Query 025749
Match_columns 248
No_of_seqs 139 out of 702
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 16:46:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025749.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025749hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ahn_A Thaumatin-like protein; 100.0 4.7E-90 1.6E-94 606.4 17.1 217 28-244 1-222 (222)
2 1du5_A Zeamatin; beta sandwich 100.0 5.3E-84 1.8E-88 561.9 13.0 201 28-244 1-206 (206)
3 1aun_A PR-5D; antifungal prote 100.0 3.5E-83 1.2E-87 557.4 15.8 202 27-246 1-208 (208)
4 2vhk_A Thaumatin-I; kinetics o 100.0 4.6E-83 1.6E-87 555.7 15.8 202 28-245 1-206 (206)
5 1z3q_A Thaumatin-like protein; 100.0 3.3E-82 1.1E-86 548.1 15.5 196 28-244 1-200 (200)
6 3g7m_A Xylanase inhibitor TL-X 100.0 9.2E-54 3.2E-58 355.6 13.5 116 28-147 1-118 (151)
7 3gd0_A Laminaripentaose-produc 94.7 0.13 4.5E-06 47.9 9.1 112 24-143 3-145 (367)
8 4aor_D Trypsin inhibitor 3; hy 74.3 0.87 3E-05 28.2 0.6 14 183-196 11-24 (37)
9 4ajy_V VON hippel-lindau disea 66.6 5 0.00017 33.2 3.8 52 24-81 18-69 (163)
10 3gd0_A Laminaripentaose-produc 66.5 5.2 0.00018 37.1 4.3 39 206-244 321-365 (367)
11 1lm8_V VHL, VON hippel-lindau 60.7 8.7 0.0003 31.6 4.2 52 24-81 15-66 (160)
12 1ok0_A Tendamistat, alpha-amyl 35.5 58 0.002 23.2 4.5 37 30-69 21-57 (74)
13 3q48_A Chaperone CUPB2; IG fol 32.6 31 0.0011 30.0 3.4 47 24-70 42-99 (257)
14 2hrv_A 2A cysteine proteinase; 30.4 13 0.00045 30.0 0.5 17 90-106 97-113 (142)
15 1z8r_A Coxsackievirus B4 polyp 27.7 15 0.00051 30.4 0.4 17 90-106 117-133 (166)
16 2xx6_A SPBC2 prophage-derived 26.7 61 0.0021 25.6 3.9 39 46-84 20-64 (142)
17 3p48_A Deoxyuridine 5'-triphos 23.5 1.1E+02 0.0036 24.4 4.8 57 28-84 7-71 (147)
18 2zwn_A Two-domain type laccase 22.7 1.3E+02 0.0043 26.6 5.6 53 27-81 44-104 (339)
19 3qbt_B Inositol polyphosphate 21.3 92 0.0031 24.2 4.0 46 26-71 45-97 (140)
20 3c2t_A Deoxyuridine triphospha 21.1 62 0.0021 25.4 2.9 38 48-85 24-67 (141)
21 1kbv_A ANIA, major outer membr 20.8 1.4E+02 0.0048 26.1 5.5 54 27-81 79-134 (327)
22 3ca9_A Deoxyuridine triphospha 20.1 66 0.0023 26.1 2.9 38 48-85 40-83 (165)
No 1
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=4.7e-90 Score=606.39 Aligned_cols=217 Identities=51% Similarity=1.046 Sum_probs=210.1
Q ss_pred eEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCCceeEEeeeccccCCCCCcccccCCCC-Cccccc
Q 025749 28 TTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCG-GSLFCN 106 (248)
Q Consensus 28 ~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaRtgCs~d~~g~~~C~TGdCg-g~l~C~ 106 (248)
++|||+|+|+|||||++++++|++++.++||+|+||+++++.+|++|+|||||||||+||++|+++|+||||+ |.|+|+
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~ 80 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN 80 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence 5899999999999999999999999899999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCCcceeEEeec--CCCceeeeccccCccccceeccCCCCCCCCCCCccccccccCCcCccccc-CCeeeeccchh
Q 025749 107 GIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRS-NSRVVACKSAC 183 (248)
Q Consensus 107 g~~g~ppaTlaEftl~--~~~d~YDVSlVdG~NlP~~i~P~~~~~~C~~~~C~~dl~~~CP~~l~v~~-~g~~v~C~SaC 183 (248)
+.++.||+|||||+|+ +++|||||||||||||||+|+|+++.+.|+.++|.+|||..||.|||+++ +|++|||||||
T Consensus 81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~saC 160 (222)
T 2ahn_A 81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSAC 160 (222)
T ss_dssp TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCHH
T ss_pred CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEecccccc
Confidence 8889999999999994 57999999999999999999998866789999999999999999999987 78999999999
Q ss_pred hhcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCcccCCCCCCCCceeecCC-CeEEEecC
Q 025749 184 FAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFCP 244 (248)
Q Consensus 184 ~~~~~d~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~-~y~vtFCP 244 (248)
.+|++|||||+|+|++|++|+||+||++||++||+||||||||++|||+|+++ +|+|||||
T Consensus 161 ~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 161 VKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp HHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred cccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999987 99999998
No 2
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=5.3e-84 Score=561.85 Aligned_cols=201 Identities=48% Similarity=0.962 Sum_probs=190.8
Q ss_pred eEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCC-CceeEEeeeccccCCCCCcccccCCCCCccccc
Q 025749 28 TTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPL-WSGRFWGRHGCRFDASGRGRCATGDCGGSLFCN 106 (248)
Q Consensus 28 ~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~-WsGriWaRtgCs~d~~g~~~C~TGdCgg~l~C~ 106 (248)
++|+|+|||+|||||++++ .++||+|+||+++++.+|++ |+|||||||||+||++|+++|+||||+|.|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~p-------~~gG~~L~~G~s~s~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~ 73 (206)
T 1du5_A 1 AVFTVVNQCPFTVWAASVP-------VGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCT 73 (206)
T ss_dssp CEEEEEECSSSCEEEEEET-------TTEEEEECTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCTTBSSCC
T ss_pred CEEEEEeCCCCCcCCeEec-------CCCCEecCCCCeEEEECCCCCcccceecccccCCCCCCCccccccCCCCeeecC
Confidence 5899999999999999986 34689999999999999998 999999999999999999999999999999999
Q ss_pred CCCCCCCcceeEEeec--CCCceeeeccccCccccceeccCCCCCCC-CCCCccccccccCCcCcccccCCeeeeccchh
Q 025749 107 GIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKC-SYAGCVSDLNLMCPAGLQVRSNSRVVACKSAC 183 (248)
Q Consensus 107 g~~g~ppaTlaEftl~--~~~d~YDVSlVdG~NlP~~i~P~~~~~~C-~~~~C~~dl~~~CP~~l~v~~~g~~v~C~SaC 183 (248)
+ ++.||+|||||+|+ +++|||||||||||||||+|+|++++ .| +.++|.+|||..||.||||+ +||+|||
T Consensus 74 g-~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~-~C~~~~~C~~dln~~CP~~L~v~-----~gC~saC 146 (206)
T 1du5_A 74 G-YGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGS-GCSRGPRCAVDVNARCPAELRQD-----GVCNNAC 146 (206)
T ss_dssp S-CCCSSCCEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSS-SCCCCCEECSCTTTTCCGGGEET-----TEECCHH
T ss_pred C-CCCCcceeeEEEeccCCCCceeeeeeecccccCEEEecCCCC-CCcCCCcccccchhhCCHHHhhc-----cccCChh
Confidence 8 88999999999994 68999999999999999999998653 69 99999999999999999994 6999999
Q ss_pred hhcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCcccCCCCCCCCceeecCC-CeEEEecC
Q 025749 184 FAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFCP 244 (248)
Q Consensus 184 ~~~~~d~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~-~y~vtFCP 244 (248)
++|++|||||+|+|.+ +|+|+.||++||++||+||||||||.+|+|+|+++ +|+|||||
T Consensus 147 ~~f~~~~yCC~g~~~~--~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 147 PVFKKDEYCCVGSAAN--DCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp HHHCCHHHHCCGGGGG--GCCCCHHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred hccCCCcccccCCCCC--cCCcchHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 9999999999999987 99999999999999999999999999999999986 99999998
No 3
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=3.5e-83 Score=557.42 Aligned_cols=202 Identities=45% Similarity=0.938 Sum_probs=189.9
Q ss_pred ceEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCCc-eeEEeeeccccCCCCCcccccCCCCCcccc
Q 025749 27 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWS-GRFWGRHGCRFDASGRGRCATGDCGGSLFC 105 (248)
Q Consensus 27 ~~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~Ws-GriWaRtgCs~d~~g~~~C~TGdCgg~l~C 105 (248)
+++|||+|||+|||||++++ .++||+|+|||++++.+|++|+ |||||||+|+||++|+++|+||||+|.|+|
T Consensus 1 ~~t~ti~N~C~~tVWp~~~p-------~~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C 73 (208)
T 1aun_A 1 SGVFEVHNNCPYTVWAAATP-------VGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLEC 73 (208)
T ss_dssp CCEEEEEECSSSCEEEEEET-------TTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSC
T ss_pred CcEEEEEeCCCCCcCCeEec-------CCCCeeCCCCCeEEEECCCCCcccceecccccCCCCCCCcccccCCcCceeec
Confidence 46999999999999999976 3568999999999999999995 999999999999999999999999999999
Q ss_pred cCCCCCCCcceeEEeec--CCCceeeeccccCccccceeccCC-CCCCCCCCCccccccccCCcCcccccCCeeeeccch
Q 025749 106 NGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIR-GSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSA 182 (248)
Q Consensus 106 ~g~~g~ppaTlaEftl~--~~~d~YDVSlVdG~NlP~~i~P~~-~~~~C~~~~C~~dl~~~CP~~l~v~~~g~~v~C~Sa 182 (248)
++ +++||+|||||+|+ +++|||||||||||||||+|+|++ +++.|+.++|.+|||..||.||||+ .||+||
T Consensus 74 ~g-~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlP~~i~P~~~g~g~C~~~~C~~dln~~CP~~L~v~-----~~C~sa 147 (208)
T 1aun_A 74 KG-WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVP-----GGCNNP 147 (208)
T ss_dssp SS-CCCSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEET-----TEECCH
T ss_pred CC-CCCCCcceEEEEecCCCCCceeeeecccCcccCeeeeeCCCCCCCCCcccccCcchhhCCHHHccc-----ccccCH
Confidence 98 88899999999994 679999999999999999999986 3468999999999999999999995 499999
Q ss_pred hhhcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCcccCCCCCCCCceeecC-C-CeEEEecCCC
Q 025749 183 CFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTG-S-NYLLTFCPRH 246 (248)
Q Consensus 183 C~~~~~d~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~-~y~vtFCP~~ 246 (248)
|++|++|||||+| ++|+|++||++||++||+||||||||++|||+|++ + +|+|||||++
T Consensus 148 C~af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP~g 208 (208)
T 1aun_A 148 CTTFGGQQYCCTQ-----GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG 208 (208)
T ss_dssp HHHTCSHHHHCTT-----SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred hhhcCCCcccccC-----CCCCcchHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCCCC
Confidence 9999999999999 68999999999999999999999999999999997 5 9999999975
No 4
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=4.6e-83 Score=555.67 Aligned_cols=202 Identities=43% Similarity=0.909 Sum_probs=190.1
Q ss_pred eEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCC-CceeEEeeeccccCCCCCcccccCCCCCccccc
Q 025749 28 TTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPL-WSGRFWGRHGCRFDASGRGRCATGDCGGSLFCN 106 (248)
Q Consensus 28 ~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~-WsGriWaRtgCs~d~~g~~~C~TGdCgg~l~C~ 106 (248)
++|||+|||+|||||++++ |++.++++||+|+||+++++.+|++ |+|||||||||+||+.|+++|+||||+|.|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~~--g~~~l~~gG~~L~~G~s~~~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~ 78 (206)
T 2vhk_A 1 ATFEIVNRCSYTVWAAASK--GDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCK 78 (206)
T ss_dssp CEEEEEECSSSCEEEEEEC--SSSEEEEEEEEECTTCEEEEECCTTCCSEEEEEEBSCEECTTSBEECSBSCCTTBSSCS
T ss_pred CEEEEEeCCCCCcCCEEcC--CCCcCCCCCeecCCCCEEEEECCCCCcccceeccccCCCCCCCCcccccCCCCceeecC
Confidence 5899999999999999987 4466678899999999999999998 999999999999999999999999999999999
Q ss_pred CCCCCCCcceeEEeec--CCCceeeeccccCccccceeccCCCCCCCCCCCccccccccCCcCcccccCCeeeeccchhh
Q 025749 107 GIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACF 184 (248)
Q Consensus 107 g~~g~ppaTlaEftl~--~~~d~YDVSlVdG~NlP~~i~P~~~~~~C~~~~C~~dl~~~CP~~l~v~~~g~~v~C~SaC~ 184 (248)
+ +++||+|||||+|+ ++ |||||||||||||||+|+|+++ .|+.++|.+|||..||.|||++ .+||||||+
T Consensus 79 g-~g~pPaTLaEftl~~~~~-dfYDVSlVDGfNlP~~i~p~~g--~C~~~~C~~dln~~CP~eL~v~----~~~C~saC~ 150 (206)
T 2vhk_A 79 R-FGRPPTTLAEFSLNQYGK-DYIDISNIKGFNVPMNFSPTTR--GCRGVRCAADIVGQCPAKLKAP----GGGCNDACT 150 (206)
T ss_dssp S-CCCSSCCEEEEEEEETTE-EEEEEECTTCBSSCEEEEESSS--SCCCEEECSCHHHHCCGGGBCT----TSSBCCHHH
T ss_pred C-CCCCCcceEEEEeccCCC-ceeeeeccCCccCCEEeeeCCC--CCCccccccchhhhCCHHHeec----cccccChhh
Confidence 8 88999999999994 45 9999999999999999999864 7999999999999999999996 259999999
Q ss_pred hcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCcccCCCCCCCCceeecCC-CeEEEecCC
Q 025749 185 AFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFCPR 245 (248)
Q Consensus 185 ~~~~d~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~-~y~vtFCP~ 245 (248)
+|++|||||+| ++|+|+.||++||++||+||||||||++| |+|+++ +|+|||||.
T Consensus 151 af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP~ 206 (206)
T 2vhk_A 151 VFQTSEYCCTT-----GKCGPTEYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCPT 206 (206)
T ss_dssp HHCCHHHHTTT-----SCCCCCHHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESCC
T ss_pred ccCCCcccccC-----CCCCcchhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCCC
Confidence 99999999999 69999999999999999999999999999 999986 999999994
No 5
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=3.3e-82 Score=548.13 Aligned_cols=196 Identities=46% Similarity=0.997 Sum_probs=185.8
Q ss_pred eEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCCc-eeEEeeeccccCCCCCcccccCCCCCccccc
Q 025749 28 TTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWS-GRFWGRHGCRFDASGRGRCATGDCGGSLFCN 106 (248)
Q Consensus 28 ~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~Ws-GriWaRtgCs~d~~g~~~C~TGdCgg~l~C~ 106 (248)
++|+|+|||+|||||++++ ++||+|+|||++++.+|++|+ |||||||||+||++|+++|+||||+|.|+|+
T Consensus 1 ~t~ti~N~C~~tVWp~~~p--------~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~ 72 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVP--------GGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCT 72 (200)
T ss_dssp CEEEEEECSSSCEEEEEET--------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCS
T ss_pred CEEEEEeCCCCCeeceEeC--------CCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecC
Confidence 4899999999999999863 468999999999999999995 9999999999999999999999999999999
Q ss_pred CCCCCCCcceeEEeec--CCCceeeeccccCccccceeccCCCCCCCCCCCccccccccCCcCcccccCCeeeeccchhh
Q 025749 107 GIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACF 184 (248)
Q Consensus 107 g~~g~ppaTlaEftl~--~~~d~YDVSlVdG~NlP~~i~P~~~~~~C~~~~C~~dl~~~CP~~l~v~~~g~~v~C~SaC~ 184 (248)
+ ++.||+|||||+|+ +++|||||||||||||||+|+|+++ .|+.++|.+|||..||.||||+ .||+|||+
T Consensus 73 g-~g~pPaTLaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g--~C~~~~C~~dln~~CP~~L~v~-----~gC~saC~ 144 (200)
T 1z3q_A 73 A-YGNPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSG--GCRGIRCAADINGQCPGALKAP-----GGCNNPCT 144 (200)
T ss_dssp S-CCCSSCCEEEEEEEETTTEEEEEEECTTCBSSCEEEEESSS--SSCCEEECSCHHHHCCTTTEET-----TEECCHHH
T ss_pred C-CCCCCcceEEEEecCCCCCceeeeeeeccccCCeeeeeCCC--CCCccccccchhhhCCHHHccc-----CcccCccc
Confidence 8 77899999999994 6799999999999999999999864 7999999999999999999995 39999999
Q ss_pred hcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCcccCCCCCCCCceeecCC-CeEEEecC
Q 025749 185 AFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFCP 244 (248)
Q Consensus 185 ~~~~d~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~-~y~vtFCP 244 (248)
+|++|||||+| ++|+|+.||++||++||+||||||||++|+|+|+++ +|+|||||
T Consensus 145 af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 145 VFKTDQYCCNS-----GACSPTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp HHCCHHHHCTT-----SCCCCCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred ccCCCcccCCC-----CCCCchhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 99999999999 799999999999999999999999999999999976 99999998
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=100.00 E-value=9.2e-54 Score=355.57 Aligned_cols=116 Identities=37% Similarity=0.804 Sum_probs=107.0
Q ss_pred eEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCCceeEEeeeccccCCCCCcccccCCC-CCccccc
Q 025749 28 TTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDC-GGSLFCN 106 (248)
Q Consensus 28 ~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaRtgCs~d~~g~~~C~TGdC-gg~l~C~ 106 (248)
++|+|+|||+|||||+++++. . +..+||+|+||+++++.+|++|+|||||||+|+||++|+++|+|||| +|+|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~~~~-~--p~~gG~~L~~g~s~~~~~p~~wsGRiWgRTgC~fd~~g~~~C~TGdCg~g~l~C~ 77 (151)
T 3g7m_A 1 APLTITNRCHFTVWPAVALVL-A--QGGGGTELHPGASWSLDTPVIGSQYIWGRTGCSFDRAGKGRCQTGDCGGSSLTCG 77 (151)
T ss_dssp CCEEEEECSSSCEEEEEEETT-S--SCCEECCBCTTCEEEECCCSSEEEEEEEEESCEECSSCCEECSBSCSSTTSCCSC
T ss_pred CEEEEEeCCCCCccCeeccCC-C--CCCCCeEcCCCCeEEEECCCCCcceeecccCCCCCCCCCcccccCCccCCccccc
Confidence 479999999999999998642 2 35789999999999999999999999999999999999999999999 7999999
Q ss_pred CCCCCCCcceeEEeecCCCceeeeccc-cCccccceeccCCC
Q 025749 107 GIGGSPPATLAEITLGQQQDFYDVSLV-DGYNIAMSILPIRG 147 (248)
Q Consensus 107 g~~g~ppaTlaEftl~~~~d~YDVSlV-dG~NlP~~i~P~~~ 147 (248)
+ +++||+|||||+|++++|||||||| |||||||+|+|+++
T Consensus 78 ~-~g~pPaTlaEftl~~~~d~YDVSlV~dG~NlP~~i~P~~g 118 (151)
T 3g7m_A 78 G-NPAVPTTMAEVSVLQGNYTYGVTSTLKGFNVPMNLKCSSG 118 (151)
T ss_dssp S-CCCSSCCEEEEEECSSEEEEEEESSSSCCSSCEEEEESSS
T ss_pred C-CCCCCceeEEEEccCCCceEEEEeccCCCCCCeEEEeCCC
Confidence 6 6789999999999767999999999 99999999999875
No 7
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=94.65 E-value=0.13 Score=47.88 Aligned_cols=112 Identities=19% Similarity=0.220 Sum_probs=67.5
Q ss_pred cccceEEEEEeCCCC--cccceeecCC---CCc---------c-----------ccCCceee-CCCCeeEEecCCCCcee
Q 025749 24 NIKATTITLFNKCEH--PVWPGIQASA---GKP---------L-----------LARGGFKL-PPNKAYTIRLPPLWSGR 77 (248)
Q Consensus 24 ~a~~~t~ti~N~C~~--tVw~~~~~~~---g~~---------~-----------~~~~g~~L-~~G~s~s~~vp~~WsGr 77 (248)
....-.|+|+||=.. .||..+++.. |+. . ..+-...| .+|+++++.+|. .+||
T Consensus 3 ~~~tlpl~l~Nns~~~~~Vy~yi~G~d~~~g~~~~v~~dG~~~p~~~~~~~~~~~~d~aI~l~~~G~s~ti~iP~-~sGR 81 (367)
T 3gd0_A 3 VPATIPLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGNPPTPAPDASIPGPAPGRSTTIQIPK-FSGR 81 (367)
T ss_dssp CCSEEEEEEEECSCCCSCEEEEEEEEETTTCCEEEECTTCCEEECCCCCSSCEECCCCCEECCCTTCEEEEEEES-EEEE
T ss_pred CCCceeEEEEeCCCCCCcEEEEEEeEeCCCCcEEEEeCCCcEecCCcccCCCCCCcceeEECCCCCCceEEEccC-cCce
Confidence 445678999999974 6998886532 210 0 01112345 367899999998 7999
Q ss_pred EEeeeccccCCCCCcccccCCCCCcccccCCC-CCCC----cceeEEeecCCCceeeeccccCccccceec
Q 025749 78 FWGRHGCRFDASGRGRCATGDCGGSLFCNGIG-GSPP----ATLAEITLGQQQDFYDVSLVDGYNIAMSIL 143 (248)
Q Consensus 78 iWaRtgCs~d~~g~~~C~TGdCgg~l~C~g~~-g~pp----aTlaEftl~~~~d~YDVSlVdG~NlP~~i~ 143 (248)
||=..|= .=.|.=..+ |..+=.-.. ..|- -.-+|||+.+..-|=++|.||-|.+||.|+
T Consensus 82 IyfS~g~----~L~f~~~~~---glv~Ps~~NpsDPN~~~~~~f~EfT~n~~gl~~N~S~VD~~~~Pl~l~ 145 (367)
T 3gd0_A 82 IYFSYGR----KMEFRLTTG---GLVQPAVQNPTDPNRDILFNWSEYTLNDSGLWINSTQVDMFSAPYTVG 145 (367)
T ss_dssp EEEEESS----CCCCEEETT---EECCCCTTSTTCTTTTSCEEEEEEEEETTEEEEECCCSSEECSCEEEE
T ss_pred EEEEcCC----ccEEEecCC---CccCCCCCCCCCCCCCceeeEEEEEecCcceecccceeccccCceEEE
Confidence 9954431 111222222 111100000 1111 234799996556889999999999999996
No 8
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=74.30 E-value=0.87 Score=28.16 Aligned_cols=14 Identities=43% Similarity=1.319 Sum_probs=12.0
Q ss_pred hhhcCCCCcccCCC
Q 025749 183 CFAFNSPRYCCTGS 196 (248)
Q Consensus 183 C~~~~~d~~CC~g~ 196 (248)
|.-|+.++|||+|.
T Consensus 11 c~~f~~p~~ccsg~ 24 (37)
T 4aor_D 11 CSGFGPPEQCCSGA 24 (37)
T ss_dssp ECTTSCGGGBTTSC
T ss_pred cCCCCCcccccccc
Confidence 66799999999984
No 9
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=66.63 E-value=5 Score=33.21 Aligned_cols=52 Identities=21% Similarity=0.362 Sum_probs=39.6
Q ss_pred cccceEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCCceeEEee
Q 025749 24 NIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGR 81 (248)
Q Consensus 24 ~a~~~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaR 81 (248)
+.....++|+|+++.+|-+-|..-.|.+..- ..|+||++..++ .|.+..|=-
T Consensus 18 S~~~~~V~FvN~s~~~V~v~WIDy~G~~~~Y---~tL~PG~~~~~~---TY~tHpWvf 69 (163)
T 4ajy_V 18 SREPSQVIFCNRSPRVVLPVWLNFDGEPQPY---PTLPPGTGRRIH---SYRGHLWLF 69 (163)
T ss_dssp CCCEEEEEEEECSSSCEEEEEECTTSCEEEC---CCBCTTEEEEEE---EETTCEEEE
T ss_pred CCceEEEEEEeCCCCeEEEEEECCCCCEEEe---eeeCCCCeEEec---CCCCCcEEE
Confidence 3456889999999999999999888875443 379999988776 355566643
No 10
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=66.45 E-value=5.2 Score=37.11 Aligned_cols=39 Identities=33% Similarity=0.533 Sum_probs=28.1
Q ss_pred chhhHHHHhhCC--CcccCCCCCCC---CceeecCC-CeEEEecC
Q 025749 206 TAYSRIFKAACP--RAYSYAYDDPT---SIATCTGS-NYLLTFCP 244 (248)
Q Consensus 206 t~ys~~fK~~CP--~AYsya~Dd~t---stftC~~~-~y~vtFCP 244 (248)
+.|++++++.=. .+|.|||||-. ++..-... ..+||+-|
T Consensus 321 NhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~ 365 (367)
T 3gd0_A 321 NHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDP 365 (367)
T ss_dssp CHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECC
T ss_pred cHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcC
Confidence 569999999855 78999999843 34444443 67888755
No 11
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=60.72 E-value=8.7 Score=31.62 Aligned_cols=52 Identities=21% Similarity=0.362 Sum_probs=38.9
Q ss_pred cccceEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCCceeEEee
Q 025749 24 NIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGR 81 (248)
Q Consensus 24 ~a~~~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaR 81 (248)
+.....++|+|+.+.+|-+-+..-.|.+..- ..|+||+.+..+ .+.+..|--
T Consensus 15 s~~~~~V~FvN~s~~~V~v~WIDy~G~~v~Y---~~L~PG~~~~q~---TY~tHpWif 66 (160)
T 1lm8_V 15 SREPSQVIFCNRSPRVVLPVWLNFDGEPQPY---PTLPPGTGRRIH---SYRGHLWLF 66 (160)
T ss_dssp CCCEEEEEEEECSSSCEEEEEECTTSCEEEC---CCBCTTEEEEEE---EETTCEEEE
T ss_pred CCceEEEEEEeCCCCeEEEEEECCCCCEEEe---eeeCCCCEEeCC---CcCCCcEEE
Confidence 4456899999999999999998877775433 259999988765 244556643
No 12
>1ok0_A Tendamistat, alpha-amylase inhibitor HOE-467A; 0.93A {Streptomyces tendae} SCOP: b.5.1.1 PDB: 1bvn_T 1hoe_A 2ait_A 3ait_A 4ait_A
Probab=35.49 E-value=58 Score=23.25 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=27.4
Q ss_pred EEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEe
Q 025749 30 ITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIR 69 (248)
Q Consensus 30 ~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~ 69 (248)
-.+.|.|+.+|-+.+.=..|... --..++||+-.+|-
T Consensus 21 T~V~N~Cs~tvsVtV~Y~dG~~~---PCrv~~PG~~~Tfg 57 (74)
T 1ok0_A 21 SQADNGCAETVTVKVVYEDDTEG---LCYAVAPGQITTVG 57 (74)
T ss_dssp EEEEECSSSCEEEEEEETTSCBC---CCEEECTTCEEEEE
T ss_pred EeecCCCcccEEEEEEEeCCCcc---eeEEeCCCceEEec
Confidence 35899999999988875555532 24789999887764
No 13
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=32.64 E-value=31 Score=29.96 Aligned_cols=47 Identities=19% Similarity=0.368 Sum_probs=26.6
Q ss_pred cccceEEEEEeCCCCcccceeecCCCC----------cc-ccCCceeeCCCCeeEEec
Q 025749 24 NIKATTITLFNKCEHPVWPGIQASAGK----------PL-LARGGFKLPPNKAYTIRL 70 (248)
Q Consensus 24 ~a~~~t~ti~N~C~~tVw~~~~~~~g~----------~~-~~~~g~~L~~G~s~s~~v 70 (248)
.....+|+|.|+=..++-+-+.-..+. |. ..+--|+|+||+...+.+
T Consensus 42 ~~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI 99 (257)
T 3q48_A 42 SEREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRI 99 (257)
T ss_dssp TCSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEE
T ss_pred CCcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEE
Confidence 334689999998776543332211111 10 113357899998877654
No 14
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=30.41 E-value=13 Score=30.01 Aligned_cols=17 Identities=59% Similarity=1.540 Sum_probs=14.9
Q ss_pred CCcccccCCCCCccccc
Q 025749 90 GRGRCATGDCGGSLFCN 106 (248)
Q Consensus 90 g~~~C~TGdCgg~l~C~ 106 (248)
|.+.|+-|||||.|.|.
T Consensus 97 g~G~~epGDCGG~L~C~ 113 (142)
T 2hrv_A 97 GEGPCEPGDCGGKLLCK 113 (142)
T ss_dssp EECCCCTTCTTCEEEET
T ss_pred EEcCCCCCCCCceeeeC
Confidence 35789999999999997
No 15
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=27.65 E-value=15 Score=30.40 Aligned_cols=17 Identities=41% Similarity=0.790 Sum_probs=15.0
Q ss_pred CCcccccCCCCCccccc
Q 025749 90 GRGRCATGDCGGSLFCN 106 (248)
Q Consensus 90 g~~~C~TGdCgg~l~C~ 106 (248)
|.+.|+-|||||.|.|.
T Consensus 117 ~~G~~epGDCGG~L~C~ 133 (166)
T 1z8r_A 117 ATGFSEPGDAGGILRCE 133 (166)
T ss_dssp EECSSSCCCCBSEEECS
T ss_pred EecCCCCCCCCceeeeC
Confidence 45789999999999997
No 16
>2xx6_A SPBC2 prophage-derived deoxyuridine 5'-triphospha nucleotidohydrolase YOSS; 1.74A {Bacillus subtilis} PDB: 2baz_A 2xy3_A* 2y1t_A* 2xcd_A 2xce_A*
Probab=26.69 E-value=61 Score=25.57 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=27.3
Q ss_pred cCCCCccccCCceeeCCCCee------EEecCCCCceeEEeeecc
Q 025749 46 ASAGKPLLARGGFKLPPNKAY------TIRLPPLWSGRFWGRHGC 84 (248)
Q Consensus 46 ~~~g~~~~~~~g~~L~~G~s~------s~~vp~~WsGriWaRtgC 84 (248)
..+|-.......+.|+||+.. .+.+|.++.|+|.+|.+-
T Consensus 20 ~sAG~DL~a~~~~~i~Pg~~~lv~Tg~~i~iP~g~~~~i~pRSgl 64 (142)
T 2xx6_A 20 QGDWIDLRAAEDVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSST 64 (142)
T ss_dssp ECSCEEEECSSCEEECTTCEEEEECCEEEECCTTEEEEEEECTTH
T ss_pred CCccEEEecCCCeEECCCCEEEEEcCEEEECCCCeEEEEEeCCCc
Confidence 344543333445788888864 566889999999999764
No 17
>3p48_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, DUMPPNP pyrophosphatase, phosphoprotein, structural genomics; HET: DUP; 1.67A {Saccharomyces cerevisiae} SCOP: b.85.4.0
Probab=23.53 E-value=1.1e+02 Score=24.36 Aligned_cols=57 Identities=18% Similarity=0.223 Sum_probs=35.8
Q ss_pred eEEEEEeCCCCccccee--ecCCCCccccCCceeeCCCCee------EEecCCCCceeEEeeecc
Q 025749 28 TTITLFNKCEHPVWPGI--QASAGKPLLARGGFKLPPNKAY------TIRLPPLWSGRFWGRHGC 84 (248)
Q Consensus 28 ~t~ti~N~C~~tVw~~~--~~~~g~~~~~~~g~~L~~G~s~------s~~vp~~WsGriWaRtgC 84 (248)
.++.|+..-+...-|.- ...+|-.......+.|+||+.. .+.+|.++.|+|.+|.+-
T Consensus 7 ~~~~v~~~~~~~~lP~~~t~~sAG~DL~a~~~~~i~Pg~~~lv~Tgi~i~iP~g~~~~i~pRSgl 71 (147)
T 3p48_A 7 KVLKIQLRSASATVPTKGSATAAGYDIYASQDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGL 71 (147)
T ss_dssp CEEEEEECSTTCCCCEESSTTCSSEEEECSSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHH
T ss_pred ccEEEEECCCCCCCcccCCCCcccEeEecCCCeEECCCCEEEEECCcEEECCCCeEEEEEECCcc
Confidence 45666665554444543 2334433333456788898754 446788999999999754
No 18
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=22.68 E-value=1.3e+02 Score=26.59 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=34.9
Q ss_pred ceEEEEEeCCCCcccceeecC--------CCCccccCCceeeCCCCeeEEecCCCCceeEEee
Q 025749 27 ATTITLFNKCEHPVWPGIQAS--------AGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGR 81 (248)
Q Consensus 27 ~~t~ti~N~C~~tVw~~~~~~--------~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaR 81 (248)
...|+|+|+-++...+-+.+- .|.|. .+...+.||+++++.+...-.|.+|=.
T Consensus 44 ~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~--vtq~~I~PG~~~~y~f~~~~~Gt~wyH 104 (339)
T 2zwn_A 44 DVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPG--VTQQPIEAGDSYTYKFKADRIGTLWYH 104 (339)
T ss_dssp EEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBT--TTBCCBCTTCEEEEEEECCSCEEEEEE
T ss_pred EEEEEEEECCCCCccEEeCCCCcCCCcccCCCCc--cccCccCCCCeEEEEEECCCCEEEEEE
Confidence 467899999987664444321 22221 122468999999988776667988865
No 19
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=21.27 E-value=92 Score=24.18 Aligned_cols=46 Identities=20% Similarity=0.188 Sum_probs=29.3
Q ss_pred cceEEEEEeCCCCcccceeecCC-CC----ccc--cCCceeeCCCCeeEEecC
Q 025749 26 KATTITLFNKCEHPVWPGIQASA-GK----PLL--ARGGFKLPPNKAYTIRLP 71 (248)
Q Consensus 26 ~~~t~ti~N~C~~tVw~~~~~~~-g~----~~~--~~~g~~L~~G~s~s~~vp 71 (248)
..++|+|.|....+.--.+.... +. +.+ .+.--.|.||++..+.+-
T Consensus 45 ~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~ 97 (140)
T 3qbt_B 45 QKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLD 97 (140)
T ss_dssp EEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEE
T ss_pred eeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEE
Confidence 46899999999888754444321 11 111 123348999999888764
No 20
>3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A*
Probab=21.14 E-value=62 Score=25.42 Aligned_cols=38 Identities=26% Similarity=0.300 Sum_probs=26.2
Q ss_pred CCCccccCCceeeCCCCe------eEEecCCCCceeEEeeeccc
Q 025749 48 AGKPLLARGGFKLPPNKA------YTIRLPPLWSGRFWGRHGCR 85 (248)
Q Consensus 48 ~g~~~~~~~g~~L~~G~s------~s~~vp~~WsGriWaRtgCs 85 (248)
+|-.......+.|+||+. ..+.+|.++.|+|++|.+-.
T Consensus 24 AG~DL~a~~~~~i~Pg~~~lv~Tg~~i~iP~g~~~~i~pRSsla 67 (141)
T 3c2t_A 24 AGYDISSVEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLA 67 (141)
T ss_dssp CSEEEECSSCEEECTTCEEEEECCEEEECCTTEEEEEECCHHHH
T ss_pred CcEeecCCeeEEECCCCEEEEEcCeEEEcCCCCEEEEEeCCccc
Confidence 443333334578888885 45568899999999997653
No 21
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=20.82 E-value=1.4e+02 Score=26.12 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=32.1
Q ss_pred ceEEEEEeCCC--CcccceeecCCCCccccCCceeeCCCCeeEEecCCCCceeEEee
Q 025749 27 ATTITLFNKCE--HPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGR 81 (248)
Q Consensus 27 ~~t~ti~N~C~--~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaR 81 (248)
..+|+|+|+-+ ...|..+.+-.+... ......+.||+++++.++..-.|.+|=.
T Consensus 79 ~v~v~~~N~~~~~~~~~ih~HG~~~~dG-~~~~~~i~PG~~~~y~f~~~~~Gt~wyH 134 (327)
T 1kbv_A 79 TVEVEFSNNPSSTVPHNVDFHAATGQGG-GAAATFTAPGRTSTFSFKALQPGLYIYH 134 (327)
T ss_dssp EEEEEEEECTTCSSCBCCEETTCCSGGG-GTTTTCBCTTEEEEEEEECCSCEEEEEE
T ss_pred EEEEEEEECCCCCCceeeEeCccccCCC-CCcceeecCCCEEEEEEECCCCeEEEEE
Confidence 45778899965 344444432111100 0112359999999988876667988853
No 22
>3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A}
Probab=20.11 E-value=66 Score=26.11 Aligned_cols=38 Identities=26% Similarity=0.300 Sum_probs=26.7
Q ss_pred CCCccccCCceeeCCCCe------eEEecCCCCceeEEeeeccc
Q 025749 48 AGKPLLARGGFKLPPNKA------YTIRLPPLWSGRFWGRHGCR 85 (248)
Q Consensus 48 ~g~~~~~~~g~~L~~G~s------~s~~vp~~WsGriWaRtgCs 85 (248)
+|-.......+.|+||+. ..+.+|+++.++|++|.+-.
T Consensus 40 AG~DL~a~~~~~l~Pg~~~lv~Tgi~i~iP~g~~~~I~pRSsla 83 (165)
T 3ca9_A 40 AGYDISSVEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLA 83 (165)
T ss_dssp SSEEEECSSCEEECTTCEEEEECSEEEECCTTEEEEEECCHHHH
T ss_pred ccEEEECCCCEEECCCCEEEEEcCcEEEcCCCCEEEEEecCccc
Confidence 443333344588999985 45668899999999997653
Done!