BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025746
MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV
LTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET
RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ
TIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQSKTQLHLLQ
RPFLANHL

High Scoring Gene Products

Symbol, full name Information P value
O99019
Light-induced protein, chloroplastic
protein from Solanum demissum 1.2e-67
P80471
Light-induced protein, chloroplastic
protein from Solanum tuberosum 1.9e-67
AT4G22240 protein from Arabidopsis thaliana 8.4e-58
FIB
AT4G04020
protein from Arabidopsis thaliana 2.2e-57
AT2G35490 protein from Arabidopsis thaliana 1.5e-33
AT5G09820 protein from Arabidopsis thaliana 1.3e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025746
        (248 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|O99019 - symbol:O99019 "Light-induced protein, ...   687  1.2e-67   1
UNIPROTKB|P80471 - symbol:P80471 "Light-induced protein, ...   685  1.9e-67   1
TAIR|locus:2132006 - symbol:AT4G22240 species:3702 "Arabi...   594  8.4e-58   1
TAIR|locus:2136627 - symbol:FIB "fibrillin" species:3702 ...   590  2.2e-57   1
TAIR|locus:2062497 - symbol:AT2G35490 species:3702 "Arabi...   365  1.5e-33   1
TAIR|locus:2178133 - symbol:AT5G09820 species:3702 "Arabi...   131  1.3e-06   1


>UNIPROTKB|O99019 [details] [associations]
            symbol:O99019 "Light-induced protein, chloroplastic"
            species:50514 "Solanum demissum" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0006950 "response to stress" evidence=IEP]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=ISS]
            InterPro:IPR006843 Pfam:PF04755 GO:GO:0006950 GO:GO:0005198
            GO:GO:0009535 EMBL:AJ131455 Uniprot:O99019
        Length = 326

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 147/234 (62%), Positives = 166/234 (70%)

Query:     1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
             MASIS  NQ PCKTL     +++ TSK S LP++S        +   +S++ FT  +P  
Sbjct:     1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60

Query:    61 LTRAAXXXXXXX---XXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
               +A                            PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct:    61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query:   118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
             SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct:   121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query:   178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
             ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ
Sbjct:   181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 234


>UNIPROTKB|P80471 [details] [associations]
            symbol:P80471 "Light-induced protein, chloroplastic"
            species:4113 "Solanum tuberosum" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0006950 "response to stress" evidence=IEP]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            InterPro:IPR006843 Pfam:PF04755 GO:GO:0006950 GO:GO:0005198
            GO:GO:0009535 EMBL:Y15269 PIR:T07825 Uniprot:P80471
        Length = 326

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 147/234 (62%), Positives = 165/234 (70%)

Query:     1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
             MASIS  NQ PCKTL     +++ TSK S LP++S            +S++ FT  +P  
Sbjct:     1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60

Query:    61 LTRAAXXXXXXX---XXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
               +A                            PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct:    61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query:   118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
             SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct:   121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query:   178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
             ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ
Sbjct:   181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 234


>TAIR|locus:2132006 [details] [associations]
            symbol:AT4G22240 species:3702 "Arabidopsis thaliana"
            [GO:0005198 "structural molecule activity" evidence=IEA;ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IEA;IDA] [GO:0031977 "thylakoid lumen"
            evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0010287
            "plastoglobule" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
            evidence=IDA] InterPro:IPR006843 Pfam:PF04755 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0005198 EMBL:AL161556 EMBL:AL021712
            GO:GO:0009535 GO:GO:0010287 GO:GO:0031977 eggNOG:NOG08027
            HOGENOM:HOG000030253 ProtClustDB:CLSN2719212 EMBL:AY074581
            EMBL:AY084549 EMBL:BT020429 EMBL:BT020480 IPI:IPI00536675
            PIR:T04905 RefSeq:NP_193955.1 UniGene:At.1973 IntAct:O49629
            STRING:O49629 PaxDb:O49629 PRIDE:O49629 ProMEX:O49629
            EnsemblPlants:AT4G22240.1 GeneID:828319 KEGG:ath:AT4G22240
            GeneFarm:2281 TAIR:At4g22240 InParanoid:O49629 OMA:AKLYNIA
            Genevestigator:O49629 GermOnline:AT4G22240 Uniprot:O49629
        Length = 310

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 128/232 (55%), Positives = 159/232 (68%)

Query:     1 MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPL 59
             MA++  + QF C+T     P+++  SKP  L P+ S+ I R +     +++      R +
Sbjct:     1 MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRV 55

Query:    60 VLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSE 119
                RA                          ++V E + LK++LVDS YGTDRGL+A+SE
Sbjct:    56 FKVRATDTGEIGSALLAAEEAI---------EDVEETERLKRSLVDSLYGTDRGLSASSE 106

Query:   120 TRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEIS 179
             TRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF  LFPLLSRG +PL +V+EIS
Sbjct:   107 TRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEIS 166

Query:   180 QTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
             QTIDS+NFTVQNS+RFAGPL T SISTNAKFE+RSPKRVQIKFE+G+IGTPQ
Sbjct:   167 QTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQ 218


>TAIR|locus:2136627 [details] [associations]
            symbol:FIB "fibrillin" species:3702 "Arabidopsis
            thaliana" [GO:0005198 "structural molecule activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IEA;IDA]
            [GO:0031977 "thylakoid lumen" evidence=IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0010287 "plastoglobule"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
            [GO:0010205 "photoinhibition" evidence=IMP] [GO:0009409 "response
            to cold" evidence=IEP] [GO:0010319 "stromule" evidence=IDA]
            [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            InterPro:IPR006843 Pfam:PF04755 GO:GO:0009737 GO:GO:0005634
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005198 GO:GO:0009409
            GO:GO:0010205 GO:GO:0009535 GO:GO:0010287 GO:GO:0031977
            GO:GO:0010319 EMBL:AF075598 EMBL:AL161499 EMBL:AY120766
            EMBL:BT000148 EMBL:AY085330 IPI:IPI00548131 PIR:T01472
            RefSeq:NP_192311.1 UniGene:At.27543 IntAct:O81439 STRING:O81439
            PaxDb:O81439 PRIDE:O81439 ProMEX:O81439 EnsemblPlants:AT4G04020.1
            GeneID:825714 KEGG:ath:AT4G04020 GeneFarm:2632 TAIR:At4g04020
            eggNOG:NOG08027 HOGENOM:HOG000030253 InParanoid:O81439 OMA:NRRSEIG
            ProtClustDB:CLSN2719212 Genevestigator:O81439 GermOnline:AT4G04020
            Uniprot:O81439
        Length = 318

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 128/235 (54%), Positives = 158/235 (67%)

Query:     1 MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPL 59
             MA++    QFPCKTL+ +  + +  SK P +LP+NS+       ++S +   G +  RP 
Sbjct:     1 MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSIN------RRSEI---GVSVHRPD 51

Query:    60 VLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPK---EVTEIDNLKKALVDSFYGTDRGLNA 116
                RA                        + K    V E + LK++L DS YGTDRGL+ 
Sbjct:    52 FKIRATDIDDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSV 111

Query:   117 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE 176
             +S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF GLFPLLSR   PL +V+
Sbjct:   112 SSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVD 171

Query:   177 EISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
             EISQTIDS++FTVQNS+RFAGP +TTS STNAKFE+RSPKRVQIKFE+G+IGTPQ
Sbjct:   172 EISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQ 226


>TAIR|locus:2062497 [details] [associations]
            symbol:AT2G35490 species:3702 "Arabidopsis thaliana"
            [GO:0005198 "structural molecule activity" evidence=IEA;ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IEA;IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009534
            "chloroplast thylakoid" evidence=IDA] [GO:0009536 "plastid"
            evidence=IDA] InterPro:IPR006843 Pfam:PF04755 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0005198 GO:GO:0009535 GO:GO:0010287
            EMBL:AC005314 HOGENOM:HOG000030253 EMBL:AY042905 EMBL:AY081449
            EMBL:AY087815 IPI:IPI00543558 PIR:C84769 RefSeq:NP_181092.1
            UniGene:At.13014 STRING:O82291 PaxDb:O82291 PRIDE:O82291
            ProMEX:O82291 EnsemblPlants:AT2G35490.1 GeneID:818114
            KEGG:ath:AT2G35490 GeneFarm:2633 TAIR:At2g35490 eggNOG:NOG326380
            InParanoid:O82291 OMA:PRNDDEW PhylomeDB:O82291
            ProtClustDB:CLSN2683792 Genevestigator:O82291 GermOnline:AT2G35490
            Uniprot:O82291
        Length = 376

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 70/140 (50%), Positives = 94/140 (67%)

Query:    99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 158
             LK+ L DS YGT+ G  A SE RAE++EL+ QLEA NPTPAP E   LL+  W+L+YT+F
Sbjct:   153 LKRCLADSVYGTELGFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAF 212

Query:   159 SGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRV 218
             S L PLL+ G+ PL +V+ ISQ+ID+ N  + NS   + P A  S S  A FEVRSP R+
Sbjct:   213 SELIPLLAAGSTPLLKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRI 272

Query:   219 QIKFEEGIIGTPQSKTQLHL 238
             ++ F+EG +  P  K+ + L
Sbjct:   273 EVSFKEGTLKPPVIKSSVDL 292


>TAIR|locus:2178133 [details] [associations]
            symbol:AT5G09820 species:3702 "Arabidopsis thaliana"
            [GO:0005198 "structural molecule activity" evidence=IEA;ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IEA;IDA] InterPro:IPR006843 Pfam:PF04755
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0005198
            EMBL:AB016893 HOGENOM:HOG000240350 EMBL:BT020393 EMBL:AK228700
            IPI:IPI00656776 RefSeq:NP_001031862.1 UniGene:At.32452
            STRING:Q5M755 PaxDb:Q5M755 PRIDE:Q5M755 EnsemblPlants:AT5G09820.2
            GeneID:830842 KEGG:ath:AT5G09820 GeneFarm:2855 TAIR:At5g09820
            eggNOG:NOG121263 InParanoid:Q5M755 OMA:EGWLEIT
            ProtClustDB:CLSN2681039 Genevestigator:Q5M755 Uniprot:Q5M755
        Length = 273

 Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 39/146 (26%), Positives = 70/146 (47%)

Query:    91 KEVTEIDNLKKALVDSFYGTDRGL-NATSETRAEIVELITQLEAKNPTPAPTEALTLLNA 149
             +E+T + ++K+ L ++  G +RG+    S+ + EI  L+  LE +NPTP PT  L  +  
Sbjct:    79 EEIT-VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGG 137

Query:   150 KWILVYTSFSGLFPLLSR-GTLPLARVEEISQTIDSENFTVQNSIRF--AG-PLATTSIS 205
              W L+Y++ + L    ++ G      + ++ Q ID       + ++F   G  L      
Sbjct:   138 CWKLIYSTITVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFR 197

Query:   206 TNAKFEVRSPKRVQIKFEEGIIGTPQ 231
               A F++ S   V+I +E   I   Q
Sbjct:   198 IVASFKISSKSSVEITYESSTIKPDQ 223


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.359    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      248       225   0.00077  113 3  11 22  0.41    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  577 (61 KB)
  Total size of DFA:  142 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.14u 0.13s 18.27t   Elapsed:  00:00:00
  Total cpu time:  18.14u 0.13s 18.27t   Elapsed:  00:00:00
  Start:  Sat May 11 01:01:42 2013   End:  Sat May 11 01:01:42 2013

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