Query 025738
Match_columns 249
No_of_seqs 85 out of 102
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 16:31:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025738.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025738hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kd2_A FAS apoptotic inhibitor 38.4 13 0.00046 29.0 1.7 9 157-165 34-42 (94)
2 4gym_A Glyoxalase/bleomycin re 17.3 53 0.0018 23.9 1.5 10 227-236 117-126 (149)
3 3rri_A Glyoxalase/bleomycin re 13.2 80 0.0027 22.2 1.5 10 227-236 112-121 (135)
4 3sk2_A EHPR; antibiotic resist 12.3 88 0.003 22.2 1.5 11 226-236 114-124 (132)
5 3ey7_A Biphenyl-2,3-DIOL 1,2-d 11.3 1E+02 0.0035 21.2 1.5 11 226-236 113-123 (133)
6 2l6o_A Uncharacterized protein 11.1 71 0.0024 25.4 0.8 27 189-215 1-31 (114)
7 2p25_A Glyoxalase family prote 10.8 1.1E+02 0.0037 20.7 1.5 11 226-236 110-120 (126)
8 3e5d_A Putative glyoxalase I; 10.7 1.1E+02 0.0037 20.9 1.5 10 227-236 112-121 (127)
9 1xqa_A Glyoxalase/bleomycin re 10.5 78 0.0027 21.5 0.7 12 225-236 96-107 (113)
10 1xrk_A Bleomycin resistance pr 10.4 1.1E+02 0.0038 21.5 1.5 11 226-236 104-114 (124)
No 1
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A
Probab=38.41 E-value=13 Score=28.95 Aligned_cols=9 Identities=44% Similarity=1.114 Sum_probs=6.8
Q ss_pred EEEEcCcee
Q 025738 157 IMYCNGRKV 165 (249)
Q Consensus 157 tmyCNGRKv 165 (249)
..||||+|+
T Consensus 34 dVwvNG~~i 42 (94)
T 2kd2_A 34 DVWCNGQKM 42 (94)
T ss_dssp EEEESSSBC
T ss_pred EEEECCEEe
Confidence 367899886
No 2
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=17.34 E-value=53 Score=23.93 Aligned_cols=10 Identities=10% Similarity=-0.021 Sum_probs=8.8
Q ss_pred eeeeeCCCCC
Q 025738 227 SFHLINPDEC 236 (249)
Q Consensus 227 sfyMinPdG~ 236 (249)
++|.-|||||
T Consensus 117 ~~~f~DPDGn 126 (149)
T 4gym_A 117 GRSFHDLDGH 126 (149)
T ss_dssp EEEEECTTCC
T ss_pred EEEEEcCCCC
Confidence 5899999997
No 3
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=13.23 E-value=80 Score=22.19 Aligned_cols=10 Identities=40% Similarity=0.859 Sum_probs=9.0
Q ss_pred eeeeeCCCCC
Q 025738 227 SFHLINPDEC 236 (249)
Q Consensus 227 sfyMinPdG~ 236 (249)
+||+.||||+
T Consensus 112 ~~~~~DPdGn 121 (135)
T 3rri_A 112 TFFLIDPSNN 121 (135)
T ss_dssp EEEEECTTCC
T ss_pred EEEEECCCCC
Confidence 6999999986
No 4
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=12.26 E-value=88 Score=22.19 Aligned_cols=11 Identities=27% Similarity=0.619 Sum_probs=9.4
Q ss_pred ceeeeeCCCCC
Q 025738 226 ESFHLINPDEC 236 (249)
Q Consensus 226 EsfyMinPdG~ 236 (249)
..||+.||||+
T Consensus 114 ~~~~~~DPdGn 124 (132)
T 3sk2_A 114 RTFLISDPDGH 124 (132)
T ss_dssp EEEEEECTTCC
T ss_pred EEEEEECCCCC
Confidence 45899999987
No 5
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=11.30 E-value=1e+02 Score=21.16 Aligned_cols=11 Identities=36% Similarity=0.558 Sum_probs=9.3
Q ss_pred ceeeeeCCCCC
Q 025738 226 ESFHLINPDEC 236 (249)
Q Consensus 226 EsfyMinPdG~ 236 (249)
..||+.||||+
T Consensus 113 ~~~~~~DPdG~ 123 (133)
T 3ey7_A 113 TSFYFRDPDGN 123 (133)
T ss_dssp EEEEEECTTCC
T ss_pred EEEEEECCCCC
Confidence 46899999986
No 6
>2l6o_A Uncharacterized protein YP_926445.1; structural genomics, PSI-biology, protein structure initiati center for structural genomics, JCSG; NMR {Shewanella amazonensis}
Probab=11.09 E-value=71 Score=25.40 Aligned_cols=27 Identities=22% Similarity=0.326 Sum_probs=16.9
Q ss_pred eccceecCCCCC----CCCCCCcceeeEeee
Q 025738 189 IGAGVIPAGLGS----SGPDSGEQIIYMRAN 215 (249)
Q Consensus 189 mGAGVLP~~~g~----~~~~~dgElmYMRA~ 215 (249)
||||-.|..--. -.-.+|+||+|++-.
T Consensus 1 ~~~~~~~~~mi~WPailkl~gddELiYL~s~ 31 (114)
T 2l6o_A 1 MGAGQTPHPQLIWPALLKQQGCNELLPLRTN 31 (114)
T ss_dssp CCSSSCSCSSCCSSEEECCSSCCCCEEESSH
T ss_pred CCCCcccCcCccCCEEEecCCCceeEeecCH
Confidence 789988754100 011367899999854
No 7
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=10.82 E-value=1.1e+02 Score=20.70 Aligned_cols=11 Identities=18% Similarity=0.386 Sum_probs=8.9
Q ss_pred ceeeeeCCCCC
Q 025738 226 ESFHLINPDEC 236 (249)
Q Consensus 226 EsfyMinPdG~ 236 (249)
-.+|+.||||+
T Consensus 110 ~~~~~~DPdG~ 120 (126)
T 2p25_A 110 KMTFFFDPDGL 120 (126)
T ss_dssp EEEEEECTTCC
T ss_pred EEEEEECCCCC
Confidence 35889999986
No 8
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=10.68 E-value=1.1e+02 Score=20.93 Aligned_cols=10 Identities=10% Similarity=0.331 Sum_probs=8.4
Q ss_pred eeeeeCCCCC
Q 025738 227 SFHLINPDEC 236 (249)
Q Consensus 227 sfyMinPdG~ 236 (249)
.+|+.||||+
T Consensus 112 ~~~~~DPdG~ 121 (127)
T 3e5d_A 112 ESVVLDPEGN 121 (127)
T ss_dssp EEEEECTTSC
T ss_pred EEEEECCCCC
Confidence 4889999986
No 9
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=10.52 E-value=78 Score=21.50 Aligned_cols=12 Identities=17% Similarity=0.268 Sum_probs=9.6
Q ss_pred cceeeeeCCCCC
Q 025738 225 SESFHLINPDEC 236 (249)
Q Consensus 225 SEsfyMinPdG~ 236 (249)
...+|+.||||+
T Consensus 96 ~~~~~~~DPdG~ 107 (113)
T 1xqa_A 96 AYTFYVEAPGGF 107 (113)
T ss_dssp CEEEEEEETTTE
T ss_pred cEEEEEECCCCc
Confidence 357899999985
No 10
>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A
Probab=10.41 E-value=1.1e+02 Score=21.46 Aligned_cols=11 Identities=27% Similarity=0.465 Sum_probs=9.3
Q ss_pred ceeeeeCCCCC
Q 025738 226 ESFHLINPDEC 236 (249)
Q Consensus 226 EsfyMinPdG~ 236 (249)
-.||+.||||+
T Consensus 104 ~~~~~~DPdG~ 114 (124)
T 1xrk_A 104 REFALRDPAGN 114 (124)
T ss_dssp EEEEEECTTCC
T ss_pred CEEEEECCCCC
Confidence 46899999997
Done!