BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025748
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 336 bits (862), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 157/249 (63%), Positives = 197/249 (79%), Gaps = 3/249 (1%)
Query: 1 MPEKITAENILDNLVETISDKVQKQK-AVSFFEEETSSSVTARFNRLFGRQKPVHHLLGG 59
MP+K E+++ +LV+ ++ VQK K SFFE+E SV++RFNRLF RQKP+HH+LGG
Sbjct: 1 MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFEQE--DSVSSRFNRLFDRQKPIHHVLGG 58
Query: 60 GKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGL 119
GKSADVLLWRNKKISASVLMGATAIWVLFEW+N+HFL++VC+AL+LGM+AQF W N SG
Sbjct: 59 GKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGF 118
Query: 120 FNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASLWVAAV 179
NRS S+VPR VLP + FA +G V VN L LQD++C G LKQ L+AV LWVAA+
Sbjct: 119 LNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAM 178
Query: 180 IGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGFLSKIPK 239
+GS CN LTVLYIGFV AHT+PVLYE++ED+VD F++++ + + YKKLD+GFLS+IP
Sbjct: 179 VGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPS 238
Query: 240 GKFKGKKSE 248
GKF KK E
Sbjct: 239 GKFGLKKRE 247
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 214 bits (544), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 152/239 (63%), Gaps = 5/239 (2%)
Query: 12 DNLVETISDKVQKQKAVS-----FFEEETSSSVTARFNRLFGRQKPVHHLLGGGKSADVL 66
++L+E IS+K+ + S + + ++ S+V A+ R+FGR+KPVH +LGGGK ADV
Sbjct: 13 ESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVF 72
Query: 67 LWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSK 126
LWR+KK+S +VL ATAIWVLFE + YH L+++C +L + F W N L N++ +
Sbjct: 73 LWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQ 132
Query: 127 VPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASLWVAAVIGSWCNL 186
+P +P E F + +++ +N+A +L+ I+ G LK+ L+ V LW+ +V+G+W N
Sbjct: 133 IPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNF 192
Query: 187 LTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGFLSKIPKGKFKGK 245
LT++YI FV HT+P+LYEKHEDKVD ++LQ QY D LSKIP K K
Sbjct: 193 LTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAK 251
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 149/239 (62%), Gaps = 5/239 (2%)
Query: 12 DNLVETISDKVQKQKAVSFF-----EEETSSSVTARFNRLFGRQKPVHHLLGGGKSADVL 66
++L+E I+DK+ + S + E+ S++ A+ RLFGR+KPVH +LGGG ADV
Sbjct: 13 ESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVF 72
Query: 67 LWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSK 126
LWR+KK+SASVL ATAIWVLFE + YHFL++VC L+ + A F N N++P K
Sbjct: 73 LWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPK 132
Query: 127 VPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASLWVAAVIGSWCNL 186
+P + E F I + + +N+A +L+ I+ G LK+ L+ V LW+ +V+G+W N
Sbjct: 133 IPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNF 192
Query: 187 LTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGFLSKIPKGKFKGK 245
LT++YI FV HT+P+LYEKHEDKVD ++L+ Y D LSK+P K K
Sbjct: 193 LTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 191 bits (485), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 127/204 (62%)
Query: 45 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALV 104
RLFGR++PVH +LGGGK AD+ +W+NKK+S VL GATA WV+FE + YH LT++C ++
Sbjct: 72 RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131
Query: 105 LGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKL 164
+ + F W N + N+SP K+P +P E + + + +N L++I+ G L
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191
Query: 165 KQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQN 224
K+ L+A+A LWV +++G N LT+ YI V T+P+ Y+K+EDKVD +L+
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251
Query: 225 QYKKLDSGFLSKIPKGKFKGKKSE 248
QY LD LSKIP G K KK +
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKKKD 275
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 128/204 (62%)
Query: 45 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALV 104
RLFGR++PVH +LGGGK AD+ +W++KK+S V GAT WVLFE + YH LT++C ++
Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127
Query: 105 LGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKL 164
+ + F W N + ++SP K+P +P E + + + +N + L++I+ G +
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187
Query: 165 KQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQN 224
K+ L A+A LWV +++G + LT+ YI V T+P+ Y+K+EDKVDS+ +L+
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247
Query: 225 QYKKLDSGFLSKIPKGKFKGKKSE 248
QY LD+ SKIP+G K KK +
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKKKD 271
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 142/240 (59%), Gaps = 9/240 (3%)
Query: 12 DNLVETISDKVQKQKAVSFFEE-----ETSSSVTARFNRLFGRQKPVHHLLGGGKSADVL 66
++++E IS+K+ S + S+S+ + RLFGR++P+H L GGGK AD+
Sbjct: 9 ESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIF 68
Query: 67 LWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSK 126
LWRNKK+S VL AT W+LFE L Y+ LT+ +L + F W + S ++SP
Sbjct: 69 LWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLH 128
Query: 127 VPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASLWVAAVIGSWCNL 186
+P +P +V + + + +N +L+DI+ G LK+ L+ +A LWV + +GS CN
Sbjct: 129 IPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNF 188
Query: 187 LTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLD----SGFLSKIPKGKF 242
LT++YI V T+PVLYEK+EDKVD F ++++ QY + D S +SKIPKG F
Sbjct: 189 LTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKGAF 248
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 177 bits (449), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 122/207 (58%), Gaps = 4/207 (1%)
Query: 45 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALV 104
RLFGR+KPVH +LGGGK AD+ LWRNKK+S VL TA WVLFE YH L +C +
Sbjct: 51 RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110
Query: 105 LGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKL 164
+ A F W N ++S +P +P + + + + +N L LL++I+ G +
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170
Query: 165 KQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQN 224
K+ ++ +A LWV ++IGS N LT+ Y V T+PVLYEK+EDKVD++ ++++
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230
Query: 225 QYKKLDSGFL----SKIPKGKFKGKKS 247
QY LD L SKIP+G KK
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKKKD 257
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 122/203 (60%)
Query: 44 NRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFAL 103
+LF RQ+ +H + GGGK AD+LLWR KI+A++++G + +W L E + Y+F+T++C A
Sbjct: 21 TKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHAS 80
Query: 104 VLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGK 163
+ ML F W S N +P VL F + + N+ L L D++CG
Sbjct: 81 MTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRD 140
Query: 164 LKQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQ 223
+ SL++ ++IG++ N + +L+IGFV+ TLPV+YE +ED VD+ + ++++
Sbjct: 141 PPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMK 200
Query: 224 NQYKKLDSGFLSKIPKGKFKGKK 246
YKK+D+ LSKIP+G K KK
Sbjct: 201 KLYKKVDTNVLSKIPRGTVKNKK 223
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 121/205 (59%), Gaps = 3/205 (1%)
Query: 34 ETSSSVTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNY 93
++ + A R+FGR++P+H +LGGGK ADVLLWR+KK++ +L T IW+LF +
Sbjct: 42 DSPVPINAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGR 101
Query: 94 HFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALG 153
LT +C +L +L F W N N+SP + +P + + + +N A
Sbjct: 102 RLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFA 158
Query: 154 LLQDISCGGKLKQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDS 213
L+ I+ +K ++AV LW+ +VIG+W + L++LYI FV HT+P+LYEK+ED++D
Sbjct: 159 TLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDP 218
Query: 214 FLNNVFQQLQNQYKKLDSGFLSKIP 238
+++ Y+ ++ FLSKIP
Sbjct: 219 IAEKAVIEMKKHYQVFEAKFLSKIP 243
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 111/203 (54%)
Query: 45 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALV 104
RL GRQ VH +GGGK+AD+LLWR + +S V++ +T W++FE+ FL++ L+
Sbjct: 24 RLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLL 83
Query: 105 LGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKL 164
+ ++ F +S NR +P VL E+ + + +N L + D++ G
Sbjct: 84 IVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDF 143
Query: 165 KQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQN 224
+ V LW+ + IGS+ +L T+LYIG + + T+P LY K++ KVD + ++L +
Sbjct: 144 RLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSH 203
Query: 225 QYKKLDSGFLSKIPKGKFKGKKS 247
YK +D +S++ K K S
Sbjct: 204 HYKIVDENVISRLSWSLSKDKDS 226
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 50 QKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLA 109
++ VH + G AD+++W+N++ +L T +W LFE Y F V +L ++
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 110 QFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLV 169
F W + LFNR ++P + E + + +N L + ++I G KQL
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 170 AVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKL 229
LW + +G++ N LT+LY+G V + +P LYE+++D +D L+ + +Q QY+K+
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKI 181
Query: 230 DSGFLSKI---PKGKFK 243
D L KI P K K
Sbjct: 182 DERLLQKIIAKPTNKIK 198
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 6/197 (3%)
Query: 53 VHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFF 112
++H LGGG+ AD++ W+NKK S ++L T IW LFE + Y F+T +C L+L +
Sbjct: 22 LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81
Query: 113 WVNI--SGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVA 170
W I S L P + + + + +N + L DIS G + L +A
Sbjct: 82 WSYIGSSQLIQSKPPSINDLRISESNW----RFLFNKINWFIIKLYDISSGKDFRLLFLA 137
Query: 171 VASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLD 230
V SLW+ +V+G++ + LT+LYI FV T+P+LYE++E+++ + + ++ K +
Sbjct: 138 VVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFN 197
Query: 231 SGFLSKIPKGKFKGKKS 247
S ++KIPK + K +++
Sbjct: 198 SKVINKIPKAQAKTRRT 214
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%)
Query: 54 HHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFW 113
H LG G AD+LLWRN+ + +L+ +T W LFE Y+ L+ V L+L + F W
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 114 VNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVAS 173
+ + NR VP +P E + +N L + DI+ +LL
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKK 228
LW + +G+ N LT++YIG + + + P++YEK++D +D +N+ + ++N +K
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFVRNISRK 188
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%)
Query: 44 NRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFAL 103
++LF R + +H +LGGG ADV+LWR K +S ++ A W++FE Y T++ L
Sbjct: 6 DKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVL 65
Query: 104 VLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGK 163
+L + F W + + NR +P F + + + +VN+ L + DI+
Sbjct: 66 LLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARD 125
Query: 164 LKQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQ 223
+ SL++ ++IGS + T+ + + T+P YE++ED + + + + +
Sbjct: 126 SELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTR 185
Query: 224 NQYKKLD 230
Y +L+
Sbjct: 186 ELYLRLE 192
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 53 VHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFF 112
V +LG G AD+ LW++K S L+ AT W L E++ + ++C L+L ML F
Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFL 63
Query: 113 WVNISGL-FNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAV 171
W + F R P P + + + + L +L +I+ G K L +
Sbjct: 64 WAKFGEVFFTRRPPTPEELNQPDSPLKALFSMMEGH----LLMLYEIAYGKDNKTFLKTI 119
Query: 172 ASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDS 231
+ + IGS+ +LLT+LYI V + T+PV+Y + ++ +DSF+ V ++ +N ++
Sbjct: 120 LYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEE-KNNLLEVFK 178
Query: 232 GFLSKIPKG 240
+SKIP+
Sbjct: 179 QVVSKIPRA 187
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRS 123
D+ LWR KK++ S L+ +T+ W+L + + +TIV + + + F W ++ L ++
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 124 PSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASLWVAAVIGSW 183
++ + E + + E + + + + V W+ + IG+
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 184 CNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGFL---SKIPKG 240
+ T L+IG V T+P L+E++ D++ L ++ + + Y L +K+ G
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILEMKNKLHHG 197
Query: 241 -KFKGKKSE 248
+ K KKSE
Sbjct: 198 TEEKVKKSE 206
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 40/206 (19%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRS 123
D+L WR+ K S V G + L + ++++ + LVL +LA V IS +S
Sbjct: 27 DLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISY-LVLSLLA----VTISYRVYKS 79
Query: 124 ---------------PSKVPRFVLPPEVFANIGTTVCANVNEALG------LLQDISCGG 162
P L + F +T A+VN AL L++D+
Sbjct: 80 VLQAVQKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAHVNHALKYIVRLFLVEDLVDSL 139
Query: 163 KLKQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQL 222
KL L+ W+ +G+ N +T+L +G + A T P++YEK++ ++D +++ V +
Sbjct: 140 KLALLM------WLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVHSHV 193
Query: 223 QNQYKKLDSGFLSKIPKGKFKGKKSE 248
++ +K+ +K+P G K KKSE
Sbjct: 194 KSITEKIQ----AKLP-GALK-KKSE 213
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 40/206 (19%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRS 123
D+L WR+ K S V G + L + ++++ + LVL +L+ V IS +S
Sbjct: 28 DLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISY-LVLSLLS----VTISFRVYKS 80
Query: 124 ---------------PSKVPRFVLPPEVFANIGTTVCANVNEALG------LLQDISCGG 162
P L + F ++ A+VN AL L++D+
Sbjct: 81 VLQAVQKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAHVNHALKSIVRLFLVEDLVDSL 140
Query: 163 KLKQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQL 222
KL L+ W+ IG+ N +T+L +G + A T P++YEK++ ++D +++ V Q+
Sbjct: 141 KLALLM------WLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQV 194
Query: 223 QNQYKKLDSGFLSKIPKGKFKGKKSE 248
++ +K+ +K+P G K KKSE
Sbjct: 195 KSITEKIQ----AKLP-GALK-KKSE 214
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRS 123
D+L WR+ K S V G + L + ++++ + LVL +L V IS +S
Sbjct: 28 DLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISY-LVLSLLT----VTISYRVYKS 80
Query: 124 ---------------PSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLL 168
P L + F T A+VN AL + + L L
Sbjct: 81 VLQAVQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDSL 140
Query: 169 VAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKK 228
+W+ +G+ N +T+L +G + T P++YEK++ ++D +++ V Q+++ +K
Sbjct: 141 KLALLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQVKSITEK 200
Query: 229 LDSGFLSKIPKGKFKGKKSE 248
+ +K+P G K KKSE
Sbjct: 201 IQ----AKLP-GALK-KKSE 214
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 45.4 bits (106), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTI---VCFALVLGMLAQFFWVNISGLF 120
D+L WR+ K V+ GA+ +++L + +++ + AL+ ++ + +
Sbjct: 977 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1034
Query: 121 NRSPSKVP-------RFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVAS 173
+S P + E+ + +VN + L+ + L L
Sbjct: 1035 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1094
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+WV +G+ N LT+L + ++ ++PV+YE+H+ ++D +L + +++ K+
Sbjct: 1095 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMAKIQ--- 1151
Query: 234 LSKIPKGKFKGK 245
+KIP K K +
Sbjct: 1152 -AKIPGLKRKAE 1162
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 44.3 bits (103), Expect = 9e-04, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTI---VCFALVLGMLAQFFWVNISGLF 120
D+L WR+ K V+ GA+ +++L + +++ + AL+ ++ + +
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 121 NRSPSKVP-------RFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVAS 173
+S P + E+ + +VN + L+ + L L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+WV +G+ N LT+L + ++ ++PV+YE+H+ ++D +L + +++ K+
Sbjct: 1096 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQ--- 1152
Query: 234 LSKIPKGKFKG 244
+KIP K K
Sbjct: 1153 -AKIPGLKRKA 1162
>sp|Q64548|RTN1_RAT Reticulon-1 OS=Rattus norvegicus GN=Rtn1 PE=2 SV=1
Length = 777
Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+W+ +G+ N LT+L + V+ TLPV+Y KH+ +VD +L V + K+
Sbjct: 710 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQ--- 766
Query: 234 LSKIPKGK 241
+KIP K
Sbjct: 767 -AKIPGAK 773
>sp|Q8K0T0|RTN1_MOUSE Reticulon-1 OS=Mus musculus GN=Rtn1 PE=1 SV=1
Length = 780
Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+W+ +G+ N LT+L + V+ TLPV+Y KH+ +VD +L V + K+
Sbjct: 713 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQ--- 769
Query: 234 LSKIPKGK 241
+KIP K
Sbjct: 770 -AKIPGAK 776
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTI---VCFALVLGMLAQFFWVNISGLF 120
D+L WR+ K V+ GA+ +++L + +++ + AL+ ++ + +
Sbjct: 1007 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1064
Query: 121 NRSPSKVP-------RFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVAS 173
+S P + E+ + +VN + L+ + L L
Sbjct: 1065 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1124
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+WV +G+ N LT+L + ++ ++PV+YE+H+ ++D +L + +++ K+
Sbjct: 1125 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ--- 1181
Query: 234 LSKIPKGKFKGK 245
+KIP K K +
Sbjct: 1182 -AKIPGLKRKAE 1192
>sp|Q5IS59|RTN1_PANTR Reticulon-1 OS=Pan troglodytes GN=RTN1 PE=2 SV=1
Length = 776
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+W+ +G+ N LT+L + V+ TLPV+Y KH+ ++D +L V + K+
Sbjct: 709 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ--- 765
Query: 234 LSKIPKGK 241
+KIP K
Sbjct: 766 -AKIPGAK 772
>sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1
Length = 776
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+W+ +G+ N LT+L + V+ TLPV+Y KH+ ++D +L V + K+
Sbjct: 709 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQ--- 765
Query: 234 LSKIPKGK 241
+KIP K
Sbjct: 766 -AKIPGAK 772
>sp|O70622|RTN2_MOUSE Reticulon-2 OS=Mus musculus GN=Rtn2 PE=1 SV=1
Length = 471
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 63 ADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQF---FWVNISGL 119
AD+L W++ + S +V G A L L++ +++ +LG+ A + +
Sbjct: 273 ADLLYWKDTRTSGAVFTGLMA--SLLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 330
Query: 120 FNRSPSKVPRFVLPPEVFANIGTTVCANVNEALG---LLQDISCGGKLKQLLVA---VAS 173
+R P F + + ++ T+ E L +S +L+ + V S
Sbjct: 331 VHRGDGTNP-F----QAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDS 385
Query: 174 L------WVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYK 227
L ++ +G+ N LT++ +G VA T+P+LY +H+ ++D ++ V QL +
Sbjct: 386 LKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYVGLVTNQLSHIKA 445
Query: 228 KLDS---GFLSKIPKGKFKGKKSE 248
K+ + G + P G K++
Sbjct: 446 KIRAKIPGTGTLAPTASVSGSKAK 469
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 37/242 (15%)
Query: 1 MPEKITAENILDNLVETISDKVQKQKAVSFFEEETSSSVTARFNRLFGRQKPVHHLLGGG 60
+P+K T I D +++IS + E + V AR F PVH
Sbjct: 714 IPKKPTI--IKDTRIDSISSLTKT--------ETVNKHVLARLLSDF----PVH------ 753
Query: 61 KSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFF----WVNI 116
D++ WR+ K + V T + +L + +++V + L+L +L+ + ++
Sbjct: 754 ---DLIFWRDVKKTGFVF--GTTLIMLLSLAAFSVISVVSY-LILALLSVTISFRVYKSV 807
Query: 117 SGLFNRSPSKVP-------RFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLV 169
+S P L E F + +VN+AL L+ + L L
Sbjct: 808 IQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLK 867
Query: 170 AVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKL 229
+W+ +G+ N +T+L + + ++P++YEK++ ++D ++ Q ++ +K+
Sbjct: 868 LAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKI 927
Query: 230 DS 231
+
Sbjct: 928 QA 929
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 20/179 (11%)
Query: 49 RQKP--VHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFL---TIVCFAL 103
R+ P +LGGGK AD LLW++ K + AI++L + Y+F+ + V AL
Sbjct: 369 REGPSKASRILGGGKVADTLLWKDLKQT------LIAIFILIS-IYYNFVATGSTVVTAL 421
Query: 104 VLGMLAQFFWVNISG-----LFNRSPSKVP--RFVLPPEVFANIGTTVCANVNEALGLLQ 156
+L ++ + G +F + K+P +F L + ++ +V ++ N + L+
Sbjct: 422 SKALLVASVFLFLHGILPEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSWNTTVKALR 481
Query: 157 DISCGGKLKQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFL 215
+ C G V + +A + +L ++ IG A ++YEK E ++DS +
Sbjct: 482 SL-CQGNDWSFFFKVVFVLLALSLAGAISLHSIFVIGLPIAFLAFLVYEKKEQEIDSIV 539
>sp|Q4FZ58|RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis GN=rtn2 PE=2 SV=2
Length = 321
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 29/193 (15%)
Query: 64 DVLLWRNKKISASVLMGAT------------------AIWVLFEWLNYHFLTIVCFALVL 105
D+L WR+ +SA L G T + +L L T + AL
Sbjct: 136 DLLYWRDILLSAGCLTGVTLSLLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLHALKR 195
Query: 106 GMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLK 165
G A F + + + V + + TT+C L+ + +LK
Sbjct: 196 GNGANPFQYYLDADLKLTTKQAEEITA--RVLSLLSTTICT--------LRSLFLVEELK 245
Query: 166 QLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQ 225
L + +++ +G+ N +TVL + + A T P+LY++H+ +VD +++ V ++ N
Sbjct: 246 DSLKFLVIIYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSKK-GNA 304
Query: 226 YKKLDSGFLSKIP 238
++ G + K P
Sbjct: 305 FRSKIQGTVKKPP 317
>sp|A7MC64|RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis GN=rtn1 PE=2 SV=2
Length = 764
Score = 40.8 bits (94), Expect = 0.009, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+W+ +G+ N LT+L + V+ +LPV+Y+K++ ++D +L V + K+
Sbjct: 698 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIVTKIQ--- 754
Query: 234 LSKIPKGKFK 243
+KIP K K
Sbjct: 755 -AKIPGTKQK 763
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 82/187 (43%), Gaps = 14/187 (7%)
Query: 56 LLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFF--- 112
L + D++ WR+ K + V T + +L + +++V + L+L +L+
Sbjct: 62 LFSTSQVHDLIFWRDVKKTGFVF--GTTLIMLLSLAAFSVISVVSY-LILALLSVTISFR 118
Query: 113 -WVNISGLFNRSPSKVP-------RFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKL 164
+ ++ +S P L E F N ++N AL L+ + L
Sbjct: 119 VYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDL 178
Query: 165 KQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQN 224
L +W+ +G+ N +T+L + + ++P++YEK++ ++D ++ Q ++
Sbjct: 179 VDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTKS 238
Query: 225 QYKKLDS 231
+K+ +
Sbjct: 239 IVEKIQA 245
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 101/232 (43%), Gaps = 14/232 (6%)
Query: 9 NILDNLVETISDKVQKQKAVSFFEEETSSSVTARFNRLFGRQKPVHHLLGGGKSADVLLW 68
+IL+ V+ SD QK ++ E +V++ ++ + LL D++ W
Sbjct: 791 DILERNVKNGSDLGISQKPITIRETTRVDAVSSLSKTELVKKHVLARLLTDFSVHDLIFW 850
Query: 69 RNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFF----WVNISGLFNRSP 124
R+ K + V T + +L + +++V + L+L +L+ + ++ +S
Sbjct: 851 RDVKKTGFVF--GTTLIMLLSLAAFSVISVVSY-LILALLSVTISFRIYKSVIQAVQKSE 907
Query: 125 SKVP-------RFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASLWVA 177
P L E F N ++N AL L+ + L L +W+
Sbjct: 908 EGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLM 967
Query: 178 AVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKL 229
+G+ N +T+L + + ++P++YEK++ ++D ++ Q ++ +K+
Sbjct: 968 TYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKI 1019
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 64 DVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFF----WVNISGL 119
D++ WR+ K + V T + +L + +++V + L+L +L+ + ++
Sbjct: 50 DLIFWRDVKKTGFVF--GTTLIMLLSLAAFSVISVVSY-LILALLSVTISFRIYKSVIQA 106
Query: 120 FNRSPSKVP-------RFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVA 172
+S P L E F N ++N AL L+ + L L
Sbjct: 107 VQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 166
Query: 173 SLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDS 231
+W+ +G+ N +T+L + + ++P++YEK++ ++D ++ Q ++ +K+ +
Sbjct: 167 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQA 225
>sp|Q4FZ76|RTN2_XENLA Reticulon-2 OS=Xenopus laevis GN=rtn2 PE=2 SV=1
Length = 321
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 64 DVLLWRNKKISASVLMGAT------------------AIWVLFEWLNYHFLTIVCFALVL 105
D+L WR+ +S L G T + +L L T + AL
Sbjct: 136 DLLYWRDTLLSTGCLTGVTLSLLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLHALKR 195
Query: 106 GMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLK 165
G A F + + + V F+ TT+C L+ + +LK
Sbjct: 196 GNGANPFQYYLDTDLKLTTKQAEEIVA--RAFSLASTTLCT--------LRSLFLVEELK 245
Query: 166 QLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQ 225
L + +++ +G+ N +TVL + + A T P+LY++H+ +VD +++ V +++ N
Sbjct: 246 DSLKFLVIVYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSKKV-NA 304
Query: 226 YKKLDSGFLSKIP 238
++ G K P
Sbjct: 305 FRSKFQGAAKKPP 317
>sp|Q5MY90|RTN1B_XENLA Reticulon-1-B OS=Xenopus laevis GN=rtn1-b PE=2 SV=1
Length = 752
Score = 39.3 bits (90), Expect = 0.023, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+W+ +G+ N LT+L + V+ +LPV+Y+K++ ++D +L V + K+
Sbjct: 686 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNIIVTKIQ--- 742
Query: 234 LSKIPKGKFK 243
+KIP K K
Sbjct: 743 -AKIPGTKQK 751
>sp|Q6IFY7|RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis GN=rtn1-a PE=2 SV=1
Length = 207
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 174 LWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGF 233
+W+ +G+ N LT+L + V+ +LPV+Y+K++ ++D +L V + K+
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIMTKIQ--- 197
Query: 234 LSKIPKGKFK 243
+KIP K K
Sbjct: 198 -AKIPGTKQK 206
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 50 QKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLA 109
Q LLG GK AD+LLWRN+K + + + + W F + F L
Sbjct: 367 QSTADQLLGCGKVADILLWRNEK---KTFVSFLVLNLFYYWF---FFSGNTFTSSAAQLL 420
Query: 110 QFFWVNISG-------LFNRSPSKVP--RFVLPPEVFANIGTTVCANVNEALGLLQDISC 160
F V + G +F +K+P RF + ++ + + N+ + + +S
Sbjct: 421 FIFAVALYGVSFVPSKIFGFQVNKIPPWRFEISESAVRDLSSDIVVVWNQGVRSFKSLSS 480
Query: 161 GGKLKQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHE 208
GG + SL++ +I S +L L+ + T +YE++E
Sbjct: 481 GGDWIKFFKIAGSLYLLKLIVSR-SLAAFLFTVMSFSFTGFFIYEQYE 527
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 52 PVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQF 111
PVH D++ WR+ K + V T + +L + +++V + L+L +L+
Sbjct: 775 PVH---------DLIFWRDVKKTGFVF--GTTLIMLLSLAAFSVISVVSY-LILALLSVT 822
Query: 112 F----WVNISGLFNRSPSKVP-------RFVLPPEVFANIGTTVCANVNEALGLLQDISC 160
+ ++ +S P L E F N +VN+AL L+ +
Sbjct: 823 ISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFL 882
Query: 161 GGKLKQLLVAVASLWVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQ 220
L L +W+ +G+ N +T+L + + ++P++YEK++ ++D ++
Sbjct: 883 VEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARD 942
Query: 221 QLQNQYKKL 229
Q ++ +K+
Sbjct: 943 QTKSIVEKI 951
>sp|O75298|RTN2_HUMAN Reticulon-2 OS=Homo sapiens GN=RTN2 PE=1 SV=1
Length = 545
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 175 WVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVFQQLQNQYKKLDSGFL 234
++ +G+ N LT+L +G + T+P+LY +H+ ++D ++ V QL + K+
Sbjct: 466 YILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKI----R 521
Query: 235 SKIP 238
+KIP
Sbjct: 522 AKIP 525
>sp|A7MRY4|LUXN_VIBHB Autoinducer 1 sensor kinase/phosphatase LuxN OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=luxN PE=1 SV=1
Length = 849
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 10 ILDNLVETISDKVQKQKAVSFFEEETSSSVTARFNRLFGRQKPVHHLLGGGKSADVLLWR 69
+ D L E + KV ++++ ++ SS+ TA LFG+ K V HLL ++ ++
Sbjct: 376 VFDELSEELEYKVSAKRSMKALYDKMSSNNTALVMPLFGQGKSVTHLLISPHKSNNQMFS 435
Query: 70 NKKISA 75
N++ISA
Sbjct: 436 NEEISA 441
>sp|P0C5S6|LUXN_VIBHA Autoinducer 1 sensor kinase/phosphatase LuxN OS=Vibrio harveyi
GN=luxN PE=3 SV=1
Length = 849
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 10 ILDNLVETISDKVQKQKAVSFFEEETSSSVTARFNRLFGRQKPVHHLLGGGKSADVLLWR 69
+ D L E + KV ++++ ++ SS+ TA LFG+ K V HLL ++ ++
Sbjct: 376 VFDELSEELEYKVSAKRSMKALYDKMSSNNTALVMPLFGQGKSVTHLLISPHKSNNQMFS 435
Query: 70 NKKISA 75
N++ISA
Sbjct: 436 NEEISA 441
>sp|B2TJZ6|ATPF_CLOBB ATP synthase subunit b OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=atpF PE=3 SV=1
Length = 159
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 95 FLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLP 133
F+TI+ F +++ +L FFW I G+ N V +L
Sbjct: 9 FMTIINFCILVAILKHFFWDKIKGIINERQDFVDEQLLK 47
>sp|B2UZJ6|ATPF_CLOBA ATP synthase subunit b OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=atpF PE=3 SV=1
Length = 159
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 95 FLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLP 133
F+TI+ F +++ +L FFW I G+ N V +L
Sbjct: 9 FMTIINFCILVAILKHFFWDKIKGIINERQDFVDEQLLK 47
>sp|Q84N49|CAF1P_MAIZE CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1
SV=1
Length = 674
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 71 KKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRF 130
+K+ V+ + LF NY++ T CF L+L W ++ ++ R +KVP
Sbjct: 250 EKVGGKVIHRQGGVIFLFRGRNYNYRTRPCFPLML-------WKPVAPVYPRLVTKVPGG 302
Query: 131 VLPPEV 136
+ P E
Sbjct: 303 LTPDEA 308
>sp|Q2SM94|CCA_HAHCH Multifunctional CCA protein OS=Hahella chejuensis (strain KCTC
2396) GN=cca PE=3 SV=1
Length = 422
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 15/123 (12%)
Query: 115 NISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASL 174
++S F P +V R +A++G TV E L L+QDI G+LK L +
Sbjct: 123 HVSPAFTEDPLRVLRVARFASRYADLGFTVAP---ETLQLMQDIQASGELKAL--TAERV 177
Query: 175 WVAAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFLNNVF--QQLQNQYKKLDSG 232
W V V + AH L ++ + LN +F Q + ++D+G
Sbjct: 178 WQETVRALGQKQPRVYFQVLKDAHALQDIFPE--------LNALFGVPQTPQYHPEVDTG 229
Query: 233 FLS 235
S
Sbjct: 230 LHS 232
>sp|Q56X72|RTNLS_ARATH Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2
SV=2
Length = 487
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 18/211 (8%)
Query: 15 VETISDKVQKQKAVSFFEEETSSSVTARF----NRLFGRQKPVHHLLGGGKSADVLLWRN 70
V IS V K+ + S+S T RF + Q + L+ D+++WR+
Sbjct: 185 VRKISPPVIKRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLV------DLVMWRD 238
Query: 71 KKISASVLMGATAIWVLFEW---LNYHFLTIVCFA--LVLGMLAQFFWVNISGLFNRSPS 125
S V T + + + LN+ F+++V + + LG++ + G+
Sbjct: 239 VSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERH 298
Query: 126 KVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQLLVAVASLWVAAVIGSWCN 185
KV + E + + +NE+L L+ + G L + V L+V A GS
Sbjct: 299 KV--VGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVV-LFVLARCGSSIT 355
Query: 186 LLTVLYIGFVAAHTLPVLYEKHEDKVDSFLN 216
L + GF+ A T+P ++ + ++ N
Sbjct: 356 LWNLAKFGFLGAFTIPKIFISYSTHFSAYGN 386
>sp|Q19272|MSH5_CAEEL MutS protein homolog 5 OS=Caenorhabditis elegans GN=msh-5 PE=2 SV=2
Length = 1369
Score = 32.0 bits (71), Expect = 4.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 20 DKVQKQKAVSFFEEETSSSVTARFNRLFGRQKPVHHLLGGGKS--ADVLLW 68
D V +QK V +F+++ ++ VTA+ + + GR K ++ + +S A ++ W
Sbjct: 336 DLVSRQKCVHYFKQDWNAEVTAKLSSILGRVKALNSVFQKFQSGTAQLIHW 386
>sp|Q08743|YO292_YEAST Vacuolar membrane protein YOR292C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOR292C PE=1 SV=1
Length = 309
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 167 LLVAVASLWV-----------AAVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSFL 215
L++ V SLW +AV + C + + I + A ++ Y H D + L
Sbjct: 61 LVIWVTSLWKFTSHYRQLYANSAVFATLCTNILLFGISDILAQSIACFYSYHVDPIPQIL 120
Query: 216 NNVFQQLQNQYKKLDSG 232
N+ F +QN + +++G
Sbjct: 121 NDTFHHVQNN-RDVENG 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,863,197
Number of Sequences: 539616
Number of extensions: 3555545
Number of successful extensions: 9585
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 9524
Number of HSP's gapped (non-prelim): 55
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)