BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025746
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/238 (96%), Positives = 232/238 (97%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV
Sbjct: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
Query: 61 LTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120
LTRAADDDEWGPEKEKE GGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET
Sbjct: 61 LTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120
Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180
RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180
Query: 181 TIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQSKTQLHL 238
TIDSENFTVQNSI+FAGPLATTSISTNAKFEVRSPKRVQIKFEEG+IGTPQ L L
Sbjct: 181 TIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVL 238
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/237 (66%), Positives = 185/237 (78%), Gaps = 13/237 (5%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPL 59
MA +SQ NQ PCKTL+ NPP Q TSKPS+ P+ S+ +R+ A KS +S+ RP
Sbjct: 1 MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISV------RPA 54
Query: 60 VLTRAA-DDDEWGPEKEKEEGG----ALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGL 114
RA +DDEWG +K+++ G A+A EEE P E +EI LKKALVDSFYGTDRGL
Sbjct: 55 FKVRAVLNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGL 114
Query: 115 NATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLAR 174
+ +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL YT+F+GLFPLLSR LPL +
Sbjct: 115 RVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVK 173
Query: 175 VEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
VEEISQTIDSEN TVQNS++F+GPLATTSI+TNAKFEVRSP RV IKFEEG+IGTPQ
Sbjct: 174 VEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQ 230
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 289 bits (740), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/234 (68%), Positives = 183/234 (78%), Gaps = 3/234 (1%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASIS NQ PCKTL +++ TSK S LP++S + +S++ FT +P
Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60
Query: 61 LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
+A + +DEWGPE E+ G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180
Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 234
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 288 bits (737), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/234 (68%), Positives = 182/234 (77%), Gaps = 3/234 (1%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASIS NQ PCKTL +++ TSK S LP++S +S++ FT +P
Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60
Query: 61 LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
+A + +DEWGPE E+ G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180
Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 234
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/234 (60%), Positives = 176/234 (75%), Gaps = 10/234 (4%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKP--SILPLNSVRISRSLAKKSFLSIQGFTRARP 58
MA++ NQFPCKT Q+ +++ SKP S++P+++ L ++ F +R
Sbjct: 1 MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSA------LTRRPSFPPGEFAVSRS 54
Query: 59 LVLTRAAD-DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
R D +DE PE + G AL +AEE + + V E + LK++LVDS YGTDRGL+A+
Sbjct: 55 DFRVRVIDAEDELDPETSEGGGSALLMAEE-AIESVEETEVLKRSLVDSLYGTDRGLSAS 113
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
SETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL YTSF GLFPLLSRG +PL +V+E
Sbjct: 114 SETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDE 173
Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
ISQTIDS+NFTV+NS+ FAGPLATTSISTNAKFE+RSPKRVQIKFEEG+IGTPQ
Sbjct: 174 ISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQ 227
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 252 bits (643), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 172/236 (72%), Gaps = 15/236 (6%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPL 59
MA++ QFPCKTL+ + + + SK P +LP+NS+ ++S + G + RP
Sbjct: 1 MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSIN------RRSEI---GVSVHRPD 51
Query: 60 VLTRAAD-DDEWGP---EKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLN 115
RA D DDEWG E+ ++VA++ + + V E + LK++L DS YGTDRGL+
Sbjct: 52 FKIRATDIDDEWGQDGVERVFASSSTVSVADK-AIESVEETERLKRSLADSLYGTDRGLS 110
Query: 116 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 175
+S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF GLFPLLSR PL +V
Sbjct: 111 VSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKV 170
Query: 176 EEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
+EISQTIDS++FTVQNS+RFAGP +TTS STNAKFE+RSPKRVQIKFE+G+IGTPQ
Sbjct: 171 DEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQ 226
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/232 (57%), Positives = 168/232 (72%), Gaps = 15/232 (6%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPL 59
MA++ + QF C+T P+++ SKP L P+ S+ I R + +++ R +
Sbjct: 1 MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRV 55
Query: 60 VLTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSE 119
RA D E G + +A EE+ ++V E + LK++LVDS YGTDRGL+A+SE
Sbjct: 56 FKVRATDTGEIG---------SALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSE 106
Query: 120 TRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEIS 179
TRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF LFPLLSRG +PL +V+EIS
Sbjct: 107 TRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEIS 166
Query: 180 QTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
QTIDS+NFTVQNS+RFAGPL T SISTNAKFE+RSPKRVQIKFE+G+IGTPQ
Sbjct: 167 QTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQ 218
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 226 bits (575), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/236 (55%), Positives = 162/236 (68%), Gaps = 21/236 (8%)
Query: 8 NQFPCKT-LSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRAR-------PL 59
+QF CKT ++ + + + P +LP+N + ++ + F RA P
Sbjct: 9 SQFTCKTPITSSSTSSFQSKSPILLPINPINRRIAVHRHDFK-----VRASDVNDEWGPD 63
Query: 60 VLTRAAD-DDEWGPEKEKEEGGALAVAEE---ESPKEVTEIDNLKKALVDSFYGTDRGLN 115
R D DDEWGPE G +VAE+ E+ + E + LK+ L S YGTDRGL+
Sbjct: 64 SKGRGGDVDDEWGPEI----GLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLS 119
Query: 116 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 175
A+SETRAEI ELITQLE+KNP PAP EAL LLN KWILVYTSF GLFPLLSR PL +V
Sbjct: 120 ASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKV 179
Query: 176 EEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
+EISQTIDS++FTV NS+RFA PLATTS+STNAKFEVRSPKRVQ+KFE+G+IGTPQ
Sbjct: 180 DEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQ 235
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 225 bits (574), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/219 (61%), Positives = 154/219 (70%), Gaps = 16/219 (7%)
Query: 25 TSKPSILPLNSVRISRSLAKKSFLSIQGF-----TRARPLVLTRAA----DDDEWGPEKE 75
T PS P+ S R L + L G RA P LT A +DEWG E
Sbjct: 14 TQSPSPSPVASAR----LVAPAVLGFAGAPRFPTLRAAPRRLTARAVAGDAEDEWGKEPA 69
Query: 76 KEEGGALAVAEEESPKE--VTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEA 133
++GGA A E +E+ LK L ++ YGT+RGL A+SETRAE+VELITQLEA
Sbjct: 70 ADQGGAAAAVAEAPADVPVTSEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEA 129
Query: 134 KNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLP-LARVEEISQTIDSENFTVQNS 192
+NPTPAPTEALTLLN KWIL YTSFS LFPLL G+LP L +VEEISQTIDSENFTVQN
Sbjct: 130 RNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNC 189
Query: 193 IRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 231
I+F+GPLATTS+STNAKFEVRSPKRVQIKF+EGIIGTPQ
Sbjct: 190 IKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGIIGTPQ 228
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 108/177 (61%), Gaps = 12/177 (6%)
Query: 66 DDDEWGPE----KEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETR 121
++DEWG E E + G AV++ LK+ L DS YGT+ G A SE R
Sbjct: 124 NEDEWGGEIGGETEADAGNGSAVSDPTW--------ELKRCLADSVYGTELGFKAGSEVR 175
Query: 122 AEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQT 181
AE++EL+ QLEA NPTPAP E LL+ W+L+YT+FS L PLL+ G+ PL +V+ ISQ+
Sbjct: 176 AEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQS 235
Query: 182 IDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQSKTQLHL 238
ID+ N + NS + P A S S A FEVRSP R+++ F+EG + P K+ + L
Sbjct: 236 IDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDL 292
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 144 bits (362), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 113/188 (60%), Gaps = 13/188 (6%)
Query: 64 AADDDEWGPEKEK-EEGGALAVAEEESPK-----EVTEIDN-------LKKALVDSFYGT 110
+A DEWG + E E AE + P E E D+ LK+ L D+ YGT
Sbjct: 89 SAVSDEWGEKSESVPEESVTRFAESDPPTNEDEWEEREADDGVDKTWELKRCLADTVYGT 148
Query: 111 DRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTL 170
+ G A SE RAE++E++ QLEA NPT AP E LL+ W+L+YT+FS L PLL+ G+
Sbjct: 149 ELGFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAFSELLPLLAAGST 208
Query: 171 PLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 230
PL +V+ ISQ+ID+++ ++ NS + P A S S A FEVR+P R+++ F+EG + P
Sbjct: 209 PLLKVKSISQSIDTKSLSIDNSTTLSSPFADFSFSATASFEVRTPSRIEVSFKEGTLKPP 268
Query: 231 QSKTQLHL 238
+ K+ + L
Sbjct: 269 EIKSSVDL 276
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 104/143 (72%)
Query: 96 IDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY 155
++ LK++LVD+ YGT+ G A SE RAE+ E + QLEA NPTPAP E LLN W+L+Y
Sbjct: 132 LEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLY 191
Query: 156 TSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSP 215
T+ S L PLL+ G+LPL ++++ISQTID+++FTV NS + P A+ S S +A FEVRSP
Sbjct: 192 TASSELLPLLAAGSLPLLKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSP 251
Query: 216 KRVQIKFEEGIIGTPQSKTQLHL 238
R+Q+ F+EG + P+ K+++ L
Sbjct: 252 TRIQVTFKEGSLQPPEIKSKIDL 274
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 7/181 (3%)
Query: 62 TRAAD----DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
T AAD DDEWG + E E + LK+ LVD+ YG+D G A+
Sbjct: 111 TSAADPPTNDDEWGGDPAPP---PPPPPVPEEDNEEERREELKRCLVDTVYGSDLGFRAS 167
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 177
SE R E++EL+TQLEA NPTP P +A LL WIL+YT++S L P+L+ G PL +V+E
Sbjct: 168 SEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELLPILAVGAAPLFKVDE 227
Query: 178 ISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQSKTQLH 237
ISQ ID+ + T+ N+ + P A+ S S A F+V+SP R++++F+EG P+ + +
Sbjct: 228 ISQEIDTNSMTIVNASTISSPFASFSFSATASFDVQSPSRIEVQFKEGSFQPPKISSSVD 287
Query: 238 L 238
L
Sbjct: 288 L 288
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 96 IDNLKKALVDSFYGTDRGL-NATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 154
+ ++K+ L ++ G +RG+ S+ + EI L+ LE +NPTP PT L + W L+
Sbjct: 83 VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLI 142
Query: 155 YTSFSGLFPLLSR-GTLPLARVEEISQTIDSENFTVQNSIRF---AGPLATTSISTNAKF 210
Y++ + L ++ G + ++ Q ID + ++F L A F
Sbjct: 143 YSTITVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFRIVASF 202
Query: 211 EVRSPKRVQIKFEEGII 227
++ S V+I +E I
Sbjct: 203 KISSKSSVEITYESSTI 219
>sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic
OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1
Length = 284
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 82 LAVAEEESPKEVT-----EIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNP 136
+AVA E+ V ++++ K L+ + T RGL ATS+ R+ I E + +E N
Sbjct: 41 VAVASGETSARVVVDNELDLEHKKHDLLRAVQDTQRGLTATSDQRSIIEEALVTVEGFNG 100
Query: 137 TPA--PTEALTLLNAKWILVYTSFSGLFPLLSRGT-LPLARVEEISQTID----SENFTV 189
P + L+ W L YTS + L + LP +V ++ Q + S+ +
Sbjct: 101 GEEIDPVK----LDGTWRLQYTSAPDVVVLFEAASRLPFFQVGQVFQKFECRDRSDGGII 156
Query: 190 QNSIRFAGP-----LATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQSKTQLHLLQRP 242
+N ++++ P ++ AKF+ S + + ++FEE + QL L P
Sbjct: 157 RNVVQWSLPSLLEEQEGATLVVTAKFDKVSSRNIYLQFEEISVRNININEQLQALIAP 214
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTS 157
LK+ L+++ +RG A+ + + I +L ++EA NPT P ++ L+N KW L+YT+
Sbjct: 74 LKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKEPLKS-DLVNGKWELIYTT 131
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 158
LK LV++ +RG A+ + + I +L ++EA NPT P ++ L+N KW L+YT+
Sbjct: 65 LKHELVEAIEPLERGATASPDDQLLIDQLARKVEAVNPTKEPLKS-DLINGKWELIYTTS 123
Query: 159 SGLF 162
+ +
Sbjct: 124 AAIL 127
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Query: 109 GTDRGLNATSET--RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYT------SFSG 160
G +RGL A+ + RAE+ +LE T+ L L KW L+Y+ S G
Sbjct: 97 GLNRGLVASVDDLERAEVAA--KELETAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGG 154
Query: 161 LFPLLSRGTLPLARVEEISQTID--SENFTVQNSIRFAGPLATTSISTNA----KFEVRS 214
P L G L + ++ Q ID S++F + P + A KFE+
Sbjct: 155 SRPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFELLG 214
Query: 215 PKRVQIKFEEGIIGTPQSKTQLHLLQRPFLANHL 248
+++I FE+ + T + +Q+ P L +
Sbjct: 215 TCKIKITFEKTTVKTSGNLSQIPPFDIPRLPDSF 248
>sp|Q9YAC2|ATGT_AERPE tRNA-guanine(15) transglycosylase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=tgtA PE=3 SV=1
Length = 512
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 135 NPTPAPTEALTLLNA-KWILVYTSFSGLFPLLSRGTLP 171
+P P P + +++ +WIL Y F G+FP+ + G P
Sbjct: 405 DPKPEPGQCESMVGGGEWILFYQPFLGVFPVEACGAYP 442
>sp|Q0H8X8|AI2_USTMA Probable intron-encoded endonuclease aI2 OS=Ustilago maydis (strain
521 / FGSC 9021) GN=aI2 PE=3 SV=2
Length = 533
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 132 EAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTID 183
N + +A++++ W++ +T G F ++ +G L L EISQ +D
Sbjct: 391 NVNNQVTSILDAMSVMTKSWLIGFTEAEGSFYIVKKGPLRLVHAFEISQKLD 442
>sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic
OS=Arabidopsis thaliana GN=PAP13 PE=1 SV=2
Length = 299
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 117 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY--TSFSGLFP---LLSRGTLP 171
T+ R ++ E IT LE NPTP PT + +W + + GL + R
Sbjct: 94 TNMQRIDVNERITSLERLNPTPRPTTS-PCFEGRWNFEWFGSGSPGLLAARVIFERFPST 152
Query: 172 LARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 230
LA + + I N +I+ + + I ++K V P R++ ++ EG++ TP
Sbjct: 153 LANLSRMEILIKDANAKATANIKLLNSIE-SKIILSSKLTVEGPLRLKEEYVEGMLETP 210
>sp|Q9SD67|FTSH7_ARATH ATP-dependent zinc metalloprotease FTSH 7, chloroplastic
OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 12 CKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDE 69
C+ QNP N+F S LPL +++ + F GF+R + ++ +DD+
Sbjct: 37 CRVYRQNP--NRFVSNSITLPLQKKQVTVLRNHERFNLWDGFSRKKSRLVVNCQEDDQ 92
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,006,828
Number of Sequences: 539616
Number of extensions: 3340965
Number of successful extensions: 8288
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 8238
Number of HSP's gapped (non-prelim): 50
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)