RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 025730
(249 letters)
>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD
{Salmonella enterica [TaxId: 28901]}
Length = 355
Score = 88.3 bits (217), Expect = 5e-21
Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 3/155 (1%)
Query: 89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD 147
LG P+ ++ AN NP G P V+ AL L YPD + L ALA+ + +
Sbjct: 16 VLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPAS 75
Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207
IL G G E I + + + + P F Y A +G + + + +
Sbjct: 76 WILAGNGETESIFTVASGLKPR--RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL 133
Query: 208 ELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIW 242
C+FL +PNNP G
Sbjct: 134 TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQA 168
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium
lapideum [TaxId: 32060]}
Length = 388
Score = 87.5 bits (216), Expect = 1e-20
Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 19/186 (10%)
Query: 71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPY 124
+ + P L + + + + D+ A E + P + EA G+ ++
Sbjct: 7 VESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGP 65
Query: 125 IYPDPESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
+P LR A+A+ +D+ILV G + I +M +++PGD+++ P
Sbjct: 66 AAGEPR---LREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122
Query: 179 TFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGRFSW 236
+ Y + V +P + F ++ E I A+ K K + +P+NP G
Sbjct: 123 FWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYT 181
Query: 237 TSSWIW 242
Sbjct: 182 PDEVRA 187
>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum)
[TaxId: 4682]}
Length = 425
Score = 82.1 bits (202), Expect = 1e-18
Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 24/129 (18%)
Query: 123 PYIYPD---PESRRLRAALAKDSGL------ESDHILVGCGADELIDLIMR--------C 165
Y + S L + + + + +I+ G G +LI ++
Sbjct: 91 SYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTAT 150
Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225
P K+V P + ++ ++ N + + +T
Sbjct: 151 PDAPESKVVAHAPFYPVFREQTKYFDKKGY------VWAGNAANYVNVSN-PEQYIEMVT 203
Query: 226 SPNNPDGRF 234
SPNNP+G
Sbjct: 204 SPNNPEGLL 212
>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC
{Escherichia coli [TaxId: 562]}
Length = 354
Score = 81.4 bits (199), Expect = 2e-18
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 21/182 (11%)
Query: 64 DSFIRSHLRKLKPYQPILPFEVLSIQLGRKP--EDIVKIDANENPYGPPPEVREALGQLK 121
R ++R L PYQ R+ V ++ANE P ++ +
Sbjct: 5 TDLARENVRNLTPYQS-----------ARRLGGNGDVWLNANEYPTAVEFQLTQQTLNR- 52
Query: 122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181
YP+ + + + A+ +G++ + +LV GADE I+L++R +PG + P
Sbjct: 53 ----YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTY 108
Query: 182 MY-EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW 240
A G VP ++ L+++ I+D + + K +++ SPNNP G+ +
Sbjct: 109 GMYSVSAETIGVECRTVPTLDNWQLDLQGISD--KLDGVKVVYVCSPNNPTGQLINPQDF 166
Query: 241 IW 242
Sbjct: 167 RT 168
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 80.3 bits (197), Expect = 4e-18
Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 90 LGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPESRRLRAALAK--- 140
+ +D++ + E + P ++E G + E LR A+A+
Sbjct: 20 IAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLE---LREAIAEKLK 76
Query: 141 ----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
I+V GA++ + + L G++++ P F Y + G V+
Sbjct: 77 KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 136
Query: 197 VPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGRF 234
VP + F LNV+ + V +K + + + SP NP G
Sbjct: 137 VPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAV 175
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus
thermophilus [TaxId: 274]}
Length = 382
Score = 79.8 bits (196), Expect = 7e-18
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFP 123
+ ++ +KP + +++L R+ D+V + A E + P V+EA + L
Sbjct: 2 RGLSRRVQAMKPS-ATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 124 YI-YPDPE-SRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175
Y P LR ALA+ + + +V G + + + + +LDPGD+++
Sbjct: 61 KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIV 120
Query: 176 CPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGR 233
P + Y G VV+V F + E + A+ + K + + SPNNP G
Sbjct: 121 LSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI-TPRTKALVVNSPNNPTGA 179
>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase
HisC {Thermotoga maritima [TaxId: 2336]}
Length = 334
Score = 55.6 bits (132), Expect = 1e-09
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 21/102 (20%)
Query: 71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIY 126
++ PY+ + D + NENP+ P ++ + L Y
Sbjct: 8 AKRAYPYET-------------EKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRI-Y 53
Query: 127 PDPESRRLRAALAK---DSGLESDHILVGCGADELIDLIMRC 165
D L + L +++ VG GADE+I ++M
Sbjct: 54 YDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLM 95
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus
thermophilus [TaxId: 274]}
Length = 368
Score = 53.6 bits (127), Expect = 5e-09
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 12/185 (6%)
Query: 71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP 129
K F +S L ++ V + PPP + EA+ + L Y P
Sbjct: 7 TEAAKES----IFPRMS-GLAQRL-GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPP 60
Query: 130 E-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
LR ALA++ +E + ++V GA E + ++++ ++ PGD++V P F +Y DA
Sbjct: 61 AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAF 120
Query: 189 VNG--AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW--IWGI 244
+ G A +V++ + + + + + L +P NP G I +
Sbjct: 121 LAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARL 180
Query: 245 SSEHN 249
+ H+
Sbjct: 181 ARAHD 185
>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId:
4081]}
Length = 428
Score = 53.1 bits (126), Expect = 7e-09
Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 16/125 (12%)
Query: 88 IQLG----RKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPE-SRRLRAALAK-- 140
IQ+G + D+++ NP E + K + D R A+AK
Sbjct: 39 IQMGLAENQLCLDLIEDWIKRNP--KGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFM 96
Query: 141 ------DSGLESDHILVGCGADELIDLIMRCVLDPGDK-IVDCPPTFTMYEFDAAVNGAA 193
+ + +++ GA + I+ C+ DPGD +V P G
Sbjct: 97 EKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQ 156
Query: 194 VVKVP 198
++ +
Sbjct: 157 LIPIH 161
>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}
Length = 431
Score = 52.7 bits (125), Expect = 1e-08
Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 22/126 (17%)
Query: 92 RKPEDIVKIDANENPY-----------GPPPEVREALGQLKFPYI--YPDPE-SRRLRAA 137
I+++ EN P + G+ F + + D + A
Sbjct: 33 HNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKA 92
Query: 138 LAK--------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
+ + +H+++ GA + + C+ DPG+ ++ P + ++ D
Sbjct: 93 MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 152
Query: 190 NGAAVV 195
+
Sbjct: 153 RTGVEI 158
>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Leishmania major [TaxId: 5664]}
Length = 340
Score = 51.5 bits (121), Expect = 3e-08
Identities = 8/85 (9%), Positives = 24/85 (28%), Gaps = 3/85 (3%)
Query: 102 ANENPYGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADEL 158
N+ G P++ + + + + Y D + + + + G +
Sbjct: 5 VNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQT 64
Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMY 183
+ L P + ++
Sbjct: 65 NLIACSLALRPWEAVIATQLGHIST 89
>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga
maritima [TaxId: 2336]}
Length = 389
Score = 51.0 bits (120), Expect = 4e-08
Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 9/180 (5%)
Query: 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP 127
+ + PI + ++ I ++ + P E + + Y
Sbjct: 3 DRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYS 61
Query: 128 DPE-SRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180
LR A A ++ +++LV G E I + +PGD+I+ P +
Sbjct: 62 HSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFY 121
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSW 240
Y A + G ++ V R+ + + ++ E+ K I L++P NP G
Sbjct: 122 ANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEM 181
>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga
maritima [TaxId: 2336]}
Length = 375
Score = 50.8 bits (120), Expect = 5e-08
Identities = 39/174 (22%), Positives = 65/174 (37%), Gaps = 11/174 (6%)
Query: 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--KFPY 124
+ + ++ + + + L +K ED++ + A E + P V E + K
Sbjct: 1 VSRRISEIPIS-KTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV 59
Query: 125 IYPDPE-SRRLRAALAKD------SGLESDHILVGCGADELIDLIMRCVLDPGDK-IVDC 176
Y DP LR +AK + D ++V GA + + +LDPGD+ IV
Sbjct: 60 KYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFS 119
Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
P + G V S + + K K + + SPNNP
Sbjct: 120 PVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNP 173
>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY
{Escherichia coli [TaxId: 562]}
Length = 361
Score = 46.0 bits (107), Expect = 1e-06
Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 107 YGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
+ P + EAL Q L + Y ++ AA+A + ++S ++ G +
Sbjct: 11 FATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM 70
Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
+ ++R + G+ +V P + + N V+ V
Sbjct: 71 VSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVA 110
>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus
scrofa), cytosolic form [TaxId: 9823]}
Length = 412
Score = 44.2 bits (103), Expect = 6e-06
Identities = 17/146 (11%), Positives = 36/146 (24%), Gaps = 14/146 (9%)
Query: 97 IVKIDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGC 153
I + + Y P E R +L P + +R+ +
Sbjct: 60 IANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQS------LGGTGALR 113
Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213
E + + + PT+ + G ++ R D +
Sbjct: 114 IGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGF 173
Query: 214 VEREK-----PKCIFLTSPNNPDGRF 234
+ + + +NP G
Sbjct: 174 LSDLENAPEFSIFVLHACAHNPTGTD 199
>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas
putida [TaxId: 303]}
Length = 345
Score = 43.7 bits (101), Expect = 8e-06
Identities = 19/151 (12%), Positives = 42/151 (27%), Gaps = 3/151 (1%)
Query: 102 ANENPYGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADEL 158
+++N G PEV +AL + Y D + +++ + + + LV G
Sbjct: 8 SSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAAN 67
Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK 218
+ G+ E A + K+ + ++++ +
Sbjct: 68 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTRE 127
Query: 219 PKCIFLTSPNNPDGRFSWTSSWIWGISSEHN 249
T+ T E
Sbjct: 128 KVGDVHTTQPACVSITQATEVGSIYTLDEIE 158
>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I
{Human (Homo sapiens) [TaxId: 9606]}
Length = 418
Score = 42.4 bits (98), Expect = 3e-05
Identities = 37/173 (21%), Positives = 57/173 (32%), Gaps = 23/173 (13%)
Query: 95 EDIVKIDANENPYGPPPEVREALGQL----KFPYIYPDPE-SRRLRAALA----KDSGLE 145
D+V + + PP EA Y L LA + G E
Sbjct: 25 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQE 84
Query: 146 SD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202
D ++LV G + + ++D GD+++ P F YE + G V V K
Sbjct: 85 IDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPG 144
Query: 203 FSLNVELIADA-----------VEREKPKCIFLTSPNNPDGRFSWTSSWIWGI 244
N EL + + + K + L +PNNP G+
Sbjct: 145 PIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVA 197
>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL
{Escherichia coli [TaxId: 562]}
Length = 382
Score = 40.1 bits (92), Expect = 2e-04
Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 19/184 (10%)
Query: 72 RKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYI 125
KL + F +S L ++ + + + P ++E L G ++ +
Sbjct: 6 SKLPQLGTTI-FTQMS-ALAQQH-QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPM 62
Query: 126 YPDPESRRLRAALA----KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
LR A+A + G + D I V GA E + + ++ GD+++ P
Sbjct: 63 TGVQA---LREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDP 119
Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTS 238
++ Y A++G V ++ + A+ E+ + + L +P+NP +
Sbjct: 120 SYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA 179
Query: 239 SWIW 242
+
Sbjct: 180 DFAA 183
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Thermotoga maritima [TaxId: 2336]}
Length = 343
Score = 38.2 bits (87), Expect = 5e-04
Identities = 26/149 (17%), Positives = 44/149 (29%), Gaps = 9/149 (6%)
Query: 108 GPPPEVREALGQLKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165
P E+R+A+ Q + DP L A+ G E + V G IM
Sbjct: 11 KPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKE-AALFVPSGTMGNQVSIMAH 69
Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN------VELIADAVEREKP 219
+ I++ YE A + V+ P + + +
Sbjct: 70 TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRT 129
Query: 220 KCIFLTSPNNPDGRFSWTSSWIWGISSEH 248
I + + +N G I I +
Sbjct: 130 SLIAIENTHNRSGGRVVPLENIKEICTIA 158
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Yeast (Hansenula saturnus) [TaxId: 4906]}
Length = 341
Score = 33.5 bits (75), Expect = 0.018
Identities = 13/105 (12%), Positives = 24/105 (22%)
Query: 70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP 129
+ I + + Y P+
Sbjct: 215 QYGRQDDVIAIDASFTSEKTKEQTLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNE 274
Query: 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174
+ A+ G+ +D + G LI LI PG ++
Sbjct: 275 GTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALIKEDYFKPGANVL 319
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Pseudomonas sp., strain ACP [TaxId: 306]}
Length = 338
Score = 32.3 bits (72), Expect = 0.042
Identities = 8/51 (15%), Positives = 21/51 (41%)
Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174
Y P+ + A+ G+ +D + G +I+++ G +++
Sbjct: 268 YGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIEMVRNGEFPEGSRVL 318
>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}
Length = 394
Score = 30.9 bits (68), Expect = 0.13
Identities = 26/173 (15%), Positives = 62/173 (35%), Gaps = 16/173 (9%)
Query: 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAAL 138
++++ Q ++V + + + PPE+ E L + Y P E + +
Sbjct: 19 WDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGPTEE---YKKTV 75
Query: 139 AK------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA 192
K +++D I+ G + +R PGD ++ P + +
Sbjct: 76 KKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQER 135
Query: 193 AVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGRFSWTSSWIW 242
+++ ++++ + + + + K + SP+NP GR
Sbjct: 136 KIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQK 188
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 551
Score = 27.3 bits (60), Expect = 2.4
Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 18/88 (20%)
Query: 62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL---- 117
T D+ + + + L + QLGR +V + ++ Y PE R L
Sbjct: 457 TKDATLETVMATLPNLHQSSLQMSIVWQLGRDQPIMVPLGQHQEEYFSGPEPRAVLEKFR 516
Query: 118 --------------GQLKFPYIYPDPES 131
+L PY Y P
Sbjct: 517 EELAIMDKEIEVRNEKLDIPYEYLRPSI 544
>d1mioa_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha
chain {Clostridium pasteurianum [TaxId: 1501]}
Length = 525
Score = 26.7 bits (58), Expect = 3.5
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 13/78 (16%)
Query: 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVE 208
+GC + + G + F+ M E D G +K +
Sbjct: 76 IGCSFYTWGGRRFKSKPENGTGLNFNEYVFSTDMQESDIVFGGVNKLK-----------D 124
Query: 209 LIADAVEREKPKCIFLTS 226
I +A E P I + +
Sbjct: 125 AIHEAYEMFHPAAIGVYA 142
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein
kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 322
Score = 25.0 bits (54), Expect = 8.8
Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Query: 93 KPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVG 152
K +++ E P G+ Y + L + G
Sbjct: 209 KELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSG 268
Query: 153 CGADELIDLIMRC-VLDPGDKI 173
+ E D + +C + +P ++
Sbjct: 269 VFSLEFQDFVNKCLIKNPAERA 290
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.415
Gapped
Lambda K H
0.267 0.0562 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 970,289
Number of extensions: 46162
Number of successful extensions: 178
Number of sequences better than 10.0: 1
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 25
Length of query: 249
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 166
Effective length of database: 1,268,006
Effective search space: 210488996
Effective search space used: 210488996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.2 bits)