHHHHHHHHcC
Confidence 54 667788775
No 104
>PLN02397 aspartate transaminase
Probab=99.80 E-value=1.7e-18 Score=160.03 Aligned_cols=155 Identities=17% Similarity=0.191 Sum_probs=111.8
Q ss_pred CCCeeeccCCC-CCCCCCH----HHHHHHHhc-c--CCCCC-CCcChHHHHHHHHHHc-CC-----CCCCE-----EEeC
Q 025730 94 PEDIVKIDANE-NPYGPPP----EVREALGQL-K--FPYIY-PDPESRRLRAALAKDS-GL-----ESDHI-----LVGC 153 (249)
Q Consensus 94 ~~~~I~L~~~~-~~~~~p~----~v~~al~~~-~--~~~~Y-p~~g~~~lr~~la~~~-~~-----~~~~I-----~vt~ 153 (249)
....|+|+.+. ++...++ .+.+++..+ . ....| |..|.++||+++++++ +. ++++| +.|+
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~ 126 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT 126 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence 34568888885 3443333 455554332 2 22468 5579999999999987 22 12333 3445
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhcc--CCceEEEEcCCCC
Q 025730 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNN 229 (249)
Q Consensus 154 Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~--~~~k~i~l~~PnN 229 (249)
|+.+ +...+..++.|||+|++++|+|+.|...++..|++++.++. .+++++|++.+++.+.+ .+++++++++|||
T Consensus 127 Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N 205 (423)
T PLN02397 127 GSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN 205 (423)
T ss_pred HHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 5543 33344445579999999999999999999999999999986 24589999999887752 4678898999999
Q ss_pred ccccCCChHHH--HHHHhhhhC
Q 025730 230 PDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 230 PTG~~~~~~e~--i~~i~~~~~ 249 (249)
|||.+++.+++ +..+|++||
T Consensus 206 PTG~v~s~e~l~~i~~~a~~~~ 227 (423)
T PLN02397 206 PTGVDPTPEQWEQISDLIKSKN 227 (423)
T ss_pred CCCCCCCHHHHHHHHHHHHhCC
Confidence 99999998865 567788765
No 105
>PRK08637 hypothetical protein; Provisional
Probab=99.80 E-value=1.7e-18 Score=158.14 Aligned_cols=136 Identities=18% Similarity=0.256 Sum_probs=107.1
Q ss_pred HHHHHHHHhc--cCCCCCC-CcChHHHHHHHHHHc-----CCCC---CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 025730 111 PEVREALGQL--KFPYIYP-DPESRRLRAALAKDS-----GLES---DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (249)
Q Consensus 111 ~~v~~al~~~--~~~~~Yp-~~g~~~lr~~la~~~-----~~~~---~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~ 179 (249)
+.+.+++.+. .....|+ ..|.++||+++++++ .+.+ ++|++|+|++++|.+++.++++|||+|++++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~ 102 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHN 102 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 3444444442 2336785 468999999999886 2332 578999999999999999999999999999999
Q ss_pred ChhHHHHHH-HCCCEEEEecCC-CCCCCCHHHHHHhhc---cCCceEEEEcCCCCccccCCChHHH--HHHHhh
Q 025730 180 FTMYEFDAA-VNGAAVVKVPRK-SDFSLNVELIADAVE---REKPKCIFLTSPNNPDGRFSWTSSW--IWGISS 246 (249)
Q Consensus 180 y~~~~~~~~-~~G~~v~~v~~~-~~~~id~e~l~~~i~---~~~~k~i~l~~PnNPTG~~~~~~e~--i~~i~~ 246 (249)
|+.|...+. ..|++++.++.. +++++|+++++++++ +...++++++|||||||.+++.+++ +..+|+
T Consensus 103 y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~ 176 (388)
T PRK08637 103 WGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIK 176 (388)
T ss_pred CccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999998754 589999999973 567899999999875 2345667788999999999988865 444554
No 106
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.77 E-value=3.2e-17 Score=150.04 Aligned_cols=152 Identities=21% Similarity=0.277 Sum_probs=123.2
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCC-----------cChHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~la~~~~~-~~~~I~vt~Ga~~~l~~ 161 (249)
++.+.|+.+.... .|..+.+++.. +......+. ...+++|+.+++++|+ ++++|++|+|+++++.+
T Consensus 18 ~~~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~ 96 (401)
T PRK10874 18 DAGVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL 96 (401)
T ss_pred CceEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence 3468999887764 66788888865 321111111 1256899999999998 78999999999999999
Q ss_pred HHHHh----cCCCCeEEEcCCCCh----hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 162 IMRCV----LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 162 ~~~~~----~~pGd~Vlv~~P~y~----~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
+++++ +++||+|++++|+|. .|...++..|++++.++.+.++.+|+++++++++ +++++|++++||||||.
T Consensus 97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~i~~~~n~tG~ 175 (401)
T PRK10874 97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-PRTRILALGQMSNVTGG 175 (401)
T ss_pred HHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-cCcEEEEEeCCcccccC
Confidence 99987 479999999999985 4566678899999999987778899999999997 78999999999999999
Q ss_pred CCChHHHHHHHhhhhC
Q 025730 234 FSWTSSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~i~~i~~~~~ 249 (249)
++ +.+.+..+|+++|
T Consensus 176 ~~-~~~~i~~l~~~~g 190 (401)
T PRK10874 176 CP-DLARAITLAHQAG 190 (401)
T ss_pred cC-CHHHHHHHHHHcC
Confidence 96 5567777888875
No 107
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.76 E-value=3.9e-17 Score=149.35 Aligned_cols=151 Identities=19% Similarity=0.266 Sum_probs=121.6
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHh-ccC--CC-CC-CC-------cChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQ-LKF--PY-IY-PD-------PESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~-~~~--~~-~Y-p~-------~g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~ 162 (249)
+.+.|+.+... +.|+.+.+++.+ +.. .. .+ +. ...+++|+.+++++|.+ +++|++|+|+++++.++
T Consensus 16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~ 94 (398)
T TIGR03392 16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV 94 (398)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence 57899988766 366788888765 221 11 11 11 12457999999999984 78999999999999999
Q ss_pred HHHh----cCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 163 ~~~~----~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
+.++ +++||+|++++|+|.. |...++..|++++.++.+.++.+|+++++++++ +++++|++++||||||.+
T Consensus 95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~~ 173 (398)
T TIGR03392 95 AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT-PRTRILALGQMSNVTGGC 173 (398)
T ss_pred HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEECcccccccc
Confidence 9987 5799999999999853 556678899999999987777899999999997 689999999999999999
Q ss_pred CChHHHHHHHhhhhC
Q 025730 235 SWTSSWIWGISSEHN 249 (249)
Q Consensus 235 ~~~~e~i~~i~~~~~ 249 (249)
+ +.+.+..+|+++|
T Consensus 174 ~-~~~~i~~~~~~~~ 187 (398)
T TIGR03392 174 P-DLARAITLAHQYG 187 (398)
T ss_pred C-CHHHHHHHHHHcC
Confidence 6 4566778888875
No 108
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.75 E-value=5.8e-17 Score=149.67 Aligned_cols=154 Identities=14% Similarity=0.158 Sum_probs=124.0
Q ss_pred CCCCeeeccCCCC--CCCCCH---HHHHHHH-hccC-CCCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANEN--PYGPPP---EVREALG-QLKF-PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~~--~~~~p~---~v~~al~-~~~~-~~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+.+++.|..++. ++.++. .+.++.. .+.. ...| ++.+..+|++++++++|. +++++|+|+++++.+++.
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g~--~~vv~t~~Gt~Al~la~~ 86 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFGF--KHIIPTHQGRGAENILFS 86 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHHHH
Confidence 4457889999888 665542 3333322 2222 2458 567899999999999995 589999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC----------CCCCCHHHHHHhhccC---CceEEEEcCCCCcc
Q 025730 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNNPD 231 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~----------~~~id~e~l~~~i~~~---~~k~i~l~~PnNPT 231 (249)
++++|||.| +++|+|..|...+...|++++.++.+. .+.+|+++|++++++. ++++|++++||||+
T Consensus 87 al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~ 165 (431)
T cd00617 87 ILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTA 165 (431)
T ss_pred HhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCC
Confidence 999999988 689999999999999999999999642 2449999999999842 37899999999998
Q ss_pred -ccCCChHH--HHHHHhhhhC
Q 025730 232 -GRFSWTSS--WIWGISSEHN 249 (249)
Q Consensus 232 -G~~~~~~e--~i~~i~~~~~ 249 (249)
|.+++.++ .+.++|++||
T Consensus 166 gG~~~s~~~l~~i~eia~~~g 186 (431)
T cd00617 166 GGQPVSMANLREVRELAHKYG 186 (431)
T ss_pred CCccCCHHHHHHHHHHHHHcC
Confidence 89987774 5789999986
No 109
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.74 E-value=4.5e-17 Score=147.43 Aligned_cols=150 Identities=21% Similarity=0.240 Sum_probs=122.3
Q ss_pred eeccCCCCCCCCCHHHHHHHHh-ccCC------CCCCC-----cChHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHH
Q 025730 98 VKIDANENPYGPPPEVREALGQ-LKFP------YIYPD-----PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMR 164 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~-~~~~------~~Yp~-----~g~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~~~~~ 164 (249)
+.|+.+.+++++|+.+.+++.+ +... ..|+. ....++|+.++++++.+. ++|++|+|+++++.+++.
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~ 80 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK 80 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 3578888888899999888865 2211 12432 346789999999999854 489999999999999999
Q ss_pred HhcCCCCeEEEcCCCChhHH----HHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH
Q 025730 165 CVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW 240 (249)
Q Consensus 165 ~~~~pGd~Vlv~~P~y~~~~----~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~ 240 (249)
+++++||+|++..++|..+. ..++..|.+++.++.+.++.+|+++++++++ +++++|++++||||||.+++ .+.
T Consensus 81 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~n~tG~~~~-~~~ 158 (376)
T TIGR01977 81 GLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-TNTKLIVVSHASNVTGTILP-IEE 158 (376)
T ss_pred hccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-CCCeEEEEECCCCCccccCC-HHH
Confidence 99999999999999987543 4556679999999977778899999999997 68999999999999999975 556
Q ss_pred HHHHhhhhC
Q 025730 241 IWGISSEHN 249 (249)
Q Consensus 241 i~~i~~~~~ 249 (249)
+..+|+++|
T Consensus 159 i~~l~~~~~ 167 (376)
T TIGR01977 159 IGELAQENG 167 (376)
T ss_pred HHHHHHHcC
Confidence 778888875
No 110
>PRK10534 L-threonine aldolase; Provisional
Probab=99.73 E-value=5.1e-17 Score=145.01 Aligned_cols=148 Identities=19% Similarity=0.258 Sum_probs=116.2
Q ss_pred eeeccCCCCCCCCCHHHHHHHHh-ccCCCCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 025730 97 IVKIDANENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (249)
Q Consensus 97 ~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vl 174 (249)
+|||++|+++. +++.+.+++.+ .....+| |+++..+|++++++++|+++ +++++|+++++.+++.+++.+||+|+
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~--~~v~~~g~~a~~~~l~~~~~~gd~vi 77 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEA--ALFLPTGTQANLVALLSHCERGEEYI 77 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCe--EEEeCchHHHHHHHHHHhcCCCCeeE
Confidence 48999999999 88999999876 3444678 88889999999999999754 45777777778777778899999999
Q ss_pred EcCCCCh-hHHHH-HHHCC-CEEEEecCCCCCCCCHHHHHHhhccC-----CceEEEEcCCCCccccCCChHHH--HHHH
Q 025730 175 DCPPTFT-MYEFD-AAVNG-AAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGRFSWTSSW--IWGI 244 (249)
Q Consensus 175 v~~P~y~-~~~~~-~~~~G-~~v~~v~~~~~~~id~e~l~~~i~~~-----~~k~i~l~~PnNPTG~~~~~~e~--i~~i 244 (249)
++.|+|. .|... +...| ++++.++.++++.+|+++++++++.. ++++|++|||+| |.+++.+++ +.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~--G~v~~~~~l~~i~~~ 155 (333)
T PRK10534 78 VGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN--GKVLPREYLKQAWEF 155 (333)
T ss_pred EechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCCC--CeecCHHHHHHHHHH
Confidence 9988885 34321 23343 78888887778999999999998632 689999998774 999887765 4456
Q ss_pred hhhhC
Q 025730 245 SSEHN 249 (249)
Q Consensus 245 ~~~~~ 249 (249)
|++||
T Consensus 156 ~~~~~ 160 (333)
T PRK10534 156 TRERN 160 (333)
T ss_pred HHHcC
Confidence 77654
No 111
>PLN02721 threonine aldolase
Probab=99.72 E-value=7.5e-17 Score=144.55 Aligned_cols=151 Identities=19% Similarity=0.214 Sum_probs=117.4
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHhc--cCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCe
Q 025730 96 DIVKIDANENPYGPPPEVREALGQL--KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDK 172 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~~--~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~-pGd~ 172 (249)
.+++|+.|++++ +++.+.+++... .....|+++...+|+++++++++.+. +++++++++++..++..+++ +||+
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~~~~~gd~ 82 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVHCDVRGSE 82 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCce--eEEecCccHHHHHHHHHHccCCCCe
Confidence 468999999997 678888888753 33344555557899999999999753 45555555566677777777 9999
Q ss_pred EEEcCCCCh-hHHH--HHHHCCCEEEEecCCCCCCCCHHHHHHhhcc------CCceEEEEcC-CCCccccCCChH--HH
Q 025730 173 IVDCPPTFT-MYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTS-PNNPDGRFSWTS--SW 240 (249)
Q Consensus 173 Vlv~~P~y~-~~~~--~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~------~~~k~i~l~~-PnNPTG~~~~~~--e~ 240 (249)
|++++|+|. .|.. .+...|++++.++.++++.+|++++++++++ +++++|++++ +|||||.+++.+ +.
T Consensus 83 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~ 162 (353)
T PLN02721 83 VILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK 162 (353)
T ss_pred EEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence 999999985 4442 5677899999999877788999999999963 3789999987 578999998765 55
Q ss_pred HHHHhhhhC
Q 025730 241 IWGISSEHN 249 (249)
Q Consensus 241 i~~i~~~~~ 249 (249)
+.++|+++|
T Consensus 163 l~~l~~~~g 171 (353)
T PLN02721 163 VGELAKRHG 171 (353)
T ss_pred HHHHHHHcC
Confidence 788898875
No 112
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.71 E-value=4.4e-16 Score=142.92 Aligned_cols=151 Identities=17% Similarity=0.230 Sum_probs=120.1
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHh-ccCC--C----CCC-C----cChHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQ-LKFP--Y----IYP-D----PESRRLRAALAKDSGL-ESDHILVGCGADELIDLI 162 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~-~~~~--~----~Yp-~----~g~~~lr~~la~~~~~-~~~~I~vt~Ga~~~l~~~ 162 (249)
+++.|+.+.... +|+.+.+++.. +... + .|. . ....++|++++++++. ++++|++|+|+++++.++
T Consensus 23 ~~iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~ 101 (406)
T PRK09295 23 PLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLV 101 (406)
T ss_pred ceEEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHH
Confidence 579999887653 66778888765 2211 1 111 0 1256899999999997 678999999999999999
Q ss_pred HHH----hcCCCCeEEEcCCCCh----hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 163 MRC----VLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 163 ~~~----~~~pGd~Vlv~~P~y~----~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
+.+ ++++||+|++++++|. .|...++..|++++.++.+.++.+|+++++++++ +++++|++++|+||||.+
T Consensus 102 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~l~~~~n~tG~~ 180 (406)
T PRK09295 102 ANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-ERTRLLAITHVSNVLGTE 180 (406)
T ss_pred HHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-CCcEEEEEecchhccccc
Confidence 886 4689999999998875 4566677789999999987778899999999997 689999999999999999
Q ss_pred CChHHHHHHHhhhhC
Q 025730 235 SWTSSWIWGISSEHN 249 (249)
Q Consensus 235 ~~~~e~i~~i~~~~~ 249 (249)
++ .+.+.++|+++|
T Consensus 181 ~~-~~~i~~~~~~~~ 194 (406)
T PRK09295 181 NP-LAEMIALAHQHG 194 (406)
T ss_pred CC-HHHHHHHHHHcC
Confidence 65 556677788775
No 113
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.70 E-value=4.6e-16 Score=138.17 Aligned_cols=151 Identities=35% Similarity=0.554 Sum_probs=124.3
Q ss_pred eeccCCCCCCCCCHHHHHHHHh--c-cCCCCC-CCcChHHHHHHHHHHcCCC------CCCEEEeCCHHHHHHHHHHHhc
Q 025730 98 VKIDANENPYGPPPEVREALGQ--L-KFPYIY-PDPESRRLRAALAKDSGLE------SDHILVGCGADELIDLIMRCVL 167 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~--~-~~~~~Y-p~~g~~~lr~~la~~~~~~------~~~I~vt~Ga~~~l~~~~~~~~ 167 (249)
|+|+.|.+++.+++.+.+++.. . .....| +..+..++++.++++++.. .+++++++|+++++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 5789999999988887777653 1 122445 4567899999999998643 6789999999999999999999
Q ss_pred CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCH--HHHHHhhccCCceEEEEcCCCCccccCCChHHHH--HH
Q 025730 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWI--WG 243 (249)
Q Consensus 168 ~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~--e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i--~~ 243 (249)
++||+|+++.|+|..+...++..|.+++.++.++++..+. +.++.... .++++|++++|+||||.+++.+++. ..
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~ 159 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAE 159 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 9999999999999999999999999999999766666654 66666555 7899999999999999998766553 47
Q ss_pred HhhhhC
Q 025730 244 ISSEHN 249 (249)
Q Consensus 244 i~~~~~ 249 (249)
+|+++|
T Consensus 160 ~~~~~~ 165 (350)
T cd00609 160 LAKKHG 165 (350)
T ss_pred HHHhCC
Confidence 888875
No 114
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.70 E-value=2.8e-16 Score=140.03 Aligned_cols=143 Identities=20% Similarity=0.261 Sum_probs=114.5
Q ss_pred CCCCCCCCHHHHHHHHh-ccCCCCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC
Q 025730 103 NENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (249)
Q Consensus 103 ~~~~~~~p~~v~~al~~-~~~~~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y 180 (249)
.++++++++.+.+++.+ ......| ++....++++.+++++| ++++++++|+++++..++.+++++||+|+++.|+|
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~ 81 (338)
T cd06502 4 SDTVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAH 81 (338)
T ss_pred cccCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcc
Confidence 47889999999999986 3222355 66678899999999999 56777888888999999999999999999999998
Q ss_pred hhHH---HHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc------CCceEEEEcCCCCccccCCChHH--HHHHHhhhhC
Q 025730 181 TMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGRFSWTSS--WIWGISSEHN 249 (249)
Q Consensus 181 ~~~~---~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~------~~~k~i~l~~PnNPTG~~~~~~e--~i~~i~~~~~ 249 (249)
..+. ..+...|++++.++.+. +.+|++++++++++ .++++|+++||||| |.+++..+ .+.++|+++|
T Consensus 82 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~ 159 (338)
T cd06502 82 IYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENG 159 (338)
T ss_pred eeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcC
Confidence 6432 23455899999999754 78999999999973 26899999999998 55556554 4677888764
No 115
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.70 E-value=4.1e-16 Score=140.26 Aligned_cols=144 Identities=21% Similarity=0.229 Sum_probs=117.7
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCcC--hHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh
Q 025730 105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (249)
Q Consensus 105 ~~~~~p~~v~~al~~~~~~~~Yp~~g--~~~lr~~la~~~~~~~~-~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~ 181 (249)
.+.+.|+.+.+++.+....++|+... .+++++.+++++|++++ .+++++|+++++.+++.+++.+||+|++..++|.
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~ 85 (356)
T cd06451 6 GPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVF 85 (356)
T ss_pred CCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCch
Confidence 34567789999987632235666543 67899999999998554 5778888899999999999999999999988765
Q ss_pred h--HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 182 M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 182 ~--~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
. +...++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.++ +.+.+.++|+++|
T Consensus 86 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~-~~~~i~~~a~~~~ 154 (356)
T cd06451 86 GDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLN-PLEGIGALAKKHD 154 (356)
T ss_pred hHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCccccc-CHHHHHHHHHhcC
Confidence 3 56777889999999998767889999999999744899999999999999995 5666777888875
No 116
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.69 E-value=8e-16 Score=142.00 Aligned_cols=152 Identities=21% Similarity=0.171 Sum_probs=120.5
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCC----CC---CCCc----ChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFP----YI---YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELIDL 161 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~----~~---Yp~~----g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~ 161 (249)
.+.+.|+.+... ++|+.+.+++.+ +... .+ |... ...++|+.++++++.+ +++|++|+|+++++.+
T Consensus 31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~ 109 (424)
T PLN02855 31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL 109 (424)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence 357999997765 577888888765 2111 11 1111 2468999999999985 5799999999999999
Q ss_pred HHHH----hcCCCCeEEEcCCCCh----hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 162 IMRC----VLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 162 ~~~~----~~~pGd~Vlv~~P~y~----~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
+++. .+++||+|++.++.|+ .|...++..|++++.++.+.++.+|+++++++++ .++++|++++|+||||.
T Consensus 110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~ 188 (424)
T PLN02855 110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS-EKTKLVATHHVSNVLGS 188 (424)
T ss_pred HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEeCccccccc
Confidence 9876 3689999999999775 4566677789999999977667799999999998 68999999999999999
Q ss_pred CCChHHHHHHHhhhhC
Q 025730 234 FSWTSSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~i~~i~~~~~ 249 (249)
+++ .+.+.++|+++|
T Consensus 189 ~~~-~~~I~~l~~~~g 203 (424)
T PLN02855 189 ILP-VEDIVHWAHAVG 203 (424)
T ss_pred cCC-HHHHHHHHHHcC
Confidence 975 456677888875
No 117
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.69 E-value=1.4e-16 Score=141.73 Aligned_cols=125 Identities=25% Similarity=0.413 Sum_probs=107.0
Q ss_pred CCCCC-cChHHHHHHHHHHc--------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHH-CCCE
Q 025730 124 YIYPD-PESRRLRAALAKDS--------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAA 193 (249)
Q Consensus 124 ~~Yp~-~g~~~lr~~la~~~--------~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~-~G~~ 193 (249)
..|++ .|.+.+|+++|+++ ..+|+++++++|++.+.+.++.++++|||..+++.|.|+.+....+. .|++
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve 194 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE 194 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence 45655 58999999999997 26899999999999999999999999999999999999998877766 6889
Q ss_pred EEEec--CCCCCCCCHHHHHHhhcc-----CCceEEEEcCCCCccccCCChHHHHH--HHhhhh
Q 025730 194 VVKVP--RKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGRFSWTSSWIW--GISSEH 248 (249)
Q Consensus 194 v~~v~--~~~~~~id~e~l~~~i~~-----~~~k~i~l~~PnNPTG~~~~~~e~i~--~i~~~~ 248 (249)
+++|. ..++|+++++++|+++.+ .++|.|+|+||+||.|.+++++++.. ..++++
T Consensus 195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k 258 (471)
T KOG0256|consen 195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK 258 (471)
T ss_pred EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc
Confidence 98887 456799999999999853 57899999999999999999997743 344443
No 118
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.69 E-value=1.2e-15 Score=139.66 Aligned_cols=152 Identities=20% Similarity=0.253 Sum_probs=121.7
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCCCCCCC-----------cChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGLE-SDHILVGCGADELIDL 161 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~ 161 (249)
.+++.|+.+... ++|+.+.+++.+ +......|. ...+++|+.+++++|.+ +++|++|+|+++++.+
T Consensus 17 ~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~ 95 (403)
T TIGR01979 17 KPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINL 95 (403)
T ss_pred CceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHH
Confidence 467999998876 466778888865 221111111 13568999999999997 6899999999999999
Q ss_pred HHHHh----cCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 162 ~~~~~----~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
++.++ +++||+|+++++.|.. |...++..|++++.++.++++.+|+++++++++ +++++|++++|+||||.
T Consensus 96 ~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-~~~~lv~~~~~~~~tG~ 174 (403)
T TIGR01979 96 VAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-EKTKLVAITHVSNVLGT 174 (403)
T ss_pred HHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-cCCeEEEEEcccccccc
Confidence 98875 5789999999998753 455666789999999987778899999999997 68999999999999999
Q ss_pred CCChHHHHHHHhhhhC
Q 025730 234 FSWTSSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~i~~i~~~~~ 249 (249)
+++ .+.+..+|+++|
T Consensus 175 ~~~-~~~i~~~~~~~~ 189 (403)
T TIGR01979 175 VNP-VEEIAKLAHQVG 189 (403)
T ss_pred cCC-HHHHHHHHHHcC
Confidence 965 566777888875
No 119
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.68 E-value=1.3e-15 Score=137.84 Aligned_cols=117 Identities=24% Similarity=0.263 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcC---CCCeEEEcCCCChh----HHHHHHHCCCEEEEecCCCC
Q 025730 131 SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSD 202 (249)
Q Consensus 131 ~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~~~~~~~---pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~~~~ 202 (249)
..++|+.++++++.+ +++|++|+|+++++.+++.++.. +||+|++++++|.. +...++..|++++.++.+.+
T Consensus 45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 124 (373)
T cd06453 45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD 124 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence 457999999999987 78999999999999999999887 89999999999975 34455678999999998777
Q ss_pred CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 ~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.+|+++++++++ +++++|++++|+||||.++ +.+.+..+|+++|
T Consensus 125 ~~~d~~~l~~~l~-~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~ 169 (373)
T cd06453 125 GQLDLEALEKLLT-ERTKLVAVTHVSNVLGTIN-PVKEIGEIAHEAG 169 (373)
T ss_pred CCcCHHHHHHHhc-CCceEEEEeCcccccCCcC-CHHHHHHHHHHcC
Confidence 8899999999998 5899999999999999996 4567778888875
No 120
>PRK02948 cysteine desulfurase; Provisional
Probab=99.68 E-value=1e-15 Score=139.10 Aligned_cols=149 Identities=15% Similarity=0.112 Sum_probs=115.6
Q ss_pred eeccCCCCCCCCCHHHHHHHHh-ccC-C----CCCCC-----cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 98 VKIDANENPYGPPPEVREALGQ-LKF-P----YIYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~-~~~-~----~~Yp~-----~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
+.|+.+.... +|+.+.+++.+ +.. . ..|.. .-..++|+.+++++|.++++|++|+|+++++..++.++
T Consensus 2 ~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATTP-MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCCC-CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 5677666553 56788888865 221 1 11110 11457899999999999999999999999999988877
Q ss_pred c----CCCCeEEEcCCCCh---hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 167 L----DPGDKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 167 ~----~pGd~Vlv~~P~y~---~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
+ ++||+|++....|+ .+...++..|++++.++.++++.+|+++++++++ +++++|++++||||||.++ +.+
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~-~~~ 158 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-PDTVLASIQHANSEIGTIQ-PIA 158 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-CCCEEEEEECCcCCcEeeh-hHH
Confidence 5 57899999986665 4444566789999999987778899999999997 6889999999999999996 556
Q ss_pred HHHHHhhhhC
Q 025730 240 WIWGISSEHN 249 (249)
Q Consensus 240 ~i~~i~~~~~ 249 (249)
.+..+|+++|
T Consensus 159 ~I~~l~~~~~ 168 (381)
T PRK02948 159 EIGALLKKYN 168 (381)
T ss_pred HHHHHHHHcC
Confidence 6777888765
No 121
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.68 E-value=1.5e-15 Score=137.27 Aligned_cols=143 Identities=22% Similarity=0.214 Sum_probs=113.2
Q ss_pred CCCCCCCHHHHHHHHhccC--C-----C-CC---CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCe
Q 025730 104 ENPYGPPPEVREALGQLKF--P-----Y-IY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (249)
Q Consensus 104 ~~~~~~p~~v~~al~~~~~--~-----~-~Y---p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~ 172 (249)
..+-+..+.+.+++..... . . .. -++...++++++++++|+ +++++|+|+++++.+++.+++++||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~~gd~ 85 (361)
T cd06452 8 QRGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCEKGDW 85 (361)
T ss_pred hcCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcCCCCE
Confidence 3444556788888876321 1 0 11 113367899999999997 78999999999999999999999999
Q ss_pred EEEcCCCChhHHHHHHHCCCEEEEecCCCC--CCCCHHHHHHhhcc------CCceEEEEcCCCCccccCCChHHHHHHH
Q 025730 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVER------EKPKCIFLTSPNNPDGRFSWTSSWIWGI 244 (249)
Q Consensus 173 Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~--~~id~e~l~~~i~~------~~~k~i~l~~PnNPTG~~~~~~e~i~~i 244 (249)
|+++.++|......++..|++++.++.+.+ |.+|++++++++++ .++++|+++|||||||.. .+.+.+.++
T Consensus 86 Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~-~~~~~i~~~ 164 (361)
T cd06452 86 VVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL-HDAKKIAKV 164 (361)
T ss_pred EEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee-ccHHHHHHH
Confidence 999999876555677889999999997543 58999999998862 378999999999999998 566677778
Q ss_pred hhhhC
Q 025730 245 SSEHN 249 (249)
Q Consensus 245 ~~~~~ 249 (249)
|+++|
T Consensus 165 ~~~~~ 169 (361)
T cd06452 165 CHEYG 169 (361)
T ss_pred HHHcC
Confidence 88865
No 122
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.66 E-value=5.6e-15 Score=134.82 Aligned_cols=150 Identities=19% Similarity=0.202 Sum_probs=119.4
Q ss_pred eeeccCCCCCCCCCHHHHHHHHh-ccC-----CCCCCCc-C----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 025730 97 IVKIDANENPYGPPPEVREALGQ-LKF-----PYIYPDP-E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 97 ~I~L~~~~~~~~~p~~v~~al~~-~~~-----~~~Yp~~-g----~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
.+.|+.+.... +|+.+++++.+ +.. ...|+.. + ..++|+.+++++|.++++|++++|+++++.+++.+
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence 68998876654 67778887765 221 1235432 1 46899999999999877899999999999888776
Q ss_pred h---cCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecCCC-CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCCh
Q 025730 166 V---LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 166 ~---~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~~~-~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~ 237 (249)
+ +++||+|++.+|.|.. |...++..|++++.++.+. ++.+|+++++++++ +++++|++++|+||||.++ +
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~-~ 174 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-PRTRLVAVTAASNTLGSIV-D 174 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-CCceEEEEeCCCCCCCccC-C
Confidence 5 6899999999998853 3455677899999998754 67899999999997 6899999999999999995 5
Q ss_pred HHHHHHHhhhhC
Q 025730 238 SSWIWGISSEHN 249 (249)
Q Consensus 238 ~e~i~~i~~~~~ 249 (249)
.+.+.++|++||
T Consensus 175 ~~~i~~~~~~~~ 186 (397)
T TIGR01976 175 LAAITELVHAAG 186 (397)
T ss_pred HHHHHHHHHHcC
Confidence 677778888875
No 123
>PRK14012 cysteine desulfurase; Provisional
Probab=99.65 E-value=7.7e-15 Score=134.66 Aligned_cols=149 Identities=18% Similarity=0.210 Sum_probs=117.5
Q ss_pred eeccCCCCCCCCCHHHHHHHHh-ccCCCCC--CC-----------cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 98 VKIDANENPYGPPPEVREALGQ-LKFPYIY--PD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~-~~~~~~Y--p~-----------~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
|.|+.+... ++|+.+.+++.. +.....| +. ....++|+.+++++|.++++|++++|+++++.+++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 677777664 567788888765 3200011 10 12457899999999998899999999999999988
Q ss_pred HHhc----CCCCeEEEcCCCChhHHHHH---HHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 164 RCVL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 164 ~~~~----~pGd~Vlv~~P~y~~~~~~~---~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
.++. .+||+|+++.++|..+...+ +..|++++.++.+.++.+|+++++++++ .++++|++++++||||.++
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~- 161 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-DDTILVSIMHVNNEIGVIQ- 161 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECcCCCccchh-
Confidence 7663 78999999999997654333 3469999999987788899999999998 6899999999999999995
Q ss_pred hHHHHHHHhhhhC
Q 025730 237 TSSWIWGISSEHN 249 (249)
Q Consensus 237 ~~e~i~~i~~~~~ 249 (249)
+.+.+..+|+++|
T Consensus 162 ~~~~I~~la~~~g 174 (404)
T PRK14012 162 DIAAIGEICRERG 174 (404)
T ss_pred hHHHHHHHHHHcC
Confidence 5677888898875
No 124
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.64 E-value=1e-14 Score=133.21 Aligned_cols=153 Identities=22% Similarity=0.223 Sum_probs=123.1
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHhccC--C------CCCC---CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQLKF--P------YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~~~~--~------~~Yp---~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
.+++|+|+--.---++++.+.+++.+... . +++. .+...++++.+|+++|. +++++++|+++++..+
T Consensus 17 ~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--~~~~~~~g~t~a~~~a 94 (387)
T PRK09331 17 EEEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--DEARVTHGAREGKFAV 94 (387)
T ss_pred cccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHH
Confidence 45667777665555677888888876211 1 1111 22468999999999997 4688899999999999
Q ss_pred HHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhcc------CCceEEEEcCCCCccccC
Q 025730 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 163 ~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~------~~~k~i~l~~PnNPTG~~ 234 (249)
+.+++++||+|++..++|......++..|++++.++. ++++.+|++++++++++ +++++|++++|+|+||.+
T Consensus 95 l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~ 174 (387)
T PRK09331 95 MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNL 174 (387)
T ss_pred HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccc
Confidence 9999999999999999987655667889999999997 66788999999999863 268999999999999998
Q ss_pred CChHHHHHHHhhhhC
Q 025730 235 SWTSSWIWGISSEHN 249 (249)
Q Consensus 235 ~~~~e~i~~i~~~~~ 249 (249)
.+.+.+..+|+++|
T Consensus 175 -~~l~~I~~la~~~g 188 (387)
T PRK09331 175 -ADAKKVAKVAHEYG 188 (387)
T ss_pred -ccHHHHHHHHHHcC
Confidence 57778888899875
No 125
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.63 E-value=1.3e-14 Score=133.15 Aligned_cols=149 Identities=21% Similarity=0.258 Sum_probs=117.0
Q ss_pred eeccCCCCCCCCCHHHHHHHHh-cc--C--CCCCC-------CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 025730 98 VKIDANENPYGPPPEVREALGQ-LK--F--PYIYP-------DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~-~~--~--~~~Yp-------~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
+.|+.+... +.++.+++++.. +. . ..... .....++|+.+++++|+++++|++|+|+++++.+++..
T Consensus 5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG 83 (402)
T ss_pred EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence 678777654 467788888754 21 1 11100 11256789999999999999999999999999998876
Q ss_pred hc----CCCCeEEEcCCCChhHHHH---HHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 166 VL----DPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 166 ~~----~pGd~Vlv~~P~y~~~~~~---~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
+. ++||+|++..++|..+... ++..|++++.++.+.++.+|+++++++++ +++++|++++++||||.+. +.
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~v~~~~n~tG~~~-~~ 161 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-DDTILVSIMHVNNEIGVIQ-DI 161 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECCCcCceecc-cH
Confidence 53 6899999999999854433 34569999999987788899999999997 6799999999999999995 56
Q ss_pred HHHHHHhhhhC
Q 025730 239 SWIWGISSEHN 249 (249)
Q Consensus 239 e~i~~i~~~~~ 249 (249)
+.+..+|+++|
T Consensus 162 ~~I~~l~~~~g 172 (402)
T TIGR02006 162 AAIGEICRERK 172 (402)
T ss_pred HHHHHHHHHcC
Confidence 67788888875
No 126
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.63 E-value=1.1e-14 Score=135.19 Aligned_cols=150 Identities=17% Similarity=0.182 Sum_probs=120.0
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHhccCCCCC-C-----CcC----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Y-p-----~~g----~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
..+.|+.+.+++..|..+.+.+........| | ..+ ..++++.+++++|++.+++++|+|+++++..++.+
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a 148 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMA 148 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH
Confidence 5678889999988887776665432221234 3 222 23455777888999888999999999999999888
Q ss_pred hc-CCCCeEEEcCCCChhHHHHHHH----CCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH
Q 025730 166 VL-DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW 240 (249)
Q Consensus 166 ~~-~pGd~Vlv~~P~y~~~~~~~~~----~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~ 240 (249)
+. .+||+|+++++.|+.|...++. .|++++.++.+++ .+|+++++++++ +++++|++++| ||||.+ .+.+.
T Consensus 149 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-~~t~~v~l~~p-n~tG~v-~~l~~ 224 (447)
T PRK00451 149 VRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-DDTAAVVVQYP-NFFGVI-EDLEE 224 (447)
T ss_pred HHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-CCeEEEEEECC-CCCCee-CCHHH
Confidence 74 7999999999999877766554 7999999998777 899999999997 68999999999 899999 46777
Q ss_pred HHHHhhhhC
Q 025730 241 IWGISSEHN 249 (249)
Q Consensus 241 i~~i~~~~~ 249 (249)
+.++|+++|
T Consensus 225 I~~~a~~~~ 233 (447)
T PRK00451 225 IAEIAHAGG 233 (447)
T ss_pred HHHHHHHCC
Confidence 888999875
No 127
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.62 E-value=4.3e-15 Score=135.66 Aligned_cols=137 Identities=20% Similarity=0.198 Sum_probs=106.2
Q ss_pred eeccCCCCCCCCCHHHHHHHHhccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcC
Q 025730 98 VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP 177 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~ 177 (249)
|.++.+.++....+. .... ..+|+++...+|+++++++.+ .+++++++|++++|.+++.+++++||+|+++.
T Consensus 26 i~~ss~~~~~~~~~~-----~~~~-Y~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~ 97 (382)
T TIGR02080 26 IYLSTTYNFTGFNEP-----RAYD-YSRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPH 97 (382)
T ss_pred eeCCceeEeCCcCcc-----CCCc-ccCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcC
Confidence 777777765542211 1111 367888889999999999998 57899999999999999999999999999999
Q ss_pred CCChh-HHHHH---HHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 178 PTFTM-YEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 178 P~y~~-~~~~~---~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
|+|.. |.... ...|.++..++. .|+++++++++ +++|+|++++||||||.+++ .+.+.++|+++|
T Consensus 98 p~y~~~~~~~~~~~~~~~~~v~~~d~-----~d~~~l~~ai~-~~tklV~l~~p~NPtG~~~d-l~~I~~la~~~g 166 (382)
T TIGR02080 98 DCYGGTYRLLNALAKKGCFRVLFVDQ-----GDEQALRAALA-QKPKLVLIETPSNPLLRVVD-IAKICHLAKAVG 166 (382)
T ss_pred CCcHHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcC-cCceEEEEECCCCCCCEecC-HHHHHHHHHHcC
Confidence 99984 43322 223566666542 37899999997 68999999999999999964 556777788765
No 128
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=7.2e-15 Score=134.32 Aligned_cols=117 Identities=21% Similarity=0.215 Sum_probs=99.2
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh-HHHH---HHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFD---AAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~-~~~~---~~~~G~~v~~v~~ 199 (249)
.+|+++....|++++|++.| .+++++++|+++++.+++.+++++||+|+++.|+|.. +... ....|.+++.++.
T Consensus 48 ~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 48 TRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 57788889999999999999 5899999999999999999999999999999999984 4432 2335788888853
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++++|++++||||||.+++ .+.+..+|+++|
T Consensus 126 -----~d~e~l~~~i~-~~tklV~lesP~NPtG~v~d-l~~I~~la~~~g 168 (388)
T PRK08861 126 -----SDAAALDAALA-KKPKLILLETPSNPLVRVVD-IAELCQKAKAVG 168 (388)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCCCcccC-HHHHHHHHHHcC
Confidence 58999999997 68999999999999999975 456677788764
No 129
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=3e-14 Score=130.82 Aligned_cols=153 Identities=24% Similarity=0.274 Sum_probs=129.2
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHhc-----cCCC--CCCCc-----ChHHHHHHHHHHcCCCC-CCEEEeCCHHHHHH
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQL-----KFPY--IYPDP-----ESRRLRAALAKDSGLES-DHILVGCGADELID 160 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~~-----~~~~--~Yp~~-----g~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~ 160 (249)
.++++.|+...... .|..+.+++... ...+ .|+.. ..++.|+.+++++|.++ ++|++|.|+|++|+
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln 98 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN 98 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence 35678999887776 778888888752 1111 12211 25789999999999985 89999999999999
Q ss_pred HHHHHh---cCCCCeEEEcCCCCh----hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 161 LIMRCV---LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 161 ~~~~~~---~~pGd~Vlv~~P~y~----~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
++..++ +.+||+|++.+-.|. +|...++..|++++.+|.++++.+|.+.++..++ ++||+|.+++.+|.||.
T Consensus 99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-~~Tklvais~vSn~tG~ 177 (405)
T COG0520 99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-PKTKLVALSHVSNVTGT 177 (405)
T ss_pred HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-CCceEEEEECccccccc
Confidence 999998 699999999999986 6778888889999999988889999999999888 79999999999999999
Q ss_pred CCChHHHHHHHhhhhC
Q 025730 234 FSWTSSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~i~~i~~~~~ 249 (249)
+ .+.+.|.++|+++|
T Consensus 178 ~-~pv~~I~~la~~~g 192 (405)
T COG0520 178 V-NPVKEIAELAHEHG 192 (405)
T ss_pred c-chHHHHHHHHHHcC
Confidence 9 67888899999986
No 130
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.61 E-value=1.3e-14 Score=133.31 Aligned_cols=116 Identities=22% Similarity=0.282 Sum_probs=98.7
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHH----HHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~----~~~~~~G~~v~~v~~ 199 (249)
.+||+++..+|++++++++|. +++++++|+++++..++.+++++||+|+++.|.|..+. ..++..|++++.++.
T Consensus 59 ~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 59 SRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred cCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 566788999999999999995 46788899999999999999999999999999886433 334668999999975
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhh
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEH 248 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~ 248 (249)
. |+++++++++ +++|+|++++|+||||.+. +.+.+.++|+++
T Consensus 137 ~-----d~e~l~~~i~-~~tklI~iesP~NPtG~v~-dl~~I~~la~~~ 178 (400)
T PRK06234 137 S-----NLEEVRNALK-ANTKVVYLETPANPTLKVT-DIKAISNIAHEN 178 (400)
T ss_pred C-----CHHHHHHHhc-cCCeEEEEECCCCCCCCcC-CHHHHHHHHHhc
Confidence 3 7899999997 6899999999999999995 566777888875
No 131
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.61 E-value=3e-14 Score=129.46 Aligned_cols=147 Identities=21% Similarity=0.222 Sum_probs=112.7
Q ss_pred ccCCCCCCCCCHHHHHHHHh-ccCCCCCCCc----------ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc-
Q 025730 100 IDANENPYGPPPEVREALGQ-LKFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL- 167 (249)
Q Consensus 100 L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~~----------g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~- 167 (249)
|+.+... ++|+.+.+++.+ +.....+|.. ...++|+.+++++|+++++|++|+|+++++.+++..++
T Consensus 3 ld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 3 LDNNATT-RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CCCcCCC-CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 4444332 356788888865 2211222211 14578899999999999999999999999999988764
Q ss_pred --CCCCeEEEcCCCChhHHH---HHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHH
Q 025730 168 --DPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 168 --~pGd~Vlv~~P~y~~~~~---~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~ 242 (249)
.+||+|++...+|+.+.. ..+..|.+++.++.+.++.+|+++++++++ ++++++++++++||||.+++ .+.+.
T Consensus 82 ~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~-~~~I~ 159 (379)
T TIGR03402 82 AQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-DDTALVSVMWANNETGTIFP-IEEIG 159 (379)
T ss_pred hcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEEcccCCeeeccc-HHHHH
Confidence 456899999988875433 334479999999987777899999999997 68999999999999999965 56678
Q ss_pred HHhhhhC
Q 025730 243 GISSEHN 249 (249)
Q Consensus 243 ~i~~~~~ 249 (249)
.+|+++|
T Consensus 160 ~l~~~~g 166 (379)
T TIGR03402 160 EIAKERG 166 (379)
T ss_pred HHHHHcC
Confidence 8898875
No 132
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=1.5e-14 Score=132.24 Aligned_cols=117 Identities=23% Similarity=0.267 Sum_probs=97.0
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh-HHHHHHH---CCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDAAV---NGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~-~~~~~~~---~G~~v~~v~~ 199 (249)
.+|+++....|++++|+++|. +++++++|++++|.+++.+++++||+|++++|+|.. |...... .|.++..++
T Consensus 47 ~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 123 (386)
T PRK08045 47 SRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD- 123 (386)
T ss_pred eCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence 678888899999999999994 479999999999999999999999999999999984 4433322 445666664
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..|+++++++++ +++|+|++++||||||.++ +.+.+.++|+++|
T Consensus 124 ----~~d~e~l~~~l~-~~tklV~l~sP~NPtG~v~-di~~I~~ia~~~g 167 (386)
T PRK08045 124 ----QGDEQALRAALA-EKPKLVLVESPSNPLLRVV-DIAKICHLAREAG 167 (386)
T ss_pred ----CCCHHHHHHhcc-cCCeEEEEECCCCCCCEec-CHHHHHHHHHHcC
Confidence 258999999997 6899999999999999996 4567777788764
No 133
>PLN02651 cysteine desulfurase
Probab=99.60 E-value=3e-14 Score=128.99 Aligned_cols=148 Identities=20% Similarity=0.220 Sum_probs=113.2
Q ss_pred eccCCCCCCCCCHHHHHHHHh-ccCCCCCCC-----------cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 99 KIDANENPYGPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 99 ~L~~~~~~~~~p~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
.|+.+... +.|+.+.+++.. +......|. .-..++|+.+++++|.++++|++|+|+++++++++..+
T Consensus 2 Yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~ 80 (364)
T PLN02651 2 YLDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGV 80 (364)
T ss_pred cccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHH
Confidence 45555444 467888888865 211111111 11567899999999999899999999999988876654
Q ss_pred ----cCCCCeEEEcCCCChhHHH---HHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 167 ----LDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 167 ----~~pGd~Vlv~~P~y~~~~~---~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
.++||+|++....|+.+.. ..+..|++++.++.++++.+|+++++++++ ++++++++++++|+||.++ +.+
T Consensus 81 ~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~v~~~~n~tG~~~-~l~ 158 (364)
T PLN02651 81 MHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-PDTALVSVMAVNNEIGVIQ-PVE 158 (364)
T ss_pred HHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEECCCCCceecc-cHH
Confidence 4789999999977764333 233579999999987778899999999998 6899999999999999995 566
Q ss_pred HHHHHhhhhC
Q 025730 240 WIWGISSEHN 249 (249)
Q Consensus 240 ~i~~i~~~~~ 249 (249)
.+.++|+++|
T Consensus 159 ~I~~~~~~~g 168 (364)
T PLN02651 159 EIGELCREKK 168 (364)
T ss_pred HHHHHHHHcC
Confidence 7778898875
No 134
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.60 E-value=1.4e-14 Score=131.76 Aligned_cols=148 Identities=18% Similarity=0.177 Sum_probs=109.7
Q ss_pred eccCCCCCCCCCHHHHHHHHh-ccC-------CCCCCCcChHHHHHHHHHHc---CC-CCCCEEEeCCHHHHHHHHHHHh
Q 025730 99 KIDANENPYGPPPEVREALGQ-LKF-------PYIYPDPESRRLRAALAKDS---GL-ESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 99 ~L~~~~~~~~~p~~v~~al~~-~~~-------~~~Yp~~g~~~lr~~la~~~---~~-~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
.|+.+.... +++.+++++.. ... .+.|+..+...+++++++++ +. ++++|++|+|+++++.++++++
T Consensus 2 yld~aa~~~-~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~ 80 (382)
T TIGR03403 2 YLDNNATTM-LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGV 80 (382)
T ss_pred cccCcCCCC-CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHH
Confidence 455555443 55678888765 211 12334334556777776665 44 6789999999999999999876
Q ss_pred c-----CC-CCeEEEcCCCChhHH---HHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCCh
Q 025730 167 L-----DP-GDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 167 ~-----~p-Gd~Vlv~~P~y~~~~---~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~ 237 (249)
. ++ ||+|++....|+.+. ..++..|++++.++.++++.+|+++++++++ .+++++++++||||||.+++
T Consensus 81 ~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~- 158 (382)
T TIGR03403 81 YFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-EKTALVSVMWANNETGMIFP- 158 (382)
T ss_pred HHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-cCCeEEEEEcccCCCccccC-
Confidence 2 45 478999987775443 3455689999999987778899999999997 68899999999999999975
Q ss_pred HHHHHHHhhhhC
Q 025730 238 SSWIWGISSEHN 249 (249)
Q Consensus 238 ~e~i~~i~~~~~ 249 (249)
.+.+..+|+++|
T Consensus 159 ~~~I~~la~~~g 170 (382)
T TIGR03403 159 IKEIGEICKERG 170 (382)
T ss_pred HHHHHHHHHHcC
Confidence 556777888875
No 135
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=1.6e-14 Score=132.44 Aligned_cols=117 Identities=19% Similarity=0.122 Sum_probs=100.9
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHH----HHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~----~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+++++| .+++++++|+++++.+++.+++++||+|++++|+|..+.. .+...|+++..++.
T Consensus 60 ~r~~~pt~~~Le~~lA~l~g--~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIEG--GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhC--CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 56788888999999999999 4689999999999999999999999999999999986553 45668999998874
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
. +.++++++++ +++|+|+++||+||+|.. .+.+.+.++|+++|
T Consensus 138 ~-----~~~~l~~~i~-~~tklV~le~p~Np~~~~-~di~~I~~ia~~~g 180 (394)
T PRK07050 138 L-----IGAGIADLIQ-PNTRLIWLEAPGSVTMEV-PDVPAITAAARARG 180 (394)
T ss_pred C-----CHHHHHHhcC-CCCeEEEEECCCCCCccH-hhHHHHHHHHHHcC
Confidence 2 4578888887 789999999999999988 57777888898875
No 136
>PRK07049 methionine gamma-lyase; Validated
Probab=99.59 E-value=2.4e-14 Score=132.51 Aligned_cols=117 Identities=19% Similarity=0.254 Sum_probs=95.0
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH----HHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~----~~~G~~v~~v~~ 199 (249)
.+|+++....|++.||++.+ .+++++++|++++|..++.+++++||+|+++.|+|..|...+ ...|++++.++.
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg--~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~ 155 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEG--AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD 155 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhC--CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence 67888889999999999998 457888899999999999999999999999999999887653 457998877763
Q ss_pred CCCCCCCHHHHHHhhc----cCCceEEEEcCCCCccccCCChHHHHHHHhhh
Q 025730 200 KSDFSLNVELIADAVE----REKPKCIFLTSPNNPDGRFSWTSSWIWGISSE 247 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~----~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~ 247 (249)
..|++.+++++. +.++|+||+++||||||.+++.+ .+.+|+++
T Consensus 156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~-~l~~la~~ 202 (427)
T PRK07049 156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVA-AVRRVADA 202 (427)
T ss_pred ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHH-HHHHHHHH
Confidence 246777776663 25799999999999999997554 44444443
No 137
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.59 E-value=3e-14 Score=131.05 Aligned_cols=117 Identities=21% Similarity=0.291 Sum_probs=96.6
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+|++.|. .+++++ ++++++|.+++.+++++||+|+++.|+|.. +...+...|.+++.++.
T Consensus 55 ~R~~~p~~~~Le~~lA~l~g~-~~~v~~-~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 55 TRSGNPTRDLLGEALAELEGG-AGGVIT-ATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred cCCCChHHHHHHHHHHHHhCC-CceEEE-cCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 566777788999999999986 345555 445799999999999999999999999985 45555667888888875
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ .++|+|+++||+||||.+ .+.+.+.++|+++|
T Consensus 133 -----~d~~~l~~~i~-~~tklV~l~~P~NPtG~v-~dl~~I~~la~~~g 175 (405)
T PRK08776 133 -----TDPRSLADALA-QSPKLVLIETPSNPLLRI-TDLRFVIEAAHKVG 175 (405)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCCCcc-CCHHHHHHHHHHcC
Confidence 37899999997 689999999999999999 46677777888875
No 138
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.58 E-value=7.2e-14 Score=127.36 Aligned_cols=148 Identities=11% Similarity=0.126 Sum_probs=118.9
Q ss_pred CCCeeeccCCCC-CCCCCHHHHHHHHh-cc-CCCCCCC-c---Ch----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 94 PEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYIYPD-P---ES----RRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 94 ~~~~I~L~~~~~-~~~~p~~v~~al~~-~~-~~~~Yp~-~---g~----~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
+.++|+|+.|+. .+++++++++++.+ +. .+..|+. . |. .+|++++|+++|. +++++++|+++++..+
T Consensus 37 g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--~~~ii~~~~~~a~~~~ 114 (393)
T TIGR01822 37 GREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGT--EDTILYASCFDANGGL 114 (393)
T ss_pred CceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CcEEEECchHHHHHHH
Confidence 457899999985 67778888888765 32 2345532 2 43 7899999999995 5688888999999999
Q ss_pred HHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---C--CceEEEEcCCCCccccCCCh
Q 025730 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 163 ~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~--~~k~i~l~~PnNPTG~~~~~ 237 (249)
+.+++++||+|++++|+|..+...++..+.+.+.++ ..|++++++++++ . ++++|++.+++||||.+. +
T Consensus 115 ~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~-~ 188 (393)
T TIGR01822 115 FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIA-P 188 (393)
T ss_pred HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcC-C
Confidence 999999999999999999998888888888776553 3789999998863 2 788999889999999994 5
Q ss_pred HHHHHHHhhhhC
Q 025730 238 SSWIWGISSEHN 249 (249)
Q Consensus 238 ~e~i~~i~~~~~ 249 (249)
.+.+.++|++||
T Consensus 189 l~~i~~la~~~~ 200 (393)
T TIGR01822 189 LDEICDLADKYD 200 (393)
T ss_pred HHHHHHHHHHcC
Confidence 677788899875
No 139
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.58 E-value=9.4e-14 Score=126.73 Aligned_cols=153 Identities=16% Similarity=0.189 Sum_probs=115.0
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHhccCCCCC-C-----CcChHHHHHHH----HHHcCCCCCCEEEeCCHH-HHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPESRRLRAAL----AKDSGLESDHILVGCGAD-ELIDLIM 163 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~~~~~~~Y-p-----~~g~~~lr~~l----a~~~~~~~~~I~vt~Ga~-~~l~~~~ 163 (249)
..++.|+.+++.+++|+.+.++.........| + ..|..++++++ ++++|++.++++++++++ ++...+.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~ 99 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGL 99 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHH
Confidence 35699999999999988887766554111334 2 24555555554 455677766777777544 4555555
Q ss_pred HHhcCC--CCeEEEcCCCChhHHHHHHHCC----CEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCCh
Q 025730 164 RCVLDP--GDKIVDCPPTFTMYEFDAAVNG----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 164 ~~~~~p--Gd~Vlv~~P~y~~~~~~~~~~G----~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~ 237 (249)
.+++.+ ||+|++++|.|+.+...+...| ++++.++.++++.+|+++++++++ +++++|++++|+ |||.+.+.
T Consensus 100 ~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~t~~viv~~~~-~~G~~~~~ 177 (398)
T cd00613 100 AAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-EEVAALMVQYPN-TLGVFEDL 177 (398)
T ss_pred HHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-CCeEEEEEECCC-CCceecch
Confidence 556666 9999999999998888877777 999999976677899999999997 689999999986 89999533
Q ss_pred HHHHHHHhhhhC
Q 025730 238 SSWIWGISSEHN 249 (249)
Q Consensus 238 ~e~i~~i~~~~~ 249 (249)
.+.+.++|++||
T Consensus 178 l~~i~~la~~~g 189 (398)
T cd00613 178 IKEIADIAHSAG 189 (398)
T ss_pred HHHHHHHHHhcC
Confidence 488999999986
No 140
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.58 E-value=1e-13 Score=124.80 Aligned_cols=140 Identities=21% Similarity=0.238 Sum_probs=108.1
Q ss_pred CCCHHHHHHHHh-ccCCCCCCC-----------cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC----CC-
Q 025730 108 GPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PG- 170 (249)
Q Consensus 108 ~~p~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~----pG- 170 (249)
++|+.+++++.+ +......|. .-..++|+.+++++++++++|++|+|+++++.+++.++.. +|
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~ 88 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGK 88 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCC
Confidence 466788888865 211111111 0146799999999999999999999999999999988753 56
Q ss_pred CeEEEcCCCChhH---HHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhh
Q 025730 171 DKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSE 247 (249)
Q Consensus 171 d~Vlv~~P~y~~~---~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~ 247 (249)
|.|++....|+.+ ...++..|++++.++.++++.+|+++++++++ +++++|++++|+||||.+++ .+.+.++|++
T Consensus 89 ~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~-~~~I~~l~~~ 166 (353)
T TIGR03235 89 KHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-PDTLLVSIMHVNNETGSIQP-IREIAEVLEA 166 (353)
T ss_pred CeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-CCCEEEEEEcccCCceeccC-HHHHHHHHHH
Confidence 7788887666643 33345579999999987778899999999997 68999999999999999964 5667778888
Q ss_pred hC
Q 025730 248 HN 249 (249)
Q Consensus 248 ~~ 249 (249)
+|
T Consensus 167 ~~ 168 (353)
T TIGR03235 167 HE 168 (353)
T ss_pred cC
Confidence 75
No 141
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.58 E-value=5.2e-14 Score=128.34 Aligned_cols=130 Identities=20% Similarity=0.268 Sum_probs=107.6
Q ss_pred HHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHC
Q 025730 113 VREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVN 190 (249)
Q Consensus 113 v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~ 190 (249)
-.+++.+ +..+..|+.+...+|++++++++|.+ +++.++|+++++.+++.++ +++||+|++++++|..+...+...
T Consensus 16 e~~~~~~~l~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~~ 93 (379)
T PRK11658 16 ELAAVKEVLRSGWITTGPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVLL 93 (379)
T ss_pred HHHHHHHHHHcCCccCCHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHHc
Confidence 3445444 43434455567899999999999964 6888999999999999998 899999999999999988888899
Q ss_pred CCEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 191 GAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 191 G~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
|++++.++.+ +++.+|+++++++++ .++|+|+ |+|++|... +.+.+.++|+++|
T Consensus 94 G~~~v~vd~~~~~~~~d~~~l~~~i~-~~tkav~---~~~~~G~~~-d~~~i~~~a~~~g 148 (379)
T PRK11658 94 GATPVMVDVDRDTLMVTPEAIEAAIT-PRTKAII---PVHYAGAPA-DLDAIRAIGERYG 148 (379)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHhcc-cCCeEEE---EeCCCCCcC-CHHHHHHHHHHcC
Confidence 9999999975 346799999999998 6899988 677899984 6677788899875
No 142
>PLN02242 methionine gamma-lyase
Probab=99.56 E-value=4.8e-14 Score=130.15 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=98.2
Q ss_pred CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH-----HHCCCEEEEecC
Q 025730 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-----AVNGAAVVKVPR 199 (249)
Q Consensus 125 ~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~-----~~~G~~v~~v~~ 199 (249)
+|+++...+|++.+|+++|. +.+++++|+++++.+++.+++++||+|+++.|.|..+...+ +..|++++.++.
T Consensus 72 r~~~Pt~~~LE~~lA~l~g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~ 149 (418)
T PLN02242 72 RHFNPTVLNLGRQMAALEGT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI 149 (418)
T ss_pred CCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC
Confidence 34677889999999999995 46788999999999999999999999999999998776554 347888887764
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++..++|+|++++|+||||.+. +.+.+.++|++||
T Consensus 150 -----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~-dl~~I~~la~~~g 193 (418)
T PLN02242 150 -----TDLEAVKKAVVPGKTKVLYFESISNPTLTVA-DIPELARIAHEKG 193 (418)
T ss_pred -----CCHHHHHHhcCcCCCEEEEEecCCCCCCccc-CHHHHHHHHHHhC
Confidence 2899999999733599999999999999996 5667777888875
No 143
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.56 E-value=7.6e-14 Score=127.81 Aligned_cols=116 Identities=19% Similarity=0.227 Sum_probs=98.3
Q ss_pred CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHH----HHHHHCCCEEEEecCC
Q 025730 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK 200 (249)
Q Consensus 125 ~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~----~~~~~~G~~v~~v~~~ 200 (249)
+|+++...+|++.+++++|. +++++++|+++++..++.+++++||+|+++.+.|.... ..+...|++++.++.+
T Consensus 57 r~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 134 (390)
T PRK08133 57 RFTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT 134 (390)
T ss_pred CCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC
Confidence 44556688999999999995 46899999999999999999999999999999986432 3456689999999863
Q ss_pred CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 201 ~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
|+++++++++ +++|+|++++|+||||.+. +.+.+.++|+++|
T Consensus 135 -----d~~~l~~~i~-~~tklV~ie~p~NptG~v~-dl~~I~~la~~~g 176 (390)
T PRK08133 135 -----DLDAWRAAVR-PNTKLFFLETPSNPLTELA-DIAALAEIAHAAG 176 (390)
T ss_pred -----CHHHHHHhcC-cCCeEEEEECCCCCCCCcC-CHHHHHHHHHHcC
Confidence 7899999997 7899999999999999995 5677778898875
No 144
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.56 E-value=6.4e-14 Score=126.69 Aligned_cols=143 Identities=14% Similarity=0.068 Sum_probs=113.8
Q ss_pred CCCCCCHHHHHHHHhccCCCC--CCCcChHHHHHHHHHHcCCCC--CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC
Q 025730 105 NPYGPPPEVREALGQLKFPYI--YPDPESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (249)
Q Consensus 105 ~~~~~p~~v~~al~~~~~~~~--Yp~~g~~~lr~~la~~~~~~~--~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y 180 (249)
-|.++++.+.+++........ |. ....++|+.+++++|.++ +.|+++.|+++++..++..+..+||+|+++.++|
T Consensus 12 gP~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~ 90 (368)
T PRK13479 12 GPLTTSRTVREAMLRDWGSWDDDFN-ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGA 90 (368)
T ss_pred CCCCCCHHHHHHhCCCCCCCChHHH-HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCc
Confidence 456677888888865222111 22 246789999999999865 4588999999999999999999999999988887
Q ss_pred hhH--HHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 181 TMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 181 ~~~--~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
... ...++..|++++.++.+.++.+|++++++++++ .++++|+++||+||||..+ +.+.+..+|+++|
T Consensus 91 ~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~l~~~~~ 161 (368)
T PRK13479 91 YGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILN-PLDEIAAVAKRHG 161 (368)
T ss_pred hHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCcccccc-CHHHHHHHHHHcC
Confidence 644 467788999999999877788999999999863 3567899999999999995 5567777888775
No 145
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.55 E-value=8.8e-14 Score=125.76 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc------CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCC
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~------~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~ 204 (249)
..++++.+++++|++++++++++|+++++..++.++. ++||+|++++++|..|...++..|++++.++.+.++.
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~ 140 (373)
T TIGR03812 61 EEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYT 140 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCC
Confidence 3679999999999988899999999999988877653 4779999999999999999999999999999877888
Q ss_pred CCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 205 LNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 205 id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+|+++++++++ +++..++++.|+||||.+ .+.+.+.++|+++|
T Consensus 141 ~d~~~l~~~l~-~~~~~vv~~~~~~~tG~~-~~~~~i~~l~~~~~ 183 (373)
T TIGR03812 141 VDVKDVEDLID-DNTIGIVGIAGTTELGQI-DDIEELSKIALENG 183 (373)
T ss_pred cCHHHHHHHHh-hCcEEEEEECCCCCCCcc-CCHHHHHHHHHHcC
Confidence 99999999997 456544445589999999 46677778888775
No 146
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.55 E-value=6.7e-14 Score=128.48 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=97.4
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHH----HHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~----~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+++++|. +..++++++++++.+++.+++++||+|+++.|+|.... ..+...|+++..++.
T Consensus 59 ~r~~~p~~~~le~~lA~l~g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 136 (398)
T PRK08249 59 SRNTNPTVQAFEEKVRILEGA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET 136 (398)
T ss_pred cCCCChHHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence 356777789999999999994 45677777789999999999999999999999998543 345568998887763
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++|+|++++|+||||.+. +.+.+.++|+++|
T Consensus 137 -----~d~e~l~~~i~-~~tklV~ie~p~NPtg~v~-dl~~I~~la~~~g 179 (398)
T PRK08249 137 -----GDHEQIEAEIA-KGCDLLYLETPTNPTLKIV-DIERLAAAAKKVG 179 (398)
T ss_pred -----CCHHHHHHhcC-CCCeEEEEECCCCCCCccC-CHHHHHHHHHHcC
Confidence 58999999997 6899999999999999996 5666778898875
No 147
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.55 E-value=7.7e-14 Score=126.58 Aligned_cols=134 Identities=18% Similarity=0.162 Sum_probs=107.1
Q ss_pred CCHHHHHHHHhccCCCCCC-CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC---------------e
Q 025730 109 PPPEVREALGQLKFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD---------------K 172 (249)
Q Consensus 109 ~p~~v~~al~~~~~~~~Yp-~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd---------------~ 172 (249)
+|+++.+++.+... ..+. +.-..++++.+++++|. +++++++|+++++.+++.+++++|| +
T Consensus 25 ~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~e 101 (363)
T TIGR01437 25 VSDEVADAQKRGAQ-NYFEIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNE 101 (363)
T ss_pred CCHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccce
Confidence 67899999887321 1122 22356778888888885 4799999999999999999999998 9
Q ss_pred EEEcCCCChhH----HHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEE-EcCCCCccccCCChHHHHHHHhhh
Q 025730 173 IVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGRFSWTSSWIWGISSE 247 (249)
Q Consensus 173 Vlv~~P~y~~~----~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~-l~~PnNPTG~~~~~~e~i~~i~~~ 247 (249)
|+++.|.|..| .......|++++.++. ++.+|+++++++++ +++++++ +++|+||+|.+. +.+.+.++|++
T Consensus 102 Vi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~-~~t~ai~~v~~~~~~~g~~~-~~~~i~~~a~~ 177 (363)
T TIGR01437 102 VVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT-EKTAAILYIKSHHCVQKSML-SVEDAAQVAQE 177 (363)
T ss_pred EEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC-hhceEEEEEecCCCCcCCcC-CHHHHHHHHHH
Confidence 99999888755 5667779999999986 45799999999998 7888766 678999999985 55667889998
Q ss_pred hC
Q 025730 248 HN 249 (249)
Q Consensus 248 ~~ 249 (249)
||
T Consensus 178 ~g 179 (363)
T TIGR01437 178 HN 179 (363)
T ss_pred cC
Confidence 86
No 148
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.55 E-value=6.8e-14 Score=127.04 Aligned_cols=116 Identities=21% Similarity=0.243 Sum_probs=97.4
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++++|+++|.+. .++++|+++++.+++ .++++||+|++++|+|.. +...+...|++++.++.
T Consensus 47 ~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 56788889999999999999754 477788889999876 578999999999999974 34445568999999875
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++|+|++++|+||+|.. .+.+.+.++|+++|
T Consensus 124 -----~d~~~l~~~i~-~~tklv~le~P~NP~~~~-~dl~~I~~la~~~g 166 (366)
T PRK08247 124 -----ASLKAIEQAIT-PNTKAIFIETPTNPLMQE-TDIAAIAKIAKKHG 166 (366)
T ss_pred -----CCHHHHHHhcc-cCceEEEEECCCCCCCcH-HHHHHHHHHHHHcC
Confidence 38899999998 689999999999999987 56777888898875
No 149
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.55 E-value=8e-14 Score=128.15 Aligned_cols=117 Identities=17% Similarity=0.246 Sum_probs=97.2
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+++++|.+ ..+++++++.++.+++.+++++||+|+++.|+|.. +...+...|+++..++.
T Consensus 60 ~r~~~p~~~~le~~lA~l~g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 60 SRISNPTLALLEQRMASLEGGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 4567778899999999999964 35666677889999999999999999999998863 33345568999999976
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+ |+++++++++ +++|+|++++|+||||.+. +.+.+.++|+++|
T Consensus 138 ~-----d~~~l~~~i~-~~tklV~le~p~NPtG~~~-di~~I~~la~~~g 180 (403)
T PRK07503 138 T-----DPAALKAAIS-DKTRMVYFETPANPNMRLV-DIAAVAEIAHGAG 180 (403)
T ss_pred C-----CHHHHHHhcC-ccCcEEEEeCCCCCCCeee-CHHHHHHHHHHcC
Confidence 3 7899999997 6899999999999999995 6677788888875
No 150
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.54 E-value=7.9e-14 Score=127.73 Aligned_cols=117 Identities=15% Similarity=0.206 Sum_probs=97.9
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh----hHHHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~----~~~~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+|+++|.+ ..+++++++.++.+++.+++++||+|+++.|.|. .+...+...|+++..++.
T Consensus 54 ~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 54 SRLGNPTVSNLEGRIAFLEGTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 5678888899999999999964 4677788888999999999999999999999875 344445568999999986
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+ |+++++++++ .++++|++++|+||+|.+. +.+.+.++|+++|
T Consensus 132 ~-----d~e~l~~~i~-~~tklV~le~p~Np~G~v~-dl~~I~~la~~~g 174 (391)
T TIGR01328 132 A-----IPEEVKAHIK-DNTKIVYFETPANPTMKLI-DMERVCRDAHSQG 174 (391)
T ss_pred C-----CHHHHHHhhc-cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcC
Confidence 3 7899999997 6899999999999999995 5666777888875
No 151
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.54 E-value=1.6e-13 Score=125.16 Aligned_cols=132 Identities=20% Similarity=0.306 Sum_probs=105.8
Q ss_pred HHHHHHHHh-ccCCCCCC-CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHH
Q 025730 111 PEVREALGQ-LKFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (249)
Q Consensus 111 ~~v~~al~~-~~~~~~Yp-~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~ 187 (249)
++..+++.+ +..+..+. .+-..++.+.++++++ .+++++|+|++++|.+++.++ ++|||+|++++++|..+...+
T Consensus 11 ~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g--~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~ 88 (376)
T TIGR02379 11 GQELEYIAEAISEGKLSGDGPFSRRCETWLENRTG--TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF 88 (376)
T ss_pred HHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence 334555554 33332332 2235778888888887 468999999999999999887 899999999999999988888
Q ss_pred HHCCCEEEEecCCCC-CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 188 ~~~G~~v~~v~~~~~-~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
...|++++.++.+.+ +.+|+++++++++ .++|+|+ |+||+|... +.+.+.++|++||
T Consensus 89 ~~~G~~~v~vd~d~~~~~~d~~~le~~i~-~~tk~Ii---p~~~~G~~~-d~~~I~~la~~~~ 146 (376)
T TIGR02379 89 VLRGAKIVFVDIRPDTMNIDETLIESAIT-HRTKAIV---PVHYAGVAC-DMDTIMALANKHQ 146 (376)
T ss_pred HHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCCCCcc-CHHHHHHHHHHCC
Confidence 899999999997644 7899999999998 6899987 778899985 6667888898875
No 152
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.54 E-value=1e-13 Score=125.85 Aligned_cols=115 Identities=21% Similarity=0.244 Sum_probs=97.4
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh-hHHHHHHHCCCEEEEecCC--CCCCCCH
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRK--SDFSLNV 207 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~-~~~~~~~~~G~~v~~v~~~--~~~~id~ 207 (249)
..++++.+|+++|++ .+++++|+++++..++.+++++||+|++..+.|. .| ..++..|++++.++.+ .++.+|+
T Consensus 53 ~~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~-~~~~~~g~~~~~~~~~~~~~~~~d~ 129 (370)
T TIGR02539 53 IHDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSY-VAAERAGLNVKEVPHTGHPEYKVDP 129 (370)
T ss_pred HHHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHH-HHHHHcCCEEEEEecCCcccCCcCH
Confidence 578899999999975 5677899999999999999999999999888854 55 5678899999999964 3588999
Q ss_pred HHHHHhhcc------CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 208 ELIADAVER------EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 208 e~l~~~i~~------~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+++++++++ .++++|++++|+||||.. .+.+.+..+|+++|
T Consensus 130 ~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~-~~l~~i~~la~~~~ 176 (370)
T TIGR02539 130 EGYGEVIEEVEDESGKPPVLALLTHVDGEYGNL-PDAGKVAKVCREKG 176 (370)
T ss_pred HHHHHHHHHhhhccCCCcEEEEEECCCCCCccc-cCHHHHHHHHHHcC
Confidence 999999863 268899999999999998 46667777898875
No 153
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.54 E-value=1.2e-13 Score=126.82 Aligned_cols=145 Identities=13% Similarity=0.117 Sum_probs=112.9
Q ss_pred CCCCCCCHHHHHHHHhccCCCCCCC--cChHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC
Q 025730 104 ENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (249)
Q Consensus 104 ~~~~~~p~~v~~al~~~~~~~~Yp~--~g~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y 180 (249)
-.|...++.+.+++......++.+. .-..++++.+++++|.+. +.+++++|+++++..++..++++||+|++.++.|
T Consensus 15 pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~ 94 (401)
T PLN02409 15 PGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQ 94 (401)
T ss_pred CCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 4455677889998876222122221 125667788888889865 4678899999999999999999999999999988
Q ss_pred hh--HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---CCceEEEEcCCCCccccCCChHHHHHHH--hhhhC
Q 025730 181 TM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGRFSWTSSWIWGI--SSEHN 249 (249)
Q Consensus 181 ~~--~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~e~i~~i--~~~~~ 249 (249)
.. |...++..|++++.++.+.+..+|++++++++++ +++|+|++++++||||.++ +.+.+..+ |+++|
T Consensus 95 ~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~g 169 (401)
T PLN02409 95 FSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTN-DLAGVRKLLDCAQHP 169 (401)
T ss_pred hhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccC-CHHHHHHHHhhhccC
Confidence 53 4567788999999999766667899999999984 3799999999999999996 56666677 77764
No 154
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.54 E-value=1.3e-13 Score=126.09 Aligned_cols=117 Identities=19% Similarity=0.208 Sum_probs=95.2
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh-HHHHHH---HCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDAA---VNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~-~~~~~~---~~G~~v~~v~~ 199 (249)
.+|+++...+|++++|+++|.+. .+ +++++++++.+++.+++++||+|+++.|+|.. +..... ..|+++..++.
T Consensus 56 ~r~~~p~~~~Le~~lA~~~g~~~-~i-~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 56 ARTGNPTRTALEEQLAALEGGAY-GR-AFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred cCCCCccHHHHHHHHHHHhCCCc-eE-EeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 45677889999999999999653 34 44566899999999999999999999999984 333332 25888887764
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++|+|++++|+||||.+ .+.+.+..+|+++|
T Consensus 134 -----~d~e~l~~~i~-~~tklV~ie~p~NPtg~~-~dl~~I~~la~~~g 176 (388)
T PRK07811 134 -----SDLDAVRAAIT-PRTKLIWVETPTNPLLSI-TDIAALAELAHDAG 176 (388)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCccee-cCHHHHHHHHHHcC
Confidence 48999999998 689999999999999998 56777788898875
No 155
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.54 E-value=1.1e-13 Score=127.03 Aligned_cols=143 Identities=17% Similarity=0.237 Sum_probs=107.1
Q ss_pred eeeccCCCCCCCCCHHHHHHHHhc--cC-CCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeE
Q 025730 97 IVKIDANENPYGPPPEVREALGQL--KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (249)
Q Consensus 97 ~I~L~~~~~~~~~p~~v~~al~~~--~~-~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~V 173 (249)
.|.++.... ++.+..+.+..... .+ ..+|+++...+|++.+|+++|.+.. +++++++.++..++.+++++||+|
T Consensus 31 pi~~~~~~~-~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~l~~Gd~V 107 (398)
T PRK07504 31 ALFLTQGFV-YDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDA--RATASGMAAVTAAILCQVKAGDHV 107 (398)
T ss_pred CeECCCCcc-CCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHHhCCCCEE
Confidence 366665433 33444444333211 11 2567888899999999999997643 346677788888888889999999
Q ss_pred EEcCCCChhHHHH----HHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 174 VDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 174 lv~~P~y~~~~~~----~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+++.|.|..+... +...|++++.++ .+|+++++++++ +++|+|+++||+||||.++ +.+.+.++|+++|
T Consensus 108 l~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~-~~tklV~lesp~NptG~v~-dl~~I~~la~~~g 180 (398)
T PRK07504 108 VAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVR-PNTKVFFLESPTNPTLEVI-DIAAVAKIANQAG 180 (398)
T ss_pred EEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCcEec-CHHHHHHHHHHcC
Confidence 9999999865433 345799988885 378999999997 7899999999999999996 5667777888875
No 156
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.53 E-value=1.7e-13 Score=120.83 Aligned_cols=123 Identities=16% Similarity=0.137 Sum_probs=102.9
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC--C
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--S 201 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~--~ 201 (249)
..+|+.-..++++.+|+++|.+ +-+++++|+++++..++.+++++||+|+++.++|......+...|++++.++.+ .
T Consensus 54 l~~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 54 LLDPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence 3457666889999999999964 345559999999999999999999999999999998888888899999999743 2
Q ss_pred C----CCCCHHHHHHhhcc-CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 202 D----FSLNVELIADAVER-EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 202 ~----~~id~e~l~~~i~~-~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+ +.+|++++++++++ .++++|++++| |++|.++ +.+.+.++|+++|
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~-dl~~I~~~~~~~g 183 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICY-NLRKIVEEAHHRG 183 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEec-CHHHHHHHHHhcC
Confidence 2 37899999999963 47899999999 6999996 5677888888875
No 157
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.53 E-value=2e-13 Score=125.56 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=98.7
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC----hhHHHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y----~~~~~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+|+++|. ++.+++++++.++..++.+++++||+|+++...| ..+...++..|++++.++.
T Consensus 65 ~r~~~p~~~~le~~lA~l~g~--~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEGA--EACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCC--CcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 567888889999999999994 4677788888999999988999999999887554 4555667778999999974
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++++|++++|+||||.+. +.+.+..+|+++|
T Consensus 143 -----~d~~~l~~ai~-~~tklV~~esp~Nptg~v~-dl~~I~~la~~~g 185 (403)
T PRK07810 143 -----EDLSQWEEALS-VPTQAVFFETPSNPMQSLV-DIAAVSELAHAAG 185 (403)
T ss_pred -----CCHHHHHHhcC-cCceEEEEECCCCCCCeec-CHHHHHHHHHHcC
Confidence 38999999998 6899999999999999995 6777788888875
No 158
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.53 E-value=3.3e-13 Score=120.88 Aligned_cols=148 Identities=19% Similarity=0.218 Sum_probs=112.7
Q ss_pred CCCCeeeccCCCCCCC--CCHHHHHHHHh-ccC-CCC-------CCC-cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 025730 93 KPEDIVKIDANENPYG--PPPEVREALGQ-LKF-PYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELID 160 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~--~p~~v~~al~~-~~~-~~~-------Yp~-~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~ 160 (249)
.+.++|||+.| ++++ .++.+++++.+ +.. ... |+. ....+++++++++++. +++|++++|+.+.+
T Consensus 14 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G~~~~~- 90 (360)
T TIGR00858 14 DGRRLLNFSSN-DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSGYLANV- 90 (360)
T ss_pred CCceEEecccC-CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECchHHHHH-
Confidence 45678999998 4544 45888888875 321 111 111 1256799999999984 56888888865555
Q ss_pred HHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---CCceEEEEcCCCCccccCCCh
Q 025730 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 161 ~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~ 237 (249)
.++.+++++||+|+++.|+|..+...++..|++++.++. +|++.+++.+++ .++++|++++++||||... +
T Consensus 91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~-~ 164 (360)
T TIGR00858 91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA-P 164 (360)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc-C
Confidence 567778899999999999999999888999999988863 588999998864 2478888889999999885 5
Q ss_pred HHHHHHHhhhhC
Q 025730 238 SSWIWGISSEHN 249 (249)
Q Consensus 238 ~e~i~~i~~~~~ 249 (249)
.+.+.++|+++|
T Consensus 165 ~~~i~~l~~~~~ 176 (360)
T TIGR00858 165 LPQLVALAERYG 176 (360)
T ss_pred HHHHHHHHHHcC
Confidence 566777888875
No 159
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.52 E-value=3e-13 Score=121.05 Aligned_cols=142 Identities=11% Similarity=0.085 Sum_probs=111.8
Q ss_pred CCCCCHHHHHHHHh-ccCC-CCCCCcChHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC-C
Q 025730 106 PYGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPT-F 180 (249)
Q Consensus 106 ~~~~p~~v~~al~~-~~~~-~~Yp~~g~~~lr~~la~~~~~~~~--~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~-y 180 (249)
|..+++.+.+++.. .... ..|+ ....++|+.+++++|++++ .|+++.|+++++..++..++.+||++++..+. |
T Consensus 7 p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~ 85 (355)
T TIGR03301 7 PLSTSATVRDAMLVDWCHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAY 85 (355)
T ss_pred CCCCCHHHHHHhhhhccCCCHHHH-HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCch
Confidence 55677888888876 2111 1233 2367899999999998765 57789999999999999999888887766555 5
Q ss_pred hh-HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 181 TM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 181 ~~-~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.. +...++..|.+++.++.++++.+|++++++++++ .+++++++++++||||.+. +.+.+..+|++||
T Consensus 86 ~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~ 155 (355)
T TIGR03301 86 GERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILN-PLEAIAKVARSHG 155 (355)
T ss_pred hhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchh-HHHHHHHHHHHcC
Confidence 43 5667788999999999877789999999999863 3567888899999999995 5677888888875
No 160
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.52 E-value=4.7e-13 Score=122.56 Aligned_cols=136 Identities=17% Similarity=0.147 Sum_probs=105.4
Q ss_pred CCCCCCHHHHHHHHh-ccCCCCCC---CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC
Q 025730 105 NPYGPPPEVREALGQ-LKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (249)
Q Consensus 105 ~~~~~p~~v~~al~~-~~~~~~Yp---~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y 180 (249)
..++.++.+.++... ....+.|. +++...|++++|++.+ .+++++++|+++++..++.+++++||+|++++|.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~--~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y 110 (394)
T PRK09028 33 VVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEG--GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCY 110 (394)
T ss_pred cccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 345556666665543 21224453 3456799999999986 35799999999999999999999999999999999
Q ss_pred hhHHHHH----HHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 181 TMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 181 ~~~~~~~----~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..+...+ ...|+++..++.. |.+.++++++ +++|+|++++|+||||.+ .+.+.+.++|+++|
T Consensus 111 ~~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~-~~TklV~lespsNPtg~v-~dl~~I~~la~~~g 176 (394)
T PRK09028 111 EPTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIR-PNTKVLFLESPGSITMEV-QDVPTLSRIAHEHD 176 (394)
T ss_pred HHHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcH-HHHHHHHHHHHHcC
Confidence 7665433 4478888877642 4578988887 789999999999999999 56777888898875
No 161
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.51 E-value=2.8e-13 Score=123.60 Aligned_cols=117 Identities=18% Similarity=0.248 Sum_probs=100.0
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+++++|. +.+++++++++++..++.+++++||+|+++.+.|.. +...++..|+++..++.
T Consensus 49 ~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred ecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 567777889999999999986 567889999999999999999999999999988853 44456678999999976
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+ |+++++++++ .++|+|++++|+||+|.+. +.+.+.++|+++|
T Consensus 127 ~-----d~~~l~~~i~-~~tklV~le~p~np~g~~~-dl~~I~~la~~~g 169 (380)
T TIGR01325 127 T-----DLNAWEAAVK-PNTKLVFVETPSNPLGELV-DIAALAELAHAIG 169 (380)
T ss_pred C-----CHHHHHHhcC-CCceEEEEECCCCCCCeee-CHHHHHHHHHHcC
Confidence 3 7899999987 6899999999999999995 6677788888875
No 162
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=4.4e-13 Score=123.93 Aligned_cols=114 Identities=16% Similarity=0.114 Sum_probs=98.9
Q ss_pred CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHH----HHHCCCEEEEecCCCCC
Q 025730 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDF 203 (249)
Q Consensus 128 ~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~----~~~~G~~v~~v~~~~~~ 203 (249)
.+....|++.++++.|. ...+++++++.+|.+++.+++++||+|+++.++|...... ....|+++..++.
T Consensus 60 nPtv~~lE~~la~leg~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~---- 133 (432)
T PRK06702 60 NPTLAAFEQKLAELEGG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP---- 133 (432)
T ss_pred CcHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC----
Confidence 56688999999999984 4688899999999999999999999999999999754443 5668999999853
Q ss_pred CCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 204 SLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 204 ~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.+|+++++++++ +++|+|++.+|+||+|.+. +.+.+.++|++||
T Consensus 134 ~~d~~~l~~~I~-~~Tk~I~~e~pgnP~~~v~-Di~~I~~iA~~~g 177 (432)
T PRK06702 134 NLTADEIVALAN-DKTKLVYAESLGNPAMNVL-NFKEFSDAAKELE 177 (432)
T ss_pred CCCHHHHHHhCC-cCCeEEEEEcCCCcccccc-CHHHHHHHHHHcC
Confidence 478999999998 7999999999999999995 6788888999886
No 163
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.50 E-value=5.7e-13 Score=120.30 Aligned_cols=139 Identities=17% Similarity=0.215 Sum_probs=111.3
Q ss_pred CCHHHHHHHHh-cc----CCCCCCCcC--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC----CCCeEEEcC
Q 025730 109 PPPEVREALGQ-LK----FPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PGDKIVDCP 177 (249)
Q Consensus 109 ~p~~v~~al~~-~~----~~~~Yp~~g--~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~----pGd~Vlv~~ 177 (249)
+.+.+.+++.+ .. ....|+... ..++++.+++++|++.+++++++|+++++..++..+.. +||+|++.+
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~ 111 (371)
T PRK13520 32 PHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPE 111 (371)
T ss_pred chHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecC
Confidence 44666677654 21 112233221 26799999999998877899999999999998876643 579999999
Q ss_pred CCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 178 PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 178 P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++|..+...++..|++++.++.++++.+|+++++++++ +++++|++++++|+||.+. +.+.+..+|+++|
T Consensus 112 ~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~vi~~~~~~~tG~~~-~l~~I~~l~~~~g 181 (371)
T PRK13520 112 SAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-DNTIGIVGIAGTTELGQVD-PIPELSKIALENG 181 (371)
T ss_pred cchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-hCCEEEEEEcCCcCCcccC-CHHHHHHHHHHcC
Confidence 99999988888899999999987778899999999997 5788888889999999995 6777888898875
No 164
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.50 E-value=3.4e-13 Score=124.56 Aligned_cols=117 Identities=19% Similarity=0.206 Sum_probs=99.9
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+|+++|. +..++++++++++..++.+++++||+|++..+.|.. |...+...|++++.++.
T Consensus 52 sr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 52 SRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred ECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 566777789999999999995 467888999999999999999999999999999853 34456678999999985
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+ |+++++++++ .++++|++++|+||||.+. +.+.+.++|+++|
T Consensus 130 ~-----d~~~l~~~l~-~~t~~V~le~p~NPtg~v~-dl~~I~~la~~~~ 172 (418)
T TIGR01326 130 D-----DPEEFEKAID-ENTKAVFAETIGNPAINVP-DIEAIAEVAHAHG 172 (418)
T ss_pred C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcC
Confidence 2 8999999997 6899999999999999995 5677778898875
No 165
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.50 E-value=4.5e-13 Score=122.53 Aligned_cols=117 Identities=21% Similarity=0.147 Sum_probs=97.0
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH---HHCCCEEEEecCC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRK 200 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~---~~~G~~v~~v~~~ 200 (249)
.+|+++...+|++.+|+++|. +++++++|++.++..++.+++++||+|+++.|.|..+...+ ...|+++..+.
T Consensus 48 ~r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-- 123 (385)
T PRK08574 48 SREENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-- 123 (385)
T ss_pred ECCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--
Confidence 355677889999999999994 57888899999999999999999999999999998766554 44688777653
Q ss_pred CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 201 ~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+|++++++++++.++|+|++++|+||||.+++ .+.+.++|+++|
T Consensus 124 ----~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d-l~~I~~la~~~g 167 (385)
T PRK08574 124 ----PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID-VPEVAKAAKELG 167 (385)
T ss_pred ----CCHHHHHHhcCccCceEEEEECCCCCCCEecC-HHHHHHHHHHcC
Confidence 36899999997338999999999999999965 556777888875
No 166
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.49 E-value=7.5e-13 Score=122.66 Aligned_cols=116 Identities=20% Similarity=0.251 Sum_probs=97.9
Q ss_pred CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecCC
Q 025730 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK 200 (249)
Q Consensus 125 ~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~~ 200 (249)
+++++....|.+.++++.| .++.++++|++.++..++..++++||+|+++.+.|.. +...++..|++++.++.
T Consensus 60 r~~~p~~~~Le~~lA~leg--~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~- 136 (431)
T PRK08248 60 RIMNPTTDVFEKRIAALEG--GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP- 136 (431)
T ss_pred CCCCchHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-
Confidence 3456678899999999999 4577888999999999999999999999999998863 34456679999999975
Q ss_pred CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 201 ~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++++|++++|+||||.++ +.+.+.++|+++|
T Consensus 137 ----~d~e~l~~ai~-~~tklV~l~sp~NPtG~v~-di~~I~~la~~~g 179 (431)
T PRK08248 137 ----SDPENFEAAIT-DKTKALFAETIGNPKGDVL-DIEAVAAIAHEHG 179 (431)
T ss_pred ----CCHHHHHHhcC-CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcC
Confidence 38899999998 6899999999999999996 4567778888875
No 167
>PRK06460 hypothetical protein; Provisional
Probab=99.49 E-value=4.4e-13 Score=122.21 Aligned_cols=116 Identities=16% Similarity=0.150 Sum_probs=90.1
Q ss_pred CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC----hhHHHHHHHCCCEEEEecCC
Q 025730 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPRK 200 (249)
Q Consensus 125 ~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y----~~~~~~~~~~G~~v~~v~~~ 200 (249)
++.++...+|++++|+++|.+. .+++++ +++++..++.+++++||+|+++.|.| ..|...++..|+++..++.+
T Consensus 41 r~~~p~~~~L~~~lA~l~g~~~-~v~~~s-G~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~ 118 (376)
T PRK06460 41 REANPTVLELTKKIVELENAEM-GVAFSS-GMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG 118 (376)
T ss_pred CCCCccHHHHHHHHHHHhCCCc-EEEeCC-HHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC
Confidence 3356778999999999999754 455544 46899999999999999999997654 46667778899999988753
Q ss_pred CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 201 ~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+ .+.+++.++ +++|+|+++|||||||.+++. +.+.++|+++|
T Consensus 119 ~-----~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~-~~I~~la~~~g 160 (376)
T PRK06460 119 S-----DNIIEKAKS-KRYDVVFVENITNPLLRVVDI-TELSKVCKENG 160 (376)
T ss_pred C-----HHHHHHhcC-CCceEEEEECCCCCCCcccCH-HHHHHHHHHcC
Confidence 2 234444444 689999999999999999655 55677888875
No 168
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.49 E-value=4.4e-13 Score=122.57 Aligned_cols=117 Identities=14% Similarity=0.098 Sum_probs=92.2
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHH----HHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~----~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+|+++|.+ +.+++ ++++.++..++.+++++||+|+++.|.|...... ....|+++..++.
T Consensus 56 ~r~~~pt~~~Le~~lA~l~G~~-~al~~-~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 56 SRLGNPTVKLFEERMAVLEGGE-EALAF-GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred cCCCCcchHHHHHHHHHHhCCC-cEEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 5678888899999999999953 44444 5556799999999999999999999988744333 3345666666543
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++|+|++++|+||||.++ +.+.+..+|+++|
T Consensus 134 -----~d~~~l~~~i~-~~tklV~lesp~NptG~v~-dl~~I~~la~~~g 176 (386)
T PRK06767 134 -----ETEADIENKIR-PNTKLIFVETPINPTMKLI-DLKQVIRVAKRNG 176 (386)
T ss_pred -----CCHHHHHHhhC-cCceEEEEeCCCCCCceec-CHHHHHHHHHHcC
Confidence 37899999997 6899999999999999996 4566777888775
No 169
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.48 E-value=5.4e-13 Score=122.18 Aligned_cols=113 Identities=17% Similarity=0.230 Sum_probs=91.8
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh-hH---HHHHHHCCCEEEEecCCCC
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MY---EFDAAVNGAAVVKVPRKSD 202 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~-~~---~~~~~~~G~~v~~v~~~~~ 202 (249)
.++...+|++.+|+++|.+ +.+++++| +.++.+++. ++++||+|+++.|.|. .| ...++..|++++.++..
T Consensus 52 ~~p~~~~le~~lA~l~g~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-- 126 (390)
T PRK08064 52 GNPTREALEDIIAELEGGT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT-- 126 (390)
T ss_pred CChhHHHHHHHHHHHhCCC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC--
Confidence 3456789999999999976 46666666 568888876 7899999999999996 33 34456689999999863
Q ss_pred CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 ~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
|+++++++++ +++|+|++++|+||||.+. +.+.+.++|+++|
T Consensus 127 ---d~~~l~~~l~-~~tklV~l~~p~NptG~~~-dl~~I~~la~~~g 168 (390)
T PRK08064 127 ---NLEEVAQNIK-PNTKLFYVETPSNPLLKVT-DIRGVVKLAKAIG 168 (390)
T ss_pred ---CHHHHHHhcC-CCceEEEEECCCCCCcEec-cHHHHHHHHHHcC
Confidence 7899999997 6899999999999999995 6667778888875
No 170
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.48 E-value=1.3e-12 Score=118.92 Aligned_cols=129 Identities=20% Similarity=0.283 Sum_probs=103.2
Q ss_pred HHHHHh-ccCCCCCCCcC-hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHC
Q 025730 114 REALGQ-LKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVN 190 (249)
Q Consensus 114 ~~al~~-~~~~~~Yp~~g-~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~ 190 (249)
.+++.+ +..+..|+... ..++.+.+++++|. +++++++|++++|.+++..+ +++||+|+++.|+|..+...+...
T Consensus 14 ~~~~~~~l~~~~~~g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~ 91 (375)
T PRK11706 14 LDYIQQAMSSGKLCGDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR 91 (375)
T ss_pred HHHHHHHHHcCCccCCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc
Confidence 444444 34444555433 46778888988885 68999999999999987765 789999999999999999999999
Q ss_pred CCEEEEecCCCC-CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 191 GAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 191 G~~v~~v~~~~~-~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
|++++.++.+.+ +.+|+++++++++ .++|+|+++ |++|.. .+.+.+.++|+++|
T Consensus 92 G~~~v~~d~d~~~~~~d~~~le~~i~-~~tk~i~~~---~~~G~~-~~~~~i~~la~~~~ 146 (375)
T PRK11706 92 GAKIVFVDIRPDTMNIDETLIEAAIT-PKTRAIVPV---HYAGVA-CEMDTIMALAKKHN 146 (375)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHhcC-CCCeEEEEe---CCCCCc-cCHHHHHHHHHHcC
Confidence 999999997544 6799999999998 689999976 469988 45667788888875
No 171
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.48 E-value=1.4e-12 Score=118.63 Aligned_cols=149 Identities=16% Similarity=0.130 Sum_probs=114.5
Q ss_pred CCCCeeeccCCC-CCCCCCHHHHHHHHh-cc-CCCCCCC----cCh----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-FPYIYPD----PES----RRLRAALAKDSGLESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~-~~~~~p~~v~~al~~-~~-~~~~Yp~----~g~----~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~ 161 (249)
.+.++|+|..++ +.+++++.+.+++.+ +. ....|+. .|. .++++.++++++.+ ++|++|+| ++++..
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~ 117 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGG 117 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHH
Confidence 345789999987 577788888888765 32 2233321 243 45667777777864 67888888 678888
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---C--CceEEEEcCCCCccccCCC
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~--~~k~i~l~~PnNPTG~~~~ 236 (249)
+++++++|||+|++++|+|..+...++..|++++.++. .|++++++.+++ . ++++|++.+.+|+||.. .
T Consensus 118 ~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~-~ 191 (397)
T PRK06939 118 LFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDI-A 191 (397)
T ss_pred HHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCc-C
Confidence 89999999999999999999998888889999888764 478888887753 2 67788877789999987 5
Q ss_pred hHHHHHHHhhhhC
Q 025730 237 TSSWIWGISSEHN 249 (249)
Q Consensus 237 ~~e~i~~i~~~~~ 249 (249)
+.+.+.++|++||
T Consensus 192 ~~~~l~~la~~~~ 204 (397)
T PRK06939 192 PLPEICDLADKYD 204 (397)
T ss_pred CHHHHHHHHHHhC
Confidence 6677888899875
No 172
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.48 E-value=7.3e-13 Score=120.82 Aligned_cols=116 Identities=21% Similarity=0.267 Sum_probs=92.9
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh-hHHHH---HHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFD---AAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~-~~~~~---~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+++++|.+ ..+++++| +.++..++ .++++||+|+++.|+|. .|... +...|++++.++.
T Consensus 45 ~r~~~p~~~~Le~~lA~l~g~~-~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 45 SRTGNPTRAALEELIAVLEGGH-AGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-ceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 4567777899999999999964 35666666 56777665 57899999999999997 55443 3447999999874
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++|+|++++|+||||.+ .+.+.+.++|+++|
T Consensus 122 -----~d~~~l~~ai~-~~tklV~le~P~NPtg~~-~dl~~I~~la~~~g 164 (377)
T PRK07671 122 -----SNLEEVEEAIR-PNTKAIYVETPTNPLLKI-TDIKKISTIAKEKG 164 (377)
T ss_pred -----CCHHHHHHhcC-CCCeEEEEECCCCCCCcc-cCHHHHHHHHHHcC
Confidence 38999999998 689999999999999998 46677777888875
No 173
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.48 E-value=7.7e-13 Score=120.69 Aligned_cols=113 Identities=24% Similarity=0.326 Sum_probs=93.8
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHH----HHHHCCCEEEEecCCCC
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD 202 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~----~~~~~G~~v~~v~~~~~ 202 (249)
+.+...+|++.+++++|. ++++++++++.++.+++. ++++||+|+++++.|..+.. .+...|++++.++..
T Consensus 45 ~~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 119 (378)
T TIGR01329 45 GNPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT-- 119 (378)
T ss_pred CChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC--
Confidence 344578899999999996 566777777889998776 78999999999999986543 345589999999862
Q ss_pred CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 ~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
|+++++++++ +++|+|++++|+||||.+. +.+.+.++|+++|
T Consensus 120 ---d~~~le~~i~-~~tklv~le~psnptg~v~-dl~~I~~la~~~g 161 (378)
T TIGR01329 120 ---DLDKVKAALG-PKTKLVLLESPTNPLQKIV-DIRKISEMAHAQN 161 (378)
T ss_pred ---CHHHHHHhcC-cCceEEEEECCCCCCCeee-cHHHHHHHHHHcC
Confidence 7899999998 7899999999999999995 6777788898875
No 174
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.47 E-value=1e-12 Score=104.58 Aligned_cols=118 Identities=18% Similarity=0.148 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHH-HHHHHCCCEEEEecCCCCCCCC--H
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGAAVVKVPRKSDFSLN--V 207 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~-~~~~~~G~~v~~v~~~~~~~id--~ 207 (249)
..++++.++++++.+.+++++++|+++++.++++++.++|++|+++.++|.... ..++..|+++..++.+.+...+ +
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 468999999999766889999999999999999999888999999999998766 7778899999999865443333 3
Q ss_pred HHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 208 ELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 208 e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.+++.....+++++++++++||+|..++. +.+.++|+++|
T Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~-~~l~~~~~~~~ 122 (170)
T cd01494 82 AILEELKAKPNVALIVITPNTTSGGVLVPL-KEIRKIAKEYG 122 (170)
T ss_pred hhhhhccccCceEEEEEecCcCCCCeEcCH-HHHHHHHHHcC
Confidence 366555544789999999999999998644 67777888775
No 175
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.47 E-value=8.1e-13 Score=119.37 Aligned_cols=142 Identities=13% Similarity=0.017 Sum_probs=110.0
Q ss_pred CCCCCHHHHHHHHhccCCCCCCC--cChHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh
Q 025730 106 PYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (249)
Q Consensus 106 ~~~~p~~v~~al~~~~~~~~Yp~--~g~~~lr~~la~~~~~~~~--~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~ 181 (249)
|...++.+.+++.... .++-+. .-..++|+.+++++|.+++ .|++|.|+++++..++.+++.+||++++..+.+.
T Consensus 11 p~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~ 89 (363)
T TIGR02326 11 PLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAY 89 (363)
T ss_pred CCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChh
Confidence 4445677777776521 121111 1256789999999999764 6999999999999999999999998887666654
Q ss_pred hH--HHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 182 MY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 182 ~~--~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.. ...++..|.+++.++.++++.+|+++++++++. .+++++++++++||||..+ +.+.+.++|++||
T Consensus 90 ~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~-~i~~I~~l~~~~g 159 (363)
T TIGR02326 90 GARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILN-PIEAVAKLAHRHG 159 (363)
T ss_pred hHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccC-cHHHHHHHHHHcC
Confidence 33 466788999999999877888999999999874 3567888999999999996 5677888888875
No 176
>PRK05939 hypothetical protein; Provisional
Probab=99.46 E-value=1.8e-12 Score=118.94 Aligned_cols=113 Identities=19% Similarity=0.209 Sum_probs=93.2
Q ss_pred CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHH---HHHHHCCCEEEEecCCCCCC
Q 025730 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFS 204 (249)
Q Consensus 128 ~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~---~~~~~~G~~v~~v~~~~~~~ 204 (249)
++...+|++.++++.|.. ..+++++++.++..++.+++++||+|+++++.|+.+. ..++..|++++.++.
T Consensus 46 ~p~~~~lE~~la~leg~~--~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~----- 118 (397)
T PRK05939 46 TPTTAALEAKITKMEGGV--GTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA----- 118 (397)
T ss_pred CHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-----
Confidence 344668999999999853 3455555689999999999999999999999997432 345568999999975
Q ss_pred CCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 205 LNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 205 id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++|+|++++|+||||.+ .+.+.+..+|+++|
T Consensus 119 ~d~e~l~~~l~-~~tklV~vesp~NptG~v-~dl~~I~~la~~~g 161 (397)
T PRK05939 119 TDVQNVAAAIR-PNTRMVFVETIANPGTQV-ADLAGIGALCRERG 161 (397)
T ss_pred CCHHHHHHhCC-CCCeEEEEECCCCCCCCH-HhHHHHHHHHHHcC
Confidence 27899999997 789999999999999999 57777888999875
No 177
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.46 E-value=3.5e-13 Score=122.39 Aligned_cols=117 Identities=16% Similarity=0.141 Sum_probs=92.4
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCE-EEEecCCCC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKSD 202 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~-v~~v~~~~~ 202 (249)
.+|+++...+|++++|++.+ .+++++++|+++++.+++. ++++||+|+++.+.|......+...... -+.+ .
T Consensus 49 ~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~----~ 121 (364)
T PRK07269 49 TRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF----T 121 (364)
T ss_pred eCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----E
Confidence 56788889999999999998 6799999999999999995 6799999999999997433332221000 0111 2
Q ss_pred CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 ~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+..|+++++++++ +++|+|++++|+||||.+. +.+.+.++|+++|
T Consensus 122 ~~~d~~~l~~~i~-~~TklV~lesP~NPtg~~~-di~~I~~la~~~g 166 (364)
T PRK07269 122 YANTEEELIAAIE-EDTDIVYIETPTNPLMVEF-DIEKVAKLAHAKG 166 (364)
T ss_pred ecCCHHHHHHhcC-cCceEEEEECCCCCCCeee-CHHHHHHHHHHcC
Confidence 3468999999998 6899999999999999984 6777778888875
No 178
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.46 E-value=7.8e-13 Score=120.17 Aligned_cols=113 Identities=22% Similarity=0.218 Sum_probs=89.6
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH----HHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~----~~~G~~v~~v~~ 199 (249)
.+||++...+|++++++++ ..+ .+++.++++++..++.+++++||+|++++|+|..+...+ ...|++++.++.
T Consensus 46 ~ry~~p~~~~Le~~lA~l~--~~~-~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 46 GRASNPTWRALEAALGELE--GAE-ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred ECCCCccHHHHHHHHHHHc--CCC-EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 6789999999999999999 344 455555567999999999999999999999998776644 347999999986
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++++ + .+. .++++|++++|+||||.+. +.+.+.++|+++|
T Consensus 123 ~~~~----~----~~~-~~t~lV~le~p~NPtg~v~-di~~I~~~a~~~g 162 (366)
T PRK07582 123 AGMA----E----AAL-AGADLVLAETPSNPGLDVC-DLAALAAAAHAAG 162 (366)
T ss_pred CChH----H----Hhc-cCceEEEEECCCCCCCCcc-CHHHHHHHHHHcC
Confidence 4321 1 222 5789999999999999884 6677788888765
No 179
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.45 E-value=2.7e-12 Score=116.19 Aligned_cols=149 Identities=16% Similarity=0.133 Sum_probs=110.2
Q ss_pred CCCCeeeccCCCCC-CCCCHHHHHHHHh-ccC-CC---CC-----CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANENP-YGPPPEVREALGQ-LKF-PY---IY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~~-~~~p~~v~~al~~-~~~-~~---~Y-----p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~ 161 (249)
.+.++|||..+++. +.+++.+.+++.+ +.. .. .| +.....+++++++++++. ++.|++++ +++++..
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~-g~~~~~~ 114 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ERALLFSS-GYAANLA 114 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEECc-HHHHHHH
Confidence 35678999999763 4567888888875 321 11 11 122357899999999983 44555554 5566666
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccC--CceEEEEcCCCCccccCCChHH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~--~~k~i~l~~PnNPTG~~~~~~e 239 (249)
++..++++||+|++++|+|..+...+...|.+++.++. .|++.+++.++.. ++.++++.+++||||.. .+.+
T Consensus 115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~-~~l~ 188 (385)
T PRK05958 115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDL-APLA 188 (385)
T ss_pred HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCc-CCHH
Confidence 77888999999999999999999888889999988874 3789999988642 35566666789999988 4567
Q ss_pred HHHHHhhhhC
Q 025730 240 WIWGISSEHN 249 (249)
Q Consensus 240 ~i~~i~~~~~ 249 (249)
.+.++|++||
T Consensus 189 ~i~~ia~~~~ 198 (385)
T PRK05958 189 ELVALARRHG 198 (385)
T ss_pred HHHHHHHHhC
Confidence 7888999875
No 180
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.45 E-value=2.2e-12 Score=117.45 Aligned_cols=117 Identities=20% Similarity=0.221 Sum_probs=98.5
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCCC
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFS 204 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~~ 204 (249)
..+...+|++++++++|.+ +.++++|+++++.+++.++ +++||+|+++.|+|..+...++..|++++.++.+ +++.
T Consensus 27 ~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 104 (380)
T TIGR03588 27 QGPTVPAFEEALAEYVGAK--YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGN 104 (380)
T ss_pred CChhHHHHHHHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCC
Confidence 3456789999999999963 5667778999999999998 8899999999999999988888999999999974 4678
Q ss_pred CCHHHHHHhhcc---CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 205 LNVELIADAVER---EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 205 id~e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+|++++++++++ .++++|++ +|++|.. .+.+.+.++|++||
T Consensus 105 ~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~-~~~~~i~~l~~~~~ 148 (380)
T TIGR03588 105 IDEDALEKKLAAAKGKLPKAIVP---VDFAGKS-VDMQAIAALAKKHG 148 (380)
T ss_pred cCHHHHHHHhhcccCCCceEEEE---eCCCCcc-CCHHHHHHHHHHcC
Confidence 999999999973 47899885 4568988 45677788898875
No 181
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.45 E-value=1.7e-12 Score=116.11 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=105.6
Q ss_pred HHHHHHHh-cc-CCCCCC-CcChHHHHHHHHHH----cCCC--CCCEEEeCCHHHHHHHHHHHhcC------------CC
Q 025730 112 EVREALGQ-LK-FPYIYP-DPESRRLRAALAKD----SGLE--SDHILVGCGADELIDLIMRCVLD------------PG 170 (249)
Q Consensus 112 ~v~~al~~-~~-~~~~Yp-~~g~~~lr~~la~~----~~~~--~~~I~vt~Ga~~~l~~~~~~~~~------------pG 170 (249)
.+.+.+.. .. ....|. .++..+++++++++ +|++ .+++++|+|+++++.+++.++.. +|
T Consensus 14 ~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~ 93 (345)
T cd06450 14 LLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGI 93 (345)
T ss_pred HHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccccc
Confidence 34444543 22 223463 45666777776555 4774 45899999999999999988742 33
Q ss_pred --CeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-----CCceEEEEcCCCCccccCCChHHHHHH
Q 025730 171 --DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGRFSWTSSWIWG 243 (249)
Q Consensus 171 --d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~~~k~i~l~~PnNPTG~~~~~~e~i~~ 243 (249)
+.|++++++|..+...+...|.+++.++.++++.+|++++++++++ .++++|++++|+||||.+ .+.+.+.+
T Consensus 94 ~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~-~~~~~i~~ 172 (345)
T cd06450 94 DKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI-DPLEEIAD 172 (345)
T ss_pred CCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC-CCHHHHHH
Confidence 4788999999999888888899999999877778999999999973 168899999999999998 56777888
Q ss_pred HhhhhC
Q 025730 244 ISSEHN 249 (249)
Q Consensus 244 i~~~~~ 249 (249)
+|+++|
T Consensus 173 ~~~~~~ 178 (345)
T cd06450 173 LAEKYD 178 (345)
T ss_pred HHHHhC
Confidence 999875
No 182
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.45 E-value=1.7e-12 Score=118.41 Aligned_cols=115 Identities=12% Similarity=0.073 Sum_probs=96.0
Q ss_pred CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHH----HHHCCCEEEEecCCC
Q 025730 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS 201 (249)
Q Consensus 126 Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~----~~~~G~~v~~v~~~~ 201 (249)
+.++....|++.+|++.| .+++++++|+++++..++.+++++||+|++++|.|..+... ....|+++..++..
T Consensus 47 ~gnPt~~~lE~~lA~l~g--~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~- 123 (377)
T TIGR01324 47 RGTLTHFALQDAMCELEG--GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL- 123 (377)
T ss_pred CCCccHHHHHHHHHHHhC--CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence 345567899999999999 45899999999999999999999999999999999865543 34578888877532
Q ss_pred CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 202 ~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.+.++++++ +++|+|++++|+||+|.+ .+.+.+.++|+++|
T Consensus 124 ----~~e~l~~~i~-~~tklV~lesp~Np~g~~-~dl~~I~~la~~~g 165 (377)
T TIGR01324 124 ----IGEDIATLIQ-PNTKVLFLEAPSSITFEI-QDIPAIAKAARNPG 165 (377)
T ss_pred ----CHHHHHHhcC-CCceEEEEECCCCCCCcH-HHHHHHHHHHHHcC
Confidence 2378988887 789999999999999999 57777888899875
No 183
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.45 E-value=2.3e-12 Score=115.20 Aligned_cols=145 Identities=17% Similarity=0.112 Sum_probs=106.5
Q ss_pred eeeccCCCCC-CCCCHHHHHHHHh-ccC-CCC---CC-----CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 025730 97 IVKIDANENP-YGPPPEVREALGQ-LKF-PYI---YP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 97 ~I~L~~~~~~-~~~p~~v~~al~~-~~~-~~~---Yp-----~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
+++|+.++-. ...++++.+++.+ +.. ... |+ .+...++++.++++++.+ + .++++++++++..++++
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~-~iv~~sg~~a~~~~~~~ 80 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE-A-ALVFSSGYAANDGVLST 80 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-C-EEEeccHHHHHHHHHHH
Confidence 3455554432 2235788888876 321 111 21 123578999999999964 3 45555567788888888
Q ss_pred hcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc----CCceEEEEcCCCCccccCCChHHHH
Q 025730 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 166 ~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~----~~~k~i~l~~PnNPTG~~~~~~e~i 241 (249)
++++||+|+++.|+|..+...++..|++++.++. +|++++++.+++ .+++++++++|+||||... +.+.+
T Consensus 81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i 154 (349)
T cd06454 81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA-PLPEL 154 (349)
T ss_pred hcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc-CHHHH
Confidence 8899999999999999888888889999988863 477888888764 3578888899999999884 56777
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|+++|
T Consensus 155 ~~~~~~~~ 162 (349)
T cd06454 155 VDLAKKYG 162 (349)
T ss_pred HHHHHHcC
Confidence 88899875
No 184
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.44 E-value=5.4e-12 Score=117.24 Aligned_cols=113 Identities=20% Similarity=0.270 Sum_probs=96.8
Q ss_pred ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---------cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC
Q 025730 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK 200 (249)
Q Consensus 130 g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~---------~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~ 200 (249)
...+|+++++++++. +++++++|+++++.+++.++ ++|||+|+++.++|..+...+...|++++.++.+
T Consensus 64 ~~~~fe~~lA~~~g~--~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd 141 (438)
T PRK15407 64 FNDAFEKKLAEFLGV--RYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE 141 (438)
T ss_pred hHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 368899999999996 47899999999999988865 4899999999999999999999999999999965
Q ss_pred -CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 201 -SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 201 -~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+++.+|++.++++++ .++|+|+++|+ +|.. .+.+.+..+|++||
T Consensus 142 ~~~~~id~~~le~~i~-~~tkaVi~~~~---~G~p-~dl~~I~~la~~~g 186 (438)
T PRK15407 142 LPTYNIDASLLEAAVS-PKTKAIMIAHT---LGNP-FDLAAVKAFCDKHN 186 (438)
T ss_pred CCcCCcCHHHHHHHcC-cCCeEEEEeCC---CCCh-hhHHHHHHHHHHCC
Confidence 568899999999997 68999998874 5555 35677788898875
No 185
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.44 E-value=3.4e-12 Score=119.91 Aligned_cols=148 Identities=22% Similarity=0.262 Sum_probs=112.4
Q ss_pred ccCCCCCCCCCHHHHHHHHhc---cCCCCC-CC---cCh----HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH--HH-H
Q 025730 100 IDANENPYGPPPEVREALGQL---KFPYIY-PD---PES----RRLRAALAKDSGLESDHILVGCGADELIDLI--MR-C 165 (249)
Q Consensus 100 L~~~~~~~~~p~~v~~al~~~---~~~~~Y-p~---~g~----~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~--~~-~ 165 (249)
++.|+..+..|+.+.+++.+. ...+.| |. .|. .++++.+++++|++...+..++|+++.+..+ ++ .
T Consensus 73 ~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~ 152 (481)
T PRK04366 73 YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAY 152 (481)
T ss_pred ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHH
Confidence 666777788889998888753 122456 22 243 3456666677788755666677777666543 32 3
Q ss_pred hcCCCC----eEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHH
Q 025730 166 VLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 166 ~~~pGd----~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i 241 (249)
+.++|| +|++++|+|+.|...++..|++++.++.+.++.+|+++++++++ .++++|++++|| |||.+-.+.+.+
T Consensus 153 ~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-~~t~~V~v~~Pn-~tG~~~~dl~eI 230 (481)
T PRK04366 153 HEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-EDTAALMLTNPN-TLGLFERNILEI 230 (481)
T ss_pred hhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-cCCeEEEEeCCC-CccccchHHHHH
Confidence 467776 99999999999999999999999999987778999999999997 689999999999 999652355778
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
..+|+++|
T Consensus 231 ~~~a~~~g 238 (481)
T PRK04366 231 AEIVHEAG 238 (481)
T ss_pred HHHHHHcC
Confidence 88888875
No 186
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.4e-12 Score=115.74 Aligned_cols=125 Identities=20% Similarity=0.344 Sum_probs=103.8
Q ss_pred CCCC-CcChHHHHHHHHHHc----C--CCCCCEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCChhHHHHHHHCCCEEE
Q 025730 124 YIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (249)
Q Consensus 124 ~~Yp-~~g~~~lr~~la~~~----~--~~~~~I~vt~Ga~~~l~~~~~~~~-~pGd~Vlv~~P~y~~~~~~~~~~G~~v~ 195 (249)
--|. +.|.+-+|+.+|++. | .++++|++|.|++.++..++..++ .+.+.|++|-|.|+.|...+..+|+..+
T Consensus 107 GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v 186 (475)
T KOG0258|consen 107 GAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQV 186 (475)
T ss_pred cccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCccc
Confidence 4575 468999999999997 3 467899999999999999999875 4679999999999999999988888766
Q ss_pred Eec--CCCCCCCCHHHHHHhhcc----CCceEEEEcCCCCccccCCChHH--HHHHHhhhh
Q 025730 196 KVP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGRFSWTSS--WIWGISSEH 248 (249)
Q Consensus 196 ~v~--~~~~~~id~e~l~~~i~~----~~~k~i~l~~PnNPTG~~~~~~e--~i~~i~~~~ 248 (249)
.+- ...+|.+|+++|++.+++ -+++++++.||.||||.+++.+. .+-.+|+++
T Consensus 187 ~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~ 247 (475)
T KOG0258|consen 187 PYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE 247 (475)
T ss_pred ceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc
Confidence 554 557799999999998754 36789999999999999998873 355566554
No 187
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.44 E-value=3e-12 Score=115.84 Aligned_cols=153 Identities=20% Similarity=0.189 Sum_probs=120.4
Q ss_pred CCCeeeccCCCCCCCCCHHHHHHHHhc-c----CC-CC-CCC---cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 94 PEDIVKIDANENPYGPPPEVREALGQL-K----FP-YI-YPD---PESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 94 ~~~~I~L~~~~~~~~~p~~v~~al~~~-~----~~-~~-Yp~---~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
+.+.+.|+.+... +.++.|.+++... . .+ .+ |.. ...++.|+.+|+++|.++++|++|+|+|+++++++
T Consensus 41 ~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl 119 (428)
T KOG1549|consen 41 GTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVL 119 (428)
T ss_pred CCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHH
Confidence 3456888776543 4678899998762 1 11 22 321 23678999999999999989999999999999999
Q ss_pred HHhc-CCCC----eEEEcCCCChhH---HHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCC
Q 025730 164 RCVL-DPGD----KIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFS 235 (249)
Q Consensus 164 ~~~~-~pGd----~Vlv~~P~y~~~---~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~ 235 (249)
+.+. ..+| .|++..-.|... ....+..|.+++++|.++++.+|.+.++++++ ++|++|.|.+.||-+|+++
T Consensus 120 ~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-~~T~lv~I~~Vnn~~gv~~ 198 (428)
T KOG1549|consen 120 KGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-SKTRLVSIMHVNNEIGVLQ 198 (428)
T ss_pred HHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-CCceEEEEEecccCccccc
Confidence 9873 3566 899888888743 33445589999999988888899999999999 8999999999999999995
Q ss_pred ChHHHHHHHhhhhC
Q 025730 236 WTSSWIWGISSEHN 249 (249)
Q Consensus 236 ~~~e~i~~i~~~~~ 249 (249)
+.++|..+|+++|
T Consensus 199 -Pv~EI~~icr~~~ 211 (428)
T KOG1549|consen 199 -PVKEIVKICREEG 211 (428)
T ss_pred -cHHHHHHHhCcCC
Confidence 6666677888764
No 188
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=2.8e-12 Score=113.94 Aligned_cols=170 Identities=17% Similarity=0.198 Sum_probs=122.9
Q ss_pred CCCcHHHHHHHhCCC-CCCeeeccCCC--CCCC---CCHHHHHHHHhc---cCCCCC-CCcChHHHHHHHHHHc-C----
Q 025730 79 PILPFEVLSIQLGRK-PEDIVKIDANE--NPYG---PPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G---- 143 (249)
Q Consensus 79 ~~~~~~~~~~~~g~~-~~~~I~L~~~~--~~~~---~p~~v~~al~~~---~~~~~Y-p~~g~~~lr~~la~~~-~---- 143 (249)
+..++-.+...+... .++.|+|++|. +..+ .-+.|.+|-+.+ .....| |-.|.+++++.+++.+ |
T Consensus 9 p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~ 88 (396)
T COG1448 9 PADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSP 88 (396)
T ss_pred CCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcH
Confidence 445566666666543 35679999983 2222 234555555442 234677 8889999999999985 5
Q ss_pred -CCCCCE--EEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCChhHHHHHHHCCCEEEEec--CCCCCCCCHHHHHHhhcc
Q 025730 144 -LESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER 216 (249)
Q Consensus 144 -~~~~~I--~vt~Ga~~~l~~~~~~~--~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~--~~~~~~id~e~l~~~i~~ 216 (249)
+..+.| +-|.|+|.+|.+....+ ..|..+|++++|+|+.+..+++..|.++..+| ..++..+|++.+.+.+++
T Consensus 89 ~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~ 168 (396)
T COG1448 89 ALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKT 168 (396)
T ss_pred HHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHh
Confidence 334443 46899999999998765 45667899999999999999999999999999 234566999999999876
Q ss_pred CCceEEEEcC--CCCccccCCChHHH--HHHHhhhh
Q 025730 217 EKPKCIFLTS--PNNPDGRFSWTSSW--IWGISSEH 248 (249)
Q Consensus 217 ~~~k~i~l~~--PnNPTG~~~~~~e~--i~~i~~~~ 248 (249)
-..+-|+|-| .|||||..++.++| +..+.+++
T Consensus 169 a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r 204 (396)
T COG1448 169 APEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER 204 (396)
T ss_pred CCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc
Confidence 4444444444 39999999999988 44455443
No 189
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.43 E-value=2.5e-12 Score=119.21 Aligned_cols=115 Identities=14% Similarity=0.145 Sum_probs=97.6
Q ss_pred CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHH----HHHCCCEEEEecCCC
Q 025730 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS 201 (249)
Q Consensus 126 Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~----~~~~G~~v~~v~~~~ 201 (249)
+..+...+|++.+|+++|.. ..+++++++++|.+++.+++++||+|+++...|...... +...|++++.++.+
T Consensus 61 ~~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 137 (433)
T PRK08134 61 ISNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG- 137 (433)
T ss_pred CcChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-
Confidence 34456789999999999954 478899999999999999999999999999999744333 34489999999863
Q ss_pred CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 202 ~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
|+++++++++ +++|+|++.+|+||+|.+ .+.+.+.++|+++|
T Consensus 138 ----d~~~l~~~i~-~~TklV~~e~~~np~g~v-~Di~~I~~la~~~g 179 (433)
T PRK08134 138 ----DIDGWRAAIR-PNTRLLFGETLGNPGLEV-LDIPTVAAIAHEAG 179 (433)
T ss_pred ----CHHHHHHhcC-CCCeEEEEECCCcccCcc-cCHHHHHHHHHHcC
Confidence 7999999998 789999999999999999 57788888999875
No 190
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.43 E-value=3.9e-12 Score=113.91 Aligned_cols=116 Identities=22% Similarity=0.304 Sum_probs=100.0
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC-CCC
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS 204 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~-~~~ 204 (249)
..+...++++.+++++|. +++++++|+++++..++.++ +++||+|+++.++|..+...+...|++++.++.+. ++.
T Consensus 16 ~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 93 (352)
T cd00616 16 LGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYN 93 (352)
T ss_pred CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCC
Confidence 445688999999999994 56888889999999999988 68999999999999988888888999999999765 788
Q ss_pred CCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 205 LNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 205 id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+|+++++++++ .++++|+++| ++|.. .+.+.+..+|+++|
T Consensus 94 ~d~~~l~~~i~-~~~~~v~~~~---~~G~~-~~~~~i~~l~~~~~ 133 (352)
T cd00616 94 IDPELIEAAIT-PRTKAIIPVH---LYGNP-ADMDAIMAIAKRHG 133 (352)
T ss_pred cCHHHHHHhcC-cCCeEEEEEC---CCCCc-CCHHHHHHHHHHcC
Confidence 99999999997 6899999764 68988 45677778898875
No 191
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.43 E-value=3e-12 Score=118.56 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=96.6
Q ss_pred CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecCCC
Q 025730 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKS 201 (249)
Q Consensus 126 Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~~~ 201 (249)
++++...+|++.++++.|.+ ..+++++++.++.+++.+++++||+|+++.++|.. +...+...|++++.++..
T Consensus 60 ~~~p~~~~le~~lA~l~g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 136 (427)
T PRK05994 60 ITNPTNAVLEERVAALEGGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD- 136 (427)
T ss_pred CCCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC-
Confidence 34556788999999999854 47788888999999999999999999999999974 334466789999998752
Q ss_pred CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 202 ~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
|+++++++++ +++|+|++++|+||||.++ +.+.+..+|+++|
T Consensus 137 ----d~~~l~~ai~-~~tklV~vesp~NptG~v~-dl~~I~~la~~~g 178 (427)
T PRK05994 137 ----DPASFERAIT-PRTKAIFIESIANPGGTVT-DIAAIAEVAHRAG 178 (427)
T ss_pred ----CHHHHHHhcC-cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcC
Confidence 7899999997 6899999999999999996 5667778898875
No 192
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.43 E-value=2.3e-12 Score=119.25 Aligned_cols=116 Identities=18% Similarity=0.240 Sum_probs=93.7
Q ss_pred CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh-HHHHHHH---CCCEEEEecCC
Q 025730 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDAAV---NGAAVVKVPRK 200 (249)
Q Consensus 125 ~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~-~~~~~~~---~G~~v~~v~~~ 200 (249)
+++++...+|++.||++.|. +..++++++++++.+++.+++++||+|+++.+.|.. +...... .|+++..++.
T Consensus 54 r~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~- 130 (425)
T PRK06084 54 RIMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH- 130 (425)
T ss_pred CCCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-
Confidence 44667788999999999984 456677888899999999999999999999999983 4333322 5677766653
Q ss_pred CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 201 ~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++++|++++|+||||.++ +.+.+.++|+++|
T Consensus 131 ----~d~e~le~ai~-~~tklV~lesp~NPtG~v~-dl~~I~~la~~~~ 173 (425)
T PRK06084 131 ----DDIAALEALID-ERTKAVFCESIGNPAGNII-DIQALADAAHRHG 173 (425)
T ss_pred ----CCHHHHHHHhc-cCCcEEEEeCCCCCCCeec-CHHHHHHHHHHcC
Confidence 38999999998 6899999999999999996 4677778898875
No 193
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.42 E-value=3e-12 Score=116.92 Aligned_cols=116 Identities=16% Similarity=0.223 Sum_probs=92.1
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhH----HHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~----~~~~~~~G~~v~~v~~ 199 (249)
.+|+++....|+++++++.|.+ ..+++++| +.++.+++ .+++|||+|++++|.|... ...+...|+++..++.
T Consensus 45 ~r~~~p~~~~Le~~la~l~g~~-~al~~~SG-~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 45 SRSGNPTRFALEELIADLEGGV-KGFAFASG-LAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred cCCCChhHHHHHHHHHHHhCCC-CEEEECCH-HHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 4566677889999999999853 34555555 56888766 4789999999999999633 3445568999888864
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++++|++++|+||||.+. +.+.+..+|+++|
T Consensus 122 -----~d~e~l~~ai~-~~t~lV~lesP~Nptg~~~-di~~I~~la~~~g 164 (380)
T PRK06176 122 -----SDLSQIKKAIK-PNTKALYLETPSNPLLKIT-DLAQCASVAKDHG 164 (380)
T ss_pred -----CCHHHHHHhcC-cCceEEEEECCCCCCceec-CHHHHHHHHHHcC
Confidence 37999999997 6899999999999999995 5667788898875
No 194
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.42 E-value=4.2e-12 Score=115.44 Aligned_cols=117 Identities=21% Similarity=0.225 Sum_probs=97.7
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHH----HHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~----~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+++++|. +..++++++++++..++.+++++||+|+++.+.|..... .+...|+++..++.
T Consensus 35 ~r~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 35 SRIGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred ECCCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC
Confidence 345667789999999999984 467777888999999999999999999999999975433 34568999998875
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+ |+++++++++ .++++|++.+|+||+|.+. +.+.+.++|+++|
T Consensus 113 ~-----d~~~l~~~i~-~~~~~v~~e~~~np~g~~~-dl~~i~~la~~~g 155 (369)
T cd00614 113 D-----DPEALEAAIK-PETKLVYVESPTNPTLKVV-DIEAIAELAHEHG 155 (369)
T ss_pred C-----CHHHHHHhcC-CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcC
Confidence 3 5899999997 5899999999999999995 5677788898875
No 195
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.41 E-value=5.5e-12 Score=113.48 Aligned_cols=150 Identities=20% Similarity=0.228 Sum_probs=118.9
Q ss_pred eeeccCCCCCCCCCHHHHHHHHh-ccCC-------CCCCC---cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 025730 97 IVKIDANENPYGPPPEVREALGQ-LKFP-------YIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 97 ~I~L~~~~~~~~~p~~v~~al~~-~~~~-------~~Yp~---~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
+|.|+.+... ++.+++++++.. +... +.|.. .-.++.|+.+|+.+|+++++|++|+|+||+.++++..
T Consensus 2 miYlD~~ATT-p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g 80 (386)
T COG1104 2 MIYLDNAATT-PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKG 80 (386)
T ss_pred cccccccccC-CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHh
Confidence 3566665543 345788888765 2211 22221 1246789999999999999999999999999999987
Q ss_pred h--cC----CCCeEEEcCCCChhHHHHHHH---CCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 166 V--LD----PGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 166 ~--~~----pGd~Vlv~~P~y~~~~~~~~~---~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
. .. .|.+|+++.-.|......++. .|.+|.++|.+.++.+|+++|+++++ ++|.+|.|.+.||-||++ .
T Consensus 81 ~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-~~T~LVSim~aNnE~G~I-Q 158 (386)
T COG1104 81 AALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-PDTILVSIMHANNETGTI-Q 158 (386)
T ss_pred hHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-CCceEEEEEecccCeeec-c
Confidence 3 22 478999999999866665555 49999999999999999999999999 789999999999999999 6
Q ss_pred hHHHHHHHhhhhC
Q 025730 237 TSSWIWGISSEHN 249 (249)
Q Consensus 237 ~~e~i~~i~~~~~ 249 (249)
+.+.+..+|++++
T Consensus 159 pI~ei~~i~k~~~ 171 (386)
T COG1104 159 PIAEIGEICKERG 171 (386)
T ss_pred cHHHHHHHHHHcC
Confidence 8888899999875
No 196
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.41 E-value=2.1e-12 Score=118.91 Aligned_cols=151 Identities=19% Similarity=0.135 Sum_probs=108.6
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHHh-cc--CC-----CCCCCc--ChHH----HHHHHHHHcCCCCCCEEEeCCHHHH
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FP-----YIYPDP--ESRR----LRAALAKDSGLESDHILVGCGADEL 158 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~~-~~--~~-----~~Yp~~--g~~~----lr~~la~~~~~~~~~I~vt~Ga~~~ 158 (249)
..++.|+|..++++ +++.+++++.. +. +. .+|... .... .++.+++++|.+..+|++++| +++
T Consensus 23 ~~~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sg-t~a 99 (416)
T PRK00011 23 RQEEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSG-SQA 99 (416)
T ss_pred HHhcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCc-hHH
Confidence 34567999999998 57889988865 21 11 112111 1222 344788999988777777666 678
Q ss_pred HHHHHHHhcCCCCeEEEcCCCChhHHH-----HHHHCCCEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccc
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~~~~~-----~~~~~G~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG 232 (249)
+..++.++++|||+|+++.|+|..+.. .....|++++.++.+ +++.+|++++++++++.++++|++++++|+
T Consensus 100 l~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~~-- 177 (416)
T PRK00011 100 NAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAYS-- 177 (416)
T ss_pred HHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcCC--
Confidence 999999999999999999999975421 122356788888865 458899999999997457999999876654
Q ss_pred cCCChHHHHHHHhhhhC
Q 025730 233 RFSWTSSWIWGISSEHN 249 (249)
Q Consensus 233 ~~~~~~e~i~~i~~~~~ 249 (249)
.. .+.+.+.++|+++|
T Consensus 178 ~~-~~~~~I~~la~~~~ 193 (416)
T PRK00011 178 RP-IDFKRFREIADEVG 193 (416)
T ss_pred Cc-cCHHHHHHHHHHcC
Confidence 44 35677888898875
No 197
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.39 E-value=1.2e-11 Score=112.40 Aligned_cols=149 Identities=13% Similarity=0.140 Sum_probs=109.4
Q ss_pred CCCCeeeccCCC-CCCCCCHHHHHHHHh-cc-CC---CCCC-CcChHHHHHHHH----HHcCCCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-FP---YIYP-DPESRRLRAALA----KDSGLESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~-~~~~~p~~v~~al~~-~~-~~---~~Yp-~~g~~~lr~~la----~~~~~~~~~I~vt~Ga~~~l~~ 161 (249)
.+.++|+|+.++ ..+++++.+.+++.+ +. .. ..|. ..|..+++++++ ++++. +++|++++|+ +++..
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~-~a~~~ 108 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGF-NTNQG 108 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHH
Confidence 356789999886 567788888887765 32 21 2342 235445555554 44564 4568888885 56667
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---CCceEEEEcCCCCccccCCChH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
++..++++||.|++..|+|..+...+...|.+++.++ .+|++++++.+++ .++++|++++++||||.+. +.
T Consensus 109 a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~-~~ 182 (385)
T TIGR01825 109 VLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA-PL 182 (385)
T ss_pred HHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc-CH
Confidence 8888899999999999999988877788888887764 4788888887753 3688888888999999985 45
Q ss_pred HHHHHHhhhhC
Q 025730 239 SWIWGISSEHN 249 (249)
Q Consensus 239 e~i~~i~~~~~ 249 (249)
+.+.++|++||
T Consensus 183 ~~i~~l~~~~~ 193 (385)
T TIGR01825 183 PEIVELAERYG 193 (385)
T ss_pred HHHHHHHHHhC
Confidence 66888898875
No 198
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.39 E-value=4.7e-12 Score=113.76 Aligned_cols=124 Identities=15% Similarity=0.250 Sum_probs=104.3
Q ss_pred CCC-CCcChHHHHHHHHHHcC-------CCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEE
Q 025730 124 YIY-PDPESRRLRAALAKDSG-------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (249)
Q Consensus 124 ~~Y-p~~g~~~lr~~la~~~~-------~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~ 195 (249)
.+| +..|.++|...+.++.+ ...-+|++|+|.+.+++.+++.+++.||.|++..++|+.-....+..|++++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i 173 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII 173 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence 578 56789999999999765 1223799999999999999999999999999999999988888888999999
Q ss_pred EecCCCCCCCCHHHHHHhhccC--------CceEEEEcCC--CCccccCCChH--HHHHHHhhhhC
Q 025730 196 KVPRKSDFSLNVELIADAVERE--------KPKCIFLTSP--NNPDGRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 196 ~v~~~~~~~id~e~l~~~i~~~--------~~k~i~l~~P--nNPTG~~~~~~--e~i~~i~~~~~ 249 (249)
.|+++ ..++++|.|++.+++. +++++| |-| +||||..++.+ +.+-.||++||
T Consensus 174 pv~md-~~Gi~pE~l~~il~~w~~~~~k~~~p~vlY-TIPTgqNPTG~tls~errk~iy~LArKyD 237 (472)
T KOG0634|consen 174 PVKMD-QDGIDPESLEEILSNWKPGSYKKPKPHVLY-TIPTGQNPTGNTLSLERRKKIYQLARKYD 237 (472)
T ss_pred ecccc-CCCCCHHHHHHHHhcCCcccccCCCCeEEE-eCcCCCCCCCCccCHHHHHHHHHHHHHcC
Confidence 99984 4589999999998653 245555 545 79999999998 44788999986
No 199
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.38 E-value=5.7e-12 Score=115.27 Aligned_cols=148 Identities=19% Similarity=0.184 Sum_probs=107.5
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHh-cc--CC------CCC-CCcChHHHHH----HHHHHcCCCCCCEEEeCCHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQ-LK--FP------YIY-PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDL 161 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~-~~--~~------~~Y-p~~g~~~lr~----~la~~~~~~~~~I~vt~Ga~~~l~~ 161 (249)
..+.|..+++.. ++.+++++.. +. +. ..| +..+..++++ .+++++|.+..+|++++ +++++..
T Consensus 20 ~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~s-gt~a~~~ 96 (402)
T cd00378 20 ETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHS-GSQANLA 96 (402)
T ss_pred hCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCC-cHHHHHH
Confidence 357887777775 6789999875 21 11 123 2233445555 46678898766666665 5789999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHH-----HHHCCCEEEEecCCC---CCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~-----~~~~G~~v~~v~~~~---~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
++.++++|||+|++++|+|..+... ++..|.++..++.+. ++.+|++++++++.+.++++|++++|+||+
T Consensus 97 ~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~~-- 174 (402)
T cd00378 97 VYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYPR-- 174 (402)
T ss_pred HHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccCC--
Confidence 9999999999999999999755332 556788777776432 689999999999965689999999998874
Q ss_pred CCChHHHHHHHhhhhC
Q 025730 234 FSWTSSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~i~~i~~~~~ 249 (249)
. .+.+.+.++|+++|
T Consensus 175 ~-~~~~~I~~l~~~~~ 189 (402)
T cd00378 175 P-IDFKRFREIADEVG 189 (402)
T ss_pred C-cCHHHHHHHHHhcC
Confidence 3 34566788898875
No 200
>PLN02509 cystathionine beta-lyase
Probab=99.37 E-value=7e-12 Score=116.97 Aligned_cols=116 Identities=21% Similarity=0.298 Sum_probs=93.1
Q ss_pred CCCC---CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHH----HHHCCCEEEE
Q 025730 124 YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVK 196 (249)
Q Consensus 124 ~~Yp---~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~----~~~~G~~v~~ 196 (249)
+.|. ++....|.+.++++.+ .++.++++|++.++.+++ .++++||+|+++.|.|..+... ....|++++.
T Consensus 125 ~~Y~r~gnpt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~ 201 (464)
T PLN02509 125 YDYTRSGNPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKR 201 (464)
T ss_pred CccCCCCCHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEE
Confidence 4564 2346678888888877 556777788899987666 5789999999999999877533 4468999998
Q ss_pred ecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 197 VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 197 v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++. .|+++++++++ +++|+|++++|+||||.+ .+.+.+.++|++||
T Consensus 202 vd~-----~d~e~l~~ai~-~~TklV~lesPsNPtG~i-~Dl~~I~~lAk~~g 247 (464)
T PLN02509 202 VNT-----TNLDEVAAAIG-PQTKLVWLESPTNPRQQI-SDIRKIAEMAHAQG 247 (464)
T ss_pred eCC-----CCHHHHHHhCC-cCCeEEEEECCCCCCCCH-HHHHHHHHHHHHcC
Confidence 864 36899999997 789999999999999998 67788888899875
No 201
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.37 E-value=1.2e-11 Score=113.32 Aligned_cols=112 Identities=14% Similarity=0.096 Sum_probs=90.8
Q ss_pred cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHH----HHHHCCCEEEEecCCCCCC
Q 025730 129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFS 204 (249)
Q Consensus 129 ~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~----~~~~~G~~v~~v~~~~~~~ 204 (249)
+....|++.++...+- .+. ++++++++++..++.+++++||+|++++|.|..+.. .++..|+++..++.+
T Consensus 64 Pt~~~Le~~la~le~~-~~~-v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~---- 137 (395)
T PRK05967 64 PTTDALCKAIDALEGS-AGT-ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE---- 137 (395)
T ss_pred hHHHHHHHHHHHHhCC-CCE-EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC----
Confidence 4455788888877652 334 455557899999999999999999999999987664 446689999998642
Q ss_pred CCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 205 LNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 205 id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.+.++++++ +++|+|++++|+||+|.+ .+.+.+.++|+++|
T Consensus 138 -~~e~l~~al~-~~TklV~lesPsNP~l~v-~dl~~I~~la~~~g 179 (395)
T PRK05967 138 -IGAGIAKLMR-PNTKVVHTEAPGSNTFEM-QDIPAIAEAAHRHG 179 (395)
T ss_pred -CHHHHHHhcC-cCceEEEEECCCCCCCcH-HHHHHHHHHHHHhC
Confidence 3578999997 689999999999999988 57788889999875
No 202
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.36 E-value=1.5e-11 Score=111.12 Aligned_cols=114 Identities=22% Similarity=0.318 Sum_probs=100.8
Q ss_pred cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCCCCC
Q 025730 129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN 206 (249)
Q Consensus 129 ~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~~id 206 (249)
+...+|.+++++|+| ..+.+.++++|.+|.++++++ ++|||+|+++.-+|......+...|+++++|+.+ +.+.+|
T Consensus 34 ~~v~~FE~~~ae~~G--~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid 111 (374)
T COG0399 34 PFVRRFEQAFAEYLG--VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNID 111 (374)
T ss_pred hHHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCC
Confidence 347899999999999 557888899999999999955 6999999999999999999999999999999976 559999
Q ss_pred HHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 207 VELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 207 ~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++.++++|+ +++|+|+ |-+--|.. .+.+.+..||++||
T Consensus 112 ~~~ie~aIt-~~tKAIi---pVhl~G~~-~dm~~i~~la~~~~ 149 (374)
T COG0399 112 PDLIEAAIT-PRTKAII---PVHLAGQP-CDMDAIMALAKRHG 149 (374)
T ss_pred HHHHHHHcc-cCCeEEE---EehhccCC-CCHHHHHHHHHHcC
Confidence 999999999 6799999 55566777 68889999999986
No 203
>PRK07179 hypothetical protein; Provisional
Probab=99.35 E-value=5.1e-11 Score=109.46 Aligned_cols=149 Identities=16% Similarity=0.150 Sum_probs=113.9
Q ss_pred CCCCeeeccCCC-CCCCCCHHHHHHHHh-cc-C------CCCCC--CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-F------PYIYP--DPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~-~~~~~p~~v~~al~~-~~-~------~~~Yp--~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~ 161 (249)
++..+++++.++ -.+...|.+++++.+ +. . ...|. .....+|++.+++++|. +.+++++|+++++..
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~sG~~An~~ 129 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--ESCLLCQSGWAANVG 129 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence 345678887764 344556778877754 31 1 12232 12367899999999996 457889999999999
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHH
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i 241 (249)
++++++.+||.|++..+.|......+...|++++.++. .|++++++++++.++++|++++|+||||.+.+ .+.+
T Consensus 130 ~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~p-l~~I 203 (407)
T PRK07179 130 LLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAP-LADI 203 (407)
T ss_pred HHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCcccc-HHHH
Confidence 99999999999999999998777777778888776643 48999999997445789999999999999965 5677
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|+++|
T Consensus 204 ~~l~~~~~ 211 (407)
T PRK07179 204 VDIAEEFG 211 (407)
T ss_pred HHHHHHcC
Confidence 88898875
No 204
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.35 E-value=2.6e-11 Score=111.50 Aligned_cols=146 Identities=18% Similarity=0.155 Sum_probs=103.3
Q ss_pred CeeeccCC-CCCCCCCHHHHHHHHh-cc-CC-------CCCCCc-ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 96 DIVKIDAN-ENPYGPPPEVREALGQ-LK-FP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 96 ~~I~L~~~-~~~~~~p~~v~~al~~-~~-~~-------~~Yp~~-g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
+.+.++.| .+++++++.+++++.+ +. .+ ..|+.. ...+|++.+++++|. ++.|++++|+ ++...++.
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-~~~i~~~sG~-~a~~~~i~ 124 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-ESALLFTSGY-VSNDAALS 124 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-CCEEEECcHH-HHHHHHHH
Confidence 34555554 6788889999988865 32 11 123332 467899999999995 5678888875 56666666
Q ss_pred Hhc--CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhc---cCCceEEEEcCCCCccccCCChHH
Q 025730 165 CVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 165 ~~~--~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~---~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
.+. .+||.|++....|..+...+...|+++..++.+ |.+.+++.++ ..++++|++++|+||||.+++ .+
T Consensus 125 ~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~-l~ 198 (410)
T PRK13392 125 TLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP-IE 198 (410)
T ss_pred HHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc-HH
Confidence 554 489988887777877666777889988777532 3444444442 257899999999999999964 66
Q ss_pred HHHHHhhhhC
Q 025730 240 WIWGISSEHN 249 (249)
Q Consensus 240 ~i~~i~~~~~ 249 (249)
.+..+|++||
T Consensus 199 ~i~~l~~~~~ 208 (410)
T PRK13392 199 AICDLADRYN 208 (410)
T ss_pred HHHHHHHHcC
Confidence 6777888875
No 205
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.34 E-value=9.5e-12 Score=112.80 Aligned_cols=148 Identities=21% Similarity=0.272 Sum_probs=116.4
Q ss_pred eccCCCCCCCCCHHHHHHHHhc-c----CC--CCCC-C----cChHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHH
Q 025730 99 KIDANENPYGPPPEVREALGQL-K----FP--YIYP-D----PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRC 165 (249)
Q Consensus 99 ~L~~~~~~~~~p~~v~~al~~~-~----~~--~~Yp-~----~g~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~~~~~~ 165 (249)
.|+.+... +.|+.+++++.+. . .+ ..+. . .-..++|+.+++++|.++ ++|+++.|++++++.++.+
T Consensus 2 Yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 2 YLDNAGTG-PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEBTSSS--B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred EeeCCCcc-CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 45544443 4678888888752 1 11 0111 1 124689999999999988 8999999999999999999
Q ss_pred h---cCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 166 V---LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 166 ~---~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
+ +++||+|++.+-.|.. +....+..|+++..++.+.+..+|+++++++++ +++++|++++.+|-||..+ +.
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-~~~~lv~~~~~~~~tG~~~-pi 158 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-PDTRLVSISHVENSTGVRN-PI 158 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-TTESEEEEESBETTTTBBS-SH
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-cccceEEeecccccccEEe-ee
Confidence 9 7999999999999863 445556789999999977778899999999998 8999999999999999984 67
Q ss_pred HHHHHHhhhhC
Q 025730 239 SWIWGISSEHN 249 (249)
Q Consensus 239 e~i~~i~~~~~ 249 (249)
+.+..+|+++|
T Consensus 159 ~~I~~~~~~~~ 169 (371)
T PF00266_consen 159 EEIAKLAHEYG 169 (371)
T ss_dssp HHHHHHHHHTT
T ss_pred ceehhhhhccC
Confidence 77788888875
No 206
>PRK05968 hypothetical protein; Provisional
Probab=99.32 E-value=3.3e-11 Score=110.38 Aligned_cols=116 Identities=22% Similarity=0.224 Sum_probs=94.2
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChh----HHHHHHHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~----~~~~~~~~G~~v~~v~~ 199 (249)
.+|+++...+|++.+++++|.+ ..+++++++.++.+++.+++++||+|+++.+.|.. +...+...|++++.++.
T Consensus 58 ~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 58 SRGDNPTVRAFEEMLAKLEGAE--DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred cCCCChhHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 3455666889999999999964 33445566789999998899999999999999974 34456668999999874
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
. |++++++++ .++|+|+++||+||++.+ .+.+.+.++|++||
T Consensus 136 ~-----d~~~l~~~i--~~tklV~ie~pt~~~~~~-~dl~~i~~la~~~g 177 (389)
T PRK05968 136 R-----DEEAVAKAL--PGAKLLYLESPTSWVFEL-QDVAALAALAKRHG 177 (389)
T ss_pred C-----CHHHHHHhc--ccCCEEEEECCCCCCCcH-HHHHHHHHHHHHcC
Confidence 2 789999988 368999999999999988 67788888999875
No 207
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.32 E-value=2.7e-11 Score=109.79 Aligned_cols=153 Identities=17% Similarity=0.256 Sum_probs=109.3
Q ss_pred CCCeeeccCC--CCCCCCC-HHHHHHHHh-ccC----CCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 025730 94 PEDIVKIDAN--ENPYGPP-PEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 94 ~~~~I~L~~~--~~~~~~p-~~v~~al~~-~~~----~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
+...|||..+ .++++.. +.+.+++.+ +.. ...|+.+...+|.+.++++++. +++++++|+++++.++++.
T Consensus 26 g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~~~~sg~~a~~~a~~~ 103 (379)
T TIGR00707 26 GKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGA--DRVFFCNSGAEANEAALKL 103 (379)
T ss_pred CCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHHH
Confidence 4567899886 4566655 788877765 322 2456666678899999999986 4999999999999999885
Q ss_pred h---cC----CCCeEEEcCCCChhHHHHHHHCCCEEEE----ecCCCCCCC----CHHHHHHhhccCCceEEEEcCCCCc
Q 025730 166 V---LD----PGDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDFSL----NVELIADAVEREKPKCIFLTSPNNP 230 (249)
Q Consensus 166 ~---~~----pGd~Vlv~~P~y~~~~~~~~~~G~~v~~----v~~~~~~~i----d~e~l~~~i~~~~~k~i~l~~PnNP 230 (249)
+ .. +||+|++++|+|..|...+...+..... .+...++.. |++.+++.++ .++++|+++.++||
T Consensus 104 ~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~p~~~~ 182 (379)
T TIGR00707 104 ARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID-DETAAVIVEPIQGE 182 (379)
T ss_pred HHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh-hCeeEEEEEccccC
Confidence 4 22 3799999999998877776665554322 222222222 8999999997 57899999666677
Q ss_pred cccC-CChH--HHHHHHhhhhC
Q 025730 231 DGRF-SWTS--SWIWGISSEHN 249 (249)
Q Consensus 231 TG~~-~~~~--e~i~~i~~~~~ 249 (249)
+|.. ++.+ +.+..+|+++|
T Consensus 183 ~g~~~~~~~~l~~i~~l~~~~~ 204 (379)
T TIGR00707 183 GGVNPASAEFLKALREICKDKD 204 (379)
T ss_pred CCCccCCHHHHHHHHHHHHHcC
Confidence 7764 3333 44677888875
No 208
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.31 E-value=6.3e-11 Score=109.97 Aligned_cols=114 Identities=17% Similarity=0.158 Sum_probs=93.7
Q ss_pred CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHH----HHHHCCCEEEEecCCCCC
Q 025730 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF 203 (249)
Q Consensus 128 ~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~----~~~~~G~~v~~v~~~~~~ 203 (249)
++....|++.+++++|.+ ..+++++++.++..++.+++++||+|++....|..... .+...|++++.++ +.
T Consensus 68 ~p~~~~Le~~lA~l~g~~--~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~-- 142 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV--AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP-- 142 (436)
T ss_pred CchHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC--
Confidence 456789999999999953 46777788889999999999999999999988875332 2344788888885 11
Q ss_pred CCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 204 SLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 204 ~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|++.++++++ +++++|++.+|+||+|.+ .+.+.+.++|+++|
T Consensus 143 -~d~e~l~~ai~-~~tklV~ie~~sNp~G~v-~Dl~~I~~la~~~g 185 (436)
T PRK07812 143 -DDLDAWRAAVR-PNTKAFFAETISNPQIDV-LDIPGVAEVAHEAG 185 (436)
T ss_pred -CCHHHHHHhCC-CCCeEEEEECCCCCCCee-cCHHHHHHHHHHcC
Confidence 38999999998 789999999999999999 57778888999875
No 209
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.29 E-value=3.2e-11 Score=109.37 Aligned_cols=114 Identities=21% Similarity=0.260 Sum_probs=94.6
Q ss_pred cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCCCCC
Q 025730 129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN 206 (249)
Q Consensus 129 ~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~~id 206 (249)
+...+|++++++++| ..+++.+++++.+|.+++.++ +++||+|+++..+|......+...|++++.++.+ +++.+|
T Consensus 25 ~~~~~fE~~~a~~~g--~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id 102 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFG--VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNID 102 (363)
T ss_dssp HHHHHHHHHHHHHHT--SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-
T ss_pred HHHHHHHHHHHHHhC--CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcC
Confidence 347899999999999 568999999999999999987 5799999999999999999999999999999976 789999
Q ss_pred HHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 207 VELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 207 ~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++.++++++ +++|+|+++| .-|.. .+.+.+..+|++||
T Consensus 103 ~~~~~~~i~-~~t~ai~~~h---~~G~~-~d~~~i~~~~~~~~ 140 (363)
T PF01041_consen 103 PEALEKAIT-PKTKAILVVH---LFGNP-ADMDAIRAIARKHG 140 (363)
T ss_dssp HHHHHHHHH-TTEEEEEEE----GGGB----HHHHHHHHHHTT
T ss_pred HHHHHHHhc-cCccEEEEec---CCCCc-ccHHHHHHHHHHcC
Confidence 999999998 7899999554 55666 47788899999876
No 210
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.23 E-value=2.5e-10 Score=103.27 Aligned_cols=143 Identities=20% Similarity=0.216 Sum_probs=118.7
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCc--ChHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh-
Q 025730 106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT- 181 (249)
Q Consensus 106 ~~~~p~~v~~al~~~~~~~~Yp~~--g~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~- 181 (249)
|...++.|++++..-..+++-|+. -..++.+.+...++.+. +-++++.+++.+++..+..++.|||+|++...+..
T Consensus 13 P~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG 92 (383)
T COG0075 13 PVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFG 92 (383)
T ss_pred CCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHH
Confidence 556788999999873333444542 25678888888888764 45667788899999999999999999999888764
Q ss_pred -hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhc-cCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 182 -MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 182 -~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~-~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.+..+++.+|+++..+..+++-.+|+++++++++ +++.++|.++|.-.+||+. ++.+.+..++++||
T Consensus 93 ~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl-npl~~I~~~~k~~g 161 (383)
T COG0075 93 ERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL-NPLKEIAKAAKEHG 161 (383)
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCccccc-CcHHHHHHHHHHcC
Confidence 6888999999999999988888899999999998 3568899999999999999 68899999999885
No 211
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.23 E-value=1.2e-10 Score=106.97 Aligned_cols=152 Identities=20% Similarity=0.220 Sum_probs=108.8
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-cc---CC---CCCC--C--cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LK---FP---YIYP--D--PESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~---~~---~~Yp--~--~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
++.+.|+.+... +.|+.+.+++.. +. .. ..|. . ....+.++.+ +++|.++++|++|+|+++++++++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~l~~~~ 103 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTINLHLLL 103 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHHHHHHH
Confidence 456899966644 347777777753 11 10 1111 1 1122333445 788999999999999999999999
Q ss_pred HHhcCCCC---eEEEcCCCChh--H--HHHHHHCCCEE----EEecCCCCCCCCHHHHHHhhc--cCCceEEEEcCCCCc
Q 025730 164 RCVLDPGD---KIVDCPPTFTM--Y--EFDAAVNGAAV----VKVPRKSDFSLNVELIADAVE--REKPKCIFLTSPNNP 230 (249)
Q Consensus 164 ~~~~~pGd---~Vlv~~P~y~~--~--~~~~~~~G~~v----~~v~~~~~~~id~e~l~~~i~--~~~~k~i~l~~PnNP 230 (249)
.+++++|+ .|++....|+. + ...++..|+++ +.++.+.++.+|++++++.++ .+++++|++++++|.
T Consensus 104 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~ 183 (406)
T TIGR01814 104 ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYY 183 (406)
T ss_pred HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccc
Confidence 98877653 68888889974 3 23455678887 566665667789999988874 267999999999999
Q ss_pred cccCCChHHHHHHHhhhhC
Q 025730 231 DGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 231 TG~~~~~~e~i~~i~~~~~ 249 (249)
||.++ +.+.+..+|+++|
T Consensus 184 tG~~~-~~~~i~~~~~~~g 201 (406)
T TIGR01814 184 TGQLF-DMAAITRAAHAKG 201 (406)
T ss_pred cceec-CHHHHHHHHHHcC
Confidence 99995 6777778898875
No 212
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.23 E-value=2e-10 Score=105.17 Aligned_cols=113 Identities=13% Similarity=0.078 Sum_probs=95.9
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH----HHCCCEEEEecCCCC
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSD 202 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~----~~~G~~v~~v~~~~~ 202 (249)
.++....|.+.||++.| .+..+++++++.++..++.+++++||+|++....|......+ +..|+++..++.
T Consensus 60 ~nPt~~~le~~la~LEg--~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~--- 134 (395)
T PRK08114 60 GTLTHFSLQEAMCELEG--GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP--- 134 (395)
T ss_pred CChhHHHHHHHHHHHhC--CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC---
Confidence 45667889999999887 457888888999999999999999999999999997555443 558999999874
Q ss_pred CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhh
Q 025730 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEH 248 (249)
Q Consensus 203 ~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~ 248 (249)
.|.+.++++++ +++|+|++.+|.||+|.+ .+.+.+.++|+++
T Consensus 135 --~d~~~l~~~l~-~~TrlV~~EtpsNp~~~v-~DI~~Ia~ia~~~ 176 (395)
T PRK08114 135 --LIGADIAKLIQ-PNTKVVFLESPGSITMEV-HDVPAIVAAVRSV 176 (395)
T ss_pred --CCHHHHHHhcC-CCceEEEEECCCCCCCEe-ecHHHHHHHHHHh
Confidence 36799999998 689999999999999999 5778888888886
No 213
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.21 E-value=1.7e-10 Score=105.75 Aligned_cols=157 Identities=16% Similarity=0.190 Sum_probs=110.7
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCCCCCCCc-----ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~~~Yp~~-----g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..| ...++ .++.+.+++.+ +.....|+.. ...+|.+.++++++.+.+++++++|+++++..++
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al 113 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAAL 113 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHH
Confidence 34678999876 55666 77888888875 4444455432 3567899999999877889999999999999999
Q ss_pred HHhc--CCCCeEEEcCCCChhHHHHHHH-CC------------CEEEEecCCC------CCCCCHHHHHHhhcc--CCce
Q 025730 164 RCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKS------DFSLNVELIADAVER--EKPK 220 (249)
Q Consensus 164 ~~~~--~pGd~Vlv~~P~y~~~~~~~~~-~G------------~~v~~v~~~~------~~~id~e~l~~~i~~--~~~k 220 (249)
+.+. .++|+|++.+++|..+...... .+ .+++.+|.+. ++..|++.+++.+++ .+++
T Consensus 114 ~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 193 (413)
T cd00610 114 KLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVA 193 (413)
T ss_pred HHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEE
Confidence 8763 5789999999999865443332 22 2355666442 244589999999874 2455
Q ss_pred EEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 221 CIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 221 ~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+|++...+|++|.+++.. +.+.++|++||
T Consensus 194 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 225 (413)
T cd00610 194 AVIVEPIQGEGGVIVPPPGYLKALRELCRKHG 225 (413)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 555444456779876543 45778888875
No 214
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.20 E-value=3.3e-10 Score=103.67 Aligned_cols=151 Identities=20% Similarity=0.260 Sum_probs=110.1
Q ss_pred CCCCeeeccCC--CCCCCC-CHHHHHHHHh-ccC----CCCCCCcChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~~-p~~v~~al~~-~~~----~~~Yp~~g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~~ 163 (249)
.+.+.||+..+ .+.++. ++.+.+++.+ +.. ...|+.....+|.+.++++++.+ +++|++++|+++++..++
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al 120 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAF 120 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHH
Confidence 45678999876 455665 6888888765 321 24576555678999999998853 479999999999999999
Q ss_pred HHhcCCC-CeEEEcCCCChhHHHHHHH-CCCE------------EEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCC
Q 025730 164 RCVLDPG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (249)
Q Consensus 164 ~~~~~pG-d~Vlv~~P~y~~~~~~~~~-~G~~------------v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnN 229 (249)
+....+| ++|+..+++|..+...+.. .|.. +..+|. .|++.+++.++ .++++|+++.++|
T Consensus 121 ~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~-~~~~aviiep~~~ 194 (398)
T PRK03244 121 KLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVD-DDTAAVFLEPIQG 194 (398)
T ss_pred HHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhc-CCeEEEEEecccC
Confidence 9766676 5777778899766544332 2221 222221 37899999886 6899999999999
Q ss_pred ccccCCChH---HHHHHHhhhhC
Q 025730 230 PDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 230 PTG~~~~~~---e~i~~i~~~~~ 249 (249)
|+|.++++. +.+.++|++||
T Consensus 195 ~~G~~~~~~~~l~~l~~l~~~~~ 217 (398)
T PRK03244 195 EAGVVPPPAGYLAAAREITDRHG 217 (398)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcC
Confidence 999998765 46788999885
No 215
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.18 E-value=4.6e-10 Score=104.23 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=91.8
Q ss_pred CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHH----HHHHHCCCEEEEecCCCCC
Q 025730 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDF 203 (249)
Q Consensus 128 ~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~----~~~~~~G~~v~~v~~~~~~ 203 (249)
.+....|++.+++++|. .+.|++++|. .++.+++.+++++||+|+++...|.... ..++..|++++.++. .
T Consensus 68 ~pt~~~le~~la~l~g~-~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~-- 142 (437)
T PRK05613 68 NPTVEALENRIASLEGG-VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN-P-- 142 (437)
T ss_pred ChHHHHHHHHHHHHhCC-CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC-C--
Confidence 34578899999999986 3455555554 7888888888999999999999998543 344668999999972 1
Q ss_pred CCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 204 SLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 204 ~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.|+++++++++ +++|+|++.++.||+|.+ .+.+.+.++|+++|
T Consensus 143 -~d~e~l~~~l~-~~tk~V~~e~~~Np~~~v-~di~~I~~la~~~g 185 (437)
T PRK05613 143 -DDPESWQAAVQ-PNTKAFFGETFANPQADV-LDIPAVAEVAHRNQ 185 (437)
T ss_pred -CCHHHHHHhCC-ccCeEEEEECCCCCCCcc-cCHHHHHHHHHHcC
Confidence 28999999998 689999999999999977 67788888999875
No 216
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.18 E-value=5.1e-10 Score=101.03 Aligned_cols=108 Identities=13% Similarity=0.153 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEc---CCCChhHHHHHHHCCCEEEEecCCCCCCCCH
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC---PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~---~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~ 207 (249)
..+|++.+|+++|++++++++++|+++++..++.+++++||+|+++ .|+|..|...++..|++++.+ .|+
T Consensus 56 ~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~-------~~l 128 (346)
T TIGR03576 56 EEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES-------DEL 128 (346)
T ss_pred HHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEecc-------CCH
Confidence 6789999999999999999999999999999999999999999975 478889999999999987443 245
Q ss_pred HHHHHhhccCCceEEEEcCCCCccccCCChHH--HHHHHhhhhC
Q 025730 208 ELIADAVEREKPKCIFLTSPNNPDGRFSWTSS--WIWGISSEHN 249 (249)
Q Consensus 208 e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e--~i~~i~~~~~ 249 (249)
++++. . .++++|+++ ++|++|.+++.++ .+..+|+++|
T Consensus 129 ~~l~~-~--~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~ 168 (346)
T TIGR03576 129 SELKK-I--DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKE 168 (346)
T ss_pred HHHhh-C--cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcC
Confidence 55432 2 467888874 5789999986554 4566777764
No 217
>PLN02822 serine palmitoyltransferase
Probab=99.17 E-value=8.2e-10 Score=103.86 Aligned_cols=154 Identities=15% Similarity=0.146 Sum_probs=110.4
Q ss_pred CCCCeeeccCCCC-CCCCCHHHHHHHHh-cc-CCC-------CC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~-~~~~p~~v~~al~~-~~-~~~-------~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~ 161 (249)
.+.+.|+|..+.. .+..++.+++++.+ +. ++. .| +.....+|+++|+++++. ++.|++++|.+ ++..
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-~~~i~~s~G~~-a~~s 184 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-PDSILYSYGLS-TIFS 184 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-CCEEEECCHHH-HHHH
Confidence 3467899998754 56678888888765 32 222 23 233478999999999995 46899998887 5788
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCC--CCCCHHHHHHhhc-cCCc-eEEEEcCCCCccccCCCh
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVE-REKP-KCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~--~~id~e~l~~~i~-~~~~-k~i~l~~PnNPTG~~~~~ 237 (249)
++.+++++||.|++....|..+...+...|.+++.++.++. +..+++++++..+ .+++ ++|++..++|+||.+.+
T Consensus 185 ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~- 263 (481)
T PLN02822 185 VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP- 263 (481)
T ss_pred HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC-
Confidence 88899999999998888777777777889999999985421 1122222222111 1234 68888889999999965
Q ss_pred HHHHHHHhhhhC
Q 025730 238 SSWIWGISSEHN 249 (249)
Q Consensus 238 ~e~i~~i~~~~~ 249 (249)
.+.+.++|++||
T Consensus 264 L~~i~~l~~k~~ 275 (481)
T PLN02822 264 LDEIVRLKEKYR 275 (481)
T ss_pred HHHHHHHHHHcC
Confidence 677888999886
No 218
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.17 E-value=1.3e-10 Score=102.35 Aligned_cols=139 Identities=22% Similarity=0.318 Sum_probs=108.4
Q ss_pred CCHHHHHHHHhccCC-CCCC-CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh---hH
Q 025730 109 PPPEVREALGQLKFP-YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT---MY 183 (249)
Q Consensus 109 ~p~~v~~al~~~~~~-~~Yp-~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~---~~ 183 (249)
+.+.+.+++.+...+ ..|. |+...+|++.+++++|. +..+++.+++.+-.++++.+++|++.|++..+.|. ..
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~--e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ 84 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGK--EAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET 84 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCC--CEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence 557888888653322 3685 45688999999999994 56678999999999999999999999999999885 22
Q ss_pred HHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-----CCceEEEEcCCCCcc-ccCCChHHH--HHHHhhhhC
Q 025730 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 184 ~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~~~k~i~l~~PnNPT-G~~~~~~e~--i~~i~~~~~ 249 (249)
.......|++++.++..+++.+|+++|+++++. .++++|+|++|+|-. |.+++.+++ +..+|++||
T Consensus 85 ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~g 158 (290)
T PF01212_consen 85 GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHG 158 (290)
T ss_dssp THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT
T ss_pred chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCc
Confidence 333456999999999755588999999999975 457999999999975 778888755 788999986
No 219
>PLN02483 serine palmitoyltransferase
Probab=99.17 E-value=4.5e-10 Score=105.79 Aligned_cols=147 Identities=14% Similarity=0.149 Sum_probs=104.6
Q ss_pred CCeeeccCCC------CCCCCCHHHHHHHHhccC---C--CCCC-CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 95 EDIVKIDANE------NPYGPPPEVREALGQLKF---P--YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 95 ~~~I~L~~~~------~~~~~p~~v~~al~~~~~---~--~~Yp-~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
...++|+++. ++..+++.+.+++.+... . ..|. .....+|++++|+++|. ++.|++++|... ...+
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-~~ai~~~~G~~a-n~~~ 177 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-PAAIVFGMGYAT-NSTI 177 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-CcEEEECCHHHH-HHHH
Confidence 4567777763 222334677788776321 2 2364 45688999999999994 567888777554 4467
Q ss_pred HHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc------CCc-----eEEEEcCC-CCc
Q 025730 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCIFLTSP-NNP 230 (249)
Q Consensus 163 ~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~------~~~-----k~i~l~~P-nNP 230 (249)
+.+++++||.|++.+|+|..+...++..|++++.++.+ |.+++++.+++ +++ ++++++++ .|+
T Consensus 178 i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~ 252 (489)
T PLN02483 178 IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSM 252 (489)
T ss_pred HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCC
Confidence 77789999999999999999999999999999999853 34555554431 222 66666655 599
Q ss_pred cccCCChHHHHHHHhhhhC
Q 025730 231 DGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 231 TG~~~~~~e~i~~i~~~~~ 249 (249)
+|.+ .+.+.+.++|++||
T Consensus 253 ~G~~-~~l~~I~~la~~~~ 270 (489)
T PLN02483 253 EGEL-CKLPEIVAVCKKYK 270 (489)
T ss_pred CCcc-cCHHHHHHHHHHcC
Confidence 9999 46666777888875
No 220
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.17 E-value=1.3e-10 Score=92.94 Aligned_cols=86 Identities=24% Similarity=0.501 Sum_probs=67.4
Q ss_pred CCCCeeeccCCCCC-----------------CCCCHHHHHHHHhccCCCCCCC-cChHHHHHHHHHHc----C----CCC
Q 025730 93 KPEDIVKIDANENP-----------------YGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS----G----LES 146 (249)
Q Consensus 93 ~~~~~I~L~~~~~~-----------------~~~p~~v~~al~~~~~~~~Yp~-~g~~~lr~~la~~~----~----~~~ 146 (249)
.+..+|+|+.+||. +.+|+.+.+++..+ ..|++ .|..+||+++|+|+ | +++
T Consensus 41 np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p 117 (153)
T PLN02994 41 NPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI---ALFQDYHGLANFRKAIANFMAEARGGRVKFDA 117 (153)
T ss_pred CCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccch
Confidence 45668888888773 33334444444442 33744 58999999999997 4 468
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~ 181 (249)
++|++|+|+++++.+++.++++|||.|++++|+|.
T Consensus 118 d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 118 DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 89999999999999999999999999999999996
No 221
>PRK02769 histidine decarboxylase; Provisional
Probab=99.16 E-value=4.4e-10 Score=102.66 Aligned_cols=117 Identities=12% Similarity=0.005 Sum_probs=97.9
Q ss_pred HHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCH
Q 025730 132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207 (249)
Q Consensus 132 ~~lr~~la~~~~~~~~~I--~vt~Ga~~~l~~~~~~~--~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~ 207 (249)
.+.++.+++++|++++++ ++|+|+||+....+... ..++++|++++-.|......++..|.+...|+.+.++.+|+
T Consensus 68 ~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~ 147 (380)
T PRK02769 68 RDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDY 147 (380)
T ss_pred HHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcH
Confidence 467788889999876654 88999999977665433 35789999999999988888898999988898777888999
Q ss_pred HHHHHhhccC--CceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 208 ELIADAVERE--KPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 208 e~l~~~i~~~--~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++|++++++. ++.+|+++.++|+||.+ .+.+.+..+|+++|
T Consensus 148 ~~L~~~i~~~~~~t~lvv~t~gtt~tG~i-dpi~~I~~i~~~~g 190 (380)
T PRK02769 148 DDLISKIKENKNQPPIIFANIGTTMTGAI-DNIKEIQEILKKIG 190 (380)
T ss_pred HHHHHHHHhCCCCcEEEEEEeCCCCCccc-CCHHHHHHHHHHhC
Confidence 9999999732 38899999999999999 67788888998875
No 222
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.15 E-value=5.6e-10 Score=101.86 Aligned_cols=154 Identities=16% Similarity=0.194 Sum_probs=105.7
Q ss_pred CCCCeeeccCC--CCCCCC-CHHHHHHHHh-ccC----CCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~~-p~~v~~al~~-~~~----~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...||+..+ .+.++. .+.+.+++.+ +.. ...|+.+...+|.+.++++.+ .+++++++|+++++.++++
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~gg~eA~~~al~ 114 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSG--MDKVFFCNSGAEANEAAIK 114 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcC--CCEEEECCCcHHHHHHHHH
Confidence 45667899876 345665 4788888765 322 134554445567777777766 4799999999999999999
Q ss_pred HhcCCC-------CeEEEcCCCChhHHHHHHHCCCEEE----EecCCCCC----CCCHHHHHHhhccCCceEEEEcCCCC
Q 025730 165 CVLDPG-------DKIVDCPPTFTMYEFDAAVNGAAVV----KVPRKSDF----SLNVELIADAVEREKPKCIFLTSPNN 229 (249)
Q Consensus 165 ~~~~pG-------d~Vlv~~P~y~~~~~~~~~~G~~v~----~v~~~~~~----~id~e~l~~~i~~~~~k~i~l~~PnN 229 (249)
.+...+ ++|++..++|..+.......+.... ..+...++ ..|++++++++. .++++|+++.++|
T Consensus 115 ~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~~ 193 (396)
T PRK02627 115 LARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQG 193 (396)
T ss_pred HHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEecccC
Confidence 765433 6799999999876655444332221 11121211 228999999996 6899999999999
Q ss_pred ccc-cCCChH--HHHHHHhhhhC
Q 025730 230 PDG-RFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 230 PTG-~~~~~~--e~i~~i~~~~~ 249 (249)
|+| .+++++ +.+.++|++||
T Consensus 194 ~~G~~~~~~~~l~~l~~l~~~~~ 216 (396)
T PRK02627 194 EGGVNPADKEYLQALRELCDENG 216 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHcC
Confidence 999 465554 45778898875
No 223
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.15 E-value=3.3e-10 Score=101.27 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=75.1
Q ss_pred CCC-CC-cChHHHHHHHHHHcCCCCCCEEEeCCHH-HHHHHHHH-Hh----cC--------CCCeEEEcCCCChhHHHHH
Q 025730 124 YIY-PD-PESRRLRAALAKDSGLESDHILVGCGAD-ELIDLIMR-CV----LD--------PGDKIVDCPPTFTMYEFDA 187 (249)
Q Consensus 124 ~~Y-p~-~g~~~lr~~la~~~~~~~~~I~vt~Ga~-~~l~~~~~-~~----~~--------pGd~Vlv~~P~y~~~~~~~ 187 (249)
.+| .. .|.+++|+.+++++|+++++|+++..++ ..++.++. ++ .. +.-+.|+|.|+|..+..++
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~ 141 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT 141 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH
T ss_pred cCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH
Confidence 788 43 5899999999999999999998855543 44433322 22 11 1247899999999999999
Q ss_pred HHCCCEEEEecCCCCCCCCHHHHHHhhc-cCCceEEEEcCC--CCccccCCChHHH
Q 025730 188 AVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLTSP--NNPDGRFSWTSSW 240 (249)
Q Consensus 188 ~~~G~~v~~v~~~~~~~id~e~l~~~i~-~~~~k~i~l~~P--nNPTG~~~~~~e~ 240 (249)
+.+|++.+.||+.++ ++|.|.+++.+. +..+|.|+ |-| +||||.+|+++..
T Consensus 142 E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiW-cVP~ySNPtG~tySde~v 195 (425)
T PF12897_consen 142 EHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIW-CVPKYSNPTGITYSDEVV 195 (425)
T ss_dssp HHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEE-E-SSS-TTT-----HHHH
T ss_pred HhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEE-eCCCccCCCCccCCHHHH
Confidence 999999999998554 799999999984 46789998 555 7999999877643
No 224
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.15 E-value=7.2e-10 Score=101.29 Aligned_cols=116 Identities=26% Similarity=0.298 Sum_probs=94.8
Q ss_pred CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHH----HCCCEEEEecCC
Q 025730 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK 200 (249)
Q Consensus 125 ~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~----~~G~~v~~v~~~ 200 (249)
||.++....|.+.|++..| .+.++++++++.++..++.+++++||+|++....|......++ ..|.++.+++.
T Consensus 51 R~gnPt~~~le~~la~Le~--g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~- 127 (386)
T PF01053_consen 51 RYGNPTVRALEQRLAALEG--GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP- 127 (386)
T ss_dssp TTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred ccccccHHHHHHHHHHhhc--ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence 3345567889999999998 4678999999999999999999999999999999986554444 37999999864
Q ss_pred CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 201 ~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
-|+++++++++ +++++||+.+|.||+..+ .+.+.+.++++++|
T Consensus 128 ----~d~~~l~~~l~-~~t~~v~~EspsNP~l~v-~Dl~~i~~~a~~~g 170 (386)
T PF01053_consen 128 ----TDLEALEAALR-PNTKLVFLESPSNPTLEV-PDLEAIAKLAKEHG 170 (386)
T ss_dssp ----TSHHHHHHHHC-TTEEEEEEESSBTTTTB----HHHHHHHHHHTT
T ss_pred ----hhHHHHHhhcc-ccceEEEEEcCCCccccc-ccHHHHHHHHHHhC
Confidence 37899999998 699999999999999999 67888888999875
No 225
>PLN03032 serine decarboxylase; Provisional
Probab=99.13 E-value=6.2e-10 Score=101.34 Aligned_cols=118 Identities=15% Similarity=0.036 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHHHHhc--CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCC
Q 025730 131 SRRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I--~vt~Ga~~~l~~~~~~~~--~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id 206 (249)
..++++.+++++|.+++++ ++|+|+|++....+.... .+++.|+++.-.|......++..|.++..||.+.++.+|
T Consensus 68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id 147 (374)
T PLN03032 68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEID 147 (374)
T ss_pred HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCc
Confidence 3568888888899988876 999999999988876543 355689999999988888899999999999988889999
Q ss_pred HHHHHHhhccC--CceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 207 VELIADAVERE--KPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 207 ~e~l~~~i~~~--~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+++|++++++. ++.+|+++..||+||.+ ++.+.+..+|+++|
T Consensus 148 ~~~L~~~i~~~~~~~~lvv~tagtt~tG~i-dpi~eI~~i~~~~g 191 (374)
T PLN03032 148 YDDLERALAKNRDKPAILNVNIGTTVKGAV-DDLDRILRILKELG 191 (374)
T ss_pred HHHHHHHHHHcCCCCEEEEEEecCcCCccC-CCHHHHHHHHHHhC
Confidence 99999999732 46788888899999999 78888899999874
No 226
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.13 E-value=5.5e-10 Score=111.86 Aligned_cols=150 Identities=15% Similarity=0.099 Sum_probs=118.2
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh---ccCCCCC-CCc---C----hHHHHHHHHHHcCCCCCCEEEeCCHH----HHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ---LKFPYIY-PDP---E----SRRLRAALAKDSGLESDHILVGCGAD----ELI 159 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~---~~~~~~Y-p~~---g----~~~lr~~la~~~~~~~~~I~vt~Ga~----~~l 159 (249)
..+|+|++-.+-+.+ .+.+.... ....+-| |.. | ..++|+.+++++|. ++|.++.+++ +++
T Consensus 525 ~~~~plgsctmk~n~--~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~ 600 (993)
T PLN02414 525 HSMIPLGSCTMKLNA--TTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAG 600 (993)
T ss_pred cCCccCcccccccCc--hhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHH
Confidence 345777776666643 22222222 2233555 431 3 45889999999996 8999999999 999
Q ss_pred HHHHHHhcCC-CC----eEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc--CCceEEEEcCCCCccc
Q 025730 160 DLIMRCVLDP-GD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDG 232 (249)
Q Consensus 160 ~~~~~~~~~p-Gd----~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~--~~~k~i~l~~PnNPTG 232 (249)
.++++.+.++ || +|+++...|......+...|++++.++.++++.+|+++|+++++. .++++|++++|||-+|
T Consensus 601 ~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg 680 (993)
T PLN02414 601 LMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGV 680 (993)
T ss_pred HHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCcccc
Confidence 9999999876 88 899999999988888888999999999888889999999999984 3689999999999988
Q ss_pred cCCChHHHHHHHhhhhC
Q 025730 233 RFSWTSSWIWGISSEHN 249 (249)
Q Consensus 233 ~~~~~~e~i~~i~~~~~ 249 (249)
.. .+.+.+.++|+++|
T Consensus 681 ~e-~~I~eI~~iah~~G 696 (993)
T PLN02414 681 YE-EGIDEICDIIHDNG 696 (993)
T ss_pred cc-chHHHHHHHHHHcC
Confidence 88 67788888898875
No 227
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.10 E-value=1e-09 Score=100.37 Aligned_cols=113 Identities=14% Similarity=0.148 Sum_probs=89.4
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh----hHHHHHHHCCCEEEEecCCCC
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSD 202 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~----~~~~~~~~~G~~v~~v~~~~~ 202 (249)
..+...+|.+.++++.|. +..+++++++.+|.+++.+++++||+|+++.+.|. .+...+...|++++.++.++.
T Consensus 62 ~~P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~ 139 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL 139 (384)
T ss_pred CChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence 455678999999999984 56788888899999999999999999999887665 333555668999999986432
Q ss_pred CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 ~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..++ ++..++|+|++.+|+|||+.+ .+.+.+.++|++++
T Consensus 140 ~~~~-------l~~~~tklv~~e~~snpt~~v-~Di~~I~~la~~~~ 178 (384)
T PRK06434 140 NSLD-------FDPSNYDLIYAESITNPTLKV-PDIKNVSSFCHEND 178 (384)
T ss_pred hhee-------ecCCCeeEEEEEcCCCCCcee-ecHHHHHHHHHHcC
Confidence 2222 232478999999999999998 67788888998875
No 228
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.06 E-value=3.8e-09 Score=97.40 Aligned_cols=135 Identities=13% Similarity=0.167 Sum_probs=102.8
Q ss_pred HHHHHH-HHhccCC-CCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh-hHHHH
Q 025730 111 PEVREA-LGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFD 186 (249)
Q Consensus 111 ~~v~~a-l~~~~~~-~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~-~~~~~ 186 (249)
..+.++ +..+..+ ..| .++...+|.+++++++|. ++++.+++++.++++++...++|||.| +.++|. .+...
T Consensus 50 ~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~--~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ah 125 (450)
T TIGR02618 50 NAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGF--KYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYH 125 (450)
T ss_pred HHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHH
Confidence 455555 5543222 458 567789999999999994 579999999999999887789999987 667774 45544
Q ss_pred HHHCCCEEEEecC----------CCCCCCCHHHHHHhhccC---CceEEEEcCCCCcc-ccCCChH--HHHHHHhhhhC
Q 025730 187 AAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 187 ~~~~G~~v~~v~~----------~~~~~id~e~l~~~i~~~---~~k~i~l~~PnNPT-G~~~~~~--e~i~~i~~~~~ 249 (249)
.+..|+.++.++. ..++.+|++++++++++. ++++|.+.+++|-. |..++.. +.+..+|++||
T Consensus 126 Ie~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~G 204 (450)
T TIGR02618 126 QEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHG 204 (450)
T ss_pred HHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcC
Confidence 6889997777743 235788999999999742 45688888999865 7887654 66889999986
No 229
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.05 E-value=4e-09 Score=96.73 Aligned_cols=119 Identities=14% Similarity=0.152 Sum_probs=90.6
Q ss_pred CCC-cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCC
Q 025730 126 YPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204 (249)
Q Consensus 126 Yp~-~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~ 204 (249)
|.. ....+|++++|+++|.+ +.+++++|.+..+ .++.+++++||.|++.++.|..+...+...+++++.++..+ .
T Consensus 39 yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~~a~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d--~ 114 (392)
T PLN03227 39 YGTIDAHLELEQCMAEFLGTE-SAILYSDGASTTS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND--M 114 (392)
T ss_pred cCChHHHHHHHHHHHHHhCCC-cEEEecCcHHHHH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC--H
Confidence 543 35789999999999975 6788888877666 66667899999999999999988777777888888776431 1
Q ss_pred CCHHHHHHhhc----------cCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 205 LNVELIADAVE----------REKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 205 id~e~l~~~i~----------~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
-|++.+.+.+. ..++++|++.++.||+|.+. +.+.+.++|++||
T Consensus 115 ~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~-~l~~i~~l~~~~g 168 (392)
T PLN03227 115 KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA-PLKELVALKEEFH 168 (392)
T ss_pred HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc-CHHHHHHHHHHcC
Confidence 13444444442 13578999999999999995 4667788999886
No 230
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.03 E-value=1e-08 Score=93.98 Aligned_cols=147 Identities=20% Similarity=0.199 Sum_probs=101.3
Q ss_pred CCeeeccCCC-CCCCCCHHHHHHHHh-cc-CCC-------CC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 95 EDIVKIDANE-NPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 95 ~~~I~L~~~~-~~~~~p~~v~~al~~-~~-~~~-------~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.++++|+.|+ ..+...|.+++++.+ +. .+. .| ..+...+|++.+++++|. ++ .++.++++++...++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-~~-~l~~~sG~~an~~ai 122 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-ES-ALVFTSGYVANDATL 122 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-Ce-EEEECchHHHHHHHH
Confidence 3467777664 556778888888865 32 111 12 122367899999999994 33 444455577888888
Q ss_pred HHhcC--CCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---CCceEEEEcCCCCccccCCChH
Q 025730 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 164 ~~~~~--pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
..+.. +||.|+.....|......+...|+++..++. .|++++++.++. .++++|++++|+||||.+. +.
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~-~l 196 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA-PI 196 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc-CH
Confidence 77654 6777777666676666666778887766643 266777776642 3578999999999999995 56
Q ss_pred HHHHHHhhhhC
Q 025730 239 SWIWGISSEHN 249 (249)
Q Consensus 239 e~i~~i~~~~~ 249 (249)
+.+.++|++||
T Consensus 197 ~~i~~l~~~~~ 207 (402)
T TIGR01821 197 EEICDLADKYG 207 (402)
T ss_pred HHHHHHHHHcC
Confidence 77778898875
No 231
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.03 E-value=6.4e-09 Score=94.75 Aligned_cols=117 Identities=19% Similarity=0.162 Sum_probs=95.8
Q ss_pred CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHH----HHHHCCCEEEEecCC
Q 025730 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK 200 (249)
Q Consensus 125 ~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~----~~~~~G~~v~~v~~~ 200 (249)
++.++....|.++++.+-| .++.+.+++++.+|..++..++++||+|+++...|..... ..+.+|.++.+++..
T Consensus 59 R~~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~ 136 (396)
T COG0626 59 RTGNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG 136 (396)
T ss_pred cCCCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC
Confidence 3356678889999999987 6778889999999999999999999999999999974333 334489999988742
Q ss_pred CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 201 ~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.+++++++..+++|+||+-+|.|||-.+ .+...+.++++++|
T Consensus 137 -----~~~~~~~~~~~~~tk~v~lEtPsNP~l~v-~DI~~i~~~A~~~g 179 (396)
T COG0626 137 -----DDEALEAAIKEPNTKLVFLETPSNPLLEV-PDIPAIARLAKAYG 179 (396)
T ss_pred -----ChHHHHHHhcccCceEEEEeCCCCccccc-ccHHHHHHHHHhcC
Confidence 44667777663589999999999999999 68888899998875
No 232
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.00 E-value=8.1e-09 Score=94.31 Aligned_cols=154 Identities=18% Similarity=0.289 Sum_probs=105.6
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+. ..++ ..|.+.+++.+ +... ..|..+...+|.+.|++..+ .+++++++|+++++..+++
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~~al~ 106 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVECAIK 106 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHHHHHH
Confidence 355678887742 2232 45777877765 3321 22333335667777777664 4689999999999999988
Q ss_pred Hh----cCCCC----eEEEcCCCChhHHHHHHHCCCEEEEe----cCCCCCC----CCHHHHHHhhccCCceEEEEcCCC
Q 025730 165 CV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSPN 228 (249)
Q Consensus 165 ~~----~~pGd----~Vlv~~P~y~~~~~~~~~~G~~v~~v----~~~~~~~----id~e~l~~~i~~~~~k~i~l~~Pn 228 (249)
.. ..+|| +|++.++.|..+...+...+...... +...++. .|++.++++++ .++++|+++.++
T Consensus 107 ~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~avivep~~ 185 (389)
T PRK01278 107 TARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT-PNTAAILIEPIQ 185 (389)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC-CCeEEEEEeccc
Confidence 65 45676 99999999987766665544433222 1112222 58999999997 589999988778
Q ss_pred Cccc-cCCChH--HHHHHHhhhhC
Q 025730 229 NPDG-RFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 229 NPTG-~~~~~~--e~i~~i~~~~~ 249 (249)
||+| .+++.+ +.+.++|++||
T Consensus 186 ~~~G~~~~~~~~l~~l~~l~~~~g 209 (389)
T PRK01278 186 GEGGIRPAPDEFLKGLRQLCDENG 209 (389)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcC
Confidence 8898 565665 44788999886
No 233
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.99 E-value=4e-09 Score=91.36 Aligned_cols=151 Identities=17% Similarity=0.249 Sum_probs=100.8
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHH----hc-------cCCCCCC-CcChHHHHHHHHHHc------CCCCCCEEEeCC
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALG----QL-------KFPYIYP-DPESRRLRAALAKDS------GLESDHILVGCG 154 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~----~~-------~~~~~Yp-~~g~~~lr~~la~~~------~~~~~~I~vt~G 154 (249)
..+..|-|+.|.+.. . |++.+.++ ++ +..-+|. ..|...|.+++++++ ++..++|.+|+|
T Consensus 28 rt~g~imLggGNPa~-i-Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnG 105 (417)
T COG3977 28 RTPGAIMLGGGNPAR-I-PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNG 105 (417)
T ss_pred cCCCceeeCCCCccc-C-hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCC
Confidence 345578887766543 3 34433332 21 1225784 457888888888875 467899999999
Q ss_pred HHHHHHHHHHHhcC---CC--CeEEE-cCCCChhHHHHHHHCCCEEEEe-c---CC----CCCCCCHHHHHHhhccCCce
Q 025730 155 ADELIDLIMRCVLD---PG--DKIVD-CPPTFTMYEFDAAVNGAAVVKV-P---RK----SDFSLNVELIADAVEREKPK 220 (249)
Q Consensus 155 a~~~l~~~~~~~~~---pG--d~Vlv-~~P~y~~~~~~~~~~G~~v~~v-~---~~----~~~~id~e~l~~~i~~~~~k 220 (249)
++.+++-++..+.. .| .+|+. ..|.|..|....-.-.. .+.+ | .. -.+.+|++++.- . +++.
T Consensus 106 SQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~-fVs~kP~iel~~~g~FKY~vDF~~l~i--~-e~~g 181 (417)
T COG3977 106 SQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL-FVSAKPNIELLPAGQFKYHVDFEHLHI--G-ESTG 181 (417)
T ss_pred ccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc-eeeccCCcccccccceeeccCHHHccc--c-cccc
Confidence 99999999987743 34 34544 48888888765432111 2222 2 11 125678888754 2 6789
Q ss_pred EEEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 221 CIFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 221 ~i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
+|+++.|.||||.+++++|+ +..++++||
T Consensus 182 ~ic~SRPtNPTGNVlTdeE~~kldalA~~~g 212 (417)
T COG3977 182 AICVSRPTNPTGNVLTDEELAKLDALARQHG 212 (417)
T ss_pred eEEecCCCCCCCCcccHHHHHHHHHHhhhcC
Confidence 99999999999999999977 566888775
No 234
>PRK09064 5-aminolevulinate synthase; Validated
Probab=98.96 E-value=2.7e-08 Score=91.35 Aligned_cols=147 Identities=17% Similarity=0.151 Sum_probs=101.4
Q ss_pred CCeeeccCCC-CCCCCCHHHHHHHHh-cc-CC-------CCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 95 EDIVKIDANE-NPYGPPPEVREALGQ-LK-FP-------YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 95 ~~~I~L~~~~-~~~~~p~~v~~al~~-~~-~~-------~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.++++|+.|+ -.++.+|.+.+++.+ +. .+ ..| +.+...+|++.+++++|. ++.+++++| .++...++
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-~~~~~~~sG-~~an~~ai 123 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-EAALVFTSG-YVSNDATL 123 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-CcEEEECcH-HHHHHHHH
Confidence 4578887764 456778889888865 32 11 123 344578899999999994 455666666 45655555
Q ss_pred HHhcC--CCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---CCceEEEEcCCCCccccCCChH
Q 025730 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 164 ~~~~~--pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
..++. +++.|+.....|......+...|+++..++. .|++++++.++. .++++|++++|+||+|.+. +.
T Consensus 124 ~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~-~l 197 (407)
T PRK09064 124 STLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA-PI 197 (407)
T ss_pred HHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc-CH
Confidence 55543 7777766666666655566667887766653 367777777652 4689999999999999985 56
Q ss_pred HHHHHHhhhhC
Q 025730 239 SWIWGISSEHN 249 (249)
Q Consensus 239 e~i~~i~~~~~ 249 (249)
+.+.++|+++|
T Consensus 198 ~~i~~l~~~~~ 208 (407)
T PRK09064 198 AEICDLADKYN 208 (407)
T ss_pred HHHHHHHHHcC
Confidence 77778898875
No 235
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.94 E-value=1.8e-08 Score=87.67 Aligned_cols=144 Identities=16% Similarity=0.193 Sum_probs=113.3
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCc--ChHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC-Ch
Q 025730 106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPT-FT 181 (249)
Q Consensus 106 ~~~~p~~v~~al~~~~~~~~Yp~~--g~~~lr~~la~~~~~~~~-~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~-y~ 181 (249)
|...|+.+++++..-..++.-|+- -..++++-+...|..... -.++...++.+++.++-.++.|||.|++..-+ |.
T Consensus 25 Psnl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg 104 (385)
T KOG2862|consen 25 PSNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWG 104 (385)
T ss_pred CcCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHH
Confidence 444678888888763333444542 256777777777765443 34455556789999999999999999976544 54
Q ss_pred -hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 182 -MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 182 -~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.+..+++.+|++|..|+.+.+....++.|.+++.++++++|++++-..-||+..+..+...++|++|+
T Consensus 105 ~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~ 173 (385)
T KOG2862|consen 105 QRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHE 173 (385)
T ss_pred HHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCC
Confidence 67788888999999999888888999999999999999999999999999999555789999999874
No 236
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.93 E-value=2.2e-08 Score=99.64 Aligned_cols=150 Identities=15% Similarity=0.051 Sum_probs=104.5
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHhc-c----CC-CCCCC-----cChHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQL-K----FP-YIYPD-----PESRRLRAALAKDSGLESD--HILVGCGADELIDLI 162 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~~-~----~~-~~Yp~-----~g~~~lr~~la~~~~~~~~--~I~vt~Ga~~~l~~~ 162 (249)
+++.|+.+.....++..+.+++... . .. ..|.. ....+.|+.+++++|.+++ .|++|.|+|++|+++
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlv 113 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLV 113 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHH
Confidence 3689999876654555666665432 1 11 11211 1256899999999999765 489999999999999
Q ss_pred HHHh-cCCCCeEEEcCCCCh---hHHHHHHHCCCEEEEecCC--------CCCCCCH--HHHHHhhc---------cCCc
Q 025730 163 MRCV-LDPGDKIVDCPPTFT---MYEFDAAVNGAAVVKVPRK--------SDFSLNV--ELIADAVE---------REKP 219 (249)
Q Consensus 163 ~~~~-~~pGd~Vlv~~P~y~---~~~~~~~~~G~~v~~v~~~--------~~~~id~--e~l~~~i~---------~~~~ 219 (249)
+..+ +++||+|++..-.|. .+...++..|+++..++.+ ....+++ +++++.++ ..++
T Consensus 114 a~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t 193 (805)
T PLN02724 114 GETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAY 193 (805)
T ss_pred HHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCc
Confidence 9887 789999999877775 3334455679999998864 2233433 56666531 1456
Q ss_pred eEEEEcCCCCccccCCChHHHHHHHhh
Q 025730 220 KCIFLTSPNNPDGRFSWTSSWIWGISS 246 (249)
Q Consensus 220 k~i~l~~PnNPTG~~~~~~e~i~~i~~ 246 (249)
++|.+++-+|-||.+++.+ ++..+++
T Consensus 194 ~LVa~~~vsN~tG~i~pi~-~i~~~~~ 219 (805)
T PLN02724 194 NLFAFPSECNFSGAKFPLD-LVKLIKD 219 (805)
T ss_pred ceEEEEccccCCCCcCCHH-HHHHHHH
Confidence 8999999999999997665 5555544
No 237
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.90 E-value=2.5e-08 Score=90.37 Aligned_cols=117 Identities=21% Similarity=0.187 Sum_probs=97.8
Q ss_pred CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH----HHCCCEEEEecC
Q 025730 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (249)
Q Consensus 124 ~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~----~~~G~~v~~v~~ 199 (249)
.+++++....|...+++..|. .+.++.++++.++..++..++..|+++++.+..|.....++ ..+|++...++.
T Consensus 72 sr~~nPt~~~le~~iaal~ga--~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 72 SRSGNPTRDVLESGIAALEGA--AHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred ccCCCCchHHHHHHHHHHhCC--ceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 344566778899999999984 45888888899999999999999999999999997544433 347888888875
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+ |+++++++++ +++++||+-+|.||+..+ ++.+.+.++|+++|
T Consensus 150 ~-----~~~~~~~~i~-~~t~~V~~ESPsNPll~v-~DI~~l~~la~~~g 192 (409)
T KOG0053|consen 150 D-----DLKKILKAIK-ENTKAVFLESPSNPLLKV-PDIEKLARLAHKYG 192 (409)
T ss_pred h-----hHHHHHHhhc-cCceEEEEECCCCCcccc-ccHHHHHHHHhhCC
Confidence 3 6789999998 589999999999999999 78899999999875
No 238
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.90 E-value=1.8e-08 Score=93.54 Aligned_cols=116 Identities=16% Similarity=0.095 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHcCCC-C-CCEEE--eCCHHHHHHHHHHHhc--------CCC-----CeEEEcCCCChhHHHHHHHCCCE
Q 025730 131 SRRLRAALAKDSGLE-S-DHILV--GCGADELIDLIMRCVL--------DPG-----DKIVDCPPTFTMYEFDAAVNGAA 193 (249)
Q Consensus 131 ~~~lr~~la~~~~~~-~-~~I~v--t~Ga~~~l~~~~~~~~--------~pG-----d~Vlv~~P~y~~~~~~~~~~G~~ 193 (249)
..+.++.+++++|++ + +++.. |+|++|+..+++.+.. ..| -.|+++.-.|..+...++..|++
T Consensus 82 e~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~ 161 (431)
T TIGR01788 82 ENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVE 161 (431)
T ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCce
Confidence 356788888889987 3 45554 8999999998876542 112 36899999999999999989999
Q ss_pred EEEecCCCC-CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhh
Q 025730 194 VVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEH 248 (249)
Q Consensus 194 v~~v~~~~~-~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~ 248 (249)
+..++.+.+ +.+|+++|+++++ +++.+|+++..||.||.+ ++.+.+..+|+++
T Consensus 162 v~~i~~d~~~~~vd~~~L~~~i~-~~t~lV~~t~g~t~tG~i-dpi~~I~~i~~~~ 215 (431)
T TIGR01788 162 LREVPMDPGRYVIDPEQVVEAVD-ENTIGVVCILGTTYTGEY-EDVKALNDALDEY 215 (431)
T ss_pred eEEEecCCCceeeCHHHHHHHHh-hCCeEEEEEeCCCCCccc-CCHHHHHHHHHHH
Confidence 999997654 5799999999998 678999999999999999 7888888899887
No 239
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.84 E-value=8.3e-08 Score=85.16 Aligned_cols=145 Identities=20% Similarity=0.274 Sum_probs=108.1
Q ss_pred CCCCCCCCHHHHHHHHhcc--CCCCCCC-cChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 025730 103 NENPYGPPPEVREALGQLK--FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (249)
Q Consensus 103 ~~~~~~~p~~v~~al~~~~--~~~~Yp~-~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~ 179 (249)
++|--++.+++.++|.... ....|.+ +...++.+.+++.+|. ..++++.++|++..+.+.+.++||+.|++..-.
T Consensus 6 SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~a 83 (342)
T COG2008 6 SDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICHETA 83 (342)
T ss_pred cCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEeccc
Confidence 3555667789999998743 3367864 4578899999999996 789999999999999999999999999999888
Q ss_pred Chh-HHH-HHHH-CCCEEEEecCCCCCCCCHHHHHHhhccC-----CceEEEEcCCCCccccCCChHHH--HHHHhhhhC
Q 025730 180 FTM-YEF-DAAV-NGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGRFSWTSSW--IWGISSEHN 249 (249)
Q Consensus 180 y~~-~~~-~~~~-~G~~v~~v~~~~~~~id~e~l~~~i~~~-----~~k~i~l~~PnNPTG~~~~~~e~--i~~i~~~~~ 249 (249)
|.. ++. ..+. .++..+.+..+.++.+++|+|++++... .+.++++-|.+|--|++|+.+++ +..+|++||
T Consensus 84 Hi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~ 163 (342)
T COG2008 84 HIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHG 163 (342)
T ss_pred cceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhC
Confidence 852 221 1122 3444444445577899999999987632 24455555555578999999866 888999986
No 240
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=98.84 E-value=1.2e-07 Score=87.11 Aligned_cols=147 Identities=16% Similarity=0.087 Sum_probs=100.6
Q ss_pred CCeeeccCCCC-CCCCCHHHHHHHHh-cc-CCCC-------CC-CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 95 EDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYI-------YP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 95 ~~~I~L~~~~~-~~~~p~~v~~al~~-~~-~~~~-------Yp-~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.++++|..|+- .+...+++++++.+ +. .+.. +. .....+|++.+++++|. +..++.++++++...++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~An~~ai 122 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVSNWAAL 122 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHH
Confidence 35677777643 23456788888765 32 1111 11 11257899999999985 44444444556888888
Q ss_pred HHhcC--CCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---CCceEEEEcCCCCccccCCChH
Q 025730 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 164 ~~~~~--pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
..+.. +||.|++....|......+...|.++..++. .|++.+++.++. .++++|++++++|++|.+. +.
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~-~l 196 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA-PI 196 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh-CH
Confidence 76655 7887777777777766677778888877763 256666666542 3678999999999999995 56
Q ss_pred HHHHHHhhhhC
Q 025730 239 SWIWGISSEHN 249 (249)
Q Consensus 239 e~i~~i~~~~~ 249 (249)
+.+..+|+++|
T Consensus 197 ~~i~~l~~~~~ 207 (406)
T PRK13393 197 AEICDVAEKHG 207 (406)
T ss_pred HHHHHHHHHcC
Confidence 77788898875
No 241
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=98.84 E-value=1.1e-07 Score=88.63 Aligned_cols=135 Identities=17% Similarity=0.166 Sum_probs=98.1
Q ss_pred CCHHHHHHHHh-ccC-C-CCC--CC--c--ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 025730 109 PPPEVREALGQ-LKF-P-YIY--PD--P--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (249)
Q Consensus 109 ~p~~v~~al~~-~~~-~-~~Y--p~--~--g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~ 179 (249)
.++.+.+++.+ +.. . ..| .. . ....+++.+++++|.+ ..+++++++.++.+++.. +.+||+|++....
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae--~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e 169 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE--DALVVNNNAAAVLLALNT-LAKGKEVIVSRGE 169 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHH-hCCcCEEEECCCh
Confidence 56788888865 221 1 112 11 1 1478999999999964 355667777888888854 6899999999876
Q ss_pred Chh------HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcc--cc-CCChHHHHHHHhhhhC
Q 025730 180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--GR-FSWTSSWIWGISSEHN 249 (249)
Q Consensus 180 y~~------~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPT--G~-~~~~~e~i~~i~~~~~ 249 (249)
|.. +....+..|++++.++.+. ..|+++++++++ ++|++|++.+++|++ |. ...+.+.+..+|++||
T Consensus 170 ~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~-~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g 245 (454)
T TIGR00474 170 LVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAIT-ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHG 245 (454)
T ss_pred hhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcC-cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcC
Confidence 432 2345567899999997532 357999999998 789999999999995 64 2356778888999885
No 242
>PRK04311 selenocysteine synthase; Provisional
Probab=98.84 E-value=1.5e-07 Score=88.03 Aligned_cols=135 Identities=18% Similarity=0.165 Sum_probs=98.4
Q ss_pred CCHHHHHHHHh-ccCCC--CC--C--CcC--hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 025730 109 PPPEVREALGQ-LKFPY--IY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (249)
Q Consensus 109 ~p~~v~~al~~-~~~~~--~Y--p--~~g--~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~ 179 (249)
.++.+.+++.+ +.... .| . ..+ ...+++.+++++|.+ +.+++++++.++.+++.+ +.+||+|+++...
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e 174 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE--DALVVNNNAAAVLLALNA-LAAGKEVIVSRGE 174 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHH-hCCCCEEEEcchh
Confidence 56788888865 22111 11 1 112 468999999999954 577788888999988865 5899999998764
Q ss_pred Chh------HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCc--cccC-CChHHHHHHHhhhhC
Q 025730 180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP--DGRF-SWTSSWIWGISSEHN 249 (249)
Q Consensus 180 y~~------~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNP--TG~~-~~~~e~i~~i~~~~~ 249 (249)
+.. +....+..|++++.++.++ ..++++++++++ +++++|++++++|| +|.. ..+.+.+..+|++||
T Consensus 175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~-~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~g 250 (464)
T PRK04311 175 LVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAIN-ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHG 250 (464)
T ss_pred hhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcC-ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcC
Confidence 431 2335567899999998533 357999999998 78999999999998 4532 246778889999886
No 243
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.83 E-value=6.8e-08 Score=82.78 Aligned_cols=138 Identities=23% Similarity=0.273 Sum_probs=110.7
Q ss_pred CCHHHHHHHHhccCCC---CC---------CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEc
Q 025730 109 PPPEVREALGQLKFPY---IY---------PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176 (249)
Q Consensus 109 ~p~~v~~al~~~~~~~---~Y---------p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~ 176 (249)
.+++..+++.+...++ .| ..+-...+.+.+++|+|. |.+-+|+|+.++=+.++++++++||.|++.
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~--D~~R~t~GARe~KfavMhal~~~gd~vV~D 106 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGM--DEVRVTAGAREAKFAVMHALCKEGDWVVVD 106 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCC--ceeeecccchhhHHHHHHHhccCCCEEEEc
Confidence 4677778776532211 01 113367888999999994 578899999999999999999999999999
Q ss_pred CCCChhHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhcc------CCceEEEEcCCCCccccCCChHHHHHHHhhhh
Q 025730 177 PPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER------EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEH 248 (249)
Q Consensus 177 ~P~y~~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~------~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~ 248 (249)
...+......++.+|.++..||.. .++.+++|...+.+++ ..+.+.++++|..-.|.+ ++.+.++.||+++
T Consensus 107 ~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl-~Dakkva~ic~e~ 185 (382)
T COG1103 107 SLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL-ADAKKVAKICREY 185 (382)
T ss_pred CcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc-hhhHHHHHHHHHc
Confidence 999877777889999999999942 4688899888777643 237888999999889998 8899999999997
Q ss_pred C
Q 025730 249 N 249 (249)
Q Consensus 249 ~ 249 (249)
+
T Consensus 186 g 186 (382)
T COG1103 186 G 186 (382)
T ss_pred C
Confidence 5
No 244
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.83 E-value=8.8e-08 Score=88.98 Aligned_cols=117 Identities=15% Similarity=0.026 Sum_probs=92.4
Q ss_pred HHHHHHHHHHcCCCC-CCEEEeCCHH-HHHHHHHHHhc--C-CCCeEEEcCCCChhHHHHHHHCCCEEEEecC---CCCC
Q 025730 132 RRLRAALAKDSGLES-DHILVGCGAD-ELIDLIMRCVL--D-PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDF 203 (249)
Q Consensus 132 ~~lr~~la~~~~~~~-~~I~vt~Ga~-~~l~~~~~~~~--~-pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~---~~~~ 203 (249)
.+|.+.+++++|++. +..++++|+| .++.+++.++- . +||.|+++.-+|......+...|++++.++. ++++
T Consensus 108 ~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~ 187 (444)
T TIGR03531 108 NKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDEL 187 (444)
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCC
Confidence 567888888899863 4578888888 57777766543 1 5899999999999889999999999999993 4678
Q ss_pred CCCHHHHHHhhccC--CceEEEEcCCC-CccccCCChHHHHHHHhhhhC
Q 025730 204 SLNVELIADAVERE--KPKCIFLTSPN-NPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 204 ~id~e~l~~~i~~~--~~k~i~l~~Pn-NPTG~~~~~~e~i~~i~~~~~ 249 (249)
.+|++++++++++. +..++++++|+ +++|.. .+.+.+.++|++||
T Consensus 188 ~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~-ddL~eIa~la~k~g 235 (444)
T TIGR03531 188 TTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSP-DDIEEIAKICANYD 235 (444)
T ss_pred CcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcch-hCHHHHHHHHHHcC
Confidence 99999999999731 56777777776 344455 67788999999986
No 245
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.81 E-value=6.9e-08 Score=88.50 Aligned_cols=149 Identities=13% Similarity=0.156 Sum_probs=100.8
Q ss_pred CCCCeeeccCCCCCCC---CCHHHHHHHHh-ccC---CCC-CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANENPYG---PPPEVREALGQ-LKF---PYI-YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~---~p~~v~~al~~-~~~---~~~-Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+-.... ..+.+.+++.+ +.. ..+ ++.....+|.+.++++++. +.++++++++++++.+++
T Consensus 39 ~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al~ 116 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAIK 116 (401)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHH
Confidence 3456788766633222 25777777765 322 111 2333466799999998874 589999999999999998
Q ss_pred HhcC---------CC-CeEEEcCCCChhHHHHHHHCCC-------------EEEEecCCCCCCCCHHHHHHhhccCCceE
Q 025730 165 CVLD---------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPKC 221 (249)
Q Consensus 165 ~~~~---------pG-d~Vlv~~P~y~~~~~~~~~~G~-------------~v~~v~~~~~~~id~e~l~~~i~~~~~k~ 221 (249)
.+.. +| ++|++..-+|......+...+. .+..++ ..|++++++.+. +++++
T Consensus 117 ~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~i~-~~~~a 190 (401)
T PRK00854 117 AVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-----FGDAEALEAAIT-PNTVA 190 (401)
T ss_pred HHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-----CCCHHHHHHHhC-CCeEE
Confidence 7742 24 6888888777643322222221 122222 147899999997 68999
Q ss_pred EEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 222 IFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 222 i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
|++++|+||+|.++++. +.+..+|++||
T Consensus 191 ii~e~~~~~~G~~~~~~~~l~~l~~l~~~~g 221 (401)
T PRK00854 191 FLVEPIQGEAGVIIPPAGYFTRVRELCTANN 221 (401)
T ss_pred EEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 99999999999998754 55788899886
No 246
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.79 E-value=7e-08 Score=83.62 Aligned_cols=150 Identities=21% Similarity=0.219 Sum_probs=110.7
Q ss_pred eeeccCCCCCCCCCHHHHHHHHhcc-CCCCCC-CcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCeE
Q 025730 97 IVKIDANENPYGPPPEVREALGQLK-FPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDKI 173 (249)
Q Consensus 97 ~I~L~~~~~~~~~p~~v~~al~~~~-~~~~Yp-~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~-pGd~V 173 (249)
.+||-+-. -.-|..++.++|.+.. ....|. |+...+|.+..|+.+| .+.-++..++|.+..+.++..|. +|.+|
T Consensus 23 ~vDLRSDT-vT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~G--KEAgLFv~SGTmgNllaIm~Hc~~rg~ei 99 (384)
T KOG1368|consen 23 SVDLRSDT-VTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFG--KEAGLFVPSGTMGNLLAIMVHCHQRGSEI 99 (384)
T ss_pred cccccccc-ccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhC--ccceeeecccccccHHHHHHHhcCCCceE
Confidence 46665433 2335578888888733 235674 5678899999999999 55444444555566666666654 99999
Q ss_pred EEcCCCCh-hHHH--HHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-------CCceEEEEcCCCCccc-cCCChHH--H
Q 025730 174 VDCPPTFT-MYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLTSPNNPDG-RFSWTSS--W 240 (249)
Q Consensus 174 lv~~P~y~-~~~~--~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-------~~~k~i~l~~PnNPTG-~~~~~~e--~ 240 (249)
++.+-.+. .|+. +....|+.+..+...+++.+|+++|++++.. +.+++|+|.|-+|-+| .+++.++ .
T Consensus 100 i~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~ 179 (384)
T KOG1368|consen 100 IVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDR 179 (384)
T ss_pred EeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHH
Confidence 99998885 3443 4556889999998778889999999999863 2479999999988787 8888774 4
Q ss_pred HHHHhhhhC
Q 025730 241 IWGISSEHN 249 (249)
Q Consensus 241 i~~i~~~~~ 249 (249)
+..+|++||
T Consensus 180 v~~lak~~g 188 (384)
T KOG1368|consen 180 VKALAKRHG 188 (384)
T ss_pred HHHHHhccC
Confidence 788999875
No 247
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.76 E-value=1.7e-07 Score=86.59 Aligned_cols=155 Identities=16% Similarity=0.167 Sum_probs=104.1
Q ss_pred CCCCeeeccCCCCCC---CCCHHHHHHHHh-ccCCCCC--CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 93 KPEDIVKIDANENPY---GPPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~---~~p~~v~~al~~-~~~~~~Y--p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
.+...+|+..+.... -.++.+.+++.+ +.....| +..+..+|+++|++++.. .++|++++|++++++.+++..
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~~~~sGseA~e~Alk~a 124 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVRLA 124 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCc-ccEEEEeCCHHHHHHHHHHHH
Confidence 456788998775432 356888888875 4333334 555688999999998864 368999999999999988753
Q ss_pred c--CCCCeEEEcCCCChhHHHHHHH---CCCEEEEecCC----C-----CC---CCCHHHHHHhhcc--CCceEEEEc-C
Q 025730 167 L--DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRK----S-----DF---SLNVELIADAVER--EKPKCIFLT-S 226 (249)
Q Consensus 167 ~--~pGd~Vlv~~P~y~~~~~~~~~---~G~~v~~v~~~----~-----~~---~id~e~l~~~i~~--~~~k~i~l~-~ 226 (249)
. ...++|+...++|..+...+.. .|......+.. . .. ..|++++++.+++ .++++|++. .
T Consensus 125 r~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~ 204 (423)
T TIGR00713 125 RGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPV 204 (423)
T ss_pred HHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCC
Confidence 2 2458999999999876433222 11111111100 0 00 0278999998863 357888875 8
Q ss_pred CCCccccCCChH---HHHHHHhhhhC
Q 025730 227 PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
|+| +|.+.++. +.+.++|++||
T Consensus 205 ~~~-~G~~~~~~~~l~~l~~l~~~~~ 229 (423)
T TIGR00713 205 AGN-MGVVPPKPEFLAGLRALTEEYG 229 (423)
T ss_pred CCC-CCCcCCCHHHHHHHHHHHHHhC
Confidence 899 79887753 55888999886
No 248
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.76 E-value=1.2e-07 Score=88.47 Aligned_cols=150 Identities=14% Similarity=0.067 Sum_probs=104.9
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-ccCCC--CCCCc----C------hHH-HHHHHHHHcCCCCCCEEEe---CCHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPY--IYPDP----E------SRR-LRAALAKDSGLESDHILVG---CGADE 157 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~~~~~--~Yp~~----g------~~~-lr~~la~~~~~~~~~I~vt---~Ga~~ 157 (249)
.+.|+|-..||.. ++.+++++.. +...+ .||.. | .++ .|+.++++++.+++++.++ .|+++
T Consensus 34 ~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~ 111 (452)
T PTZ00094 34 IEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSP 111 (452)
T ss_pred HcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHH
Confidence 4568999999974 5788888876 32212 33321 1 222 5678899999988887666 78899
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCChhHHHHHHH----------CCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCC
Q 025730 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----------NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (249)
Q Consensus 158 ~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~----------~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~P 227 (249)
+...++.+++++||+|++....|......... .+.++..++.+.++.+|++++++.+++.++++|++.+
T Consensus 112 an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~- 190 (452)
T PTZ00094 112 ANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGA- 190 (452)
T ss_pred HHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeC-
Confidence 99999999999999999987777643322210 1133445555556889999999999655778877643
Q ss_pred CCccccCCChHHHHHHHhhhhC
Q 025730 228 NNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 228 nNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.+|.. .+.+.+.++|+++|
T Consensus 191 -s~~g~~-~di~~I~~i~~~~g 210 (452)
T PTZ00094 191 -SAYPRD-IDYKRFREICDSVG 210 (452)
T ss_pred -CCCCCc-cCHHHHHHHHHHcC
Confidence 348987 46667778898875
No 249
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.74 E-value=8e-08 Score=86.93 Aligned_cols=130 Identities=16% Similarity=0.081 Sum_probs=88.8
Q ss_pred CCCCCCHHHHHHHHh-ccC----C-CCCC-C-------cChHHHHHHHHHHcCC-CCCCEEEeCC-HHHHHHHHHHHhcC
Q 025730 105 NPYGPPPEVREALGQ-LKF----P-YIYP-D-------PESRRLRAALAKDSGL-ESDHILVGCG-ADELIDLIMRCVLD 168 (249)
Q Consensus 105 ~~~~~p~~v~~al~~-~~~----~-~~Yp-~-------~g~~~lr~~la~~~~~-~~~~I~vt~G-a~~~l~~~~~~~~~ 168 (249)
-|...|+.|++++.. +.. + ..|. . .-..+.|+.++++++. ++++|++|.| +|++++.++..++.
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~ 85 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG 85 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC
Confidence 355678899999876 311 1 1111 1 1256889999999997 5678999988 99999999999987
Q ss_pred ---CCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCC-C-HHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 169 ---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-N-VELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 169 ---pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~i-d-~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
+||.|++ .+....+...++..|.++..++.++++.. + ++..+..++ +++|+|.+++-.|.||..++
T Consensus 86 ~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h~~t~tG~~~~ 156 (355)
T cd00611 86 DKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCSNETIHGVEFD 156 (355)
T ss_pred CCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeCCcccccEEcc
Confidence 4555544 22222334477888999988886443222 3 233333444 78999999999999999853
No 250
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.74 E-value=3.4e-07 Score=84.86 Aligned_cols=122 Identities=13% Similarity=0.204 Sum_probs=92.3
Q ss_pred CCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh-hHHHHHHHCCCEEEEec---
Q 025730 124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVP--- 198 (249)
Q Consensus 124 ~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~-~~~~~~~~~G~~v~~v~--- 198 (249)
..| .++...+|.+.+++++|. ++++.++.++.++.+++...++|||.| +..+|. .........|+..+.+.
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~--e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~ 147 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGF--KHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDE 147 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCC--CeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeeccc
Confidence 457 466789999999999995 479999999999999877778999975 444443 44444677888766553
Q ss_pred -------CCCCCCCCHHHHHHhhccC---CceEEEEcCCCCcc-ccCCCh--HHHHHHHhhhhC
Q 025730 199 -------RKSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GRFSWT--SSWIWGISSEHN 249 (249)
Q Consensus 199 -------~~~~~~id~e~l~~~i~~~---~~k~i~l~~PnNPT-G~~~~~--~e~i~~i~~~~~ 249 (249)
...++.+|++++++++++. ++++|.+.+++|-. |..++. .+.+.++|++||
T Consensus 148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~G 211 (460)
T PRK13237 148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHG 211 (460)
T ss_pred ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcC
Confidence 1246789999999999742 34567788899998 577554 467899999986
No 251
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.74 E-value=2e-07 Score=83.09 Aligned_cols=118 Identities=21% Similarity=0.246 Sum_probs=97.3
Q ss_pred CCCC---CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh----hHHHHHHHCCCEEE
Q 025730 123 PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVV 195 (249)
Q Consensus 123 ~~~Y---p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~----~~~~~~~~~G~~v~ 195 (249)
++-| .++....|.+.++.+-|= -.-+.+.+++.++..++..++++||.|+-..--|. .+....+..|.++.
T Consensus 53 G~iYsRi~NPT~~vlE~RiAaLEGG--~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~ 130 (426)
T COG2873 53 GNIYTRIMNPTTDVLEERIAALEGG--VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVR 130 (426)
T ss_pred CceeeeccCchHHHHHHHHHHhhcc--hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEE
Confidence 4555 457788999999998851 12355677789999999999999999998888775 34455577999999
Q ss_pred EecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 196 KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 196 ~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+|+. .|++.++++++ ++||+||+..-.||-+.+ .+-+.+..||++|+
T Consensus 131 fvd~-----~d~~~~~~aI~-~nTkavf~EtigNP~~~v-~Die~ia~iAh~~g 177 (426)
T COG2873 131 FVDP-----DDPENFEAAID-ENTKAVFAETIGNPGLDV-LDIEAIAEIAHRHG 177 (426)
T ss_pred EeCC-----CCHHHHHHHhC-cccceEEEEeccCCCccc-cCHHHHHHHHHHcC
Confidence 9974 36899999998 899999999999999999 58888999999985
No 252
>PRK07505 hypothetical protein; Provisional
Probab=98.70 E-value=5e-07 Score=82.98 Aligned_cols=147 Identities=10% Similarity=0.040 Sum_probs=93.2
Q ss_pred CCCCeeeccCCCCC-CCCCHHHHHHHHh-cc-CC--CC------CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDANENP-YGPPPEVREALGQ-LK-FP--YI------YPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~~~~-~~~p~~v~~al~~-~~-~~--~~------Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~ 161 (249)
.+...+|+..+... +...+++.+++.+ +. .+ .. +......+|++.|+++++. +.++.++| +++...
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~sG-~~a~~~ 120 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFTSC-SAAHLG 120 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEECCh-HHHHHH
Confidence 34567898765322 1456888888765 32 11 11 1122357899999999986 45555555 556666
Q ss_pred HHHHhc----CCCC-eEEEcCCCCh-hHH--HHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 162 IMRCVL----DPGD-KIVDCPPTFT-MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 162 ~~~~~~----~pGd-~Vlv~~P~y~-~~~--~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
++..+. .+|+ .|++.+..|. .+. ......+.+++.+|. .|+++++++++ .++++++|++|+||||.
T Consensus 121 ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~-~~~~~~vl~~p~~~~G~ 194 (402)
T PRK07505 121 ILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICK-TNKTVAYVADGVYSMGG 194 (402)
T ss_pred HHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHh-cCCCEEEEEecccccCC
Confidence 654322 2232 3666665553 221 111224567777765 37899999887 56789999999999999
Q ss_pred CCChHHHHHHHhhhhC
Q 025730 234 FSWTSSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~i~~i~~~~~ 249 (249)
+++ .+.+.++|+++|
T Consensus 195 ~~~-~~~i~~l~~~~~ 209 (402)
T PRK07505 195 IAP-VKELLRLQEKYG 209 (402)
T ss_pred cCC-HHHHHHHHHHcC
Confidence 965 566778898875
No 253
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=98.69 E-value=1e-06 Score=80.10 Aligned_cols=111 Identities=13% Similarity=0.047 Sum_probs=77.3
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHH
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELI 210 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l 210 (249)
..++++.+|++++.+ +.+++++|.. ++..+...+.++||.|++..-.|......+.......+.++ ..|++++
T Consensus 58 ~~~~e~~la~~~~~~-~~l~~~sG~~-a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l 130 (370)
T PRK05937 58 LDDLEHKIAHFHGAP-EAFIVPSGYM-ANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHL 130 (370)
T ss_pred HHHHHHHHHHHhCCC-eEEEECChHH-HHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHH
Confidence 578999999999974 3477777764 44455555567788888777777655555554433333332 3588999
Q ss_pred HHhhcc-----CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 211 ADAVER-----EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 211 ~~~i~~-----~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++.++. +++++|++++++|++|.+. +.+.+.++|+++|
T Consensus 131 ~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~-pl~eI~~l~~~~~ 173 (370)
T PRK05937 131 ESLLESCRQRSFGRIFIFVCSVYSFKGTLA-PLEQIIALSKKYH 173 (370)
T ss_pred HHHHHhhhccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcC
Confidence 998863 2356777899999999995 5667777888875
No 254
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.67 E-value=4.5e-08 Score=89.91 Aligned_cols=120 Identities=20% Similarity=0.244 Sum_probs=91.4
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CC---
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SD--- 202 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~--- 202 (249)
|..-..+..+.+|+.||.+ ...+++||++.++..+++++++|||+|+++..+|......+.+.|+++++++.. +.
T Consensus 64 p~G~I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi 142 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI 142 (417)
T ss_dssp TBTHHHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred CccHHHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence 4334788999999999964 357789999999999999999999999999999988777888899999999832 22
Q ss_pred -CCCCH-----HHHHHhhcc-CCceE---EEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 -FSLNV-----ELIADAVER-EKPKC---IFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 -~~id~-----e~l~~~i~~-~~~k~---i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..+++ +.+++++++ +..|. |+|++|+. .|.++ +.+.+.++|+++|
T Consensus 143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~-di~~I~~~~h~~~ 197 (417)
T PF01276_consen 143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCY-DIKEIAEICHKHG 197 (417)
T ss_dssp BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE--HHHHHHHHCCTE
T ss_pred ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEE-CHHHHHHHhcccC
Confidence 23466 999999874 33444 99999986 79995 6666667777653
No 255
>PLN02263 serine decarboxylase
Probab=98.65 E-value=6.4e-07 Score=83.55 Aligned_cols=116 Identities=11% Similarity=-0.063 Sum_probs=93.2
Q ss_pred HHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhc--CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHH
Q 025730 133 RLRAALAKDSGLESD--HILVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208 (249)
Q Consensus 133 ~lr~~la~~~~~~~~--~I~vt~Ga~~~l~~~~~~~~--~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e 208 (249)
++.+.+++++|++++ .=++|+|++++...++.+.- .+...+++++-+|......+...|.+++.||.++++.+|++
T Consensus 137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~ 216 (470)
T PLN02263 137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCA 216 (470)
T ss_pred HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHH
Confidence 455556666788653 46789999999988776542 23457889999999999999999999999999888999999
Q ss_pred HHHHhhccCC--ceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 209 LIADAVEREK--PKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 209 ~l~~~i~~~~--~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+|++++.+.. +-+|+.+-.+.++|.+ ++.+.+..+|+++|
T Consensus 217 aL~~aI~~d~~~P~iVvataGTT~~GAi-Dpi~eIa~i~~~~g 258 (470)
T PLN02263 217 DFKAKLLANKDKPAIINVNIGTTVKGAV-DDLDLVIKTLEECG 258 (470)
T ss_pred HHHHHHHhCCCCcEEEEEEecCCCCcCC-CCHHHHHHHHHHcC
Confidence 9999997432 4455566788999999 89999999999875
No 256
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=98.62 E-value=4.6e-07 Score=83.80 Aligned_cols=148 Identities=20% Similarity=0.196 Sum_probs=100.2
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHhc--c-CCCCCC-------CcChHHHHH----HHHHHcCCCCCCE-EEeCCHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQL--K-FPYIYP-------DPESRRLRA----ALAKDSGLESDHI-LVGCGADELI 159 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~~--~-~~~~Yp-------~~g~~~lr~----~la~~~~~~~~~I-~vt~Ga~~~l 159 (249)
.+.++|-..+|.. +|.+++++... . ++.+|+ ++...+|.+ .+++++|.+ .. +.+++++.++
T Consensus 28 ~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~--~alv~~~SG~~A~ 103 (416)
T PRK13034 28 QDHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD--YANVQPHSGSQAN 103 (416)
T ss_pred hcCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC--ceEEecCCcHHHH
Confidence 4568888888875 68888888752 1 111111 123567777 999999954 45 4467889999
Q ss_pred HHHHHHhcCCCCeEEEcCCCChh-HHHHHHH--CCCEE--EEecC-CCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 160 DLIMRCVLDPGDKIVDCPPTFTM-YEFDAAV--NGAAV--VKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~P~y~~-~~~~~~~--~G~~v--~~v~~-~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
..++.++++|||+|++....|.. +..-++. .+... +.++. ...+.+|++++++.++..++|+|+++++. +|.
T Consensus 104 ~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~ 181 (416)
T PRK13034 104 GAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPR 181 (416)
T ss_pred HHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--ccc
Confidence 99999999999999999998864 2211111 12211 23332 23466899999998864578999877665 455
Q ss_pred CCChHHHHHHHhhhhC
Q 025730 234 FSWTSSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~i~~i~~~~~ 249 (249)
. .+.+.+.++|++||
T Consensus 182 ~-~dl~~l~~la~~~g 196 (416)
T PRK13034 182 E-LDFARFREIADEVG 196 (416)
T ss_pred c-cCHHHHHHHHHHcC
Confidence 5 46677888899875
No 257
>PRK15029 arginine decarboxylase; Provisional
Probab=98.58 E-value=8e-07 Score=87.23 Aligned_cols=120 Identities=14% Similarity=0.058 Sum_probs=96.4
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CC---
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SD--- 202 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~--- 202 (249)
|+.-..+..+.+|+.||.+ .-.+++||+|.++..++++++++||+|++...+|-.....+.+.|++++++... ..
T Consensus 203 p~G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred CCcHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 4444788999999999964 457788999999999999999999999999999988778888999999999722 22
Q ss_pred -CCCC-----HHHHHHhhcc-CCce--------EEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 -FSLN-----VELIADAVER-EKPK--------CIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 -~~id-----~e~l~~~i~~-~~~k--------~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..++ ++.+++++++ +.+| +++|++|+. .|.++ +.+.+.++|++++
T Consensus 282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~-di~~I~~~~h~~~ 341 (755)
T PRK15029 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCY-NAKEAQDLLEKTS 341 (755)
T ss_pred ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceee-CHHHHHHHHHhcC
Confidence 2344 8999998853 2344 899999986 79995 5666677777764
No 258
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.57 E-value=9.6e-07 Score=88.16 Aligned_cols=117 Identities=16% Similarity=0.169 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHH---HHHHhc-----CCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCC
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADELIDL---IMRCVL-----DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~---~~~~~~-----~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~ 202 (249)
..++.+.+++..|.+.-.+..+.| .++-.. +++... ...++|+++.-.|......++..|.+++.|+.+++
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aG-A~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~ 610 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSG-AQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD 610 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchH-HHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC
Confidence 357888888888987433333333 433332 233211 12367999999997666678889999999998888
Q ss_pred CCCCHHHHHHhhcc--CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 FSLNVELIADAVER--EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 ~~id~e~l~~~i~~--~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.+|+++|++++++ .++++|++++|+| +|.+-++.+.+.++|+++|
T Consensus 611 G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G 658 (939)
T TIGR00461 611 GNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFG 658 (939)
T ss_pred CCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcC
Confidence 99999999999974 4789999999999 8998655788889998874
No 259
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.54 E-value=7.7e-07 Score=81.25 Aligned_cols=130 Identities=11% Similarity=0.011 Sum_probs=90.3
Q ss_pred CCCCCHH-HHHHHHh-cc-CCCCCCC--cChHHHHHHHHHHcCCC-CCCEEEeC-CHHHHHHHHHHHhcCC-CCeEEEcC
Q 025730 106 PYGPPPE-VREALGQ-LK-FPYIYPD--PESRRLRAALAKDSGLE-SDHILVGC-GADELIDLIMRCVLDP-GDKIVDCP 177 (249)
Q Consensus 106 ~~~~p~~-v~~al~~-~~-~~~~Yp~--~g~~~lr~~la~~~~~~-~~~I~vt~-Ga~~~l~~~~~~~~~p-Gd~Vlv~~ 177 (249)
|..+++. +++++.. .. ..++-+. .-..+.|+.++++++.+ +++|+++. ++|++++.++..++++ ++.|++ +
T Consensus 20 p~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~ 98 (378)
T PRK03080 20 PCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-W 98 (378)
T ss_pred CcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-e
Confidence 4445566 8898875 22 1133232 23678999999999984 45788875 8999999999999875 445554 4
Q ss_pred CCCh-hHHH-HHHHCCC-EEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHH
Q 025730 178 PTFT-MYEF-DAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 178 P~y~-~~~~-~~~~~G~-~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~ 242 (249)
-.|+ .+.. ..+..|. ++..++.+.+..+|+++++ .++.|.+++.+|.||..++.+++.+
T Consensus 99 g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~------~~~~V~~~h~~t~tG~~~pi~~I~~ 160 (378)
T PRK03080 99 ESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVD------FDRDVVFTWNGTTTGVRVPVARWIG 160 (378)
T ss_pred CHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcC------CCCCEEEEecCCccceeccchhhcc
Confidence 4565 3443 2356788 8888887666678877642 2567899999999999976555433
No 260
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=98.53 E-value=1.9e-06 Score=78.82 Aligned_cols=155 Identities=11% Similarity=0.072 Sum_probs=99.5
Q ss_pred CCCCeeeccCCCCCCC---CCHHHHHHHHh-ccC---CCC-CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANENPYG---PPPEVREALGQ-LKF---PYI-YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~---~p~~v~~al~~-~~~---~~~-Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+.-... .+|.+.+++.+ +.. ..+ +......++++.++++++. +.++++++++++.+.+++
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e~al~ 106 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGETALK 106 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHHH
Confidence 3456788877643332 46788888765 321 111 1122356688888887764 578899999999999998
Q ss_pred Hhc----------CCCCeEEEcCCCChhHHHHH-HHCCCEEE---EecCCCC----CCCCHHHHHHhhccCCceEEEEcC
Q 025730 165 CVL----------DPGDKIVDCPPTFTMYEFDA-AVNGAAVV---KVPRKSD----FSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 165 ~~~----------~pGd~Vlv~~P~y~~~~~~~-~~~G~~v~---~v~~~~~----~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
... ..+++|++.+-.|....... ...+.... ..+...+ ...|++++++.++..++++|++..
T Consensus 107 ~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep 186 (400)
T PTZ00125 107 FARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP 186 (400)
T ss_pred HHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence 653 13478888888876433322 22221111 0111000 113899999999645799999988
Q ss_pred CCCccccCCChH---HHHHHHhhhhC
Q 025730 227 PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++||||.++++. +.+.++|++||
T Consensus 187 ~~~~~G~~~~~~~~l~~l~~l~~~~~ 212 (400)
T PTZ00125 187 IQGEAGVIVPDDGYLKQVYELCKKYN 212 (400)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 899999998753 55788899886
No 261
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.52 E-value=3e-06 Score=77.71 Aligned_cols=149 Identities=14% Similarity=0.194 Sum_probs=97.9
Q ss_pred CCCCeeeccCCCC--CCC-CCHHHHHHHHh-ccC---CCC-CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF---PYI-YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~~--~~~-~p~~v~~al~~-~~~---~~~-Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+-- .++ ..|.+.+++.+ +.. ..+ +..+...+|.+.|+++.+ .+.++++++++++++.++.
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGseA~e~Alk 115 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTG--KDMVLPMNTGAEAVETAIK 115 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCC--CCeEEEcCChHHHHHHHHH
Confidence 4566788866532 232 45777877765 332 111 223335678888888776 4689999999999999888
Q ss_pred HhcC---------CC-CeEEEcCCCChhHH-HHHHHCCCE------------EEEecCCCCCCCCHHHHHHhhccCCceE
Q 025730 165 CVLD---------PG-DKIVDCPPTFTMYE-FDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKC 221 (249)
Q Consensus 165 ~~~~---------pG-d~Vlv~~P~y~~~~-~~~~~~G~~------------v~~v~~~~~~~id~e~l~~~i~~~~~k~ 221 (249)
.... +| ++|+..+-+|.... ......+.. +..++. .|++++++.++ .++++
T Consensus 116 ~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~-~~~~~ 189 (396)
T PRK04073 116 AARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-----GDLEALKAAIT-PNTAA 189 (396)
T ss_pred HHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-----CCHHHHHHhcc-cCeEE
Confidence 6521 34 67888877775332 222222211 112221 27899999987 67899
Q ss_pred EEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 222 IFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 222 i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
|+++.++||||.++++. +.+.++|++||
T Consensus 190 viiep~~~~~G~~~~~~~~l~~l~~l~~~~g 220 (396)
T PRK04073 190 FLVEPIQGEAGINIPPEGFLKAARELCKEEN 220 (396)
T ss_pred EEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 98888899999998764 56788898875
No 262
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.48 E-value=1.7e-06 Score=84.31 Aligned_cols=121 Identities=12% Similarity=0.145 Sum_probs=93.9
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHH-HHHCCCEEEEecCC-CCC-
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDF- 203 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~-~~~~G~~v~~v~~~-~~~- 203 (249)
|+.-..+..+.+|+.||.+ .-.+++||++.++..++++++.+||+|++...+|-..... ..+.|++++++... +.+
T Consensus 172 ~eG~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~G 250 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFG 250 (720)
T ss_pred CChHHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccC
Confidence 4334788999999999965 3567889999999999999999999999999999876663 67899999999732 222
Q ss_pred ---CCCHHH-----HHHhhccC--------C-ceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 204 ---SLNVEL-----IADAVERE--------K-PKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 204 ---~id~e~-----l~~~i~~~--------~-~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+++.+. |++++++. + .|+++|++|+. .|.+++..+++..++++++
T Consensus 251 i~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~ 312 (720)
T PRK13578 251 FIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD 312 (720)
T ss_pred CcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC
Confidence 346544 88888643 1 58999999986 8999766666666676643
No 263
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.44 E-value=4e-06 Score=74.16 Aligned_cols=162 Identities=17% Similarity=0.189 Sum_probs=108.2
Q ss_pred HHHHhCCC-CCCeeeccCCCCC--CC---CCHHHHHHHHhc---cCCCCC-CCcChHHHHHHHHHHc-C-----CCCCCE
Q 025730 86 LSIQLGRK-PEDIVKIDANENP--YG---PPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G-----LESDHI 149 (249)
Q Consensus 86 ~~~~~g~~-~~~~I~L~~~~~~--~~---~p~~v~~al~~~---~~~~~Y-p~~g~~~lr~~la~~~-~-----~~~~~I 149 (249)
+...+.++ .+..|+|++|... .+ .-+.|.+|-+.+ ...-.| |-.|..++.+..+++. | +..+.|
T Consensus 42 VTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri 121 (427)
T KOG1411|consen 42 VTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRI 121 (427)
T ss_pred HHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhhhccce
Confidence 34444433 3456888888432 11 235666665542 222467 8889999999999985 4 233344
Q ss_pred E--EeCCHHHHHHHHHHHh--cCCCCeEEEcCCCChhHHHHHHHCCCEEEEec--CCCCCCCCHHHHHHhhccCCceEEE
Q 025730 150 L--VGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIF 223 (249)
Q Consensus 150 ~--vt~Ga~~~l~~~~~~~--~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~--~~~~~~id~e~l~~~i~~~~~k~i~ 223 (249)
+ -|-++|.+|.+...-+ .-++..|.+++|+|.....++..+|..+..+. .....++|++.+.+-+.+.....++
T Consensus 122 ~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~i 201 (427)
T KOG1411|consen 122 VTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSII 201 (427)
T ss_pred eEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEE
Confidence 3 2445566666554432 45789999999999999999999999987776 3456789999988888754455666
Q ss_pred EcC--CCCccccCCChHHH--HHHHhhh
Q 025730 224 LTS--PNNPDGRFSWTSSW--IWGISSE 247 (249)
Q Consensus 224 l~~--PnNPTG~~~~~~e~--i~~i~~~ 247 (249)
|++ .|||||+--+.++| +..+.++
T Consensus 202 lLhaCaHNPTGvDPt~eqw~ki~~~~~~ 229 (427)
T KOG1411|consen 202 LLHACAHNPTGVDPTKEQWEKISDLIKE 229 (427)
T ss_pred EeehhhcCCCCCCccHHHHHHHHHHhhh
Confidence 776 49999999566655 4444443
No 264
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.38 E-value=1e-05 Score=73.61 Aligned_cols=156 Identities=13% Similarity=0.154 Sum_probs=101.7
Q ss_pred CCCCeeeccCC--CCCCCCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCCCCC-CEEEeCCHHHHHHHHHHHh--
Q 025730 93 KPEDIVKIDAN--ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCV-- 166 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~~~~-~I~vt~Ga~~~l~~~~~~~-- 166 (249)
.+...||+..+ ...++..|.+.+++.+ +.....++.....++++.+++.+.-.++ .++++++++++...+++..
T Consensus 27 dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~ 106 (375)
T PRK04260 27 DGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARK 106 (375)
T ss_pred CCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHH
Confidence 34567899776 3446667889988876 4332344444456788899987643344 3578999999999887764
Q ss_pred cCCCCeEEEcCCCChhHH-HHHHHCCCEEEE------ecCCCC-CCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 167 LDPGDKIVDCPPTFTMYE-FDAAVNGAAVVK------VPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 167 ~~pGd~Vlv~~P~y~~~~-~~~~~~G~~v~~------v~~~~~-~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
...+++|++.+..|.... ......|.+... ++.... ...|++.+++.++ .++.+|++..++|++|.+..+.
T Consensus 107 ~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~-~~~a~vi~e~v~~~~G~~~~~~ 185 (375)
T PRK04260 107 ATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN-KNTAAVMLELVQGESGVLPADK 185 (375)
T ss_pred hcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC-CCeEEEEECCeECCCCCcCCCH
Confidence 235678999888887432 222222221110 000000 0238999999886 5788999999999999886543
Q ss_pred ---HHHHHHhhhhC
Q 025730 239 ---SWIWGISSEHN 249 (249)
Q Consensus 239 ---e~i~~i~~~~~ 249 (249)
+.+..+|+++|
T Consensus 186 ~~l~~~~~l~~~~~ 199 (375)
T PRK04260 186 DFVKALADYCQETG 199 (375)
T ss_pred HHHHHHHHHHHHcC
Confidence 55778888875
No 265
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.36 E-value=1.2e-05 Score=73.05 Aligned_cols=156 Identities=12% Similarity=0.150 Sum_probs=97.5
Q ss_pred CCCCeeeccCCCC--CC-CCCHHHHHHHHh-ccCCCCCCCcChHHHHHHHHHHcCC--CCCCEEEeCCHHHHHHHHHHHh
Q 025730 93 KPEDIVKIDANEN--PY-GPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 93 ~~~~~I~L~~~~~--~~-~~p~~v~~al~~-~~~~~~Yp~~g~~~lr~~la~~~~~--~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
.+...+|+..|.. .+ -.++.+.+++.+ ++...........++++.+++++.- ..+.+++++++++++..+++..
T Consensus 27 ~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a 106 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLA 106 (377)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHH
Confidence 3556889988752 22 356788888765 4322112222345677777777641 2357999999999999999853
Q ss_pred -cCCC-CeEEEcCCCChhHHHH-HHHCCCEEE---EecCCCC--C--CCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 167 -LDPG-DKIVDCPPTFTMYEFD-AAVNGAAVV---KVPRKSD--F--SLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 167 -~~pG-d~Vlv~~P~y~~~~~~-~~~~G~~v~---~v~~~~~--~--~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
..+| ++|++.++.|...... ....|.... ..+...+ + .-|++.+++.++ +++++|++..+++++|....
T Consensus 107 ~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~ii~e~i~~~~G~~~~ 185 (377)
T PRK02936 107 RKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN-EEVAAVMLEVVQGEGGVIPA 185 (377)
T ss_pred HHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc-CCeEEEEEecccCCCCCccC
Confidence 2244 6799999988733221 122222111 1111111 0 117899999997 67899999888999987743
Q ss_pred h-H--HHHHHHhhhhC
Q 025730 237 T-S--SWIWGISSEHN 249 (249)
Q Consensus 237 ~-~--e~i~~i~~~~~ 249 (249)
+ + +.+..+|++||
T Consensus 186 ~~~~l~~l~~l~~~~~ 201 (377)
T PRK02936 186 DPAFLQEVQTLCKKFG 201 (377)
T ss_pred CHHHHHHHHHHHHHcC
Confidence 3 2 55788999886
No 266
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.35 E-value=3.2e-05 Score=78.20 Aligned_cols=150 Identities=17% Similarity=0.170 Sum_probs=100.4
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHhc-cC--CCCC-CC---cC----hHHHHHHHHHHcCCCCCCEEEeC-CHHHHHHH-
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQL-KF--PYIY-PD---PE----SRRLRAALAKDSGLESDHILVGC-GADELIDL- 161 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~~-~~--~~~Y-p~---~g----~~~lr~~la~~~~~~~~~I~vt~-Ga~~~l~~- 161 (249)
..+|.|+.-.+.+. +.+...+... .. .+-| |. .| ..++.+.+++.+|.+ ++.+.. |++++...
T Consensus 499 ~~~i~lGsct~~~~--p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~ag 574 (954)
T PRK05367 499 RSMIPLGSCTMKLN--AAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAG 574 (954)
T ss_pred cceeeCCcCCCcCC--HHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHH
Confidence 34678888555543 3444443332 22 2334 31 12 356777888888965 455544 55444433
Q ss_pred --HHHHh-cCCCC----eEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccC--CceEEEEcCCCCccc
Q 025730 162 --IMRCV-LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDG 232 (249)
Q Consensus 162 --~~~~~-~~pGd----~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~--~~k~i~l~~PnNPTG 232 (249)
+++.+ .++|| +|++++..|......+...|.+++.++.+.++.+|+++|++++++. ++.+|++++|++- |
T Consensus 575 L~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~-G 653 (954)
T PRK05367 575 LLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTH-G 653 (954)
T ss_pred HHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCC-e
Confidence 23322 35665 5999999997777778889999999998778899999999999742 5778888999875 5
Q ss_pred cCCChHHHHHHHhhhhC
Q 025730 233 RFSWTSSWIWGISSEHN 249 (249)
Q Consensus 233 ~~~~~~e~i~~i~~~~~ 249 (249)
.+..+.+.+..+|+++|
T Consensus 654 ~~e~~I~eI~~i~h~~G 670 (954)
T PRK05367 654 VFEETIREICEIVHEHG 670 (954)
T ss_pred eecCCHHHHHHHHHHcC
Confidence 54356788888888875
No 267
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.34 E-value=7.1e-06 Score=80.02 Aligned_cols=119 Identities=10% Similarity=0.088 Sum_probs=91.8
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CCC--
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~~-- 203 (249)
|+.-..+..+.+|+.||.+ .-.+++||++.++..++++++.+||+|++...+|-.......+.|++++++... +.+
T Consensus 193 ~~G~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi 271 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI 271 (714)
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 3334678999999999965 356788999999999999999999999999999987777788899999999732 222
Q ss_pred --CCC-----HHHHHHhhccC-Cce---EEEEcCCCCccccCCChHHHHHHHhhhh
Q 025730 204 --SLN-----VELIADAVERE-KPK---CIFLTSPNNPDGRFSWTSSWIWGISSEH 248 (249)
Q Consensus 204 --~id-----~e~l~~~i~~~-~~k---~i~l~~PnNPTG~~~~~~e~i~~i~~~~ 248 (249)
+++ .+.+++++++. +.+ .++|++|+. .|.+++. +.+.++++.+
T Consensus 272 ~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~-~~I~~~~~~~ 325 (714)
T PRK15400 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNT-DFIKKTLDVK 325 (714)
T ss_pred ccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecCH-HHHHHHhCCC
Confidence 345 89999998642 334 788999964 8999654 4555555543
No 268
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.33 E-value=8.5e-06 Score=76.88 Aligned_cols=117 Identities=18% Similarity=0.202 Sum_probs=94.6
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC--CC---
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KS--- 201 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~--~~--- 201 (249)
|..-..+..+..|+.+|.+. -.+++||++.++..++++++.+||+|++..++|........+.|+.++++.. +.
T Consensus 68 p~G~i~eAqe~aA~~fgAd~-tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~g 146 (557)
T COG1982 68 PEGPIKEAQELAARVFGADH-TYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYG 146 (557)
T ss_pred CCccHHHHHHHHHHHhCCCc-eEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccc
Confidence 44447899999999999643 4678899999999999999999999999999998777777789999999873 22
Q ss_pred -CCCCCHHHHHHhhcc-CCc-eEEEEcCCCCccccCCChHHHHHHHh
Q 025730 202 -DFSLNVELIADAVER-EKP-KCIFLTSPNNPDGRFSWTSSWIWGIS 245 (249)
Q Consensus 202 -~~~id~e~l~~~i~~-~~~-k~i~l~~PnNPTG~~~~~~e~i~~i~ 245 (249)
-++++.+.+.+++.+ ... |+++|+||+. .|.+++.++++..+.
T Consensus 147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~ 192 (557)
T COG1982 147 IIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLH 192 (557)
T ss_pred ccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHh
Confidence 257899999998753 345 8899888876 799987776665543
No 269
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.30 E-value=1.1e-05 Score=78.69 Aligned_cols=114 Identities=11% Similarity=0.053 Sum_probs=89.5
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC-CC---
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SD--- 202 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~~--- 202 (249)
|..-..+..+.+|+.||.+ .-.+++||++.++..++++++.+||+|++...+|-.......+.|++++++... +.
T Consensus 193 ~~G~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi 271 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGI 271 (713)
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCC
Confidence 3334678899999999965 356788999999999999999999999999999987777788899999999732 22
Q ss_pred -CCCCH-----HHHHHhhccC----CceEEEEcCCCCccccCCChHHHHH
Q 025730 203 -FSLNV-----ELIADAVERE----KPKCIFLTSPNNPDGRFSWTSSWIW 242 (249)
Q Consensus 203 -~~id~-----e~l~~~i~~~----~~k~i~l~~PnNPTG~~~~~~e~i~ 242 (249)
++++. +.+++++++. ++++++|++|+. .|.+++..++..
T Consensus 272 ~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~ 320 (713)
T PRK15399 272 LGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQ 320 (713)
T ss_pred cCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHH
Confidence 23455 8888888642 236899999964 899976555443
No 270
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.24 E-value=3e-05 Score=67.93 Aligned_cols=163 Identities=15% Similarity=0.182 Sum_probs=103.6
Q ss_pred HHHHHhCCC-CCCeeeccCCCCCCC-----CCHHHHHHHHhc----cCCCCC-CCcChHHHHHHHHHHc-C-----CCCC
Q 025730 85 VLSIQLGRK-PEDIVKIDANENPYG-----PPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LESD 147 (249)
Q Consensus 85 ~~~~~~g~~-~~~~I~L~~~~~~~~-----~p~~v~~al~~~----~~~~~Y-p~~g~~~lr~~la~~~-~-----~~~~ 147 (249)
.+...++.. .+..++|+.+.-... .-|.|.++-..+ ...+.| |-.|.+.++++.++.+ | +..+
T Consensus 19 ~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~ 98 (410)
T KOG1412|consen 19 KLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKED 98 (410)
T ss_pred hhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhc
Confidence 344445543 334577777632111 113444433322 223667 7789999999988875 4 2233
Q ss_pred CE--EEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCChhHHHHHHHCCC-EEEEec--CCCCCCCCHHHHHHhhccCCce
Q 025730 148 HI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGA-AVVKVP--RKSDFSLNVELIADAVEREKPK 220 (249)
Q Consensus 148 ~I--~vt~Ga~~~l~~~~~~~--~~pGd~Vlv~~P~y~~~~~~~~~~G~-~v~~v~--~~~~~~id~e~l~~~i~~~~~k 220 (249)
.+ +-+-+++.++.+...-+ .-+...|.+.+|+|.....+++..|. ++..++ ..+.-.+|++.+...++....+
T Consensus 99 Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~ 178 (410)
T KOG1412|consen 99 RVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEG 178 (410)
T ss_pred cccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCC
Confidence 32 23455566676665533 22457899999999999999999994 444455 3455679999999999865566
Q ss_pred EEEEcC-C-CCccccCCChHHH--HHHHhhh
Q 025730 221 CIFLTS-P-NNPDGRFSWTSSW--IWGISSE 247 (249)
Q Consensus 221 ~i~l~~-P-nNPTG~~~~~~e~--i~~i~~~ 247 (249)
.|++++ . |||||.--+.++| +..+.++
T Consensus 179 si~iLhaCAhNPTGmDPT~EQW~qia~vik~ 209 (410)
T KOG1412|consen 179 SIIILHACAHNPTGMDPTREQWKQIADVIKS 209 (410)
T ss_pred cEEeeeccccCCCCCCCCHHHHHHHHHHHHh
Confidence 666664 3 9999999888877 4444443
No 271
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.24 E-value=1e-05 Score=73.57 Aligned_cols=153 Identities=16% Similarity=0.161 Sum_probs=98.4
Q ss_pred CCeeeccCCCCCCCCCHHHHH-HHHhccCCCCC-CC---cChHHHHHHHHHHc----CCCCCCEEEeCCHHH---HHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVRE-ALGQLKFPYIY-PD---PESRRLRAALAKDS----GLESDHILVGCGADE---LIDLI 162 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~-al~~~~~~~~Y-p~---~g~~~lr~~la~~~----~~~~~~I~vt~Ga~~---~l~~~ 162 (249)
..+|+|++-..-+.+--+.+- .+......+-| |. .|+.++...|.+|+ |.+.=.+-.-.|+.. +|.++
T Consensus 66 ~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~I 145 (496)
T COG1003 66 RGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAI 145 (496)
T ss_pred cCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHH
Confidence 356788877766643221110 11112223445 43 25555555555554 544322333444432 33332
Q ss_pred HHHhcCCC----CeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 163 MRCVLDPG----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 163 ~~~~~~pG----d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
=...-..| +.+|+++-.+..-...+.+.|.+|+.|+.++++.+|+++|++++. +++.+++|+|||. .|..=...
T Consensus 146 r~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~-~~~AalMiTnPsT-~GvFE~~I 223 (496)
T COG1003 146 RAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAE-DNLAALMITNPST-LGVFEEDI 223 (496)
T ss_pred HHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhc-cceeEEEeccCcc-cccchhhH
Confidence 22223333 789999999998888899999999999999999999999999998 7899999999985 57663334
Q ss_pred HHHHHHhhhhC
Q 025730 239 SWIWGISSEHN 249 (249)
Q Consensus 239 e~i~~i~~~~~ 249 (249)
..+.+|.+++|
T Consensus 224 ~ei~~ivH~~G 234 (496)
T COG1003 224 REICEIVHEAG 234 (496)
T ss_pred HHHHHHHHHcC
Confidence 66777777764
No 272
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.24 E-value=5.9e-06 Score=74.74 Aligned_cols=102 Identities=12% Similarity=-0.035 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHcCCC-CCCEEEeCC-HHHHHHHHHHHhcCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEecCC----CC
Q 025730 131 SRRLRAALAKDSGLE-SDHILVGCG-ADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK----SD 202 (249)
Q Consensus 131 ~~~lr~~la~~~~~~-~~~I~vt~G-a~~~l~~~~~~~~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~----~~ 202 (249)
..++++.++++++.+ ..+|+++.| +|.+++.++..++.+||++++..-+.. .+...++..|. +..+..+ ..
T Consensus 39 ~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~ 117 (349)
T TIGR01364 39 ANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYT 117 (349)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCC
Confidence 456788888889974 346888877 999999999999999999887766653 56778888998 7666643 22
Q ss_pred CCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 203 ~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
..+|+++++. + .++++|.+++-.|.||...+
T Consensus 118 ~~~~~~~~~~--~-~~~~~v~~th~ETstGv~~~ 148 (349)
T TIGR01364 118 KIPDPSTWEI--S-EDAAYVHYCANETIHGVEFR 148 (349)
T ss_pred CCCCHHhcCC--C-CCCCEEEEcCCCCcccEecc
Confidence 3467776652 3 68999999999999999854
No 273
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.16 E-value=3.8e-05 Score=68.84 Aligned_cols=111 Identities=24% Similarity=0.301 Sum_probs=72.4
Q ss_pred HHHHHHHh--c-------cCCCCCCCcChHHHHHHHHHHcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCeEEE-cCC
Q 025730 112 EVREALGQ--L-------KFPYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVD-CPP 178 (249)
Q Consensus 112 ~v~~al~~--~-------~~~~~Yp~~g~~~lr~~la~~~~~~~~~I~v---t~Ga~~~l~~~~~~~~~pGd~Vlv-~~P 178 (249)
.|++|+++ + ..+++|.|.|-+.|.+..|+.|+.+. -++ --++|++|.+++..+++|||+++. ...
T Consensus 28 KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~ 105 (403)
T PF06838_consen 28 KVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAED--ALVRPQFVSGTHAIALALFGVLRPGDELLSITGK 105 (403)
T ss_dssp HHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SE--EEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS
T ss_pred HHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchh--hhhcccccchHHHHHHHHHhcCCCCCeEEEcCCC
Confidence 56677764 1 12355667788889999999998432 221 235799999999999999999994 333
Q ss_pred CChhHHHHH----------HHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEc
Q 025730 179 TFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (249)
Q Consensus 179 ~y~~~~~~~----------~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~ 225 (249)
-|....... ..+|.+...|++.+++.+|.+.++++++ .++|+|+|.
T Consensus 106 PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-~~tk~v~IQ 161 (403)
T PF06838_consen 106 PYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK-PNTKMVLIQ 161 (403)
T ss_dssp --CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-TTEEEEEEE
T ss_pred chhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc-cCceEEEEe
Confidence 455444444 2367899999988899999999999998 799999987
No 274
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.15 E-value=6.3e-05 Score=69.31 Aligned_cols=153 Identities=14% Similarity=0.186 Sum_probs=98.1
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCC----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+ .+.++ ..|.+.+++.+ +... ..|..+...+|.+.|+++.+ .+.++++++++++++.+++
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e~Alk 114 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANEAALK 114 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHHHHHH
Confidence 45567888764 22332 35778877765 3321 22333335678888888775 4689999999999999988
Q ss_pred Hhc--------CCCCeEEEcCCCChhHHHHHHHCCCEEEE----ecCCC----CCCCCHHHHHHhhccCCceEEEEcCCC
Q 025730 165 CVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKS----DFSLNVELIADAVEREKPKCIFLTSPN 228 (249)
Q Consensus 165 ~~~--------~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~----v~~~~----~~~id~e~l~~~i~~~~~k~i~l~~Pn 228 (249)
... ....+|+..+..|..+...+...+..... .+... ....|++.+++.++ .++++|++ .|.
T Consensus 115 ~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavii-EPv 192 (406)
T PRK12381 115 LARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID-DQTCAVIV-EPI 192 (406)
T ss_pred HHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc-CCeeEEEE-eCC
Confidence 641 13478999999997655433332221110 01000 11247899999997 57777776 799
Q ss_pred CccccCCC--hH--HHHHHHhhhhC
Q 025730 229 NPDGRFSW--TS--SWIWGISSEHN 249 (249)
Q Consensus 229 NPTG~~~~--~~--e~i~~i~~~~~ 249 (249)
|++|.++. .+ +.+.++|++||
T Consensus 193 ~~~gg~~~~~~~~l~~l~~l~~~~~ 217 (406)
T PRK12381 193 QGEGGVIPADKAFLQGLRELCDRHN 217 (406)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 99987653 33 55788999986
No 275
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.11 E-value=3e-05 Score=72.64 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=100.4
Q ss_pred CCHHHHHHHHh-----ccCCCCCCCcC--hHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHHHHHhcC-----C---CC-
Q 025730 109 PPPEVREALGQ-----LKFPYIYPDPE--SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLD-----P---GD- 171 (249)
Q Consensus 109 ~p~~v~~al~~-----~~~~~~Yp~~g--~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~~~~~~~~~-----p---Gd- 171 (249)
+++...+.+.. +.....||... ..++...+++.++.+. -.=.+|.|+|+++.+.+.+.-. . +.
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 33455555543 22224555321 2345555666667743 3567999999999987765411 1 11
Q ss_pred -----eEEEcCCCChhHHHHHHHCCCEEEEecCCC-CCCCCHHHHHHhhccCCceE--EEEcCCCCccccCCChHHHHHH
Q 025730 172 -----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKC--IFLTSPNNPDGRFSWTSSWIWG 243 (249)
Q Consensus 172 -----~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~-~~~id~e~l~~~i~~~~~k~--i~l~~PnNPTG~~~~~~e~i~~ 243 (249)
+|+++.-.|..+...+...|.+...++... ++.+|++++++++++ .+-. |+-+-.+.+||.+ ++.+.+..
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~-~t~~g~vV~~aGtT~~G~i-Ddi~~ia~ 231 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDE-NTIGGVVVGTAGTTDTGSI-DDIEELAD 231 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHh-hccCceEEEEecCCCCCcc-CCHHHHHH
Confidence 689999999999999999999999999655 799999999999984 4433 7767889999999 89999999
Q ss_pred HhhhhC
Q 025730 244 ISSEHN 249 (249)
Q Consensus 244 i~~~~~ 249 (249)
||++++
T Consensus 232 ia~~~~ 237 (460)
T COG0076 232 IAEEYG 237 (460)
T ss_pred HHHHcC
Confidence 999874
No 276
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.09 E-value=4.8e-05 Score=72.34 Aligned_cols=100 Identities=13% Similarity=0.091 Sum_probs=78.4
Q ss_pred EEEeCCHHHHHHHHHHHh----cC----------------------CCCeEEEcCCCChhHHHHHHHCCC---EEEEecC
Q 025730 149 ILVGCGADELIDLIMRCV----LD----------------------PGDKIVDCPPTFTMYEFDAAVNGA---AVVKVPR 199 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~----~~----------------------pGd~Vlv~~P~y~~~~~~~~~~G~---~v~~v~~ 199 (249)
-++|+|++++...++.+- +. ++..|++..-.|......++..|. +++.||.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~ 241 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT 241 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence 577899999887765432 11 235688888889988888888888 7999998
Q ss_pred CCCCCCCHHHHHHhhcc---CCceEEEEc--CCCCccccCCChHHHHHHHhhhhC
Q 025730 200 KSDFSLNVELIADAVER---EKPKCIFLT--SPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 200 ~~~~~id~e~l~~~i~~---~~~k~i~l~--~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++++.+|+++|++++++ .+++.++|+ ..++.||.+ .+.+.+..+|+++|
T Consensus 242 d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGai-Dpl~eIa~i~~~~g 295 (522)
T TIGR03799 242 DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNI-DPLDEMADIAQELG 295 (522)
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCc-CCHHHHHHHHHHcC
Confidence 88899999999999852 355666555 557799999 78888889999875
No 277
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.08 E-value=0.00016 Score=66.44 Aligned_cols=149 Identities=15% Similarity=0.220 Sum_probs=94.8
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccC----CCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~----~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...||+..+ ...++ ..|.+.+++.+ +.. ...|+.....+|.+.|+++++ .+.++++++++++.+.+++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e~Alk 110 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATF--ADKVFFCNSGAEANEAALK 110 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHHHHHH
Confidence 45678999775 23332 46788888765 332 123333335678888888876 4689999999999999998
Q ss_pred Hhc-------CCC-CeEEEcCCCChhHHH-HHHHCCCE------------EEEecCCCCCCCCHHHHHHhhccCCceEEE
Q 025730 165 CVL-------DPG-DKIVDCPPTFTMYEF-DAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (249)
Q Consensus 165 ~~~-------~pG-d~Vlv~~P~y~~~~~-~~~~~G~~------------v~~v~~~~~~~id~e~l~~~i~~~~~k~i~ 223 (249)
... .+| ++|+..+-.|..... .....|.. +..++. .|++++++.++ .++++|+
T Consensus 111 ~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~aavi 184 (397)
T TIGR03246 111 LARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-----NDLAAAKALIS-DKTCAVI 184 (397)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----CCHHHHHHHhc-cCeEEEE
Confidence 641 123 567777777764432 22323321 122221 37899999997 5788888
Q ss_pred EcCCCCccccCCCh-H--HHHHHHhhhhC
Q 025730 224 LTSPNNPDGRFSWT-S--SWIWGISSEHN 249 (249)
Q Consensus 224 l~~PnNPTG~~~~~-~--e~i~~i~~~~~ 249 (249)
+..++++.|...++ + +.+.++|++||
T Consensus 185 ~Epi~~~~G~~~~~~~~l~~l~~lc~~~g 213 (397)
T TIGR03246 185 VEPIQGEGGVVPADPAFLKGLRELCDRHN 213 (397)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 77545555655333 3 55788999986
No 278
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.08 E-value=3e-05 Score=70.46 Aligned_cols=130 Identities=17% Similarity=0.077 Sum_probs=89.4
Q ss_pred CCCCCCHHHHHHHHh-ccC-----------CCCCCC--cChHHHHHHHHHHcCCC-CCCEEE-eCCHHHHHHHHHHHhcC
Q 025730 105 NPYGPPPEVREALGQ-LKF-----------PYIYPD--PESRRLRAALAKDSGLE-SDHILV-GCGADELIDLIMRCVLD 168 (249)
Q Consensus 105 ~~~~~p~~v~~al~~-~~~-----------~~~Yp~--~g~~~lr~~la~~~~~~-~~~I~v-t~Ga~~~l~~~~~~~~~ 168 (249)
-|...|+.|++++.. +.. .++-++ .-..+.++.++++++.+ ..+|++ +++++.+++.++..++.
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~ 89 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG 89 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC
Confidence 355678899999875 311 111121 12567889999999973 345655 46778889999999999
Q ss_pred CCCeEEEcCCCCh--hHHHHHHHCCCEEEEecCCC-CCCCCHHHHHH-hhccCCceEEEEcCCCCccccCCC
Q 025730 169 PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 169 pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~~-~~~id~e~l~~-~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
+||++++..-+.. .+...++.+|.. ..+..+. ....+..++++ +++ .++++|.+++-.|.||...+
T Consensus 90 ~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-~~~~~V~~th~eTstGv~~~ 159 (360)
T PRK05355 90 GGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-DDAAYVHYTSNETIDGTEFH 159 (360)
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC-CCCCEEEEccCCCcceEecC
Confidence 9999887766653 566778888865 5555332 33344444444 676 57999999999999999963
No 279
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.01 E-value=0.00026 Score=65.11 Aligned_cols=148 Identities=13% Similarity=0.241 Sum_probs=92.8
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCCCC----CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYI----YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~~~----Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
++...||+..| ...++ ..|.+.+++.+ +..... +......+|.+.|+++.+ .+.++++++++++...+++
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e~a~k 115 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AERVFFANSGAEANEAAFK 115 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHHHHHH
Confidence 45668898776 23333 56778877765 322111 122224578888888765 3689999999999999988
Q ss_pred Hhc--------CCCCeEEEcCCCChhHHH-HHHHCC------------CEEEEecCCCCCCCCHHHHHHhhccCCceEEE
Q 025730 165 CVL--------DPGDKIVDCPPTFTMYEF-DAAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (249)
Q Consensus 165 ~~~--------~pGd~Vlv~~P~y~~~~~-~~~~~G------------~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~ 223 (249)
... ...++|+..+-.|..... .....| ..++.++. -|++.+++.+. .++++|+
T Consensus 116 lar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~aaii 189 (403)
T PRK05093 116 LARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-----NDLAAVKAVID-DHTCAVV 189 (403)
T ss_pred HHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----CCHHHHHHHhc-CCeEEEE
Confidence 541 123567777777754322 222111 11222221 27899999887 5788888
Q ss_pred EcCCCCccccCC--ChH--HHHHHHhhhhC
Q 025730 224 LTSPNNPDGRFS--WTS--SWIWGISSEHN 249 (249)
Q Consensus 224 l~~PnNPTG~~~--~~~--e~i~~i~~~~~ 249 (249)
++ |.||+|.++ +.+ +.+..+|++||
T Consensus 190 ie-p~~~~gg~~~~~~~~l~~l~~l~~~~g 218 (403)
T PRK05093 190 VE-PIQGEGGVIPATPEFLQGLRELCDQHN 218 (403)
T ss_pred Ee-cccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 66 888998765 333 55788999886
No 280
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.00 E-value=6.1e-05 Score=68.81 Aligned_cols=116 Identities=20% Similarity=0.175 Sum_probs=82.7
Q ss_pred HHHHHHHHHcCCCC-------CCEEEeCCHHHHHHHHHHHhc--------CCC-----C-eEEEcCCCChhHHHHHHHCC
Q 025730 133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVL--------DPG-----D-KIVDCPPTFTMYEFDAAVNG 191 (249)
Q Consensus 133 ~lr~~la~~~~~~~-------~~I~vt~Ga~~~l~~~~~~~~--------~pG-----d-~Vlv~~P~y~~~~~~~~~~G 191 (249)
++.+.+++++|++. ..=++|+|+++++...+.+.- ..| + .|++.+-+|......+...|
T Consensus 83 ~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lG 162 (373)
T PF00282_consen 83 EVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILG 162 (373)
T ss_dssp HHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTT
T ss_pred HHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceee
Confidence 45556666677762 246789999999987765431 112 2 46677778888999999999
Q ss_pred CEEEEecCCCCCCCCHHHHHHhhccC--C--ce-EEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 192 AAVVKVPRKSDFSLNVELIADAVERE--K--PK-CIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 192 ~~v~~v~~~~~~~id~e~l~~~i~~~--~--~k-~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..++.||.++++.+|+++|++++++. + +- +|+.+-.+..||.+ ++.+.+..||+++|
T Consensus 163 lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~-D~l~~i~~i~~~~~ 224 (373)
T PF00282_consen 163 LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI-DPLEEIADICEKYN 224 (373)
T ss_dssp SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--SHHHHHHHHHHCT
T ss_pred eEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccc-cCHHHHhhhccccc
Confidence 99999999888999999999987531 1 22 45555678889999 88899999999875
No 281
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=97.97 E-value=6e-05 Score=68.46 Aligned_cols=128 Identities=13% Similarity=0.071 Sum_probs=83.8
Q ss_pred CCCCCHHHHHHHHhcc--C---CCCCCC--cChHHHHHHHHHHcCCCCC-CEEEe-CCHHHHHHHHHHHhcCCCCeEEEc
Q 025730 106 PYGPPPEVREALGQLK--F---PYIYPD--PESRRLRAALAKDSGLESD-HILVG-CGADELIDLIMRCVLDPGDKIVDC 176 (249)
Q Consensus 106 ~~~~p~~v~~al~~~~--~---~~~Yp~--~g~~~lr~~la~~~~~~~~-~I~vt-~Ga~~~l~~~~~~~~~pGd~Vlv~ 176 (249)
|...++.+++++.... . .++-++ .-..+.|+.++++++++.+ +|+++ .++|.+++.++..++.+ +.+++.
T Consensus 11 P~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~ 89 (361)
T TIGR01366 11 PSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLS 89 (361)
T ss_pred CcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEe
Confidence 4556788999986421 1 122232 1367889999999998544 78886 55999999999998743 344444
Q ss_pred CCCCh-hHHHHHHHC--CCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH
Q 025730 177 PPTFT-MYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW 240 (249)
Q Consensus 177 ~P~y~-~~~~~~~~~--G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~ 240 (249)
.-.|. .+...+... +.++..++.+.+..++. .+. .++|+|.+++-.|.||.+.+.+++
T Consensus 90 ~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~lV~~~h~et~tG~~~pi~~I 150 (361)
T TIGR01366 90 FGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD-PGVDVIAWAHNETSTGVAVPVRRP 150 (361)
T ss_pred cCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC-CCCCEEEEcccCCccceecccccc
Confidence 55554 455555542 33666666443333333 233 689999999999999999765443
No 282
>PLN02624 ornithine-delta-aminotransferase
Probab=97.97 E-value=0.00015 Score=68.35 Aligned_cols=150 Identities=14% Similarity=0.161 Sum_probs=96.7
Q ss_pred CCCCeeeccCCCCCCC---CCHHHHHHHHh-ccC---C-CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANENPYG---PPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~---~p~~v~~al~~-~~~---~-~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...||+..+.-... ..|.+.+++.+ +.. . ..|..+...+|.+.|+++++ .+.++++++++++.+.+++
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e~Alk 150 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFG--YDMVLPMNTGAEGVETAIK 150 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcC--CCeEEEeCChHHHHHHHHH
Confidence 4566788877633222 36788888765 322 1 12344446789999999887 4589999999999999887
Q ss_pred HhcC--------C-CC-eEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCCCCCCHHHHHHhhcc--CCc
Q 025730 165 CVLD--------P-GD-KIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSLNVELIADAVER--EKP 219 (249)
Q Consensus 165 ~~~~--------p-Gd-~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~~~id~e~l~~~i~~--~~~ 219 (249)
.... + ++ +|+...-.|......+.. .+- .+..++. -|++.+++.++. .++
T Consensus 151 lAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~i 225 (474)
T PLN02624 151 LARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGDRI 225 (474)
T ss_pred HHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCCCE
Confidence 4321 1 33 577776666533222111 110 1122222 268889888853 457
Q ss_pred eEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 220 KCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 220 k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.+|++..++|++|.+++++ +.+.++|++||
T Consensus 226 aaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 226 AAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 8899999999999998765 45788999886
No 283
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=97.97 E-value=0.00015 Score=67.19 Aligned_cols=149 Identities=10% Similarity=0.069 Sum_probs=102.3
Q ss_pred eeeccCCCCCCCCCHHHHHHHHhccCCCCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCeEE
Q 025730 97 IVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDKIV 174 (249)
Q Consensus 97 ~I~L~~~~~~~~~p~~v~~al~~~~~~~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~-pGd~Vl 174 (249)
.|||=+-.-.-.+++.+.++|..-+ ..| .++...+|.+.+++++| .+.++.|..+..+-.++++.+++ |||+++
T Consensus 43 ~IDLrSDTgT~apS~~m~aAM~~GD--D~Y~gdpSv~~Lee~vael~G--~E~alpthqGRgaE~Il~~~~~~~~g~e~g 118 (467)
T TIGR02617 43 FIDLLTDSGTGAVTQSMQAAMMRGD--EAYSGSRSYYALAESVKNIFG--YQYTIPTHQGRGAEQIYIPVLIKKREQEKG 118 (467)
T ss_pred EEECccCCCCCCCCHHHHHHHHcCC--cccccCchHHHHHHHHHHHhC--CceEEECCCCchHHHHHHHhhccccccccc
Confidence 5787553333236788888887522 457 56778999999999999 45688887778888888888888 788777
Q ss_pred EcCC-------C-ChhHHHHHHHCCCEEEEecC----------CCCCCCCHHHHHHhhccC---CceEEEEcCCCCc-cc
Q 025730 175 DCPP-------T-FTMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNNP-DG 232 (249)
Q Consensus 175 v~~P-------~-y~~~~~~~~~~G~~v~~v~~----------~~~~~id~e~l~~~i~~~---~~k~i~l~~PnNP-TG 232 (249)
+..+ . |......+...|+.+..++. ..++.+|+++++++++.. +...+...--+|- -|
T Consensus 119 ~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GG 198 (467)
T TIGR02617 119 LDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGG 198 (467)
T ss_pred ccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCC
Confidence 5543 1 22334566779998887642 234689999999999742 2333332222344 36
Q ss_pred cCCChH--HHHHHHhhhhC
Q 025730 233 RFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 233 ~~~~~~--e~i~~i~~~~~ 249 (249)
++++.+ +.+..+|++||
T Consensus 199 qpvslenlr~V~~la~~~G 217 (467)
T TIGR02617 199 QPVSLANLKAVYEIAKKYD 217 (467)
T ss_pred EEeCHHHHHHHHHHHHHcC
Confidence 777777 45888999986
No 284
>PLN02271 serine hydroxymethyltransferase
Probab=97.97 E-value=0.00022 Score=67.74 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=98.4
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-c--cCCCCCCC------c-ChHHH----HHHHHHHcCCCC----CCEEEeCCHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPD------P-ESRRL----RAALAKDSGLES----DHILVGCGAD 156 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~--~~~~~Yp~------~-g~~~l----r~~la~~~~~~~----~~I~vt~Ga~ 156 (249)
..-|.|=..||. .++.+++++.. + .+..+||. . ..+++ .+...+.|+++. -+|-.- +++
T Consensus 148 ~~~l~LIASEN~--~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs 224 (586)
T PLN02271 148 FKGIELIASENF--VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCT 224 (586)
T ss_pred hcCeeecccccc--CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHH
Confidence 445788778885 46888888875 2 22233332 1 12333 233444567665 355554 567
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCChhHHHH---------HHHCCCEEEEec--C-CCCCCCCHHHHHHhhccCCceEEEE
Q 025730 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---------AAVNGAAVVKVP--R-KSDFSLNVELIADAVEREKPKCIFL 224 (249)
Q Consensus 157 ~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~---------~~~~G~~v~~v~--~-~~~~~id~e~l~~~i~~~~~k~i~l 224 (249)
.+...++.++++|||+|+..+..|..+... +...|..+..++ . .+++.+|.+++++.+...++|+|++
T Consensus 225 ~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~ 304 (586)
T PLN02271 225 SANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC 304 (586)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence 788888999999999999988877644332 233565544444 4 3567899999999555589999998
Q ss_pred cCCCCccccCCChHHHHHHHhhhhC
Q 025730 225 TSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 225 ~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..-.|| .. .+.+.+.+||+++|
T Consensus 305 g~Sayp--r~-~D~~~i~eIAdevG 326 (586)
T PLN02271 305 GGSSYP--RE-WDYARFRQIADKCG 326 (586)
T ss_pred Cchhcc--Cc-CCHHHHHHHHHHcC
Confidence 777777 33 35567788898865
No 285
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.96 E-value=0.00019 Score=71.87 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh----cCC----CCeEEEcCCCChhHHHHHHHCCCEEEEecCCCC
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV----LDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~----~~p----Gd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~ 202 (249)
..+|.+.+++.+|.+.-.+.-.+|+ ++-...++++ ..+ .++|+++.-.|......+...|++++.++.+++
T Consensus 545 i~elq~~l~eLtGmd~~Sl~p~sGA-~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~ 623 (954)
T PRK12566 545 IDELEAWLCAITGFDAICMQPNSGA-QGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPD 623 (954)
T ss_pred HHHHHHHHHHHHCCCeEeecCCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCC
Confidence 3567788888888655433333443 3332333332 222 267888888885444557779999999998878
Q ss_pred CCCCHHHHHHhhcc--CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 203 FSLNVELIADAVER--EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 ~~id~e~l~~~i~~--~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.+|+++|++++++ .++.+|++++|++-.+. ..+.+.+.++++++|
T Consensus 624 G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~-e~~V~eI~~iah~~G 671 (954)
T PRK12566 624 GNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY-EEGIREICEVVHQHG 671 (954)
T ss_pred CCcCHHHHHHHhhccCCCEEEEEEEecCcCcee-cchHHHHHHHHHHcC
Confidence 89999999999863 46778888888875444 355677888888875
No 286
>PLN02590 probable tyrosine decarboxylase
Probab=97.91 E-value=0.00016 Score=68.92 Aligned_cols=115 Identities=13% Similarity=0.124 Sum_probs=83.2
Q ss_pred HHHHHHHHcCCCCC-------CEEEeCCHHHHHHHHHHHh----cC-------CCCeEEEcCCCChhHHHHHHHCCC---
Q 025730 134 LRAALAKDSGLESD-------HILVGCGADELIDLIMRCV----LD-------PGDKIVDCPPTFTMYEFDAAVNGA--- 192 (249)
Q Consensus 134 lr~~la~~~~~~~~-------~I~vt~Ga~~~l~~~~~~~----~~-------pGd~Vlv~~P~y~~~~~~~~~~G~--- 192 (249)
+.+.+++.+|++.+ .=++++|++++...++.+. .+ +.-.|++.+-+|......+...|.
T Consensus 175 vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~ 254 (539)
T PLN02590 175 VLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEE 254 (539)
T ss_pred HHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcc
Confidence 44555555677642 3567899998887655432 11 112556678888899999999888
Q ss_pred EEEEecCC--CCCCCCHHHHHHhhccC-----CceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 193 AVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 193 ~v~~v~~~--~~~~id~e~l~~~i~~~-----~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.++.||.+ +++.+|+++|+++|++. .+-+|+.+-.+..||.+ ++.+.+..||++||
T Consensus 255 ~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai-Dpl~~Ia~i~~~~g 317 (539)
T PLN02590 255 NIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV-DPLVPLGNIAKKYG 317 (539)
T ss_pred cEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc-CCHHHHHHHHHHhC
Confidence 58888876 46789999999999631 23455555678889999 89999999999986
No 287
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.89 E-value=0.00034 Score=64.93 Aligned_cols=155 Identities=14% Similarity=0.105 Sum_probs=97.8
Q ss_pred CCCCeeeccCCCCC--C-CCCHHHHHHHHh-ccCC-C-CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 93 KPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFP-Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 93 ~~~~~I~L~~~~~~--~-~~p~~v~~al~~-~~~~-~-~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
.+...+|+..+... + ..++.+.+++.+ +... . .++.....+|.+.|++.+. ..+.++++++++++++.+++..
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~a 126 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRLA 126 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHHH
Confidence 45678999887532 2 356788887765 3322 2 2344556778888888763 2568999999999999999875
Q ss_pred cC--CCCeEEEcCCCChhHHHHHHHC-CC------------EEEEecCC--CCCCCCHHHHHHhhcc--CCceEEEEc-C
Q 025730 167 LD--PGDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRK--SDFSLNVELIADAVER--EKPKCIFLT-S 226 (249)
Q Consensus 167 ~~--pGd~Vlv~~P~y~~~~~~~~~~-G~------------~v~~v~~~--~~~~id~e~l~~~i~~--~~~k~i~l~-~ 226 (249)
.. .+++|+..++.|..+...+... |. ....+... .....|++.+++.++. .++.+|++. -
T Consensus 127 ~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv 206 (426)
T PRK00062 127 RGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPV 206 (426)
T ss_pred HHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCC
Confidence 33 3589999999998765332221 11 00000000 0001378888888752 356677766 3
Q ss_pred CCCccccCCChH---HHHHHHhhhhC
Q 025730 227 PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++| +|.+.++. +.+.++|++||
T Consensus 207 ~~~-~G~~~~~~~~l~~l~~l~~~~~ 231 (426)
T PRK00062 207 AGN-MGVVPPKPGFLEGLRELCDEHG 231 (426)
T ss_pred cCC-CCCcCCCHHHHHHHHHHHHHcC
Confidence 455 78886534 45788999886
No 288
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=97.88 E-value=0.00031 Score=66.21 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=90.1
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-c--cCCCCCCC----cC---hHHHHH----HHHHHcCCCCCCEEE---eCCHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPD----PE---SRRLRA----ALAKDSGLESDHILV---GCGADE 157 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~--~~~~~Yp~----~g---~~~lr~----~la~~~~~~~~~I~v---t~Ga~~ 157 (249)
.+.|.|=..||.. ++.+++++.. + .+..+||. .| ..++.+ ...+.|+...+.+++ ..+++.
T Consensus 34 ~~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~ 111 (475)
T PLN03226 34 WKGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSP 111 (475)
T ss_pred HcCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHH
Confidence 3458888888864 5788888765 3 23333321 12 333333 244456666555543 356677
Q ss_pred HHHHHHHHhcCCCCeEEEcCC---CChhHHHH---HHHCCCEE--E--EecC-CCCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 158 LIDLIMRCVLDPGDKIVDCPP---TFTMYEFD---AAVNGAAV--V--KVPR-KSDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 158 ~l~~~~~~~~~pGd~Vlv~~P---~y~~~~~~---~~~~G~~v--~--~v~~-~~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
+...++.++++|||+|+..+. +|...... .+..+... . .+.. .+++.+|++++++.+.+.++|+|++ .
T Consensus 112 AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~-~ 190 (475)
T PLN03226 112 ANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIA-G 190 (475)
T ss_pred HHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEE-e
Confidence 888899999999999998553 22221111 11112221 1 2222 2567899999999987567887765 3
Q ss_pred CCCccccCCChHHHHHHHhhhhC
Q 025730 227 PNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
-++ +|... +.+.+.++|+++|
T Consensus 191 ~S~-~s~~~-D~a~i~~ia~~~g 211 (475)
T PLN03226 191 ASA-YPRDW-DYARMRKIADKVG 211 (475)
T ss_pred cCc-CCCcc-CHHHHHHHHHHcC
Confidence 344 67664 5557778999875
No 289
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=97.87 E-value=0.0004 Score=63.76 Aligned_cols=150 Identities=13% Similarity=0.123 Sum_probs=96.0
Q ss_pred CCCCeeeccCCCCCCC---CCHHHHHHHHh-ccC-C--C-CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANENPYG---PPPEVREALGQ-LKF-P--Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~---~p~~v~~al~~-~~~-~--~-~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+-.... ..|.+.+++.+ +.. . . .+......+|.+.++++++ .+.++++++++++...++.
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e~ai~ 112 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFG--YDKVLPMNTGAEAVETAIK 112 (401)
T ss_pred CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcC--CCEEEEeCccHHHHHHHHH
Confidence 3456788877633322 35788888765 321 1 1 1222335789999999987 3689999999999999988
Q ss_pred Hhc---------CC-CCeEEEcCCCChhH-HHHHHHCCC------------EEEEecCCCCCCCCHHHHHHhhcc--CCc
Q 025730 165 CVL---------DP-GDKIVDCPPTFTMY-EFDAAVNGA------------AVVKVPRKSDFSLNVELIADAVER--EKP 219 (249)
Q Consensus 165 ~~~---------~p-Gd~Vlv~~P~y~~~-~~~~~~~G~------------~v~~v~~~~~~~id~e~l~~~i~~--~~~ 219 (249)
... .+ .++|+...-.|... .......|. .+..++. .|++++++.+++ .++
T Consensus 113 ~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~ 187 (401)
T TIGR01885 113 LARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-----NNLEALEEALEDHGPNV 187 (401)
T ss_pred HHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-----CCHHHHHHHHHhcCCCE
Confidence 641 13 35677777776532 222222221 1222322 268889888853 356
Q ss_pred eEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 220 KCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 220 k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.+|++..+++++|.+.++. +.+.++|++||
T Consensus 188 ~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~ 220 (401)
T TIGR01885 188 CAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHN 220 (401)
T ss_pred EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 6787778899999997644 56888999885
No 290
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=97.87 E-value=0.0004 Score=70.42 Aligned_cols=138 Identities=12% Similarity=0.075 Sum_probs=94.0
Q ss_pred ccCCCCCCCCCHHHHHHHHh-ccCC---CCC-CC--cC----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-c
Q 025730 100 IDANENPYGPPPEVREALGQ-LKFP---YIY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-L 167 (249)
Q Consensus 100 L~~~~~~~~~p~~v~~al~~-~~~~---~~Y-p~--~g----~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~ 167 (249)
++.|--+.-.|+.+.+++.+ .... ..| |+ .| ..+++..+++++|++++++.+..|++.+.+.+++++ +
T Consensus 108 iG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 108 IGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred cCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhc
Confidence 34444455567788777765 3222 344 32 22 467899999999999999999999999999888766 4
Q ss_pred CCC--CeEEEcCCCChhHH----HHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHH
Q 025730 168 DPG--DKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 168 ~pG--d~Vlv~~P~y~~~~----~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i 241 (249)
.+| |+|++.+-.|+.+. ..++..|++++.++.+.. + ... ..+-.+++.+|| -+|.+. +.+.+
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~-~~v~~vlvq~P~-~~G~v~-dv~~I 255 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS-GDVCGVLVQYPA-TDGEVL-DYAEF 255 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc-CceEEEEEecCC-CCeEEc-CHHHH
Confidence 544 78999999998554 344557999999986321 1 111 234345545565 499995 56667
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|+++|
T Consensus 256 ~~~ah~~G 263 (993)
T PLN02414 256 VKNAHANG 263 (993)
T ss_pred HHHHHHcC
Confidence 77788764
No 291
>PLN02880 tyrosine decarboxylase
Probab=97.84 E-value=0.00022 Score=67.50 Aligned_cols=116 Identities=14% Similarity=0.114 Sum_probs=83.4
Q ss_pred HHHHHHHHHcCCCCC-------CEEEeCCHHHHHHHHHHHh----cC-------CCCeEEEcCCCChhHHHHHHHCCCE-
Q 025730 133 RLRAALAKDSGLESD-------HILVGCGADELIDLIMRCV----LD-------PGDKIVDCPPTFTMYEFDAAVNGAA- 193 (249)
Q Consensus 133 ~lr~~la~~~~~~~~-------~I~vt~Ga~~~l~~~~~~~----~~-------pGd~Vlv~~P~y~~~~~~~~~~G~~- 193 (249)
++.+.+++++|++.+ .-++|+|++++...++.+. ++ +.-.|++.+-+|......+...|..
T Consensus 126 ~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~ 205 (490)
T PLN02880 126 IVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHP 205 (490)
T ss_pred HHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCH
Confidence 355566666687653 3678899999876655432 11 1124667788899999999999984
Q ss_pred --EEEecCC--CCCCCCHHHHHHhhccC-----CceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 194 --VVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 194 --v~~v~~~--~~~~id~e~l~~~i~~~-----~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
++.||.+ +++.+|+++|++++++. .+-+|+.+-.+..||.+ .+.+.+..+|++||
T Consensus 206 ~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai-Dpl~eI~~i~~~~~ 269 (490)
T PLN02880 206 ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV-DPLLELGKIAKSNG 269 (490)
T ss_pred HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc-CcHHHHHHHHHHcC
Confidence 7788865 36789999999998631 13455555678899999 78899999999986
No 292
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=97.77 E-value=0.00039 Score=63.34 Aligned_cols=149 Identities=15% Similarity=0.220 Sum_probs=98.1
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccC----CCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~----~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+- ..++ ..|.+.+++.+ +.. ...|+.....+|.+.++++.+ .+.++++++++++++.+++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~SGseA~e~Alk 99 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVN--YEYVYMGNSGTEAVEAALK 99 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcC--CCEEEEeCchHHHHHHHHH
Confidence 456678887653 3343 34677777765 332 123554456778888888876 3589999999999999988
Q ss_pred Hh-cCCC-CeEEEcCCCChhHHHHHHH-CC-------CE-----EEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCC
Q 025730 165 CV-LDPG-DKIVDCPPTFTMYEFDAAV-NG-------AA-----VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (249)
Q Consensus 165 ~~-~~pG-d~Vlv~~P~y~~~~~~~~~-~G-------~~-----v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnN 229 (249)
.. ...| ++|+...-+|......+.. .+ .. +..++. .|++.+++.+. .++++|++.....
T Consensus 100 lar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~-~~~aAvivEpi~g 173 (364)
T PRK04013 100 FARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-----NDVEAAKEAIT-KETAAVIFEPIQG 173 (364)
T ss_pred HHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-----CCHHHHHHHhc-CCcEEEEEcCCcC
Confidence 54 2345 8999999888654322222 11 11 112221 26889999887 6788888776666
Q ss_pred ccccCCChH---HHHHHHhhhhC
Q 025730 230 PDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 230 PTG~~~~~~---e~i~~i~~~~~ 249 (249)
-.|....+. +.+.++|++||
T Consensus 174 ~gG~~~~~~~yl~~lr~lc~~~g 196 (364)
T PRK04013 174 EGGIVPAKEEFVKTLRDLTEDVG 196 (364)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcC
Confidence 667765563 55788899986
No 293
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=97.77 E-value=0.00024 Score=64.95 Aligned_cols=119 Identities=10% Similarity=-0.016 Sum_probs=86.5
Q ss_pred HHHHHHh--ccCCCCCCCc--ChHHHHHHHHHHcCCCCCC--EEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCCh-hHH
Q 025730 113 VREALGQ--LKFPYIYPDP--ESRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFT-MYE 184 (249)
Q Consensus 113 v~~al~~--~~~~~~Yp~~--g~~~lr~~la~~~~~~~~~--I~vt~Ga~~~l~~~~~~~~-~pGd~Vlv~~P~y~-~~~ 184 (249)
..+++.+ +...++-|.- -..+.++.+.+.++.+.+. ++++.|++.+++.++..++ ++||+|++.. .|+ .+.
T Consensus 19 ~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~ 97 (374)
T TIGR01365 19 SIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV 97 (374)
T ss_pred hHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH
Confidence 6677764 3333333432 2567788888888874433 5679999999999999998 5899999876 665 445
Q ss_pred -HHHHHCCC-EEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChH
Q 025730 185 -FDAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 185 -~~~~~~G~-~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~ 238 (249)
.+++..|. ++..+..+.+..+|+++++. + +.|+++|-...||+..+.+
T Consensus 98 ~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~----~~v~~vhnETSTGv~npv~ 147 (374)
T TIGR01365 98 TDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K----NDVVFTWNGTTSGVRVPNG 147 (374)
T ss_pred HHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C----CCEEEecCCCchheecccc
Confidence 78888999 47777766677889999973 1 2367888888999996653
No 294
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.74 E-value=0.00092 Score=67.85 Aligned_cols=137 Identities=13% Similarity=0.104 Sum_probs=95.7
Q ss_pred ccCCCCCCCCCHHHHHHHHh-ccCCCCC-CC-----cC----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-c
Q 025730 100 IDANENPYGPPPEVREALGQ-LKFPYIY-PD-----PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-L 167 (249)
Q Consensus 100 L~~~~~~~~~p~~v~~al~~-~~~~~~Y-p~-----~g----~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~ 167 (249)
++.|--+.-.|..+.+.+.+ -.+...| |. +| ..++++.++++.|++..++.+..+++.+.+.+++++ .
T Consensus 81 ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~ 160 (954)
T PRK05367 81 IGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRV 160 (954)
T ss_pred cCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhh
Confidence 45555555566667565554 2322344 32 23 357889999999999999999999999999888776 4
Q ss_pred CCC--CeEEEcCCCChhHH----HHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHH
Q 025730 168 DPG--DKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 168 ~pG--d~Vlv~~P~y~~~~----~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i 241 (249)
.++ |+|++++-.|+.+. ..++..|++++.++.+.+ ++ . .++-++++.+|| -+|.+. +.+.+
T Consensus 161 ~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~--------~-~~~~~vlvq~p~-~~G~i~-d~~~i 227 (954)
T PRK05367 161 SKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD--------H-DDVFGVLLQYPG-TSGEVR-DYTAL 227 (954)
T ss_pred ccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC--------c-ccEEEEEEecCC-CCeeec-cHHHH
Confidence 454 89999999998554 345668999999986432 11 1 355566666774 599996 56667
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++|+++|
T Consensus 228 ~~~ah~~G 235 (954)
T PRK05367 228 IAAAHARG 235 (954)
T ss_pred HHHHHHcC
Confidence 77787764
No 295
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.69 E-value=0.00046 Score=62.81 Aligned_cols=156 Identities=16% Similarity=0.238 Sum_probs=101.8
Q ss_pred CCCCCeeeccCC--CCCCC-CCHHHHHHHHh-c---c-CCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---K-FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 92 ~~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~---~-~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
..+...|||..| .+.++ ..|.+.+++.+ . . ..+.|.++...+|-+.|++..+ ..+.|+++|+++|+++.++
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~EaAi 117 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEAAL 117 (404)
T ss_pred CCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHHHH
Confidence 346678888776 34443 56888888875 2 2 2355665556778888888887 6889999999999999998
Q ss_pred HHh---cC-CC-CeEEEcCCCChhHHHHHHHCCCEEEEe----cCCCCCC----CCHHHHHHhhccCCceEEEEcCCCCc
Q 025730 164 RCV---LD-PG-DKIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSPNNP 230 (249)
Q Consensus 164 ~~~---~~-pG-d~Vlv~~P~y~~~~~~~~~~G~~v~~v----~~~~~~~----id~e~l~~~i~~~~~k~i~l~~PnNP 230 (249)
... .. ++ .+|+...-.|..-...+-..+.+..+- |.-.++. =|+++++++++ +++.+|++---.--
T Consensus 118 KlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~-~~taAvivEPIQGE 196 (404)
T COG4992 118 KLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID-EDTAAVIVEPIQGE 196 (404)
T ss_pred HHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc-cCeEEEEEecccCC
Confidence 753 22 22 367766666642111111112221110 1111111 18999999999 58999987776788
Q ss_pred cccCCChHHH---HHHHhhhhC
Q 025730 231 DGRFSWTSSW---IWGISSEHN 249 (249)
Q Consensus 231 TG~~~~~~e~---i~~i~~~~~ 249 (249)
.|+...+.+. +.+||++||
T Consensus 197 gGV~~~~~~fl~~lr~lCd~~g 218 (404)
T COG4992 197 GGVIPAPPEFLKALRELCDEHG 218 (404)
T ss_pred CCCCCCCHHHHHHHHHHHHHhC
Confidence 8888777654 688999986
No 296
>PLN02955 8-amino-7-oxononanoate synthase
Probab=97.68 E-value=0.004 Score=58.53 Aligned_cols=147 Identities=13% Similarity=0.044 Sum_probs=93.6
Q ss_pred CCeeeccCCCC-CCCCCHHHHHHHHh-cc-CCCCC-------CCc-ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 95 EDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYIY-------PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 95 ~~~I~L~~~~~-~~~~p~~v~~al~~-~~-~~~~Y-------p~~-g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.++++|+.|+- -+...+.++++..+ +. ++.+. ... ...+|.++||+++| .+..++.+.+..+...++
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g--~e~all~sSGy~AN~~~i 179 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK--KEDCLVCPTGFAANMAAM 179 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC--CCcEEEECChHHHHHHHH
Confidence 46788887753 23455677766543 21 21111 111 13679999999999 455666677777766666
Q ss_pred HHhc--------------CCCCeEEEcCCCChhHHHHHHHC----CCEEEEecCCCCCCCCHHHHHHhhcc--CCceEEE
Q 025730 164 RCVL--------------DPGDKIVDCPPTFTMYEFDAAVN----GAAVVKVPRKSDFSLNVELIADAVER--EKPKCIF 223 (249)
Q Consensus 164 ~~~~--------------~pGd~Vlv~~P~y~~~~~~~~~~----G~~v~~v~~~~~~~id~e~l~~~i~~--~~~k~i~ 223 (249)
.+++ ..+|.|+.-.-.|.....-++.. +++++.++- -|++.|++.+++ .+.++|+
T Consensus 180 ~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-----ND~~~Le~~L~~~~~~~~~Vv 254 (476)
T PLN02955 180 VAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-----CDMYHLNSLLSSCKMKRKVVV 254 (476)
T ss_pred HHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-----CCHHHHHHHHHhCCCCceEEE
Confidence 6652 45567777666777666666665 577777663 378888888753 2334555
Q ss_pred EcCCCCccccCCChHHHHHHHhhhhC
Q 025730 224 LTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 224 l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+...-++.|.+ .+.+.+..+|++||
T Consensus 255 ~EgV~SmdGdi-apL~eL~~L~~~~g 279 (476)
T PLN02955 255 TDSLFSMDGDF-APMEELSQLRKKYG 279 (476)
T ss_pred EeCCCCCCCCc-CCHHHHHHHHHHcC
Confidence 44557889998 45777777888875
No 297
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=97.68 E-value=0.0014 Score=60.10 Aligned_cols=148 Identities=14% Similarity=0.083 Sum_probs=105.1
Q ss_pred CCCeeeccCCCCC-CCCCHHHHHHHHh-ccC-C-----CC--CCCc-ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 94 PEDIVKIDANENP-YGPPPEVREALGQ-LKF-P-----YI--YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 94 ~~~~I~L~~~~~~-~~~p~~v~~al~~-~~~-~-----~~--Yp~~-g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
...+++|..|+-. +...+.++++..+ +.. + .+ +... -..+|.+.||+|+|. +..++-+++-.+...+
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~--e~al~f~SGy~AN~~~ 115 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA--EAALLFSSGFVANLGL 115 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEEcccchhHHHH
Confidence 3567888887642 3445666666554 221 1 11 2222 257899999999994 4555556667788888
Q ss_pred HHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccC-----CceEEEEcCCCCccccCCCh
Q 025730 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGRFSWT 237 (249)
Q Consensus 163 ~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~-----~~k~i~l~~PnNPTG~~~~~ 237 (249)
+.+++++||.|+.-.-.|.....-++..+++++.+.- .|+++|++.+++. +.++|+....=.-.|.+ -+
T Consensus 116 i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdi-Ap 189 (388)
T COG0156 116 LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDI-AP 189 (388)
T ss_pred HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCc-CC
Confidence 9999999999999999998888888899999988874 4789999988641 23555555665557887 46
Q ss_pred HHHHHHHhhhhC
Q 025730 238 SSWIWGISSEHN 249 (249)
Q Consensus 238 ~e~i~~i~~~~~ 249 (249)
...+..|+++||
T Consensus 190 L~~l~~L~~ky~ 201 (388)
T COG0156 190 LPELVELAEKYG 201 (388)
T ss_pred HHHHHHHHHHhC
Confidence 667777888875
No 298
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.62 E-value=0.001 Score=64.38 Aligned_cols=114 Identities=12% Similarity=0.093 Sum_probs=84.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---c------C----------------------------------
Q 025730 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---L------D---------------------------------- 168 (249)
Q Consensus 132 ~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~---~------~---------------------------------- 168 (249)
.++-+.+++++|.+..+=.+|+|++++....+... . +
T Consensus 126 ~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~ 205 (608)
T TIGR03811 126 EEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQI 205 (608)
T ss_pred HHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccch
Confidence 34666677777887666678899998877654331 1 0
Q ss_pred ---------CC------CeEEEcCCCChhHHHHHHHCCC---EEEEecCCCCCCCCHHHHHHhhcc---CC--ceEEEEc
Q 025730 169 ---------PG------DKIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVER---EK--PKCIFLT 225 (249)
Q Consensus 169 ---------pG------d~Vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~~id~e~l~~~i~~---~~--~k~i~l~ 225 (249)
+| -+++++.-.|..+...+...|. .++.||.++++.+|+++|++++++ .+ +-+|+-+
T Consensus 206 ~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVat 285 (608)
T TIGR03811 206 DEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGV 285 (608)
T ss_pred hhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 00 0578888889999999999998 589999989999999999998853 22 3345556
Q ss_pred CCCCccccCCChHHHHHHHhh
Q 025730 226 SPNNPDGRFSWTSSWIWGISS 246 (249)
Q Consensus 226 ~PnNPTG~~~~~~e~i~~i~~ 246 (249)
-.+..+|.+ ++.+.+..||+
T Consensus 286 aGTT~~Gai-Dpl~eI~~l~~ 305 (608)
T TIGR03811 286 VGSTEEGAV-DGIDKIVALRN 305 (608)
T ss_pred cCCcCCccc-CCHHHHHHHHH
Confidence 678899999 88888888883
No 299
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.53 E-value=2.7e-05 Score=69.16 Aligned_cols=96 Identities=23% Similarity=0.398 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHcC------CCCCCEEEeCCHHHHHHHHHHHhcCC------CCeEEEcCCCChhHHHHHHHCCCEEEEec
Q 025730 131 SRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDP------GDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (249)
Q Consensus 131 ~~~lr~~la~~~~------~~~~~I~vt~Ga~~~l~~~~~~~~~p------Gd~Vlv~~P~y~~~~~~~~~~G~~v~~v~ 198 (249)
..+|.+.|.+++. .+...|++++|++++++.++.++... --+|+...|.|+.|...............
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 5789999999873 24458999999999999999988432 14899999999999988766443322222
Q ss_pred -CCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 199 -RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 199 -~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
....|. +- +...+-+=++|+||||.|.+
T Consensus 125 Gda~~~~-~~-------~~~~~~IElVTSPNNPDG~l 153 (363)
T PF04864_consen 125 GDASNFK-NS-------DNPSPYIELVTSPNNPDGQL 153 (363)
T ss_dssp EECCCGT-T--------S-CCGEEEEEESS-TTT---
T ss_pred ccHHhhc-cC-------CCCCCeEEEEeCCCCCcccc
Confidence 111121 10 00234455789999999987
No 300
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.00051 Score=60.74 Aligned_cols=150 Identities=15% Similarity=0.180 Sum_probs=99.2
Q ss_pred CCCCeeeccCCCCCCCCCHHHHHHHH----hcc-C---CCC--CCCc-C-hHHHHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 025730 93 KPEDIVKIDANENPYGPPPEVREALG----QLK-F---PYI--YPDP-E-SRRLRAALAKDSGLESDHILVGCGADELID 160 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~~p~~v~~al~----~~~-~---~~~--Yp~~-g-~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~ 160 (249)
.+.++|.|+.|.--.-++....+..+ +.. . ... -++. + ...|-..++...|..+++++++.+++--|+
T Consensus 28 lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~ 107 (407)
T COG3844 28 LPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLF 107 (407)
T ss_pred CCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHH
Confidence 46778999887654433232222221 111 0 011 1221 2 345778888889999999999999998888
Q ss_pred HHHHHhcC--CCCeEEEcCCC-Ch----hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 161 LIMRCVLD--PGDKIVDCPPT-FT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 161 ~~~~~~~~--pGd~Vlv~~P~-y~----~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
.++.+.++ +|++|++++-. |+ .....+...|.. .+-...+.+++++++++ .++.+|++++.|.-||+
T Consensus 108 k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~~~P~~~~~~~~-dd~AvV~L~~V~y~TGq 181 (407)
T COG3844 108 KVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGVIAPRALEEAIT-DDVAVVLLSHVNYKTGQ 181 (407)
T ss_pred HHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceeeeChHHHHHhhc-cceEEEEeccccccccc
Confidence 88887754 58888887644 32 222333333322 22334567889999998 78999999999999999
Q ss_pred CCChHHHHHHHhhhhC
Q 025730 234 FSWTSSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~~e~i~~i~~~~~ 249 (249)
.+ +...+..++++|+
T Consensus 182 l~-dm~aiT~~AH~~g 196 (407)
T COG3844 182 LL-DMRAITALAHQHG 196 (407)
T ss_pred ee-eHHHHHHHHHhcC
Confidence 95 7777778888775
No 301
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=97.47 E-value=0.00051 Score=63.09 Aligned_cols=149 Identities=19% Similarity=0.169 Sum_probs=84.6
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCC----cC---hHH----HHHHHHHHcCCCCCCEEE---eCCHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD----PE---SRR----LRAALAKDSGLESDHILV---GCGADEL 158 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~----~g---~~~----lr~~la~~~~~~~~~I~v---t~Ga~~~ 158 (249)
.-|.|-..||.. ++.+++++.. +. +..+||. .| .++ ..+.+.+.|++++++..+ ..+++.+
T Consensus 21 ~~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~A 98 (399)
T PF00464_consen 21 STLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQA 98 (399)
T ss_dssp HSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHH
T ss_pred cCccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHH
Confidence 348888888864 5788888875 22 2222332 12 222 344555667887654322 4566779
Q ss_pred HHHHHHHhcCCCCeEEEcCCCChhHHH---H--H-----HHCCCEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCC
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFTMYEF---D--A-----AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~~~~~---~--~-----~~~G~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~P 227 (249)
...++.++++|||+|+..++....+.. . . .....+.+.++.+ +++.+|.|++++.+++.++|+|++.--
T Consensus 99 n~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S 178 (399)
T PF00464_consen 99 NLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGAS 178 (399)
T ss_dssp HHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-S
T ss_pred HHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECch
Confidence 999999999999999998887753321 0 0 1133567777765 678999999999998889999996543
Q ss_pred CCccccCCChHHHHHHHhhhhC
Q 025730 228 NNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 228 nNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.|- . .+-+.+.+||++.|
T Consensus 179 ~y~~--~-~d~~~~reIad~vg 197 (399)
T PF00464_consen 179 SYPR--P-IDFKRFREIADEVG 197 (399)
T ss_dssp STSS------HHHHHHHHHHTT
T ss_pred hccC--c-cCHHHHHHHHHhcC
Confidence 3321 1 23466788888754
No 302
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=97.46 E-value=0.0036 Score=57.63 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=91.1
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCC-CCCCCcChHHHHHHHHHHcC-C-CCCCEEEeCCHHHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDSG-L-ESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~-~~Yp~~g~~~lr~~la~~~~-~-~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
.+...+|+..+ ...++ ..|.+.+++.+ +... +.+. ....++...+++++. . ..+.++++++++++.+.+++.
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ 112 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP-AFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKL 112 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHH
Confidence 35677888764 22333 35788888765 3221 1111 122345555666553 1 246899999999999999886
Q ss_pred hc------CCC-CeEEEcCCCChhHHHHH-HHCCCEEE---EecCCCCC----CCCHHHHHHhhccCCceEEEEcCCCCc
Q 025730 166 VL------DPG-DKIVDCPPTFTMYEFDA-AVNGAAVV---KVPRKSDF----SLNVELIADAVEREKPKCIFLTSPNNP 230 (249)
Q Consensus 166 ~~------~pG-d~Vlv~~P~y~~~~~~~-~~~G~~v~---~v~~~~~~----~id~e~l~~~i~~~~~k~i~l~~PnNP 230 (249)
.. ++| .+|+..+..|......+ ...|.... ..|...++ ..|++.+++.++ .++.+|++...++.
T Consensus 113 ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavi~Epv~~~ 191 (395)
T PRK03715 113 ARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT-DKTVAVMLEPVQGE 191 (395)
T ss_pred HHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC-CCceEEEEeCCcCC
Confidence 63 133 67888888886543332 22332211 11111111 247899999887 56777776655555
Q ss_pred cccCCChH---HHHHHHhhhhC
Q 025730 231 DGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 231 TG~~~~~~---e~i~~i~~~~~ 249 (249)
.|...++. +.+..+|++||
T Consensus 192 gG~~~~~~~~l~~l~~l~~~~~ 213 (395)
T PRK03715 192 GGVIPATREFMQQLRALTKQHG 213 (395)
T ss_pred CCCccCCHHHHHHHHHHHHHcC
Confidence 66664433 55778899886
No 303
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.42 E-value=0.0044 Score=54.45 Aligned_cols=113 Identities=20% Similarity=0.238 Sum_probs=81.0
Q ss_pred HHHHHHHhc---------cCCCCCCCcChHHHHHHHHHHcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCeEEEc-CCC
Q 025730 112 EVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDC-PPT 179 (249)
Q Consensus 112 ~v~~al~~~---------~~~~~Yp~~g~~~lr~~la~~~~~~~~--~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~-~P~ 179 (249)
.|+++++.- ..+++|-|-|.+.|.+-.|+.+|.+.. ..-+.+ +|++|.+++..+++|||+.+.. .--
T Consensus 39 kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~P 117 (416)
T COG4100 39 KVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQIIS-GTHAIACALFGILRPGDELLYITGSP 117 (416)
T ss_pred HHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCc
Confidence 566777641 112445566788899999999985433 122334 5889999999999999998843 223
Q ss_pred ChhHHHHH----------HHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 180 FTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 180 y~~~~~~~----------~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
|....... ..+|.+...+|+..++.+|.+.+.++++ .++|+|.|..
T Consensus 118 YDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~-~~tkli~IQR 173 (416)
T COG4100 118 YDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS-DRTKLIGIQR 173 (416)
T ss_pred chhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcC-ccceEEEEEe
Confidence 44444333 2366788888988889999999999998 7999999863
No 304
>PLN02452 phosphoserine transaminase
Probab=97.39 E-value=0.0017 Score=59.20 Aligned_cols=138 Identities=14% Similarity=0.036 Sum_probs=91.4
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHh-c-c----------CCCCCCCc--ChHHHHHHHHHHcCCCCC-C-EEEeCCHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELI 159 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~-~-~----------~~~~Yp~~--g~~~lr~~la~~~~~~~~-~-I~vt~Ga~~~l 159 (249)
.++.|.. -|...|+.|++++.. + . ..++-++- -..+.++.|.++++++.+ + +++..|++.++
T Consensus 7 ~~~~f~p--GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ 84 (365)
T PLN02452 7 RVFNFSA--GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQF 84 (365)
T ss_pred ceEeeeC--CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHH
Confidence 3444543 355577889888764 2 1 22332321 256788888888998443 3 55678899999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEecC-CCC--CCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 160 DLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPR-KSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~-~~~--~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
+.++..++.+||++++..-+.. .+...++.+|...+.... ..+ ..+++++++. . .+.+.|++|+-...||+.
T Consensus 85 ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~hnETstGv~ 161 (365)
T PLN02452 85 AAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--T-PDAKFVHICANETIHGVE 161 (365)
T ss_pred HHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--C-CCCcEEEECCCCCCCcEe
Confidence 9999999999999887776653 466677778864444421 111 2467777532 2 568899999999999996
Q ss_pred CChH
Q 025730 235 SWTS 238 (249)
Q Consensus 235 ~~~~ 238 (249)
+++.
T Consensus 162 ~~~~ 165 (365)
T PLN02452 162 FKDY 165 (365)
T ss_pred cCcc
Confidence 5543
No 305
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=97.37 E-value=0.0037 Score=58.93 Aligned_cols=149 Identities=15% Similarity=0.054 Sum_probs=95.4
Q ss_pred CCeeeccCCCCCCCCCHHHHHHHHh-c--cCCCCCC------Cc-ChHH----HHHHHHHHcCCCCCCEEEeCCHHHHHH
Q 025730 95 EDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------DP-ESRR----LRAALAKDSGLESDHILVGCGADELID 160 (249)
Q Consensus 95 ~~~I~L~~~~~~~~~p~~v~~al~~-~--~~~~~Yp------~~-g~~~----lr~~la~~~~~~~~~I~vt~Ga~~~l~ 160 (249)
.+.|.|=..||.. ++.+++++.. + .+..+|| .. ...+ ..+...+.|+.+--+|-.-+| +.+..
T Consensus 49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg-~~An~ 125 (493)
T PRK13580 49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSG-ADANL 125 (493)
T ss_pred hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCc-HHHHH
Confidence 4458888888864 5788888875 2 1222332 11 1222 334444557766666666555 55777
Q ss_pred HHHHHhcCC-------------------------------CCeEEEcCCCChhHHH---HHHHCC--CEEEEecCC-CCC
Q 025730 161 LIMRCVLDP-------------------------------GDKIVDCPPTFTMYEF---DAAVNG--AAVVKVPRK-SDF 203 (249)
Q Consensus 161 ~~~~~~~~p-------------------------------Gd~Vlv~~P~y~~~~~---~~~~~G--~~v~~v~~~-~~~ 203 (249)
.++.++++| ||+|+..++..+.+.. .....| .+++.++.+ +++
T Consensus 126 ~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g 205 (493)
T PRK13580 126 VAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTG 205 (493)
T ss_pred HHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccC
Confidence 888888876 8999988776642211 111122 445555544 457
Q ss_pred CCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 204 SLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 204 ~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
.+|.+++++.++ .+++.|++++.+|-.+ . .+.+.+.+||+++|
T Consensus 206 ~iD~d~l~~~~~-~~~plvii~g~S~~~~-~-~dl~~i~eia~~~g 248 (493)
T PRK13580 206 LLDYDEIAALAR-EFKPLILVAGYSAYPR-R-VNFAKLREIADEVG 248 (493)
T ss_pred ccCHHHHHHHHh-hcCCEEEEeCccccCC-C-cCHHHHHHHHHHcC
Confidence 899999999998 5677777888877644 5 36777888898875
No 306
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.31 E-value=0.0033 Score=56.94 Aligned_cols=147 Identities=21% Similarity=0.205 Sum_probs=93.6
Q ss_pred CeeeccCCCCCCCCCHHHHHHHHh-c--cCCCCCCC------cC-hHH----HHHHHHHHcCCCCCCEEEeCCHHHHHHH
Q 025730 96 DIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPD------PE-SRR----LRAALAKDSGLESDHILVGCGADELIDL 161 (249)
Q Consensus 96 ~~I~L~~~~~~~~~p~~v~~al~~-~--~~~~~Yp~------~g-~~~----lr~~la~~~~~~~~~I~vt~Ga~~~l~~ 161 (249)
+.|.|=..||- .++.|++++.. + .+..+||. .. .++ ..+...++||.+--+|-..+|+ ++...
T Consensus 27 ~~ieLIASEN~--~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs-~AN~a 103 (413)
T COG0112 27 EHIELIASENF--TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGS-QANQA 103 (413)
T ss_pred hceeeeecccc--CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCch-HHHHH
Confidence 45788788885 46888888865 2 22233432 11 122 2344445678776777776765 57778
Q ss_pred HHHHhcCCCCeEEEcCCCChhHHHHH---HHCC--CEEEEecCC-CCCCCCHHHHHHhhccCCceEEEEcCCCCccccCC
Q 025730 162 IMRCVLDPGDKIVDCPPTFTMYEFDA---AVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFS 235 (249)
Q Consensus 162 ~~~~~~~pGd~Vlv~~P~y~~~~~~~---~~~G--~~v~~v~~~-~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~ 235 (249)
++.++++|||+|+-.+-.+..+.... ...| .+++.++.+ +++.+|.|++++.+.+.++|+|+.-.--.|- .
T Consensus 104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~r--~- 180 (413)
T COG0112 104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYSR--P- 180 (413)
T ss_pred HHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECcccccc--c-
Confidence 88899999999998877776443322 1123 345555655 5688999999999988999999853221111 1
Q ss_pred ChHHHHHHHhhhh
Q 025730 236 WTSSWIWGISSEH 248 (249)
Q Consensus 236 ~~~e~i~~i~~~~ 248 (249)
-+-+...+||++.
T Consensus 181 id~~~~reIad~V 193 (413)
T COG0112 181 IDFKRFREIADEV 193 (413)
T ss_pred cCHHHHHHHHHHh
Confidence 1235566777664
No 307
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.21 E-value=0.0063 Score=56.38 Aligned_cols=157 Identities=12% Similarity=0.215 Sum_probs=91.8
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCC---C--CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~---~--~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...+|+..+ ...++ ..|.+.+++.+ +... . .|+.....+|.+.|++.+.-..+.++++++++++.+.++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~ 119 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVAL 119 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHH
Confidence 45667888766 33333 34777777765 3321 1 234333456777777776433468999999999999988
Q ss_pred HHhcC-------CC-CeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCC--CCCCHHHHHHhhcc--CC
Q 025730 164 RCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD--FSLNVELIADAVER--EK 218 (249)
Q Consensus 164 ~~~~~-------pG-d~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~--~~id~e~l~~~i~~--~~ 218 (249)
+.... +| .+|+...-.|......+.. .+- .+..++...+ ...+++.+++.+.+ .+
T Consensus 120 klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~ 199 (423)
T PRK05964 120 KMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGE 199 (423)
T ss_pred HHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCc
Confidence 85421 33 5788888888643322221 111 1122332111 11227888887752 34
Q ss_pred ceEEEEcC-CCCccccCCChH---HHHHHHhhhhC
Q 025730 219 PKCIFLTS-PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 219 ~k~i~l~~-PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+.+|++.- .+...|...++. +.+..+|++||
T Consensus 200 iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g 234 (423)
T PRK05964 200 IAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHG 234 (423)
T ss_pred EEEEEEecccccCCCcccCCHHHHHHHHHHHHHcC
Confidence 55666543 367778776554 44788999886
No 308
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=97.20 E-value=0.012 Score=54.42 Aligned_cols=155 Identities=14% Similarity=0.183 Sum_probs=92.0
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCCCC----CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYI----YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~~~----Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...||+..+. ..++ ..|.+.+++.+ +..... |......+|-+.|++..+. .+.++++++++++.+.+++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e~Alk 116 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANEAAIK 116 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHHHHHH
Confidence 456778887663 3333 45777777765 332111 2222234566666665432 2689999999999999887
Q ss_pred HhcC--------CC-CeEEEcCCCChhHHHHHH-HCCCEEEE---ecCCCC----CCCCHHHHHHhhccCCceEEEEcCC
Q 025730 165 CVLD--------PG-DKIVDCPPTFTMYEFDAA-VNGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLTSP 227 (249)
Q Consensus 165 ~~~~--------pG-d~Vlv~~P~y~~~~~~~~-~~G~~v~~---v~~~~~----~~id~e~l~~~i~~~~~k~i~l~~P 227 (249)
.... ++ .+|+....+|......+. ..|..... -+...+ ...|++.+++.++ .+..+.+|..|
T Consensus 117 lAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~aavi~eP 195 (408)
T PRK04612 117 LVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA-GGDVAAVMLEP 195 (408)
T ss_pred HHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC-CCCEEEEEECC
Confidence 5321 22 468888888864433222 22211100 010011 1127899999886 45566777889
Q ss_pred CCccccCCChH----HHHHHHhhhhC
Q 025730 228 NNPDGRFSWTS----SWIWGISSEHN 249 (249)
Q Consensus 228 nNPTG~~~~~~----e~i~~i~~~~~ 249 (249)
.+++|.+++.. +.+.++|++||
T Consensus 196 ~~~~gg~~~~~~~~l~~l~~l~~~~g 221 (408)
T PRK04612 196 IQGEGGVMPAAPGFLARVRALCDQHD 221 (408)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 98888776643 45788999886
No 309
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=97.18 E-value=0.01 Score=55.50 Aligned_cols=157 Identities=17% Similarity=0.172 Sum_probs=90.5
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCCCCC-----CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~~~Y-----p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
++...||+..+ ...++ ..+.+.+++.+ +.....+ ..+...+|-+.|++..+..-+.++++++++|+.+.++
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~Al 118 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAI 118 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHH
Confidence 45667888776 33343 45777777765 3322111 1222355666676666543368999999999999998
Q ss_pred HHhc--CCCCeEEEcCCCChhHHH-HHHHCCC------------EEEEecCCCC----CC--------CCHHHHHHhhcc
Q 025730 164 RCVL--DPGDKIVDCPPTFTMYEF-DAAVNGA------------AVVKVPRKSD----FS--------LNVELIADAVER 216 (249)
Q Consensus 164 ~~~~--~pGd~Vlv~~P~y~~~~~-~~~~~G~------------~v~~v~~~~~----~~--------id~e~l~~~i~~ 216 (249)
+... ....+|+...-.|..... .....|. .+..++..+. +. -+++.+++.+++
T Consensus 119 klAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (443)
T PRK08360 119 KFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEG 198 (443)
T ss_pred HHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHh
Confidence 8532 223577777766653321 1111221 1233332111 10 124556666642
Q ss_pred ----CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 217 ----EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 217 ----~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.++++|++.--+||+|.++++. +.+.++|++||
T Consensus 199 ~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g 238 (443)
T PRK08360 199 EVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHG 238 (443)
T ss_pred ccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 4677887663359999988755 44777899886
No 310
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.17 E-value=0.0022 Score=59.34 Aligned_cols=137 Identities=16% Similarity=0.203 Sum_probs=81.7
Q ss_pred CCCCCCCCCHHHHHHHH-hccCCCCC-C---C--cC----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---c
Q 025730 102 ANENPYGPPPEVREALG-QLKFPYIY-P---D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---L 167 (249)
Q Consensus 102 ~~~~~~~~p~~v~~al~-~~~~~~~Y-p---~--~g----~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~---~ 167 (249)
.|.-..-.|+.+.+.+. +-.+...| | + .| .-++...+++..|++.-+.-+-.|++..-+.+.++. -
T Consensus 72 ~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~ 151 (429)
T PF02347_consen 72 AGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATK 151 (429)
T ss_dssp CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHT
T ss_pred ccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcc
Confidence 33333445566666344 33333334 3 2 23 357888999999987655566567766655554433 2
Q ss_pred CCCCeEEEcCCCChhHHHHH----HHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHH
Q 025730 168 DPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWG 243 (249)
Q Consensus 168 ~pGd~Vlv~~P~y~~~~~~~----~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~ 243 (249)
+..++|+++.-.|+.+.... ...|.+++.++.+++...| + .++.+|++.+||. .|.+- +.+.+.+
T Consensus 152 ~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~-~~~a~v~vq~Pn~-~G~~e-d~~~i~~ 220 (429)
T PF02347_consen 152 RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------D-DDTAAVMVQNPNT-FGVFE-DIKEIAD 220 (429)
T ss_dssp T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------S-TTEEEEEEESS-T-TSB---THHHHHH
T ss_pred cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------c-cCeEEEEeecCCC-CceEe-eHHHHHH
Confidence 33469999999998777643 4489999999976665555 3 7899999999995 78884 4777888
Q ss_pred HhhhhC
Q 025730 244 ISSEHN 249 (249)
Q Consensus 244 i~~~~~ 249 (249)
+++++|
T Consensus 221 ~~h~~g 226 (429)
T PF02347_consen 221 IAHAAG 226 (429)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 888765
No 311
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.08 E-value=0.0092 Score=54.35 Aligned_cols=133 Identities=13% Similarity=0.023 Sum_probs=83.4
Q ss_pred eeccCCCCCCCCCHHHHHHHHh-c-c----------CCCCCCCc--ChHHHHHHHHHHcCCCC-CCEE-EeCCHHHHHHH
Q 025730 98 VKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDP--ESRRLRAALAKDSGLES-DHIL-VGCGADELIDL 161 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~-~-~----------~~~~Yp~~--g~~~lr~~la~~~~~~~-~~I~-vt~Ga~~~l~~ 161 (249)
+.|+.| |-..|++|++++++ + . ..+|-+.- -..+.++.+.+.++++. .+|+ +..|++.++..
T Consensus 6 ~nF~aG--Pa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea 83 (364)
T PRK12462 6 LNFSGG--PGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM 83 (364)
T ss_pred ceecCC--CcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH
Confidence 344443 33456788877763 2 1 11222221 24667778888889844 3555 56669999999
Q ss_pred HHHHhcCCCCeEE--EcCCCCh-hHHHHHHHCCCEEEEecC--C--CCCCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 162 IMRCVLDPGDKIV--DCPPTFT-MYEFDAAVNGAAVVKVPR--K--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 162 ~~~~~~~pGd~Vl--v~~P~y~-~~~~~~~~~G~~v~~v~~--~--~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
+...++.+||+++ +.+-.|. -+...++.+| ++..+.. . ....++++++ .+. .+.+.|++|+-...||+.
T Consensus 84 ~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~-~d~~~v~~t~NETstGv~ 159 (364)
T PRK12462 84 IPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD-ARAPFRHYVSNETVEGLQ 159 (364)
T ss_pred HHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC-CCCcEEEEccCCCCceEe
Confidence 9999999999665 5555565 4566666677 5444431 1 1234556665 222 467889999888899998
Q ss_pred CC
Q 025730 235 SW 236 (249)
Q Consensus 235 ~~ 236 (249)
++
T Consensus 160 ~~ 161 (364)
T PRK12462 160 FP 161 (364)
T ss_pred cC
Confidence 74
No 312
>PLN00144 acetylornithine transaminase
Probab=97.07 E-value=0.019 Score=52.54 Aligned_cols=150 Identities=15% Similarity=0.200 Sum_probs=90.0
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...||+..+. ..++ ..|.+.+++.+ +... ..|......+|-+.|++..+ .+.|+++++++++.+.+++
T Consensus 13 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~Alk 90 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANEAAIK 90 (382)
T ss_pred CCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHHHH
Confidence 456678887663 2232 45777777765 3321 11222234556666666554 4689999999999999887
Q ss_pred Hhc---C------C------CCeEEEcCCCChhHHHHHHH-CCCE------------EEEecCCCCCCCCHHHHHHhhcc
Q 025730 165 CVL---D------P------GDKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDFSLNVELIADAVER 216 (249)
Q Consensus 165 ~~~---~------p------Gd~Vlv~~P~y~~~~~~~~~-~G~~------------v~~v~~~~~~~id~e~l~~~i~~ 216 (249)
... . + ..+|+...-+|......+.. .+-. +..++. -|++.+++.+..
T Consensus 91 lAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~ 165 (382)
T PLN00144 91 FARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQK 165 (382)
T ss_pred HHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-----CCHHHHHHhcCC
Confidence 542 1 0 24788888888654433332 2211 112221 278999988864
Q ss_pred CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 217 EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 217 ~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.++++|++.--+||.|....+. +.+.++|++||
T Consensus 166 ~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g 201 (382)
T PLN00144 166 GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAG 201 (382)
T ss_pred CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 5677777663378855543222 45788999886
No 313
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.00 E-value=0.0035 Score=57.79 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=86.6
Q ss_pred HHHHHHHHHHcCCCCCCE-EEeCCHHHHHHHHHHHhc----C-CC---CeEEEcCCCChhHHHHHHHCCCEEEEecCC-C
Q 025730 132 RRLRAALAKDSGLESDHI-LVGCGADELIDLIMRCVL----D-PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S 201 (249)
Q Consensus 132 ~~lr~~la~~~~~~~~~I-~vt~Ga~~~l~~~~~~~~----~-pG---d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~-~ 201 (249)
.+....++.+++-+++.+ ..|.|+++++.+.....- . .| -.++++.-.+..+...++.++.++..|+.+ .
T Consensus 123 ~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~ 202 (491)
T KOG1383|consen 123 AECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEG 202 (491)
T ss_pred HHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeecccc
Confidence 445566666777655432 368899999666554431 1 12 356666777778999999999999999976 7
Q ss_pred CCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhh
Q 025730 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSE 247 (249)
Q Consensus 202 ~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~ 247 (249)
+|.+|+.++.+.++ +++.+|+..-|+.|+|.. .+.+.+.++..+
T Consensus 203 ~~~~D~~k~~~~i~-eNti~lv~~~~~~p~G~~-e~ve~l~~l~~e 246 (491)
T KOG1383|consen 203 DYRVDPGKVVRMID-ENTIMLVGSLPNFPTGEI-EDVEKLADLLLE 246 (491)
T ss_pred ceEecHHHHHHHhc-cceEEEEEEcCCCCccch-hhHHHHHHHHHH
Confidence 89999999999998 799999999999999999 777777666655
No 314
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=96.94 E-value=0.026 Score=52.36 Aligned_cols=155 Identities=10% Similarity=0.080 Sum_probs=81.0
Q ss_pred CCCCeeeccCCCCCCC---CCHHHHHHHHh-ccCC-CC-CC---CcChHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANENPYG---PPPEVREALGQ-LKFP-YI-YP---DPESRRLRAALAKDSGLES-DHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~---~p~~v~~al~~-~~~~-~~-Yp---~~g~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~~~ 162 (249)
.++..+|+..+..... .++.+.+++.+ +... +. ++ .+...+|-+.+++..+... +.++++++++++++.+
T Consensus 39 dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~A 118 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENA 118 (425)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHH
Confidence 4566788877643332 36777777765 3221 11 12 2223345555555555332 3566666666766655
Q ss_pred HHHh---cCCCCeEEEcCCCChhHHHHHHHCCCEE--------------EE--ecCCCCCCCC----HHHHHHhhc----
Q 025730 163 MRCV---LDPGDKIVDCPPTFTMYEFDAAVNGAAV--------------VK--VPRKSDFSLN----VELIADAVE---- 215 (249)
Q Consensus 163 ~~~~---~~pGd~Vlv~~P~y~~~~~~~~~~G~~v--------------~~--v~~~~~~~id----~e~l~~~i~---- 215 (249)
++.. .++ .+|+...++|......+...+... .. +|.+.. +.+ ++.+++.++
T Consensus 119 lklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~~ 196 (425)
T PRK08088 119 VKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDAA 196 (425)
T ss_pred HHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhccC
Confidence 5432 333 567777999976554444332221 11 121111 122 456777774
Q ss_pred cCCceEEEEc-CCCCccccCCChH--HHHHHHhhhhC
Q 025730 216 REKPKCIFLT-SPNNPDGRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 216 ~~~~k~i~l~-~PnNPTG~~~~~~--e~i~~i~~~~~ 249 (249)
..+..+|++. ..+|+.+...+++ +.+.++|++||
T Consensus 197 ~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~ 233 (425)
T PRK08088 197 PEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHG 233 (425)
T ss_pred CCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 2345666644 2367755554554 44788898875
No 315
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=96.92 E-value=0.036 Score=51.23 Aligned_cols=155 Identities=17% Similarity=0.184 Sum_probs=95.2
Q ss_pred CCCCeeeccCCCCCC---CCCHHHHHHHHh-ccCCCCCCCc--ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 93 KPEDIVKIDANENPY---GPPPEVREALGQ-LKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~---~~p~~v~~al~~-~~~~~~Yp~~--g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
++...||+-.+--+. -.+|.|.+++++ +..+..|..+ ..-++-+.+.+.++. .+.|-++|++||+...+++..
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtmsAiRlA 129 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPS-IEKVRFVNSGTEATMSAIRLA 129 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCc-ccEEEEecchhHHHHHHHHHH
Confidence 345566766554443 246789999987 6666777433 234456666666652 278999999999999887742
Q ss_pred --cCCCCeEEEcCCCChhHHHHHHH-CC--CEEEE------ecCC--CC---C-CCCHHHHHHhhccC--CceEEEEc-C
Q 025730 167 --LDPGDKIVDCPPTFTMYEFDAAV-NG--AAVVK------VPRK--SD---F-SLNVELIADAVERE--KPKCIFLT-S 226 (249)
Q Consensus 167 --~~pGd~Vlv~~P~y~~~~~~~~~-~G--~~v~~------v~~~--~~---~-~id~e~l~~~i~~~--~~k~i~l~-~ 226 (249)
...-|+|+..+-+|......+.. .| ..... +|.+ .+ . -=|++.+++++++. ++.+|++. -
T Consensus 130 Ra~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv 209 (432)
T COG0001 130 RAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPV 209 (432)
T ss_pred HHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccc
Confidence 12238999999999754444333 22 21111 1110 00 0 12789999998754 55566544 2
Q ss_pred CCCccccCCChHH---HHHHHhhhhC
Q 025730 227 PNNPDGRFSWTSS---WIWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~e---~i~~i~~~~~ 249 (249)
+.| -|.+.+.++ .+.+||++||
T Consensus 210 ~gn-~g~i~p~~~Fl~~Lr~lt~e~G 234 (432)
T COG0001 210 AGN-MGVVPPEPGFLEGLRELTEEHG 234 (432)
T ss_pred cCC-CCCCCCCHHHHHHHHHHHHHcC
Confidence 345 788766664 4788999886
No 316
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=96.92 E-value=0.018 Score=58.29 Aligned_cols=137 Identities=15% Similarity=0.128 Sum_probs=94.1
Q ss_pred ccCCCCCCCCCHHHHHHHHh-ccCCCCC-C---C--cC----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-c
Q 025730 100 IDANENPYGPPPEVREALGQ-LKFPYIY-P---D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-L 167 (249)
Q Consensus 100 L~~~~~~~~~p~~v~~al~~-~~~~~~Y-p---~--~g----~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~-~ 167 (249)
++.|--+.-.|+.+.+.+.+ -.+...| | + +| .-+++..++++.|++..|.-+-.+++.+.+.++++. .
T Consensus 69 ig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~ 148 (939)
T TIGR00461 69 IGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNV 148 (939)
T ss_pred CCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHh
Confidence 34555555567888766654 3322334 3 2 23 357888999999999888888889888888777653 2
Q ss_pred --CCCCeEEEcCCCChhHHH----HHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHH
Q 025730 168 --DPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWI 241 (249)
Q Consensus 168 --~pGd~Vlv~~P~y~~~~~----~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i 241 (249)
+++++|++++-.|+.+.. .++..|.+++.++ ++++++.+ ++.++++.+||. +|.+. +.+.+
T Consensus 149 ~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~---~~~~v~~q~Pn~-~G~ie-d~~~i 215 (939)
T TIGR00461 149 SKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV---DVFGCLLQYPAT-DGSIL-DYKQL 215 (939)
T ss_pred hcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC---CEEEEEEECCCC-CeEEe-cHHHH
Confidence 234899999999986663 4456899988874 34565544 467888889985 89985 55666
Q ss_pred HHHhhhhC
Q 025730 242 WGISSEHN 249 (249)
Q Consensus 242 ~~i~~~~~ 249 (249)
.++++++|
T Consensus 216 ~~~~h~~g 223 (939)
T TIGR00461 216 IDALHSHK 223 (939)
T ss_pred HHHHHHcC
Confidence 67777654
No 317
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=96.88 E-value=0.04 Score=51.10 Aligned_cols=157 Identities=15% Similarity=0.184 Sum_probs=91.2
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCCC--C---CCCcChHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY--I---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~~--~---Yp~~g~~~lr~~la~~~~~-~~~~I~vt~Ga~~~l~~~ 162 (249)
+++..||+..+- ..++ ..|.+.+++.+ +.... . ++.+...+|-+.|++.... ..+.++++++++++.+.+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~A 117 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENA 117 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHH
Confidence 456678886652 2232 45677777765 33211 1 1222234666677766542 235789999999999988
Q ss_pred HHHhc-CCC-CeEEEcCCCChhHHHHH-HHCCC-------------EEEEecCCCC-CCC----CHHHHHHhhcc----C
Q 025730 163 MRCVL-DPG-DKIVDCPPTFTMYEFDA-AVNGA-------------AVVKVPRKSD-FSL----NVELIADAVER----E 217 (249)
Q Consensus 163 ~~~~~-~pG-d~Vlv~~P~y~~~~~~~-~~~G~-------------~v~~v~~~~~-~~i----d~e~l~~~i~~----~ 217 (249)
++... -.| .+|+...-+|......+ ...|. .+..+|...+ .++ +++.+++.+++ .
T Consensus 118 lklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~ 197 (421)
T PRK09792 118 VKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAK 197 (421)
T ss_pred HHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCC
Confidence 87542 123 57888888876433222 11121 1233332111 112 34777777752 4
Q ss_pred CceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 218 KPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 218 ~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++.+|++.-.++++|..+.+. +.+.++|++||
T Consensus 198 ~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g 232 (421)
T PRK09792 198 QVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHG 232 (421)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 567887765589999876453 45788899886
No 318
>PRK06541 hypothetical protein; Provisional
Probab=96.81 E-value=0.035 Score=52.21 Aligned_cols=157 Identities=17% Similarity=0.211 Sum_probs=90.9
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC-----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+- ..++ ..|.+.+++.+ +... ..|+.+...+|-+.|++...-..+.++++++++++.+.++
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~Al 129 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAW 129 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHH
Confidence 356678887762 3333 45778877765 3321 1233333456777777765433468999999999999888
Q ss_pred HHhcC-------C-CCeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCC-----CCCC--------HHH
Q 025730 164 RCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD-----FSLN--------VEL 209 (249)
Q Consensus 164 ~~~~~-------p-Gd~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~-----~~id--------~e~ 209 (249)
+.... + ..+|+...-+|......+.. .|. .+..+|.... +.-+ ++.
T Consensus 130 klAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK06541 130 KLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADR 209 (460)
T ss_pred HHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHH
Confidence 74321 1 36788887777543322211 111 1233332111 1112 366
Q ss_pred HHHhhcc--CCceEEEEcCC-CCccccCCChH---HHHHHHhhhhC
Q 025730 210 IADAVER--EKPKCIFLTSP-NNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 210 l~~~i~~--~~~k~i~l~~P-nNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++.+++ .+..+.+|.-| .++.|.+.++. +.+.++|++||
T Consensus 210 l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g 255 (460)
T PRK06541 210 IEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYD 255 (460)
T ss_pred HHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 7777752 23445555666 88899886644 44788999886
No 319
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=96.69 E-value=0.094 Score=48.20 Aligned_cols=144 Identities=12% Similarity=0.062 Sum_probs=97.7
Q ss_pred eccCCCCCCCCCHHHHHHHH-hccCCCCC-C---C--cC----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-
Q 025730 99 KIDANENPYGPPPEVREALG-QLKFPYIY-P---D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV- 166 (249)
Q Consensus 99 ~L~~~~~~~~~p~~v~~al~-~~~~~~~Y-p---~--~g----~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~- 166 (249)
-++.|.-+.-.|+.+.+.+. +-.+...| | + .| .-++...++++.|++-.|--+--|+|.+-+.+.++.
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence 45556666667777774544 44443444 3 2 23 346778888888987777666677776666655543
Q ss_pred --cCCCCeEEEcCCCChhHHHHHHH----CCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHHH
Q 025730 167 --LDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW 240 (249)
Q Consensus 167 --~~pGd~Vlv~~P~y~~~~~~~~~----~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~ 240 (249)
-++..+++++.-.|+.+....+. .|.+++.++.+ |+++++++ ++.++-++++.+|| -.|....+.+.
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~ 231 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DDGDVFGVLVQYPN-TFGIVEEDLRA 231 (450)
T ss_pred hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-cccCeEEEEEecCC-CCCccchhHHH
Confidence 22358999999999866655444 67788877764 77888888 54578899999998 47866566677
Q ss_pred HHHHhhhhC
Q 025730 241 IWGISSEHN 249 (249)
Q Consensus 241 i~~i~~~~~ 249 (249)
+..+++++|
T Consensus 232 l~~~~h~~~ 240 (450)
T COG0403 232 LIEAAHSAG 240 (450)
T ss_pred HHHHHhhcC
Confidence 777777654
No 320
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=96.65 E-value=0.072 Score=49.78 Aligned_cols=156 Identities=11% Similarity=0.126 Sum_probs=85.8
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCCCCC-----CCcChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIY-----PDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~~~Y-----p~~g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~ 162 (249)
.+...||+..+- ..++ ..+.+.+++.+ +.....+ +.....+|-+.|++.+... .+.++++++++++.+.+
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~A 133 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENA 133 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHH
Confidence 456778887763 3332 45778887765 3322111 2222345666666665422 25788889999999998
Q ss_pred HHHh--cCCCCeEEEcCCCChhHHHHHHH-CCC-------------EEEEecCCCCCC------C--------CHHHHHH
Q 025730 163 MRCV--LDPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS------L--------NVELIAD 212 (249)
Q Consensus 163 ~~~~--~~pGd~Vlv~~P~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~------i--------d~e~l~~ 212 (249)
++.. ....++|+....+|..+...+.. .+. .+..++....+. . .++.+++
T Consensus 134 lklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (443)
T PRK06058 134 VKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEK 213 (443)
T ss_pred HHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHH
Confidence 8832 12237899999999765543322 111 122222111111 1 1233344
Q ss_pred hhccCCceEEEEcCCCCccccCC-ChH---HHHHHHhhhhC
Q 025730 213 AVEREKPKCIFLTSPNNPDGRFS-WTS---SWIWGISSEHN 249 (249)
Q Consensus 213 ~i~~~~~k~i~l~~PnNPTG~~~-~~~---e~i~~i~~~~~ 249 (249)
.+...++.+|+ .-|-+..|-++ ++. +.+.++|++||
T Consensus 214 ~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~g 253 (443)
T PRK06058 214 QVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENG 253 (443)
T ss_pred hhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 44324555555 67776665443 333 45788999986
No 321
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=96.65 E-value=0.066 Score=49.77 Aligned_cols=157 Identities=13% Similarity=0.089 Sum_probs=89.6
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC-----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..|- ..++ ..|.+.+++.+ +... ..|..+...+|.+.|++++.-..+.++++++++++.+.++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~Al 120 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGAL 120 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHH
Confidence 456788887763 3333 45678877765 3221 1233334567888888887433468999999999999998
Q ss_pred HHhc--CCCCeEEEcCCCChhHHHHHH-HCCC-------------EEEEecCCCCCC------------CCHHHHHHhhc
Q 025730 164 RCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA-------------AVVKVPRKSDFS------------LNVELIADAVE 215 (249)
Q Consensus 164 ~~~~--~pGd~Vlv~~P~y~~~~~~~~-~~G~-------------~v~~v~~~~~~~------------id~e~l~~~i~ 215 (249)
+... ....+|+...-.|......+. ..+. .+..+|....+. -|++.+++.++
T Consensus 121 klAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 200 (433)
T PRK08117 121 KLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFK 200 (433)
T ss_pred HHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHH
Confidence 8521 123678877777764332221 1110 122333211111 14566666654
Q ss_pred c----CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 216 R----EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 216 ~----~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+ .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 201 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g 241 (433)
T PRK08117 201 HQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHG 241 (433)
T ss_pred hccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcC
Confidence 2 3455555544345567775544 44788999886
No 322
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=96.61 E-value=0.059 Score=50.42 Aligned_cols=152 Identities=14% Similarity=0.106 Sum_probs=89.6
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccC---CCCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~---~~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+ ...++ ..|.+.+++.+ +.. ..+| ..+...+|-+.|++.+.-..+.++++++++|+.+.+++
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~Alk 152 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALK 152 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHH
Confidence 45677888776 44443 45777777765 322 2223 33345567777777664333679999999999999987
Q ss_pred HhcC----CC-CeEEEcCCCChhHHHHHHH-CCCE------------EEEecCCCCCCCCHHHHHHhhcc-----CCceE
Q 025730 165 CVLD----PG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (249)
Q Consensus 165 ~~~~----pG-d~Vlv~~P~y~~~~~~~~~-~G~~------------v~~v~~~~~~~id~e~l~~~i~~-----~~~k~ 221 (249)
..-. .| .+|+...-.|......+.. .|-. +..+|. .|.+.+++.++. .++.+
T Consensus 153 lAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAa 227 (442)
T TIGR03372 153 LAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAA 227 (442)
T ss_pred HHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEE
Confidence 4321 23 6788888888644332222 2211 122221 256777776642 34556
Q ss_pred EEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 222 IFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 222 i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
|++.--..--|...++. +.+.++|++||
T Consensus 228 vIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g 258 (442)
T TIGR03372 228 IILEPIQGEGGVILPPEGYLPAVRALCDEFG 258 (442)
T ss_pred EEEeCccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 65544444457766554 45788999886
No 323
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=96.41 E-value=0.1 Score=48.48 Aligned_cols=156 Identities=13% Similarity=0.143 Sum_probs=88.0
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC-----CCCCCcChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~ 162 (249)
.+...||+..+. ..++ ..|.+.+++.+ +... ..|+.+...+|-+.|++.+.-. .+.++++++++++.+.+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~A 117 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENA 117 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHH
Confidence 456678887663 2232 45778888765 3321 1234344556777777766422 25899999999999998
Q ss_pred HHHhc--CCCCeEEEcCCCChhHHHHHHH-CCC-------------EEEEecCCC-CCCCC----HHHHHHhhc----cC
Q 025730 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS-DFSLN----VELIADAVE----RE 217 (249)
Q Consensus 163 ~~~~~--~pGd~Vlv~~P~y~~~~~~~~~-~G~-------------~v~~v~~~~-~~~id----~e~l~~~i~----~~ 217 (249)
++... ....+|+...-.|......+.. .|. .++.+|... ..+.+ ++.+++.++ ..
T Consensus 118 lklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~ 197 (425)
T PRK07495 118 VKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQ 197 (425)
T ss_pred HHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCC
Confidence 87432 2236788888877644322211 110 223344221 11222 445566653 23
Q ss_pred CceEEEEc-CCCCccccCC-ChH--HHHHHHhhhhC
Q 025730 218 KPKCIFLT-SPNNPDGRFS-WTS--SWIWGISSEHN 249 (249)
Q Consensus 218 ~~k~i~l~-~PnNPTG~~~-~~~--e~i~~i~~~~~ 249 (249)
++.+|++. ..+| +|... +++ +.+.++|++||
T Consensus 198 ~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g 232 (425)
T PRK07495 198 RVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHG 232 (425)
T ss_pred ceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcC
Confidence 56677655 2356 78553 333 44788899886
No 324
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.41 E-value=0.15 Score=47.46 Aligned_cols=156 Identities=12% Similarity=0.103 Sum_probs=90.9
Q ss_pred CCCCeeeccCCCC--CCC-CCHHHHHHHHh-ccCC--CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 93 ~~~~~I~L~~~~~--~~~-~p~~v~~al~~-~~~~--~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
.+...||+..+-. .++ ..|.+.+++.+ +... ..++.+...+|-+.|++.+. ..+.+.++++++++.+.+++..
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~AlklA 129 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIRVA 129 (428)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHHHH
Confidence 4566788866632 232 34778888765 4322 23344445667777777664 2468999999999999998853
Q ss_pred c--CCCCeEEEcCCCChhHHHHHH-HCCCEEE--------Eec--CCCC----CCCCHHHHHHhhcc--CCceEEEEcCC
Q 025730 167 L--DPGDKIVDCPPTFTMYEFDAA-VNGAAVV--------KVP--RKSD----FSLNVELIADAVER--EKPKCIFLTSP 227 (249)
Q Consensus 167 ~--~pGd~Vlv~~P~y~~~~~~~~-~~G~~v~--------~v~--~~~~----~~id~e~l~~~i~~--~~~k~i~l~~P 227 (249)
. ....+|+...-.|......+. ..|.... .++ ...+ ..-|++.+++.+++ .++.+|++.-.
T Consensus 130 r~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv 209 (428)
T PRK12389 130 RAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPI 209 (428)
T ss_pred HHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCC
Confidence 2 123678888877765433222 2221111 000 0000 01268888888853 24555655544
Q ss_pred CCccccCCChH---HHHHHHhhhhC
Q 025730 228 NNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 228 nNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
..-.|.+.++. +.+.++|++||
T Consensus 210 ~g~~G~~~p~~~yl~~l~~lc~~~g 234 (428)
T PRK12389 210 VGNFGIVEPKPGFLEAVNELAHEAG 234 (428)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 45567775544 45788999886
No 325
>PRK07046 aminotransferase; Validated
Probab=96.35 E-value=0.16 Score=47.68 Aligned_cols=154 Identities=12% Similarity=0.107 Sum_probs=90.9
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC--CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~--~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
++...||+..+. ..++ ..|.+.+++.+ +..+ ..++.....+|-+.|++.++ .+.+.++++++|+.+.+++..
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~AlrlA 150 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLRWA 150 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHH
Confidence 456678876553 2232 34778887765 4332 23344445667788887775 578999999999999988753
Q ss_pred c--CCCCeEEEcCCCChhHHHHH--HHCCCEEE------Eec--CC-----CCCCCCHHHHHHhhccCCceEEEEcCCCC
Q 025730 167 L--DPGDKIVDCPPTFTMYEFDA--AVNGAAVV------KVP--RK-----SDFSLNVELIADAVEREKPKCIFLTSPNN 229 (249)
Q Consensus 167 ~--~pGd~Vlv~~P~y~~~~~~~--~~~G~~v~------~v~--~~-----~~~~id~e~l~~~i~~~~~k~i~l~~PnN 229 (249)
- ...++|+...-.|..+.... ...+.+.. .++ .. ..| -|++.+++.+...++.+|++.--..
T Consensus 151 R~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~vAavi~EPi~g 229 (453)
T PRK07046 151 RAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDVAAVLAEPAMT 229 (453)
T ss_pred HHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCeEEEEECCCCC
Confidence 2 22378888888786542211 11111000 000 00 011 2789999988644566666542233
Q ss_pred ccccCCChH---HHHHHHhhhhC
Q 025730 230 PDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 230 PTG~~~~~~---e~i~~i~~~~~ 249 (249)
-.|.+.++. +.+.++|++||
T Consensus 230 ~~G~~~p~~~fl~~lr~lc~~~g 252 (453)
T PRK07046 230 NIGMVLPEPGFHEALRELTRRYG 252 (453)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhC
Confidence 346665554 55788999986
No 326
>PRK07482 hypothetical protein; Provisional
Probab=96.34 E-value=0.11 Score=48.93 Aligned_cols=157 Identities=12% Similarity=0.080 Sum_probs=89.7
Q ss_pred CCCCeeeccCCCC--CCC-CCHHHHHHHHh-ccCC---C---CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~~--~~~-~p~~v~~al~~-~~~~---~---~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
.++..||+..+-- .++ ..|.+.+++.+ ++.. . .|+.....+|-+.|++...-.-+.++++++++++++.+
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~A 127 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQ 127 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHH
Confidence 4567888877732 222 45778888765 3322 1 23333345666777766643346899999999999999
Q ss_pred HHHhc------C-CC-CeEEEcCCCChhHHHHHHH-CC------------CEEEEecCCCCCC-------------CCHH
Q 025730 163 MRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-------------LNVE 208 (249)
Q Consensus 163 ~~~~~------~-pG-d~Vlv~~P~y~~~~~~~~~-~G------------~~v~~v~~~~~~~-------------id~e 208 (249)
++... . +| .+|+...-+|......+.. .| ..+..++....+. .+++
T Consensus 128 lKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 207 (461)
T PRK07482 128 IKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCAD 207 (461)
T ss_pred HHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHH
Confidence 88542 1 22 5788888878653322111 11 0112222111100 1457
Q ss_pred HHHHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 209 LIADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 209 ~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.+++.+.+ .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 208 ~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~g 254 (461)
T PRK07482 208 ELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYD 254 (461)
T ss_pred HHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 77777742 3456666553344457775555 45788999986
No 327
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=96.34 E-value=0.079 Score=49.83 Aligned_cols=157 Identities=14% Similarity=0.136 Sum_probs=90.2
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCC---CC-CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP---YI-YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~---~~-Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...+|+..+ ...++ ..|.+.+++.+ +... .+ ++.+...+|-+.|++.+.-..+.++++++++++.+.+++
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~Alk 159 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALK 159 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHH
Confidence 45667888776 34443 45788888765 3321 22 234445567777777664334689999999999999988
Q ss_pred Hhc----CCC-CeEEEcCCCChhHHHHHH-HCCCEEEE---ecCCCCC----CCCHHHHHHhhcc-----CCceEEEEcC
Q 025730 165 CVL----DPG-DKIVDCPPTFTMYEFDAA-VNGAAVVK---VPRKSDF----SLNVELIADAVER-----EKPKCIFLTS 226 (249)
Q Consensus 165 ~~~----~pG-d~Vlv~~P~y~~~~~~~~-~~G~~v~~---v~~~~~~----~id~e~l~~~i~~-----~~~k~i~l~~ 226 (249)
... ..| .+|+...-.|......+. ..|-.... .|...++ -.|.+.+++.+++ .++.+|++.-
T Consensus 160 lAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEp 239 (459)
T PRK11522 160 LAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEP 239 (459)
T ss_pred HHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEec
Confidence 532 123 468888877764433222 22211110 1110010 1267788877752 2345555554
Q ss_pred CCCccccCCChH---HHHHHHhhhhC
Q 025730 227 PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
...-.|.+.++. +.+.++|++||
T Consensus 240 v~g~~G~~~pp~~yl~~lr~lc~~~g 265 (459)
T PRK11522 240 IQGEGGVILPPEGYLTAVRKLCDEFG 265 (459)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 444567776655 45788999886
No 328
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.24 E-value=0.12 Score=48.54 Aligned_cols=157 Identities=11% Similarity=0.093 Sum_probs=90.7
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCC-----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+ ...++ ..|.+.+++.+ +... ..|+.....+|-+.|++..+..-+.++++++++++.+.++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~Al 131 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIAL 131 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHH
Confidence 45667888766 33333 45777777765 3221 1234334556777777766533358999999999999998
Q ss_pred HHhc-------CCC-CeEEEcCCCChhHHHHHH-HCCC------------EEEEecCCCCCC------------CCHHHH
Q 025730 164 RCVL-------DPG-DKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKSDFS------------LNVELI 210 (249)
Q Consensus 164 ~~~~-------~pG-d~Vlv~~P~y~~~~~~~~-~~G~------------~v~~v~~~~~~~------------id~e~l 210 (249)
+... .+| .+|+...-+|......+. ..|- .+..++...... -+++.+
T Consensus 132 KlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (453)
T PRK06943 132 KMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADV 211 (453)
T ss_pred HHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHH
Confidence 8641 123 678888888864332111 1110 122233211110 124667
Q ss_pred HHhhcc--CCceEEEEcC-CCCccccCCChH---HHHHHHhhhhC
Q 025730 211 ADAVER--EKPKCIFLTS-PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 211 ~~~i~~--~~~k~i~l~~-PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++.+++ .++.+|++.- ...-.|.+.++. +.+.++|++||
T Consensus 212 ~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~g 256 (453)
T PRK06943 212 RRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYG 256 (453)
T ss_pred HHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcC
Confidence 776642 3556666553 256668766665 44788999986
No 329
>PRK05965 hypothetical protein; Provisional
Probab=96.23 E-value=0.11 Score=48.71 Aligned_cols=157 Identities=13% Similarity=0.144 Sum_probs=90.1
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC---C---CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~---~---~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
.+...||+..+- ..++ ..|.+.+++.+ +... . .|+.....+|-+.|++.+.-..+.++++++++++.+.+
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~A 123 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSA 123 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHH
Confidence 456778887662 2222 35778888765 3321 1 23333345677777776643446899999999999999
Q ss_pred HHHhc------C-CC-CeEEEcCCCChhHHHHH-HHCCC------------EEEEecCCCC----CCCC--------HHH
Q 025730 163 MRCVL------D-PG-DKIVDCPPTFTMYEFDA-AVNGA------------AVVKVPRKSD----FSLN--------VEL 209 (249)
Q Consensus 163 ~~~~~------~-pG-d~Vlv~~P~y~~~~~~~-~~~G~------------~v~~v~~~~~----~~id--------~e~ 209 (249)
++... . +| .+|+...-+|......+ ...|. .+..++.... +.-| ++.
T Consensus 124 lKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (459)
T PRK05965 124 VRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAA 203 (459)
T ss_pred HHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHH
Confidence 87532 1 22 57888888886443221 11111 1122321110 1123 256
Q ss_pred HHHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 210 IADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 210 l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++.+++ .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 204 l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~g 249 (459)
T PRK05965 204 LRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELG 249 (459)
T ss_pred HHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcC
Confidence 7776652 3456666554455567776666 44788999986
No 330
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.16 E-value=0.044 Score=49.43 Aligned_cols=124 Identities=15% Similarity=0.183 Sum_probs=85.0
Q ss_pred CCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCC-----CCeEEEcCCCC-hhHHHHHHHCCCEEEE
Q 025730 124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP-----GDKIVDCPPTF-TMYEFDAAVNGAAVVK 196 (249)
Q Consensus 124 ~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~p-----Gd~Vlv~~P~y-~~~~~~~~~~G~~v~~ 196 (249)
--| .+.+...|.+++.+.+|. +.++.|.-+..+=++++..++++ |.+..+++..| .......+.+|+.+..
T Consensus 73 EAYagsrs~~~L~~avkdifGf--q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n 150 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIFGF--QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRN 150 (471)
T ss_pred hhhcccccHHHHHHHHHHhcCc--eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCcccc
Confidence 346 445688999999999995 56777776666666666666554 44444454444 5666677779998887
Q ss_pred ecCCC----------CCCCCHHHHHHhhcc---CCceEEEEcCCCC-ccccCCChH--HHHHHHhhhhC
Q 025730 197 VPRKS----------DFSLNVELIADAVER---EKPKCIFLTSPNN-PDGRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 197 v~~~~----------~~~id~e~l~~~i~~---~~~k~i~l~~PnN-PTG~~~~~~--e~i~~i~~~~~ 249 (249)
++.++ .+.+|+++|++.+++ .++-.|+++--|| -.|+-.+.. +.+.+||++|+
T Consensus 151 ~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ 219 (471)
T COG3033 151 VYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYD 219 (471)
T ss_pred ccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcC
Confidence 76321 257899999999975 3455666664455 446665555 66888999885
No 331
>PRK12403 putative aminotransferase; Provisional
Probab=95.99 E-value=0.24 Score=46.57 Aligned_cols=157 Identities=12% Similarity=0.112 Sum_probs=85.0
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC---CCC---CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---YIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~---~~Y---p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
++...||+..+- ..++ ..|.+.+++.+ ++.. ..+ +.....+|.+.|+++++-..+.++++++++++.+.+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~A 131 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVL 131 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHH
Confidence 456678876552 1232 44778887765 3321 111 222345678888887764346899999999999999
Q ss_pred HHHhc-------CCCCe-EEEcCCCChhHHH-HHHHCCCE-----------EEEecCCCCC----CC--------CHHHH
Q 025730 163 MRCVL-------DPGDK-IVDCPPTFTMYEF-DAAVNGAA-----------VVKVPRKSDF----SL--------NVELI 210 (249)
Q Consensus 163 ~~~~~-------~pGd~-Vlv~~P~y~~~~~-~~~~~G~~-----------v~~v~~~~~~----~i--------d~e~l 210 (249)
++... ++++. |+...-+|..... .....|.. +..+|....+ .+ +.+.+
T Consensus 132 iklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (460)
T PRK12403 132 IRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQL 211 (460)
T ss_pred HHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 88653 23333 4455556654322 22222221 2233311110 11 13455
Q ss_pred HHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 211 ADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 211 ~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++.+.+ .++.+|++.--..-.|.+.++. +.+.++|++||
T Consensus 212 e~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g 256 (460)
T PRK12403 212 EEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYD 256 (460)
T ss_pred HHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 555521 2345555543344457765554 55888999986
No 332
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=95.98 E-value=0.25 Score=46.71 Aligned_cols=150 Identities=14% Similarity=0.111 Sum_probs=87.0
Q ss_pred CCCeeeccCCCC--CCC-CCHHHHHHHHh-ccCCCCC--CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 025730 94 PEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (249)
Q Consensus 94 ~~~~I~L~~~~~--~~~-~p~~v~~al~~-~~~~~~Y--p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~ 167 (249)
+...||+..+-. .++ ..|.+.+++.+ +.....| +.....+|-+.|++.+.- .+.+.++++++|+.+.+++...
T Consensus 98 G~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~AlklAR 176 (474)
T PLN02482 98 GNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLRLAR 176 (474)
T ss_pred CCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHHHHH
Confidence 456677765532 222 45778888775 4433333 333344566666666542 4789999999999999887532
Q ss_pred --CCCCeEEEcCCCChhHHHH--HHH-CCC-----------------EEEEecCCCCCCCCHHHHHHhhcc--CCceEEE
Q 025730 168 --DPGDKIVDCPPTFTMYEFD--AAV-NGA-----------------AVVKVPRKSDFSLNVELIADAVER--EKPKCIF 223 (249)
Q Consensus 168 --~pGd~Vlv~~P~y~~~~~~--~~~-~G~-----------------~v~~v~~~~~~~id~e~l~~~i~~--~~~k~i~ 223 (249)
...++|+...-+|..+... ... .|. .++.++. -|++.+++.+++ .++.+|+
T Consensus 177 ~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~iAavI 251 (474)
T PLN02482 177 AYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGEIAAVI 251 (474)
T ss_pred HhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCceEEEE
Confidence 1236788877777654321 111 010 0111111 168888888853 2355555
Q ss_pred EcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 224 LTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 224 l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+.-...-.|.+.++. +.+.++|++||
T Consensus 252 ~Epv~g~~G~i~p~~~fl~~lr~lc~~~g 280 (474)
T PLN02482 252 LEPVVGNSGFIVPKKEFLEGLREITKENG 280 (474)
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 443344467765554 35788999886
No 333
>PRK06062 hypothetical protein; Provisional
Probab=95.95 E-value=0.28 Score=46.02 Aligned_cols=157 Identities=12% Similarity=0.121 Sum_probs=89.9
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...||+..+- ..++ ..|.+.+++.+ +... ..|..+...+|-+.|++...-..+.|+++++++++.+.+++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~Alk 130 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVR 130 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHH
Confidence 466788887763 3332 45677777765 3321 22333334567777777664334689999999999999988
Q ss_pred Hhc-CCC-CeEEEcCCCChhHHHHHHH-CCC-----------EEEEecCCCCCC------CC-------HHHHHHhhcc-
Q 025730 165 CVL-DPG-DKIVDCPPTFTMYEFDAAV-NGA-----------AVVKVPRKSDFS------LN-------VELIADAVER- 216 (249)
Q Consensus 165 ~~~-~pG-d~Vlv~~P~y~~~~~~~~~-~G~-----------~v~~v~~~~~~~------id-------~e~l~~~i~~- 216 (249)
... -.| .+|+...-.|......+.. .|. .+..++....+. -| ++.+++.++.
T Consensus 131 lAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 210 (451)
T PRK06062 131 MARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE 210 (451)
T ss_pred HHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc
Confidence 532 123 6788888777644322221 111 112222111111 12 5677777742
Q ss_pred --CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 217 --EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 217 --~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.++.+|++.--..--|.+.++. +.+.++|++||
T Consensus 211 ~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g 248 (451)
T PRK06062 211 GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHG 248 (451)
T ss_pred CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 3455666554344457775555 55788999886
No 334
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=95.85 E-value=0.26 Score=46.06 Aligned_cols=157 Identities=13% Similarity=0.193 Sum_probs=84.4
Q ss_pred CCCCeeeccCCC--CCC-CCCHHHHHHHHh-ccCC---C--CCCCcChHHHHHHHHHHcCCC--CCC-EEEeCCHHHHHH
Q 025730 93 KPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLE--SDH-ILVGCGADELID 160 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~-~~p~~v~~al~~-~~~~---~--~Yp~~g~~~lr~~la~~~~~~--~~~-I~vt~Ga~~~l~ 160 (249)
.+...||+..+. ..+ -..|.+.+++.+ +... + .|+.+...+|-+.|++.+.-. ... ++++++++|+.+
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e 116 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVE 116 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHH
Confidence 456778887763 222 245778888765 3321 1 134333456667777766421 124 455689999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCChhHHHHHHH-CC------------CEEEEecCCCCCCC--------CH----HHHHHh
Q 025730 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSL--------NV----ELIADA 213 (249)
Q Consensus 161 ~~~~~~~--~pGd~Vlv~~P~y~~~~~~~~~-~G------------~~v~~v~~~~~~~i--------d~----e~l~~~ 213 (249)
.+++... ....+|+...-.|......+.. .| ..+..++..+.+.. +. +.+++.
T Consensus 117 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (442)
T TIGR00709 117 AAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENF 196 (442)
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHH
Confidence 9887532 2236788888888644433322 22 11233332211111 11 123333
Q ss_pred hcc-----CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 214 VER-----EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 214 i~~-----~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++. .++.+|++....+..|.+.++. +.+.++|++||
T Consensus 197 ~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g 240 (442)
T TIGR00709 197 IEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHD 240 (442)
T ss_pred HHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 321 3566777665555556554444 44788999986
No 335
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.80 E-value=0.22 Score=46.83 Aligned_cols=157 Identities=12% Similarity=0.167 Sum_probs=89.9
Q ss_pred CCCCeeeccCCC--CCC-CCCHHHHHHHHh-ccC---CC--CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~-~~p~~v~~al~~-~~~---~~--~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+- ..+ -..|.+.+++.+ +.. .. .++.....+|-+.|++.+.-..+.++++++++++.+.++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~Al 133 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAI 133 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHH
Confidence 456678886652 222 245677777765 332 11 233333556777777776533468999999999999988
Q ss_pred HHhc-------CCC-CeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCC----CC--------CCHHHH
Q 025730 164 RCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVELI 210 (249)
Q Consensus 164 ~~~~-------~pG-d~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~----~~--------id~e~l 210 (249)
+... .+| .+|+...-+|......+.. .|. .+..+|.... +. -+++.+
T Consensus 134 klAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 213 (460)
T PRK06916 134 KMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL 213 (460)
T ss_pred HHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 8542 233 6788888888653332222 121 1223331110 11 135666
Q ss_pred HHhhcc--CCceEEEEcC-CCCccccCCChH---HHHHHHhhhhC
Q 025730 211 ADAVER--EKPKCIFLTS-PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 211 ~~~i~~--~~~k~i~l~~-PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++.+++ .++.+|++.- ...-.|.+.++. +.+.++|++||
T Consensus 214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g 258 (460)
T PRK06916 214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYN 258 (460)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 666642 3455666543 255567776555 44788999886
No 336
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=95.75 E-value=0.34 Score=45.55 Aligned_cols=156 Identities=17% Similarity=0.224 Sum_probs=88.4
Q ss_pred CCCCeeeccCC-CCCCC-CCHHHHHHHHh-ccCC----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHH
Q 025730 93 KPEDIVKIDAN-ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (249)
Q Consensus 93 ~~~~~I~L~~~-~~~~~-~p~~v~~al~~-~~~~----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~ 165 (249)
.+...||+..+ ...++ ..|.+.+++.+ +... .+|+.....+|.+.|+++++-..+.++++++++++.+.+++.
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Alkl 149 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKL 149 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHH
Confidence 45667888633 22344 56788888765 3221 234444456788888887753346899999999999998875
Q ss_pred hc--CCCCeEEEcCCCChhHHHHHH-HCCC------------EEEEecCCCC----CC-C------CHHHHHHhhcc-CC
Q 025730 166 VL--DPGDKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKSD----FS-L------NVELIADAVER-EK 218 (249)
Q Consensus 166 ~~--~pGd~Vlv~~P~y~~~~~~~~-~~G~------------~v~~v~~~~~----~~-i------d~e~l~~~i~~-~~ 218 (249)
.. ....+|+...-.|......+. ..|. .+..++.... +. . +++.+++.+++ .+
T Consensus 150 Ar~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~ 229 (459)
T PRK06082 150 ARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGG 229 (459)
T ss_pred HHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCC
Confidence 32 223678888877764332222 2221 1222331111 10 1 13557777652 24
Q ss_pred ceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 219 PKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 219 ~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+.+|++.-..+- |.++++. +.+.++|++||
T Consensus 230 vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g 262 (459)
T PRK06082 230 IGAFIAEAVRNT-DVQVPSKAYWKRVREICDKHN 262 (459)
T ss_pred EEEEEECCccCC-CCcCCCHHHHHHHHHHHHHcC
Confidence 555554433333 5544553 56888999986
No 337
>PRK06105 aminotransferase; Provisional
Probab=95.60 E-value=0.34 Score=45.60 Aligned_cols=157 Identities=10% Similarity=0.077 Sum_probs=87.9
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC---C---CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~---~---~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
.+...||+..+. ..++ .+|.+.+++.+ +... . .|......+|-+.|++.+.-+-+.++++++++++.+.+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~A 125 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTV 125 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHH
Confidence 456788987763 3332 45778888775 3321 1 23323345677777777653346899999999999999
Q ss_pred HHHhc------C-CC-CeEEEcCCCChhHHHHH-HHCCC------------EEEEecCCCCCCC-------------CHH
Q 025730 163 MRCVL------D-PG-DKIVDCPPTFTMYEFDA-AVNGA------------AVVKVPRKSDFSL-------------NVE 208 (249)
Q Consensus 163 ~~~~~------~-pG-d~Vlv~~P~y~~~~~~~-~~~G~------------~v~~v~~~~~~~i-------------d~e 208 (249)
++... . +| .+|+...-.|......+ ...|. .+..++....+.. .++
T Consensus 126 lKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 205 (460)
T PRK06105 126 VKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLAN 205 (460)
T ss_pred HHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHH
Confidence 88632 1 23 57887777775433221 11111 1122221111111 135
Q ss_pred HHHHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 209 LIADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 209 ~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++++.+.. .++.+|++.--..-.|.+.++. +.+.++|++||
T Consensus 206 ~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~ 252 (460)
T PRK06105 206 ELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYD 252 (460)
T ss_pred HHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 66666631 3455666544355557665554 45788999986
No 338
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.59 E-value=0.27 Score=46.29 Aligned_cols=157 Identities=9% Similarity=0.172 Sum_probs=88.6
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC---C--CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~---~--~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+- ..++ ..|.+.+++.+ +... . .|......+|-+.|++......+.++++++++++.+.++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~Al 124 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVAL 124 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHH
Confidence 356678886662 2222 34677777765 3321 1 233333456777777766433468999999999999998
Q ss_pred HHhc-------CCC-CeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCCC----CC--------CHHHH
Q 025730 164 RCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVELI 210 (249)
Q Consensus 164 ~~~~-------~pG-d~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~~----~i--------d~e~l 210 (249)
+... .+| .+|+...-+|......+.. .|. .+..+|....+ +. +++.+
T Consensus 125 KlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~l 204 (466)
T PRK07030 125 KMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHM 204 (466)
T ss_pred HHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHH
Confidence 8541 123 5788888888644332222 121 12333321111 11 24566
Q ss_pred HHhhcc--CCceEEEEcC-CCCccccCCChH---HHHHHHhhhhC
Q 025730 211 ADAVER--EKPKCIFLTS-PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 211 ~~~i~~--~~~k~i~l~~-PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++.+.+ .++.+|++.- ...-.|...++. +.+.++|++||
T Consensus 205 e~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g 249 (466)
T PRK07030 205 EQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYG 249 (466)
T ss_pred HHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcC
Confidence 776642 3455665443 245557766655 45788999886
No 339
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=95.58 E-value=0.45 Score=44.49 Aligned_cols=157 Identities=16% Similarity=0.193 Sum_probs=87.6
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccC---CC--CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~---~~--~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+. ..++ ..|.+.+++.+ +.. .. .++.+...+|-+.|++.+.-..+.+.++++++++.+.++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Al 123 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTAL 123 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHH
Confidence 456678887662 2232 45778877765 322 11 223333456677777766423468999999999999888
Q ss_pred HHhcC-------C-CCeEEEcCCCChhHHHHHH-HCC------------CEEEEecCCCC-----CCC--------CHHH
Q 025730 164 RCVLD-------P-GDKIVDCPPTFTMYEFDAA-VNG------------AAVVKVPRKSD-----FSL--------NVEL 209 (249)
Q Consensus 164 ~~~~~-------p-Gd~Vlv~~P~y~~~~~~~~-~~G------------~~v~~v~~~~~-----~~i--------d~e~ 209 (249)
+.... + ..+|+...-.|......+. ..| ..+..+|...+ +.. ..+.
T Consensus 124 klAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (442)
T PRK13360 124 KIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADE 203 (442)
T ss_pred HHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHH
Confidence 74321 2 2578888888865432211 111 11233332111 111 1456
Q ss_pred HHHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 210 IADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 210 l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++.+.. .++.+|++.-...-.|...++. +.+.++|++||
T Consensus 204 le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g 249 (442)
T PRK13360 204 LERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHG 249 (442)
T ss_pred HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 7777642 3344555444344557665544 55788999886
No 340
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=95.55 E-value=0.51 Score=43.65 Aligned_cols=157 Identities=12% Similarity=0.175 Sum_probs=87.5
Q ss_pred CCCCeeeccCCC--CCC-CCCHHHHHHHHh-ccC-CCC----CCCcChHHHHHHHHHHcCCC--C-CCEEE-eCCHHHHH
Q 025730 93 KPEDIVKIDANE--NPY-GPPPEVREALGQ-LKF-PYI----YPDPESRRLRAALAKDSGLE--S-DHILV-GCGADELI 159 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~-~~p~~v~~al~~-~~~-~~~----Yp~~g~~~lr~~la~~~~~~--~-~~I~v-t~Ga~~~l 159 (249)
++...||+..+- ..+ -..|.+.+++.+ +.. ... +......+|-+.|++.+..+ . +.+++ +++++++.
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~ 112 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAV 112 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHH
Confidence 456778887663 223 246788888875 432 111 11122344555665553111 1 24655 58999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCChhHHHHHHH-CC------------CEEEEecCCCCCC---CCHHHHHHhhcc-----
Q 025730 160 DLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS---LNVELIADAVER----- 216 (249)
Q Consensus 160 ~~~~~~~~--~pGd~Vlv~~P~y~~~~~~~~~-~G------------~~v~~v~~~~~~~---id~e~l~~~i~~----- 216 (249)
+.+++... ....+|+...-+|......+.. .| ..+..+|..+... -+++.+++.+++
T Consensus 113 e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~ 192 (412)
T TIGR02407 113 ESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGV 192 (412)
T ss_pred HHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCC
Confidence 98887542 2236788888888644332221 11 1223344221111 246777877753
Q ss_pred CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 217 EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 217 ~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.++.+|++.--.+..|.+..+. +.+.++|++||
T Consensus 193 ~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g 228 (412)
T TIGR02407 193 DLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHD 228 (412)
T ss_pred CceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 2456676655577889865555 44788899886
No 341
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=95.48 E-value=0.57 Score=43.46 Aligned_cols=157 Identities=11% Similarity=0.078 Sum_probs=88.7
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCCC--C---CCCcChHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY--I---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~~--~---Yp~~g~~~lr~~la~~~~~-~~~~I~vt~Ga~~~l~~~ 162 (249)
.+...+|+..+. ..++ ..|.+.+++.+ +.... . ++.+...+|-+.+++.... ..+.++++++++++.+.+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~A 117 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENA 117 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHH
Confidence 456678887663 2232 35677777765 33211 1 2333345666777776542 246899999999999988
Q ss_pred HHHhc--CCCCeEEEcCCCChhHHHHHHH-CCCE-------------EEEecCCC-CC----CCCHHHHHHhhcc----C
Q 025730 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRKS-DF----SLNVELIADAVER----E 217 (249)
Q Consensus 163 ~~~~~--~pGd~Vlv~~P~y~~~~~~~~~-~G~~-------------v~~v~~~~-~~----~id~e~l~~~i~~----~ 217 (249)
++... ....+|+...-+|......+.. .|.. +..++..+ .. ..+++.+++.+++ .
T Consensus 118 lklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~ 197 (421)
T PRK06777 118 VKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPD 197 (421)
T ss_pred HHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCC
Confidence 87432 1235788888888644333221 2210 12222111 11 1235667776642 3
Q ss_pred CceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 218 KPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 218 ~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++.+|++.-..+..|....+. +.+.++|++||
T Consensus 198 ~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g 232 (421)
T PRK06777 198 QVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHG 232 (421)
T ss_pred ceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 466676655567788654443 44788899886
No 342
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=95.44 E-value=0.36 Score=45.16 Aligned_cols=157 Identities=17% Similarity=0.197 Sum_probs=88.4
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccC---C--CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+- ..++ ..|.+.+++.+ +.. . ..|..+...+|-+.|++.+.-..+.|.++++++++.+.++
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Al 126 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTAL 126 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHH
Confidence 456788887662 2333 45777777765 322 1 1233333456777777766433468999999999999988
Q ss_pred HHhc------C-C-CCeEEEcCCCChhHHHHHHH-CC------------CEEEEecCCC-C----CCC--------CHHH
Q 025730 164 RCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKS-D----FSL--------NVEL 209 (249)
Q Consensus 164 ~~~~------~-p-Gd~Vlv~~P~y~~~~~~~~~-~G------------~~v~~v~~~~-~----~~i--------d~e~ 209 (249)
+... . + ..+|+...-.|......+.. .| ..+..++... . +.. ..++
T Consensus 127 klAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
T PRK09221 127 KIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADD 206 (445)
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHH
Confidence 7532 1 2 25788888888643322111 11 1122233211 0 111 1356
Q ss_pred HHHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 210 IADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 210 l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++.++. .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 207 l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g 252 (445)
T PRK09221 207 LERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHG 252 (445)
T ss_pred HHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 6666642 3455666554455567776554 55788999886
No 343
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.44 E-value=0.29 Score=46.17 Aligned_cols=157 Identities=8% Similarity=0.115 Sum_probs=89.3
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-cc---CCC--CCCCcChHHHHHHHHHHcCC-----CCCCEEEeCCHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGL-----ESDHILVGCGADEL 158 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~---~~~--~Yp~~g~~~lr~~la~~~~~-----~~~~I~vt~Ga~~~ 158 (249)
++...||+..+ ...++ ..|.+.+++.+ +. ... .|+.....+|-+.|++.+.- +.+.++++++++++
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEA 141 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAG 141 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHH
Confidence 45667888766 33332 45677777765 32 211 23333345666777766532 23589999999999
Q ss_pred HHHHHHHhcC-------CC-CeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCCC----CC--------
Q 025730 159 IDLIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL-------- 205 (249)
Q Consensus 159 l~~~~~~~~~-------pG-d~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~~----~i-------- 205 (249)
.+.+++.... +| .+|+...-+|......+.. .|. .+..+|..+.+ +.
T Consensus 142 vE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 221 (472)
T PRK08742 142 VEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQ 221 (472)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHH
Confidence 9998875421 22 6788888888644332222 111 12233321111 11
Q ss_pred CHHHHHHhhcc--CCceEEEEcC-CCCccccCCChH---HHHHHHhhhhC
Q 025730 206 NVELIADAVER--EKPKCIFLTS-PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 206 d~e~l~~~i~~--~~~k~i~l~~-PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++.+++.+.+ .++.+|++.- ...-.|.+.++. +.+.++|++||
T Consensus 222 ~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~g 271 (472)
T PRK08742 222 AADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHG 271 (472)
T ss_pred HHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcC
Confidence 25666776642 3455665443 255668766665 44788999986
No 344
>PRK07480 putative aminotransferase; Validated
Probab=95.44 E-value=0.29 Score=45.96 Aligned_cols=157 Identities=15% Similarity=0.170 Sum_probs=87.2
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC------CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP------YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~------~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
.+...||+..+. ..++ ..|.+.+++.+ +... ..|+.+...+|-+.|++.+.-.-+.++++++++++.+.+
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~A 127 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTV 127 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHH
Confidence 456678887652 2232 35778777765 3321 123333456677777777653346899999999999998
Q ss_pred HHHhcC-------CC-CeEEEcCCCChhHHHHH-HHCCCE------------EEEecCCCCC----CCC--------HHH
Q 025730 163 MRCVLD-------PG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDF----SLN--------VEL 209 (249)
Q Consensus 163 ~~~~~~-------pG-d~Vlv~~P~y~~~~~~~-~~~G~~------------v~~v~~~~~~----~id--------~e~ 209 (249)
++.... +| .+|+...-+|......+ ...|.. +..++....+ ..+ ++.
T Consensus 128 lklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 207 (456)
T PRK07480 128 LRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQ 207 (456)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHH
Confidence 875421 33 46887777775432211 111111 1122211100 011 255
Q ss_pred HHHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 210 IADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 210 l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++.+.+ .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 208 l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g 253 (456)
T PRK07480 208 LEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYD 253 (456)
T ss_pred HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 5554421 3456666654444467766665 45788999986
No 345
>PRK07678 aminotransferase; Validated
Probab=95.39 E-value=0.54 Score=44.07 Aligned_cols=156 Identities=15% Similarity=0.129 Sum_probs=87.9
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
.+...||+..+- ..++ ..|.+.+++.+ +... ..|+.....+|-+.|++.++. .+.++++++++++.+.+++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e~Alk 123 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETAFK 123 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHHHHHH
Confidence 456678886652 2232 35777777765 3321 123433456677888877754 2579999999999998887
Q ss_pred HhcC-------CC-CeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCCCCC---------C---HHHHH
Q 025730 165 CVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL---------N---VELIA 211 (249)
Q Consensus 165 ~~~~-------pG-d~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~~~i---------d---~e~l~ 211 (249)
.... +| .+|+...-.|......+.. .|. .+..++..+.+.. | ++.++
T Consensus 124 lAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 203 (451)
T PRK07678 124 IARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEID 203 (451)
T ss_pred HHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHH
Confidence 5421 23 5788888887644332221 111 1222332111111 1 22355
Q ss_pred Hhhc---cCCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 212 DAVE---REKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 212 ~~i~---~~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+.++ ..++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 204 ~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g 247 (451)
T PRK07678 204 RVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHG 247 (451)
T ss_pred HHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 5553 23566666553344467776665 45788999986
No 346
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=95.34 E-value=0.35 Score=45.19 Aligned_cols=157 Identities=10% Similarity=0.048 Sum_probs=89.4
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC--CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~--~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
++...||+..+- ..++ ..|.+.+++.+ +... ..++.....+|-+.|.+.++...+.+.++++++|+.+.+++..
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklA 130 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLA 130 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHH
Confidence 456678887663 2333 45788888765 3322 2234444566777777777543468999999999999998854
Q ss_pred c-CCC-CeEEEcCCCChhHHH---HH-HHCCCEEEEe------c-CCCC---C-CCCHHHHHHhhcc--CCceEEEEcCC
Q 025730 167 L-DPG-DKIVDCPPTFTMYEF---DA-AVNGAAVVKV------P-RKSD---F-SLNVELIADAVER--EKPKCIFLTSP 227 (249)
Q Consensus 167 ~-~pG-d~Vlv~~P~y~~~~~---~~-~~~G~~v~~v------~-~~~~---~-~id~e~l~~~i~~--~~~k~i~l~~P 227 (249)
. -.| .+|+...-+|..+.. .. ...+.....+ + .... + .-|++.+++.+.+ .++.+|++.-.
T Consensus 131 r~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv 210 (433)
T PRK00615 131 RGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPI 210 (433)
T ss_pred HHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCC
Confidence 2 123 578877777765431 11 1111000000 0 0000 0 1267888888753 23455554433
Q ss_pred CCccccCCChH---HHHHHHhhhhC
Q 025730 228 NNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 228 nNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
..-.|...++. +.+..+|++||
T Consensus 211 ~~~~G~~~p~~~yl~~l~~lc~~~g 235 (433)
T PRK00615 211 CANMGVVLPKPGFIEGIIQTCRRTG 235 (433)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHcC
Confidence 34457665554 45788999986
No 347
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=95.33 E-value=0.78 Score=42.47 Aligned_cols=157 Identities=10% Similarity=0.062 Sum_probs=88.1
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC--CC---CCCcChHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~--~~---Yp~~g~~~lr~~la~~~~~-~~~~I~vt~Ga~~~l~~~ 162 (249)
++...||+..+. ..++ ..+.+.+++.+ +... .. ++.+...+|-+.|++...- ..+.++++++++++++.+
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~A 110 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENA 110 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHH
Confidence 456678887763 2222 45778888765 3321 11 2223345677777776642 235799999999999988
Q ss_pred HHHhc--CCCCeEEEcCCCChhHHHHHHH-CCC-------------EEEEecCCCCCC-------C----CHHHHHHhhc
Q 025730 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS-------L----NVELIADAVE 215 (249)
Q Consensus 163 ~~~~~--~pGd~Vlv~~P~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~-------i----d~e~l~~~i~ 215 (249)
++... ....+|+...-+|......+.. .|. .+..++....+. . +++.+++.+.
T Consensus 111 lklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (420)
T TIGR00700 111 VKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFV 190 (420)
T ss_pred HHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHH
Confidence 87432 2235788888888643322221 111 122233211110 1 2456666552
Q ss_pred ----cCCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 216 ----REKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 216 ----~~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
..++.+|++.--..-+|.++++. +.+.++|++||
T Consensus 191 ~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g 231 (420)
T TIGR00700 191 IDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHG 231 (420)
T ss_pred hhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 13456666554455578876665 44788999886
No 348
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=95.19 E-value=1 Score=42.39 Aligned_cols=157 Identities=15% Similarity=0.205 Sum_probs=88.6
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC----CCC-CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~----~~Y-p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+. ..++ ..|.+.+++.+ +... ..| +.+...+|-+.|++..+...+.+.++++++|+.+.++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~Al 130 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAI 130 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHH
Confidence 456788887763 2332 45678877765 3321 122 2233456777777776543468999999999999998
Q ss_pred HHhc--CCCCeEEEcCCCChhHHHHHH-HCCC-------------EEEEecCCCCCC--------CCH--------HHHH
Q 025730 164 RCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA-------------AVVKVPRKSDFS--------LNV--------ELIA 211 (249)
Q Consensus 164 ~~~~--~pGd~Vlv~~P~y~~~~~~~~-~~G~-------------~v~~v~~~~~~~--------id~--------e~l~ 211 (249)
+... ....+|+...-+|......+. ..|. .+..+|..+.+. -|. +.++
T Consensus 131 klAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le 210 (457)
T PRK05639 131 KVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLE 210 (457)
T ss_pred HHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHH
Confidence 7542 223678888887764332221 1111 133344221111 022 2344
Q ss_pred Hhhc-----cCCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 212 DAVE-----REKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 212 ~~i~-----~~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+.+. ..++.+|++.--..-.|.+.++. +.+.++|++||
T Consensus 211 ~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g 256 (457)
T PRK05639 211 NYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHG 256 (457)
T ss_pred HHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 4331 24566666554344567766666 44788899886
No 349
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=95.17 E-value=0.7 Score=44.02 Aligned_cols=157 Identities=11% Similarity=0.095 Sum_probs=86.1
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCCC------CCCCcChHHHHHHHHHHc-CCCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY------IYPDPESRRLRAALAKDS-GLESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~~------~Yp~~g~~~lr~~la~~~-~~~~~~I~vt~Ga~~~l~~ 161 (249)
.+...||+..+ ...++ ..|.+.+++.+ +.... .++.....+|-+.|.+.+ +.+.+.++++++++++.+.
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~ 166 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDT 166 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHH
Confidence 45678898775 23333 45778888765 43211 112222345666666654 2233578999999999999
Q ss_pred HHHHhc-------CCC-CeEEEcCCCChhHHHHH-HHCCCE------------EEEecCCCCCC-------------CCH
Q 025730 162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFS-------------LNV 207 (249)
Q Consensus 162 ~~~~~~-------~pG-d~Vlv~~P~y~~~~~~~-~~~G~~------------v~~v~~~~~~~-------------id~ 207 (249)
+++... .+| .+|+..+-.|......+ ...|.. +..++....+. ...
T Consensus 167 AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 246 (504)
T PLN02760 167 QVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLA 246 (504)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHH
Confidence 988652 133 67888888886543322 222221 11222111111 012
Q ss_pred HHHHHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 208 ELIADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 208 e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++++.+.. .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 247 ~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g 294 (504)
T PLN02760 247 DNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYD 294 (504)
T ss_pred HHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 446665531 2355555444344457765553 66888999986
No 350
>PRK07036 hypothetical protein; Provisional
Probab=95.14 E-value=0.58 Score=44.09 Aligned_cols=157 Identities=13% Similarity=0.154 Sum_probs=86.6
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccC---CCC---CCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~---~~~---Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
++...||+..+. ..++ ..|.+.+++.+ +.. ... ++.....+|-+.|++...-.-+.++++++++++.+.+
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~A 128 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSA 128 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence 456678887663 2232 45778887765 332 111 2322344566666666543346899999999999998
Q ss_pred HHHhc------C-CC-CeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCC----CCCC--------HHH
Q 025730 163 MRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FSLN--------VEL 209 (249)
Q Consensus 163 ~~~~~------~-pG-d~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~----~~id--------~e~ 209 (249)
++... . +| .+|+...-+|......+.. .|. .+..++.... ++.+ ++.
T Consensus 129 lklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 208 (466)
T PRK07036 129 LRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDE 208 (466)
T ss_pred HHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHH
Confidence 88531 1 22 5788888777644322221 111 1233332111 1111 234
Q ss_pred HHHhhcc---CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 210 IADAVER---EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 210 l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++.+.. .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 209 ~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g 254 (466)
T PRK07036 209 FEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYD 254 (466)
T ss_pred HHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcC
Confidence 4454431 3456666554455567776655 55788999986
No 351
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=95.09 E-value=0.67 Score=43.39 Aligned_cols=157 Identities=15% Similarity=0.250 Sum_probs=88.5
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC----C-CCCCcChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~ 162 (249)
.+...||+..+. ..++ ..|.+.+++.+ +... . .|+.+...+|-+.|++.+.-. .+.|+++++++++.+.+
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~A 119 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGI 119 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHH
Confidence 455678886652 2332 45777777765 3321 1 123334566777887776432 25799999999999999
Q ss_pred HHHhc-CCC-CeEEEcCCCChhHHHHHH-HCCC-------------EEEEecCCCCCC-----CC-------HHHHHHhh
Q 025730 163 MRCVL-DPG-DKIVDCPPTFTMYEFDAA-VNGA-------------AVVKVPRKSDFS-----LN-------VELIADAV 214 (249)
Q Consensus 163 ~~~~~-~pG-d~Vlv~~P~y~~~~~~~~-~~G~-------------~v~~v~~~~~~~-----id-------~e~l~~~i 214 (249)
++... -.| .+|+...-.|......+. ..+. .+..+|..+.+. .+ ++.+++.+
T Consensus 120 iklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (445)
T PRK08593 120 IKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMF 199 (445)
T ss_pred HHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHH
Confidence 88431 123 568877777764332221 1221 123344221110 11 24444444
Q ss_pred c----cCCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 215 E----REKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 215 ~----~~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
. ..++.+|++.-.....|.+.++. +.+.++|++||
T Consensus 200 ~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g 241 (445)
T PRK08593 200 EKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHG 241 (445)
T ss_pred HhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 2 14566777666666678775554 45788899886
No 352
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=94.99 E-value=0.59 Score=42.84 Aligned_cols=134 Identities=15% Similarity=0.102 Sum_probs=86.6
Q ss_pred CHHHHHHHHh-ccC---CCCCCCcC--hHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCeEE-----EcC
Q 025730 110 PPEVREALGQ-LKF---PYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV-----DCP 177 (249)
Q Consensus 110 p~~v~~al~~-~~~---~~~Yp~~g--~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vl-----v~~ 177 (249)
.+++++++.. +.. ...|=..+ ..+++......+++. .+.+++++..+.++.++..++..++..|+ ++
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~- 118 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE- 118 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-
Confidence 3566676654 211 12222222 344554444445553 67889999999999999998876544443 33
Q ss_pred CCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC-CCC-ccccCCChHHHHHHHhhhhC
Q 025730 178 PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS-PNN-PDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 178 P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~-PnN-PTG~~~~~~e~i~~i~~~~~ 249 (249)
+........++..|++++.+... ..-...+++.+|. +++++++-++ .|- -+|.+ ..+.+..|++++|
T Consensus 119 gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-e~ta~llkV~s~~~~f~~~l--~~~~l~~ia~~~~ 187 (395)
T COG1921 119 GGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-ENTALLLKVHSSNYGFTGML--SEEELVEIAHEKG 187 (395)
T ss_pred CCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-cCCeeEEEEeeccccccccc--cHHHHHHHHHHcC
Confidence 56678999999999999999742 2357889999998 6888777554 443 22333 3455677888775
No 353
>PRK06149 hypothetical protein; Provisional
Probab=94.96 E-value=0.92 Score=46.72 Aligned_cols=90 Identities=13% Similarity=0.124 Sum_probs=59.9
Q ss_pred CCCCeeeccCCCCCCC-CCHHHHHHHHh-ccC---CCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh-
Q 025730 93 KPEDIVKIDANENPYG-PPPEVREALGQ-LKF---PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV- 166 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~-~p~~v~~al~~-~~~---~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~- 166 (249)
.+...||+..|...++ ..|.+.+++.+ +.. ..+|......+|.+.|++.+.-..+.++++++++++.+.+++..
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr 662 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAW 662 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHH
Confidence 3567889987765565 66888888765 322 12233333567788888877433468999999999999998832
Q ss_pred -cCCCCeEEEcCCCChh
Q 025730 167 -LDPGDKIVDCPPTFTM 182 (249)
Q Consensus 167 -~~pGd~Vlv~~P~y~~ 182 (249)
.....+|+...-.|..
T Consensus 663 ~~tgr~~ii~~~~~yHG 679 (972)
T PRK06149 663 AASGRRDVVSVLEAYHG 679 (972)
T ss_pred HhcCCCeEEEEeCCCCC
Confidence 1223567777777764
No 354
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=94.95 E-value=0.68 Score=43.03 Aligned_cols=156 Identities=10% Similarity=0.156 Sum_probs=87.9
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCC---C--CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~---~--~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+ ...++ ..+.+.+++.+ ++.. . .+......+|.+.|++...-.-+.++++++++++.+.++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~Al 117 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAI 117 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHH
Confidence 45667888765 23332 35677777765 3321 1 122333456777777776433468999999999999888
Q ss_pred HHhcC-------CC-CeEEEcCCCChhHHHHHHH-CCC-------------EEEEecCCCCCCCC-------HHHHHHhh
Q 025730 164 RCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFSLN-------VELIADAV 214 (249)
Q Consensus 164 ~~~~~-------pG-d~Vlv~~P~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~id-------~e~l~~~i 214 (249)
+.... +| .+|+...-+|......+.. .+. ....+|.......+ .+.+++.+
T Consensus 118 klAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 197 (422)
T PRK05630 118 KMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLI 197 (422)
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHH
Confidence 75321 23 5788888888643222211 111 12333321111112 23445555
Q ss_pred ccCCceEEEEcC-CCCccccCCChH---HHHHHHhhhhC
Q 025730 215 EREKPKCIFLTS-PNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 215 ~~~~~k~i~l~~-PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
. .++.+|++.- ...-.|...++. +.+.++|++||
T Consensus 198 ~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g 235 (422)
T PRK05630 198 D-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHD 235 (422)
T ss_pred h-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 4 4666776553 255567776665 44788999886
No 355
>PRK06917 hypothetical protein; Provisional
Probab=94.92 E-value=1 Score=42.26 Aligned_cols=157 Identities=12% Similarity=0.101 Sum_probs=87.8
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC-C----CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-Y----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~-~----~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.++..||+..+- ..++ ..|.+.+++.+ +... + .|......+|-+.|++.+.-..+.++++++++++.+.++
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~Al 108 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAM 108 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHH
Confidence 456678887662 2333 35788887765 3321 1 233333456777777766433457999999999999998
Q ss_pred HHhc-------CCC-CeEEEcCCCChhHHHHHH-HCCC------------EEEEecCCCCC----CC--------CHHHH
Q 025730 164 RCVL-------DPG-DKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKSDF----SL--------NVELI 210 (249)
Q Consensus 164 ~~~~-------~pG-d~Vlv~~P~y~~~~~~~~-~~G~------------~v~~v~~~~~~----~i--------d~e~l 210 (249)
+... .+| .+|+...-.|..+...+. ..|. .+..++....+ .- +++.+
T Consensus 109 klAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 188 (447)
T PRK06917 109 KIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL 188 (447)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHH
Confidence 8541 133 678888888864433222 2221 11122211000 00 24566
Q ss_pred HHhhcc---CCceEEEEcCCC-CccccCCChH---HHHHHHhhhhC
Q 025730 211 ADAVER---EKPKCIFLTSPN-NPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 211 ~~~i~~---~~~k~i~l~~Pn-NPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++.+++ .++.+|++.-.. |--|.+.++. +.+.++|++||
T Consensus 189 e~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g 234 (447)
T PRK06917 189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYD 234 (447)
T ss_pred HHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcC
Confidence 666652 245566654323 3345665555 44788999886
No 356
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=94.87 E-value=1 Score=41.86 Aligned_cols=157 Identities=14% Similarity=0.222 Sum_probs=85.9
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccC-CC----CCCCcChHHHHHHHHHHcCC--CCC-CEEE-eCCHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGL--ESD-HILV-GCGADELI 159 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~-~~----~Yp~~g~~~lr~~la~~~~~--~~~-~I~v-t~Ga~~~l 159 (249)
++...||+..+- ..++ ..|.+.+++.+ +.. .. .+......+|-+.+++.+.. ..+ .+++ +++++++.
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~ 116 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAV 116 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHH
Confidence 456678886663 2232 45788888865 321 11 12222244566666665421 122 4655 58999999
Q ss_pred HHHHHHhc-CCC-CeEEEcCCCChhHHHHHHH-CC------------CEEEEecCCCCC--C-CCHHHHHHhhcc-----
Q 025730 160 DLIMRCVL-DPG-DKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDF--S-LNVELIADAVER----- 216 (249)
Q Consensus 160 ~~~~~~~~-~pG-d~Vlv~~P~y~~~~~~~~~-~G------------~~v~~v~~~~~~--~-id~e~l~~~i~~----- 216 (249)
+.+++... -.| .+|+...-+|......+.. .| ..+..+|....+ . -|++.+++.+++
T Consensus 117 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~ 196 (425)
T PRK09264 117 EAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGV 196 (425)
T ss_pred HHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCC
Confidence 98887542 123 6788888877644322211 11 123444432111 1 267788888753
Q ss_pred CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 217 EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 217 ~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 197 ~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g 232 (425)
T PRK09264 197 DLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHD 232 (425)
T ss_pred CceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 1345665544344467655544 55788999986
No 357
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=94.79 E-value=1.1 Score=41.92 Aligned_cols=92 Identities=14% Similarity=0.100 Sum_probs=57.1
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCCC-----CCCCcChHHHHHHHHHHcCCCC-CCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~la~~~~~~~-~~I~vt~Ga~~~l~~~ 162 (249)
.+...||+..+- ..++ ..|.+.+++.+ +.... .+..+...+|-+.|++.+.-.. +.++++++++++.+.+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~A 131 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENA 131 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHH
Confidence 456678887763 2232 45678888765 33211 1222234567777777664222 5899999999999998
Q ss_pred HHHhc--CCCCeEEEcCCCChhHH
Q 025730 163 MRCVL--DPGDKIVDCPPTFTMYE 184 (249)
Q Consensus 163 ~~~~~--~pGd~Vlv~~P~y~~~~ 184 (249)
++... ....+|+...-+|....
T Consensus 132 lklAr~~tgr~~ii~~~~~yHG~t 155 (451)
T PRK06918 132 VKIARKYTKRQGIISFSRGFHGRT 155 (451)
T ss_pred HHHHHHHhCCCcEEEECCCcCccc
Confidence 87432 22367888888886443
No 358
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=94.78 E-value=1 Score=42.03 Aligned_cols=157 Identities=11% Similarity=0.131 Sum_probs=85.8
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCC-----CCCCCcChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~ 162 (249)
.+...||+..+- ..++ ..+.+.+++.+ +... ..|+.+...+|-+.|++...-. .+.++++++++++.+.+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~A 131 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAA 131 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHH
Confidence 456778887763 2333 34677777765 3321 1233333456667777665421 36899999999999998
Q ss_pred HHHhc--CCCCeEEEcCCCChhHHHHH-HHCCC-------------EEEEecCCCCCC-----C--------CHHHHHH-
Q 025730 163 MRCVL--DPGDKIVDCPPTFTMYEFDA-AVNGA-------------AVVKVPRKSDFS-----L--------NVELIAD- 212 (249)
Q Consensus 163 ~~~~~--~pGd~Vlv~~P~y~~~~~~~-~~~G~-------------~v~~v~~~~~~~-----i--------d~e~l~~- 212 (249)
++... ...++|+...-+|......+ ...|. .+..++....+. - +++.+++
T Consensus 132 lklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 211 (441)
T PRK05769 132 IKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDY 211 (441)
T ss_pred HHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHH
Confidence 87431 22367888887776443322 11121 123333211111 0 1234555
Q ss_pred hhc----cCCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 213 AVE----REKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 213 ~i~----~~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.++ ..++.+|++.-...-.|...++. +.+..+|++||
T Consensus 212 ~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g 255 (441)
T PRK05769 212 LFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYG 255 (441)
T ss_pred HHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 222 13456666544445567765544 44778898876
No 359
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=94.75 E-value=0.11 Score=47.41 Aligned_cols=109 Identities=16% Similarity=0.016 Sum_probs=68.1
Q ss_pred HcCCC-CCCEEEeCCHHHHHHHHHHHhc---CCCCeEEEcCCCChhHHHHHHHCCCEEEEecC---CCCCCCCHHHHHHh
Q 025730 141 DSGLE-SDHILVGCGADELIDLIMRCVL---DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADA 213 (249)
Q Consensus 141 ~~~~~-~~~I~vt~Ga~~~l~~~~~~~~---~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~---~~~~~id~e~l~~~ 213 (249)
..|+. ....++.+.+|..-..+....+ ..++.|+.+.-.+..-...++.+|.+++.|+. .+....|++.+++.
T Consensus 68 ~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~ 147 (389)
T PF05889_consen 68 LAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAK 147 (389)
T ss_dssp HTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHH
T ss_pred HcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHH
Confidence 34764 3456777777654443333333 35688888877776656667779999999982 23344578888888
Q ss_pred hcc--CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 214 VER--EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 214 i~~--~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+++ .+..+.++++++--.|..-++.+.+++||+++|
T Consensus 148 i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~ 185 (389)
T PF05889_consen 148 IEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYD 185 (389)
T ss_dssp HHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT
T ss_pred HHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcC
Confidence 864 345677788877666777334788999999986
No 360
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=94.73 E-value=0.77 Score=42.81 Aligned_cols=157 Identities=10% Similarity=0.119 Sum_probs=87.9
Q ss_pred CCCCeeeccCCC--CCC-CCCHHHHHHHHh-ccCCC-----CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~-~~p~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...+|+..+- ..+ -..|.+.+++.+ +.... .+..+...+|-+.|++..+-..+.++++++++++.+.++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~Al 120 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAM 120 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHH
Confidence 456678887652 333 245778888765 33211 123233455667777666533468999999999999988
Q ss_pred HHhcC-------CCCeEEEcCCCChhHHHHHHH-CCC-------------EEEEecCCC-C----C-CCCHHHHHHhhcc
Q 025730 164 RCVLD-------PGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS-D----F-SLNVELIADAVER 216 (249)
Q Consensus 164 ~~~~~-------pGd~Vlv~~P~y~~~~~~~~~-~G~-------------~v~~v~~~~-~----~-~id~e~l~~~i~~ 216 (249)
+.... ...+|+...-+|......+.. .|. .+..++... . + .-|++++++.++.
T Consensus 121 klAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~ 200 (428)
T PRK07986 121 KMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA 200 (428)
T ss_pred HHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh
Confidence 75421 236788888888643222111 111 112232111 1 1 1256777777752
Q ss_pred --CCceEEEEcCC-CCccccCCChH---HHHHHHhhhhC
Q 025730 217 --EKPKCIFLTSP-NNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 217 --~~~k~i~l~~P-nNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.++.+|++.-. ..-.|...++. +.+.++|++||
T Consensus 201 ~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g 239 (428)
T PRK07986 201 HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREG 239 (428)
T ss_pred CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 23455554432 44456654443 55788999886
No 361
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=94.60 E-value=1.7 Score=40.74 Aligned_cols=157 Identities=15% Similarity=0.174 Sum_probs=93.7
Q ss_pred CCCCeeeccCCCC--CCC-CCHHHHHHHHh-cc----CCCCC-CCcChHHHHHHHHHHcCC-CCCCEEEeCCHHHHHHHH
Q 025730 93 KPEDIVKIDANEN--PYG-PPPEVREALGQ-LK----FPYIY-PDPESRRLRAALAKDSGL-ESDHILVGCGADELIDLI 162 (249)
Q Consensus 93 ~~~~~I~L~~~~~--~~~-~p~~v~~al~~-~~----~~~~Y-p~~g~~~lr~~la~~~~~-~~~~I~vt~Ga~~~l~~~ 162 (249)
.+...|||..+.+ .++ ..|.+.+++.+ +. ...+| .....-++-+.|.+.+.- ..+.++++++++++.+.+
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~A 133 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAA 133 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHH
Confidence 4567899988533 332 56888888875 32 12333 223345566666666654 456799999999999999
Q ss_pred HHHh--cCCCCeEEEcCCCCh-hHHHHHHHCC-------------CEEEEecCCCC----CCC--------CHHHHHHhh
Q 025730 163 MRCV--LDPGDKIVDCPPTFT-MYEFDAAVNG-------------AAVVKVPRKSD----FSL--------NVELIADAV 214 (249)
Q Consensus 163 ~~~~--~~pGd~Vlv~~P~y~-~~~~~~~~~G-------------~~v~~v~~~~~----~~i--------d~e~l~~~i 214 (249)
++.. ......|+...-.|. .......+.| ..+..+|.... +.. ..+.++..+
T Consensus 134 iKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i 213 (447)
T COG0160 134 IKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERAL 213 (447)
T ss_pred HHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHH
Confidence 8753 223366777777774 2222222222 22455553221 111 234455544
Q ss_pred cc-----CCceEEEEcCCCCccccCCChHHH---HHHHhhhhC
Q 025730 215 ER-----EKPKCIFLTSPNNPDGRFSWTSSW---IWGISSEHN 249 (249)
Q Consensus 215 ~~-----~~~k~i~l~~PnNPTG~~~~~~e~---i~~i~~~~~ 249 (249)
.. .++.++++---..-.|.+.++.++ +.++|++||
T Consensus 214 ~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~g 256 (447)
T COG0160 214 FDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHG 256 (447)
T ss_pred HhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 32 235667666667888988888855 678999986
No 362
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=94.59 E-value=0.6 Score=43.43 Aligned_cols=157 Identities=10% Similarity=0.137 Sum_probs=87.4
Q ss_pred CCCCeeeccCCC--CCC-CCCHHHHHHHHh-ccCC----C-CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDANE--NPY-GPPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~-~~p~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...+|+..+. ..+ -..+.+.+++.+ +... . .+......++-+.+++.++-.-+.++++++++++.+.++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~Al 122 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVAL 122 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHH
Confidence 345678887653 222 245677777765 3321 1 123333556777777776543468999999999999888
Q ss_pred HHhcC-------CC-CeEEEcCCCChhHHHHHHH-CCCE-------------EEEecCC-CCCC-----CCHHHHHHhhc
Q 025730 164 RCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRK-SDFS-----LNVELIADAVE 215 (249)
Q Consensus 164 ~~~~~-------pG-d~Vlv~~P~y~~~~~~~~~-~G~~-------------v~~v~~~-~~~~-----id~e~l~~~i~ 215 (249)
+.... +| .+|+...-+|......+.. .|.. +..++.. ..+. -|++++++.+.
T Consensus 123 klAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~ 202 (427)
T TIGR00508 123 KMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME 202 (427)
T ss_pred HHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence 75421 23 6788888888643322221 1211 1122210 1111 14667777775
Q ss_pred c--CCceEEEEcCC-CCccccCCChH---HHHHHHhhhhC
Q 025730 216 R--EKPKCIFLTSP-NNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 216 ~--~~~k~i~l~~P-nNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
+ .+..+|++.-. .+-.|....+. +.+.++|++||
T Consensus 203 ~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~ 242 (427)
T TIGR00508 203 LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYD 242 (427)
T ss_pred hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 2 24455554432 55556655444 44788999885
No 363
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=94.56 E-value=0.85 Score=42.50 Aligned_cols=157 Identities=12% Similarity=0.143 Sum_probs=88.6
Q ss_pred CCCCeeeccCC--CCCC-CCCHHHHHHHHh-ccCC---C--CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPY-GPPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~-~~p~~v~~al~~-~~~~---~--~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
++...+|+..+ ...+ -..|.+.+++.+ +... . .|..+...+|-+.|++.+....+.++++++++++.+.++
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Al 121 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAM 121 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHH
Confidence 45667888665 2222 234677777765 3221 1 233334566777777776433468999999999999988
Q ss_pred HHhcC-------CC-CeEEEcCCCChhHHHHHH-HCCC-------------EEEEecCCC-CCC-----CCHHHHHHhhc
Q 025730 164 RCVLD-------PG-DKIVDCPPTFTMYEFDAA-VNGA-------------AVVKVPRKS-DFS-----LNVELIADAVE 215 (249)
Q Consensus 164 ~~~~~-------pG-d~Vlv~~P~y~~~~~~~~-~~G~-------------~v~~v~~~~-~~~-----id~e~l~~~i~ 215 (249)
+.... +| .+|+...-+|......+. ..|. .+..+|... .+. -+++.+++.++
T Consensus 122 klAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~ 201 (429)
T PRK06173 122 KMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLE 201 (429)
T ss_pred HHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHH
Confidence 75421 33 578888887764322111 1110 112233111 111 13666777774
Q ss_pred c--CCceEEEEcCC-CCccccCCChH---HHHHHHhhhhC
Q 025730 216 R--EKPKCIFLTSP-NNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 216 ~--~~~k~i~l~~P-nNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
. .++.+|++.-- ..-.|...++. +.+.++|++||
T Consensus 202 ~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g 241 (429)
T PRK06173 202 QKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYG 241 (429)
T ss_pred hCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcC
Confidence 2 34666665532 56567775565 44778899886
No 364
>PRK07483 hypothetical protein; Provisional
Probab=94.53 E-value=1.2 Score=41.62 Aligned_cols=91 Identities=11% Similarity=0.197 Sum_probs=56.6
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCC-----CCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
.+...||+..+ ...++ ..|.+.+++.+ +... ..|..+...+|-+.|++...-..+.++++++++++.+.++
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~Al 107 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAAL 107 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHH
Confidence 45677888776 33333 45677777765 3321 1133333456667777665433468999999999999888
Q ss_pred HHhcC-------CC-CeEEEcCCCChhH
Q 025730 164 RCVLD-------PG-DKIVDCPPTFTMY 183 (249)
Q Consensus 164 ~~~~~-------pG-d~Vlv~~P~y~~~ 183 (249)
+.... +| .+|+...-.|...
T Consensus 108 klAr~~~~~~g~~~r~~Ii~~~~~YHG~ 135 (443)
T PRK07483 108 KLARQYFVEIGQPQRRHFIARRQSYHGN 135 (443)
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 75321 33 5688877777543
No 365
>PRK07481 hypothetical protein; Provisional
Probab=94.31 E-value=1.5 Score=41.11 Aligned_cols=157 Identities=13% Similarity=0.174 Sum_probs=85.7
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCCC------CCCCcChHHHHHHHHHHcC-CCCCCEEEeCCHHHHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY------IYPDPESRRLRAALAKDSG-LESDHILVGCGADELIDL 161 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~~------~Yp~~g~~~lr~~la~~~~-~~~~~I~vt~Ga~~~l~~ 161 (249)
++...||+..+ ...++ ..|.+.+++.+ +.... .++.+...+|-+.|++.++ -..+.++++++++++.+.
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~ 119 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVET 119 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHH
Confidence 45567888665 22332 44677777765 33211 2333334567777777763 123579999999999999
Q ss_pred HHHHhcC-------CC-CeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCC----CC-CCHHHH-----
Q 025730 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS-LNVELI----- 210 (249)
Q Consensus 162 ~~~~~~~-------pG-d~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~----~~-id~e~l----- 210 (249)
+++.... +| .+|+...-.|......+.. .|. .+..++.... +. .|++.+
T Consensus 120 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~ 199 (449)
T PRK07481 120 ALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICA 199 (449)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHH
Confidence 8875321 33 5788888888654332211 110 1222321111 11 134333
Q ss_pred ---HHhhc---cCCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 211 ---ADAVE---REKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 211 ---~~~i~---~~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
++.+. ..++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 200 ~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g 247 (449)
T PRK07481 200 RLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHG 247 (449)
T ss_pred HHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcC
Confidence 33332 13466666554344457765555 45788999886
No 366
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.13 E-value=0.35 Score=46.93 Aligned_cols=115 Identities=20% Similarity=0.212 Sum_probs=74.7
Q ss_pred HHHHHHHHcCCCCCCEEEeCCH---HHHHHHHHHHhcCCC----CeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCC
Q 025730 134 LRAALAKDSGLESDHILVGCGA---DELIDLIMRCVLDPG----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206 (249)
Q Consensus 134 lr~~la~~~~~~~~~I~vt~Ga---~~~l~~~~~~~~~pG----d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id 206 (249)
|.+.|+...|.+.-..-.-+|+ -.+|..+-..+...| ...+++...++.-...++++|.+++.|..+.++.+|
T Consensus 587 Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~id 666 (1001)
T KOG2040|consen 587 LEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNID 666 (1001)
T ss_pred HHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCcc
Confidence 4444444446443223333333 334444333333444 357888888988888899999999999998999999
Q ss_pred HHHHHHhhccC--CceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 207 VELIADAVERE--KPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 207 ~e~l~~~i~~~--~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..+|.+..++. +-.+++++-|+. -|+.-+..+.+-.+.++||
T Consensus 667 ~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehG 710 (1001)
T KOG2040|consen 667 MVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHG 710 (1001)
T ss_pred HHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcC
Confidence 99999988643 456888888874 4655333455555666664
No 367
>PRK06148 hypothetical protein; Provisional
Probab=93.99 E-value=1.2 Score=46.02 Aligned_cols=90 Identities=11% Similarity=-0.013 Sum_probs=60.0
Q ss_pred CCCCeeeccCCCCCCC-CCHHHHHHHHh-cc---CCCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 025730 93 KPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (249)
Q Consensus 93 ~~~~~I~L~~~~~~~~-~p~~v~~al~~-~~---~~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~ 167 (249)
.+...||+..+...++ ..|.+.+++.+ +. ....|..+...+|-+.|++.+.-.-+.+.++++++|+.+.+++...
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr 701 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLAR 701 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHH
Confidence 3566788877754454 45778887765 33 2234554445667777777765334678999999999999988542
Q ss_pred --CCCCeEEEcCCCChh
Q 025730 168 --DPGDKIVDCPPTFTM 182 (249)
Q Consensus 168 --~pGd~Vlv~~P~y~~ 182 (249)
....+|+...-+|..
T Consensus 702 ~~tGr~~ii~~~~~YHG 718 (1013)
T PRK06148 702 AHTGQRDAIVLDHAYHG 718 (1013)
T ss_pred HhcCCCeEEEEcCCccC
Confidence 223678888877753
No 368
>PRK12566 glycine dehydrogenase; Provisional
Probab=93.04 E-value=2.8 Score=42.87 Aligned_cols=138 Identities=10% Similarity=0.029 Sum_probs=84.0
Q ss_pred eeccCCCCCCCCCHHHHHHHHh-ccCCCCC-C---C--cC----hHHHHHHHHHHcCCCCCCEEEeCCHHHHHH---HHH
Q 025730 98 VKIDANENPYGPPPEVREALGQ-LKFPYIY-P---D--PE----SRRLRAALAKDSGLESDHILVGCGADELID---LIM 163 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~-~~~~~~Y-p---~--~g----~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~---~~~ 163 (249)
.-++.|.-+.-.|..+.+.+.+ -.+...| | + +| .-++...++++.|++-.|--+-.|++.+-+ ++.
T Consensus 82 ~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~ 161 (954)
T PRK12566 82 SLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAK 161 (954)
T ss_pred ccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHH
Confidence 4556666666677777566554 3333344 3 2 23 346788889999987655555456554444 333
Q ss_pred HHhcCCCCeEEEcCCCChhHHHHH----HHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCChHH
Q 025730 164 RCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSS 239 (249)
Q Consensus 164 ~~~~~pGd~Vlv~~P~y~~~~~~~----~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e 239 (249)
+..-....+|+++.-.++.+.... +..|.+++. +++++.++ .++-+|++.+||. .|.+ .+.+
T Consensus 162 ~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~-~~~~~v~vq~P~~-~G~i-~d~~ 227 (954)
T PRK12566 162 RVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAA-HAVFGALLQYPDT-HGEI-RDLR 227 (954)
T ss_pred HHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCC-CCEEEEEEECCCC-ceEE-ccHH
Confidence 321112468999999998666543 346777764 33344444 4688898999984 7888 4555
Q ss_pred HHHHHhhhhC
Q 025730 240 WIWGISSEHN 249 (249)
Q Consensus 240 ~i~~i~~~~~ 249 (249)
.+..+++++|
T Consensus 228 ~i~~~~h~~g 237 (954)
T PRK12566 228 PLIDQLHGQQ 237 (954)
T ss_pred HHHHHHHHcC
Confidence 6666676654
No 369
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=92.67 E-value=3 Score=39.30 Aligned_cols=157 Identities=15% Similarity=0.172 Sum_probs=84.4
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCCC-----CCCCcChHHHHHHHHHHcCCC--C-CCEEEe-CCHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLE--S-DHILVG-CGADELI 159 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~la~~~~~~--~-~~I~vt-~Ga~~~l 159 (249)
.+...||+..+- ..++ ..|.+.+++.+ +.... .|+.+...+|-+.+.+.+.-. . +.++++ ++++++.
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAv 140 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAV 140 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHH
Confidence 456778886663 2232 45778888765 32111 233333445556666554311 1 356554 7889999
Q ss_pred HHHHHHhc-CCC-CeEEEcCCCChhHHHHHHH-CCC------------EEEEecCCCCCC------------CCHHHHHH
Q 025730 160 DLIMRCVL-DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS------------LNVELIAD 212 (249)
Q Consensus 160 ~~~~~~~~-~pG-d~Vlv~~P~y~~~~~~~~~-~G~------------~v~~v~~~~~~~------------id~e~l~~ 212 (249)
+.+++... ..| .+|+...-+|......+.. .|. .+..++....+. .+++.+++
T Consensus 141 e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~ 220 (464)
T PRK06938 141 EAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLEN 220 (464)
T ss_pred HHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHH
Confidence 98887532 133 6788888777643322221 110 123343221111 13677777
Q ss_pred hhcc-----CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 213 AVER-----EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 213 ~i~~-----~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
.+++ .++.+|++.--..--|.+.++. +.+.++|++||
T Consensus 221 ~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~g 265 (464)
T PRK06938 221 LLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAG 265 (464)
T ss_pred HHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 7753 1355665543233347665555 45788999986
No 370
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=92.31 E-value=0.063 Score=48.66 Aligned_cols=112 Identities=14% Similarity=0.158 Sum_probs=7.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh------hHHHHHHHCCCEEEEecCCCCCCC
Q 025730 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT------MYEFDAAVNGAAVVKVPRKSDFSL 205 (249)
Q Consensus 132 ~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~------~~~~~~~~~G~~v~~v~~~~~~~i 205 (249)
..+.+.++...| .+..+++|+...++.+++.+++ .|.+|++.--.-. .+..+.+..|++++.|-..+ .-
T Consensus 50 ~~v~~ll~~ltg--AeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~t 124 (367)
T PF03841_consen 50 AHVEELLCELTG--AEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--RT 124 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccc--cccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc--cc
Confidence 345666777777 4567777888888888888775 5677776533221 34566677899999887432 34
Q ss_pred CHHHHHHhhccCCceEEEEcCCCCcc--ccC-CChHHHHHHHhhhhC
Q 025730 206 NVELIADAVEREKPKCIFLTSPNNPD--GRF-SWTSSWIWGISSEHN 249 (249)
Q Consensus 206 d~e~l~~~i~~~~~k~i~l~~PnNPT--G~~-~~~~e~i~~i~~~~~ 249 (249)
.+++++++++ ++|.+++-.|++|-. |.. ....+.+..++++||
T Consensus 125 ~~~Dye~AI~-e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~ 170 (367)
T PF03841_consen 125 HLSDYEKAIT-ENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHG 170 (367)
T ss_dssp -------------------------------------HHHHHHHHHT
T ss_pred cccccccccc-ccccccccccccccccccccccccHHHHHHHHhhcC
Confidence 5788999998 799999989988863 322 113356677888875
No 371
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=91.82 E-value=4 Score=38.51 Aligned_cols=157 Identities=15% Similarity=0.201 Sum_probs=86.5
Q ss_pred CCCCeeeccCCCC--CCC-CCHHHHHHHHhc--c----CCCCCCCcChHHHHHHHHH----HcCCCCCCEEEeCCHHHHH
Q 025730 93 KPEDIVKIDANEN--PYG-PPPEVREALGQL--K----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADELI 159 (249)
Q Consensus 93 ~~~~~I~L~~~~~--~~~-~p~~v~~al~~~--~----~~~~Yp~~g~~~lr~~la~----~~~~~~~~I~vt~Ga~~~l 159 (249)
++...||+..+-. .++ ..+.+.+++.+- . ....|+.....+|-+.+++ ...-..+.++++++++|+.
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAv 135 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDAN 135 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHH
Confidence 4567788877632 222 457777777641 1 1122333334445555544 3322236899999999999
Q ss_pred HHHHHHhcC--------------------------CC---CeEEEcCCCChhHHHHHH-HCCCE-----------EEEec
Q 025730 160 DLIMRCVLD--------------------------PG---DKIVDCPPTFTMYEFDAA-VNGAA-----------VVKVP 198 (249)
Q Consensus 160 ~~~~~~~~~--------------------------pG---d~Vlv~~P~y~~~~~~~~-~~G~~-----------v~~v~ 198 (249)
+.+++.... +| .+|+...-+|......+. ..|.. +..+|
T Consensus 136 E~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p 215 (464)
T TIGR00699 136 ELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAP 215 (464)
T ss_pred HHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecC
Confidence 999885411 11 268888888864333222 12211 11222
Q ss_pred CCC-C--C-----------CCCHHHHHHhhcc--CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 199 RKS-D--F-----------SLNVELIADAVER--EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 199 ~~~-~--~-----------~id~e~l~~~i~~--~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
... . + .-+++.+++.+++ .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g 285 (464)
T TIGR00699 216 FPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHN 285 (464)
T ss_pred CCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 110 0 0 0135667777742 3466666554455567776555 45788999886
No 372
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=91.36 E-value=3.5 Score=38.30 Aligned_cols=116 Identities=18% Similarity=0.133 Sum_probs=74.1
Q ss_pred HHHHHHHHHcCCCC--CCEEEeCCHHHHHHHHHHHhc--CC-----C-----C-eEEEcCCCChhHHHHHHHCC---CEE
Q 025730 133 RLRAALAKDSGLES--DHILVGCGADELIDLIMRCVL--DP-----G-----D-KIVDCPPTFTMYEFDAAVNG---AAV 194 (249)
Q Consensus 133 ~lr~~la~~~~~~~--~~I~vt~Ga~~~l~~~~~~~~--~p-----G-----d-~Vlv~~P~y~~~~~~~~~~G---~~v 194 (249)
++-..+.+..|.+. |.|+.-.|+..-++.+..+-- -| | + .+.+.+-+|......+...| -.+
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c 224 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHC 224 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence 44445555556655 455554555544444433221 12 1 2 23355566667777788888 688
Q ss_pred EEecCCCCCCCCHHHHHHhhccCCce----E-EEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 195 VKVPRKSDFSLNVELIADAVEREKPK----C-IFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 195 ~~v~~~~~~~id~e~l~~~i~~~~~k----~-i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+.|+.++.+.+++++|++.|-..+.+ . |-.+.-+...|.. ++.+.++.+|++|+
T Consensus 225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF-DdL~~iadiC~k~~ 283 (510)
T KOG0629|consen 225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF-DDLNGIADICEKHK 283 (510)
T ss_pred EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc-CcHHHHHHHHHhcC
Confidence 99999899999999999988543333 2 2222335677888 88899999999985
No 373
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=91.23 E-value=4.7 Score=37.80 Aligned_cols=139 Identities=15% Similarity=0.209 Sum_probs=79.4
Q ss_pred HHHHHHHHh----ccCCCCC--CCcChHHHHHHHHHHcC-CCCCCEEEeCCHHHHHHHHHHHhc-------CCC-CeEEE
Q 025730 111 PEVREALGQ----LKFPYIY--PDPESRRLRAALAKDSG-LESDHILVGCGADELIDLIMRCVL-------DPG-DKIVD 175 (249)
Q Consensus 111 ~~v~~al~~----~~~~~~Y--p~~g~~~lr~~la~~~~-~~~~~I~vt~Ga~~~l~~~~~~~~-------~pG-d~Vlv 175 (249)
+++.+++.+ +.+...+ ......+|-+.|+++.. -+-++|++++|++++++.+++... +|+ .+++.
T Consensus 63 ~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Is 142 (449)
T COG0161 63 PEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFIS 142 (449)
T ss_pred HHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEE
Confidence 566666654 3332222 11226678888888886 446799999999999999987652 233 34777
Q ss_pred cCCCChhHHHHHHH-----------CC---CEEEEecCCC--------CCC----CCHHHHHHhhccC--CceEEEEcCC
Q 025730 176 CPPTFTMYEFDAAV-----------NG---AAVVKVPRKS--------DFS----LNVELIADAVERE--KPKCIFLTSP 227 (249)
Q Consensus 176 ~~P~y~~~~~~~~~-----------~G---~~v~~v~~~~--------~~~----id~e~l~~~i~~~--~~k~i~l~~P 227 (249)
-..+|..-...+.. ++ ..+..++... .+. -..++|++.+... ..-+-+|.-|
T Consensus 143 r~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EP 222 (449)
T COG0161 143 RRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEP 222 (449)
T ss_pred eccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecc
Confidence 77777421111111 11 1122333111 111 2356777777642 2334445555
Q ss_pred -CC-ccccCCChH---HHHHHHhhhhC
Q 025730 228 -NN-PDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 228 -nN-PTG~~~~~~---e~i~~i~~~~~ 249 (249)
-. -.|..+++. +.+++||++||
T Consensus 223 v~g~agG~~~pp~~Yl~~vr~iC~ky~ 249 (449)
T COG0161 223 VVGGAGGMLVPPPGYLKRVREICDKYG 249 (449)
T ss_pred cccccCCcccCChHHHHHHHHHHHHcC
Confidence 33 378877776 56889999986
No 374
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=91.14 E-value=8.4 Score=36.24 Aligned_cols=93 Identities=9% Similarity=0.078 Sum_probs=55.0
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCCC-----CCCCcChHHHHHHHHHHcCCC-C--CCEEEeCCHHHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLE-S--DHILVGCGADELID 160 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~la~~~~~~-~--~~I~vt~Ga~~~l~ 160 (249)
.+...||+..+- ..++ ..|.+.+++.+ +.... .|+.+...+|-+.|++.+.-. . ..++++++++++.+
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve 135 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVE 135 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHH
Confidence 456788887773 2222 45778888775 33211 123333455666666665421 1 23456688999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCChhHHH
Q 025730 161 LIMRCVL--DPGDKIVDCPPTFTMYEF 185 (249)
Q Consensus 161 ~~~~~~~--~pGd~Vlv~~P~y~~~~~ 185 (249)
.+++... ...++|+...-.|.....
T Consensus 136 ~AlklAr~~tgr~~Ii~~~~~yHG~t~ 162 (459)
T PRK06931 136 AAIKLAKTYTGRSNVISFSGGYHGMTH 162 (459)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccH
Confidence 8887532 233678888888865443
No 375
>PRK08297 L-lysine aminotransferase; Provisional
Probab=90.54 E-value=5.4 Score=37.31 Aligned_cols=157 Identities=13% Similarity=0.163 Sum_probs=83.4
Q ss_pred CCCCeeeccCC--CCCCC-CCHHHHH--HHHh-cc-----CC--CCCCCcChHHHHHHHHHHc-CCCCCCEEEeCCHHHH
Q 025730 93 KPEDIVKIDAN--ENPYG-PPPEVRE--ALGQ-LK-----FP--YIYPDPESRRLRAALAKDS-GLESDHILVGCGADEL 158 (249)
Q Consensus 93 ~~~~~I~L~~~--~~~~~-~p~~v~~--al~~-~~-----~~--~~Yp~~g~~~lr~~la~~~-~~~~~~I~vt~Ga~~~ 158 (249)
.+...||+..+ ...++ ..|.+.+ ++.+ +. .. ..|......+|-+.|++.. .-..+.|+++++++|+
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA 122 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA 122 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence 34556777655 22332 3456666 6654 32 11 1233333455666666665 2234689999999999
Q ss_pred HHHHHHHhc----------C---C-CCeEEEcCCCChhHHHHHHH-CCCEE-----------EEecCCC------CCC--
Q 025730 159 IDLIMRCVL----------D---P-GDKIVDCPPTFTMYEFDAAV-NGAAV-----------VKVPRKS------DFS-- 204 (249)
Q Consensus 159 l~~~~~~~~----------~---p-Gd~Vlv~~P~y~~~~~~~~~-~G~~v-----------~~v~~~~------~~~-- 204 (249)
.+.+++... . + ..+|+...-+|......+.. .|... ..++... +..
T Consensus 123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (443)
T PRK08297 123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE 202 (443)
T ss_pred HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence 999988641 1 1 25788888888644332222 22110 0011000 000
Q ss_pred -C------CHHHHHHhhcc--CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 205 -L------NVELIADAVER--EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 205 -i------d~e~l~~~i~~--~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
. +++.+++.+.+ .++.+|++.-...-.|.+.++. +.+.++|++||
T Consensus 203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g 259 (443)
T PRK08297 203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHD 259 (443)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 0 23555566642 3566666543333346654554 45788999986
No 376
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=90.43 E-value=1.9 Score=39.82 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=78.6
Q ss_pred CCCHHHHHHHHh-cc-CC-----CCC-C--CcChHHHHHHHHHHcCCCC----CCEEEeCCHHHHHHHHHHHhcCCCCeE
Q 025730 108 GPPPEVREALGQ-LK-FP-----YIY-P--DPESRRLRAALAKDSGLES----DHILVGCGADELIDLIMRCVLDPGDKI 173 (249)
Q Consensus 108 ~~p~~v~~al~~-~~-~~-----~~Y-p--~~g~~~lr~~la~~~~~~~----~~I~vt~Ga~~~l~~~~~~~~~pGd~V 173 (249)
..-|.|.+|+.+ ++ ++ .+- . +.-..+|.+.||++++-+. ...++.|-++ |..+.+. -||-++
T Consensus 185 s~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDst--LftLak~--lpgcei 260 (570)
T KOG1360|consen 185 SRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDST--LFTLAKK--LPGCEI 260 (570)
T ss_pred cCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchH--HHHHHHH--CCCcEE
Confidence 345788888876 32 11 111 1 1124679999999987332 2334444443 3444442 366666
Q ss_pred EEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc---CCceEEEEcCCCCccccCCChHHHHHHHhhhhC
Q 025730 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 174 lv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~---~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
+-..--+.....-++..++.=....- -|++.|++.++. .-+|+|-+.+.+.-+|.+ .+.+++-.++++||
T Consensus 261 ~SD~gNHASMI~GIrns~v~K~IFrH-----ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gav-cpleelcDvah~yG 333 (570)
T KOG1360|consen 261 FSDEGNHASMIQGIRNSRVPKHIFRH-----NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAV-CPLEELCDVAHKYG 333 (570)
T ss_pred eccccchHHHHHHhhhcCCcceeecc-----CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCc-CCHHHHHHHHHHhC
Confidence 55554454444444444433222221 268888888764 347899999999999999 67777777888875
No 377
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=89.18 E-value=5.4 Score=37.09 Aligned_cols=151 Identities=13% Similarity=0.152 Sum_probs=78.5
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHHHHHHh-ccCCCCCCCc--ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~~al~~-~~~~~~Yp~~--g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~ 166 (249)
.+...||+..+- ..++ ..|.+.+++.+ +.....|... ...+|-+.|++.+.- .+.+.++++++++.+.+++..
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklA 124 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVRLA 124 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHHHH
Confidence 456678887663 2333 45778888775 4433333322 223567777777631 368999999999999998843
Q ss_pred c-CCC-CeEEEc-CCCChhHHHHHHHCCCEEE--Eec-----CCCCC-CCCHHHHHHhhcc--CCceEEEEcCCCCcccc
Q 025730 167 L-DPG-DKIVDC-PPTFTMYEFDAAVNGAAVV--KVP-----RKSDF-SLNVELIADAVER--EKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 167 ~-~pG-d~Vlv~-~P~y~~~~~~~~~~G~~v~--~v~-----~~~~~-~id~e~l~~~i~~--~~~k~i~l~~PnNPTG~ 233 (249)
. -.| .+|+.. .-.|..+.... .|.... .++ ....+ .-|++.+++.+++ .++.+|+ .-|- .|.
T Consensus 125 r~~tgr~~i~~~~~~~~h~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi-~Epv--~g~ 199 (431)
T PRK06209 125 RAYTGRDLVARCADHPFFSTDDWF--IGTTPMSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVI-LEPA--TAD 199 (431)
T ss_pred HHHhCCCeEEEeccCccccccccc--cccCCCCCCCChhHhccccccCCCCHHHHHHHHHhCCCCEEEEE-Eccc--cCC
Confidence 2 124 345543 22221111000 111100 000 00001 1278899988853 2344555 4442 233
Q ss_pred CCCh--HHHHHHHhhhhC
Q 025730 234 FSWT--SSWIWGISSEHN 249 (249)
Q Consensus 234 ~~~~--~e~i~~i~~~~~ 249 (249)
..+. .+.+.++|++||
T Consensus 200 ~~~~~~l~~l~~lc~~~g 217 (431)
T PRK06209 200 EPQDGFLHEVRRLCHENG 217 (431)
T ss_pred CCCHHHHHHHHHHHHHcC
Confidence 3222 255788999886
No 378
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=88.61 E-value=6.1 Score=36.77 Aligned_cols=157 Identities=11% Similarity=0.140 Sum_probs=81.5
Q ss_pred CCCCeeeccCCC--CCCC-CCHHHH--HHHHh-ccCC-----C--CCCCcChHHHHHHHHHHcC-CCCCCEEEeCCHHHH
Q 025730 93 KPEDIVKIDANE--NPYG-PPPEVR--EALGQ-LKFP-----Y--IYPDPESRRLRAALAKDSG-LESDHILVGCGADEL 158 (249)
Q Consensus 93 ~~~~~I~L~~~~--~~~~-~p~~v~--~al~~-~~~~-----~--~Yp~~g~~~lr~~la~~~~-~~~~~I~vt~Ga~~~ 158 (249)
.+...||+..+- ..++ ..|.+. +++.+ +... . .+......++-+.|++... -..+.++++++++++
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA 115 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA 115 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence 345567775552 2232 345666 66654 2211 1 1222223445555555542 123689999999999
Q ss_pred HHHHHHHhc----------C-C---CCeEEEcCCCChhHHHHHH-HCCCE-EE----------E--ec-----CCC-CCC
Q 025730 159 IDLIMRCVL----------D-P---GDKIVDCPPTFTMYEFDAA-VNGAA-VV----------K--VP-----RKS-DFS 204 (249)
Q Consensus 159 l~~~~~~~~----------~-p---Gd~Vlv~~P~y~~~~~~~~-~~G~~-v~----------~--v~-----~~~-~~~ 204 (249)
.+.+++... . + +.+|+...-+|......+. ..|.. .. . .| .+. +..
T Consensus 116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 195 (431)
T TIGR03251 116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD 195 (431)
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence 999887542 0 1 3679888888864332222 22211 00 0 11 000 000
Q ss_pred -------CCHHHHHHhhcc--CCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 205 -------LNVELIADAVER--EKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 205 -------id~e~l~~~i~~--~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
-+++++++.+.+ .++.+|++.-...-.|.+..+. +.+.++|++||
T Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g 252 (431)
T TIGR03251 196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHD 252 (431)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcC
Confidence 124455555532 4567777664455567765554 45788999986
No 379
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=88.22 E-value=5.1 Score=36.00 Aligned_cols=156 Identities=17% Similarity=0.252 Sum_probs=85.2
Q ss_pred CCCeeeccCC--CCCCC-CCHHHHHHHHh-ccCC-C----CCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHH
Q 025730 94 PEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-Y----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 94 ~~~~I~L~~~--~~~~~-~p~~v~~al~~-~~~~-~----~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
+...+|+..+ ...++ ..|.+.+++.+ +... + .+..+...+|-+.|.+.++-..+.++++++++++++.+++
T Consensus 15 G~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alk 94 (339)
T PF00202_consen 15 GREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALK 94 (339)
T ss_dssp SEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHH
T ss_pred CCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHH
Confidence 4567888654 34443 34677777765 3221 1 1222234577778888774445789999999999999998
Q ss_pred Hhc-------CCC-CeEEEcCCCChhHHHHH-HHCC------------CEEEEecCCCCCC-----CCHHHHHH---hhc
Q 025730 165 CVL-------DPG-DKIVDCPPTFTMYEFDA-AVNG------------AAVVKVPRKSDFS-----LNVELIAD---AVE 215 (249)
Q Consensus 165 ~~~-------~pG-d~Vlv~~P~y~~~~~~~-~~~G------------~~v~~v~~~~~~~-----id~e~l~~---~i~ 215 (249)
... .+| .+|+...-+|......+ ...+ ..+..+|..+... -..+.+++ ...
T Consensus 95 la~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (339)
T PF00202_consen 95 LARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALN 174 (339)
T ss_dssp HHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhc
Confidence 655 223 78888888886322211 1111 2345555421110 00111222 222
Q ss_pred cCCceEEEEcCCCCccccCCChH---HHHHHHhhhhC
Q 025730 216 REKPKCIFLTSPNNPDGRFSWTS---SWIWGISSEHN 249 (249)
Q Consensus 216 ~~~~k~i~l~~PnNPTG~~~~~~---e~i~~i~~~~~ 249 (249)
..++.+|++.--..-.|....+. +.+.++|++||
T Consensus 175 ~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~g 211 (339)
T PF00202_consen 175 ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHG 211 (339)
T ss_dssp GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT
T ss_pred CCcEEEEEEeccccccCccccccchhhehcccccccc
Confidence 24555666543344456665554 55788999986
No 380
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=86.29 E-value=8.4 Score=32.62 Aligned_cols=93 Identities=18% Similarity=0.252 Sum_probs=63.0
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEE--------------EcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhh
Q 025730 149 ILVGCGADELIDLIMRCVLDPGDKIV--------------DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pGd~Vl--------------v~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i 214 (249)
+.+-+|+.++...+..++ +.|-.|. .-.|........++..|..++.........-.++++.+++
T Consensus 4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l 82 (223)
T COG2102 4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEAL 82 (223)
T ss_pred EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHH
Confidence 566788888877777654 4453332 1111112345566778999888886554555688998888
Q ss_pred ccCCceEEEEcCCCCccccCCChH--HHHHHHhhhhC
Q 025730 215 EREKPKCIFLTSPNNPDGRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 215 ~~~~~k~i~l~~PnNPTG~~~~~~--e~i~~i~~~~~ 249 (249)
+.-+...|+ +|.+++.. +++..+|++.|
T Consensus 83 ~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lG 112 (223)
T COG2102 83 RRLKVDGIV-------AGAIASEYQKERVERLCEELG 112 (223)
T ss_pred HhCcccEEE-------EchhhhHHHHHHHHHHHHHhC
Confidence 766667887 89888776 45888998754
No 381
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=85.44 E-value=11 Score=34.82 Aligned_cols=142 Identities=14% Similarity=0.112 Sum_probs=85.0
Q ss_pred CCCeeeccCCC-CCCCCCHHHHHH----HHhccCC-----CCCCCc-ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHH
Q 025730 94 PEDIVKIDANE-NPYGPPPEVREA----LGQLKFP-----YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (249)
Q Consensus 94 ~~~~I~L~~~~-~~~~~p~~v~~a----l~~~~~~-----~~Yp~~-g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~ 162 (249)
+.++++|+... -.+...+.+++. +++...+ -.|.+. -..+|.+.||+++|.+ +.|+...| -..+..+
T Consensus 93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E-~aivYs~g-F~ti~S~ 170 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE-DAIVYSYG-FSTIESA 170 (467)
T ss_pred CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc-ceeeeccc-cchhhhc
Confidence 44666666532 223344555543 3332211 235543 3567999999999963 56777666 4577778
Q ss_pred HHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccC-----------Cc-eEEEEcCCCCc
Q 025730 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----------KP-KCIFLTSPNNP 230 (249)
Q Consensus 163 ~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~-----------~~-k~i~l~~PnNP 230 (249)
+.++++.||.+.+..-.......-.+...-++++... .|.+.++..+.+. .+ +.|++.----+
T Consensus 171 ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-----ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N 245 (467)
T KOG1358|consen 171 IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-----NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYAN 245 (467)
T ss_pred chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-----CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccC
Confidence 8899999999998876665555555656666666653 2556666554311 11 23333334456
Q ss_pred cccCCChHHHHH
Q 025730 231 DGRFSWTSSWIW 242 (249)
Q Consensus 231 TG~~~~~~e~i~ 242 (249)
||.+.+..++++
T Consensus 246 ~g~i~pl~~iv~ 257 (467)
T KOG1358|consen 246 TGDICPLPEIVK 257 (467)
T ss_pred CCcccccHHHHH
Confidence 898866555543
No 382
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=82.67 E-value=13 Score=33.05 Aligned_cols=99 Identities=20% Similarity=0.286 Sum_probs=55.3
Q ss_pred CCCCCEEE-eCCHHHHHHHHHHHhcCCCCeEEEcCC-CCh-hHHHHHHHCCCEEEEecCCCCCCC-CHHHHHHhhccCCc
Q 025730 144 LESDHILV-GCGADELIDLIMRCVLDPGDKIVDCPP-TFT-MYEFDAAVNGAAVVKVPRKSDFSL-NVELIADAVEREKP 219 (249)
Q Consensus 144 ~~~~~I~v-t~Ga~~~l~~~~~~~~~pGd~Vlv~~P-~y~-~~~~~~~~~G~~v~~v~~~~~~~i-d~e~l~~~i~~~~~ 219 (249)
+.+...++ .+++.-+|-+++-+-. .|=++++.-| +.. ......+.+|++++.+|...++.. -.+.+++...+..-
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~p~ 137 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAEIPG 137 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhCCC
Confidence 55554443 4444557776665543 3533333333 443 677788889999999996333111 23333334442222
Q ss_pred eEEEE---cCCCCccccCCChHHHHHH
Q 025730 220 KCIFL---TSPNNPDGRFSWTSSWIWG 243 (249)
Q Consensus 220 k~i~l---~~PnNPTG~~~~~~e~i~~ 243 (249)
+++++ .||.||-.+......+++.
T Consensus 138 ~~~~~~Qf~NpaN~~aH~~tT~~EI~~ 164 (300)
T COG0031 138 YAVWLNQFENPANPEAHYETTGPEIWQ 164 (300)
T ss_pred ceEchhhcCCCccHHHHHhhhHHHHHH
Confidence 46765 4788887777555555544
No 383
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=81.04 E-value=8.6 Score=36.01 Aligned_cols=103 Identities=13% Similarity=0.108 Sum_probs=69.1
Q ss_pred CCCCCCHHHHHHHHhccC--C-CCC--CCc-ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 025730 105 NPYGPPPEVREALGQLKF--P-YIY--PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (249)
Q Consensus 105 ~~~~~p~~v~~al~~~~~--~-~~Y--p~~-g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P 178 (249)
+..+..+.+.+++..... . .+- ... ...++.+.+|+++|. ++.+++.-| -..-...+-+++.||.-|+-..-
T Consensus 152 ~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDel 229 (519)
T KOG1357|consen 152 SVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-EDAIVFSMG-FATNSMNIPSLLGKGSLIISDEL 229 (519)
T ss_pred cCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-cceEEEecc-ccccccCcceeecCCcceeeccc
Confidence 334456777788776321 1 111 111 256899999999996 456777666 44455567778899988888888
Q ss_pred CChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhh
Q 025730 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (249)
Q Consensus 179 ~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i 214 (249)
-+.....-++..|+++.....+ |.+.||+.+
T Consensus 230 NHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~L 260 (519)
T KOG1357|consen 230 NHASLITGARLSGATTRVFRHN-----DMQGLERLL 260 (519)
T ss_pred cchheeccccccCceEEEEecC-----CHHHHHHHH
Confidence 8888888888899988777643 345555554
No 384
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=76.93 E-value=18 Score=33.16 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=78.2
Q ss_pred eeccCCCCCCCCCHHHHHHHHh-cc--CCCCCCCc---ChHHH---HHHHH-----HHcCCCCC----CEEEeCCHHHHH
Q 025730 98 VKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP---ESRRL---RAALA-----KDSGLESD----HILVGCGADELI 159 (249)
Q Consensus 98 I~L~~~~~~~~~p~~v~~al~~-~~--~~~~Yp~~---g~~~l---r~~la-----~~~~~~~~----~I~vt~Ga~~~l 159 (249)
|.|=..||- ++..|++++.. +. +.-+||.. |-.++ .|.|+ +.|+++++ +|-.-+| +.+.
T Consensus 43 ieLIaSENF--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SG-SPAN 119 (477)
T KOG2467|consen 43 IELIASENF--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSG-SPAN 119 (477)
T ss_pred eeEeecccc--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCC-Cchh
Confidence 666566664 56788899876 32 22344421 11122 22222 23577765 3444444 5577
Q ss_pred HHHHHHhcCCCCeEEEcC---CCCh--hHHHHHHHCCCEEEEe---c--CC-CCCCCCHHHHHHhhccCCceEEEEcCCC
Q 025730 160 DLIMRCVLDPGDKIVDCP---PTFT--MYEFDAAVNGAAVVKV---P--RK-SDFSLNVELIADAVEREKPKCIFLTSPN 228 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vlv~~---P~y~--~~~~~~~~~G~~v~~v---~--~~-~~~~id~e~l~~~i~~~~~k~i~l~~Pn 228 (249)
..+..+++.|+|++.-.+ -+|. .|....+.-.+.-++. | .+ ..+-||.|.|++....-++|+|+--
T Consensus 120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG--- 196 (477)
T KOG2467|consen 120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAG--- 196 (477)
T ss_pred hHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEec---
Confidence 788889999999998433 2332 2222212222222222 2 23 4567899999998776889988832
Q ss_pred CccccCCChH---HHHHHHhhhh
Q 025730 229 NPDGRFSWTS---SWIWGISSEH 248 (249)
Q Consensus 229 NPTG~~~~~~---e~i~~i~~~~ 248 (249)
+..|++. .....||++.
T Consensus 197 ---~SaY~R~~DYaR~R~Iad~~ 216 (477)
T KOG2467|consen 197 ---TSAYSRLIDYARFRKIADKV 216 (477)
T ss_pred ---cccchhhccHHHHHHHHHhc
Confidence 1223332 4566677654
No 385
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=76.34 E-value=11 Score=33.51 Aligned_cols=85 Identities=15% Similarity=0.215 Sum_probs=54.3
Q ss_pred CCeeeccCCCCC-CCCCHHHHHHHHh-cc-CC-----CCC--CCcC-hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHH
Q 025730 95 EDIVKIDANENP-YGPPPEVREALGQ-LK-FP-----YIY--PDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (249)
Q Consensus 95 ~~~I~L~~~~~~-~~~p~~v~~al~~-~~-~~-----~~Y--p~~g-~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~ 163 (249)
+++++|..|.-. +...|++.++-.+ +. ++ .++ .... ...|...||++++ .++.++-+.+-.+..-++
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--rED~ilypscfdANag~f 144 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--REDTILYPSCFDANAGAF 144 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--CCceEEeccccccchHHH
Confidence 567777765432 2344677665543 21 11 112 1122 4568889999998 566777777788888888
Q ss_pred HHhcCCCCeEEEcCCCCh
Q 025730 164 RCVLDPGDKIVDCPPTFT 181 (249)
Q Consensus 164 ~~~~~pGd~Vlv~~P~y~ 181 (249)
-+++.|.|.|+-..-.+.
T Consensus 145 eail~pedAvfSDeLNhA 162 (417)
T KOG1359|consen 145 EAILTPEDAVFSDELNHA 162 (417)
T ss_pred HHhcChhhhhhccccccc
Confidence 888899888876655554
No 386
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=75.88 E-value=27 Score=28.94 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=35.2
Q ss_pred HHHHHHhcCCCCeEE-EcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCC
Q 025730 160 DLIMRCVLDPGDKIV-DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (249)
Q Consensus 160 ~~~~~~~~~pGd~Vl-v~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnN 229 (249)
..++..+++.|-+|. +..+.-.......+..|++++..+.+ |.+.|.++++ +...|+++.+.+
T Consensus 12 ~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~--g~d~v~~~~~~~ 75 (233)
T PF05368_consen 12 RSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALK--GVDAVFSVTPPS 75 (233)
T ss_dssp HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHT--TCSEEEEESSCS
T ss_pred HHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-----CHHHHHHHHc--CCceEEeecCcc
Confidence 344445555664443 33333222333445579988866543 7899999886 566677665543
No 387
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=71.77 E-value=16 Score=34.34 Aligned_cols=77 Identities=9% Similarity=0.098 Sum_probs=56.0
Q ss_pred eEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCc----eEEEEcCCCCccccC-CChHHHHHHHhh
Q 025730 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP----KCIFLTSPNNPDGRF-SWTSSWIWGISS 246 (249)
Q Consensus 172 ~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~----k~i~l~~PnNPTG~~-~~~~e~i~~i~~ 246 (249)
.+.+.+-++......+...|+++..++.+.+++++.+.|.+++++... -.+++.+-.. ||.+ ++..+.+.-||+
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GT-T~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGT-TSSCAFDELEELGPVCR 262 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecC-ccccccccHHHhcchhh
Confidence 355778888899999999999999999888999999999999975332 2334344432 3433 234467888898
Q ss_pred hhC
Q 025730 247 EHN 249 (249)
Q Consensus 247 ~~~ 249 (249)
++|
T Consensus 263 ~~g 265 (511)
T KOG0628|consen 263 EEG 265 (511)
T ss_pred hcC
Confidence 875
No 388
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=70.47 E-value=56 Score=30.26 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=51.6
Q ss_pred CCHHHHHHHHh-c---cC-CCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh---cCCCCeEEEcCCCC
Q 025730 109 PPPEVREALGQ-L---KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTF 180 (249)
Q Consensus 109 ~p~~v~~al~~-~---~~-~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~---~~pGd~Vlv~~P~y 180 (249)
..|++.+++.+ + .. ...|-.+-..+|-++|+..+.-+-+-++++|+++|+.+++++.. .+.-|-|..-.-.|
T Consensus 67 chP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YH 146 (442)
T KOG1404|consen 67 CHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYH 146 (442)
T ss_pred CChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeecccc
Confidence 34677777654 3 11 24565556789999999998655567999999999999988754 22334444444444
Q ss_pred hhHHHHHHH
Q 025730 181 TMYEFDAAV 189 (249)
Q Consensus 181 ~~~~~~~~~ 189 (249)
......+..
T Consensus 147 G~t~~t~gl 155 (442)
T KOG1404|consen 147 GNTLYTLGL 155 (442)
T ss_pred CCchhhccc
Confidence 443333333
No 389
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=69.32 E-value=11 Score=33.89 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=80.4
Q ss_pred ChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCC---CeEEEcCCCCh----hHHHHHHHCCCEEE----Eec
Q 025730 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG---DKIVDCPPTFT----MYEFDAAVNGAAVV----KVP 198 (249)
Q Consensus 130 g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pG---d~Vlv~~P~y~----~~~~~~~~~G~~v~----~v~ 198 (249)
........+++..|...++|.+.|.-+--|..++..+.+|- =+|+.+.-.|+ .....++..|..+. .+.
T Consensus 112 ~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ie 191 (465)
T KOG3846|consen 112 IDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIE 191 (465)
T ss_pred cchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEec
Confidence 34567788889999999999999999999999999998875 36887777665 45566777887642 232
Q ss_pred -CCCCCCCCHHHHHHhhccC--CceEEEEcCCCCccccCCChH
Q 025730 199 -RKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGRFSWTS 238 (249)
Q Consensus 199 -~~~~~~id~e~l~~~i~~~--~~k~i~l~~PnNPTG~~~~~~ 238 (249)
.+.+..+-.++|.+.|+.. ...+|+++-.+.=||+.++..
T Consensus 192 PREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~ 234 (465)
T KOG3846|consen 192 PREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIG 234 (465)
T ss_pred ccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchh
Confidence 3344456778888887642 356777778899999987544
No 390
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=68.38 E-value=28 Score=31.57 Aligned_cols=137 Identities=17% Similarity=0.121 Sum_probs=77.3
Q ss_pred CCCCCCHHHHHHHHh-ccC-----CCCCCCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHh------cC--CC
Q 025730 105 NPYGPPPEVREALGQ-LKF-----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV------LD--PG 170 (249)
Q Consensus 105 ~~~~~p~~v~~al~~-~~~-----~~~Yp~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~------~~--pG 170 (249)
|.-...|.+.+++++ .+. ...|-+ -..++.+-+.++++. +-|+-++-+.|+.+.++... .+ |.
T Consensus 72 nqGhchpki~~aLqeq~~kLtlssrafYnd-~~~~f~~~vt~lf~~--~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~ 148 (427)
T KOG1402|consen 72 NQGHCHPKIIKALQEQADKLTLSSRAFYND-VLGEFAEYVTKLFGY--DKVLPMNTGAEAVETACKLARKWGYRKKNIPK 148 (427)
T ss_pred ccCCCCHHHHHHHHHHHhHhhhhhHHHhhh-hHHHHHHHHHHhcCc--ceeeecccchhHHHHHHHHHHHHHHhhccCCc
Confidence 333456788888875 221 123332 256778888888884 45777777788888777643 11 32
Q ss_pred C--eEEEc-CCCChhHH---------HHHHHCCC----EEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccC
Q 025730 171 D--KIVDC-PPTFTMYE---------FDAAVNGA----AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234 (249)
Q Consensus 171 d--~Vlv~-~P~y~~~~---------~~~~~~G~----~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~ 234 (249)
| +|+.. +..|.... ...+.+|- .+..||. =|.++++.++++.+..++++.--+---|++
T Consensus 149 nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-----~d~eale~~l~~~~vaaFivEPIQGEaGVv 223 (427)
T KOG1402|consen 149 NKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-----GDAEALEVALKSPNVAAFIVEPIQGEAGVV 223 (427)
T ss_pred cceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-----CCHHHHHHHhcCCCeeEEEeeccccccceE
Confidence 2 23322 22222110 01111111 1122222 178999999986555555543337788999
Q ss_pred CChH---HHHHHHhhhhC
Q 025730 235 SWTS---SWIWGISSEHN 249 (249)
Q Consensus 235 ~~~~---e~i~~i~~~~~ 249 (249)
+++. ....++|.+||
T Consensus 224 vP~~GYL~~vreLCtkyn 241 (427)
T KOG1402|consen 224 VPPPGYLKKVRELCTKYN 241 (427)
T ss_pred eCCchhHHHHHHHHHhhc
Confidence 8887 45788999986
No 391
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=68.01 E-value=54 Score=27.80 Aligned_cols=93 Identities=11% Similarity=0.089 Sum_probs=57.1
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEEE----cCC--CC-------hhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhc
Q 025730 149 ILVGCGADELIDLIMRCVLDPGDKIVD----CPP--TF-------TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pGd~Vlv----~~P--~y-------~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~ 215 (249)
++.-+|+.++...+..+.-+ -+.+.+ +.. .| ......++..|..++.++......--.+++.++++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l~ 82 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGILH 82 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHHH
Confidence 45668888888888877655 433222 111 11 23445667789988776643333334677777776
Q ss_pred cCCceEEEEcCCCCccccCCChH--HHHHHHhhhhC
Q 025730 216 REKPKCIFLTSPNNPDGRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 216 ~~~~k~i~l~~PnNPTG~~~~~~--e~i~~i~~~~~ 249 (249)
+.++..|+ +|-+.... .++..+|.+.|
T Consensus 83 ~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lg 111 (223)
T TIGR00290 83 TLDVEAVV-------FGAIYSEYQKTRIERVCRELG 111 (223)
T ss_pred HcCCCEEE-------ECCcccHHHHHHHHHHHHhcC
Confidence 55677776 78776655 45777777643
No 392
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=67.31 E-value=53 Score=27.59 Aligned_cols=85 Identities=13% Similarity=0.144 Sum_probs=51.8
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEecC--CCCCCCCHHHHHHhhccC
Q 025730 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE 217 (249)
Q Consensus 142 ~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~--~~~~~id~e~l~~~i~~~ 217 (249)
+|+. .++...+..++|...+.....+|++|+++...-. ......+..|+.+..+.. ...-..+.+.+.+.+.+.
T Consensus 92 ~G~~--~~~~~~~~~e~L~~~~~~~~~~~~~vL~~rg~~~r~~l~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~ 169 (240)
T PRK09189 92 LGFR--HVIEGGGDGVRLAETVAAALAPTARLLYLAGRPRAPVFEDRLAAAGIPFRVAECYDMLPVMYSPATLSAILGGA 169 (240)
T ss_pred cCCC--CCcCCCCCHHHHHHHHHHhcCCCCcEEEeccCcccchhHHHHHhCCCeeEEEEEEEeecCCCChHHHHHHHhcC
Confidence 4654 2344456666665555443457788888766543 345556668888877662 111223456677777656
Q ss_pred CceEEEEcCCC
Q 025730 218 KPKCIFLTSPN 228 (249)
Q Consensus 218 ~~k~i~l~~Pn 228 (249)
+...|++.+|.
T Consensus 170 ~~d~i~f~S~~ 180 (240)
T PRK09189 170 PFDAVLLYSRV 180 (240)
T ss_pred CCCEEEEeCHH
Confidence 78888888874
No 393
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=64.37 E-value=81 Score=26.38 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=24.7
Q ss_pred HHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhhh
Q 025730 209 LIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISSE 247 (249)
Q Consensus 209 ~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~~ 247 (249)
+|.+++.+.+..+|+=--..|+||.-+-+...+-.+|.+
T Consensus 127 ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 127 KIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred HHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 344444433445544224679999998888877777754
No 394
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=63.60 E-value=42 Score=30.68 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=47.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC--hhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEE
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y--~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l 224 (249)
+.|+..+++..++.+++.+- .-|=++.+.-|.. ..-....+.+|++++.++...+..-..+...+.++ .+...+++
T Consensus 112 ~~vV~aSsGN~G~alA~~a~-~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~-~~~~~~~~ 189 (368)
T PLN02556 112 TTLIEPTSGNMGISLAFMAA-MKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLE-STPDAFML 189 (368)
T ss_pred CEEEEeCCchHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHH-hcCCCCcc
Confidence 35777778888888777653 2353333334444 45556777799999998742222223444444444 33455554
Q ss_pred cCCCCccc
Q 025730 225 TSPNNPDG 232 (249)
Q Consensus 225 ~~PnNPTG 232 (249)
+.-+||.+
T Consensus 190 ~q~~np~~ 197 (368)
T PLN02556 190 QQFSNPAN 197 (368)
T ss_pred CCCCCHHH
Confidence 43356644
No 395
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=63.35 E-value=35 Score=31.09 Aligned_cols=56 Identities=27% Similarity=0.403 Sum_probs=41.6
Q ss_pred CCCCeEEEcCCCCh-hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC-CCCcc
Q 025730 168 DPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS-PNNPD 231 (249)
Q Consensus 168 ~pGd~Vlv~~P~y~-~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~-PnNPT 231 (249)
+++.+|++.+-..- .........|+++.-||.+ .+.+++.+ .+++.|||+| |.+|.
T Consensus 177 ~~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~----t~~eeIl~----~~pDGiflSNGPGDP~ 234 (368)
T COG0505 177 EPGKHVVVIDFGVKRNILRELVKRGCRVTVVPAD----TSAEEILA----LNPDGIFLSNGPGDPA 234 (368)
T ss_pred CCCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC----CCHHHHHh----hCCCEEEEeCCCCChh
Confidence 45678888887764 4555555689999999963 35677655 5788999997 89993
No 396
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=63.32 E-value=1.2e+02 Score=31.04 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=40.2
Q ss_pred CeeeccCC--CCCCC--CCHHHHHHHHh-ccCC-CC----CCCcChHHHHHHHHHHcCCC-CCCEEEeCCHHHHHHHHHH
Q 025730 96 DIVKIDAN--ENPYG--PPPEVREALGQ-LKFP-YI----YPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR 164 (249)
Q Consensus 96 ~~I~L~~~--~~~~~--~p~~v~~al~~-~~~~-~~----Yp~~g~~~lr~~la~~~~~~-~~~I~vt~Ga~~~l~~~~~ 164 (249)
..+|+..+ ...++ ..+++.+++.+ +... +. |......+|-+.|++..+-. .+.|+++++++++++.+++
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlK 445 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALK 445 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHH
Confidence 35565544 22333 36788888875 3321 11 12122344555555533311 3579999999999998877
Q ss_pred Hh
Q 025730 165 CV 166 (249)
Q Consensus 165 ~~ 166 (249)
..
T Consensus 446 mA 447 (817)
T PLN02974 446 MA 447 (817)
T ss_pred HH
Confidence 44
No 397
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=63.28 E-value=70 Score=27.11 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=54.8
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEE--Ec-----------CCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhc
Q 025730 149 ILVGCGADELIDLIMRCVLDPGDKIV--DC-----------PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pGd~Vl--v~-----------~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~ 215 (249)
++.-+|+.++...+..++-+ .+.+. +. .+.+......++..|..++.+.......--.+++.+.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~~e~~~~~l~~~l~ 82 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGEEEKEVEDLAGQLG 82 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCchhHHHHHHHHHHH
Confidence 34567777777766665443 33222 11 112224456677789887777643333334566666665
Q ss_pred cCCceEEEEcCCCCccccCCChH--HHHHHHhhhhC
Q 025730 216 REKPKCIFLTSPNNPDGRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 216 ~~~~k~i~l~~PnNPTG~~~~~~--e~i~~i~~~~~ 249 (249)
+.++..|+ +|-+.+.. .++..+|++.|
T Consensus 83 ~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~g 111 (222)
T TIGR00289 83 ELDVEALC-------IGAIESNYQKSRIDKVCRELG 111 (222)
T ss_pred HcCCCEEE-------ECccccHHHHHHHHHHHHHcC
Confidence 45677777 78876665 55778887654
No 398
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=62.76 E-value=98 Score=28.81 Aligned_cols=156 Identities=13% Similarity=0.167 Sum_probs=82.9
Q ss_pred CCCeeeccCCCC--CC-CCCHHHHHHHHh-cc-CC---CCCCCcChHHHHHHHHHHcC-CCCCCEEEeCCHHHHHHHHHH
Q 025730 94 PEDIVKIDANEN--PY-GPPPEVREALGQ-LK-FP---YIYPDPESRRLRAALAKDSG-LESDHILVGCGADELIDLIMR 164 (249)
Q Consensus 94 ~~~~I~L~~~~~--~~-~~p~~v~~al~~-~~-~~---~~Yp~~g~~~lr~~la~~~~-~~~~~I~vt~Ga~~~l~~~~~ 164 (249)
..+.||+-.+-- -+ ...|++.+++.. +. .. ..|-.-..-++.+.+.+..+ -..+.|.+.++++++.+.++.
T Consensus 55 g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK 134 (433)
T KOG1401|consen 55 GKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALK 134 (433)
T ss_pred cceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHH
Confidence 445677755421 11 235788888865 22 11 22211113455556665553 257889999999999999887
Q ss_pred HhcC------CCC--eEEEcCCCChhHH-HHHHHCCCEEEEecC---CCC----CCCCHHHHHHhhccCC--ceEEEEcC
Q 025730 165 CVLD------PGD--KIVDCPPTFTMYE-FDAAVNGAAVVKVPR---KSD----FSLNVELIADAVEREK--PKCIFLTS 226 (249)
Q Consensus 165 ~~~~------pGd--~Vlv~~P~y~~~~-~~~~~~G~~v~~v~~---~~~----~~id~e~l~~~i~~~~--~k~i~l~~ 226 (249)
...+ +-+ +++...-+|..-. ......+..-...|. ..+ --=|..++++.++.++ +.+|++--
T Consensus 135 ~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEP 214 (433)
T KOG1401|consen 135 FARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEP 214 (433)
T ss_pred HHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEec
Confidence 5422 112 3777777775322 222222222222221 111 1126888888887543 55666443
Q ss_pred CCCccccCCChHHH---HHHHhhhhC
Q 025730 227 PNNPDGRFSWTSSW---IWGISSEHN 249 (249)
Q Consensus 227 PnNPTG~~~~~~e~---i~~i~~~~~ 249 (249)
-.---|....+.+. ++.+|+++|
T Consensus 215 iqGaGG~~p~~peFl~~L~k~C~~~~ 240 (433)
T KOG1401|consen 215 IQGAGGIIPADPEFLIGLRKECDDNG 240 (433)
T ss_pred ccCCCCcccCCHHHHHHHHHHHhhcC
Confidence 34445555333333 677888765
No 399
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=61.71 E-value=70 Score=26.82 Aligned_cols=48 Identities=19% Similarity=0.229 Sum_probs=34.8
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC-hhHHHHHHHCC
Q 025730 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDAAVNG 191 (249)
Q Consensus 143 ~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y-~~~~~~~~~~G 191 (249)
.++...|++..|+..+..-+-. +++.|..|.+..|.+ .......+..+
T Consensus 9 ~l~~k~VlvvGgG~va~rKa~~-ll~~ga~v~Vvs~~~~~el~~~~~~~~ 57 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKARL-LLKAGADVTVVSPEFEPELKALIEEGK 57 (210)
T ss_pred EcCCCEEEEECCCHHHHHHHHH-HHhcCCEEEEEcCCccHHHHHHHHhcC
Confidence 3455678888888888876654 678899999999999 44555555444
No 400
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=60.91 E-value=41 Score=28.38 Aligned_cols=93 Identities=14% Similarity=0.216 Sum_probs=50.6
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEE----E---------cCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhc
Q 025730 149 ILVGCGADELIDLIMRCVLDPGDKIV----D---------CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pGd~Vl----v---------~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~ 215 (249)
++.-+|+.++...+.+++-+ .+.+. + -.+........++..|..++.++......--.+++.++++
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~~~~~~l~~~l~ 82 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEEDYVEDLKEALK 82 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CCCHHHHHHHHHC
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccchhhHHHHHHHH
Confidence 45667888888777776644 33211 1 1111124566778899999888854332334688888887
Q ss_pred cCCceEEEEcCCCCccccCCChH--HHHHHHhhhhC
Q 025730 216 REKPKCIFLTSPNNPDGRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 216 ~~~~k~i~l~~PnNPTG~~~~~~--e~i~~i~~~~~ 249 (249)
+-++..++ +|-+.... .++..+|.+.|
T Consensus 83 ~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lG 111 (218)
T PF01902_consen 83 ELKVEAVV-------FGDIDSEYQRNWVERVCERLG 111 (218)
T ss_dssp TC--SEEE---------TTS-HHHHHHHHHHHHHCT
T ss_pred HcCCCEEE-------ECcCCcHHHHHHHHHHHHHcC
Confidence 66777777 78776554 56788887754
No 401
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=58.75 E-value=1.1e+02 Score=28.64 Aligned_cols=94 Identities=21% Similarity=0.291 Sum_probs=61.9
Q ss_pred HHHHHHHHcC-CCCCCEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCChhHHHHHHHCCCEEEEecC------------
Q 025730 134 LRAALAKDSG-LESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPR------------ 199 (249)
Q Consensus 134 lr~~la~~~~-~~~~~I~vt~Ga~~~l~~~~~~~~~pG-d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~------------ 199 (249)
..+...+.++ +....+++ -|+.+...+++..+...| ..|.+.+=++..-...++..|++++.+..
T Consensus 165 Av~lA~~~~~~L~~~~vlv-IGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVi 243 (414)
T COG0373 165 AVELAKRIFGSLKDKKVLV-IGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVI 243 (414)
T ss_pred HHHHHHHHhcccccCeEEE-EcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEE
Confidence 3344444555 54444443 455566777888888888 89999999999888888888877776651
Q ss_pred ----CCCCCCCHHHHHHhhccCCceEEE--EcCCCC
Q 025730 200 ----KSDFSLNVELIADAVEREKPKCIF--LTSPNN 229 (249)
Q Consensus 200 ----~~~~~id~e~l~~~i~~~~~k~i~--l~~PnN 229 (249)
...+-+..+.++.++.. +-++++ |.+|-|
T Consensus 244 ssTsa~~~ii~~~~ve~a~~~-r~~~livDiavPRd 278 (414)
T COG0373 244 SSTSAPHPIITREMVERALKI-RKRLLIVDIAVPRD 278 (414)
T ss_pred EecCCCccccCHHHHHHHHhc-ccCeEEEEecCCCC
Confidence 12356677888888873 333333 557743
No 402
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed
Probab=58.54 E-value=63 Score=26.82 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=49.4
Q ss_pred HHHHHHHcCCCCCCEEEeCCH-HHHHHHHHHHhcCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEecCCC--CCCCCHHH
Q 025730 135 RAALAKDSGLESDHILVGCGA-DELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS--DFSLNVEL 209 (249)
Q Consensus 135 r~~la~~~~~~~~~I~vt~Ga-~~~l~~~~~~~~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~~--~~~id~e~ 209 (249)
.+++. -+|+..+. +...+. .+.+..+.... ..|.+|+++.+.-. ......+..|+++..++.-. ....+.+.
T Consensus 92 a~~l~-~~G~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~ili~~~~~~~~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~ 168 (249)
T PRK05928 92 ALALK-KLGGKVVF-VPEDGESSELLLELPELL-LKGKRVLYLRGNGGREVLGDTLEERGAEVDECEVYERVPPKLDGAE 168 (249)
T ss_pred HHHHH-HcCCCccc-cCCCCcChHHHHhChhhh-cCCCEEEEECCCCCHHHHHHHHHHCCCEEeEEEEEEeeCCCCChHH
Confidence 33443 35654432 223334 44444333322 35789999887764 35556666899988887211 11122333
Q ss_pred HHHhhccCCceEEEEcCCCC
Q 025730 210 IADAVEREKPKCIFLTSPNN 229 (249)
Q Consensus 210 l~~~i~~~~~k~i~l~~PnN 229 (249)
....+.+.+...|++++|+.
T Consensus 169 ~~~~~~~~~~d~ivftS~~~ 188 (249)
T PRK05928 169 LLARLQSGEVDAVIFTSPST 188 (249)
T ss_pred HHHHHHhCCCCEEEECCHHH
Confidence 33333235788899898863
No 403
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=54.88 E-value=43 Score=28.87 Aligned_cols=75 Identities=20% Similarity=0.163 Sum_probs=42.9
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCC-CHHHHHHhhccCCceEEEEcC
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-NVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~i-d~e~l~~~i~~~~~k~i~l~~ 226 (249)
+|++-.|++++-.++-. +.+.|. |++..-+- |......-......+- .+.+ |.+.|++.+++.++++|+ .
T Consensus 2 ~ILvlgGTtE~r~la~~-L~~~g~-v~~sv~t~--~g~~~~~~~~~~~~v~---~G~lg~~~~l~~~l~~~~i~~vI--D 72 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAER-LAEAGY-VIVSVATS--YGGELLKPELPGLEVR---VGRLGDEEGLAEFLRENGIDAVI--D 72 (249)
T ss_pred EEEEEechHHHHHHHHH-HHhcCC-EEEEEEhh--hhHhhhccccCCceEE---ECCCCCHHHHHHHHHhCCCcEEE--E
Confidence 58888999999877765 556666 55443222 1111111110111111 1356 899999999877888776 3
Q ss_pred CCCcc
Q 025730 227 PNNPD 231 (249)
Q Consensus 227 PnNPT 231 (249)
.++|.
T Consensus 73 ATHPf 77 (249)
T PF02571_consen 73 ATHPF 77 (249)
T ss_pred CCCch
Confidence 44443
No 404
>cd06578 HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.
Probab=53.92 E-value=84 Score=25.70 Aligned_cols=86 Identities=17% Similarity=0.131 Sum_probs=45.8
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC--hhHHHHHHHCCCEEEEecC-CCCCCCCHHHHHHhhccCC
Q 025730 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREK 218 (249)
Q Consensus 142 ~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y--~~~~~~~~~~G~~v~~v~~-~~~~~id~e~l~~~i~~~~ 218 (249)
.|+....+ ...+..+.|..++...-..|..|++....- ..+....+..|+++..++. .....-+.+...+.+++..
T Consensus 95 ~g~~~~~~-~~~~~~~~L~~~i~~~~~~~~~il~~~g~~~~~~l~~~L~~~g~~v~~~~~Y~~~~~~~~~~~~~~l~~~~ 173 (239)
T cd06578 95 AGLTADFV-PEEGDSEGLLELLELQDGKGKRILRPRGGRAREDLAEALRERGAEVDEVEVYRTVPPDLDAELLELLEEGA 173 (239)
T ss_pred cCCCceeC-CCccCHHHHHHHHHhcCCCCCEEEEEcCcchhHHHHHHHHHCCCEEEEEEEEEEECCCCcHHHHHHHHcCC
Confidence 45544333 233444444444433323567888776554 3555666668999888872 1111112244555555344
Q ss_pred ceEEEEcCCC
Q 025730 219 PKCIFLTSPN 228 (249)
Q Consensus 219 ~k~i~l~~Pn 228 (249)
...|++++|+
T Consensus 174 ~~~iiftS~~ 183 (239)
T cd06578 174 IDAVLFTSPS 183 (239)
T ss_pred CcEEEEeCHH
Confidence 4578888876
No 405
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=53.60 E-value=1.4e+02 Score=25.34 Aligned_cols=76 Identities=16% Similarity=0.102 Sum_probs=51.2
Q ss_pred eCCHHHHHHHHHHHhcCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEecCC--CCCCCCHHHHHHhhccCCceEEEEcCC
Q 025730 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSP 227 (249)
Q Consensus 152 t~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~--~~~~id~e~l~~~i~~~~~k~i~l~~P 227 (249)
..|..+++...+......|++|++....-. .........|+++..++.- ..-..+.+.+...+...+.++|+++++
T Consensus 105 ~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~~~d~v~ftS~ 184 (248)
T COG1587 105 EDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEERGAEVREVEVYRTEPPPLDEATLIELLKLGEVDAVVFTSS 184 (248)
T ss_pred CccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhCCCEEEEEeeeeecCCCccHHHHHHHHHhCCCCEEEEeCH
Confidence 467787888777777666889988766554 3555556689999888731 112233555555666567888888876
No 406
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=52.88 E-value=17 Score=25.86 Aligned_cols=26 Identities=31% Similarity=0.493 Sum_probs=20.4
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEe
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVG 152 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt 152 (249)
|.+.-.++++.||+.++++++.|++-
T Consensus 11 ~Tpsr~ei~~klA~~~~~~~~~ivv~ 36 (84)
T PF01282_consen 11 PTPSRKEIREKLAAMLNVDPDLIVVF 36 (84)
T ss_dssp SS--HHHHHHHHHHHHTSTGCCEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCCCeEEEe
Confidence 34456889999999999999988863
No 407
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=51.87 E-value=25 Score=27.66 Aligned_cols=42 Identities=12% Similarity=0.105 Sum_probs=34.5
Q ss_pred CCHHHHHHhhccCCceEEEEcCCCCccccCCChHHHHHHHhh
Q 025730 205 LNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIWGISS 246 (249)
Q Consensus 205 id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~~~e~i~~i~~ 246 (249)
.|++.+.+.+++.++..|++-.|.|..|...+..+....+++
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~ 81 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAE 81 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHH
Confidence 589999999988899999999999999999775555555544
No 408
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=51.01 E-value=1.4e+02 Score=27.28 Aligned_cols=102 Identities=8% Similarity=0.003 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHcCCCCC-CEEEe-CCHHHHHHHHHHHhcCCCCeEEEcCCCCh--hHHHHHHHCCC--EEEEec-CCCC-
Q 025730 131 SRRLRAALAKDSGLESD-HILVG-CGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGA--AVVKVP-RKSD- 202 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~-~I~vt-~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~--~~~~~~~~~G~--~v~~v~-~~~~- 202 (249)
..+.++.+++.++++.+ .|++. .|++..+.++...++.....-.+..-.|. .+... +..+- ++.... ...+
T Consensus 52 ~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA-~~~~~~~~~~~~~~~~~~~ 130 (365)
T COG1932 52 LEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEA-KKVGKQPKLIDARIEEAGY 130 (365)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHH-HHhcccccccccceeccCc
Confidence 45677888888999766 56654 55688888888888866533133344454 33333 22332 222222 1122
Q ss_pred -CCCCHHHHHHhhccCCceEEEEcCCCCccccCCC
Q 025730 203 -FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236 (249)
Q Consensus 203 -~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~ 236 (249)
.-++++.+. +. .+...|++|+=+.-+|+-++
T Consensus 131 ~~iP~~~~~~--~~-~~~ayv~~~~NeTi~Gv~v~ 162 (365)
T COG1932 131 GSIPDLSKWD--FS-DNDAYVHFCWNETISGVEVP 162 (365)
T ss_pred cCCCChhhcc--cC-CCccEEEEecCCcccceEcc
Confidence 223444443 22 22334666655555676554
No 409
>PF12846 AAA_10: AAA-like domain
Probab=50.99 E-value=45 Score=28.37 Aligned_cols=54 Identities=20% Similarity=0.309 Sum_probs=41.1
Q ss_pred eCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCC
Q 025730 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206 (249)
Q Consensus 152 t~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id 206 (249)
+.|=|..+..++..++..|..+++.+|. ..|...++..|.+++.+.......+|
T Consensus 11 GsGKT~~~~~l~~~~~~~g~~~~i~D~~-g~~~~~~~~~~~~~i~~~~~~~~~~n 64 (304)
T PF12846_consen 11 GSGKTTLLKNLLEQLIRRGPRVVIFDPK-GDYSPLARALGGQYIDIDPGDPGSIN 64 (304)
T ss_pred CCcHHHHHHHHHHHHHHcCCCEEEEcCC-chHHHHHHhcCceEEEeecCCCCccC
Confidence 4566777777777788889999999998 77777888889998877754434444
No 410
>PRK10892 D-arabinose 5-phosphate isomerase; Provisional
Probab=49.92 E-value=99 Score=27.28 Aligned_cols=85 Identities=16% Similarity=0.146 Sum_probs=42.0
Q ss_pred EEEeCCHHHHHHHHH-HHhcCCCCeEEEcCCCChhHHHHHHH-CCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEc-
Q 025730 149 ILVGCGADELIDLIM-RCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT- 225 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~-~~~~~pGd~Vlv~~P~y~~~~~~~~~-~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~- 225 (249)
++++.|++..+..-+ ..+..-|..+....+.+..+...... .+--++.+... +..-++-+..+.+++.+.+.|.|+
T Consensus 51 ~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~~I~iS~s-G~t~~~~~~~~~ak~~g~~vi~iT~ 129 (326)
T PRK10892 51 VVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNS-GESSEILALIPVLKRLHVPLICITG 129 (326)
T ss_pred EEEeCcHhHHHHHHHHHHHhcCCceeEEeChHHhhccccccCCCCCEEEEEeCC-CCCHHHHHHHHHHHHCCCcEEEEEC
Confidence 445777665554333 33455666666654443322111111 23334444432 223334444444444677888877
Q ss_pred CCCCccccC
Q 025730 226 SPNNPDGRF 234 (249)
Q Consensus 226 ~PnNPTG~~ 234 (249)
+++||.+..
T Consensus 130 ~~~s~la~~ 138 (326)
T PRK10892 130 RPESSMARA 138 (326)
T ss_pred CCCCccccc
Confidence 577777643
No 411
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=47.09 E-value=2.1e+02 Score=25.40 Aligned_cols=83 Identities=14% Similarity=0.128 Sum_probs=44.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCC--eEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEE
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd--~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l 224 (249)
..|+..+++..+..++..+- .-|= .|+++.-.-..-....+.+|++++.++.+ +.-+...+.+.+.+......|+
T Consensus 52 ~~vv~aSsGN~g~alA~~a~-~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 128 (316)
T cd06448 52 VHVVCSSGGNAGLAAAYAAR-KLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV--WWEADNYLREELAENDPGPVYV 128 (316)
T ss_pred CeEEEeCCcHHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc--hHHHHHHHHHHHHhccCCcEEe
Confidence 45666667777777766543 2343 34444433334566777799999998742 1111223333343232245565
Q ss_pred cCCCCccc
Q 025730 225 TSPNNPDG 232 (249)
Q Consensus 225 ~~PnNPTG 232 (249)
..-+||.+
T Consensus 129 ~~~~n~~~ 136 (316)
T cd06448 129 HPFDDPLI 136 (316)
T ss_pred CCCCCchh
Confidence 43345554
No 412
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=46.95 E-value=1.1e+02 Score=22.43 Aligned_cols=9 Identities=33% Similarity=0.364 Sum_probs=4.3
Q ss_pred CCceEEEEc
Q 025730 217 EKPKCIFLT 225 (249)
Q Consensus 217 ~~~k~i~l~ 225 (249)
.+.+.|.|+
T Consensus 86 ~g~~iv~iT 94 (139)
T cd05013 86 RGAKVIAIT 94 (139)
T ss_pred cCCeEEEEc
Confidence 344555444
No 413
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=46.29 E-value=82 Score=23.97 Aligned_cols=42 Identities=19% Similarity=0.439 Sum_probs=31.2
Q ss_pred CCEEEEecCCCCCCCCHHHHHHhhccCCceEEEE--cCC---CCccccCC
Q 025730 191 GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL--TSP---NNPDGRFS 235 (249)
Q Consensus 191 G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l--~~P---nNPTG~~~ 235 (249)
+.+++.||. .+.+|++.+.+++. ...+.|++ |.| |+..|...
T Consensus 28 ~vriIrvpC--~Grv~~~~il~Af~-~GADGV~V~gC~~g~Ch~~~Gn~~ 74 (124)
T PF02662_consen 28 NVRIIRVPC--SGRVDPEFILRAFE-KGADGVLVAGCHPGDCHYREGNYR 74 (124)
T ss_pred CeEEEEccC--CCccCHHHHHHHHH-cCCCEEEEeCCCCCCCCcchhhHH
Confidence 356777775 36799999999998 67888887 354 56788774
No 414
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=46.26 E-value=1.9e+02 Score=25.04 Aligned_cols=28 Identities=21% Similarity=0.168 Sum_probs=13.6
Q ss_pred EEEeCCHHHHHHHHH-HHhcCCCCeEEEc
Q 025730 149 ILVGCGADELIDLIM-RCVLDPGDKIVDC 176 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~-~~~~~pGd~Vlv~ 176 (249)
.+++.|++..+..-+ ..+.+.|-.+.+.
T Consensus 144 ~i~G~G~S~~~A~~l~~~l~~~g~~~~~~ 172 (292)
T PRK11337 144 DLYGAGGSAAIARDVQHKFLRIGVRCQAY 172 (292)
T ss_pred EEEEecHHHHHHHHHHHHHhhCCCeEEEc
Confidence 356777665544333 2334445444433
No 415
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=46.13 E-value=94 Score=24.14 Aligned_cols=36 Identities=22% Similarity=0.156 Sum_probs=16.4
Q ss_pred HHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 187 ~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
.+.+|.+++.... ...++++.+++.+.++.+|.+++
T Consensus 25 l~~~GfeVi~LG~----~v~~e~~v~aa~~~~adiVglS~ 60 (134)
T TIGR01501 25 FTNAGFNVVNLGV----LSPQEEFIKAAIETKADAILVSS 60 (134)
T ss_pred HHHCCCEEEECCC----CCCHHHHHHHHHHcCCCEEEEec
Confidence 3445555555432 12344444444434555555443
No 416
>PRK07239 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; Validated
Probab=45.74 E-value=1.3e+02 Score=27.21 Aligned_cols=87 Identities=16% Similarity=0.121 Sum_probs=51.4
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC----C---hhHHHHHHHCCCEEEEecCCCCCCC-C---HHHH
Q 025730 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT----F---TMYEFDAAVNGAAVVKVPRKSDFSL-N---VELI 210 (249)
Q Consensus 142 ~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~----y---~~~~~~~~~~G~~v~~v~~~~~~~i-d---~e~l 210 (249)
+|+.++ ++...+..++|...+.....+|.+|+++... + .......+..|+.+..++.-..... + .+.+
T Consensus 115 ~G~~~~-~~p~~~~~e~L~~~l~~~~~~g~~vli~~~~~~~~~~~~~~L~~~L~~~G~~V~~~~vY~~~~~~~~~~~~~~ 193 (381)
T PRK07239 115 AGLREE-WSPASESSAEVLEYLLEEGVAGKRIAVQLHGATDEWEPLPEFLEALRAAGAEVVPVPVYRWVPPPDPGPLDRL 193 (381)
T ss_pred cCCCCc-cCCCCCccHHHHHHHhcCCCCCCEEEEEcCCCccccCchHHHHHHHHHCCCEEEEeCcEEEcCCCChhHHHHH
Confidence 466543 3334555556555554444578898886432 1 2355666678999999883111111 1 2456
Q ss_pred HHhhccCCceEEEEcCCCC
Q 025730 211 ADAVEREKPKCIFLTSPNN 229 (249)
Q Consensus 211 ~~~i~~~~~k~i~l~~PnN 229 (249)
.+.+.+.+..+|++++|+.
T Consensus 194 ~~~l~~~~~d~v~FtS~st 212 (381)
T PRK07239 194 VDAIASRGLDAVTFTSAPA 212 (381)
T ss_pred HHHHHcCCccEEEEcCHHH
Confidence 6666645788999998864
No 417
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=45.21 E-value=1.6e+02 Score=23.73 Aligned_cols=100 Identities=18% Similarity=0.182 Sum_probs=54.0
Q ss_pred cCCCCCCE-EEeCCHHHHHHHHHHHhcCCCCe-EEEcCCCChhHHHHHH-------------HCCCEEEEec--CCCC--
Q 025730 142 SGLESDHI-LVGCGADELIDLIMRCVLDPGDK-IVDCPPTFTMYEFDAA-------------VNGAAVVKVP--RKSD-- 202 (249)
Q Consensus 142 ~~~~~~~I-~vt~Ga~~~l~~~~~~~~~pGd~-Vlv~~P~y~~~~~~~~-------------~~G~~v~~v~--~~~~-- 202 (249)
.++++++| .+.-|+|.+.+.++.. .|.+ .++....|........ .....+..+. .+.+
T Consensus 50 ~~~~~~~i~~v~~gTT~~tNAl~e~---~g~~v~li~~~G~~d~l~~~~~~~~~~~~~~~~lv~~~~~~~v~gr~~~~G~ 126 (176)
T PF05378_consen 50 SGIDPSDIDRVRHGTTVATNALLER---KGARVGLITTGGFGDVLEIGRQWRPDLFDLQDPLVPRERVFEVDGRIDADGE 126 (176)
T ss_pred cCCChhhCcEEEeccHHHHHHHHhc---cCCCceEEeccCcHhhcchhhccCCcccccccccccccCEEEECCccccCcE
Confidence 34545544 4678899999988873 3333 3344444432111111 1122334444 1111
Q ss_pred --CCCCHHHHHHhhcc---CCceEEEEc---CCCCccccCCChHHHHHHHhhhhC
Q 025730 203 --FSLNVELIADAVER---EKPKCIFLT---SPNNPDGRFSWTSSWIWGISSEHN 249 (249)
Q Consensus 203 --~~id~e~l~~~i~~---~~~k~i~l~---~PnNPTG~~~~~~e~i~~i~~~~~ 249 (249)
..+|.+++++.+++ .+.+.|.+| ++-|| .-|..+++++++.|
T Consensus 127 ~i~~ld~~~v~~~~~~l~~~gv~avAV~~~fS~~np-----~hE~~v~eii~e~g 176 (176)
T PF05378_consen 127 VIEPLDEDEVREALRELKDKGVEAVAVSLLFSYRNP-----EHEQRVAEIIREEG 176 (176)
T ss_pred EecCCCHHHHHHHHHHHHhCCCCEEEEECccCCCCH-----HHHHHHHHHHHhcC
Confidence 35678888877643 456776666 45565 24566888888765
No 418
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=44.71 E-value=1.7e+02 Score=25.03 Aligned_cols=55 Identities=11% Similarity=0.245 Sum_probs=35.1
Q ss_pred CCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCC---HHHHHHhhccCCceEEEEcCCC
Q 025730 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN---VELIADAVEREKPKCIFLTSPN 228 (249)
Q Consensus 169 pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id---~e~l~~~i~~~~~k~i~l~~Pn 228 (249)
++..+++..+.| ..+++.+|.+++.+.. .+..+. +.++.+.+++.++++||. .|+
T Consensus 169 ~~~~~v~~H~af---~Y~~~~ygl~~~~~~~-~~~eps~~~l~~l~~~ik~~~v~~if~-e~~ 226 (266)
T cd01018 169 KQRAFMVYHPAW---GYFARDYGLTQIPIEE-EGKEPSPADLKRLIDLAKEKGVRVVFV-QPQ 226 (266)
T ss_pred CCCeEEEECchh---HHHHHHcCCEEEecCC-CCCCCCHHHHHHHHHHHHHcCCCEEEE-cCC
Confidence 456777766655 4455778999887642 344554 455555666678888874 444
No 419
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=44.31 E-value=2.1e+02 Score=24.63 Aligned_cols=109 Identities=17% Similarity=0.101 Sum_probs=64.8
Q ss_pred HHHHHHHHcCCCCCCEEEeCCHHHHHHHHH-HHh-----c----------C-CCCeEEEcCCCCh--hHHHHHHHCCCEE
Q 025730 134 LRAALAKDSGLESDHILVGCGADELIDLIM-RCV-----L----------D-PGDKIVDCPPTFT--MYEFDAAVNGAAV 194 (249)
Q Consensus 134 lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~-~~~-----~----------~-pGd~Vlv~~P~y~--~~~~~~~~~G~~v 194 (249)
+.+++...-......|++|.|+.+.-...- ... + . +.+.++.-.+-|. .-..+++.+++.+
T Consensus 118 ~~eA~~~l~~~~~~~iflttGsk~L~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~~~~i~~ 197 (249)
T PF02571_consen 118 YEEAAELLKELGGGRIFLTTGSKNLPPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFRQYGIDV 197 (249)
T ss_pred HHHHHHHHhhcCCCCEEEeCchhhHHHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHHHcCCCE
Confidence 344444333344578999999987665532 100 0 0 2244444444443 3345667789988
Q ss_pred EEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCC-C-hHHHHHHH
Q 025730 195 VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFS-W-TSSWIWGI 244 (249)
Q Consensus 195 ~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~-~-~~e~i~~i 244 (249)
+--.....- -..++++++.+ -+..+|+|..|.-|.|... . .++++..+
T Consensus 198 lVtK~SG~~-g~~eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~e~l~~l 247 (249)
T PF02571_consen 198 LVTKESGGS-GFDEKIEAARE-LGIPVIVIKRPPEPYGDPVVETIEELLDWL 247 (249)
T ss_pred EEEcCCCch-hhHHHHHHHHH-cCCeEEEEeCCCCCCCCcccCCHHHHHHHH
Confidence 777643332 34577777776 7899999999987766553 3 34555544
No 420
>PRK10717 cysteine synthase A; Provisional
Probab=44.23 E-value=1.5e+02 Score=26.31 Aligned_cols=53 Identities=21% Similarity=0.088 Sum_probs=35.5
Q ss_pred CCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
+.|+.++++..++.+++.+- +.-.-.|+++...-..-....+.+|++++.++.
T Consensus 65 ~~vv~aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~ 118 (330)
T PRK10717 65 GTIVEGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPA 118 (330)
T ss_pred CEEEEeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34777888888888777653 222245555554434456677889999999984
No 421
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=43.59 E-value=1e+02 Score=25.79 Aligned_cols=88 Identities=14% Similarity=-0.005 Sum_probs=46.8
Q ss_pred HHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEecCCCCCCCCHHHHHH
Q 025730 135 RAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIAD 212 (249)
Q Consensus 135 r~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~ 212 (249)
-+....++.+....+++|.|+...=..+...+.+.|..|++..-.-. .........+.++..+..+- -|.+.+++
T Consensus 4 ~~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~i~~ 80 (258)
T PRK06935 4 DKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDL---TKPESAEK 80 (258)
T ss_pred hhhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHH
Confidence 34444555555566777777666666667778888988776644321 11122222455555555332 23444444
Q ss_pred hhcc-----CCceEEEEc
Q 025730 213 AVER-----EKPKCIFLT 225 (249)
Q Consensus 213 ~i~~-----~~~k~i~l~ 225 (249)
.+++ .+.+.++.+
T Consensus 81 ~~~~~~~~~g~id~li~~ 98 (258)
T PRK06935 81 VVKEALEEFGKIDILVNN 98 (258)
T ss_pred HHHHHHHHcCCCCEEEEC
Confidence 4331 246666644
No 422
>PLN03013 cysteine synthase
Probab=43.26 E-value=1.6e+02 Score=27.62 Aligned_cols=51 Identities=12% Similarity=-0.038 Sum_probs=33.9
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCC--CeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 148 HILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pG--d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
.|+-.+++..++.+++.+-. .| -.|++++-.-..-....+.+|++++.++.
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~-~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~ 229 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAAS-RGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (429)
T ss_pred EEEEECCcHHHHHHHHHHHH-cCCCEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 36767777778877766532 34 34444444444566777889999999974
No 423
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=42.70 E-value=1.7e+02 Score=24.53 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=29.7
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEec
Q 025730 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (249)
Q Consensus 146 ~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~ 198 (249)
...+++|.|+...=..+...+.+.|.+|++.+-.-..........+.++..+.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~ 57 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVE 57 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEE
Confidence 34566766655544556667788998888765433222333333344555454
No 424
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=42.69 E-value=1.2e+02 Score=26.37 Aligned_cols=33 Identities=9% Similarity=0.237 Sum_probs=15.0
Q ss_pred CCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 190 NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 190 ~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
.+..++-++ .+.++.+. .+.++....++++|..
T Consensus 79 ~~~d~vV~D---~y~~~~~~-~~~~k~~~~~l~~iDD 111 (279)
T TIGR03590 79 EKFDILIVD---HYGLDADW-EKLIKEFGRKILVIDD 111 (279)
T ss_pred cCCCEEEEc---CCCCCHHH-HHHHHHhCCeEEEEec
Confidence 344555543 24555443 3334323445555554
No 425
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=42.65 E-value=1.8e+02 Score=26.90 Aligned_cols=52 Identities=23% Similarity=0.137 Sum_probs=33.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCe--EEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDK--IVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~--Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
+.|+.++++..+..++..+- .-|=+ |+++...-..-....+.+|++++.++.
T Consensus 63 ~~vv~~ssGN~g~alA~~a~-~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 63 DTIIEPTSGNTGIGLALVAA-IKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CEEEEeCCcHHHHHHHHHHH-HcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 45777788888887777653 23433 444443333455566779999999974
No 426
>PLN00011 cysteine synthase
Probab=42.64 E-value=2e+02 Score=25.54 Aligned_cols=52 Identities=13% Similarity=-0.008 Sum_probs=35.1
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCC--CeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pG--d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
+.|+..+++..++.++..+-. -| -.|+++...-..-....+.+|++++.++.
T Consensus 70 ~~vv~aSsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 70 STLIEATAGNTGIGLACIGAA-RGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred cEEEEeCCChHHHHHHHHHHH-cCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 457778888888877776532 34 34445544444566677789999999874
No 427
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=42.59 E-value=2.2e+02 Score=24.54 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=45.5
Q ss_pred CeEEEcCCCCh--hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccc--cCCChHHHHHHHh
Q 025730 171 DKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG--RFSWTSSWIWGIS 245 (249)
Q Consensus 171 d~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG--~~~~~~e~i~~i~ 245 (249)
+.++.-.+-|. .-..+++.+|+.++--....+-+--.++++++.+ -+..+|+|..|.-|.+ .+.+.++++..+.
T Consensus 175 ~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~el~~~l~ 252 (256)
T TIGR00715 175 DRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEA-LGINVIRIARPQTIPGVAIFDDISQLNQFVA 252 (256)
T ss_pred hcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHH-cCCcEEEEeCCCCCCCCccCCCHHHHHHHHH
Confidence 34444444443 3344556688887777643333345688888776 7899999999975543 4444455555543
No 428
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=42.40 E-value=1.3e+02 Score=26.37 Aligned_cols=52 Identities=19% Similarity=0.185 Sum_probs=33.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCC--eEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd--~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
+.|+..+++..++.+++.+-. -|= .|+++.-.-..-....+.+|++++.++.
T Consensus 60 ~~vv~aSsGN~g~alA~~a~~-~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 60 DVLIEATSGNTGIALAMIAAL-KGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CEEEEECCChHHHHHHHHHHH-cCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 347777777888877766532 343 3444443334556677889999999974
No 429
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=41.99 E-value=1.5e+02 Score=24.81 Aligned_cols=80 Identities=10% Similarity=-0.012 Sum_probs=42.9
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH---HHCCCEEEEecCCCCCCCCHHHHHHhhcc----
Q 025730 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (249)
Q Consensus 144 ~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~---~~~G~~v~~v~~~~~~~id~e~l~~~i~~---- 216 (249)
++...+++|.|+...=..++..+.+.|-+|++..-.-....... ...|.++..++.|- -|.+.+++++.+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDV---TDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHHHh
Confidence 33345677666655555566667788878877654432222222 22355666665432 245555555532
Q ss_pred -CCceEEEEcC
Q 025730 217 -EKPKCIFLTS 226 (249)
Q Consensus 217 -~~~k~i~l~~ 226 (249)
.+.++++.+.
T Consensus 85 ~~~id~li~~a 95 (265)
T PRK07097 85 VGVIDILVNNA 95 (265)
T ss_pred CCCCCEEEECC
Confidence 2456666443
No 430
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=41.72 E-value=1e+02 Score=27.59 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=47.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEE
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~ 223 (249)
.|++|.|+.-.=...+..+++.|-.|++.+.-...........-++++.-+. .|-+.|.+.+.+.++.+|+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi-----~D~~~L~~vf~~~~idaVi 72 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDL-----LDRALLTAVFEENKIDAVV 72 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecc-----ccHHHHHHHHHhcCCCEEE
Confidence 4889999988888888888999977776666555444443322234444333 4667788888766776665
No 431
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=40.69 E-value=2.3e+02 Score=24.53 Aligned_cols=73 Identities=12% Similarity=0.178 Sum_probs=48.2
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCCCh---hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 158 LIDLIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 158 ~l~~~~~~~~~pG-d~Vlv~~P~y~---~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
+++..+..+.+.| |.|++++--+. .+...++.+|..++.+=... -+.+.++...+ .....||+.+-...||.
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~Pt---T~~eri~~i~~-~a~gFIY~vS~~GvTG~ 182 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPT---SSKSRIQKIAR-AAPGCIYLVSTTGVTGL 182 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCC---CCHHHHHHHHH-hCCCcEEEEcCCCCCCC
Confidence 5555566555666 88999987775 55667777898877764211 24567766665 34457887666667887
Q ss_pred C
Q 025730 234 F 234 (249)
Q Consensus 234 ~ 234 (249)
-
T Consensus 183 ~ 183 (263)
T CHL00200 183 K 183 (263)
T ss_pred C
Confidence 4
No 432
>KOG4132 consensus Uroporphyrinogen III synthase UROS/HEM4 [Coenzyme transport and metabolism]
Probab=40.21 E-value=45 Score=28.52 Aligned_cols=48 Identities=23% Similarity=0.250 Sum_probs=36.1
Q ss_pred ChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-CCceEEEEcCC
Q 025730 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSP 227 (249)
Q Consensus 180 y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-~~~k~i~l~~P 227 (249)
...|...++.+|.++++||.-.-...+++++.+.+.+ ++-..|++++|
T Consensus 16 ~D~Y~~~l~~~~~epifIP~l~f~f~~l~~lr~kL~~p~kY~giIfTSp 64 (260)
T KOG4132|consen 16 IDPYEEELRSYGLEPIFIPVLSFTFVNLQQLRAKLNNPPKYAGIIFTSP 64 (260)
T ss_pred CCHHHHHHHhcCCCceeecceeeeeccHHHHHHHhcCchhhceeEEeCh
Confidence 5689999999999999999644445679999998864 23345666666
No 433
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=39.94 E-value=1.3e+02 Score=22.06 Aligned_cols=14 Identities=14% Similarity=0.278 Sum_probs=7.1
Q ss_pred HHHHHCCCEEEEec
Q 025730 185 FDAAVNGAAVVKVP 198 (249)
Q Consensus 185 ~~~~~~G~~v~~v~ 198 (249)
..++..|++++.+-
T Consensus 68 ~~a~~~g~~vi~iT 81 (128)
T cd05014 68 PHLKRRGAPIIAIT 81 (128)
T ss_pred HHHHHCCCeEEEEe
Confidence 33444555555554
No 434
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=39.38 E-value=98 Score=26.64 Aligned_cols=72 Identities=19% Similarity=0.081 Sum_probs=45.1
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC-ChhHHHHHHHCCCEEEEecCCCCCCC-CHHHHHHhhccCCceEEEE
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT-FTMYEFDAAVNGAAVVKVPRKSDFSL-NVELIADAVEREKPKCIFL 224 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~-y~~~~~~~~~~G~~v~~v~~~~~~~i-d~e~l~~~i~~~~~k~i~l 224 (249)
..|++-.|++++-.++-. +.+.|-.|++..-+ |.. ....+..+. .+.+ |.+.+++.+.++++++|+
T Consensus 3 ~~IlvlgGT~egr~la~~-L~~~g~~v~~Svat~~g~----~~~~~~~v~------~G~l~~~~~l~~~l~~~~i~~VI- 70 (248)
T PRK08057 3 PRILLLGGTSEARALARA-LAAAGVDIVLSLAGRTGG----PADLPGPVR------VGGFGGAEGLAAYLREEGIDLVI- 70 (248)
T ss_pred ceEEEEechHHHHHHHHH-HHhCCCeEEEEEccCCCC----cccCCceEE------ECCCCCHHHHHHHHHHCCCCEEE-
Confidence 358888999999877754 44567666655433 332 122222222 2456 899999999878888776
Q ss_pred cCCCCcc
Q 025730 225 TSPNNPD 231 (249)
Q Consensus 225 ~~PnNPT 231 (249)
..++|.
T Consensus 71 -DATHPf 76 (248)
T PRK08057 71 -DATHPY 76 (248)
T ss_pred -ECCCcc
Confidence 344443
No 435
>COG2004 RPS24A Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]
Probab=38.90 E-value=41 Score=25.12 Aligned_cols=25 Identities=28% Similarity=0.569 Sum_probs=21.2
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEE
Q 025730 127 PDPESRRLRAALAKDSGLESDHILV 151 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~v 151 (249)
|.+.-.++|+.||+.++.+.+.|++
T Consensus 30 ~TPSr~evrekla~~l~~d~e~VvV 54 (107)
T COG2004 30 PTPSRKEVREKLAAMLGADKELVVV 54 (107)
T ss_pred CCCCHHHHHHHHHHHHCCCcceEEE
Confidence 3455789999999999999988877
No 436
>PLN02565 cysteine synthase
Probab=38.72 E-value=1.9e+02 Score=25.77 Aligned_cols=50 Identities=14% Similarity=-0.001 Sum_probs=32.3
Q ss_pred EEEeCCHHHHHHHHHHHhcCCC--CeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 149 ILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pG--d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
|+-.+++..++.++..+-. -| -.|+++.-.-..-....+.+|++++.++.
T Consensus 70 vv~aSsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 70 LIEPTSGNTGIGLAFMAAA-KGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEECCChHHHHHHHHHHH-cCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 6666677777777665432 34 34444444444566777889999998864
No 437
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=38.41 E-value=2e+02 Score=25.01 Aligned_cols=52 Identities=17% Similarity=0.050 Sum_probs=33.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCC--eEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd--~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
+.|+..+++..+..++..+-. -|= .|+++.-.-..-....+.+|++++.++.
T Consensus 58 ~~vv~aSsGN~g~alA~~a~~-~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 111 (298)
T TIGR01139 58 KTIVEPTSGNTGIALAMVAAA-RGYKLILTMPETMSIERRKLLKAYGAELVLTPG 111 (298)
T ss_pred CEEEEeCCChhHHHHHHHHHH-cCCeEEEEeCCccCHHHHHHHHHcCCEEEEECC
Confidence 347777777888777765432 343 4444443334445667779999999974
No 438
>PRK06500 short chain dehydrogenase; Provisional
Probab=38.11 E-value=1.5e+02 Score=24.31 Aligned_cols=53 Identities=15% Similarity=0.092 Sum_probs=31.3
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
..+++|.|+...=..++..+.+.|.+|++..-.-.......+..|.++..+..
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 59 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRA 59 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEe
Confidence 35677666666666667777888888876654322233333344666655554
No 439
>PRK11543 gutQ D-arabinose 5-phosphate isomerase; Provisional
Probab=38.09 E-value=1.4e+02 Score=26.20 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=7.2
Q ss_pred CCceEEEEcC-CCCcc
Q 025730 217 EKPKCIFLTS-PNNPD 231 (249)
Q Consensus 217 ~~~k~i~l~~-PnNPT 231 (249)
.+++.|.|++ ++||.
T Consensus 115 ~g~~vI~iT~~~~s~l 130 (321)
T PRK11543 115 KSIALLAMTGKPTSPL 130 (321)
T ss_pred cCCeEEEEECCCCChh
Confidence 4555555553 34443
No 440
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=38.08 E-value=2.6e+02 Score=23.93 Aligned_cols=83 Identities=18% Similarity=0.163 Sum_probs=38.0
Q ss_pred EEEeCCHHHHHHHHHHH-hcCCCCeEEEcCCCChhHHHHHHHC--CCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEc
Q 025730 149 ILVGCGADELIDLIMRC-VLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~-~~~pGd~Vlv~~P~y~~~~~~~~~~--G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~ 225 (249)
.+++.|.+..+..-+.. +..-|..+....-.+. ........ +--++.+... +..-+.-.+.+.+++.+.+.|.|+
T Consensus 132 ~i~G~G~s~~~A~~~~~~l~~~g~~~~~~~d~~~-~~~~~~~~~~~Dv~I~iS~s-g~~~~~~~~~~~ak~~ga~iI~IT 209 (278)
T PRK11557 132 ILTGIGASGLVAQNFAWKLMKIGINAVAERDMHA-LLATVQALSPDDLLLAISYS-GERRELNLAADEALRVGAKVLAIT 209 (278)
T ss_pred EEEecChhHHHHHHHHHHHhhCCCeEEEcCChHH-HHHHHHhCCCCCEEEEEcCC-CCCHHHHHHHHHHHHcCCCEEEEc
Confidence 34566766655544443 3455655555322222 22222222 2234444332 122222333333444677777777
Q ss_pred C-CCCcccc
Q 025730 226 S-PNNPDGR 233 (249)
Q Consensus 226 ~-PnNPTG~ 233 (249)
+ +++|.+.
T Consensus 210 ~~~~s~la~ 218 (278)
T PRK11557 210 GFTPNALQQ 218 (278)
T ss_pred CCCCCchHH
Confidence 4 5666654
No 441
>PRK11524 putative methyltransferase; Provisional
Probab=38.04 E-value=61 Score=28.25 Aligned_cols=46 Identities=20% Similarity=0.225 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCC
Q 025730 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS 201 (249)
Q Consensus 156 ~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~ 201 (249)
.+++..++..+..+||.|+-+=-+=+.....|+..|.+.+.+..+.
T Consensus 195 ~~L~erlI~~~S~~GD~VLDPF~GSGTT~~AA~~lgR~~IG~Ei~~ 240 (284)
T PRK11524 195 EALLKRIILASSNPGDIVLDPFAGSFTTGAVAKASGRKFIGIEINS 240 (284)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCcHHHHHHHHcCCCEEEEeCCH
Confidence 6788899999999999999775555677788888999999998643
No 442
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=37.87 E-value=2.3e+02 Score=23.26 Aligned_cols=93 Identities=13% Similarity=0.230 Sum_probs=50.3
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEE---EcCCC-C----------hhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhh
Q 025730 149 ILVGCGADELIDLIMRCVLDPGDKIV---DCPPT-F----------TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pGd~Vl---v~~P~-y----------~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i 214 (249)
++.-+|+..+..++..+. +.|..|. +..|. + ......++..|+..+.++.+.+..--.+.+.+.+
T Consensus 3 ~v~~SGGkDS~~al~~a~-~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e~~~~~l~~~l 81 (194)
T cd01994 3 VALISGGKDSCYALYRAL-EEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEEEDEVEDLKELL 81 (194)
T ss_pred EEEecCCHHHHHHHHHHH-HcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCchHHHHHHHHHH
Confidence 445677777777776654 3454433 11111 1 1334566778998887764221111124444444
Q ss_pred cc---CCceEEEEcCCCCccccCCChH--HHHHHHhhhhC
Q 025730 215 ER---EKPKCIFLTSPNNPDGRFSWTS--SWIWGISSEHN 249 (249)
Q Consensus 215 ~~---~~~k~i~l~~PnNPTG~~~~~~--e~i~~i~~~~~ 249 (249)
.+ .+...|+ +|...++. .++..+|++.|
T Consensus 82 ~~~~~~g~~~vv-------~G~i~sd~~~~~~e~~~~~~g 114 (194)
T cd01994 82 RKLKEEGVDAVV-------FGAILSEYQRTRVERVCERLG 114 (194)
T ss_pred HHHHHcCCCEEE-------ECccccHHHHHHHHHHHHHcC
Confidence 32 2355666 77776665 55778887754
No 443
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=37.69 E-value=2.7e+02 Score=24.05 Aligned_cols=54 Identities=19% Similarity=0.289 Sum_probs=34.2
Q ss_pred CCCeEEEcCCCChhHHHHHHHCCCEEEEec-CCCCCCCCHHHHH---HhhccCCceEEEEc
Q 025730 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIA---DAVEREKPKCIFLT 225 (249)
Q Consensus 169 pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~-~~~~~~id~e~l~---~~i~~~~~k~i~l~ 225 (249)
++..+++..|.|. .+++.+|.+++.+. ...+..+.+.+|. +.+++.++++||..
T Consensus 170 ~~~~~v~~H~af~---Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e 227 (282)
T cd01017 170 KGKTFVTQHAAFG---YLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFE 227 (282)
T ss_pred CCCeEEEecccHH---HHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4677888877765 34467899988764 3334455554444 45565778888743
No 444
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=37.68 E-value=1.5e+02 Score=24.76 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=41.2
Q ss_pred CEEEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCChhHHH-----HHHHCCCEEEEecCCCCCCCCHHHHHHhhccCC
Q 025730 148 HILVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREK 218 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~--~~pGd~Vlv~~P~y~~~~~-----~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~ 218 (249)
-|+.|+|.+..-....... +.++|.++ ..|-|..+-. ..-..|+.++.++ .+|++.+.+.+++.+
T Consensus 154 ~l~yTsg~~~~~~~~~~~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~-----rFd~~~~l~~i~~~~ 225 (227)
T TIGR03089 154 LVAGGGEWTGAELVAAARAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVT-----HPDPARLDQIAETER 225 (227)
T ss_pred eeeccccccHHHHHHHHhhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEec-----CCCHHHHHHHHHhhc
Confidence 4667877654433222211 56889999 8888764332 2222799888874 468888888887544
No 445
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=37.51 E-value=68 Score=22.97 Aligned_cols=62 Identities=18% Similarity=0.186 Sum_probs=37.0
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC-hhHHHHHHHCCCEEEEe
Q 025730 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDAAVNGAAVVKV 197 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y-~~~~~~~~~~G~~v~~v 197 (249)
|..+..+|++.+++.+|.+.+. .+ .+ .+..+=+.||.|++..-.- ..-...++..|.+.+.+
T Consensus 19 ~s~~~~~L~~~I~~Rl~~d~~~----~~---~~--~L~YlDDEgD~VllT~D~DL~e~v~iar~~g~~~v~L 81 (86)
T cd06409 19 PSESLEELRTLISQRLGDDDFE----TH---LY--ALSYVDDEGDIVLITSDSDLVAAVLVARSAGLKKLDL 81 (86)
T ss_pred CCCCHHHHHHHHHHHhCCcccc----CC---cc--cEEEEcCCCCEEEEeccchHHHHHHHHHHcCCCEEEE
Confidence 4568999999999999876432 01 11 1222345778887664443 34445555566655544
No 446
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=37.31 E-value=2.6e+02 Score=24.13 Aligned_cols=52 Identities=21% Similarity=0.089 Sum_probs=33.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCC--CeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pG--d~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
..|+..+++..+..++..+- .-| -.|+++.-.-..-....+.+|++++.++.
T Consensus 54 ~~vv~~SsGN~g~alA~~a~-~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~ 107 (291)
T cd01561 54 TTIIEPTSGNTGIGLAMVAA-AKGYRFIIVMPETMSEEKRKLLRALGAEVILTPE 107 (291)
T ss_pred CEEEEeCCChHHHHHHHHHH-HcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 44777777777777666542 234 34444443334555677779999999984
No 447
>PLN02591 tryptophan synthase
Probab=37.25 E-value=2.7e+02 Score=23.97 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=50.5
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCCCh---hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 158 LIDLIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 158 ~l~~~~~~~~~pG-d~Vlv~~P~y~---~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
+++..+..+.+-| |-|++++-.+. .+...++.+|..++.+-.. ..+.+.+++..+ .....||+.+-...||.
T Consensus 94 G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P---tt~~~ri~~ia~-~~~gFIY~Vs~~GvTG~ 169 (250)
T PLN02591 94 GIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTP---TTPTERMKAIAE-ASEGFVYLVSSTGVTGA 169 (250)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC---CCCHHHHHHHHH-hCCCcEEEeeCCCCcCC
Confidence 5666666666666 89999998875 5666777789988776421 224466666655 46678887776778886
Q ss_pred C
Q 025730 234 F 234 (249)
Q Consensus 234 ~ 234 (249)
-
T Consensus 170 ~ 170 (250)
T PLN02591 170 R 170 (250)
T ss_pred C
Confidence 4
No 448
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=36.78 E-value=60 Score=28.97 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=33.1
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHH
Q 025730 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184 (249)
Q Consensus 144 ~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~ 184 (249)
...-.|++|.|+.-.-..++.-+...|++|++.+-.|....
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k 65 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRK 65 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccch
Confidence 34457999998887778888888889999999999886433
No 449
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=36.65 E-value=2.1e+02 Score=24.89 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=47.8
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCCCh---hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCcccc
Q 025730 158 LIDLIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233 (249)
Q Consensus 158 ~l~~~~~~~~~pG-d~Vlv~~P~y~---~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~ 233 (249)
+++..+..+.+-| |-+++++--+. .+...++.+|..++.+=.. .-..+.+++..+ .....||+.+-...||.
T Consensus 103 G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p---~t~~~Ri~~i~~-~a~gFiY~vs~~GvTG~ 178 (259)
T PF00290_consen 103 GIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVAP---TTPEERIKKIAK-QASGFIYLVSRMGVTGS 178 (259)
T ss_dssp -HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEET---TS-HHHHHHHHH-H-SSEEEEESSSSSSST
T ss_pred chHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEECC---CCCHHHHHHHHH-hCCcEEEeeccCCCCCC
Confidence 3444444444445 88999997775 5666677799988776421 124567766665 45678998888888998
Q ss_pred CCC
Q 025730 234 FSW 236 (249)
Q Consensus 234 ~~~ 236 (249)
--.
T Consensus 179 ~~~ 181 (259)
T PF00290_consen 179 RTE 181 (259)
T ss_dssp TSS
T ss_pred ccc
Confidence 643
No 450
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=36.63 E-value=58 Score=27.76 Aligned_cols=60 Identities=10% Similarity=-0.002 Sum_probs=35.6
Q ss_pred CCeEEEcCCCCh--hHHHHHHHCCCEEEEecCCCC-CCCCHHHHHHhhcc-CCceEEEEcCCCC
Q 025730 170 GDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVER-EKPKCIFLTSPNN 229 (249)
Q Consensus 170 Gd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~~~-~~id~e~l~~~i~~-~~~k~i~l~~PnN 229 (249)
|.+|++.-|.-. .....++..|++++.+|.-+- ..-+...+.+++.+ .+.+.|+++++|-
T Consensus 3 g~~vlvTRp~~~~~~l~~~l~~~G~~~~~~P~i~i~p~~~~~~~~~~l~~l~~~d~iifTS~na 66 (255)
T PRK05752 3 GWRLLLTRPAEECAALAASLAEAGIFSSSLPLLAIEPLPETPEQRALLLELDRYCAVIVVSKPA 66 (255)
T ss_pred CCEEEECCcHHHHHHHHHHHHHcCCCEEEcCcEEEeeCCCCHHHHHHHhcCCCCCEEEEECHHH
Confidence 568888888875 455566668999999883110 11122233333321 3567788888763
No 451
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=36.07 E-value=1.8e+02 Score=24.17 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=43.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-----CCceE
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~~~k~ 221 (249)
..+++|.|+...=..++..+.+.|.+|++.+..........+..+.++..+..|- -|.+.+++++++ .+.++
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV---TRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 3567776666555666667788898888876665444444443444455554321 244555554432 24566
Q ss_pred EEEc
Q 025730 222 IFLT 225 (249)
Q Consensus 222 i~l~ 225 (249)
++.+
T Consensus 84 li~~ 87 (257)
T PRK07067 84 LFNN 87 (257)
T ss_pred EEEC
Confidence 6644
No 452
>PRK11302 DNA-binding transcriptional regulator HexR; Provisional
Probab=34.85 E-value=2.8e+02 Score=23.73 Aligned_cols=19 Identities=21% Similarity=0.282 Sum_probs=11.2
Q ss_pred hccCCceEEEEcCCCCccc
Q 025730 214 VEREKPKCIFLTSPNNPDG 232 (249)
Q Consensus 214 i~~~~~k~i~l~~PnNPTG 232 (249)
.++.+.+.|.|+++++|..
T Consensus 198 ak~~g~~vI~IT~~~s~l~ 216 (284)
T PRK11302 198 ARENGATVIAITSAGSPLA 216 (284)
T ss_pred HHHcCCeEEEECCCCChhH
Confidence 3335667777776655544
No 453
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=34.66 E-value=2e+02 Score=24.33 Aligned_cols=93 Identities=15% Similarity=0.075 Sum_probs=51.5
Q ss_pred HHHHHHHHcCCCCCCEEEeCCHHHHHHHH--HHHh-cCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEecCC--CCCCCC
Q 025730 134 LRAALAKDSGLESDHILVGCGADELIDLI--MRCV-LDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK--SDFSLN 206 (249)
Q Consensus 134 lr~~la~~~~~~~~~I~vt~Ga~~~l~~~--~~~~-~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~--~~~~id 206 (249)
..+++.+ +|+..+. +...+..++|..+ +... ..+|.+|++....-. ......+..|+++..++.- ..-..+
T Consensus 93 Ta~al~~-~G~~~~~-~p~~~~se~Ll~~~~l~~~~~~~~~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~vY~~~~~~~~ 170 (255)
T PRK05752 93 TAAILQD-YGLDVSY-PEQGDDSEALLALPALRQALAVPDPRVLIMRGEGGRELLAERLREQGASVDYLELYRRCLPDYP 170 (255)
T ss_pred HHHHHHH-cCCCccc-CCCCCCcHHHHhChhhhccccCCCCEEEEEccCccHHHHHHHHHHCCCEEeEEEEEeecCCCCC
Confidence 3344433 4665432 2233444454432 2222 246788998766653 4555556689988887621 111223
Q ss_pred HHHHHHhhccCCceEEEEcCCC
Q 025730 207 VELIADAVEREKPKCIFLTSPN 228 (249)
Q Consensus 207 ~e~l~~~i~~~~~k~i~l~~Pn 228 (249)
.+.+.+.+...+..+|++++++
T Consensus 171 ~~~~~~~~~~~~~d~v~ftS~~ 192 (255)
T PRK05752 171 AGTLLQRVEAERLNGLVVSSGQ 192 (255)
T ss_pred HHHHHHHHHhCCCCEEEECCHH
Confidence 5666666655678888888875
No 454
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=34.29 E-value=1.3e+02 Score=24.25 Aligned_cols=46 Identities=20% Similarity=0.252 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCC
Q 025730 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK 200 (249)
Q Consensus 155 a~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~ 200 (249)
-.+++..++....++||.|+-+=-+=+.....|...|.+.+.+..+
T Consensus 177 P~~l~~~lI~~~t~~gdiVlDpF~GSGTT~~aa~~l~R~~ig~E~~ 222 (231)
T PF01555_consen 177 PVELIERLIKASTNPGDIVLDPFAGSGTTAVAAEELGRRYIGIEID 222 (231)
T ss_dssp -HHHHHHHHHHHS-TT-EEEETT-TTTHHHHHHHHTT-EEEEEESS
T ss_pred CHHHHHHHHHhhhccceeeehhhhccChHHHHHHHcCCeEEEEeCC
Confidence 4678888899889999988876555557778888899999998754
No 455
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=34.28 E-value=91 Score=22.95 Aligned_cols=8 Identities=38% Similarity=0.646 Sum_probs=4.0
Q ss_pred CCCEEEEe
Q 025730 190 NGAAVVKV 197 (249)
Q Consensus 190 ~G~~v~~v 197 (249)
.|++++.+
T Consensus 72 ~g~~vi~i 79 (126)
T cd05008 72 KGAKTVAI 79 (126)
T ss_pred cCCeEEEE
Confidence 45555544
No 456
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=34.11 E-value=1.7e+02 Score=22.56 Aligned_cols=40 Identities=13% Similarity=0.147 Sum_probs=17.6
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEec
Q 025730 159 IDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVP 198 (249)
Q Consensus 159 l~~~~~~~~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~ 198 (249)
+.++...+-..|=+|+..-..-+ .+...+...+.+++.+.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS 61 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVS 61 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 33333333345544544433332 33334444555555555
No 457
>PRK06483 dihydromonapterin reductase; Provisional
Probab=33.96 E-value=2.6e+02 Score=22.80 Aligned_cols=52 Identities=13% Similarity=0.053 Sum_probs=29.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
.+++|.|+...=..+...+.+.|.+|++..-.-.......+..|...+.++.
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~ 55 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADF 55 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCC
Confidence 4667666665555566667788888877654332222333335655555443
No 458
>PF02602 HEM4: Uroporphyrinogen-III synthase HemD; InterPro: IPR003754 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents uroporphyrinogen III synthase (4.2.1.75 from EC) which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses the inversion of the final pyrrole unit (ring D) of the linear tetrapyrrole molecule, linking it to the first pyrrole unit (ring A), thereby generating a large macrocyclic structure called uroporphyrinogen III []. The enzyme folds into two alpha/beta domains connected by a beta-ladder, the active site being located between the two domains []. Congenital erythropoietic porphyria (CEP) is an autosomal recessive inborn error of metabolism that results from the markedly deficient activity of uroporphyrinogen III synthase []. ; GO: 0004852 uroporphyrinogen-III synthase activity, 0033014 tetrapyrrole biosynthetic process; PDB: 1WD7_B 1WCX_A 1WCW_A 3D8R_A 3D8T_B 3D8S_A 3D8N_A 3RE1_A 3MW8_A 3P9Z_A ....
Probab=33.59 E-value=70 Score=26.39 Aligned_cols=95 Identities=17% Similarity=0.176 Sum_probs=53.8
Q ss_pred HHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCC--hhHHHHHHHCCCEEEEecCCCC-CCCCHH
Q 025730 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSD-FSLNVE 208 (249)
Q Consensus 132 ~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y--~~~~~~~~~~G~~v~~v~~~~~-~~id~e 208 (249)
+...+++.++ |+..+.+--..+..++|...+...+. |++|+++.-.. .......+..|.++..+..-.. -....+
T Consensus 81 ~~Ta~~l~~~-G~~~~~~~~~~~~s~~L~~~l~~~~~-~~~vl~~~g~~~~~~l~~~L~~~g~~v~~~~vY~~~~~~~~~ 158 (231)
T PF02602_consen 81 PKTAEALREY-GFQPDFVPSSEGSSEGLAELLKEQLR-GKRVLILRGEGGRPDLPEKLREAGIEVTEVIVYETPPEELSP 158 (231)
T ss_dssp HHHHHHHHHT-T-EECEE-TTSSSHHHHHGGHHHCCT-TEEEEEEESSSSCHHHHHHHHHTTEEEEEEECEEEEEHHHHH
T ss_pred HHHHHHHHHc-CCCccccCCCCCCHHHHHHHHHhhCC-CCeEEEEcCCCccHHHHHHHHHCCCeEEEEEEeecccccchH
Confidence 3444555554 76554333325666666555554333 36777654433 3555666678999988874221 011345
Q ss_pred HHHHhhccCCceEEEEcCCC
Q 025730 209 LIADAVEREKPKCIFLTSPN 228 (249)
Q Consensus 209 ~l~~~i~~~~~k~i~l~~Pn 228 (249)
.+.+.+...+..+|++++|.
T Consensus 159 ~~~~~l~~~~~~~v~ftS~~ 178 (231)
T PF02602_consen 159 ELKEALDRGEIDAVVFTSPS 178 (231)
T ss_dssp HHHHHHHHTTTSEEEESSHH
T ss_pred HHHHHHHcCCCCEEEECCHH
Confidence 56666654678899988875
No 459
>PRK06482 short chain dehydrogenase; Provisional
Probab=33.54 E-value=2.4e+02 Score=23.75 Aligned_cols=75 Identities=9% Similarity=0.073 Sum_probs=38.8
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-----CCceEE
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~~~k~i 222 (249)
.+++|.|+...=..++..+++.|..|++..-............+.++..+..+- -|.+.+++.+++ .+...|
T Consensus 4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDV---TDSAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccC---CCHHHHHHHHHHHHHHcCCCCEE
Confidence 366766655555556667788888887765443323332232333444444321 144555544431 345666
Q ss_pred EEc
Q 025730 223 FLT 225 (249)
Q Consensus 223 ~l~ 225 (249)
+.+
T Consensus 81 i~~ 83 (276)
T PRK06482 81 VSN 83 (276)
T ss_pred EEC
Confidence 644
No 460
>PRK07102 short chain dehydrogenase; Provisional
Probab=33.49 E-value=2.4e+02 Score=23.15 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=38.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHH----HCCCEEEEecCCCCCCCCHHHHHHhhcc--CCceE
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVER--EKPKC 221 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~----~~G~~v~~v~~~~~~~id~e~l~~~i~~--~~~k~ 221 (249)
.+++|.|+...=..++..+++.|.+|++.+-.-.......+ ..+.++..++.|-. |.+++++.+++ .+..+
T Consensus 3 ~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 3 KILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDIL---DTASHAAFLDSLPALPDI 79 (243)
T ss_pred EEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCC---ChHHHHHHHHHHhhcCCE
Confidence 36666666555556666777888888776544332222221 12445555554322 34455444431 23455
Q ss_pred EEE
Q 025730 222 IFL 224 (249)
Q Consensus 222 i~l 224 (249)
++.
T Consensus 80 vv~ 82 (243)
T PRK07102 80 VLI 82 (243)
T ss_pred EEE
Confidence 653
No 461
>PRK01178 rps24e 30S ribosomal protein S24e; Reviewed
Probab=32.99 E-value=58 Score=23.98 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=20.0
Q ss_pred CcChHHHHHHHHHHcCCCCCCEEE
Q 025730 128 DPESRRLRAALAKDSGLESDHILV 151 (249)
Q Consensus 128 ~~g~~~lr~~la~~~~~~~~~I~v 151 (249)
.+.-.++++.||+.++.+++.|++
T Consensus 30 tpsr~eirekLa~~~~~~~~~vvv 53 (99)
T PRK01178 30 TPSRKDVRKKLAAMLNADKELVVV 53 (99)
T ss_pred CCCHHHHHHHHHHHHCcCCCEEEE
Confidence 345789999999999988887776
No 462
>PRK06841 short chain dehydrogenase; Provisional
Probab=32.90 E-value=2.6e+02 Score=23.07 Aligned_cols=79 Identities=14% Similarity=0.110 Sum_probs=40.7
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-----CC
Q 025730 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (249)
Q Consensus 144 ~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~~ 218 (249)
+....+++|.|+...=..+...+.+.|.+|++..-.........+..+.++..++.+- -|.+.+++.+++ .+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV---SDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecC---CCHHHHHHHHHHHHHHhCC
Confidence 3344677776555554555666778898888765443322222222344444444321 245555554431 24
Q ss_pred ceEEEEc
Q 025730 219 PKCIFLT 225 (249)
Q Consensus 219 ~k~i~l~ 225 (249)
.++++.+
T Consensus 90 ~d~vi~~ 96 (255)
T PRK06841 90 IDILVNS 96 (255)
T ss_pred CCEEEEC
Confidence 5666644
No 463
>PRK08862 short chain dehydrogenase; Provisional
Probab=32.74 E-value=1.7e+02 Score=24.26 Aligned_cols=65 Identities=15% Similarity=0.112 Sum_probs=36.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHH---HHHCCCEEEEecCCCCCCCCHHHHHHhh
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAV 214 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~---~~~~G~~v~~v~~~~~~~id~e~l~~~i 214 (249)
..+++|.|+...=..+...+.+.|.+|++..-.-...... .+..|.++..+..+. -|.+.+++.+
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~---~~~~~~~~~~ 73 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKD---FSQESIRHLF 73 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccC---CCHHHHHHHH
Confidence 4566666666555556667788999988875443322222 223466666665432 2455555443
No 464
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=32.70 E-value=1.8e+02 Score=26.85 Aligned_cols=79 Identities=20% Similarity=0.191 Sum_probs=42.9
Q ss_pred CCEEEeCCHHHHH-HHHHHHh--------cCCCCeEEEcCCCChhHH-----H----HHHHCCCEEEEecCCCCCCCCHH
Q 025730 147 DHILVGCGADELI-DLIMRCV--------LDPGDKIVDCPPTFTMYE-----F----DAAVNGAAVVKVPRKSDFSLNVE 208 (249)
Q Consensus 147 ~~I~vt~Ga~~~l-~~~~~~~--------~~pGd~Vlv~~P~y~~~~-----~----~~~~~G~~v~~v~~~~~~~id~e 208 (249)
+.|+++.|++... ..+.+.. +++||.|++..+.++.+. . .....|+++.. ...-.+..+-+
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~h~SgHa~~~ 365 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIK-RIHVSGHASQE 365 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEe-ceEecCCCCHH
Confidence 4566776664333 3333322 237899998887776444 1 12236777643 11122344566
Q ss_pred HHHHhhccCCceEEEEcC
Q 025730 209 LIADAVEREKPKCIFLTS 226 (249)
Q Consensus 209 ~l~~~i~~~~~k~i~l~~ 226 (249)
++...++.-++|.++..|
T Consensus 366 dl~~~i~~~~Pk~~ipvH 383 (422)
T TIGR00649 366 DHKLLLRLLKPKYIIPVH 383 (422)
T ss_pred HHHHHHHHhCCCEEEecC
Confidence 666666544577776433
No 465
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=32.27 E-value=53 Score=22.88 Aligned_cols=26 Identities=27% Similarity=0.318 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHH
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGAD 156 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~ 156 (249)
..++.+.|++.|+++..+|-+..|.+
T Consensus 42 N~ali~~La~~l~v~ks~i~i~~G~~ 67 (77)
T PF02594_consen 42 NKALIRFLAKALGVPKSDIEIVSGHT 67 (77)
T ss_dssp HHHHHHHHHHHCT--TTCEEECC-CC
T ss_pred HHHHHHHHHHHhCCCcccEEEEecCC
Confidence 67899999999999999999988864
No 466
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=32.24 E-value=3.1e+02 Score=23.54 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=57.8
Q ss_pred CCEEEeCCHHHHHHHHH-H--------Hh------cC-CCCeEEEcCCCCh--hHHHHHHHCCCEEEEecCCCCCCCCHH
Q 025730 147 DHILVGCGADELIDLIM-R--------CV------LD-PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVE 208 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~-~--------~~------~~-pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~~~~~id~e 208 (249)
.+|++|.|+...-...- . .+ .. +++.++.-.|-|. .-..+++.+++.++--....+- --.+
T Consensus 128 ~~vllttGsk~l~~f~~~~~~~r~~~RvLP~~~s~~g~~~~~iiam~gPfs~e~n~aL~~~~~i~~lVtK~SG~~-g~~e 206 (248)
T PRK08057 128 RRVLLTTGRQPLAHFAAILPEHRLLVRVLPPPEVLLGLPRAEIIALRGPFSLELERALLRQHRIDVVVTKNSGGA-GTEA 206 (248)
T ss_pred CCEEEecCcchHHHHhhcCCCCEEEEEECCCchhcCCCChhhEEEeeCCCCHHHHHHHHHHcCCCEEEEcCCCch-hhHH
Confidence 58999999976443321 0 00 00 2344554444443 3345566688888777643222 3467
Q ss_pred HHHHhhccCCceEEEEcCCCCccc--cCCChHHHHHHHhh
Q 025730 209 LIADAVEREKPKCIFLTSPNNPDG--RFSWTSSWIWGISS 246 (249)
Q Consensus 209 ~l~~~i~~~~~k~i~l~~PnNPTG--~~~~~~e~i~~i~~ 246 (249)
+++++.+ -+..+|+|..|.-|.+ .+.+.++++..+.+
T Consensus 207 Ki~AA~~-lgi~vivI~RP~~~~~~~~~~~~~e~~~~l~~ 245 (248)
T PRK08057 207 KLEAARE-LGIPVVMIARPALPYADREFEDVAELVAWLRH 245 (248)
T ss_pred HHHHHHH-cCCeEEEEeCCCCCCCCcccCCHHHHHHHHHH
Confidence 7777766 7899999999975544 34344555555544
No 467
>PRK05717 oxidoreductase; Validated
Probab=32.18 E-value=2e+02 Score=23.94 Aligned_cols=53 Identities=15% Similarity=-0.075 Sum_probs=30.8
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
..+++|.|+...=..++..+.+.|.+|++.+-.........+..+.++..+..
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAM 63 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEc
Confidence 34677766655555666777788888887754433333333334544555543
No 468
>PRK05872 short chain dehydrogenase; Provisional
Probab=32.02 E-value=2.8e+02 Score=23.80 Aligned_cols=76 Identities=14% Similarity=0.056 Sum_probs=42.1
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHC--CCEEEEecCCCCCCCCHHHHHHhhcc-----C
Q 025730 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVER-----E 217 (249)
Q Consensus 145 ~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~--G~~v~~v~~~~~~~id~e~l~~~i~~-----~ 217 (249)
+...+++|.|+...=..+...+.+.|.+|++..-.-.......+.. +.++..+..|- -|.+.+++.+++ .
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV---TDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC---CCHHHHHHHHHHHHHHcC
Confidence 3446777776665556666677888988887765443333333333 34555544321 245555554432 3
Q ss_pred CceEEE
Q 025730 218 KPKCIF 223 (249)
Q Consensus 218 ~~k~i~ 223 (249)
+.++++
T Consensus 85 ~id~vI 90 (296)
T PRK05872 85 GIDVVV 90 (296)
T ss_pred CCCEEE
Confidence 456665
No 469
>PRK08265 short chain dehydrogenase; Provisional
Probab=31.69 E-value=3.1e+02 Score=22.93 Aligned_cols=75 Identities=15% Similarity=0.071 Sum_probs=40.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-----CCceE
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~~~k~ 221 (249)
..+++|.|+...=..+...+++.|..|++.+-.-.......+..+.++..+..|- -|.+.+++.+++ .+.+.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDI---TDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecC---CCHHHHHHHHHHHHHHhCCCCE
Confidence 4566766666555566667788898888765443333333444455555555432 244555444432 24566
Q ss_pred EEE
Q 025730 222 IFL 224 (249)
Q Consensus 222 i~l 224 (249)
++.
T Consensus 84 lv~ 86 (261)
T PRK08265 84 LVN 86 (261)
T ss_pred EEE
Confidence 553
No 470
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=31.36 E-value=1.8e+02 Score=24.21 Aligned_cols=98 Identities=17% Similarity=0.058 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcC----------CCChhHHHHHHHCCCEEEEecCC
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP----------PTFTMYEFDAAVNGAAVVKVPRK 200 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~----------P~y~~~~~~~~~~G~~v~~v~~~ 200 (249)
+++..++|.+|....-.-.+.++|+-.+=.+++.. ...||---..+ -.-..|..++...|+.+..+-.-
T Consensus 105 ypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fgh-s~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~eilFL 183 (229)
T COG4229 105 YPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGH-SDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEILFL 183 (229)
T ss_pred CHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcc-cccccHHhhhcceeeccccccccchhHHHHHHhcCCCchheEEe
Confidence 56677888888643333456677777776666653 23343222222 22247888888888766555411
Q ss_pred CCCCCCHHHHHHhhccCCceEEEEcCCC-Ccccc
Q 025730 201 SDFSLNVELIADAVEREKPKCIFLTSPN-NPDGR 233 (249)
Q Consensus 201 ~~~~id~e~l~~~i~~~~~k~i~l~~Pn-NPTG~ 233 (249)
.| ++++|.++-. -..+.+.+..|. .|++.
T Consensus 184 SD---n~~EL~AA~~-vGl~t~l~~R~g~~P~~d 213 (229)
T COG4229 184 SD---NPEELKAAAG-VGLATGLAVRPGNAPVPD 213 (229)
T ss_pred cC---CHHHHHHHHh-cchheeeeecCCCCCCCC
Confidence 11 4788888765 556667777774 47765
No 471
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=31.29 E-value=1.4e+02 Score=24.73 Aligned_cols=58 Identities=21% Similarity=0.069 Sum_probs=37.9
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCH
Q 025730 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207 (249)
Q Consensus 150 ~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~ 207 (249)
++|.|++..=......+.+.|..|++.+---.--...++..|.++++.|.+-...-|+
T Consensus 13 lvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv 70 (260)
T KOG1199|consen 13 LVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDV 70 (260)
T ss_pred EeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHH
Confidence 4566666555555566778887777666555555666777899999999654333333
No 472
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=31.12 E-value=97 Score=23.00 Aligned_cols=8 Identities=38% Similarity=0.193 Sum_probs=3.5
Q ss_pred CceEEEEc
Q 025730 218 KPKCIFLT 225 (249)
Q Consensus 218 ~~k~i~l~ 225 (249)
+.+.|.|+
T Consensus 74 g~~vi~iT 81 (120)
T cd05710 74 GATVIGLT 81 (120)
T ss_pred CCeEEEEE
Confidence 34444444
No 473
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=30.94 E-value=2e+02 Score=20.48 Aligned_cols=63 Identities=8% Similarity=0.018 Sum_probs=35.2
Q ss_pred ChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccccCCC-hHHHHHHHhhhhC
Q 025730 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW-TSSWIWGISSEHN 249 (249)
Q Consensus 180 y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG~~~~-~~e~i~~i~~~~~ 249 (249)
...|...++.+|++.+....+..+.-....|+..+. ++++|++. |+.+-. ....+...|+++|
T Consensus 12 ~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~--~aD~VIv~-----t~~vsH~~~~~vk~~akk~~ 75 (97)
T PF10087_consen 12 ERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIK--KADLVIVF-----TDYVSHNAMWKVKKAAKKYG 75 (97)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcC--CCCEEEEE-----eCCcChHHHHHHHHHHHHcC
Confidence 357888888899998888211222222334777774 56666642 232211 2244666676653
No 474
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=30.82 E-value=3e+02 Score=22.51 Aligned_cols=41 Identities=24% Similarity=0.341 Sum_probs=24.4
Q ss_pred hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 182 ~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
.....++..|.+++.+.. ...++++.+++.+.++++|.++.
T Consensus 101 ~v~~~l~~~G~~vi~lG~----~~p~~~l~~~~~~~~~d~v~lS~ 141 (201)
T cd02070 101 LVATMLEANGFEVIDLGR----DVPPEEFVEAVKEHKPDILGLSA 141 (201)
T ss_pred HHHHHHHHCCCEEEECCC----CCCHHHHHHHHHHcCCCEEEEec
Confidence 344455557777765542 34566676666656677666654
No 475
>COG4143 TbpA ABC-type thiamine transport system, periplasmic component [Coenzyme metabolism]
Probab=30.75 E-value=1.3e+02 Score=27.14 Aligned_cols=26 Identities=27% Similarity=0.348 Sum_probs=15.7
Q ss_pred HHHHHhhccCCceEEEEcCCCC-cccc
Q 025730 208 ELIADAVEREKPKCIFLTSPNN-PDGR 233 (249)
Q Consensus 208 e~l~~~i~~~~~k~i~l~~PnN-PTG~ 233 (249)
+.|++..+.+-...|++.+|.| -+|.
T Consensus 146 ksL~dL~~~~y~~~ii~qdPrtSspGl 172 (336)
T COG4143 146 KSLKDLVEPEYAGKIIYQDPRTSSPGL 172 (336)
T ss_pred ccHHHhcCccccCcEEecCCCCCCccH
Confidence 4466666534455677789965 4454
No 476
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=30.64 E-value=2.7e+02 Score=22.80 Aligned_cols=76 Identities=21% Similarity=0.144 Sum_probs=40.4
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-CChhHH---HHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-----C
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P-~y~~~~---~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~ 217 (249)
..+++|.|+...=..++..+...|..|++..- .-.... ......|.++..++.|-. |.+.+.+++++ .
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVS---KVEDANRLVEEAVNHFG 83 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCC---CHHHHHHHHHHHHHHcC
Confidence 45666666655555566667778888876321 111111 122234566766665322 45555555442 3
Q ss_pred CceEEEEc
Q 025730 218 KPKCIFLT 225 (249)
Q Consensus 218 ~~k~i~l~ 225 (249)
+.+.|+.+
T Consensus 84 ~id~vi~~ 91 (247)
T PRK12935 84 KVDILVNN 91 (247)
T ss_pred CCCEEEEC
Confidence 46777755
No 477
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=30.61 E-value=3.7e+02 Score=23.51 Aligned_cols=76 Identities=14% Similarity=0.045 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcCCC-CeEEEcCCCCh---hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCCCCccc
Q 025730 157 ELIDLIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (249)
Q Consensus 157 ~~l~~~~~~~~~pG-d~Vlv~~P~y~---~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~PnNPTG 232 (249)
.+++..++.+.+.| |.+++++--+. .+...++.+|..++.+-.. .-+.+.+++..+ .....||+.+-+--||
T Consensus 109 ~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaP---tt~~~rl~~i~~-~a~GFiY~vs~~GvTG 184 (265)
T COG0159 109 YGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAP---TTPDERLKKIAE-AASGFIYYVSRMGVTG 184 (265)
T ss_pred hhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCC---CCCHHHHHHHHH-hCCCcEEEEecccccC
Confidence 44555555554555 88999886664 5677778899988877421 124466666655 4457888888888889
Q ss_pred cCCC
Q 025730 233 RFSW 236 (249)
Q Consensus 233 ~~~~ 236 (249)
.-..
T Consensus 185 ~~~~ 188 (265)
T COG0159 185 ARNP 188 (265)
T ss_pred CCcc
Confidence 8755
No 478
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=30.44 E-value=3.7e+02 Score=23.41 Aligned_cols=53 Identities=15% Similarity=0.015 Sum_probs=34.4
Q ss_pred CCEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
+.|+-++++..++.+++.+- +.-.-.|+++.-.-..-....+.+|++++.++-
T Consensus 59 ~~vv~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 112 (299)
T TIGR01136 59 DTIIEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPA 112 (299)
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34777788888887776643 222245555554444555667789999999874
No 479
>PLN02654 acetate-CoA ligase
Probab=30.43 E-value=5.3e+02 Score=25.23 Aligned_cols=56 Identities=23% Similarity=0.273 Sum_probs=34.3
Q ss_pred cCCCCeEEEcCCCChhH---HHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 167 LDPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 167 ~~pGd~Vlv~~P~y~~~---~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
+++||.|.+.-|.-..+ ...+...|+.++.+.. .+..+++...+++.++++|+.+.
T Consensus 142 v~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~----~~~~~~l~~~l~~~~~~~li~~~ 200 (666)
T PLN02654 142 VKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFA----GFSAESLAQRIVDCKPKVVITCN 200 (666)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCC----CCCHHHHHHHHHhcCceEEEEcC
Confidence 56788888776665433 2333446776665542 34567777777766777777554
No 480
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=30.42 E-value=2e+02 Score=24.94 Aligned_cols=71 Identities=23% Similarity=0.170 Sum_probs=0.0
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEE-EcCC
Q 025730 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSP 227 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~-l~~P 227 (249)
|++-.|+.++..++-.....+++.++...-+|. ...++..+.+++. +..+.+.|.+.+++.++++++ -+||
T Consensus 5 ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g--~~l~~~~~~~~~~------G~l~~e~l~~~l~e~~i~llIDATHP 76 (257)
T COG2099 5 ILLLGGTSDARALAKKLAAAPVDIILSSLTGYG--AKLAEQIGPVRVG------GFLGAEGLAAFLREEGIDLLIDATHP 76 (257)
T ss_pred EEEEeccHHHHHHHHHhhccCccEEEEEccccc--ccchhccCCeeec------CcCCHHHHHHHHHHcCCCEEEECCCh
No 481
>PRK06194 hypothetical protein; Provisional
Probab=30.34 E-value=3.3e+02 Score=22.99 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=41.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH---HHCCCEEEEecCCCCCCCCHHHHHHhhcc-----CC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~---~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~~ 218 (249)
..+++|.|+...=..++..+++.|.+|++.+-.-....... ...|.++..+..+- -|.+.+++.++. .+
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV---SDAAQVEALADAALERFGA 83 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC---CCHHHHHHHHHHHHHHcCC
Confidence 45677766655555666677888988887654322222222 12356666665432 245556555432 24
Q ss_pred ceEEEEc
Q 025730 219 PKCIFLT 225 (249)
Q Consensus 219 ~k~i~l~ 225 (249)
.++|+-+
T Consensus 84 id~vi~~ 90 (287)
T PRK06194 84 VHLLFNN 90 (287)
T ss_pred CCEEEEC
Confidence 5666633
No 482
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=30.11 E-value=5.2e+02 Score=25.12 Aligned_cols=56 Identities=20% Similarity=0.194 Sum_probs=32.4
Q ss_pred cCCCCeEEEcCCCChh---HHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 167 LDPGDKIVDCPPTFTM---YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 167 ~~pGd~Vlv~~P~y~~---~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
+++||.|.+.-|.-.. ....+...|+..+.+.. .+..+++...+++.++++|+.+.
T Consensus 114 v~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~----~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 114 ISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFD----GYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCC----CCCHHHHHHHHHhcCCCEEEEcc
Confidence 5677877776655442 22233336665555532 23567777777766777777543
No 483
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=29.94 E-value=3.9e+02 Score=25.46 Aligned_cols=54 Identities=9% Similarity=0.238 Sum_probs=33.9
Q ss_pred CCCeEEEcCCCChhHHHHHHHCCCEEEEec-CCCCCCCCH---HHHHHhhccCCceEEEEc
Q 025730 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNV---ELIADAVEREKPKCIFLT 225 (249)
Q Consensus 169 pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~-~~~~~~id~---e~l~~~i~~~~~k~i~l~ 225 (249)
.+..+++..+.|. .+++.+|.+.+.+- ...+..+.+ .++.+.+++.++++||+.
T Consensus 370 k~r~vvt~H~af~---YLa~~YGL~~~~~~~~~~~~ePS~~~L~~Li~~IK~~~V~~IF~E 427 (479)
T TIGR03772 370 SRRHLITTHDAYS---YLGQAYGLNIAGFVTPNPAVEPSLADRRRLTRTIENLKVPAVFLE 427 (479)
T ss_pred cCCEEEEECCcHH---HHHHHCCCeEEeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3467888877664 34566899887653 334445554 444555566788888854
No 484
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=29.88 E-value=3.3e+02 Score=22.70 Aligned_cols=52 Identities=23% Similarity=0.104 Sum_probs=30.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEE--EcCCCChhHHHHHHHCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIV--DCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vl--v~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
..|+..+|+..+..++..+-. .|=+++ ++.-.-.......+.+|++++.++.
T Consensus 51 ~~vv~~ssGN~g~alA~~a~~-~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 51 GVIIESTGGNTGIALAAAAAR-LGLKCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred CEEEEeCCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 345555566777666665432 453333 4433333555667779999999974
No 485
>PRK08589 short chain dehydrogenase; Validated
Probab=29.64 E-value=2.4e+02 Score=23.78 Aligned_cols=52 Identities=6% Similarity=-0.007 Sum_probs=30.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHH---HCCCEEEEecC
Q 025730 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---VNGAAVVKVPR 199 (249)
Q Consensus 147 ~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~---~~G~~v~~v~~ 199 (249)
..++||.|+...=..++..+++.|.+|++..-. .......+ ..+.++..+..
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~ 61 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHV 61 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEe
Confidence 356676666555555666788889888887655 43222221 23555555543
No 486
>PRK08811 uroporphyrinogen-III synthase; Validated
Probab=29.37 E-value=1e+02 Score=26.61 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=36.5
Q ss_pred CCCCeEEEcCCCCh--hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-CCceEEEEcCCC
Q 025730 168 DPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPN 228 (249)
Q Consensus 168 ~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-~~~k~i~l~~Pn 228 (249)
-.|.+|++.-|.-. ......+..|++++.+|.-+-...+...+...+.+ .+.+.|+++++|
T Consensus 16 l~g~~IlvTRp~~q~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~l~~l~~~d~iiftS~N 79 (266)
T PRK08811 16 DAAWTLISLRPSGEHAPLRRAVARHGGRLLALSPWRLQRLDTAQARDALRQALAAPIVVFTSPA 79 (266)
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHHCCCcEEEcCceeecCCCchhHHHHHhhcccCCEEEEECHH
Confidence 35789999988875 55666777999999998411000111122222221 245678888876
No 487
>PRK05867 short chain dehydrogenase; Provisional
Probab=28.97 E-value=2.1e+02 Score=23.65 Aligned_cols=79 Identities=11% Similarity=0.125 Sum_probs=42.1
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHH---HHCCCEEEEecCCCCCCCCHHHHHHhhcc----
Q 025730 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (249)
Q Consensus 144 ~~~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~---~~~G~~v~~v~~~~~~~id~e~l~~~i~~---- 216 (249)
+....+++|.|+...=..+...+.+.|.+|++..-.-....... +..|.++..+..|- -|.+.+++++++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV---SQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC---CCHHHHHHHHHHHHHH
Confidence 33345677766665555666677888988887654433222222 22355555555332 244555554431
Q ss_pred -CCceEEEEc
Q 025730 217 -EKPKCIFLT 225 (249)
Q Consensus 217 -~~~k~i~l~ 225 (249)
.+.+.++.+
T Consensus 84 ~g~id~lv~~ 93 (253)
T PRK05867 84 LGGIDIAVCN 93 (253)
T ss_pred hCCCCEEEEC
Confidence 256666633
No 488
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=28.92 E-value=3e+02 Score=26.61 Aligned_cols=81 Identities=21% Similarity=0.246 Sum_probs=0.0
Q ss_pred CCCCEEEeCCHHHHHHHHHHHh---cCCCCeEEEc-CCCChhHHHHHHH----CCCEEEEecCCCCCCCCHHHHHHhhcc
Q 025730 145 ESDHILVGCGADELIDLIMRCV---LDPGDKIVDC-PPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER 216 (249)
Q Consensus 145 ~~~~I~vt~Ga~~~l~~~~~~~---~~pGd~Vlv~-~P~y~~~~~~~~~----~G~~v~~v~~~~~~~id~e~l~~~i~~ 216 (249)
.|.-|+-+.|+...-....... +.+||.++.. +|.|.......-. +|+.++.++-...+ |++.+.+.+++
T Consensus 185 ~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~--~~~~~~~~ie~ 262 (528)
T COG0365 185 KPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFY--SPERLWEALEK 262 (528)
T ss_pred CCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCC--CHHHHHHHHHH
Q ss_pred CCceEEEEcCCC
Q 025730 217 EKPKCIFLTSPN 228 (249)
Q Consensus 217 ~~~k~i~l~~Pn 228 (249)
.++..++ ++|+
T Consensus 263 ~~vt~~~-tsPT 273 (528)
T COG0365 263 YKVTIFG-TSPT 273 (528)
T ss_pred hCCceEe-eCHH
No 489
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=28.81 E-value=2.4e+02 Score=23.56 Aligned_cols=31 Identities=16% Similarity=0.089 Sum_probs=20.7
Q ss_pred CCEEEeCCH--HHHHHHHHHHhcCCCCeEEEcC
Q 025730 147 DHILVGCGA--DELIDLIMRCVLDPGDKIVDCP 177 (249)
Q Consensus 147 ~~I~vt~Ga--~~~l~~~~~~~~~pGd~Vlv~~ 177 (249)
..+++|.|+ ...=..+...+.+.|.+|++..
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~ 40 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTY 40 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEec
Confidence 456676666 3444555667788998888764
No 490
>KOG3424 consensus 40S ribosomal protein S24 [Translation, ribosomal structure and biogenesis]
Probab=28.72 E-value=80 Score=24.10 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=20.9
Q ss_pred CCcChHHHHHHHHHHcCCCCCCEEE
Q 025730 127 PDPESRRLRAALAKDSGLESDHILV 151 (249)
Q Consensus 127 p~~g~~~lr~~la~~~~~~~~~I~v 151 (249)
+...-.++||.||+.|..++|.|++
T Consensus 33 a~vsK~EirEKla~mYkt~~d~V~v 57 (132)
T KOG3424|consen 33 ANVSKTEIREKLAKMYKTTPDAVFV 57 (132)
T ss_pred CCCCHHHHHHHHHHHhcCCcceEEE
Confidence 3445689999999999999998875
No 491
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=28.35 E-value=3.6e+02 Score=26.30 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=18.6
Q ss_pred hcCCCCeEEEcCCCCh--hHHHHHHHCCCEEEEec
Q 025730 166 VLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVP 198 (249)
Q Consensus 166 ~~~pGd~Vlv~~P~y~--~~~~~~~~~G~~v~~v~ 198 (249)
+..-|-.+...+|.|. .....++..+.+++...
T Consensus 159 ~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~ 193 (652)
T TIGR01217 159 TASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTV 193 (652)
T ss_pred HHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEc
Confidence 4455666666667765 34444455666666553
No 492
>TIGR02746 TraC-F-type type-IV secretion system protein TraC. The protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase.
Probab=28.34 E-value=1.2e+02 Score=30.58 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 153 ~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
+|=+-.+..++..+...|.+|++.+|.. .|...++..|+.++.+..
T Consensus 441 sGKS~~~~~l~~~~~~~g~~v~iiD~~~-sy~~l~~~~gg~~i~~~~ 486 (797)
T TIGR02746 441 AGKSFFMQELIVDNLSRGGKVWVIDVGR-SYKKLCEMLGGTYIEFSP 486 (797)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEEeCCC-CHHHHHHHcCCEEEEecC
Confidence 3335556666666677889999999985 577778889988777653
No 493
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=28.31 E-value=1.9e+02 Score=26.15 Aligned_cols=73 Identities=19% Similarity=0.132 Sum_probs=43.8
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHH----HHHHHCC--CEEEEecCCCCCCCCHHHHHHhhccCCc
Q 025730 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNG--AAVVKVPRKSDFSLNVELIADAVEREKP 219 (249)
Q Consensus 146 ~~~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~----~~~~~~G--~~v~~v~~~~~~~id~e~l~~~i~~~~~ 219 (249)
+..|++|.|+--.=......+++.|+.|++.+..-..+. ...+..+ -.+..+..| --|.+.|++.++..+.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~D---l~D~~~L~kvF~~~~f 78 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGD---LNDAEALEKLFSEVKF 78 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEec---cCCHHHHHHHHhhcCC
Confidence 346889888876666666678889999988776543322 2222233 333333322 2367888887765444
Q ss_pred eE
Q 025730 220 KC 221 (249)
Q Consensus 220 k~ 221 (249)
..
T Consensus 79 d~ 80 (343)
T KOG1371|consen 79 DA 80 (343)
T ss_pred ce
Confidence 33
No 494
>PRK09375 quinolinate synthetase; Provisional
Probab=28.00 E-value=1.7e+02 Score=26.34 Aligned_cols=77 Identities=21% Similarity=0.319 Sum_probs=44.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEec--CCCCCCCCHHHHHHhhccCCceEEEEc
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLT 225 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~--~~~~~~id~e~l~~~i~~~~~k~i~l~ 225 (249)
+++.|++ -++..+- . +.++|+|+ .-|...+-......-+.+++..+ +.-...+++++++++-+ ..+.+.+++
T Consensus 139 D~~cTSS--nAl~iv~-~-~~~~~~Il-F~PD~~Lg~~v~~l~~k~vilw~G~C~vH~~~~~e~i~~~r~-~~Pda~Vv~ 212 (319)
T PRK09375 139 DIVCTSS--NAVKIVE-A-LPQGKKIL-FLPDQHLGRYVAKQTGADIILWPGHCIVHEEFTAEDLERLRA-EYPDAKVLV 212 (319)
T ss_pred CeEEeCH--HHHHHHh-c-cCCCCeEE-EeCchHHHHHHHHcCCCEEEccCCcchhccCcCHHHHHHHHH-HCcCCeEEE
Confidence 4555443 3343333 2 23556544 45555444444445677766554 22224678899988776 457788889
Q ss_pred CCCCc
Q 025730 226 SPNNP 230 (249)
Q Consensus 226 ~PnNP 230 (249)
+|+-+
T Consensus 213 HPEc~ 217 (319)
T PRK09375 213 HPECP 217 (319)
T ss_pred ecCCC
Confidence 99854
No 495
>COG2235 ArcA Arginine deiminase [Amino acid transport and metabolism]
Probab=27.99 E-value=1.5e+02 Score=27.63 Aligned_cols=67 Identities=19% Similarity=0.193 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHH------HHHHHHHHh-cCCCCeEEEcCCCChhHHHHHHHCCCEEEEecC
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADE------LIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~------~l~~~~~~~-~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~ 199 (249)
...+.+.+++.+|++.=+++-+.|++. -.+.....+ +.||..|.+..-.|.. ...+..|.+++.++.
T Consensus 314 ~~~~~~~~~~~lgi~~~~~I~~gg~d~i~~~reqw~dg~N~L~i~PG~Vv~ydrN~~tN--~~l~e~Gi~Vi~I~~ 387 (409)
T COG2235 314 LGDLLEYLAEALGIDKVRLIETGGGDVIAAEREQWDDGTNTLTIAPGVVVAYDRNIYTN--NLLREAGIKVITIPG 387 (409)
T ss_pred chhHHHHHHHHhCCCcceEEEeCCCccchhhHHHhhcCCceEEecCCEEEeecCCccch--hhHHHcCcEEEEEec
Confidence 567899999999998878888888443 221111111 4576555555555654 556779999999984
No 496
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=27.82 E-value=2.9e+02 Score=21.43 Aligned_cols=69 Identities=12% Similarity=0.125 Sum_probs=34.7
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcCC
Q 025730 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (249)
Q Consensus 149 I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~P 227 (249)
|+++.|+...=..++..+++.|-+|....-.-..... ..+.+++..+. .|++.+.+++. +...|+.+-+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-----~d~~~~~~al~--~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-----FDPDSVKAALK--GADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-----TCHHHHHHHHT--TSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeee-----hhhhhhhhhhh--hcchhhhhhh
Confidence 3444443333334555556666555544333222222 34555554433 46678888775 4566665543
No 497
>PRK05090 hypothetical protein; Validated
Probab=27.35 E-value=68 Score=23.41 Aligned_cols=27 Identities=19% Similarity=0.206 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHcCCCCCCEEEeCCHHH
Q 025730 131 SRRLRAALAKDSGLESDHILVGCGADE 157 (249)
Q Consensus 131 ~~~lr~~la~~~~~~~~~I~vt~Ga~~ 157 (249)
..++.+.||+.|+++..+|-+..|.+.
T Consensus 48 N~ali~~LAk~l~v~ks~I~i~~G~ts 74 (95)
T PRK05090 48 NAHLLKFLAKQFRVAKSQVVIEKGELG 74 (95)
T ss_pred HHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 678999999999999999999999763
No 498
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=27.04 E-value=2.9e+02 Score=21.21 Aligned_cols=37 Identities=22% Similarity=0.165 Sum_probs=17.8
Q ss_pred HHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC
Q 025730 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (249)
Q Consensus 186 ~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~ 226 (249)
..+.+|.+++.+.. ...++++.++..++++.+|.+++
T Consensus 22 ~L~~~GfeVidLG~----~v~~e~~v~aa~~~~adiVglS~ 58 (128)
T cd02072 22 AFTEAGFNVVNLGV----LSPQEEFIDAAIETDADAILVSS 58 (128)
T ss_pred HHHHCCCEEEECCC----CCCHHHHHHHHHHcCCCEEEEec
Confidence 33445666555443 12345554444435555555543
No 499
>PRK06484 short chain dehydrogenase; Validated
Probab=26.98 E-value=3e+02 Score=25.81 Aligned_cols=73 Identities=14% Similarity=0.107 Sum_probs=40.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCChhHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhcc-----CCceEE
Q 025730 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (249)
Q Consensus 148 ~I~vt~Ga~~~l~~~~~~~~~pGd~Vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~-----~~~k~i 222 (249)
.++||.|+...=..+...+.+.|..|++..-.-.......+..|.++..+..|-. |.+.+++++++ .+..++
T Consensus 7 ~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 7 VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVS---DEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccC---CHHHHHHHHHHHHHHhCCCCEE
Confidence 4666666655555566677888988877643333334444445666655554321 44555554432 245555
Q ss_pred E
Q 025730 223 F 223 (249)
Q Consensus 223 ~ 223 (249)
+
T Consensus 84 i 84 (520)
T PRK06484 84 V 84 (520)
T ss_pred E
Confidence 5
No 500
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed
Probab=26.97 E-value=2.8e+02 Score=25.24 Aligned_cols=54 Identities=20% Similarity=0.350 Sum_probs=37.6
Q ss_pred CCeEEEcCCCCh-hHHHHHHHCCCEEEEecCCCCCCCCHHHHHHhhccCCceEEEEcC-CCCcc
Q 025730 170 GDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS-PNNPD 231 (249)
Q Consensus 170 Gd~Vlv~~P~y~-~~~~~~~~~G~~v~~v~~~~~~~id~e~l~~~i~~~~~k~i~l~~-PnNPT 231 (249)
|.+|++.+.++. .+.......|+.++.+|.+. +++.+.+ .+...|+|++ |.+|.
T Consensus 167 ~~~V~viD~G~k~ni~~~L~~~G~~v~vvp~~~----~~~~i~~----~~~DGIiLsgGPgdp~ 222 (354)
T PRK12838 167 GKHVALIDFGYKKSILRSLSKRGCKVTVLPYDT----SLEEIKN----LNPDGIVLSNGPGDPK 222 (354)
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCeEEEEECCC----CHHHHhh----cCCCEEEEcCCCCChH
Confidence 568888888764 45666667899999998532 4555543 3567888884 77774
Done!