Query 025746
Match_columns 248
No_of_seqs 142 out of 343
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 09:05:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025746.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025746hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04755 PAP_fibrillin: PAP_fi 100.0 6.8E-31 1.5E-35 225.0 17.2 136 97-232 1-137 (198)
2 PF14869 DUF4488: Domain of un 79.0 24 0.00053 29.7 9.4 77 147-234 3-80 (133)
3 TIGR02116 toxin_Txe_YoeB toxin 60.4 22 0.00048 26.3 4.8 20 118-138 17-36 (80)
4 PF07240 Turandot: Stress-indu 32.1 1.6E+02 0.0035 22.9 5.7 56 93-151 5-60 (85)
5 PF06251 Caps_synth_GfcC: Caps 31.5 44 0.00096 29.6 2.9 67 93-162 52-131 (229)
6 PF05973 Gp49: Phage derived p 30.3 1.7E+02 0.0036 21.8 5.5 43 117-160 7-51 (91)
7 PF07624 PSD2: Protein of unkn 30.0 78 0.0017 23.4 3.6 39 97-135 21-59 (76)
8 PF05015 Plasmid_killer: Plasm 28.3 2E+02 0.0043 22.0 5.7 31 104-134 10-40 (93)
9 TIGR03067 Planc_TIGR03067 Plan 27.1 1.4E+02 0.0031 23.5 4.8 17 144-160 4-20 (107)
10 PF14834 GST_C_4: Glutathione 26.8 90 0.002 25.8 3.6 40 109-153 33-72 (117)
11 PF12283 Protein_K: Bacterioph 26.2 1.8E+02 0.004 20.7 4.6 36 96-134 5-41 (56)
12 COG3880 Modulator of heat shoc 21.3 1.5E+02 0.0032 26.2 4.1 42 92-139 134-175 (176)
13 cd03715 RT_ZFREV_like RT_ZFREV 20.5 1.9E+02 0.0042 24.7 4.8 45 112-156 5-57 (210)
14 PF10047 DUF2281: Protein of u 20.2 2.2E+02 0.0049 20.5 4.3 47 100-154 2-48 (66)
No 1
>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle. The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast
Probab=99.97 E-value=6.8e-31 Score=225.03 Aligned_cols=136 Identities=46% Similarity=0.757 Sum_probs=126.9
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccccccCcEEEEEEeccCCcccccccCCCCceeec
Q 025746 97 DNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE 176 (248)
Q Consensus 97 ~~lK~~LL~av~~t~RG~~as~e~r~eI~elI~qLEalNPtp~P~~sl~lL~G~W~L~YTS~~~~l~ll~~g~lP~v~vG 176 (248)
+++|++||+++++++||+.+++++|++|+++|++||++||+++|+++.++|+|+|+|+|||+.+..+.+..+..+++.+|
T Consensus 1 ~~~K~~Ll~~~~~~~rG~~~~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~~~~~~l~~~~~~~~~~~ 80 (198)
T PF04755_consen 1 QDLKQELLQAVAGTNRGLRASPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSPEIRSLLQRGRLPGVRVG 80 (198)
T ss_pred ChHHHHHHHHHhccCCCccCCHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCCCcccccccccccccccc
Confidence 47999999999999999999999999999999999999999999986699999999999999998766656677889999
Q ss_pred ceEEEEeCCCceEEEEEEeec-CceeEEEEEEEEEEEeCCCeEEEEEEeeEEcCCcc
Q 025746 177 EISQTIDSENFTVQNSIRFAG-PLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQS 232 (248)
Q Consensus 177 ~I~Q~ID~~~~~v~NvV~f~~-Pl~~gsv~v~Asfev~s~~Rv~V~Fe~a~I~~p~l 232 (248)
++||+||.+++++.|+|+|.. |++.+.+.+.++|++.+++|+.++|+++.++++.+
T Consensus 81 ~v~Q~id~~~~~~~N~v~~~~~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~ 137 (198)
T PF04755_consen 81 RVFQTIDADNGRVENVVELSGFPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSL 137 (198)
T ss_pred ceEEEEECCCceEEEEEEEeccCceEEEEEEEEEEEEccccEEEEEEEeeEEcccce
Confidence 999999999999999999987 77889999999999999999999999999988665
No 2
>PF14869 DUF4488: Domain of unknown function (DUF4488)
Probab=79.05 E-value=24 Score=29.67 Aligned_cols=77 Identities=19% Similarity=0.235 Sum_probs=51.3
Q ss_pred cCcEEEEE-EeccCCcccccccCCCCceeecceEEEEeCCCceEEEEEEeecCceeEEEEEEEEEEEeCCCeEEEEEEee
Q 025746 147 LNAKWILV-YTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKFEVRSPKRVQIKFEEG 225 (248)
Q Consensus 147 L~G~W~L~-YTS~~~~l~ll~~g~lP~v~vG~I~Q~ID~~~~~v~NvV~f~~Pl~~gsv~v~Asfev~s~~Rv~V~Fe~a 225 (248)
|.|.|+|. |-+...-.+ +. +..+.++-.|. +++++.|..-+.+ ....++..+.++..++....-.-++
T Consensus 3 l~GVWQ~c~~~~~~~~~~----g~---l~~~~~lKilS-~Dgtf~Ni~~~~~--~~aiIt~~GtY~~~sD~~Y~E~IeK- 71 (133)
T PF14869_consen 3 LQGVWQLCHYVSESPEVP----GK---LKPSNVLKILS-DDGTFVNITMIPK--SGAIITGYGTYEQPSDNIYVESIEK- 71 (133)
T ss_pred ceEEEEEEEEeecCcccC----ce---EeecccEEEEc-CCCcEEEEEEeCC--CCcEEEEeEEEEEcCCccceeeecc-
Confidence 78999999 555544322 11 23335566664 5679999998543 3566788899999998766656565
Q ss_pred EEcCCcccc
Q 025746 226 IIGTPQSKT 234 (248)
Q Consensus 226 ~I~~p~l~~ 234 (248)
.+.+|.+.+
T Consensus 72 nv~lp~~~g 80 (133)
T PF14869_consen 72 NVHLPFLDG 80 (133)
T ss_pred eecCcccCC
Confidence 777766544
No 3
>TIGR02116 toxin_Txe_YoeB toxin-antitoxin system, toxin component, Txe/YoeB family. The Axe-Txe pair in Enterococcus faecium and the homologous YefM-YoeB pair in Escherichia coli have been shown to act as an antitoxin-toxin pair. This model describes the toxin component. Nearly every example found is next to an identifiable antitoxin, as indicated by matches to TIGR01552 and/or pfam02604.
Probab=60.43 E-value=22 Score=26.28 Aligned_cols=20 Identities=25% Similarity=0.497 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCC
Q 025746 118 SETRAEIVELITQLEAKNPTP 138 (248)
Q Consensus 118 ~e~r~eI~elI~qLEalNPtp 138 (248)
++.+..|.+.|.+|+ .||.+
T Consensus 17 ~~~~~~i~~~i~~l~-~~P~~ 36 (80)
T TIGR02116 17 KKLKKKINELIKDVR-RDPFK 36 (80)
T ss_pred HHHHHHHHHHHHHHH-cCCCC
Confidence 567889999999887 46664
No 4
>PF07240 Turandot: Stress-inducible humoral factor Turandot; InterPro: IPR010825 This family consists of several Drosophila species specific Turandot proteins. The Turandot A (TotA) gene encodes a humoral factor, which is secreted from the fat body and accumulates in the body fluids. TotA is strongly induced upon bacterial challenge, as well as by other types of stress such as high temperature, mechanical pressure, dehydration, UV irradiation, and oxidative agents. It is also upregulated during metamorphosis and at high age. Flies that overexpress TotA show prolonged survival and retain normal activity at otherwise lethal temperatures. Although TotA is only induced by severe stress, it responds to a much wider range of stimuli than heat shock genes such as hsp70 or immune genes such as Cecropin A1 [].
Probab=32.07 E-value=1.6e+02 Score=22.94 Aligned_cols=56 Identities=14% Similarity=0.167 Sum_probs=40.7
Q ss_pred hhhHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccccccCcEE
Q 025746 93 VTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKW 151 (248)
Q Consensus 93 ~~~~~~lK~~LL~av~~t~RG~~as~e~r~eI~elI~qLEalNPtp~P~~sl~lL~G~W 151 (248)
+..-..--++|++.-.....-+..++++|+.++++|.+-+..|- -.+..+.--|.|
T Consensus 5 ~~tK~rni~eLi~fY~ky~~~~~L~~~~r~~~d~~i~~y~~~~~---lVDGvPaQGG~~ 60 (85)
T PF07240_consen 5 DATKIRNIQELIAFYEKYSPRLPLTPQDRQRIDRFIRRYKEENN---LVDGVPAQGGFW 60 (85)
T ss_pred HHHHHhhHHHHHHHHHHcCccCCCCHHHHHHHHHHHHHHHHHhh---cccCcCCCCCch
Confidence 34444555677777766666677899999999999999999984 345555555666
No 5
>PF06251 Caps_synth_GfcC: Capsule biosynthesis GfcC; InterPro: IPR010425 This entry represents uncharacterised bacterial proteins that contain a central beta-grasp like domain related to the SLBB domain [].; PDB: 3P42_B.
Probab=31.53 E-value=44 Score=29.58 Aligned_cols=67 Identities=22% Similarity=0.232 Sum_probs=40.0
Q ss_pred hhhHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHhCCCC-------------CCCccccccCcEEEEEEeccC
Q 025746 93 VTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTP-------------APTEALTLLNAKWILVYTSFS 159 (248)
Q Consensus 93 ~~~~~~lK~~LL~av~~t~RG~~as~e~r~eI~elI~qLEalNPtp-------------~P~~sl~lL~G~W~L~YTS~~ 159 (248)
....+..|++|+..+..... ..+.+....+..++.+|+....+. .+..+ ++|.|..+|.....+
T Consensus 52 ~~~~~~~~~~ll~~L~~l~~--~~~~~~~~~~~~l~~qL~~~~~~gR~~i~lD~d~~r~~~~~n-~~L~ggd~L~vP~rp 128 (229)
T PF06251_consen 52 QAEAEQQKQQLLAQLAQLEQ--SADSDQAAAAQQLIQQLQSLEATGRVVINLDPDWVRLNPEYN-PLLEGGDRLYVPPRP 128 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HS-HHHHHHHHHHHHHHTT--B----S----TTS-EESTTSS--B-ECEEEEE-----
T ss_pred hHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHHhccccceEEEecCHHHhhccccCC-CcCCCCcEEEECCCC
Confidence 46688888888887765433 455778889999999998775433 12222 688999999999888
Q ss_pred Ccc
Q 025746 160 GLF 162 (248)
Q Consensus 160 ~~l 162 (248)
...
T Consensus 129 ~~V 131 (229)
T PF06251_consen 129 NTV 131 (229)
T ss_dssp SEE
T ss_pred CEE
Confidence 753
No 6
>PF05973 Gp49: Phage derived protein Gp49-like (DUF891); InterPro: IPR009241 This entry consists of several hypothetical viral and bacterial proteins some are annotated as addiction module killer proteins.
Probab=30.33 E-value=1.7e+02 Score=21.80 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCCCCcccccc--CcEEEEEEeccCC
Q 025746 117 TSETRAEIVELITQLEAKNPTPAPTEALTLL--NAKWILVYTSFSG 160 (248)
Q Consensus 117 s~e~r~eI~elI~qLEalNPtp~P~~sl~lL--~G~W~L~YTS~~~ 160 (248)
+...+++|...+..|+..+|...+.. ...| +|-|+|.......
T Consensus 7 ~~~~~~~i~~~l~~l~~~G~~l~~~~-~k~l~~~~i~ElR~~~~~~ 51 (91)
T PF05973_consen 7 PDKERAKILAQLERLEEHGPSLGEPL-FKHLKGDGIYELRVRGGSN 51 (91)
T ss_pred CHHHHHHHHHHHHHHHhcCCccCCCc-ccccCcCCeEEEEEeecCC
Confidence 56788999999999988875433332 2344 6999999977663
No 7
>PF07624 PSD2: Protein of unknown function (DUF1585); InterPro: IPR011478 This entry represents a conserved region at the C terminus of a family of cytochrome-like proteins found in bacteria such as Rhodopirellula baltica and Solibacter usitatus. These proteins also contain IPR013036 from INTERPRO, IPR013039 from INTERPRO, IPR013042 from INTERPRO and IPR013043 from INTERPRO.
Probab=30.00 E-value=78 Score=23.41 Aligned_cols=39 Identities=15% Similarity=0.291 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHhC
Q 025746 97 DNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKN 135 (248)
Q Consensus 97 ~~lK~~LL~av~~t~RG~~as~e~r~eI~elI~qLEalN 135 (248)
+...+++.+.+....-|...+..++..|++++..+++.+
T Consensus 21 ~~~~~~~~~kl~~YAlGR~~~~~D~~~i~~i~~~~~~~~ 59 (76)
T PF07624_consen 21 DQFARCFAEKLLTYALGRPLEFSDRCEIDRIVEAFKANG 59 (76)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHcC
Confidence 444455555554433344455889999999999998866
No 8
>PF05015 Plasmid_killer: Plasmid maintenance system killer protein; InterPro: IPR007711 Several plasmids with proteic killer gene systems have been reported. All of them encode a stable toxin and an unstable antidote. Upon loss of the plasmid, the less stable inhibitor is inactivated more rapidly than the toxin, allowing the toxin to be activated. The activation of those systems result in cell filamentation and cessation of viable cell production. It has been verified that both the stable killer and the unstable inhibitor of the systems are short polypeptides. This family corresponds to the toxin.
Probab=28.35 E-value=2e+02 Score=21.96 Aligned_cols=31 Identities=10% Similarity=0.294 Sum_probs=18.4
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHHHh
Q 025746 104 VDSFYGTDRGLNATSETRAEIVELITQLEAK 134 (248)
Q Consensus 104 L~av~~t~RG~~as~e~r~eI~elI~qLEal 134 (248)
|+.+..++.-....++....+...+++|++.
T Consensus 10 l~~l~~~~~~k~~~~~~~~~~~~~L~~L~aa 40 (93)
T PF05015_consen 10 LEKLFEDGKTKKIPADIAKKLRRRLDQLDAA 40 (93)
T ss_pred HHHHHCCCCcCCcCHHHHHHHHHHHHHHHhC
Confidence 4445555443344566667777777777765
No 9
>TIGR03067 Planc_TIGR03067 Planctomycetes uncharacterized domain TIGR03067. This domain occurs in several species, mostly from the Planctomycetes division of the bacteria. It is expanded into a paralogous family of at least twenty-five members in Gemmata obscuriglobus UQM 2246. This family appears related to TIGR03066, which also is expanded into a large paralogous family in Gemmata obscuriglobus.
Probab=27.09 E-value=1.4e+02 Score=23.52 Aligned_cols=17 Identities=29% Similarity=0.524 Sum_probs=14.1
Q ss_pred ccccCcEEEEEEeccCC
Q 025746 144 LTLLNAKWILVYTSFSG 160 (248)
Q Consensus 144 l~lL~G~W~L~YTS~~~ 160 (248)
+..|+|.|+++.....+
T Consensus 4 l~~LqG~W~~v~~e~~G 20 (107)
T TIGR03067 4 LEKLQGTWKVVAAEKGG 20 (107)
T ss_pred HHhhCcEEEEEEEEeCC
Confidence 57899999999977754
No 10
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=26.80 E-value=90 Score=25.76 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=23.7
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccccccCcEEEE
Q 025746 109 GTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 153 (248)
Q Consensus 109 ~t~RG~~as~e~r~eI~elI~qLEalNPtp~P~~sl~lL~G~W~L 153 (248)
...+....|++-+++|++|+...|.+-+... +-|.|.|-.
T Consensus 33 ~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~-----~~LFGewsI 72 (117)
T PF14834_consen 33 RGARKPPLSEAAQAAAQKLIAVAERLLADGG-----PNLFGEWSI 72 (117)
T ss_dssp S--------HHHHHHHHHHHHHHHHHTTT-------SSTTSS--H
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHhccCC-----CCccccchH
Confidence 3345566799999999999999999975422 449999954
No 11
>PF12283 Protein_K: Bacteriophage protein K; InterPro: IPR020962 This family of proteins is found in the microviridae (isometric ssDNA phages) and are approximately 60 amino acids in length. The function of these proteins are unknown. In phi X174 site-directed mutagenesis of gene K produces small plaques on su- hosts. The mutant phage has an identical latent period, but a more reduced burst size than that of the wild-type phi X174. The reduced burst size in the gene K mutant suggests that the gene K protein, although not essential, has a role in increasing infectivity by increasing the burst size three to six fold [].
Probab=26.21 E-value=1.8e+02 Score=20.73 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHHHHHHh
Q 025746 96 IDNLKKALVDSFYGTDR-GLNATSETRAEIVELITQLEAK 134 (248)
Q Consensus 96 ~~~lK~~LL~av~~t~R-G~~as~e~r~eI~elI~qLEal 134 (248)
.--+|++||-+++..+| |+-+-. ++|.....+||.+
T Consensus 5 ~tli~qellll~yelnrsgllven---e~i~~~l~~le~l 41 (56)
T PF12283_consen 5 TTLIKQELLLLTYELNRSGLLVEN---EEIQSQLKQLEKL 41 (56)
T ss_pred HHHHHHHHHHHHHHhccccccccc---HHHHHHHHHHHHH
Confidence 45689999999999988 665533 4566667777764
No 12
>COG3880 Modulator of heat shock repressor CtsR, McsA [Signal transduction mechanisms]
Probab=21.25 E-value=1.5e+02 Score=26.17 Aligned_cols=42 Identities=33% Similarity=0.258 Sum_probs=34.9
Q ss_pred chhhHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHhCCCCC
Q 025746 92 EVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPA 139 (248)
Q Consensus 92 ~~~~~~~lK~~LL~av~~t~RG~~as~e~r~eI~elI~qLEalNPtp~ 139 (248)
-...+.+||..|-++|..-+- |+.+.|.+-|..|++.|++.+
T Consensus 134 ~~~~I~~L~e~Lq~~i~~Eef------EeAA~iRDqIr~Lk~k~~~dd 175 (176)
T COG3880 134 PKRKIIALKEALQDLIEREEF------EEAAVIRDQIRALKAKNGGDD 175 (176)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhhcCCCC
Confidence 457799999999999987653 778899999999999987654
No 13
>cd03715 RT_ZFREV_like RT_ZFREV_like: A subfamily of reverse transcriptases (RTs) found in sequences similar to the intact endogenous retrovirus ZFERV from zebrafish and to Moloney murine leukemia virus RT. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group II introns, bacterial msDNAs, hepadnaviruses, and caulimoviruses. These elements can be divided into two major groups. One group contains retroviruses and DNA viruses whose propagation involves an RNA intermediate. They are grouped together with transposable elements containing long terminal repeats (LTRs). The other group, also called poly(A)-type retrotransposons, contain fungal mitochondrial introns and transposable elements that lack LTRs. Phylogenetic analysis suggests that ZFERV belongs to a distinct group of retroviruses.
Probab=20.49 E-value=1.9e+02 Score=24.68 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=31.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhC---CCCCCCcc----ccccCc-EEEEEEe
Q 025746 112 RGLNATSETRAEIVELITQLEAKN---PTPAPTEA----LTLLNA-KWILVYT 156 (248)
Q Consensus 112 RG~~as~e~r~eI~elI~qLEalN---Ptp~P~~s----l~lL~G-~W~L~YT 156 (248)
+....++++++.+.+.|.+|+..+ |...|-.+ ..+=+| +||++.-
T Consensus 5 ~~~~~~~~~~~~~~~~v~~ll~~G~I~~~~s~~~sp~~~V~Kk~g~~~R~~vD 57 (210)
T cd03715 5 KQYPLPREAREGITPHIQELLEAGILVPCQSPWNTPILPVKKPGGNDYRMVQD 57 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCeECCCCCCCCceEEEEeCCCCcceEEEE
Confidence 345678999999999999999876 33333322 234478 9999743
No 14
>PF10047 DUF2281: Protein of unknown function (DUF2281); InterPro: IPR018739 This domain is found in putative uncharacterised proteins, though some proteins contaning this domain are described as a transcritional regulator of the Xre family.
Probab=20.17 E-value=2.2e+02 Score=20.54 Aligned_cols=47 Identities=17% Similarity=0.258 Sum_probs=32.9
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccccccCcEEEEE
Q 025746 100 KKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 154 (248)
Q Consensus 100 K~~LL~av~~t~RG~~as~e~r~eI~elI~qLEalNPtp~P~~sl~lL~G~W~L~ 154 (248)
++.|++.+... +++.+.+|...|+=|...++...... ..+.|.|+=.
T Consensus 2 ~~~l~~~i~~L------P~~~~~Evldfi~fL~~k~~~~~~~~--~~~~~~~~G~ 48 (66)
T PF10047_consen 2 EEELLEKIQQL------PEELQQEVLDFIEFLLQKYQQKESKK--KKLLGDWKGK 48 (66)
T ss_pred hHHHHHHHHHC------CHHHHHHHHHHHHHHHHhcccccccc--cccccccCCc
Confidence 35667777655 48899999999999998885443333 3567777533
Done!