Citrus Sinensis ID: 025740

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccccccccccccccccccccccEEEEEcccccccccccccEEEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHcccEEEEEEEEEEccccccEEEEEccccccEEEEEEEEcccccEEEEEEEcccccEEEcccccccccccccccccccEEEEEEEccccEEEEccccccccccccEEEccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHcccccccccccccEEEEEccccccccccccccccccccccccccHHHHHHHHHccccccccEEEEEEccccccccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEccccccccEEEEEcccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccEEcccEEEEEEEEccccEEEEccccccccccccEccccccc
Coil and Loop (DISEMBL)
MYFAGFFSLGFLALVSSVhanggggwinaratfygggdasgtmggacgygnlysqgygtnTAALSTALFnnglscgscyeikcvndpkwclpgtimvtatnfcppnnalpnnaggwcnppqqhfdlsqpVFQHIAQYRAGvvpvaykrvpcgrrggirftingHSYFNLVLITNVGGAGDVHAVSIkgsrtgwqpmsrnwgqnwqsntylngqslsfevttsdgrtvtsynvapagwsfgrtysgaqfr
Flexible Loop (DISEMBL)
MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTsynvapagwsfgrtysgaqfr
Low Complexity Region (SEG)
MYfagffslgflalvssvHANGGGGWINARATFYgggdasgtmggacgYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCppnnalpnnaGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR
Disordered region (IsUnstruct)
*YFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY******
Disordered Region (DISOPRED)
*YFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR
Disordered Region (DISEMBL)
MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR
Disordered Region (DISPRO)
MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSG**F*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	249	2.2.26 [Sep-21-2011]
Q9C554	250	Expansin-A1 OS=Arabidopsi	yes	no	1.0	0.996	0.816	1e-118
O80622	253	Expansin-A15 OS=Arabidops	no	no	0.995	0.980	0.787	1e-112
Q9LDR9	249	Expansin-A10 OS=Arabidops	no	no	1.0	1.0	0.791	1e-108
Q9FMA0	255	Expansin-A14 OS=Arabidops	no	no	1.0	0.976	0.730	1e-104
Q0DHB7	246	Expansin-A4 OS=Oryza sati	yes	no	0.987	1.0	0.733	1e-104
A2Y5R6	246	Expansin-A4 OS=Oryza sati	N/A	no	0.987	1.0	0.733	1e-104
O22874	253	Expansin-A8 OS=Arabidopsi	no	no	0.995	0.980	0.703	1e-103
Q40636	251	Expansin-A2 OS=Oryza sati	no	no	0.903	0.896	0.755	1e-101
Q6ZGU9	291	Expansin-A5 OS=Oryza sati	no	no	0.911	0.780	0.735	2e-98
Q38866	255	Expansin-A2 OS=Arabidopsi	no	no	0.975	0.952	0.689	3e-98

>sp|Q9C554|EXPA1_ARATH Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1

 Score =  422 bits (1086), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/250 (81%), Positives = 224/250 (89%), Gaps = 1/250 (0%)

Query: 1   MYFAGFFSLGFL-ALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGT 59
           M    F  +  L A+ S V+   GGGW+NA ATFYGGGDASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 60  NTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNP 119
           NTAALSTALFNNGLSCG+C+EI+C ND KWCLPG+I+VTATNFCPPNNALPNNAGGWCNP
Sbjct: 61  NTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNP 120

Query: 120 PQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAG 179
           PQQHFDLSQPVFQ IAQYRAG+VPVAY+RVPC RRGGIRFTINGHSYFNLVLITNVGGAG
Sbjct: 121 PQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAG 180

Query: 180 DVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSF 239
           DVH+  +KGSRTGWQ MSRNWGQNWQSN+YLNGQSLSF+VTTSDG+T+ S NVA AGWSF
Sbjct: 181 DVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSF 240

Query: 240 GRTYSGAQFR 249
           G+T++GAQ R
Sbjct: 241 GQTFTGAQLR 250

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
Arabidopsis thaliana (taxid: 3702)

>sp|O80622|EXP15_ARATH Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2

 Score =  405 bits (1041), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/249 (78%), Positives = 215/249 (86%), Gaps = 1/249 (0%)

Query: 1   MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60
           M   G     F A+V SVH    G W+NA ATFYGG DASGTMGGACGYGNLYSQGYGTN
Sbjct: 6   MGLLGIALFCFAAMVCSVHGYDAG-WVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTN 64

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPP 120
           TAALSTALFNNGLSCG+C+EIKC +D  WCLPG I+VTATNFCPPNNALPNNAGGWCNPP
Sbjct: 65  TAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPP 124

Query: 121 QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGD 180
             HFDLSQPVFQ IAQY+AGVVPV+Y+RVPC RRGGIRFTINGHSYFNLVL+TNVGGAGD
Sbjct: 125 LHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGD 184

Query: 181 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           VH+V++KGSRT WQ MSRNWGQNWQSN  LNGQ+LSF+VT SDGRTV S N+APA WSFG
Sbjct: 185 VHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFG 244

Query: 241 RTYSGAQFR 249
           +T++G QFR
Sbjct: 245 QTFTGRQFR 253

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDR9|EXP10_ARATH Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1

 Score =  390 bits (1002), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/249 (79%), Positives = 223/249 (89%)

Query: 1   MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60
           M   GF  +  + +++S  +  GGGWINA ATFYGGGDASGTMGGACGYGNLYSQGYGT+
Sbjct: 1   MGHLGFLVMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTS 60

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPP 120
           TAALSTALFNNGLSCGSC+EI+C ND KWCLPG+I+VTATNFCPPNNAL NN GGWCNPP
Sbjct: 61  TAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPP 120

Query: 121 QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGD 180
            +HFDL+QPVFQ IAQYRAG+VPV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGD
Sbjct: 121 LEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 180

Query: 181 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           VH+ +IKGSRT WQ MSRNWGQNWQSN+YLNGQ+LSF+VTTSDGRTV S+N APAGWS+G
Sbjct: 181 VHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYG 240

Query: 241 RTYSGAQFR 249
           +T++G QFR
Sbjct: 241 QTFAGGQFR 249

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Plays a major role in control of leaf growth and influences the mechanical breakage behavior of the pedicel.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FMA0|EXP14_ARATH Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1

 Score =  378 bits (971), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/252 (73%), Positives = 206/252 (81%), Gaps = 3/252 (1%)

Query: 1   MYFAG--FFSLGFLALVSSVHANG-GGGWINARATFYGGGDASGTMGGACGYGNLYSQGY 57
           M F G    SL  + ++     +G   GW+NARATFYGG DASGTMGGACGYGNLYSQGY
Sbjct: 1   MEFFGKMIISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGY 60

Query: 58  GTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWC 117
           GTNTAALSTALFN G SCG+C++IKCV+DPKWC+ GTI VT TNFCPPN A  NNAGGWC
Sbjct: 61  GTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWC 120

Query: 118 NPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGG 177
           NPPQ HFDL+QP+F  IAQY+AGVVPV Y+RV C R+GGIRFTINGHSYFNLVLITNV G
Sbjct: 121 NPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAG 180

Query: 178 AGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGW 237
           AGDV +VSIKG+ T WQ MSRNWGQNWQSN  L+GQ+LSF+VTTSDGRTV S N  P  W
Sbjct: 181 AGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNW 240

Query: 238 SFGRTYSGAQFR 249
           SFG+TY+G QFR
Sbjct: 241 SFGQTYTGKQFR 252

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0DHB7|EXPA4_ORYSJ Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/248 (73%), Positives = 210/248 (84%), Gaps = 2/248 (0%)

Query: 1   MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60
           M  AG   L FLA  +S  A G GGW +A ATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 1   MAIAGVLFLLFLARQAS--AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 58

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPP 120
           TAALSTALFN+G +CGSCYE++C N    CLPG+I VTATNFCPPN  LP++ GGWCNPP
Sbjct: 59  TAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPP 118

Query: 121 QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGD 180
           + HFD+++P F HIAQYRAG+VPV+++RVPC ++GG+RFT+NGHSYFNLVL+TNV GAGD
Sbjct: 119 RPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGD 178

Query: 181 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           V +VSIKGSRTGWQPMSRNWGQNWQSN +L+GQSLSF+VT SDGRTVTS NVA  GW FG
Sbjct: 179 VRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFG 238

Query: 241 RTYSGAQF 248
           +T+ G QF
Sbjct: 239 QTFEGGQF 246

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Required for normal plant growth. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2Y5R6|EXPA4_ORYSI Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/248 (73%), Positives = 210/248 (84%), Gaps = 2/248 (0%)

Query: 1   MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60
           M  AG   L FLA  +S  A G GGW +A ATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 1   MAIAGVLFLLFLARQAS--AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 58

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPP 120
           TAALSTALFN+G +CGSCYE++C N    CLPG+I VTATNFCPPN  LP++ GGWCNPP
Sbjct: 59  TAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPP 118

Query: 121 QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGD 180
           + HFD+++P F HIAQYRAG+VPV+++RVPC ++GG+RFT+NGHSYFNLVL+TNV GAGD
Sbjct: 119 RPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGD 178

Query: 181 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           V +VSIKGSRTGWQPMSRNWGQNWQSN +L+GQSLSF+VT SDGRTVTS NVA  GW FG
Sbjct: 179 VRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFG 238

Query: 241 RTYSGAQF 248
           +T+ G QF
Sbjct: 239 QTFEGGQF 246

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Required for normal plant growth. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. indica (taxid: 39946)

>sp|O22874|EXPA8_ARATH Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/253 (70%), Positives = 207/253 (81%), Gaps = 5/253 (1%)

Query: 1   MYFAGFFSLGFLALVSSVHANG----GGGWINARATFYGGGDASGTMGGACGYGNLYSQG 56
           MY   +     ++++S +   G     GGW    ATFYGG DASGTMGGACGYGNLY QG
Sbjct: 1   MYTPSYLKYSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQG 60

Query: 57  YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGW 116
           YGTNTAALSTALFNNGL+CG+CYE+KC +DP+WCL  TI VTATNFCPPN  L N+ GGW
Sbjct: 61  YGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGW 120

Query: 117 CNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVG 176
           CNPP QHFDL++P F  IAQYRAG+VPV+++RVPC ++GGIRFTINGHSYFNLVLI+NVG
Sbjct: 121 CNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVG 180

Query: 177 GAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPA 235
           GAGDVHAVSIKGS+T  WQ MSRNWGQNWQSN+Y+N QSLSF+VTTSDGRT+ S +VAP+
Sbjct: 181 GAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPS 240

Query: 236 GWSFGRTYSGAQF 248
            W FG+TY G QF
Sbjct: 241 NWQFGQTYQGGQF 253

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q40636|EXPA2_ORYSJ Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2

 Score =  369 bits (947), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/225 (75%), Positives = 195/225 (86%)

Query: 24  GGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC 83
           G W +A ATFYGGGDASGTMGGACGYGNLYS GYGTNTAALST LFN+G +CGSCYE++C
Sbjct: 27  GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRC 86

Query: 84  VNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVP 143
            ND +WCLPG++ VTATN CPPN ALPN+ GGWCNPP+ HFD+++P F  I  YRAG+VP
Sbjct: 87  DNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVP 146

Query: 144 VAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQN 203
           V+Y+RVPC ++GGIRFTINGHSYFNLVL+TNV G GDV +VSIKGS TGWQPMSRNWGQN
Sbjct: 147 VSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQN 206

Query: 204 WQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 248
           WQSN+YL+GQSLSF+V  SDGRTVTS NV PAGW FG+T+ G QF
Sbjct: 207 WQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6ZGU9|EXPA5_ORYSJ Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1

 Score =  358 bits (918), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 170/231 (73%), Positives = 199/231 (86%), Gaps = 4/231 (1%)

Query: 22  GGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEI 81
           GGGGW +A ATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG+C+E+
Sbjct: 60  GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEV 119

Query: 82  KCV---NDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYR 138
           +C         CLPG+++VTATNFCPPNNALP++ GGWCNPP+ HFD+SQPVFQ IA ++
Sbjct: 120 RCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFK 179

Query: 139 AGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMS 197
           AG+VPV+Y+RV C ++GGIRFTINGHSYFNLVL+TNVGGAGDVHAV++K  R+  WQ +S
Sbjct: 180 AGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALS 239

Query: 198 RNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 248
           RNWGQNWQS   L+GQ+LSF VTT DGR+V S N  P GWSFG+T+SGAQF
Sbjct: 240 RNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQF 290

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q38866|EXPA2_ARATH Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2

 Score =  357 bits (917), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 169/245 (68%), Positives = 203/245 (82%), Gaps = 2/245 (0%)

Query: 6   FFSLGFLAL-VSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 64
           F SL  L   + S++++  GGW    ATFYGG DASGTMGGACGYGNL+SQGYG  TAAL
Sbjct: 11  FLSLCTLNFCLYSINSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAAL 70

Query: 65  STALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHF 124
           STALFN+G  CG+C+E++C +DP+WC+PG+I+V+ATNFCPPN AL N+ GGWCNPP +HF
Sbjct: 71  STALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHF 130

Query: 125 DLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAV 184
           DL++P F  IAQYRAG+VPVA++RVPC + GGIRFTING+ YF+LVLITNVGGAGD+ AV
Sbjct: 131 DLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAV 190

Query: 185 SIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 243
           S+KGS+T  WQ MSRNWGQNWQSNTYL GQSLSF+VT SDGRTV SY+V P  W FG+T+
Sbjct: 191 SLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTF 250

Query: 244 SGAQF 248
            G QF
Sbjct: 251 EGGQF 255

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
429326520	249	expansin protein [Populus tomentosa]	1.0	1.0	0.887	1e-128
255562904	249	Alpha-expansin 1 precursor, putative [Ri	0.979	0.979	0.905	1e-127
350528647	252	expansin 3 [Prunus salicina]	0.983	0.972	0.902	1e-127
224101377	251	hypothetical protein POPTRDRAFT_656451 [	1.0	0.992	0.883	1e-127
116247825	253	expansin 2 [Malus hupehensis]	0.987	0.972	0.894	1e-127
17484121	252	alpha-expansin [Prunus cerasus]	0.983	0.972	0.893	1e-126
29466641	252	expansin [Prunus persica]	0.983	0.972	0.893	1e-126
29467507	253	expansin [Pyrus communis]	0.987	0.972	0.886	1e-126
401823909	251	EXP4 protein [Rosa hybrid cultivar]	1.0	0.992	0.871	1e-126
77167275	251	expansin [Fragaria x ananassa]	1.0	0.992	0.859	1e-125

>gi|429326520|gb|AFZ78600.1| expansin protein [Populus tomentosa]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/249 (88%), Positives = 237/249 (95%)

Query: 1   MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60
           M  AGFF +G LA+VSSV+  GGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 1   MVLAGFFLVGLLAMVSSVNGYGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPP 120
           TAALSTALFN+GLSCGSCYEI+CVNDPKWCLPG+I+VTATNFCPPNNALPNNAGGWCNPP
Sbjct: 61  TAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSILVTATNFCPPNNALPNNAGGWCNPP 120

Query: 121 QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGD 180
           QQHFDLSQPVFQHIA+Y AG+VPV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGD
Sbjct: 121 QQHFDLSQPVFQHIARYSAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 180

Query: 181 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           VHAVS+KGSRTGWQPMSRNWGQNWQSN YLNGQSLSF+VTTSDGRTV SYN AP+ WSFG
Sbjct: 181 VHAVSVKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFG 240

Query: 241 RTYSGAQFR 249
           +T+SGAQFR
Sbjct: 241 QTFSGAQFR 249

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562904|ref|XP_002522457.1| Alpha-expansin 1 precursor, putative [Ricinus communis] gi|223538342|gb|EEF39949.1| Alpha-expansin 1 precursor, putative [Ricinus communis]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/244 (90%), Positives = 235/244 (96%)

Query: 6   FFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALS 65
           FF +GFLA+VSSV+  GGGGWINA ATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALS
Sbjct: 6   FFLVGFLAMVSSVNCYGGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALS 65

Query: 66  TALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFD 125
           TALFN+GLSCGSCYEI+CVNDPKWCLPG+I+VTATNFCPPNNALPNNAGGWCNPPQQHFD
Sbjct: 66  TALFNSGLSCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFD 125

Query: 126 LSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVS 185
           LSQPVFQHIAQYRAG+VPVAY+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVHAV+
Sbjct: 126 LSQPVFQHIAQYRAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVA 185

Query: 186 IKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSG 245
           IKGSRTGWQ MSRNWGQNWQSNTYLNGQSLSF+VTTSDGR+V SYNVAP  WSFG+T+SG
Sbjct: 186 IKGSRTGWQAMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRSVVSYNVAPVSWSFGQTFSG 245

Query: 246 AQFR 249
           AQFR
Sbjct: 246 AQFR 249

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350528647|gb|AEQ28765.1| expansin 3 [Prunus salicina]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/245 (90%), Positives = 232/245 (94%)

Query: 5   GFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 64
           GF  +G LA+VS  HA GGGGW+NARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL
Sbjct: 8   GFCLVGLLAMVSCAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 67

Query: 65  STALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHF 124
           STALFNNGL CGSCYEI+CVNDPKWCLPG I+VTATNFCPPNNALPNNAGGWCNPPQ HF
Sbjct: 68  STALFNNGLGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHHF 127

Query: 125 DLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAV 184
           DLSQPVFQHIAQYRAGVVPVAY+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+V
Sbjct: 128 DLSQPVFQHIAQYRAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSV 187

Query: 185 SIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 244
           S+KGSRTGWQ MSRNWGQNWQSN+YLNGQSLSF+VTTSDGRTV SYN APAGWSFG+TYS
Sbjct: 188 SVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGWSFGQTYS 247

Query: 245 GAQFR 249
           GAQFR
Sbjct: 248 GAQFR 252

Source: Prunus salicina

Species: Prunus salicina

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101377|ref|XP_002312253.1| hypothetical protein POPTRDRAFT_656451 [Populus trichocarpa] gi|222852073|gb|EEE89620.1| hypothetical protein POPTRDRAFT_656451 [Populus trichocarpa]

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/249 (88%), Positives = 235/249 (94%)

Query: 1   MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60
           M  AGF  +G LA+VSSV+  GGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 3   MALAGFILVGLLAMVSSVNGYGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 62

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPP 120
           TAALSTALFN+GLSCGSCYEI+CVNDPKWCLPG+I+VTATNFCPPNNALPNNAGGWCNPP
Sbjct: 63  TAALSTALFNSGLSCGSCYEIRCVNDPKWCLPGSILVTATNFCPPNNALPNNAGGWCNPP 122

Query: 121 QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGD 180
           Q HFDLSQPVFQHIA+Y AGVVPV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGD
Sbjct: 123 QHHFDLSQPVFQHIARYSAGVVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGD 182

Query: 181 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           VHAVS+KGSRTGWQPMSRNWGQNWQSN YLNGQSLSF+VTTSDGRTV SYN AP+ WSFG
Sbjct: 183 VHAVSVKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFG 242

Query: 241 RTYSGAQFR 249
           +T+SGAQFR
Sbjct: 243 QTFSGAQFR 251

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116247825|gb|ABJ90221.1| expansin 2 [Malus hupehensis]

 Score =  458 bits (1179), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/247 (89%), Positives = 234/247 (94%), Gaps = 1/247 (0%)

Query: 4   AGFFSLGFLA-LVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTA 62
           +GFF  G LA LV+S HA GGGGW+NARATFYGGGDASGTMGGACGYGNLYSQGYGTNTA
Sbjct: 7   SGFFMAGLLAMLVASAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTA 66

Query: 63  ALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQ 122
           ALSTALFNNGL CGSCYEI+CVNDPKWCLPGTI VTATNFCPPNNALPNNAGGWCNPPQ 
Sbjct: 67  ALSTALFNNGLGCGSCYEIRCVNDPKWCLPGTIAVTATNFCPPNNALPNNAGGWCNPPQH 126

Query: 123 HFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVH 182
           HFDLSQPVFQHIAQY+AGVVPV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH
Sbjct: 127 HFDLSQPVFQHIAQYKAGVVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVH 186

Query: 183 AVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRT 242
           +VS+KGSRTGWQ MSRNWGQNWQSN+YLNGQ+LSF+VTTSDGRTV SYN APAGWSFG+T
Sbjct: 187 SVSVKGSRTGWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSYNAAPAGWSFGQT 246

Query: 243 YSGAQFR 249
           YSGAQFR
Sbjct: 247 YSGAQFR 253

Source: Malus hupehensis

Species: Malus hupehensis

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17484121|gb|AAL40354.1|AF448467_1 alpha-expansin [Prunus cerasus]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/245 (89%), Positives = 232/245 (94%)

Query: 5   GFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 64
           GF  +G LA+VS  HA GGGGW+NARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL
Sbjct: 8   GFCLVGLLAMVSCAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 67

Query: 65  STALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHF 124
           STALFNNGL CGSCYEI+CVNDPKWCLPG I+VTATNFCPPNNALPNNAGGWCNPPQ HF
Sbjct: 68  STALFNNGLGCGSCYEIRCVNDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHHF 127

Query: 125 DLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAV 184
           DLSQPVFQHIAQY+AGVVPVAY+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+V
Sbjct: 128 DLSQPVFQHIAQYKAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSV 187

Query: 185 SIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 244
           S+KGSRTGWQ MSRNWGQNWQSN+YLNGQSLSF+VTTSDGRTV +YN APAGWSFG+TYS
Sbjct: 188 SVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVAYNAAPAGWSFGQTYS 247

Query: 245 GAQFR 249
           GAQFR
Sbjct: 248 GAQFR 252

Source: Prunus cerasus

Species: Prunus cerasus

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|29466641|dbj|BAC66786.1| expansin [Prunus persica]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/245 (89%), Positives = 232/245 (94%)

Query: 5   GFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 64
           GF  +G LA+VS  HA GGGGW+NARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL
Sbjct: 8   GFCLVGLLAMVSCAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 67

Query: 65  STALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHF 124
           STALFNNGL CGSCYEI+CV+DPKWCLPG I+VTATNFCPPNNALPNNAGGWCNPPQ HF
Sbjct: 68  STALFNNGLGCGSCYEIRCVSDPKWCLPGAIVVTATNFCPPNNALPNNAGGWCNPPQHHF 127

Query: 125 DLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAV 184
           DLSQPVFQHIAQY+AGVVPVAY+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+V
Sbjct: 128 DLSQPVFQHIAQYKAGVVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSV 187

Query: 185 SIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 244
           S+KGSRTGWQ MSRNWGQNWQSN+YLNGQSLSF+VTTSDGRTV SYN APAGWSFG+TYS
Sbjct: 188 SVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRTVVSYNAAPAGWSFGQTYS 247

Query: 245 GAQFR 249
           GAQFR
Sbjct: 248 GAQFR 252

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|29467507|dbj|BAC67192.1| expansin [Pyrus communis]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/247 (88%), Positives = 234/247 (94%), Gaps = 1/247 (0%)

Query: 4   AGFFSLGFLA-LVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTA 62
           +GFF  G LA LV+S HA GGGGW+NARATFYGGGDASGTMGGACGYGNLYSQGYGTNTA
Sbjct: 7   SGFFMAGLLAMLVASAHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTNTA 66

Query: 63  ALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQ 122
           ALSTALFNNGL CGSCYEI+CVNDPKWCLPG+I+VTATNFCPPNNALPNNAGGWCNPPQ 
Sbjct: 67  ALSTALFNNGLGCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQH 126

Query: 123 HFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVH 182
           HFDLSQPVFQHIAQY+AGVVPV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH
Sbjct: 127 HFDLSQPVFQHIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLITNVGGAGDVH 186

Query: 183 AVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRT 242
           +VS+KGSRTGWQ MSRNWGQNWQSN+YLNGQ+LSF+VTTSDGRTV SYN APAGWSFG+T
Sbjct: 187 SVSVKGSRTGWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSYNAAPAGWSFGQT 246

Query: 243 YSGAQFR 249
           YSGAQ R
Sbjct: 247 YSGAQLR 253

Source: Pyrus communis

Species: Pyrus communis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|401823909|gb|AFQ21787.1| EXP4 protein [Rosa hybrid cultivar]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/249 (87%), Positives = 234/249 (93%)

Query: 1   MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60
           M  A FF +G LA+V+  HA GGGGW+NARATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 3   MASAVFFLVGLLAMVTCEHAYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTN 62

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPP 120
           TAALSTALFNNGL CGSCYEI+CVNDPKWCLPG+I+VTATNFCPPNNALPNNAGGWCNPP
Sbjct: 63  TAALSTALFNNGLGCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPP 122

Query: 121 QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGD 180
           Q HFDLSQPVFQHIAQY+AGVVPV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGD
Sbjct: 123 QHHFDLSQPVFQHIAQYKAGVVPVSYRRVPCSRRGGIRFTINGHSYFNLVLITNVGGAGD 182

Query: 181 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           VH+VS+KGSRTGWQPMSRNWGQNWQSN+YLNGQ+LSF+VTTSDGRTV SYN  PA WSFG
Sbjct: 183 VHSVSVKGSRTGWQPMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSYNATPARWSFG 242

Query: 241 RTYSGAQFR 249
           +T+SGAQFR
Sbjct: 243 QTFSGAQFR 251

Source: Rosa hybrid cultivar

Species: Rosa hybrid cultivar

Genus: Rosa

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|77167275|gb|ABA62612.1| expansin [Fragaria x ananassa]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/249 (85%), Positives = 234/249 (93%)

Query: 1   MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTN 60
           M  A FF +G LA+V+S H  GGGGW+NARATFYGGGDASGTMGGACGYGNLYSQGYGTN
Sbjct: 3   MASAAFFLVGLLAMVTSAHGYGGGGWVNARATFYGGGDASGTMGGACGYGNLYSQGYGTN 62

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPP 120
           TAALSTALFNNGL CGSCYEI+CVNDPKWCLPG+I+VTATNFCPPNNALPNNAGGWCNPP
Sbjct: 63  TAALSTALFNNGLGCGSCYEIRCVNDPKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPP 122

Query: 121 QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGD 180
           Q HFDLSQPVFQHIAQY+AGVVPV+Y+RVPC RRGGIRFT+NGHSYFNLVLITNVGGAGD
Sbjct: 123 QHHFDLSQPVFQHIAQYKAGVVPVSYRRVPCRRRGGIRFTVNGHSYFNLVLITNVGGAGD 182

Query: 181 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           VH+VS+KGS+TGWQ MSRNWGQNWQSN+YLNGQ+LSF+VTTSDGRTV SYN APA WSFG
Sbjct: 183 VHSVSVKGSKTGWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSYNAAPARWSFG 242

Query: 241 RTYSGAQFR 249
           +T++GAQFR
Sbjct: 243 QTFTGAQFR 251

Source: Fragaria x ananassa

Species: Fragaria x ananassa

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
TAIR|locus:2200625	259	EXPA10 "expansin A10" [Arabido	0.911	0.876	0.753	3.2e-97
TAIR|locus:2007106	275	EXPA1 "expansin A1" [Arabidops	0.907	0.821	0.758	4.1e-97
TAIR|locus:2056670	253	EXPA15 "expansin A15" [Arabido	0.903	0.889	0.733	4.3e-93
TAIR|locus:2161028	255	EXPA14 "expansin A14" [Arabido	0.903	0.882	0.702	2.5e-88
TAIR|locus:2061918	253	EXPA8 "expansin A8" [Arabidops	0.903	0.889	0.690	1.1e-87
TAIR|locus:2180182	258	EXPA9 "expansin A9" [Arabidops	0.911	0.879	0.655	6.2e-85
TAIR|locus:2043240	257	EXPA4 "expansin A4" [Arabidops	0.911	0.883	0.650	4.4e-84
TAIR|locus:2087027	255	EXPA5 "expansin A5" [Arabidops	0.895	0.874	0.666	9.1e-84
TAIR|locus:2153569	255	EXPA2 "expansin A2" [Arabidops	0.923	0.901	0.627	1.3e-82
TAIR|locus:2099991	260	EXPA16 "expansin A16" [Arabido	0.911	0.873	0.637	2.2e-82

TAIR|locus:2200625 EXPA10 "expansin A10" [Arabidopsis thaliana (taxid:3702)]

 Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
 Identities = 171/227 (75%), Positives = 191/227 (84%)

Query:    23 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIK 82
             GGGWINA ATFY              YGNLYSQGYGT+TAALSTALFNNGLSCGSC+EI+
Sbjct:    33 GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIR 92

Query:    83 CVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVV 142
             C ND KWCLPG+I+VTATNFC          GGWCNPP +HFDL+QPVFQ IAQYRAG+V
Sbjct:    93 CENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIV 152

Query:   143 PVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQ 202
             PV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT WQ MSRNWGQ
Sbjct:   153 PVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQ 212

Query:   203 NWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 249
             NWQSN+YLNGQ+LSF+VTTSDGRTV S+N APAGWS+G+T++G QFR
Sbjct:   213 NWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 259

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS;IMP

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0005199 "structural constituent of cell wall" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=TAS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2007106 EXPA1 "expansin A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
 Identities = 173/228 (75%), Positives = 190/228 (83%)

Query:    19 HANG--GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCG 76
             H NG  GGGW+NA ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG
Sbjct:    18 HVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG 77

Query:    77 SCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ 136
             +C+EI+C ND KWCLPG+I+VTATNFC          GGWCNPPQQHFDLSQPVFQ IAQ
Sbjct:    78 ACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQ 137

Query:   137 YRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 196
             YRAG+VPVAY+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+  +KGSRTGWQ M
Sbjct:   138 YRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAM 197

Query:   197 SRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 244
             SRNWGQNWQSN+YLNGQSLSF+VTTSDG+T+ S NVA AGWSFG+T++
Sbjct:   198 SRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFT 245

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=TAS

GO:0010114 "response to red light" evidence=IEP

GO:0010119 "regulation of stomatal movement" evidence=IMP

TAIR|locus:2056670 EXPA15 "expansin A15" [Arabidopsis thaliana (taxid:3702)]

 Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
 Identities = 165/225 (73%), Positives = 183/225 (81%)

Query:    25 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCV 84
             GW+NA ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+EIKC 
Sbjct:    29 GWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQ 88

Query:    85 NDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPV 144
             +D  WCLPG I+VTATNFC          GGWCNPP  HFDLSQPVFQ IAQY+AGVVPV
Sbjct:    89 SDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPV 148

Query:   145 AYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNW 204
             +Y+RVPC RRGGIRFTINGHSYFNLVL+TNVGGAGDVH+V++KGSRT WQ MSRNWGQNW
Sbjct:   149 SYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNW 208

Query:   205 QSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 249
             QSN  LNGQ+LSF+VT SDGRTV S N+APA WSFG+T++G QFR
Sbjct:   209 QSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2161028 EXPA14 "expansin A14" [Arabidopsis thaliana (taxid:3702)]

 Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
 Identities = 158/225 (70%), Positives = 176/225 (78%)

Query:    25 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCV 84
             GW+NARATFY              YGNLYSQGYGTNTAALSTALFN G SCG+C++IKCV
Sbjct:    28 GWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCV 87

Query:    85 NDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPV 144
             +DPKWC+ GTI VT TNFC          GGWCNPPQ HFDL+QP+F  IAQY+AGVVPV
Sbjct:    88 DDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPV 147

Query:   145 AYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNW 204
              Y+RV C R+GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRNWGQNW
Sbjct:   148 QYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNW 207

Query:   205 QSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 249
             QSN  L+GQ+LSF+VTTSDGRTV S N  P  WSFG+TY+G QFR
Sbjct:   208 QSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

TAIR|locus:2061918 EXPA8 "expansin A8" [Arabidopsis thaliana (taxid:3702)]

 Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
 Identities = 156/226 (69%), Positives = 178/226 (78%)

Query:    24 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC 83
             GGW    ATFY              YGNLY QGYGTNTAALSTALFNNGL+CG+CYE+KC
Sbjct:    28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKC 87

Query:    84 VNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVP 143
              +DP+WCL  TI VTATNFC          GGWCNPP QHFDL++P F  IAQYRAG+VP
Sbjct:    88 NDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVP 147

Query:   144 VAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQ 202
             V+++RVPC ++GGIRFTINGHSYFNLVLI+NVGGAGDVHAVSIKGS+T  WQ MSRNWGQ
Sbjct:   148 VSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQ 207

Query:   203 NWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 248
             NWQSN+Y+N QSLSF+VTTSDGRT+ S +VAP+ W FG+TY G QF
Sbjct:   208 NWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2180182 EXPA9 "expansin A9" [Arabidopsis thaliana (taxid:3702)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 150/229 (65%), Positives = 175/229 (76%)

Query:    23 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIK 82
             GG WINA ATFY              YGNLYSQGYG NTAALSTALFNNGLSCGSC+E+K
Sbjct:    29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELK 88

Query:    83 CVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAG 140
             C+NDP WCLPG  +I++TATNFC          GGWCNPP++HFDL+ P+F  IA+Y+AG
Sbjct:    89 CINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAG 148

Query:   141 VVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNW 200
             +VPV+Y+R+PC ++GGIRFTING  YFNLVL+TNV GAGDV  VS+KGS T W  +SRNW
Sbjct:   149 IVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNW 208

Query:   201 GQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 249
             GQNWQSN  L GQSLSF V TSDGR+ TS N+AP+ W FG+TYSG  FR
Sbjct:   209 GQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFR 257

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

GO:0046685 "response to arsenic-containing substance" evidence=RCA

TAIR|locus:2043240 EXPA4 "expansin A4" [Arabidopsis thaliana (taxid:3702)]

 Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
 Identities = 149/229 (65%), Positives = 173/229 (75%)

Query:    23 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIK 82
             GG W NA ATFY              YGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+K
Sbjct:    28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELK 87

Query:    83 CVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAG 140
             C NDP+WC  G+  I++TATNFC          GGWCNPP++HFDL+ PVF  IAQYRAG
Sbjct:    88 CANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAG 147

Query:   141 VVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNW 200
             +VPV+Y+RVPC +RGGIRFTINGH YFNLVLITNV GAGD+   S+KGSRTGW  +SRNW
Sbjct:   148 IVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNW 207

Query:   201 GQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 249
             GQNWQSN  L GQ+LSF VT SD RT TS+N+ P+ W FG+T+ G  FR
Sbjct:   208 GQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFR 256

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2087027 EXPA5 "expansin A5" [Arabidopsis thaliana (taxid:3702)]

 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 156/234 (66%), Positives = 181/234 (77%)

Query:    19 HANGG--GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCG 76
             H  GG  G WINA ATFY              YGNLYSQGYG  TAALSTALF+ GLSCG
Sbjct:    29 HHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCG 88

Query:    77 SCYEIKCVNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA 135
             +C+E+ CVNDP+WC+ G +I+VTATNFC          GG C+PP  HFDLSQP+++ IA
Sbjct:    89 ACFELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIA 140

Query:   136 QYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQP 195
              Y++G++PV Y+RV C R GGIRFTINGHSYFNLVL+TNVGGAGDVH+VS+KGSRT WQ 
Sbjct:   141 LYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQL 200

Query:   196 MSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 249
             MSRNWGQNWQSN+YLNGQSLSF VTTSD R+V S+NVAP  WSFG+TY+G QFR
Sbjct:   201 MSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFR 254

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

TAIR|locus:2153569 EXPA2 "expansin A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 145/231 (62%), Positives = 176/231 (76%)

Query:    19 HANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSC 78
             +++  GGW    ATFY              YGNL+SQGYG  TAALSTALFN+G  CG+C
Sbjct:    25 NSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGAC 84

Query:    79 YEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYR 138
             +E++C +DP+WC+PG+I+V+ATNFC          GGWCNPP +HFDL++P F  IAQYR
Sbjct:    85 FELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYR 144

Query:   139 AGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMS 197
             AG+VPVA++RVPC + GGIRFTING+ YF+LVLITNVGGAGD+ AVS+KGS+T  WQ MS
Sbjct:   145 AGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMS 204

Query:   198 RNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 248
             RNWGQNWQSNTYL GQSLSF+VT SDGRTV SY+V P  W FG+T+ G QF
Sbjct:   205 RNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=TAS

TAIR|locus:2099991 EXPA16 "expansin A16" [Arabidopsis thaliana (taxid:3702)]

 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 146/229 (63%), Positives = 171/229 (74%)

Query:    23 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIK 82
             GG W  A ATFY              YGNLYSQGYGTNTAALST+LFN+G SCG+C+EIK
Sbjct:    31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIK 90

Query:    83 CVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAG 140
             CVNDPKWC PG  ++ VTATNFC          GGWCNPP+ HFDL+ PVF  IA+YRAG
Sbjct:    91 CVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAG 150

Query:   141 VVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNW 200
             +VP++Y+RV C + GGIRFTINGH YFNLVLITNV GAGD+   S+KGS+TGW  ++RNW
Sbjct:   151 IVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNW 210

Query:   201 GQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 249
             GQNWQSN  L GQSLSF VT+SD RT TS+N+AP+ W FG+T+ G  FR
Sbjct:   211 GQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFR 259

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O80622	EXP15_ARATH	No assigned EC number	0.7871	0.9959	0.9802	no	no
Q38864	EXPA5_ARATH	No assigned EC number	0.7466	0.8674	0.8470	no	no
Q9M2S9	EXP16_ARATH	No assigned EC number	0.7161	0.9116	0.8730	no	no
O48818	EXPA4_ARATH	No assigned EC number	0.7292	0.9116	0.8832	no	no
Q9LZ99	EXPA9_ARATH	No assigned EC number	0.7205	0.9116	0.8798	no	no
A2Y5R6	EXPA4_ORYSI	No assigned EC number	0.7338	0.9879	1.0	N/A	no
O22874	EXPA8_ARATH	No assigned EC number	0.7035	0.9959	0.9802	no	no
Q9C554	EXPA1_ARATH	No assigned EC number	0.816	1.0	0.996	yes	no
Q40636	EXPA2_ORYSJ	No assigned EC number	0.7555	0.9036	0.8964	no	no
O80932	EXPA3_ARATH	No assigned EC number	0.7205	0.9116	0.8664	no	no
Q9FMA0	EXP14_ARATH	No assigned EC number	0.7301	1.0	0.9764	no	no
Q0DHB7	EXPA4_ORYSJ	No assigned EC number	0.7338	0.9879	1.0	yes	no
Q9LDR9	EXP10_ARATH	No assigned EC number	0.7911	1.0	1.0	no	no
Q852A1	EXPA7_ORYSJ	No assigned EC number	0.7136	0.9236	0.8712	no	no
Q4PNY1	EXP11_ORYSJ	No assigned EC number	0.7339	0.8714	0.875	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	249
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	1e-137
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	1e-120
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	6e-53
pfam01357	82	pfam01357, Pollen_allerg_1, Pollen allergen	2e-38
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	5e-26
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	6e-22
PLN03024	125	PLN03024, PLN03024, Putative EG45-like domain cont	3e-04

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score =  386 bits (993), Expect = e-137
 Identities = 186/226 (82%), Positives = 205/226 (90%)

Query: 23  GGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIK 82
           G GW  A ATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG+C+EIK
Sbjct: 22  GSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIK 81

Query: 83  CVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVV 142
           CVND  WCLPG+I++TATNFCPPN ALPNN GGWCNPPQQHFDLSQPVFQ IAQY+AG+V
Sbjct: 82  CVNDNIWCLPGSIIITATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYKAGIV 141

Query: 143 PVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQ 202
           PV Y+RV C + GGIRFTINGHSYFNLVLITNVGGAGD+ AVSIKGS++ WQ MSRNWGQ
Sbjct: 142 PVQYRRVACRKSGGIRFTINGHSYFNLVLITNVGGAGDIVAVSIKGSKSNWQAMSRNWGQ 201

Query: 203 NWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 248
           NWQSN+YLNGQ+LSF+VTTSDGRTV S N AP+ W+FG+TY+G QF
Sbjct: 202 NWQSNSYLNGQALSFKVTTSDGRTVISNNAAPSNWAFGQTYTGMQF 247

Length = 247

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score =  343 bits (882), Expect = e-120
 Identities = 156/238 (65%), Positives = 183/238 (76%), Gaps = 3/238 (1%)

Query: 13  ALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG 72
            L  +V+A    GW  A ATFYGG DASGTMGGACGYGNLYS GYGT TAALSTALFN+G
Sbjct: 17  YLFINVNAFTPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDG 76

Query: 73  LSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQP 129
            SCG CY I C    D +WC+ G  + +TATNFCPPN ALPNN GGWCNPP QHFD++QP
Sbjct: 77  ASCGQCYRIMCDYQADSRWCIKGASVTITATNFCPPNYALPNNNGGWCNPPLQHFDMAQP 136

Query: 130 VFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS 189
            ++ I  YR G+VPV ++RVPC + GG+RFTING  YF LVLI+NVGGAG + +VSIKGS
Sbjct: 137 AWEKIGIYRGGIVPVLFQRVPCKKHGGVRFTINGRDYFELVLISNVGGAGSIQSVSIKGS 196

Query: 190 RTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 247
           +TGW  MSRNWG NWQSN YL+GQSLSF+VTT+DG+T    NV PA W FG+T+S + 
Sbjct: 197 KTGWMAMSRNWGANWQSNAYLDGQSLSFKVTTTDGQTRFFLNVVPANWGFGQTFSSSV 254

Length = 256

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score =  165 bits (420), Expect = 6e-53
 Identities = 66/87 (75%), Positives = 74/87 (85%), Gaps = 1/87 (1%)

Query: 61  TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNFCPPNNALPNNAGGWCNP 119
           TAALSTALFNNG SCG+CYEI CV+ PKWC PG  I VTATNFCPPN AL N+ GGWCNP
Sbjct: 1   TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNP 60

Query: 120 PQQHFDLSQPVFQHIAQYRAGVVPVAY 146
           P++HFDLSQP F+ IAQY+AG+VPV Y
Sbjct: 61  PRKHFDLSQPAFEKIAQYKAGIVPVKY 87

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

>gnl|CDD|216453 pfam01357, Pollen_allerg_1, Pollen allergen

 Score =  128 bits (324), Expect = 2e-38
 Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 4/82 (4%)

Query: 157 IRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQ 213
           +RFT+NG S  YF  VL+ NVGG GD+ AV IK + +G W PMSRNWG NWQS++ L G 
Sbjct: 1   VRFTVNGGSNPYFLAVLVENVGGDGDIVAVEIKEAGSGEWIPMSRNWGANWQSDSVLLGG 60

Query: 214 SLSFEVTTSD-GRTVTSYNVAP 234
            LSF VT+SD G+T+ + NV P
Sbjct: 61  PLSFRVTSSDSGKTLVADNVIP 82

This family contains allergens lol PI, PII and PIII from Lolium perenne. Length = 82

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 96.5 bits (241), Expect = 5e-26
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 17/90 (18%)

Query: 61  TAALSTALFNNGLSCGSCYEIKC---VNDPKWCLPG-TIMVTATNFCPPNNALPNNAGGW 116
           TAA S +L+N+G +CG CY++KC    +    C    ++ VT T+ CP            
Sbjct: 1   TAAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVLRSVTVTITDRCPF----------- 49

Query: 117 CNPPQQHFDLSQPVFQHIAQYRAGVVPVAY 146
             PP++HFDLS P F+ +A+ RAG+VPV Y
Sbjct: 50  --PPRRHFDLSGPAFEALAKPRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score = 90.6 bits (225), Expect = 6e-22
 Identities = 70/235 (29%), Positives = 107/235 (45%), Gaps = 30/235 (12%)

Query: 26  WINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN 85
           +  +RAT+YG  D  GT  GACG+G       G N A +S  L+ NG  CG+CY+++C  
Sbjct: 25  FTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVSR-LYRNGTGCGACYQVRC-K 82

Query: 86  DPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ-------YR 138
            P  C    + V  T++            G     +  F LS   +  +A+       + 
Sbjct: 83  APNLCSDDGVNVVVTDY----------GEG----DKTDFILSPRAYARLARPNMAAELFA 128

Query: 139 AGVVPVAYKRVPCGRRG-GIRFTINGHSYFN---LVLITNVGGAGDVHAVSI-KGSRTGW 193
            GVV V Y+R+PC   G  + F ++ HS F     +++    G  D+ AV I +     W
Sbjct: 129 YGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAIVMLYQAGQNDILAVEIWQEDCKEW 188

Query: 194 QPMSRNWGQNWQ-SNTYLNGQSLSFEVTTSDGRT-VTSYNVAPAGWSFGRTYSGA 246
           + M + +G  W   N      +L F+V+ S G+T V + NV P+ W  G  Y   
Sbjct: 189 RGMRKAYGAVWDMPNPPKGPITLRFQVSGSAGQTWVQAKNVIPSDWKAGVAYDSN 243

Length = 247

>gnl|CDD|178595 PLN03024, PLN03024, Putative EG45-like domain containing protein 1; Provisional

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 39/145 (26%), Positives = 53/145 (36%), Gaps = 32/145 (22%)

Query: 6   FFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALS 65
            FS   + L S  +A  G       ATFY     S    G           +G   AA S
Sbjct: 7   IFSTVLVFLFSVSYATPG------IATFYTSYTPSACYRG---------TSFGVMIAAAS 51

Query: 66  TALFNNGLSCGSCYEIKCVND----PKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQ 121
            +L+NNG  CG  + +KC       P  C   ++ V   + CP   A             
Sbjct: 52  DSLWNNGRVCGKMFTVKCKGPRNAVPHPCTGKSVTVKIVDHCPSGCA------------- 98

Query: 122 QHFDLSQPVFQHIAQYRAGVVPVAY 146
              DLS+  F  IA   AG++ + Y
Sbjct: 99  STLDLSREAFAQIANPVAGIINIDY 123

Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	249
PLN00050	247	expansin A; Provisional	100.0
PLN00193	256	expansin-A; Provisional	100.0
PLN03023	247	Expansin-like B1; Provisional	100.0
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.96
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.95
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.94
PLN00115	118	pollen allergen group 3; Provisional	99.9
PF01357	82	Pollen_allerg_1: Pollen allergen; InterPro: IPR007	99.87
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.77
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	99.08
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.0
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	97.83
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	97.74
PRK10672	361	rare lipoprotein A; Provisional	97.07
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	88.16

>PLN00050 expansin A; Provisional

Probab=100.00  E-value=2.7e-70  Score=483.36  Aligned_cols=247  Identities=77%  Similarity=1.375  Sum_probs=229.3

Q ss_pred             CchhhHHHHHHHHhhhccccCCCCCceEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEE
Q 025740            1 MYFAGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYE   80 (249)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~e   80 (249)
                      |--||.-+..+|..++-++ .+..+|..++|||||++++.++++|||||+++..++++.++||+|+++|++|++||+|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~-~~~~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCye   79 (247)
T PLN00050          1 MECLGYTIVALLSILKIVE-GYGSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFE   79 (247)
T ss_pred             CcchhhhHHHHhhhheecc-ccCCCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEE
Confidence            5567777777777776655 456789999999999999888999999999988888999999999999999999999999


Q ss_pred             EEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEEeecCCCCceeEE
Q 025740           81 IKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFT  160 (249)
Q Consensus        81 V~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C~~~gni~~~  160 (249)
                      |+|.+.+..|.+++|+|+|||+||++++.|++|++||++++.|||||..||.+||....|+++|+||||||+++|||+|+
T Consensus        80 V~C~~~~~~C~~gsV~V~itd~CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~~~aGii~V~yRRVpC~~~G~i~f~  159 (247)
T PLN00050         80 IKCVNDNIWCLPGSIIITATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYKAGIVPVQYRRVACRKSGGIRFT  159 (247)
T ss_pred             EEcCCCCcccCCCcEEEEEecCCCCCcCcCccCCCcCCCCCcccccCHHHHHHHhhhcCCeeeeEEEEecCcCCCCeEEE
Confidence            99977656799899999999999999999999999999889999999999999999999999999999999999999999


Q ss_pred             EcCCccceeEEEEeeCCCcceEEEEEEecCCceeeccCCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCCCCC
Q 025740          161 INGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFG  240 (249)
Q Consensus       161 v~s~~~w~av~v~n~~G~~~I~sVei~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~~vip~~w~~G  240 (249)
                      |++++||++|+|.|++|+++|++|+|+++++.|++|+|+||++|+++.++.+.||+||||+.+|+++++.||||++|++|
T Consensus       160 v~g~sy~~~vlv~nv~G~gdi~~V~ikg~~~~W~~M~R~wGa~W~~~~~l~g~~lsfRvt~~~G~~~~~~~V~Pa~W~~G  239 (247)
T PLN00050        160 INGHSYFNLVLITNVGGAGDIVAVSIKGSKSNWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVISNNAAPSNWAFG  239 (247)
T ss_pred             EcCCceeEEEEEEEcCCCccEEEEEEecCCCCeeECccccCceeEccCCCCCCcEEEEEEecCCcEEEECceeCCCCCCC
Confidence            99988999999999999999999999998778999999999999998877767999999999999999999999999999


Q ss_pred             eEEeCCCC
Q 025740          241 RTYSGAQF  248 (249)
Q Consensus       241 ~~Y~~~q~  248 (249)
                      .+|++.||
T Consensus       240 ~ty~~~~f  247 (247)
T PLN00050        240 QTYTGMQF  247 (247)
T ss_pred             CeEecCcC
Confidence            99999887

>PLN00193 expansin-A; Provisional

Probab=100.00  E-value=6.8e-70  Score=482.67  Aligned_cols=242  Identities=65%  Similarity=1.230  Sum_probs=223.6

Q ss_pred             HHHHHHHhhhccccCC-CCCceEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcC
Q 025740            7 FSLGFLALVSSVHANG-GGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN   85 (249)
Q Consensus         7 ~~~~~~~~~~~~~~~~-~~~~~~g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~   85 (249)
                      +||-|||.+.-+.+.+ .++|.+++||||+++++.++.+|||||+++..++++.++||+|+++|++|++||+||||+|..
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~   89 (256)
T PLN00193         10 ILLQFCCYLFINVNAFTPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDY   89 (256)
T ss_pred             HHHHHHHHHHhhccCcCCCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECCC
Confidence            3455667666655554 469999999999999888889999999998888899999999999999999999999999952


Q ss_pred             --CCCCcCCC-eEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEEeecCCCCceeEEEc
Q 025740           86 --DPKWCLPG-TIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTIN  162 (249)
Q Consensus        86 --~~~~C~~~-sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C~~~gni~~~v~  162 (249)
                        ++..|.++ +|+|+|||+||.++++|++|++||.+++.|||||..||.+||....|+++|+||||+|+++|||+|+|+
T Consensus        90 ~~~~~~C~~g~sV~Vt~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~~~~Giv~V~yrRVpC~~~G~i~f~v~  169 (256)
T PLN00193         90 QADSRWCIKGASVTITATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFTIN  169 (256)
T ss_pred             CCCCccccCCCeEEEEEecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhhhcCCeEeEEEEEeccccCCCcEEEEc
Confidence              35689877 999999999999999999999999988999999999999999999999999999999999999999999


Q ss_pred             CCccceeEEEEeeCCCcceEEEEEEecCCceeeccCCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCCCCCeE
Q 025740          163 GHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRT  242 (249)
Q Consensus       163 s~~~w~av~v~n~~G~~~I~sVei~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~~vip~~w~~G~~  242 (249)
                      +++||++|+|.|++|++||++|+|+++++.|++|+|+||++|+++.++.+.||+||||+.+|+++++.||||++|++|.+
T Consensus       170 gn~y~~~vlv~nv~G~gdV~~v~Ik~~~~~W~~M~R~wGa~W~~~~~l~g~plsfRvts~~G~~~~~~~viPa~W~~G~t  249 (256)
T PLN00193        170 GRDYFELVLISNVGGAGSIQSVSIKGSKTGWMAMSRNWGANWQSNAYLDGQSLSFKVTTTDGQTRFFLNVVPANWGFGQT  249 (256)
T ss_pred             CCccEEEEEEEEeCCCccEEEEEEecCCCCeeECcccccceeEecCCCCCCCEEEEEEEcCCeEEEECceeCCCCCCCCe
Confidence            99999999999999999999999999877899999999999999887776799999999999999999999999999999


Q ss_pred             EeCC-CC
Q 025740          243 YSGA-QF  248 (249)
Q Consensus       243 Y~~~-q~  248 (249)
                      |++. ||
T Consensus       250 y~s~vqf  256 (256)
T PLN00193        250 FSSSVQF  256 (256)
T ss_pred             EecCccC
Confidence            9999 98

>PLN03023 Expansin-like B1; Provisional

Probab=100.00  E-value=1.3e-62  Score=434.09  Aligned_cols=213  Identities=30%  Similarity=0.629  Sum_probs=192.3

Q ss_pred             cCCCCCceEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEE
Q 025740           20 ANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTA   99 (249)
Q Consensus        20 ~~~~~~~~~g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V   99 (249)
                      +++.++|.+++|||||++++.|+.+|||||+++..+.++.++||++ ++|++|++||+||||+|.+ +..|.+++|+|+|
T Consensus        19 ~~~~~~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~~-~~~C~~~~v~V~i   96 (247)
T PLN03023         19 LCKSQDFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCKA-PNLCSDDGVNVVV   96 (247)
T ss_pred             hhhcCCcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeeh-hhhcCCchhcccEEeecCC-CCccCCCCeEEEE
Confidence            4566789999999999999999999999999988878888999998 9999999999999999976 5689999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh-------hcCCeeeEEEEEeecCCCC-ceeEEEc--CC-ccce
Q 025740          100 TNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG-GIRFTIN--GH-SYFN  168 (249)
Q Consensus       100 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~-------~~~G~~~i~w~~V~C~~~g-ni~~~v~--s~-~~w~  168 (249)
                      ||.||.           +   +.|||||.+||.+||.       ...|+++|+||||||.++| ||+|+|+  ++ ++|+
T Consensus        97 Td~~~~-----------~---~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRVpC~~~G~~i~F~V~~~s~~p~yl  162 (247)
T PLN03023         97 TDYGEG-----------D---KTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYL  162 (247)
T ss_pred             EeCCCC-----------C---CCccccCHHHHHHHhCccccchhccCcEEEeEEEEEecccCCCceEEEEecCCCCCceE
Confidence            999985           3   6899999999999998       4669999999999999999 9999998  33 7899


Q ss_pred             eEEEEeeCCCcceEEEEEEecC-CceeeccCCCCceEEeCCCCCCcceEEEEE--ecCCcE-EEEccccCCCCCCCeEEe
Q 025740          169 LVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFEVT--TSDGRT-VTSYNVAPAGWSFGRTYS  244 (249)
Q Consensus       169 av~v~n~~G~~~I~sVei~~~g-~~W~~m~r~~g~~W~~~~~~~g~p~~vRvT--~~~G~~-v~~~~vip~~w~~G~~Y~  244 (249)
                      +|+|.|++|+++|++|||++++ ..|++|+|+||++|+++.+|+| ||+||++  ..+|++ |+++||||++|++|.+|+
T Consensus       163 ~vlv~~vgG~GdI~~V~Ik~~~~~~W~~M~rnwGa~W~~~~~l~G-p~slrf~v~~~~g~~~vva~nViPa~Wk~G~TY~  241 (247)
T PLN03023        163 AIVMLYQAGQNDILAVEIWQEDCKEWRGMRKAYGAVWDMPNPPKG-PITLRFQVSGSAGQTWVQAKNVIPSDWKAGVAYD  241 (247)
T ss_pred             EEEEEEcCCCccEEEEEEEecCCCCceECccCCcceeEcCCCCCC-ceeEEEEEEeCCCcEEEEECceeCCCCCCCCEEe
Confidence            9999999999999999999965 6899999999999999988987 6666664  457755 899999999999999999


Q ss_pred             CC-CCC
Q 025740          245 GA-QFR  249 (249)
Q Consensus       245 ~~-q~~  249 (249)
                      ++ ||.
T Consensus       242 s~vq~~  247 (247)
T PLN03023        242 SNIQLD  247 (247)
T ss_pred             cccccC
Confidence            99 983

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.7e-28  Score=204.38  Aligned_cols=214  Identities=21%  Similarity=0.332  Sum_probs=167.1

Q ss_pred             hhHHHHHHHHhhhccccCCCCCceEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCC----CCCcceE
Q 025740            4 AGFFSLGFLALVSSVHANGGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG----LSCGSCY   79 (249)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~   79 (249)
                      ++-.++-..|....+.+++ .+.++|.|||-+...    ++||=-+.   +.+-+..|.|+|+++-+-|    +.-|+.+
T Consensus         9 ~g~v~~~~~~~s~q~s~aw-d~~f~G~ATyTgsGY----sGGAflLD---PI~sd~eITAlNPaqlNlGGipAAmAGaYL   80 (232)
T COG4305           9 VGMVLLTIFCFSPQASAAW-DDLFEGYATYTGSGY----SGGAFLLD---PIPSDMEITALNPAQLNLGGIPAAMAGAYL   80 (232)
T ss_pred             HHHhhhhhhccCCCccccc-ccccceeEEEecccc----cCceEEec---CcCCcceeeecCHHHcccCCchhhhccceE
Confidence            3444444444444443333 344689999877543    47887543   3445677999999888744    7899999


Q ss_pred             EEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEEeecCCCCceeE
Q 025740           80 EIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRF  159 (249)
Q Consensus        80 eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C~~~gni~~  159 (249)
                      +|.+   |+    ++++|.|||+.|++             ..+.||||+.||.+|++..+|+++|+||.|+-+..||+.+
T Consensus        81 rVqG---PK----G~TTVYVTDlYPeg-------------asGaLDLSpNAFakIGnm~qGrIpvqWrvv~aPvtGN~~Y  140 (232)
T COG4305          81 RVQG---PK----GKTTVYVTDLYPEG-------------ASGALDLSPNAFAKIGNMKQGRIPVQWRVVKAPVTGNFTY  140 (232)
T ss_pred             EEEC---CC----CceEEEEecccccc-------------cccccccChHHHhhhcchhcCccceeEEEecccccccEEE
Confidence            9998   54    68899999999983             2588999999999999999999999999999999999999


Q ss_pred             EEc--CCccceeEEEEeeCCCcceEEEEEEecCCceeeccCCCCceEEeCCCCCCcceEEEEEecCCcEEEEc-cccCCC
Q 025740          160 TIN--GHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSY-NVAPAG  236 (249)
Q Consensus       160 ~v~--s~~~w~av~v~n~~G~~~I~sVei~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~-~vip~~  236 (249)
                      ++|  |+.||.+|||+||.  .||.++|+.+. +.|..|.+.+||+|.-.+ +...||.+|+||+.|++++.. -.+|..
T Consensus       141 RiKeGSs~WWAAIQVRnH~--yPV~KlE~~qd-g~WinlpK~dYNhFVgT~-LG~~pL~~RmTDIRG~~l~DtlP~Lpk~  216 (232)
T COG4305         141 RIKEGSSRWWAAIQVRNHK--YPVMKLEYEQD-GKWINLPKMDYNHFVGTN-LGTGPLKVRMTDIRGKVLKDTLPKLPKS  216 (232)
T ss_pred             EEecCCccceeeeeeeccc--CceEEEEEecC-CeEeeccccccceeeccc-cCCCceEEEEeecccceeeccccccccc
Confidence            999  57899999999998  89999999977 789999999999998655 333599999999999999875 356644


Q ss_pred             CCCCe-EEeCC-CCC
Q 025740          237 WSFGR-TYSGA-QFR  249 (249)
Q Consensus       237 w~~G~-~Y~~~-q~~  249 (249)
                      -+-.+ +-.+. ||+
T Consensus       217 asSKaY~V~G~VQFs  231 (232)
T COG4305         217 ASSKAYTVPGHVQFS  231 (232)
T ss_pred             ccCCceeecceeecC
Confidence            33222 22344 775

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.95  E-value=1.8e-27  Score=191.31  Aligned_cols=99  Identities=34%  Similarity=0.678  Sum_probs=85.2

Q ss_pred             EEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcCC----CCCcCCCeEEEEEeCCC
Q 025740           28 NARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND----PKWCLPGTIMVTATNFC  103 (249)
Q Consensus        28 ~g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~----~~~C~~~sv~v~V~D~C  103 (249)
                      +|+||||++.+     .||| |++   .+++.++||+++++|++|+.||+||||+|.+.    +..|.+++|+|+|+|+|
T Consensus        23 ~G~AT~Y~~~~-----~gAC-~~~---~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~c~gksV~V~VtD~C   93 (125)
T PLN03024         23 PGIATFYTSYT-----PSAC-YRG---TSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCTGKSVTVKIVDHC   93 (125)
T ss_pred             ceEEEEeCCCC-----Cccc-cCC---CCCCCEeEEeCHHHcCCCcccCceEEEEECCCCccccccccCCeEEEEEEcCC
Confidence            69999998754     4899 443   24678999999999999999999999999653    24688889999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEE
Q 025740          104 PPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR  148 (249)
Q Consensus       104 p~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~  148 (249)
                      |+.          |.   .|||||++||++||+++.|+++|+|.+
T Consensus        94 P~~----------C~---~~~DLS~~AF~~iA~~~aG~v~V~y~~  125 (125)
T PLN03024         94 PSG----------CA---STLDLSREAFAQIANPVAGIINIDYIP  125 (125)
T ss_pred             CCC----------CC---CceEcCHHHHHHhcCccCCEEEEEEeC
Confidence            951          74   699999999999999999999999974

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.94  E-value=9.7e-27  Score=176.29  Aligned_cols=86  Identities=77%  Similarity=1.477  Sum_probs=80.1

Q ss_pred             EEEeChhhcCCCCCCcceEEEEEcCCCCCcCCC-eEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhhcC
Q 025740           61 TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG-TIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRA  139 (249)
Q Consensus        61 ~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~-sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~  139 (249)
                      +||+|+++|++|++||+||||+|.+++..|.++ +|+|+|||+||++++.++++++||.++++|||||++||.+||....
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~~~~   80 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQYKA   80 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhhhcC
Confidence            479999999999999999999997656689875 9999999999999888888999999889999999999999999999


Q ss_pred             CeeeEEE
Q 025740          140 GVVPVAY  146 (249)
Q Consensus       140 G~~~i~w  146 (249)
                      |+|+|+|
T Consensus        81 Gvi~v~y   87 (87)
T smart00837       81 GIVPVKY   87 (87)
T ss_pred             CEEeeEC
Confidence            9999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PLN00115 pollen allergen group 3; Provisional

Probab=99.90  E-value=3.1e-23  Score=164.89  Aligned_cols=91  Identities=20%  Similarity=0.370  Sum_probs=80.3

Q ss_pred             ecCCCCceeEEEc--CCccceeEEEEeeCCCcceEEEEEEecC-Ccee-eccCCCCceEEeCC--CCCCcceEEEEEecC
Q 025740          150 PCGRRGGIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQ-PMSRNWGQNWQSNT--YLNGQSLSFEVTTSD  223 (249)
Q Consensus       150 ~C~~~gni~~~v~--s~~~w~av~v~n~~G~~~I~sVei~~~g-~~W~-~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~  223 (249)
                      .|..  +|+|+|+  ++++||++++ |    ++|.+|||++++ ..|+ +|+|+||+.|+++.  +|+| ||+||+|+.+
T Consensus        21 ~~g~--~v~F~V~~gSnp~yL~ll~-~----~dI~~V~Ik~~g~~~W~~~M~rswGavW~~~s~~pl~G-PlS~R~t~~~   92 (118)
T PLN00115         21 SCAT--EVTFKVGKGSSSTSLELVT-N----VAISEVEIKEKGAKDWVDDLKESSTNTWTLKSKAPLKG-PFSVRFLVKG   92 (118)
T ss_pred             hcCC--ceEEEECCCCCcceEEEEE-e----CCEEEEEEeecCCCcccCccccCccceeEecCCCCCCC-ceEEEEEEeC
Confidence            3643  7999998  4699997765 3    469999999986 5899 99999999999754  6887 9999999999


Q ss_pred             CcEEEEccccCCCCCCCeEEeCC-CC
Q 025740          224 GRTVTSYNVAPAGWSFGRTYSGA-QF  248 (249)
Q Consensus       224 G~~v~~~~vip~~w~~G~~Y~~~-q~  248 (249)
                      |++++++||||++|+||.+|+++ ||
T Consensus        93 G~~~va~nViPa~Wk~G~tY~s~vq~  118 (118)
T PLN00115         93 GGYRVVDDVIPESFKAGSVYKTGIQV  118 (118)
T ss_pred             CCEEEECceECCCCCCCCEEeccccC
Confidence            99999999999999999999999 97

>PF01357 Pollen_allerg_1: Pollen allergen; InterPro: IPR007117 Expansins are unusual proteins that mediate cell wall extension in plants []

Probab=99.87  E-value=4.4e-22  Score=149.24  Aligned_cols=77  Identities=48%  Similarity=0.908  Sum_probs=64.1

Q ss_pred             eeEEEc--CCccceeEEEEeeCCCcceEEEEEEecC-CceeeccCCCCceEEeC-CCCCCcceEEEEEecC-CcEEEEcc
Q 025740          157 IRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSN-TYLNGQSLSFEVTTSD-GRTVTSYN  231 (249)
Q Consensus       157 i~~~v~--s~~~w~av~v~n~~G~~~I~sVei~~~g-~~W~~m~r~~g~~W~~~-~~~~g~p~~vRvT~~~-G~~v~~~~  231 (249)
                      |+|+|+  |++||++|+|.|++|.++|++|||++++ .+|++|+|+||++|+++ .++++ ||+||||+.+ |++++++|
T Consensus         1 v~f~V~~gS~~~~l~v~v~n~gG~gdi~~Vevk~~~s~~W~~m~r~wGa~W~~~~~~~~~-pls~Rvts~~~G~~vv~~n   79 (82)
T PF01357_consen    1 VRFTVKGGSNPYYLAVLVKNVGGDGDIKAVEVKQSGSGNWIPMKRSWGAVWQIDSNPPGG-PLSFRVTSGDSGQTVVADN   79 (82)
T ss_dssp             EEEEE-TT-BTTEEEEEEEECCTTS-EEEEEEEETTSSS-EE-EEECTTEEEEE-SS--S-SEEEEEEETTTSEEEEEEE
T ss_pred             CEEEECCCCCCcEEEEEEEEcCCCccEEEEEEEeCCCCCceEeecCcCceEEECCCCcCC-CEEEEEEEcCCCeEEEEec
Confidence            689998  4799999999999999999999999887 56999999999999998 66664 9999999977 99999999


Q ss_pred             ccC
Q 025740          232 VAP  234 (249)
Q Consensus       232 vip  234 (249)
                      |||
T Consensus        80 ViP   82 (82)
T PF01357_consen   80 VIP   82 (82)
T ss_dssp             EE-
T ss_pred             ccC
Confidence            998

They are believed to act as a sort of chemical grease, allowing polymers to slide past one another by disrupting non-covalent hydrogen bonds that hold many wall polymers to one another. This process is not degradative and hence does not weaken the wall, which could otherwise rupture under internal pressure during growth. Sequence comparisons indicate at least four distinct expansin cDNAs in rice and at least six in Arabidopsis. The proteins are highly conserved in size and sequence (75-95% amino acid sequence similarity between any pairwise comparison), and phylogenetic trees indicate that this multigene family formed before the evolutionary divergence of monocotyledons and dicotyledons []. Sequence and motif analyses show no similarities to known functional domains that might account for expansin action on wall extension. It is thought that several highly-conserved tryptophans may function in expansin binding to cellulose, or other glycans. The high conservation of the family indicates that the mechanism by which expansins promote wall extensin tolerates little variation in protein structure. Grass pollens, such as pollen from timothy grass, represent a major cause of type I allergy []. Interestingly, expansins share a high degree of sequence similarity with the Lol p I family of allergens. This entry represents the C-terminal domain.; PDB: 2VXQ_A 1WHP_A 1BMW_A 1WHO_A 2HCZ_X 2JNZ_A 3FT9_A 3FT1_C 1N10_B.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.77  E-value=6.2e-19  Score=130.50  Aligned_cols=73  Identities=38%  Similarity=0.821  Sum_probs=61.4

Q ss_pred             EEEeChhhcCCCCCCcceEEEEEcCC-CCC--cCC--CeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhh
Q 025740           61 TAALSTALFNNGLSCGSCYEIKCVND-PKW--CLP--GTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIA  135 (249)
Q Consensus        61 ~aA~s~~~~~~g~~CG~C~eV~c~~~-~~~--C~~--~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia  135 (249)
                      +||++..+|++|..||+||+++|... ...  |..  ++|+|+|+|+||+           |.  .+|||||+.||++|+
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~-----------~~--~~~lDLS~~aF~~la   67 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPG-----------CP--PNHLDLSPAAFKALA   67 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-TT-----------SS--SSEEEEEHHHHHHTB
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCCC-----------Cc--CCEEEeCHHHHHHhC
Confidence            48999999999999999999999321 222  877  8999999999998           85  699999999999999


Q ss_pred             hhcCCeeeEEE
Q 025740          136 QYRAGVVPVAY  146 (249)
Q Consensus       136 ~~~~G~~~i~w  146 (249)
                      .++.|+++|+|
T Consensus        68 ~~~~G~i~V~w   78 (78)
T PF03330_consen   68 DPDAGVIPVEW   78 (78)
T ss_dssp             STTCSSEEEEE
T ss_pred             CCCceEEEEEC
Confidence            99999999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=99.08  E-value=1.1e-10  Score=91.62  Aligned_cols=61  Identities=28%  Similarity=0.539  Sum_probs=44.9

Q ss_pred             CCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhh----hhcCCeeeEE
Q 025740           70 NNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIA----QYRAGVVPVA  145 (249)
Q Consensus        70 ~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia----~~~~G~~~i~  145 (249)
                      .+-..||+|++||....     +.+++|+|||+|+.                ++|||.+.+|++|-    ....|.+.|.
T Consensus        55 ~gq~~CGkClrVTNt~t-----ga~~~~RIVDqCsn----------------GGLDld~~vF~~iDtdG~G~~~Ghl~V~  113 (119)
T PF00967_consen   55 MGQDSCGKCLRVTNTAT-----GAQVTVRIVDQCSN----------------GGLDLDPTVFNQIDTDGQGYAQGHLIVD  113 (119)
T ss_dssp             -SGGGTT-EEEEE-TTT-------EEEEEEEEE-SS----------------SSEES-SSSHHHH-SSSHHHHHTEEEEE
T ss_pred             cCcccccceEEEEecCC-----CcEEEEEEEEcCCC----------------CCcccChhHHhhhccCCcccccceEEEE
Confidence            34578999999998764     24999999999886                57999999999995    3477999999


Q ss_pred             EEEeec
Q 025740          146 YKRVPC  151 (249)
Q Consensus       146 w~~V~C  151 (249)
                      |++|+|
T Consensus       114 y~fV~C  119 (119)
T PF00967_consen  114 YEFVDC  119 (119)
T ss_dssp             EEEE--
T ss_pred             EEEEcC
Confidence            999999

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.00  E-value=4.3e-05  Score=61.12  Aligned_cols=66  Identities=21%  Similarity=0.425  Sum_probs=47.2

Q ss_pred             eEEEeCh-hhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh--
Q 025740           60 NTAALST-ALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ--  136 (249)
Q Consensus        60 ~~aA~s~-~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~--  136 (249)
                      .|.+... +-|+ +..||.|+|++-.+       +++.|..+|.=+                 ..|+|+.+||+.|..  
T Consensus        44 ~IGg~~~V~gWn-S~~CGtC~~lty~g-------~si~vlaID~a~-----------------~gfnis~~A~n~LT~g~   98 (119)
T PF07249_consen   44 YIGGAPAVAGWN-SPNCGTCWKLTYNG-------RSIYVLAIDHAG-----------------GGFNISLDAMNDLTNGQ   98 (119)
T ss_dssp             SEEEETT--STT--TTTT-EEEEEETT-------EEEEEEEEEE-S-----------------SSEEE-HHHHHHHHTS-
T ss_pred             eeccccccccCC-CCCCCCeEEEEECC-------eEEEEEEEecCC-----------------CcccchHHHHHHhcCCc
Confidence            4666665 4464 57899999999832       499999999732                 459999999999986  


Q ss_pred             -hcCCeeeEEEEEee
Q 025740          137 -YRAGVVPVAYKRVP  150 (249)
Q Consensus       137 -~~~G~~~i~w~~V~  150 (249)
                       ...|+|+++|++|+
T Consensus        99 a~~lG~V~a~~~qV~  113 (119)
T PF07249_consen   99 AVELGRVDATYTQVD  113 (119)
T ss_dssp             CCCC-EEE-EEEEE-
T ss_pred             ccceeEEEEEEEEcC
Confidence             36799999999996

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>TIGR00413 rlpA rare lipoprotein A

Probab=97.83  E-value=0.00023  Score=61.85  Aligned_cols=96  Identities=19%  Similarity=0.202  Sum_probs=69.3

Q ss_pred             EEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCC
Q 025740           29 ARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNA  108 (249)
Q Consensus        29 g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~  108 (249)
                      |.|+|||....+  ...|.|-..  .  ...+.||-.      -...|..++|+...+.     .+|+|+|.|++|-.  
T Consensus         1 G~ASwYg~~f~G--~~TAnGe~y--~--~~~~tAAHk------tLPlgT~V~VtNl~ng-----rsviVrVnDRGPf~--   61 (208)
T TIGR00413         1 GLASWYGPKFHG--RKTANGEVY--N--MKALTAAHK------TLPFNTYVKVTNLHNN-----RSVIVRINDRGPFS--   61 (208)
T ss_pred             CEEeEeCCCCCC--CcCCCCeec--C--CCccccccc------cCCCCCEEEEEECCCC-----CEEEEEEeCCCCCC--
Confidence            679999864321  124444221  1  123444433      2377889999997652     49999999999962  


Q ss_pred             CCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEEeecCCC
Q 025740          109 LPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRR  154 (249)
Q Consensus       109 ~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C~~~  154 (249)
                                 +..-+|||..|+.+|+-...|+.+|+.+.+.....
T Consensus        62 -----------~gRiIDLS~aAA~~Lg~~~~G~a~V~vevl~~~~~   96 (208)
T TIGR00413        62 -----------DDRIIDLSHAAAREIGLISRGVGQVRIEVLHVAKN   96 (208)
T ss_pred             -----------CCCEEECCHHHHHHcCCCcCceEEEEEEEEecCCC
Confidence                       24679999999999999999999999999987754

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=97.74  E-value=0.00024  Score=62.77  Aligned_cols=59  Identities=15%  Similarity=0.239  Sum_probs=51.0

Q ss_pred             cceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEEeecC
Q 025740           76 GSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCG  152 (249)
Q Consensus        76 G~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C~  152 (249)
                      |.-.+|+..++.     .+|+|+|.|++|-            . ..-.+|||..|+++|+-...|+.+|+.+++.+.
T Consensus       120 ~t~v~VtNl~Ng-----rsvvVRINDRGPf------------~-~gRiIDlS~aAA~~l~~~~~G~a~V~i~~l~~~  178 (233)
T COG0797         120 PTYVRVTNLDNG-----RSVVVRINDRGPF------------V-SGRIIDLSKAAADKLGMIRSGVAKVRIEVLGVA  178 (233)
T ss_pred             CCEEEEEEccCC-----cEEEEEEeCCCCC------------C-CCcEeEcCHHHHHHhCCccCceEEEEEEEeccc
Confidence            456899998762     5999999999995            3 357899999999999999999999999999976

>PRK10672 rare lipoprotein A; Provisional

Probab=97.07  E-value=0.0081  Score=56.41  Aligned_cols=94  Identities=21%  Similarity=0.175  Sum_probs=62.9

Q ss_pred             EEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCC
Q 025740           28 NARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNN  107 (249)
Q Consensus        28 ~g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~  107 (249)
                      .|.|+|||....+  ...|.|--  ++  ...+.||-..      ..-|..++|+...+.     ++|+|+|.|++|-. 
T Consensus        80 ~G~ASwYg~~f~G--~~TA~Ge~--~~--~~~~tAAH~t------LPlps~vrVtNl~ng-----rsvvVrVnDRGP~~-  141 (361)
T PRK10672         80 AGLAAIYDAEAGS--NLTASGER--FD--PNALTAAHPT------LPIPSYVRVTNLANG-----RMIVVRINDRGPYG-  141 (361)
T ss_pred             EEEEEEeCCccCC--CcCcCcee--ec--CCcCeeeccC------CCCCCEEEEEECCCC-----cEEEEEEeCCCCCC-
Confidence            6889999864321  11222211  11  1134444432      356788999998752     59999999999962 


Q ss_pred             CCCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEEeec
Q 025740          108 ALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPC  151 (249)
Q Consensus       108 ~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C  151 (249)
                                  +..-+|||..|+.+|.-...+.++|+.-.|.=
T Consensus       142 ------------~gRiiDLS~aAA~~Lg~~~~~~V~ve~i~v~~  173 (361)
T PRK10672        142 ------------PGRVIDLSRAAADRLNTSNNTKVRIDPIIVAP  173 (361)
T ss_pred             ------------CCCeeEcCHHHHHHhCCCCCceEEEEEEeeCC
Confidence                        24679999999999988777778888777743

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=88.16  E-value=0.44  Score=41.43  Aligned_cols=53  Identities=26%  Similarity=0.317  Sum_probs=31.1

Q ss_pred             EEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCH
Q 025740           61 TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQ  128 (249)
Q Consensus        61 ~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~  128 (249)
                      +||++-.-......|++|||++=++.+  -..++.+|++++.=-+             -..+||||..
T Consensus        70 faA~~~~G~~e~~~Cc~Cy~LtFt~g~--l~GKkmiVQ~tNtG~d-------------lg~n~FDl~i  122 (201)
T PF02015_consen   70 FAAASITGGSESSWCCACYELTFTSGP--LKGKKMIVQVTNTGGD-------------LGSNQFDLAI  122 (201)
T ss_dssp             EEEEE-TT--HHHHTT-EEEEEE-SST--TTT-EEEEEEEEE-TT-------------TTTTEEEEE-
T ss_pred             eeeeeecCCCCCCcccceEEEEEcCCC--cCCCEeEEEecccCCC-------------CCCCeEEEEe
Confidence            566652222233689999999998643  3345999999986322             1368999975

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	249
2hcz_X	245	Crystal Structure Of Expb1 (Zea M 1), A Beta-Expans		7e-16
1n10_A	241	Crystal Structure Of Phl P 1, A Major Timothy Grass		3e-13

>pdb|2HCZ|X Chain X, Crystal Structure Of Expb1 (Zea M 1), A Beta-Expansin And Group-1 Pollen Allergen From Maize Length = 245

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 21  NGGGGWINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSC 78
           N  G W+ ARAT+Y               G  N+    Y   TA  +  +F +G  CGSC
Sbjct: 14  NYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSC 73
Query: 79  YEIKCVNDPKWCL--PGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ 136
           YE++C   P+ C   P T+ +T  N+                    HFDLS   F  +A+
Sbjct: 74  YEVRCKEKPE-CSGNPVTVYITDMNYEPIA--------------PYHFDLSGKAFGSLAK 118
Query: 137 -------YRAGVVPVAYKRVPCGRRGGIRFTINGHSYFN----LVLITNVGGAGDVHAVS 185
                     G++ V ++RV C    G +   +     N     VL+  V   GD+  + 
Sbjct: 119 PGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLME 178
Query: 186 IKGSRTG-WQPMSRNWGQNWQSNT--YLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRT 242
           I+   +  W+PM  +WG  W+ +T   L G   S  +T+  G+ V + +V PA W     
Sbjct: 179 IQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAV 237
Query: 243 Y-SGAQF 248
           Y S  QF
Sbjct: 238 YTSNVQF 244

>pdb|1N10|A Chain A, Crystal Structure Of Phl P 1, A Major Timothy Grass Pollen Allergen Length = 241

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 30/238 (12%)
Query: 23  GGGWINARATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYE 80
           G  W++A++T+Y                Y ++    +   T   +T +F +G  CGSC+E
Sbjct: 16  GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFE 75
Query: 81  IKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY--- 137
           IKC   P+ C    ++V  T+                     HFDLS   F  +A+    
Sbjct: 76  IKCTK-PEACSGEPVVVHITDDNEEPIAPY------------HFDLSGHAFGAMAKKGDE 122
Query: 138 ----RAGVVPVAYKRVPCGRRGGIRFTINGHSYFN----LVLITNVGGAGDVHAVSIKGS 189
                AG + + ++RV C    G + T +     N     +L+  V G GDV AV IK  
Sbjct: 123 QKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEK 182
Query: 190 -RTGWQPMSRNWGQNWQSNT--YLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 244
            +  W  +  +WG  W+ +T   L G   +   TT  G    + +V P GW    +Y 
Sbjct: 183 GKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYE 239

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	249
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	9e-73
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	2e-69
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	1e-60
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	2e-32
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	4e-32
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	1e-30
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	8e-23

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score =  221 bits (564), Expect = 9e-73
 Identities = 72/250 (28%), Positives = 110/250 (44%), Gaps = 31/250 (12%)

Query: 16  SSVHANGGGGWINARATFYGGGDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGL 73
            ++  N  G W+ ARAT+YG  + +G    GGACG  N+    Y   TA  +  +F +G 
Sbjct: 9   PNITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGK 68

Query: 74  SCGSCYEIKCVNDPKWCLPG-TIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQ 132
            CGSCYE++C   P+      T+ +T  N+ P                  HFDLS   F 
Sbjct: 69  GCGSCYEVRCKEKPECSGNPVTVYITDMNYEPIA--------------PYHFDLSGKAFG 114

Query: 133 HIAQ-------YRAGVVPVAYKRVPCGRRGGIRFTINGHSYFN----LVLITNVGGAGDV 181
            +A+          G++ V ++RV C    G +   +     N     VL+  V   GD+
Sbjct: 115 SLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDI 174

Query: 182 HAVSIKGSRTG-WQPMSRNWGQNWQSNTYLN-GQSLSFEVTTSDGRTVTSYNVAPAGWSF 239
             + I+   +  W+PM  +WG  W+ +T        S  +T+  G+ V + +V PA W  
Sbjct: 175 VLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRP 234

Query: 240 GRTY-SGAQF 248
              Y S  QF
Sbjct: 235 DAVYTSNVQF 244

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score =  212 bits (541), Expect = 2e-69
 Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 28/245 (11%)

Query: 16  SSVHANGGGGWINARATFYGGGDASGTM--GGACGYGNLYSQGYGTNTAALSTALFNNGL 73
            ++ A  G  W++A++T+YG    +G    GGACGY ++    +   T   +T +F +G 
Sbjct: 9   PNITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGR 68

Query: 74  SCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQH 133
            CGSC+EIKC   P+ C    ++V  T+                     HFDLS   F  
Sbjct: 69  GCGSCFEIKC-TKPEACSGEPVVVHITDDNE------------EPIAPYHFDLSGHAFGA 115

Query: 134 IAQ-------YRAGVVPVAYKRVPCGRRGGIRFTIN----GHSYFNLVLITNVGGAGDVH 182
           +A+         AG + + ++RV C    G + T +     +  +  +L+  V G GDV 
Sbjct: 116 MAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVV 175

Query: 183 AVSIK-GSRTGWQPMSRNWGQNWQSNTYLN-GQSLSFEVTTSDGRTVTSYNVAPAGWSFG 240
           AV IK   +  W  +  +WG  W+ +T        +   TT  G    + +V P GW   
Sbjct: 176 AVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAEDVIPEGWKAD 235

Query: 241 RTYSG 245
            +Y  
Sbjct: 236 TSYES 240

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score =  189 bits (481), Expect = 1e-60
 Identities = 45/236 (19%), Positives = 72/236 (30%), Gaps = 40/236 (16%)

Query: 22  GGGGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLS----CGS 77
                    AT+ G G      GGA     + S        A++ A  N G       GS
Sbjct: 2   AYDDLHEGYATYTGSG----YSGGAFLLDPIPSDME---ITAINPADLNYGGVKAALAGS 54

Query: 78  CYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQY 137
             E++          G   V  T+  P                    DLS   F+ I   
Sbjct: 55  YLEVEGPK-------GKTTVYVTDLYPE-----------GAR--GALDLSPNAFRKIGNM 94

Query: 138 RAGVVPVAYKRVPCGRRGGIRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTGWQP 195
           + G + + ++ V     G   + I   S  ++  + + N      V  +  +     W  
Sbjct: 95  KDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKYP--VMKMEYEKDGK-WIN 151

Query: 196 MSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYN--VAPAGWSFGRTYSG-AQF 248
           M +    ++ S       SL   +T   G+ V      +  +G S   T  G  QF
Sbjct: 152 MEKMDYNHFVSTNLG-TGSLKVRMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQF 206

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense} Length = 108

 Score =  113 bits (285), Expect = 2e-32
 Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 8/106 (7%)

Query: 146 YKRVPCGRRGGIRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQ 202
           +      +   + FT+   S     ++ I        +  V ++   +  W+P+++  G 
Sbjct: 7   HHHGSAVQ---VTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GN 62

Query: 203 NWQSNTYLNGQ-SLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 247
            W+  +        +F   +  G       V P  +S G+TY   +
Sbjct: 63  VWEVKSSKPLVGPFNFRFMSKGGMRNVFDEVIPTAFSIGKTYKPEE 108

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A Length = 96

 Score =  112 bits (281), Expect = 4e-32
 Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 4/94 (4%)

Query: 157 IRFTIN-GHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQ- 213
           + FT+  G +  +L ++    G   +  V ++   +  W  M++  G  W  ++    Q 
Sbjct: 4   VTFTVEKGSNEKHLAVLVKYEG-DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG 62

Query: 214 SLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 247
             +F   T  G      +V P  ++ G TY+  +
Sbjct: 63  PFNFRFLTEKGMKNVFDDVVPEKYTIGATYAPEE 96

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} PDB: 3ft9_A Length = 100

 Score =  108 bits (272), Expect = 1e-30
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 157 IRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQ 213
           + FT+   S     ++ I        +  V ++   +  W+P+++  G  W+  +     
Sbjct: 4   VTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLV 62

Query: 214 -SLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQF 248
              +F   +  G       V P  +S G+TY    Q 
Sbjct: 63  GPFNFRFMSKGGMRNVFDEVIPTAFSIGKTYKPEEQE 99

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1 Length = 181

 Score = 90.8 bits (224), Expect = 8e-23
 Identities = 29/167 (17%), Positives = 41/167 (24%), Gaps = 28/167 (16%)

Query: 24  GGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNN------GLSCGS 77
            G   A  T Y          G       +    G+  AA S   F++      G  CG 
Sbjct: 12  NGKSCASTTNYHDSHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQ 71

Query: 78  CYEIKCVNDPKWCLPG------TIMVTATNFCPPNNALPNNAGGWCNPPQQ--------- 122
           C ++           G      +     TN CP           WCN   Q         
Sbjct: 72  CIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPN----QDWCNQGSQYGGHNKYGY 127

Query: 123 --HFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYF 167
             H DL       +           ++ V C            +S +
Sbjct: 128 ELHLDLENG-RSQVTGMGWNNPETTWEVVNCDSEHNHDHRTPSNSMY 173

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	249
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	100.0
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	100.0
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	100.0
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.97
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	99.95
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	99.94
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	99.91
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.66
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.28
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	97.96
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	97.85
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	97.82
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	97.69
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	97.66
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.52
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	93.75

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=100.00  E-value=1.1e-63  Score=440.80  Aligned_cols=214  Identities=31%  Similarity=0.634  Sum_probs=190.7

Q ss_pred             ccCCCCCceEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEE
Q 025740           19 HANGGGGWINARATFYGGGDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIM   96 (249)
Q Consensus        19 ~~~~~~~~~~g~aT~Y~~~~~~~~--~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~   96 (249)
                      ++.+.++|+.|+||||+++++.|+  .+|||||++++..|++.++||+|+++|++|+.||+||||+|.+++ .|.+++|+
T Consensus        12 ~~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~-~C~~~~v~   90 (241)
T 1n10_A           12 TATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPE-ACSGEPVV   90 (241)
T ss_dssp             CCBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSST-TBCSCCEE
T ss_pred             CCcccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCC-ccCCCCEE
Confidence            345778999999999999887676  789999999888889999999999999999999999999998754 69989999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh-------hcCCeeeEEEEEeecCCCC--ceeEEEc--CCc
Q 025740           97 VTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG--GIRFTIN--GHS  165 (249)
Q Consensus        97 v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~-------~~~G~~~i~w~~V~C~~~g--ni~~~v~--s~~  165 (249)
                      |+|||+|+            |.++..|||||+.||++||.       +..|+++|+||||+|+++|  ||+|+|+  +++
T Consensus        91 V~VtD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~  158 (241)
T 1n10_A           91 VHITDDNE------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNP  158 (241)
T ss_dssp             EEEEEECS------------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBT
T ss_pred             EEEeEecC------------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCc
Confidence            99999996            65568999999999999999       7899999999999999984  8999999  699


Q ss_pred             cceeEEEEeeCCCcceEEEEEEecC-CceeeccCCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCeE
Q 025740          166 YFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTY--LNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRT  242 (249)
Q Consensus       166 ~w~av~v~n~~G~~~I~sVei~~~g-~~W~~m~r~~g~~W~~~~~--~~g~p~~vRvT~~~G~~v~~~~vip~~w~~G~~  242 (249)
                      ||++|+|+|++|.++|++|||++++ ..|++|+|+|||+|+++..  +.+ ||+||||+.+|++|+++||||++|++|.+
T Consensus       159 ~~~~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~t  237 (241)
T 1n10_A          159 NYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTS  237 (241)
T ss_dssp             TEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEEEEECSSCCSSEE
T ss_pred             ceEEEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeCCcEEEEccccCCCCCCCCE
Confidence            9999999999999999999999987 6899999999999999874  676 99999999999999999999999999999


Q ss_pred             EeCC
Q 025740          243 YSGA  246 (249)
Q Consensus       243 Y~~~  246 (249)
                      |+++
T Consensus       238 y~~~  241 (241)
T 1n10_A          238 YESK  241 (241)
T ss_dssp             EEC-
T ss_pred             EeCC
Confidence            9974

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=100.00  E-value=9.3e-64  Score=442.40  Aligned_cols=216  Identities=34%  Similarity=0.673  Sum_probs=199.0

Q ss_pred             cCCCCCceEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEE
Q 025740           20 ANGGGGWINARATFYGGGDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMV   97 (249)
Q Consensus        20 ~~~~~~~~~g~aT~Y~~~~~~~~--~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v   97 (249)
                      ..+.++|+.|+||||+++++.++  .+|||||++++..|++.++||+|+++|++|++||+||||+|.+.+ .|.+++|+|
T Consensus        13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~-~C~~~sv~V   91 (245)
T 2hcz_X           13 TNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKP-ECSGNPVTV   91 (245)
T ss_dssp             SCCCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSS-SBCSSCEEE
T ss_pred             cccCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCC-ccCCCCEEE
Confidence            34678999999999999887776  789999999887889999999999999999999999999998754 699889999


Q ss_pred             EEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh-------hcCCeeeEEEEEeecCCCC--ceeEEEc--CCcc
Q 025740           98 TATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG--GIRFTIN--GHSY  166 (249)
Q Consensus        98 ~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~-------~~~G~~~i~w~~V~C~~~g--ni~~~v~--s~~~  166 (249)
                      +|||+||            |..+.+|||||+.||++||.       ...|+++|+||||+|++++  ||+|+|+  +++|
T Consensus        92 ~VtD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~  159 (245)
T 2hcz_X           92 YITDMNY------------EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPN  159 (245)
T ss_dssp             EEEEECC------------CTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSS
T ss_pred             EEEeccC------------CCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcc
Confidence            9999998            43358999999999999999       6899999999999999983  7999999  6999


Q ss_pred             ceeEEEEeeCCCcceEEEEEEecC-CceeeccCCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCeEE
Q 025740          167 FNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTY--LNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY  243 (249)
Q Consensus       167 w~av~v~n~~G~~~I~sVei~~~g-~~W~~m~r~~g~~W~~~~~--~~g~p~~vRvT~~~G~~v~~~~vip~~w~~G~~Y  243 (249)
                      |++|+|+|++|+++|++|||++++ ..|++|+|+|||+|+++..  +++ ||+||||+.+|++|+++||||++|++|.+|
T Consensus       160 ~~avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty  238 (245)
T 2hcz_X          160 YLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVY  238 (245)
T ss_dssp             CCCEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETTSCEEEESCSCCSSCCTTCEE
T ss_pred             eEEEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeCCcEEEEeeeecCCCCCCCEE
Confidence            999999999999999999999987 4899999999999999874  676 999999999999999999999999999999


Q ss_pred             eCC-CCC
Q 025740          244 SGA-QFR  249 (249)
Q Consensus       244 ~~~-q~~  249 (249)
                      +++ ||+
T Consensus       239 ~~~~qf~  245 (245)
T 2hcz_X          239 TSNVQFY  245 (245)
T ss_dssp             ECSCCCC
T ss_pred             eCccccC
Confidence            999 984

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=100.00  E-value=3.3e-53  Score=367.00  Aligned_cols=193  Identities=22%  Similarity=0.297  Sum_probs=174.3

Q ss_pred             CCceEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCC----CCCcceEEEEEcCCCCCcCCCeEEEEE
Q 025740           24 GGWINARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG----LSCGSCYEIKCVNDPKWCLPGTIMVTA   99 (249)
Q Consensus        24 ~~~~~g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~eV~c~~~~~~C~~~sv~v~V   99 (249)
                      ++.+.|+||||++..    .+||||+..   .+++.++||+++.+|++|    ..||+||||+|.+       ++|+|+|
T Consensus         4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~~-------gsv~V~v   69 (208)
T 3d30_A            4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGPK-------GKTTVYV   69 (208)
T ss_dssp             TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEETT-------EEEEEEE
T ss_pred             CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeCC-------CcEEEEE
Confidence            456799999999754    379999863   356789999999999987    8999999999932       5899999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEEeecCCCCceeEEEc--CCccceeEEEEeeCC
Q 025740          100 TNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTIN--GHSYFNLVLITNVGG  177 (249)
Q Consensus       100 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C~~~gni~~~v~--s~~~w~av~v~n~~G  177 (249)
                      +|+||.           |.  ..|||||+.||++||.++.|+++|+||+|+|+++|+|+|+++  +++||++|||+|++|
T Consensus        70 ~D~CP~-----------C~--~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~g  136 (208)
T 3d30_A           70 TDLYPE-----------GA--RGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY  136 (208)
T ss_dssp             EEECTT-----------CC--TTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCSS
T ss_pred             EECCCC-----------CC--CCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecCC
Confidence            999998           94  799999999999999999999999999999999999999999  799999999999985


Q ss_pred             CcceEEEEEEecCCceeeccCCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCCCC----CeEEeCC-CCC
Q 025740          178 AGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSF----GRTYSGA-QFR  249 (249)
Q Consensus       178 ~~~I~sVei~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvT~~~G~~v~~~~vip~~w~~----G~~Y~~~-q~~  249 (249)
                        +|++|||+++ +.|++|+|+|+|+|..+..+. .||+||||+.+|++|  .++||++|++    |.+|+++ ||+
T Consensus       137 --~v~~v~i~~~-~~W~~m~r~~~n~~~~~~~~~-~pls~rvT~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf~  207 (208)
T 3d30_A          137 --PVMKMEYEKD-GKWINMEKMDYNHFVSTNLGT-GSLKVRMTDIRGKVV--KDTIPKLPESGTSKAYTVPGHVQFP  207 (208)
T ss_dssp             --CEEEEEEEET-TEEEEEEECTTSCEEEECCCS-SSEEEEEEETTCCEE--EEEECCCCSSCCSSCEEEECCCCCC
T ss_pred             --CEEEEEEecC-CcEEEccccccceeecCCCCC-CCEEEEEEECCCCEE--EEEECCCCccCcccceEEeCcCccC
Confidence              9999999988 689999999999998765454 599999999999999  7999999997    8999999 995

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.97  E-value=3.3e-31  Score=221.58  Aligned_cols=126  Identities=25%  Similarity=0.432  Sum_probs=105.9

Q ss_pred             CCceEEEEEEeCCCCCCCCCccccCCC-----cCCCCCCCCeEEEeChhhcCCC------CCCcceEEEEEcCCC-----
Q 025740           24 GGWINARATFYGGGDASGTMGGACGYG-----NLYSQGYGTNTAALSTALFNNG------LSCGSCYEIKCVNDP-----   87 (249)
Q Consensus        24 ~~~~~g~aT~Y~~~~~~~~~~GaCgy~-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~C~eV~c~~~~-----   87 (249)
                      .+|..++||||++..     +|||||+     ++++++++.++||+|+++|++|      +.||+||||+|.+++     
T Consensus        12 ~g~~~A~aT~Yg~~~-----gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg   86 (181)
T 1wc2_A           12 NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (181)
T ss_dssp             TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceeEecCCC-----CcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence            569999999999864     6999999     5566667899999999999997      899999999997653     


Q ss_pred             CCcCCC-eEEEEEeCCCCCCCCCCCCCCCCCCCC-----------CCceecCHHHHHHhhhhcCCeeeEEEEEeecCCCC
Q 025740           88 KWCLPG-TIMVTATNFCPPNNALPNNAGGWCNPP-----------QQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRG  155 (249)
Q Consensus        88 ~~C~~~-sv~v~V~D~Cp~~~~~~~~~~~~C~~~-----------~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C~~~g  155 (249)
                      ..|.++ +|+|||||+||.+    ++|++||+++           +.||||+..| .+||....|+++|+||+|+|+..+
T Consensus        87 ~~~~~g~SI~VtaTN~CPpn----~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~~~  161 (181)
T 1wc2_A           87 GPVREGLSKTFMITNLCPNI----YPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDSEH  161 (181)
T ss_dssp             CCCCTTCEEEEEEEEEECSS----TTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHHHH
T ss_pred             ccCCCCCeEEEEEecCCCCC----CCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCCCC
Confidence            234445 8999999999953    4578999753           6899999999 899999999999999999998744


Q ss_pred             ceeE
Q 025740          156 GIRF  159 (249)
Q Consensus       156 ni~~  159 (249)
                      |+..
T Consensus       162 ~~~~  165 (181)
T 1wc2_A          162 NHDH  165 (181)
T ss_dssp             HHCT
T ss_pred             CcCc
Confidence            4433

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A

Probab=99.95  E-value=4.9e-28  Score=186.52  Aligned_cols=91  Identities=21%  Similarity=0.429  Sum_probs=86.4

Q ss_pred             ceeEEEc--CCccceeEEEEeeCCCcceEEEEEEecCC-ceeeccCCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025740          156 GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNT--YLNGQSLSFEVTTSDGRTVTSY  230 (249)
Q Consensus       156 ni~~~v~--s~~~w~av~v~n~~G~~~I~sVei~~~g~-~W~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~~  230 (249)
                      +|+|+|+  |++||++|+|.|++|++||.+|||+++++ .|++|+| ||+.|+++.  +|+| ||+||||+.+|+++++.
T Consensus         3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~G~~~v~~   80 (100)
T 3ft1_A            3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD   80 (100)
T ss_dssp             EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETTCCEEEEE
T ss_pred             CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence            7999998  69999999999999999999999999985 7999999 999999986  6887 99999999999999999


Q ss_pred             cccCCCCCCCeEEeCC-CC
Q 025740          231 NVAPAGWSFGRTYSGA-QF  248 (249)
Q Consensus       231 ~vip~~w~~G~~Y~~~-q~  248 (249)
                      ||||++|++|.+|+++ ||
T Consensus        81 nViPa~W~~G~ty~s~vq~   99 (100)
T 3ft1_A           81 EVIPTAFSIGKTYKPEEQE   99 (100)
T ss_dssp             EEECTTCCTTCEECCCCBC
T ss_pred             eEeCCCCCCCcEEeccccc
Confidence            9999999999999999 86

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}

Probab=99.94  E-value=2.9e-26  Score=178.52  Aligned_cols=89  Identities=20%  Similarity=0.458  Sum_probs=83.7

Q ss_pred             ceeEEEc--CCccceeEEEEeeCCCcceEEEEEEe-cCCceeeccCCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025740          156 GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKG-SRTGWQPMSRNWGQNWQSNT--YLNGQSLSFEVTTSDGRTVTSY  230 (249)
Q Consensus       156 ni~~~v~--s~~~w~av~v~n~~G~~~I~sVei~~-~g~~W~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~~  230 (249)
                      ||.|+|+  |++||++|+|.|++|++||.+|||++ +...|++|+|+ |++|+++.  +|.| ||+||||+.+|+++++.
T Consensus        14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G~~~va~   91 (108)
T 2jnz_A           14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD   91 (108)
T ss_dssp             EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTTEEEEEE
T ss_pred             cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence            8999998  69999999999999999999999997 44789999999 99999986  7887 99999999999999999


Q ss_pred             cccCCCCCCCeEEeCC
Q 025740          231 NVAPAGWSFGRTYSGA  246 (249)
Q Consensus       231 ~vip~~w~~G~~Y~~~  246 (249)
                      ||||++|+||.+|+++
T Consensus        92 nViPa~W~~Gqty~s~  107 (108)
T 2jnz_A           92 EVIPTAFSIGKTYKPE  107 (108)
T ss_dssp             EEECSSCCTTCEECCC
T ss_pred             eEECCCCCCCCEEeCC
Confidence            9999999999999975

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A

Probab=99.91  E-value=5.8e-26  Score=173.81  Aligned_cols=88  Identities=23%  Similarity=0.461  Sum_probs=81.6

Q ss_pred             ceeEEEc--CCccceeEEEEeeCCCcceEEEEEEec-CCceeeccCCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025740          156 GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGS-RTGWQPMSRNWGQNWQSNT--YLNGQSLSFEVTTSDGRTVTSY  230 (249)
Q Consensus       156 ni~~~v~--s~~~w~av~v~n~~G~~~I~sVei~~~-g~~W~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~~  230 (249)
                      +|+|+|+  |++||++|+|.|++  +||.+|||+++ ...|++|+|+||++|+++.  +|.| ||+||||+.+|++++++
T Consensus         3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~G~~~v~~   79 (96)
T 1bmw_A            3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD   79 (96)
T ss_dssp             CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETTTEECCBS
T ss_pred             CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcCCcEEEEe
Confidence            7899998  79999999999998  79999999995 5789999999999999987  5777 99999999999999999


Q ss_pred             cccCCCCCCCeEEeCC
Q 025740          231 NVAPAGWSFGRTYSGA  246 (249)
Q Consensus       231 ~vip~~w~~G~~Y~~~  246 (249)
                      ||||++|+||.+|+++
T Consensus        80 nViP~~W~~G~ty~~~   95 (96)
T 1bmw_A           80 DVVPEKYTIGATYAPE   95 (96)
T ss_dssp             SCSCSSCCSSSCCCC-
T ss_pred             eEeCCCCCCCCEEeCC
Confidence            9999999999999974

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.66  E-value=4.1e-17  Score=129.68  Aligned_cols=62  Identities=26%  Similarity=0.546  Sum_probs=55.8

Q ss_pred             CCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecC-HHHHHHhhh----hcCCeeeE
Q 025740           70 NNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLS-QPVFQHIAQ----YRAGVVPV  144 (249)
Q Consensus        70 ~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs-~~AF~~ia~----~~~G~~~i  144 (249)
                      +++..||+|++|++..+     +++|+|+|+|+||.           |     +|||| ++||++|+.    .+.|+++|
T Consensus        58 ~~g~~CG~cv~Vtn~~n-----GksV~V~VvD~CP~-----------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i~V  116 (125)
T 1bw3_A           58 RGQAACGKCLRVTNPAT-----GAQITARIVDQCAN-----------G-----GLDLDWDTVFTKIDTNGIGYQQGHLNV  116 (125)
T ss_dssp             CSGGGTTCEEEEEETTT-----TEEEEEEEEECCSS-----------S-----SCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred             CCCcccCCEEEeEeCCC-----CCEEEEEEEEeCCC-----------C-----CCCCCCHHHHHHHhccCCcccCcEEEE
Confidence            78899999999999653     25999999999997           4     39999 999999998    78999999


Q ss_pred             EEEEeecC
Q 025740          145 AYKRVPCG  152 (249)
Q Consensus       145 ~w~~V~C~  152 (249)
                      +|++|+|+
T Consensus       117 ~w~~V~C~  124 (125)
T 1bw3_A          117 NYQFVDCR  124 (125)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEeCC
Confidence            99999996

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.28  E-value=3.9e-11  Score=91.01  Aligned_cols=94  Identities=21%  Similarity=0.298  Sum_probs=73.8

Q ss_pred             eEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCC
Q 025740           27 INARATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPN  106 (249)
Q Consensus        27 ~~g~aT~Y~~~~~~~~~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~  106 (249)
                      ..|.|+||+.....  ...|||--..    ...++||-.      ...||..++|+...+     +++|+|+|.|+||. 
T Consensus         2 ~~G~ASwYg~~f~G--~~TA~Ge~~~----~~~~tAAH~------tlP~gt~vrVtNl~n-----GksVvVrVnDRGP~-   63 (95)
T 4avr_A            2 DTGEASYYGSRHAG--LRTASGERYN----PNAMTAAHR------TLPFGARVRVTNLDN-----RRSVVVRINDRGPF-   63 (95)
T ss_dssp             EEEEEEECCGGGTT--SBCTTSCBCC----TTSCEEECS------SSCTTCEEEEEETTT-----CCEEEEEEEECCCC-
T ss_pred             CEEEEEEECCccCC--CCCCCccCcC----CCCCEEEcC------CCCCCcEEEEEECCC-----CcEEEEEEccCCCC-
Confidence            47999999964221  2588875321    235678776      347999999999765     25999999999998 


Q ss_pred             CCCCCCCCCCCCCCCCceecCHHHHHHhhhhcCCeeeEEEEEee
Q 025740          107 NALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVP  150 (249)
Q Consensus       107 ~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~~~G~~~i~w~~V~  150 (249)
                                |.  ...+|||..||++|+..+.|+.+|+|+.+.
T Consensus        64 ----------~~--griIDLS~aAa~~Lg~~~~G~~~V~ve~~~   95 (95)
T 4avr_A           64 ----------RR--GRIIDVSRKAAEGLGMIRSGVAPVRIESLD   95 (95)
T ss_dssp             ----------ST--TEEEEECHHHHHHHTCTTTSCEEEEEEEC-
T ss_pred             ----------CC--CCEEEeCHHHHHHhCCcCCCEEEEEEEEeC
Confidence                      75  478999999999999999999999999863

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=97.96  E-value=3e-05  Score=61.44  Aligned_cols=67  Identities=24%  Similarity=0.492  Sum_probs=54.1

Q ss_pred             eEEEeCh-hhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh-h
Q 025740           60 NTAALST-ALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ-Y  137 (249)
Q Consensus        60 ~~aA~s~-~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~-~  137 (249)
                      +|.+... +-|+ ...||.|+||+-..      +++|.|+.+|.=+                 ..|+++.+||+.|.. .
T Consensus        51 ~IGga~~iagWN-S~~CGtC~~lty~n------g~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G~  106 (129)
T 2kqa_A           51 NVGGIPDIAGWD-SPSCGTCWKVTIPN------GNSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGST  106 (129)
T ss_dssp             SEEEETTCCSTT-CTTCSCEEEEEETT------TEEEEEEEEEECS-----------------SSEEECHHHHHHHHSSS
T ss_pred             eeccchhhccCC-CCCCCceEEEEEcC------CCEEEEEEEccCC-----------------CceeehHHHHHHhcCCc
Confidence            4555554 4466 79999999999942      1599999999743                 459999999999987 6


Q ss_pred             cCCee-eEEEEEee
Q 025740          138 RAGVV-PVAYKRVP  150 (249)
Q Consensus       138 ~~G~~-~i~w~~V~  150 (249)
                      ..|+| +++|++|+
T Consensus       107 ~lG~V~~a~~~qV~  120 (129)
T 2kqa_A          107 EAGRVDNVNYVQVD  120 (129)
T ss_dssp             SSCCBCSCEEEECC
T ss_pred             ccCcEeEEEEEEcC
Confidence            78999 99999996

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=97.85  E-value=5.5e-05  Score=59.56  Aligned_cols=68  Identities=25%  Similarity=0.427  Sum_probs=53.2

Q ss_pred             eEEEeCh-hhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh--
Q 025740           60 NTAALST-ALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ--  136 (249)
Q Consensus        60 ~~aA~s~-~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~--  136 (249)
                      +|.+... +-|++ ..||.|+|++-...     +++|.|..+|.=+                 ..|+|+.+||+.|.+  
T Consensus        45 FIGg~~~V~gwnS-~~CGtC~~lty~~~-----g~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~  101 (122)
T 3sul_A           45 YVGAVDTITGWNS-ESCGTCYQITWSGT-----GKTIHVVGVDVAG-----------------NGFNVGQRAMDDLTNGQ  101 (122)
T ss_dssp             EEEEETTCCSTTC-TTTTCEEEEEETTT-----TEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSC
T ss_pred             ccccccccccCCC-CCCCceEEEEEcCC-----CcEEEEEEEecCC-----------------CceeehHHHHHHhcCCc
Confidence            3655544 45665 99999999999631     2499999999743                 349999999999984  


Q ss_pred             -hcCCeeeEEEEEee
Q 025740          137 -YRAGVVPVAYKRVP  150 (249)
Q Consensus       137 -~~~G~~~i~w~~V~  150 (249)
                       ...|+|++++++|+
T Consensus       102 a~~lG~V~a~~~qV~  116 (122)
T 3sul_A          102 AVALGNIDVTATLVD  116 (122)
T ss_dssp             HHHHSEEEEEEEEEC
T ss_pred             ceecceEeEEEEEcC
Confidence             24699999999997

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=97.82  E-value=5.7e-05  Score=59.32  Aligned_cols=66  Identities=23%  Similarity=0.458  Sum_probs=52.1

Q ss_pred             eEEEeCh-hhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh--
Q 025740           60 NTAALST-ALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ--  136 (249)
Q Consensus        60 ~~aA~s~-~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~--  136 (249)
                      +|.+... .-|+ ...||.|+|++-.+       ++|.|..+|.=+                 ..|+|+.+||+.|..  
T Consensus        45 ~IGg~~~i~gwn-s~~CGtC~~lty~g-------~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G~   99 (120)
T 3m3g_A           45 YIGGAAAVAGWN-SASCGTCWKLQYSG-------HTIYVLAVDHAA-----------------SGFNIALDAMNALTGGQ   99 (120)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEETT-------EEEEEEEEEECS-----------------SSEEECHHHHHHHHTSC
T ss_pred             ccccccccccCC-CCCCCceEEEEECC-------eEEEEEEEecCC-----------------CceeecHHHHHHhhCCc
Confidence            4555543 4465 47999999999842       499999999743                 459999999999985  


Q ss_pred             -hcCCeeeEEEEEee
Q 025740          137 -YRAGVVPVAYKRVP  150 (249)
Q Consensus       137 -~~~G~~~i~w~~V~  150 (249)
                       ...|+|++++++|+
T Consensus       100 a~~lG~V~a~~~~V~  114 (120)
T 3m3g_A          100 AVQLGRVSATATQVP  114 (120)
T ss_dssp             HHHHCEEECEEEEEC
T ss_pred             ceeeeeEeEEEEEcC
Confidence             24599999999997

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.69  E-value=0.00011  Score=58.07  Aligned_cols=70  Identities=23%  Similarity=0.441  Sum_probs=52.8

Q ss_pred             eEEEeCh-hhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh--
Q 025740           60 NTAALST-ALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ--  136 (249)
Q Consensus        60 ~~aA~s~-~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~--  136 (249)
                      +|.+... .-|+ ...||.|+|++-.+. .  ..++|.|..+|.=+                 ..|+|+.+||+.|.+  
T Consensus        46 ~IGg~~~i~gwn-S~~CGtC~~lty~g~-~--~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~  104 (125)
T 3suk_A           46 HIGASSDIGGFN-SPACGNCYTISFTFQ-G--VTRSINLVAIDHAG-----------------NGFNVAQAAMDELTNGN  104 (125)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEEEET-T--EEEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSC
T ss_pred             eeccccccccCC-CCCCCeeEEEEEcCC-C--cceEEEEEEEecCC-----------------CceeecHHHHHHhcCCc
Confidence            3555543 4466 479999999998641 1  01399999999743                 449999999999985  


Q ss_pred             -hcCCeeeEEEEEee
Q 025740          137 -YRAGVVPVAYKRVP  150 (249)
Q Consensus       137 -~~~G~~~i~w~~V~  150 (249)
                       ...|+|+++|++|+
T Consensus       105 a~~lG~V~~~~~~V~  119 (125)
T 3suk_A          105 AVALGTIDVQSQQVA  119 (125)
T ss_dssp             HHHHCEEEEEEEEEC
T ss_pred             ccccceEeEEEEEcC
Confidence             34599999999997

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.66  E-value=7.3e-05  Score=59.27  Aligned_cols=71  Identities=24%  Similarity=0.436  Sum_probs=52.9

Q ss_pred             eEEEeC-hhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhh-
Q 025740           60 NTAALS-TALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQY-  137 (249)
Q Consensus        60 ~~aA~s-~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~-  137 (249)
                      +|.+.. -.-|+ ...||.|+|++-.+...  ..++|.|..+|.=+                 ..|+|+.+||+.|.+- 
T Consensus        45 ~IGg~~~i~gwn-s~~CGtC~~lty~g~~~--~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~g~  104 (127)
T 3suj_A           45 CIGGSSDIAGYN-SPNCGSCYQLTYSSAHT--TPKSIYMVAIDRSA-----------------EGFTASKQAMDDLTNKR  104 (127)
T ss_dssp             SEEEETTCCSTT-CTTTTCEEEEEECCSSS--CCEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSC
T ss_pred             eeccccccccCC-CCCCCceEEEEECCCCC--cceEEEEEEEecCC-----------------CceeecHHHHHHhcCCc
Confidence            355544 24465 47999999999865210  12499999999743                 3499999999999842 


Q ss_pred             --cCCeeeEEEEEee
Q 025740          138 --RAGVVPVAYKRVP  150 (249)
Q Consensus       138 --~~G~~~i~w~~V~  150 (249)
                        ..|+|+++|++|+
T Consensus       105 a~~lG~V~~~~~~V~  119 (127)
T 3suj_A          105 AEELGTVNVDVRKVD  119 (127)
T ss_dssp             HHHHSSEEEEEEEEC
T ss_pred             cccceeEEEEEEEeC
Confidence              4589999999997

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.52  E-value=0.00031  Score=56.05  Aligned_cols=65  Identities=17%  Similarity=0.306  Sum_probs=51.2

Q ss_pred             eEEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhh---
Q 025740           60 NTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQ---  136 (249)
Q Consensus        60 ~~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~---  136 (249)
                      +|.++.   |+ ...||.|+||+-.+       ++|.|..+|.=.+               ..-|||+.+||+.|..   
T Consensus        49 ~igg~~---wn-s~~CGtCwkLtY~G-------~sI~vlaID~a~~---------------g~~FnIs~~Amn~LT~G~~  102 (136)
T 3sum_A           49 HFVAAP---EA-QTECGSCWKLRYKG-------NHAFVTVVDRVEE---------------ANLFVGGTDLVKNLTTFNG  102 (136)
T ss_dssp             SEEECC---BT-TBCTTCEEEEEETT-------EEEEEEEEECCCS---------------TTEEEECHHHHHHHTCBTT
T ss_pred             cccccc---cC-CCCCCceEEEEECC-------eEEEEEEEecCCC---------------cceEeehHHHHHHHhCCCc
Confidence            466665   55 58999999999853       4999999997332               1239999999999974   


Q ss_pred             ----hcCCeeeE-EEEEee
Q 025740          137 ----YRAGVVPV-AYKRVP  150 (249)
Q Consensus       137 ----~~~G~~~i-~w~~V~  150 (249)
                          ...|+|++ +|++|+
T Consensus       103 a~~a~elG~Vda~~~~qVd  121 (136)
T 3sum_A          103 APEGYDWGTAQLFSAYQVD  121 (136)
T ss_dssp             BCHHHHHSEEECSEEEEEC
T ss_pred             cccceecceeeeeEEEEcC
Confidence                24599999 999997

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=93.75  E-value=0.034  Score=47.22  Aligned_cols=53  Identities=30%  Similarity=0.369  Sum_probs=34.8

Q ss_pred             EEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCH
Q 025740           61 TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQ  128 (249)
Q Consensus        61 ~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~  128 (249)
                      +||++-.--.....|++|||++=++.+  ..+++.+|+||+...+-             ..+||||..
T Consensus        72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~--~~GKkmiVQ~TNtG~Dl-------------~~n~FDl~i  124 (210)
T 2eng_A           72 FAATSIAGSNEAGWCCACYELTFTSGP--VAGKKMVVQSTSTGGDL-------------GSNHFDLNI  124 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGG--GTTCEEEEEEEEC------------------CCEEEEEC
T ss_pred             eeeeeccCCccccccceeEEEEEcCCC--cCCCEEEEEEecccCCC-------------CCCceeEec
Confidence            566662211223679999999998753  44579999999987651             268999964

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	249
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	5e-45
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	2e-44
d1n10a1	95	b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {T	6e-34
d1whoa_	94	b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum praten	4e-28

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score =  147 bits (371), Expect = 5e-45
 Identities = 34/180 (18%), Positives = 47/180 (26%), Gaps = 38/180 (21%)

Query: 17  SVHANGGGGWINARATFYGGGDASGTMGGACGYGNL-----YSQGYGTNTAALSTALFNN 71
           S +     G   A  T Y          GACG G       +    G+  AA S   F++
Sbjct: 5   SGNPRRYNGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDS 59

Query: 72  ------GLSCGSCYEIKCVNDPKWCLPG------TIMVTATNFCPPNNALPNNAGGWCNP 119
                 G  CG C ++           G      +     TN CP           WCN 
Sbjct: 60  GNKGWCGQHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNI----YPNQDWCNQ 115

Query: 120 PQQ-----------HFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFN 168
             Q           H DL       +           ++ V C            +S + 
Sbjct: 116 GSQYGGHNKYGYELHLDLE-NGRSQVTGMGWNNPETTWEVVNCDSEHNHDHRTPSNSMYG 174

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  144 bits (365), Expect = 2e-44
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 17  SVHANGGGGWINARATFYGGGDASGTM--GGACGYGNLYSQGYGTNTAALSTALFNNGLS 74
           ++ A  G  W++A++T+YG    +G    GGACGY ++    +   T   +T +F +G  
Sbjct: 8   NITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRG 67

Query: 75  CGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHI 134
           CGSC+EIKC   P+ C    ++V  T+           A    +     F          
Sbjct: 68  CGSCFEIKC-TKPEACSGEPVVVHITDDNE-----EPIAPYHFDLSGHAFGAMAKKGDEQ 121

Query: 135 AQYRAGVVPVAYKRVPCGRRGG 156
               AG + + ++RV C    G
Sbjct: 122 KLRSAGELELQFRRVKCKYPEG 143

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 95

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  115 bits (291), Expect = 6e-34
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 157 IRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQ 213
           + F +   S   +  +L+  V G GDV AV IK      W  +  +WG  W+ +T     
Sbjct: 3   VTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLT 62

Query: 214 -SLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 243
              +   TT  G    + +V P GW    +Y
Sbjct: 63  GPFTVRYTTEGGTKTEAEDVIPEGWKADTSY 93

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 94

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  100 bits (251), Expect = 4e-28
 Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 157 IRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQ- 213
           + FT+   S      VL+   G       +   GS   W  M++  G  W  ++    Q 
Sbjct: 4   VTFTVEKGSNEKHLAVLVKYEGDTMAEVELREHGS-DEWVAMTKGEGGVWTFDSEEPLQG 62

Query: 214 SLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 244
             +F   T  G      +V P  ++ G TY+
Sbjct: 63  PFNFRFLTEKGMKNVFDDVVPEKYTIGATYA 93

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	249
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	100.0
d1n10a1	95	PHL P 1 C-terminal domain {Timothy grass (Phleum p	99.95
d1whoa_	94	PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 1	99.92
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.73
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	89.2

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=1.4e-36  Score=246.78  Aligned_cols=125  Identities=34%  Similarity=0.668  Sum_probs=105.9

Q ss_pred             cccCCCCCceEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeE
Q 025740           18 VHANGGGGWINARATFYGGGDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTI   95 (249)
Q Consensus        18 ~~~~~~~~~~~g~aT~Y~~~~~~~~--~~GaCgy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv   95 (249)
                      +.+.|.++|++|+||||+.+++.++  .+|||||++++..|++.++||+|+++|++|..||+||||+|.+ +..|.+++|
T Consensus         9 ~~a~~~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~-~~~c~~~sv   87 (143)
T d1n10a2           9 ITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-PEACSGEPV   87 (143)
T ss_dssp             CCCBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-STTBCSCCE
T ss_pred             cccccCCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCC-CCcccCCCE
Confidence            3456889999999999998776543  4799999998877889999999999999999999999999987 467988899


Q ss_pred             EEEEeCCCCCCCCCCCCCCCCCCCCCCceecCHHHHHHhhhh-------cCCeeeEEEEEeecCCCC
Q 025740           96 MVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQHIAQY-------RAGVVPVAYKRVPCGRRG  155 (249)
Q Consensus        96 ~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~~AF~~ia~~-------~~G~~~i~w~~V~C~~~g  155 (249)
                      +|+|||.||.           |. +.+|||||++||.+||+.       +.|+++|+||||+|+++|
T Consensus        88 ~V~vtd~c~~-----------~~-~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV~C~~~g  142 (143)
T d1n10a2          88 VVHITDDNEE-----------PI-APYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPE  142 (143)
T ss_dssp             EEEEEEECSS-----------CS-SSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCT
T ss_pred             EEEEEecccC-----------CC-CCccccCCHHHHhhhccccchhhheecCccceEEEEEeccCCC
Confidence            9999999996           33 368999999999999984       679999999999999986

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=100.00  E-value=2e-35  Score=246.54  Aligned_cols=135  Identities=23%  Similarity=0.366  Sum_probs=113.5

Q ss_pred             CCceEEEEEEeCCCCCCCCCccccCCCcCCCC-C----CCCeEEEeChhhcCC------CCCCcceEEEEEcCCCC----
Q 025740           24 GGWINARATFYGGGDASGTMGGACGYGNLYSQ-G----YGTNTAALSTALFNN------GLSCGSCYEIKCVNDPK----   88 (249)
Q Consensus        24 ~~~~~g~aT~Y~~~~~~~~~~GaCgy~~~~~~-~----~~~~~aA~s~~~~~~------g~~CG~C~eV~c~~~~~----   88 (249)
                      .+|+.+++|||+..+     +|||||+++... +    ++.++||+|+++|++      |+.||+||||||++++.    
T Consensus        12 ~g~~~A~aT~Ygd~~-----~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~   86 (180)
T d1wc2a1          12 NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (180)
T ss_dssp             TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceEEeCCCC-----CCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccC
Confidence            689999999999764     699999987432 3    457899999999999      89999999999986432    


Q ss_pred             -CcCC-CeEEEEEeCCCCCCCCCCCCCCCCCCCCC-----------CceecCHHHHHHhhhhcCCeeeEEEEEeecCCCC
Q 025740           89 -WCLP-GTIMVTATNFCPPNNALPNNAGGWCNPPQ-----------QHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRG  155 (249)
Q Consensus        89 -~C~~-~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~-----------~~~DLs~~AF~~ia~~~~G~~~i~w~~V~C~~~g  155 (249)
                       .|.. ++|+|||||+||.+    +.|++||+++.           .||||+ .||.+||....|+|+|+||+|+|+..+
T Consensus        87 ~~~~~g~sV~V~iTd~CP~n----~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~~~~G~v~V~yrrV~C~~~g  161 (180)
T d1wc2a1          87 GPVREGLSKTFMITNLCPNI----YPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTGMGWNNPETTWEVVNCDSEH  161 (180)
T ss_dssp             CCCCTTCEEEEEEEEEECSS----TTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGGGTCSSEEEEEEEECHHHHH
T ss_pred             CCCCCCCcEEEEEEecCCCC----CCCCCccCCccccccccccCcccceech-HHHHHHhhhcCCcceeEEEEeeCCCcc
Confidence             2322 39999999999975    34789997643           399997 599999999999999999999999999


Q ss_pred             ceeEEEcCCccce
Q 025740          156 GIRFTINGHSYFN  168 (249)
Q Consensus       156 ni~~~v~s~~~w~  168 (249)
                      ++++++.++++|-
T Consensus       162 ~~~~~~~~n~~~~  174 (180)
T d1wc2a1         162 NHDHRTPSNSMYG  174 (180)
T ss_dssp             HHCTTSCCHHHHT
T ss_pred             cccccccCCcchh
Confidence            9999888888774

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.95  E-value=6.8e-28  Score=182.54  Aligned_cols=89  Identities=29%  Similarity=0.636  Sum_probs=82.5

Q ss_pred             ceeEEEc--CCccceeEEEEeeCCCcceEEEEEEecC-CceeeccCCCCceEEeCCC--CCCcceEEEEEecCCcEEEEc
Q 025740          156 GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTY--LNGQSLSFEVTTSDGRTVTSY  230 (249)
Q Consensus       156 ni~~~v~--s~~~w~av~v~n~~G~~~I~sVei~~~g-~~W~~m~r~~g~~W~~~~~--~~g~p~~vRvT~~~G~~v~~~  230 (249)
                      +|+|+|+  ||+||++|+|+|++|+++|.+|||++.+ ++|++|+|+|||+|+++.+  +++ ||+||||+.+|+++++.
T Consensus         2 ~i~F~v~~gsnp~~lav~v~n~~g~gdI~~vevk~~g~~~W~~m~r~~ga~W~~~~~~~~~g-pls~Rvt~~~G~~~v~~   80 (95)
T d1n10a1           2 KVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAE   80 (95)
T ss_dssp             CCEEEECTTCBTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEE
T ss_pred             cEEEEECCCCCcceEEEEEEEcCCCCcEEEEEEEeCCCCcceEEEECCCCeEEECCCCCCCc-CEEEEEEEcCCCEEEEC
Confidence            6899998  6899999999999999999999999986 6799999999999998654  444 99999999999999999


Q ss_pred             cccCCCCCCCeEEeC
Q 025740          231 NVAPAGWSFGRTYSG  245 (249)
Q Consensus       231 ~vip~~w~~G~~Y~~  245 (249)
                      ||||++|++|.+|++
T Consensus        81 nViP~~W~~G~tY~s   95 (95)
T d1n10a1          81 DVIPEGWKADTSYES   95 (95)
T ss_dssp             EEECSSCCSSEEEEC
T ss_pred             ceECCCCCCCCEEeC
Confidence            999999999999986

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.92  E-value=1.8e-25  Score=168.81  Aligned_cols=87  Identities=23%  Similarity=0.463  Sum_probs=78.9

Q ss_pred             ceeEEEc--CCccceeEEEEeeCCCcceEEEEEEecC-CceeeccCCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025740          156 GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNT--YLNGQSLSFEVTTSDGRTVTSY  230 (249)
Q Consensus       156 ni~~~v~--s~~~w~av~v~n~~G~~~I~sVei~~~g-~~W~~m~r~~g~~W~~~~--~~~g~p~~vRvT~~~G~~v~~~  230 (249)
                      .|+|+|+  ||+|||+|+++|++|  +|.+|||++.+ ++|++|+|+|||+|+++.  ++.+ ||+||||+.+|+++++.
T Consensus         3 ~v~f~v~~GSnp~~lav~v~~~gg--~i~~vev~~~gs~~W~~M~r~wGa~W~~~~~~~~~g-plsfRvt~~~G~~~v~~   79 (94)
T d1whoa_           3 KVTFTVEKGSNEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD   79 (94)
T ss_dssp             SEEEEECTTCBTTEEEEEEEETTC--CEEEEEEECTTCCCCEECEECSTTEEEEECSSCCCS-SEEEEEEETTSCEEEEE
T ss_pred             cEEEEECCCCCccEEEEEEEEcCC--CEEEEEEEECCCCceeECccCcCccEEECCCCCCCc-cEEEEEEEcCCCEEEEc
Confidence            5999998  689999999999984  89999999876 579999999999998765  3454 99999999999999999


Q ss_pred             cccCCCCCCCeEEeC
Q 025740          231 NVAPAGWSFGRTYSG  245 (249)
Q Consensus       231 ~vip~~w~~G~~Y~~  245 (249)
                      ||||++|++|.+|++
T Consensus        80 nViP~~W~~G~ty~~   94 (94)
T d1whoa_          80 DVVPEKYTIGATYAP   94 (94)
T ss_dssp             EEECSSCCTTCEECC
T ss_pred             ceECCCCCCCCEECc
Confidence            999999999999985

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.73  E-value=4.9e-09  Score=79.16  Aligned_cols=62  Identities=26%  Similarity=0.546  Sum_probs=51.5

Q ss_pred             CCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecC-HHHHHHhh----hhcCCeeeE
Q 025740           70 NNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLS-QPVFQHIA----QYRAGVVPV  144 (249)
Q Consensus        70 ~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs-~~AF~~ia----~~~~G~~~i  144 (249)
                      ..-..||+|++|+...+     +.+++++|||+|..                +.|||. +..|++|-    ....|.+.|
T Consensus        58 ~gq~sCGkclrvTN~at-----ga~~~~RiVDqCsn----------------gGlDLD~~~vFn~iDtdG~G~~~Ghl~V  116 (125)
T d1bw3a_          58 RGQAACGKCLRVTNPAT-----GAQITARIVDQCAN----------------GGLDLDWDTVFTKIDTNGIGYQQGHLNV  116 (125)
T ss_dssp             CSGGGTTCEEEEEETTT-----TEEEEEEEEECCSS----------------SSCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred             cCcccccceEEeeeccc-----CcEEEEEEeecccC----------------CCCccccHhhhheecCCCcccccccEEE
Confidence            44578999999998764     24999999999754                679999 78999995    346789999


Q ss_pred             EEEEeecC
Q 025740          145 AYKRVPCG  152 (249)
Q Consensus       145 ~w~~V~C~  152 (249)
                      .|++|.|.
T Consensus       117 ~y~fV~C~  124 (125)
T d1bw3a_         117 NYQFVDCR  124 (125)
T ss_dssp             EEEEECCC
T ss_pred             EEEEecCC
Confidence            99999995

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=89.20  E-value=0.1  Score=42.23  Aligned_cols=53  Identities=30%  Similarity=0.374  Sum_probs=34.2

Q ss_pred             EEEeChhhcCCCCCCcceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCceecCH
Q 025740           61 TAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQ  128 (249)
Q Consensus        61 ~aA~s~~~~~~g~~CG~C~eV~c~~~~~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLs~  128 (249)
                      +||.+-.-...+..|.+|||++=++.+  -..++.+|+||+.=-+             -..+||||..
T Consensus        72 fAA~~~~g~~e~~~Cc~Cy~LtFTs~~--~~GKkMiVQ~tNTGgD-------------lg~n~FDl~i  124 (210)
T d2enga_          72 FAATSIAGSNEAGWCCACYELTFTSGP--VAGKKMVVQSTSTGGD-------------LGSNHFDLNI  124 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGG--GTTCEEEEEEEEC------------------CCEEEEEC
T ss_pred             eeeeeecCCCccccccccEEEEeecCC--cCCCEEEEEEeccCCc-------------cCCCeeeEec
Confidence            566654333334679999999988643  2245999999986322             1268999975