Query 025754
Match_columns 248
No_of_seqs 214 out of 2057
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 16:52:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vdw_A Vaccinia virus capping 100.0 3.7E-32 1.3E-36 231.2 16.6 226 2-247 12-253 (302)
2 3bgv_A MRNA CAP guanine-N7 met 100.0 4.4E-29 1.5E-33 213.2 22.6 223 8-247 3-239 (313)
3 1ri5_A MRNA capping enzyme; me 100.0 1.8E-27 6E-32 201.1 25.0 209 14-246 47-256 (298)
4 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.2E-20 7.4E-25 155.5 15.0 113 23-145 62-177 (261)
5 2a14_A Indolethylamine N-methy 99.8 8.4E-20 2.9E-24 152.0 14.7 141 4-146 25-197 (263)
6 4htf_A S-adenosylmethionine-de 99.8 1.4E-18 4.7E-23 146.0 17.1 119 24-152 61-179 (285)
7 3g2m_A PCZA361.24; SAM-depende 99.8 2.9E-19 9.7E-24 151.3 12.9 119 24-152 75-196 (299)
8 3sm3_A SAM-dependent methyltra 99.8 7.9E-19 2.7E-23 142.7 14.1 117 25-149 24-144 (235)
9 4hg2_A Methyltransferase type 99.8 6E-20 2E-24 152.4 6.6 119 4-147 18-136 (257)
10 1y8c_A S-adenosylmethionine-de 99.8 7.1E-18 2.4E-22 137.9 17.7 114 29-153 35-149 (246)
11 1pjz_A Thiopurine S-methyltran 99.8 7.3E-19 2.5E-23 140.9 11.4 110 29-146 20-140 (203)
12 3g5l_A Putative S-adenosylmeth 99.8 3E-18 1E-22 141.3 15.3 106 31-150 44-149 (253)
13 3bus_A REBM, methyltransferase 99.8 3.4E-17 1.2E-21 136.4 21.8 117 22-148 51-168 (273)
14 3h2b_A SAM-dependent methyltra 99.8 7.2E-19 2.4E-23 140.3 10.4 144 31-242 41-184 (203)
15 2p7i_A Hypothetical protein; p 99.8 9.8E-19 3.4E-23 143.2 11.5 109 30-155 41-150 (250)
16 3kkz_A Uncharacterized protein 99.8 8.6E-18 2.9E-22 139.8 17.2 108 30-148 45-152 (267)
17 3thr_A Glycine N-methyltransfe 99.8 1.3E-17 4.3E-22 140.5 18.4 121 30-154 56-183 (293)
18 3pfg_A N-methyltransferase; N, 99.8 1.4E-17 4.6E-22 138.2 17.8 107 25-146 44-151 (263)
19 1vl5_A Unknown conserved prote 99.8 2.5E-17 8.4E-22 136.4 19.3 106 29-146 35-140 (260)
20 3hem_A Cyclopropane-fatty-acyl 99.8 1.1E-17 3.7E-22 141.8 17.4 111 29-149 70-186 (302)
21 1kpg_A CFA synthase;, cyclopro 99.8 1.1E-17 3.8E-22 140.5 17.3 109 29-149 62-171 (287)
22 1xtp_A LMAJ004091AAA; SGPP, st 99.8 5E-18 1.7E-22 139.8 13.9 107 30-147 92-198 (254)
23 3f4k_A Putative methyltransfer 99.8 9.9E-18 3.4E-22 138.4 15.6 108 30-148 45-152 (257)
24 3d2l_A SAM-dependent methyltra 99.8 1.7E-17 5.9E-22 135.6 16.7 115 26-152 28-143 (243)
25 3dlc_A Putative S-adenosyl-L-m 99.8 3.2E-18 1.1E-22 137.5 12.0 119 21-149 33-151 (219)
26 3l8d_A Methyltransferase; stru 99.8 2.6E-18 8.8E-23 140.6 11.4 110 25-149 47-156 (242)
27 2i62_A Nicotinamide N-methyltr 99.8 7.6E-18 2.6E-22 139.5 14.3 115 30-146 55-198 (265)
28 3lcc_A Putative methyl chlorid 99.8 4E-18 1.4E-22 139.1 12.5 107 31-147 66-172 (235)
29 3dli_A Methyltransferase; PSI- 99.8 1.5E-18 5E-23 142.3 9.7 147 30-242 40-186 (240)
30 3ujc_A Phosphoethanolamine N-m 99.8 1.3E-17 4.4E-22 138.0 15.3 108 30-148 54-161 (266)
31 3dtn_A Putative methyltransfer 99.8 1.8E-17 6.1E-22 135.0 15.4 107 30-148 43-150 (234)
32 3hnr_A Probable methyltransfer 99.8 1.4E-17 4.7E-22 134.3 14.1 106 29-149 43-148 (220)
33 1ve3_A Hypothetical protein PH 99.8 2.3E-17 8E-22 133.4 15.1 115 26-151 33-147 (227)
34 3dh0_A SAM dependent methyltra 99.8 2.7E-17 9.4E-22 132.5 15.4 114 24-148 29-145 (219)
35 2g72_A Phenylethanolamine N-me 99.8 2.4E-17 8.1E-22 138.8 15.6 127 18-145 55-214 (289)
36 3vc1_A Geranyl diphosphate 2-C 99.7 3.4E-17 1.2E-21 139.4 16.3 109 30-149 116-224 (312)
37 2fk8_A Methoxy mycolic acid sy 99.7 4.2E-17 1.4E-21 139.0 16.9 109 29-149 88-197 (318)
38 2o57_A Putative sarcosine dime 99.7 6.9E-17 2.4E-21 136.3 17.8 109 29-148 80-189 (297)
39 2ex4_A Adrenal gland protein A 99.7 7.5E-18 2.6E-22 138.1 11.4 109 31-148 79-187 (241)
40 1xxl_A YCGJ protein; structura 99.7 1.2E-16 4E-21 130.9 18.4 107 29-147 19-125 (239)
41 3bkw_A MLL3908 protein, S-aden 99.7 5.5E-17 1.9E-21 132.6 16.4 106 31-150 43-148 (243)
42 3jwg_A HEN1, methyltransferase 99.7 3.1E-17 1.1E-21 132.3 14.5 110 30-148 28-142 (219)
43 3e23_A Uncharacterized protein 99.7 1.7E-17 5.9E-22 133.1 12.2 103 29-148 41-143 (211)
44 3ocj_A Putative exported prote 99.7 1.7E-17 5.6E-22 140.9 12.6 115 26-148 113-229 (305)
45 2pxx_A Uncharacterized protein 99.7 3E-17 1E-21 131.5 13.2 124 24-156 35-169 (215)
46 3jwh_A HEN1; methyltransferase 99.7 7.4E-17 2.5E-21 130.0 15.3 111 30-149 28-143 (217)
47 3ou2_A SAM-dependent methyltra 99.7 1E-16 3.4E-21 128.8 15.8 106 29-149 44-149 (218)
48 3bxo_A N,N-dimethyltransferase 99.7 1.5E-16 5.1E-21 129.7 16.5 109 26-149 35-144 (239)
49 2gb4_A Thiopurine S-methyltran 99.7 1.5E-17 5.1E-22 137.6 10.6 108 30-145 67-190 (252)
50 3gu3_A Methyltransferase; alph 99.7 1.5E-16 5E-21 133.7 16.0 107 30-149 21-129 (284)
51 3ofk_A Nodulation protein S; N 99.7 6.8E-17 2.3E-21 130.0 13.2 108 31-150 51-158 (216)
52 3ccf_A Cyclopropane-fatty-acyl 99.7 1E-16 3.4E-21 134.2 14.5 103 29-149 55-157 (279)
53 2yqz_A Hypothetical protein TT 99.7 2.3E-16 7.8E-21 130.4 15.8 107 29-148 37-143 (263)
54 2kw5_A SLR1183 protein; struct 99.7 1.1E-16 3.7E-21 127.5 13.2 108 29-150 28-135 (202)
55 3mgg_A Methyltransferase; NYSG 99.7 3.3E-16 1.1E-20 130.7 16.7 110 29-149 35-145 (276)
56 1nkv_A Hypothetical protein YJ 99.7 5.9E-17 2E-21 133.6 11.9 109 29-148 34-142 (256)
57 1wzn_A SAM-dependent methyltra 99.7 1.8E-16 6.1E-21 130.5 14.3 121 18-149 28-148 (252)
58 3cc8_A Putative methyltransfer 99.7 1.2E-16 4E-21 129.2 12.8 111 23-152 24-136 (230)
59 3mti_A RRNA methylase; SAM-dep 99.7 1.3E-16 4.5E-21 125.3 12.6 124 17-148 9-137 (185)
60 3p9n_A Possible methyltransfer 99.7 2.7E-16 9.1E-21 124.2 14.1 112 30-149 43-156 (189)
61 3g5t_A Trans-aconitate 3-methy 99.7 1.6E-16 5.3E-21 134.4 13.2 112 29-145 34-148 (299)
62 2p8j_A S-adenosylmethionine-de 99.7 1.7E-16 5.7E-21 126.9 12.3 111 29-149 21-131 (209)
63 1zx0_A Guanidinoacetate N-meth 99.7 5E-17 1.7E-21 132.9 9.2 113 26-146 55-170 (236)
64 2aot_A HMT, histamine N-methyl 99.7 3.7E-16 1.3E-20 131.7 14.8 114 31-150 52-176 (292)
65 3e8s_A Putative SAM dependent 99.7 1.6E-16 5.4E-21 128.2 10.7 106 30-150 51-156 (227)
66 3bkx_A SAM-dependent methyltra 99.7 2.8E-15 9.4E-20 124.9 18.5 117 23-147 34-160 (275)
67 2gs9_A Hypothetical protein TT 99.7 3.5E-16 1.2E-20 125.3 12.4 115 23-156 28-142 (211)
68 3cgg_A SAM-dependent methyltra 99.7 6.7E-16 2.3E-20 121.5 13.4 112 23-149 38-150 (195)
69 3eey_A Putative rRNA methylase 99.7 4.8E-16 1.7E-20 123.3 12.6 121 23-148 14-141 (197)
70 1vlm_A SAM-dependent methyltra 99.7 8.3E-16 2.8E-20 124.1 13.9 146 25-239 42-187 (219)
71 4fsd_A Arsenic methyltransfera 99.7 2.1E-16 7.3E-21 138.3 10.9 110 29-148 81-205 (383)
72 4e2x_A TCAB9; kijanose, tetron 99.7 5.8E-16 2E-20 136.8 13.7 150 29-241 105-254 (416)
73 3m70_A Tellurite resistance pr 99.7 4E-16 1.4E-20 130.9 11.4 104 31-146 120-223 (286)
74 3g07_A 7SK snRNA methylphospha 99.7 3E-16 1E-20 132.4 10.7 119 31-150 46-224 (292)
75 3orh_A Guanidinoacetate N-meth 99.7 4.7E-16 1.6E-20 127.3 11.1 117 23-145 52-169 (236)
76 2xvm_A Tellurite resistance pr 99.7 9.6E-16 3.3E-20 121.3 12.6 105 31-146 32-136 (199)
77 3iv6_A Putative Zn-dependent a 99.7 1E-15 3.5E-20 126.9 12.5 119 19-149 33-151 (261)
78 2avn_A Ubiquinone/menaquinone 99.7 1.2E-15 4E-20 126.5 12.9 112 24-152 47-158 (260)
79 1dus_A MJ0882; hypothetical pr 99.6 6.5E-15 2.2E-19 115.7 15.7 118 23-151 43-162 (194)
80 3i9f_A Putative type 11 methyl 99.6 1.3E-15 4.3E-20 118.0 10.9 100 29-148 15-114 (170)
81 3ege_A Putative methyltransfer 99.6 3.8E-16 1.3E-20 129.5 8.0 101 30-149 33-133 (261)
82 3ggd_A SAM-dependent methyltra 99.6 7.9E-16 2.7E-20 126.2 9.7 113 29-149 54-166 (245)
83 3grz_A L11 mtase, ribosomal pr 99.6 2.7E-15 9.2E-20 119.7 12.5 107 26-148 55-161 (205)
84 3evz_A Methyltransferase; NYSG 99.6 5.4E-15 1.8E-19 120.0 14.3 119 25-150 49-183 (230)
85 3njr_A Precorrin-6Y methylase; 99.6 8.3E-15 2.8E-19 117.2 15.0 117 21-153 44-161 (204)
86 2r3s_A Uncharacterized protein 99.6 2.4E-14 8.2E-19 122.6 18.9 108 30-147 164-272 (335)
87 3hm2_A Precorrin-6Y C5,15-meth 99.6 5.2E-15 1.8E-19 115.1 13.4 117 21-151 14-132 (178)
88 3fzg_A 16S rRNA methylase; met 99.6 5.6E-16 1.9E-20 121.3 7.4 106 27-145 45-151 (200)
89 3e05_A Precorrin-6Y C5,15-meth 99.6 1.4E-14 4.8E-19 115.5 15.7 117 20-150 28-146 (204)
90 3mcz_A O-methyltransferase; ad 99.6 2.6E-14 8.8E-19 123.4 17.9 107 32-146 180-287 (352)
91 3lpm_A Putative methyltransfer 99.6 5.6E-15 1.9E-19 122.4 13.0 125 21-149 36-179 (259)
92 2p35_A Trans-aconitate 2-methy 99.6 1.8E-15 6.1E-20 124.8 9.7 109 24-149 25-135 (259)
93 3fpf_A Mtnas, putative unchara 99.6 1.6E-14 5.6E-19 121.0 15.0 105 29-149 120-225 (298)
94 2fyt_A Protein arginine N-meth 99.6 6.9E-15 2.4E-19 126.7 12.9 107 29-143 62-168 (340)
95 1x19_A CRTF-related protein; m 99.6 2.5E-14 8.5E-19 124.0 16.5 113 23-146 181-295 (359)
96 3q7e_A Protein arginine N-meth 99.6 2.4E-15 8.3E-20 130.0 10.0 107 30-144 65-171 (349)
97 2esr_A Methyltransferase; stru 99.6 5.6E-15 1.9E-19 115.1 10.7 111 30-150 30-142 (177)
98 3htx_A HEN1; HEN1, small RNA m 99.6 2E-14 6.7E-19 133.9 15.9 112 30-150 720-838 (950)
99 2fhp_A Methylase, putative; al 99.6 1.6E-14 5.6E-19 113.1 13.3 114 30-150 43-158 (187)
100 1l3i_A Precorrin-6Y methyltran 99.6 2.1E-14 7.2E-19 112.6 13.3 110 29-152 31-140 (192)
101 3lbf_A Protein-L-isoaspartate 99.6 1.3E-14 4.5E-19 116.1 12.3 108 23-148 68-176 (210)
102 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.1E-14 7.1E-19 115.5 13.5 117 29-150 39-160 (214)
103 1qzz_A RDMB, aclacinomycin-10- 99.6 9.2E-14 3.2E-18 120.9 18.6 107 30-147 181-288 (374)
104 3r0q_C Probable protein argini 99.6 5.2E-15 1.8E-19 129.2 10.3 107 30-145 62-168 (376)
105 2ift_A Putative methylase HI07 99.6 3E-15 1E-19 119.5 8.1 111 31-150 53-167 (201)
106 1af7_A Chemotaxis receptor met 99.6 1.1E-14 3.8E-19 121.6 11.7 108 31-145 105-251 (274)
107 1nt2_A Fibrillarin-like PRE-rR 99.6 1.2E-14 4.3E-19 116.8 11.3 107 29-147 55-162 (210)
108 3dxy_A TRNA (guanine-N(7)-)-me 99.6 5.8E-15 2E-19 119.4 9.2 117 29-151 32-155 (218)
109 2qe6_A Uncharacterized protein 99.6 4E-14 1.4E-18 118.4 14.2 112 31-149 77-199 (274)
110 2y1w_A Histone-arginine methyl 99.6 1.3E-14 4.4E-19 125.4 11.4 106 30-145 49-154 (348)
111 1g6q_1 HnRNP arginine N-methyl 99.6 1.4E-14 4.7E-19 124.3 11.4 106 30-143 37-142 (328)
112 1tw3_A COMT, carminomycin 4-O- 99.6 2.1E-13 7.3E-18 118.0 19.0 108 30-148 182-290 (360)
113 4df3_A Fibrillarin-like rRNA/T 99.6 2.5E-14 8.7E-19 116.3 12.0 106 29-146 75-182 (233)
114 3dmg_A Probable ribosomal RNA 99.6 6.7E-14 2.3E-18 122.2 15.3 117 31-156 233-350 (381)
115 2fca_A TRNA (guanine-N(7)-)-me 99.6 2.1E-14 7E-19 115.7 11.2 117 29-150 36-157 (213)
116 1ws6_A Methyltransferase; stru 99.6 1.5E-14 5.1E-19 111.6 9.9 111 29-150 39-151 (171)
117 3dp7_A SAM-dependent methyltra 99.6 3.5E-14 1.2E-18 123.3 12.9 107 30-146 178-287 (363)
118 2frn_A Hypothetical protein PH 99.5 3E-14 1E-18 119.4 11.7 111 23-148 117-227 (278)
119 3ckk_A TRNA (guanine-N(7)-)-me 99.5 4.2E-14 1.4E-18 115.6 12.1 119 29-150 44-172 (235)
120 1p91_A Ribosomal RNA large sub 99.5 4.5E-14 1.5E-18 117.3 12.3 102 30-154 84-186 (269)
121 2fpo_A Methylase YHHF; structu 99.5 2.4E-14 8.2E-19 114.3 10.0 108 31-149 54-163 (202)
122 2yxd_A Probable cobalt-precorr 99.5 1.6E-13 5.4E-18 106.8 14.4 107 29-154 33-139 (183)
123 1vbf_A 231AA long hypothetical 99.5 5E-14 1.7E-18 114.3 11.7 101 29-149 68-168 (231)
124 2nxc_A L11 mtase, ribosomal pr 99.5 4.3E-14 1.5E-18 116.9 11.1 105 26-147 115-219 (254)
125 3i53_A O-methyltransferase; CO 99.5 7E-14 2.4E-18 119.8 12.7 106 31-147 169-275 (332)
126 3u81_A Catechol O-methyltransf 99.5 1.7E-13 5.9E-18 110.7 14.2 108 31-145 58-169 (221)
127 3m33_A Uncharacterized protein 99.5 9E-15 3.1E-19 118.7 6.6 111 24-157 41-155 (226)
128 3gwz_A MMCR; methyltransferase 99.5 2.5E-13 8.6E-18 118.2 16.1 105 30-145 201-306 (369)
129 3ntv_A MW1564 protein; rossman 99.5 5.1E-14 1.7E-18 114.8 11.0 104 31-145 71-175 (232)
130 3uwp_A Histone-lysine N-methyl 99.5 6.7E-14 2.3E-18 121.8 12.1 109 28-145 170-287 (438)
131 4hc4_A Protein arginine N-meth 99.5 3.7E-14 1.3E-18 123.1 10.6 104 31-143 83-186 (376)
132 1jsx_A Glucose-inhibited divis 99.5 2.8E-13 9.5E-18 108.0 14.6 101 31-147 65-166 (207)
133 1xdz_A Methyltransferase GIDB; 99.5 1.1E-13 3.7E-18 113.3 12.3 105 30-146 69-174 (240)
134 2ozv_A Hypothetical protein AT 99.5 5E-14 1.7E-18 116.9 9.9 130 20-149 23-173 (260)
135 3lec_A NADB-rossmann superfami 99.5 2E-13 7E-18 110.6 12.8 124 23-158 13-138 (230)
136 3b3j_A Histone-arginine methyl 99.5 1.2E-13 4.2E-18 123.9 12.5 106 30-145 157-262 (480)
137 3gnl_A Uncharacterized protein 99.5 2.3E-13 7.8E-18 111.2 12.9 124 23-158 13-138 (244)
138 3duw_A OMT, O-methyltransferas 99.5 1.9E-13 6.4E-18 110.4 12.2 107 31-146 58-167 (223)
139 2pjd_A Ribosomal RNA small sub 99.5 7E-14 2.4E-18 120.5 10.1 118 23-150 187-307 (343)
140 2yxe_A Protein-L-isoaspartate 99.5 1.7E-13 5.9E-18 109.9 11.7 104 29-149 75-180 (215)
141 4dcm_A Ribosomal RNA large sub 99.5 1.6E-13 5.4E-18 119.7 12.3 120 31-157 222-345 (375)
142 3tfw_A Putative O-methyltransf 99.5 2.6E-13 8.9E-18 111.7 12.9 106 31-146 63-170 (248)
143 3kr9_A SAM-dependent methyltra 99.5 3E-13 1E-17 109.4 12.9 122 24-158 8-132 (225)
144 2ip2_A Probable phenazine-spec 99.5 2.1E-13 7.1E-18 116.9 12.6 103 33-146 169-272 (334)
145 3lst_A CALO1 methyltransferase 99.5 2.1E-13 7.2E-18 117.7 12.5 109 24-146 176-286 (348)
146 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.7E-13 6E-18 111.5 11.3 108 29-148 75-184 (233)
147 1fbn_A MJ fibrillarin homologu 99.5 1.3E-13 4.6E-18 112.1 10.5 105 29-145 72-177 (230)
148 3gdh_A Trimethylguanosine synt 99.5 2.8E-15 9.6E-20 122.6 0.1 102 31-144 78-179 (241)
149 3p2e_A 16S rRNA methylase; met 99.5 4.3E-14 1.5E-18 114.8 7.1 120 21-146 14-139 (225)
150 3tr6_A O-methyltransferase; ce 99.5 1.9E-13 6.4E-18 110.5 10.8 106 31-145 64-173 (225)
151 2b78_A Hypothetical protein SM 99.5 2.9E-13 9.8E-18 118.5 12.6 123 25-149 206-334 (385)
152 2pbf_A Protein-L-isoaspartate 99.5 1.3E-13 4.5E-18 111.6 9.7 108 29-148 78-195 (227)
153 3dr5_A Putative O-methyltransf 99.5 2.2E-13 7.6E-18 110.3 10.9 103 32-145 57-162 (221)
154 1i1n_A Protein-L-isoaspartate 99.5 2E-13 6.7E-18 110.5 10.5 104 29-148 75-184 (226)
155 1o9g_A RRNA methyltransferase; 99.5 1.5E-13 5E-18 113.2 9.8 114 31-145 51-213 (250)
156 3mq2_A 16S rRNA methyltransfer 99.5 9.6E-14 3.3E-18 111.7 8.3 111 29-147 25-141 (218)
157 2b3t_A Protein methyltransfera 99.5 8.8E-13 3E-17 110.1 14.3 120 30-157 108-251 (276)
158 3mb5_A SAM-dependent methyltra 99.5 2.1E-13 7.4E-18 112.3 10.3 109 29-153 91-201 (255)
159 3tma_A Methyltransferase; thum 99.5 3.9E-13 1.3E-17 116.3 12.1 126 20-152 191-323 (354)
160 3id6_C Fibrillarin-like rRNA/T 99.5 5E-13 1.7E-17 108.8 11.9 107 29-147 74-182 (232)
161 1dl5_A Protein-L-isoaspartate 99.5 2.7E-13 9.1E-18 115.6 10.7 104 29-149 73-178 (317)
162 1nv8_A HEMK protein; class I a 99.5 5.8E-13 2E-17 111.9 12.4 111 31-149 123-252 (284)
163 2gpy_A O-methyltransferase; st 99.5 3.3E-13 1.1E-17 109.7 10.6 105 31-145 54-159 (233)
164 3g89_A Ribosomal RNA small sub 99.5 2.6E-13 9E-18 111.8 10.1 104 31-146 80-184 (249)
165 4dzr_A Protein-(glutamine-N5) 99.5 2.5E-14 8.6E-19 114.2 3.7 114 30-147 29-166 (215)
166 2pwy_A TRNA (adenine-N(1)-)-me 99.4 3.3E-13 1.1E-17 111.1 10.3 109 29-153 94-205 (258)
167 1u2z_A Histone-lysine N-methyl 99.4 1.1E-12 3.8E-17 115.8 14.1 110 29-145 240-358 (433)
168 1yb2_A Hypothetical protein TA 99.4 2.8E-13 9.5E-18 113.2 9.7 107 29-152 108-217 (275)
169 1g8a_A Fibrillarin-like PRE-rR 99.4 5.8E-13 2E-17 107.8 11.2 106 29-146 71-178 (227)
170 2igt_A SAM dependent methyltra 99.4 6.1E-13 2.1E-17 114.1 11.8 117 30-149 152-275 (332)
171 2b25_A Hypothetical protein; s 99.4 1.4E-12 4.9E-17 111.9 14.1 116 29-157 103-230 (336)
172 2yvl_A TRMI protein, hypotheti 99.4 7.8E-13 2.7E-17 108.2 11.8 110 29-154 89-198 (248)
173 3sso_A Methyltransferase; macr 99.4 3.4E-13 1.2E-17 117.0 9.8 107 24-145 209-323 (419)
174 1jg1_A PIMT;, protein-L-isoasp 99.4 4.7E-13 1.6E-17 109.1 10.2 104 29-149 89-192 (235)
175 2vdv_E TRNA (guanine-N(7)-)-me 99.4 8.6E-13 2.9E-17 108.4 11.6 115 30-149 48-176 (246)
176 1i9g_A Hypothetical protein RV 99.4 9.9E-13 3.4E-17 109.7 12.2 113 29-156 97-213 (280)
177 2zfu_A Nucleomethylin, cerebra 99.4 3.2E-13 1.1E-17 108.3 8.6 87 30-147 66-152 (215)
178 3r3h_A O-methyltransferase, SA 99.4 2E-13 6.7E-18 112.1 7.3 106 31-145 60-169 (242)
179 3c3p_A Methyltransferase; NP_9 99.4 6.3E-13 2.1E-17 106.4 10.1 102 31-145 56-159 (210)
180 3adn_A Spermidine synthase; am 99.4 7.9E-13 2.7E-17 111.5 11.1 111 29-146 81-198 (294)
181 2plw_A Ribosomal RNA methyltra 99.4 3.6E-13 1.2E-17 106.8 8.4 109 29-149 20-157 (201)
182 1ej0_A FTSJ; methyltransferase 99.4 5.9E-13 2E-17 102.7 9.4 110 29-150 20-140 (180)
183 2hnk_A SAM-dependent O-methylt 99.4 9.5E-13 3.2E-17 107.6 10.8 108 30-146 59-181 (239)
184 3hp7_A Hemolysin, putative; st 99.4 9.4E-14 3.2E-18 116.5 4.9 99 31-145 85-184 (291)
185 1r18_A Protein-L-isoaspartate( 99.4 4.7E-13 1.6E-17 108.5 8.8 104 29-148 82-196 (227)
186 3bwc_A Spermidine synthase; SA 99.4 8.8E-13 3E-17 111.8 10.4 112 30-148 94-212 (304)
187 3q87_B N6 adenine specific DNA 99.4 4.1E-13 1.4E-17 104.2 7.5 108 30-157 22-137 (170)
188 2as0_A Hypothetical protein PH 99.4 1.6E-12 5.4E-17 114.1 12.0 125 23-149 209-338 (396)
189 4a6d_A Hydroxyindole O-methylt 99.4 9.6E-12 3.3E-16 107.6 16.7 103 31-145 179-282 (353)
190 1sui_A Caffeoyl-COA O-methyltr 99.4 1.2E-12 4.2E-17 107.7 10.4 106 31-145 79-189 (247)
191 3bzb_A Uncharacterized protein 99.4 1.7E-12 5.7E-17 108.9 11.2 112 30-147 78-206 (281)
192 1ne2_A Hypothetical protein TA 99.4 4.1E-12 1.4E-16 100.8 12.9 101 30-149 50-150 (200)
193 3giw_A Protein of unknown func 99.4 3.8E-12 1.3E-16 105.5 12.7 112 32-147 79-201 (277)
194 3cbg_A O-methyltransferase; cy 99.4 2.3E-12 7.8E-17 105.0 11.2 106 31-145 72-181 (232)
195 3dou_A Ribosomal RNA large sub 99.4 2E-12 6.9E-17 102.3 10.4 109 29-150 23-143 (191)
196 1o54_A SAM-dependent O-methylt 99.4 1.4E-12 4.8E-17 108.9 9.9 108 29-152 110-219 (277)
197 3c3y_A Pfomt, O-methyltransfer 99.4 3E-12 1E-16 104.7 11.5 107 30-145 69-180 (237)
198 4azs_A Methyltransferase WBDD; 99.4 9.9E-13 3.4E-17 120.6 9.1 110 28-145 63-172 (569)
199 3tm4_A TRNA (guanine N2-)-meth 99.4 3.5E-12 1.2E-16 111.1 12.0 127 23-157 209-340 (373)
200 1wy7_A Hypothetical protein PH 99.4 9.9E-12 3.4E-16 99.0 13.7 105 30-149 48-152 (207)
201 2bm8_A Cephalosporin hydroxyla 99.4 9.5E-13 3.2E-17 107.6 7.6 101 31-146 81-187 (236)
202 2avd_A Catechol-O-methyltransf 99.4 3.2E-12 1.1E-16 103.4 10.5 107 30-145 68-178 (229)
203 4dmg_A Putative uncharacterize 99.4 5E-12 1.7E-16 110.7 12.3 120 22-149 205-329 (393)
204 3a27_A TYW2, uncharacterized p 99.4 3.1E-12 1E-16 106.8 10.5 105 28-148 116-221 (272)
205 1ixk_A Methyltransferase; open 99.4 3E-12 1E-16 109.0 10.5 112 29-147 116-247 (315)
206 1mjf_A Spermidine synthase; sp 99.4 3.8E-12 1.3E-16 106.7 10.6 110 29-147 73-194 (281)
207 3ajd_A Putative methyltransfer 99.4 1.2E-12 4.2E-17 109.3 7.5 115 30-147 82-212 (274)
208 3c0k_A UPF0064 protein YCCW; P 99.3 7.2E-12 2.5E-16 110.0 12.5 118 30-149 219-342 (396)
209 3reo_A (ISO)eugenol O-methyltr 99.3 3.8E-12 1.3E-16 110.7 10.6 97 30-145 202-299 (368)
210 3p9c_A Caffeic acid O-methyltr 99.3 4.7E-12 1.6E-16 109.9 11.2 97 30-145 200-297 (364)
211 2o07_A Spermidine synthase; st 99.3 4.2E-12 1.4E-16 107.6 10.4 113 30-147 94-210 (304)
212 2nyu_A Putative ribosomal RNA 99.3 4.5E-12 1.5E-16 100.0 9.8 110 29-150 20-149 (196)
213 1fp1_D Isoliquiritigenin 2'-O- 99.3 4E-12 1.4E-16 110.6 10.3 104 23-145 199-305 (372)
214 1iy9_A Spermidine synthase; ro 99.3 2.8E-12 9.6E-17 107.2 8.6 114 30-148 74-191 (275)
215 2pt6_A Spermidine synthase; tr 99.3 5E-12 1.7E-16 107.9 10.0 113 29-148 114-232 (321)
216 1inl_A Spermidine synthase; be 99.3 7.4E-12 2.5E-16 105.7 11.0 113 30-148 89-207 (296)
217 2oxt_A Nucleoside-2'-O-methylt 99.3 3.5E-13 1.2E-17 112.0 2.8 108 28-148 71-187 (265)
218 3k6r_A Putative transferase PH 99.3 4.4E-12 1.5E-16 105.8 9.2 106 25-145 119-224 (278)
219 1uir_A Polyamine aminopropyltr 99.3 4.2E-12 1.4E-16 108.1 9.2 113 29-146 75-195 (314)
220 2b2c_A Spermidine synthase; be 99.3 5.8E-12 2E-16 107.1 10.0 111 29-146 106-222 (314)
221 3opn_A Putative hemolysin; str 99.3 2.6E-12 9E-17 104.7 7.5 100 31-146 37-137 (232)
222 2i7c_A Spermidine synthase; tr 99.3 5.9E-12 2E-16 105.6 9.7 112 30-148 77-194 (283)
223 2h00_A Methyltransferase 10 do 99.3 2.8E-12 9.5E-17 105.6 7.4 114 31-145 65-191 (254)
224 3v97_A Ribosomal RNA large sub 99.3 8.7E-12 3E-16 116.7 11.6 113 31-148 539-659 (703)
225 2wa2_A Non-structural protein 99.3 3.8E-13 1.3E-17 112.4 2.1 109 28-148 79-195 (276)
226 1zq9_A Probable dimethyladenos 99.3 1.6E-11 5.6E-16 103.0 12.0 110 23-144 19-145 (285)
227 2qm3_A Predicted methyltransfe 99.3 2.6E-11 8.9E-16 105.6 13.2 106 31-148 172-280 (373)
228 3lcv_B Sisomicin-gentamicin re 99.3 5.4E-12 1.9E-16 103.2 8.1 104 30-145 131-235 (281)
229 2p41_A Type II methyltransfera 99.3 3.1E-12 1.1E-16 108.4 6.9 108 28-149 79-194 (305)
230 3frh_A 16S rRNA methylase; met 99.3 9E-12 3.1E-16 100.9 9.3 102 30-145 104-205 (253)
231 1wxx_A TT1595, hypothetical pr 99.3 6.6E-12 2.2E-16 109.7 9.2 115 31-149 209-328 (382)
232 1fp2_A Isoflavone O-methyltran 99.3 6.9E-12 2.4E-16 108.3 9.0 99 29-146 186-288 (352)
233 1xj5_A Spermidine synthase 1; 99.3 5.4E-12 1.8E-16 108.2 8.1 112 30-145 119-234 (334)
234 3gjy_A Spermidine synthase; AP 99.3 1.2E-11 4E-16 104.9 9.0 111 33-148 91-202 (317)
235 2ld4_A Anamorsin; methyltransf 99.3 1.4E-12 4.9E-17 101.4 2.9 93 29-147 10-102 (176)
236 2f8l_A Hypothetical protein LM 99.2 1.1E-11 3.7E-16 106.8 7.5 109 31-149 130-259 (344)
237 2yx1_A Hypothetical protein MJ 99.2 3.7E-11 1.3E-15 103.2 10.0 104 26-148 190-293 (336)
238 2h1r_A Dimethyladenosine trans 99.2 1.3E-10 4.4E-15 98.2 12.0 79 29-117 40-118 (299)
239 3m6w_A RRNA methylase; rRNA me 99.2 2.8E-11 9.6E-16 107.8 8.1 111 30-147 100-230 (464)
240 2yxl_A PH0851 protein, 450AA l 99.2 1.8E-10 6.2E-15 102.7 13.3 114 29-147 257-390 (450)
241 1zg3_A Isoflavanone 4'-O-methy 99.2 4.6E-11 1.6E-15 103.3 8.7 97 30-145 192-292 (358)
242 2frx_A Hypothetical protein YE 99.2 8.8E-11 3E-15 105.3 10.0 111 31-147 117-247 (479)
243 2jjq_A Uncharacterized RNA met 99.2 3E-10 1E-14 100.4 13.0 110 29-157 288-397 (425)
244 1sqg_A SUN protein, FMU protei 99.2 1.9E-10 6.5E-15 101.9 11.5 111 30-146 245-374 (429)
245 2cmg_A Spermidine synthase; tr 99.1 6.5E-11 2.2E-15 98.2 7.4 100 30-148 71-173 (262)
246 3m4x_A NOL1/NOP2/SUN family pr 99.1 8.6E-11 3E-15 104.5 8.0 112 30-147 104-235 (456)
247 3ldu_A Putative methylase; str 99.1 1.7E-10 6E-15 100.7 9.6 124 20-150 183-348 (385)
248 3gru_A Dimethyladenosine trans 99.1 1.2E-09 4E-14 92.0 14.0 85 23-117 41-126 (295)
249 3ldg_A Putative uncharacterize 99.1 6.5E-10 2.2E-14 96.9 12.5 124 20-150 182-347 (384)
250 1uwv_A 23S rRNA (uracil-5-)-me 99.1 1.2E-09 4.2E-14 96.8 14.3 114 30-156 285-398 (433)
251 3k0b_A Predicted N6-adenine-sp 99.1 3E-10 1E-14 99.4 9.8 124 20-150 189-354 (393)
252 2ih2_A Modification methylase 99.1 2.4E-10 8.2E-15 100.7 8.6 110 23-149 30-167 (421)
253 2okc_A Type I restriction enzy 99.1 1.4E-10 4.7E-15 103.3 6.9 112 31-149 171-310 (445)
254 2qfm_A Spermine synthase; sper 99.1 1.5E-09 5.3E-14 93.1 13.1 125 31-157 188-327 (364)
255 3fut_A Dimethyladenosine trans 99.0 2.2E-09 7.4E-14 89.3 12.0 106 23-145 38-144 (271)
256 2dul_A N(2),N(2)-dimethylguano 99.0 9.4E-10 3.2E-14 95.8 9.3 105 31-149 47-167 (378)
257 3bt7_A TRNA (uracil-5-)-methyl 99.0 4.8E-09 1.6E-13 91.1 13.5 113 31-157 213-337 (369)
258 2xyq_A Putative 2'-O-methyl tr 99.0 5.4E-10 1.9E-14 93.7 6.9 97 29-148 61-173 (290)
259 3tqs_A Ribosomal RNA small sub 99.0 4.1E-09 1.4E-13 86.9 11.9 81 23-109 20-101 (255)
260 1yub_A Ermam, rRNA methyltrans 99.0 7.6E-11 2.6E-15 96.7 0.9 104 29-145 27-144 (245)
261 3axs_A Probable N(2),N(2)-dime 99.0 3.5E-09 1.2E-13 92.4 10.5 107 31-150 52-162 (392)
262 1qam_A ERMC' methyltransferase 98.9 1.4E-08 4.9E-13 83.1 11.6 69 23-95 21-90 (244)
263 2ar0_A M.ecoki, type I restric 98.9 5.7E-09 1.9E-13 95.0 8.8 114 31-149 169-315 (541)
264 2r6z_A UPF0341 protein in RSP 98.9 3E-09 1E-13 87.8 6.3 83 31-116 83-172 (258)
265 3uzu_A Ribosomal RNA small sub 98.9 4.9E-08 1.7E-12 81.5 13.7 70 22-96 32-105 (279)
266 2b9e_A NOL1/NOP2/SUN domain fa 98.8 2.9E-08 1E-12 84.0 12.0 113 29-146 100-234 (309)
267 3evf_A RNA-directed RNA polyme 98.8 9.9E-09 3.4E-13 84.4 7.8 115 28-152 71-192 (277)
268 4gqb_A Protein arginine N-meth 98.8 1.2E-08 4.1E-13 93.7 8.0 102 32-143 358-464 (637)
269 3ftd_A Dimethyladenosine trans 98.8 3.5E-08 1.2E-12 81.1 9.8 69 23-96 22-91 (249)
270 1m6y_A S-adenosyl-methyltransf 98.8 3.7E-08 1.3E-12 83.0 10.1 81 29-113 24-106 (301)
271 3khk_A Type I restriction-modi 98.8 1.2E-08 4.1E-13 92.8 7.6 121 24-149 237-398 (544)
272 3cvo_A Methyltransferase-like 98.8 1.2E-07 4.1E-12 75.1 12.3 105 30-145 29-153 (202)
273 3v97_A Ribosomal RNA large sub 98.7 4.4E-08 1.5E-12 91.7 11.1 127 21-151 179-352 (703)
274 3b5i_A S-adenosyl-L-methionine 98.7 2.1E-07 7.1E-12 80.6 14.3 111 32-148 53-227 (374)
275 3lkd_A Type I restriction-modi 98.7 1.2E-07 4.2E-12 86.0 12.6 116 31-149 221-361 (542)
276 3ll7_A Putative methyltransfer 98.7 2.1E-08 7.3E-13 87.7 6.4 79 29-113 91-171 (410)
277 1qyr_A KSGA, high level kasuga 98.7 4.5E-08 1.5E-12 80.5 7.8 83 24-113 13-98 (252)
278 3gcz_A Polyprotein; flavivirus 98.6 3.7E-08 1.3E-12 81.1 5.9 116 28-153 87-210 (282)
279 3s1s_A Restriction endonucleas 98.6 3.1E-07 1.1E-11 85.9 12.5 116 30-150 320-469 (878)
280 3ua3_A Protein arginine N-meth 98.6 7.8E-08 2.7E-12 88.5 7.7 108 32-143 410-531 (745)
281 3c6k_A Spermine synthase; sper 98.6 5.9E-07 2E-11 77.5 12.5 114 30-145 204-330 (381)
282 2efj_A 3,7-dimethylxanthine me 98.6 3.2E-07 1.1E-11 79.6 10.8 112 32-149 53-228 (384)
283 1m6e_X S-adenosyl-L-methionnin 98.6 1.2E-07 4E-12 81.7 8.0 110 32-147 52-210 (359)
284 3o4f_A Spermidine synthase; am 98.6 1.7E-07 5.8E-12 78.4 8.5 113 29-146 81-198 (294)
285 3eld_A Methyltransferase; flav 98.5 4.3E-07 1.5E-11 75.3 8.2 117 27-153 77-200 (300)
286 2k4m_A TR8_protein, UPF0146 pr 98.4 2.5E-07 8.6E-12 68.8 5.3 89 29-148 33-123 (153)
287 2px2_A Genome polyprotein [con 98.4 3.2E-07 1.1E-11 74.5 5.3 114 28-154 70-193 (269)
288 2qy6_A UPF0209 protein YFCK; s 98.3 2.9E-06 9.9E-11 69.8 8.5 122 31-158 60-224 (257)
289 2oyr_A UPF0341 protein YHIQ; a 98.2 1.2E-06 3.9E-11 72.2 5.5 82 30-117 85-176 (258)
290 1wg8_A Predicted S-adenosylmet 98.2 6.2E-06 2.1E-10 68.2 9.6 75 29-111 20-95 (285)
291 2wk1_A NOVP; transferase, O-me 98.2 2.9E-05 9.9E-10 64.6 13.6 106 31-147 106-245 (282)
292 4auk_A Ribosomal RNA large sub 98.2 1.1E-05 3.8E-10 69.3 10.9 97 27-143 207-303 (375)
293 4fzv_A Putative methyltransfer 98.2 8.9E-06 3E-10 70.0 9.7 114 29-147 146-285 (359)
294 3lkz_A Non-structural protein 98.1 1.6E-05 5.6E-10 65.7 10.4 118 28-157 91-217 (321)
295 2zig_A TTHA0409, putative modi 98.1 1.3E-05 4.5E-10 67.2 8.7 55 22-77 226-280 (297)
296 3ufb_A Type I restriction-modi 98.0 4.3E-05 1.5E-09 69.2 10.5 116 31-149 217-365 (530)
297 3p8z_A Mtase, non-structural p 97.9 2.1E-05 7.3E-10 62.9 6.0 117 28-157 75-199 (267)
298 1g60_A Adenine-specific methyl 97.6 0.00016 5.5E-09 59.4 7.5 56 21-77 202-257 (260)
299 2vz8_A Fatty acid synthase; tr 97.5 5.6E-05 1.9E-09 79.6 5.1 103 30-146 1239-1348(2512)
300 1rjd_A PPM1P, carboxy methyl t 97.5 0.0017 5.7E-08 55.3 13.4 130 11-144 71-230 (334)
301 3tka_A Ribosomal RNA small sub 97.5 0.0002 6.9E-09 60.6 6.7 82 24-112 49-135 (347)
302 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00025 8.6E-09 58.6 6.4 100 30-150 108-221 (344)
303 2uyo_A Hypothetical protein ML 97.3 0.011 3.8E-07 49.6 15.7 113 33-149 104-221 (310)
304 1i4w_A Mitochondrial replicati 96.7 0.0053 1.8E-07 52.5 8.4 59 32-94 59-118 (353)
305 3g7u_A Cytosine-specific methy 96.4 0.0045 1.5E-07 53.5 6.1 75 33-113 3-79 (376)
306 1boo_A Protein (N-4 cytosine-s 96.4 0.005 1.7E-07 52.1 6.0 54 22-76 243-296 (323)
307 1eg2_A Modification methylase 96.3 0.0075 2.6E-07 50.9 6.4 55 21-76 232-289 (319)
308 3tos_A CALS11; methyltransfera 96.2 0.05 1.7E-06 44.3 10.8 118 23-147 61-218 (257)
309 1g55_A DNA cytosine methyltran 96.2 0.0028 9.7E-08 54.1 3.3 73 32-113 2-76 (343)
310 2c7p_A Modification methylase 96.1 0.011 3.8E-07 50.0 6.5 70 31-113 10-79 (327)
311 2oo3_A Protein involved in cat 95.8 0.0039 1.3E-07 51.5 2.3 109 31-149 91-201 (283)
312 1f8f_A Benzyl alcohol dehydrog 95.5 0.042 1.4E-06 47.0 7.8 98 29-145 188-288 (371)
313 2qrv_A DNA (cytosine-5)-methyl 95.4 0.04 1.4E-06 45.9 7.3 75 31-113 15-91 (295)
314 3s2e_A Zinc-containing alcohol 95.3 0.037 1.3E-06 46.7 6.9 98 29-145 164-262 (340)
315 3ubt_Y Modification methylase 95.3 0.029 9.8E-07 47.2 6.1 69 33-113 1-69 (331)
316 3qv2_A 5-cytosine DNA methyltr 95.0 0.036 1.2E-06 46.9 5.9 73 31-113 9-84 (327)
317 3fwz_A Inner membrane protein 95.0 0.27 9.4E-06 35.6 10.0 102 32-151 7-110 (140)
318 4h0n_A DNMT2; SAH binding, tra 94.9 0.031 1.1E-06 47.4 5.3 72 33-113 4-77 (333)
319 3iei_A Leucine carboxyl methyl 94.7 1.7 5.8E-05 36.6 19.2 190 9-245 61-286 (334)
320 3m6i_A L-arabinitol 4-dehydrog 94.5 0.17 5.9E-06 42.9 9.0 101 29-145 177-282 (363)
321 2py6_A Methyltransferase FKBM; 94.0 0.13 4.4E-06 44.8 7.3 61 30-90 225-291 (409)
322 3fpc_A NADP-dependent alcohol 94.0 0.097 3.3E-06 44.4 6.3 98 29-145 164-265 (352)
323 4ej6_A Putative zinc-binding d 93.9 0.2 6.9E-06 42.8 8.1 98 29-145 180-283 (370)
324 1pqw_A Polyketide synthase; ro 93.7 0.062 2.1E-06 41.4 4.2 96 29-145 36-136 (198)
325 1rjw_A ADH-HT, alcohol dehydro 93.6 0.29 9.9E-06 41.2 8.6 99 28-145 161-260 (339)
326 3vyw_A MNMC2; tRNA wobble urid 93.6 0.63 2.1E-05 38.8 10.2 120 31-158 96-237 (308)
327 2dph_A Formaldehyde dismutase; 93.2 0.11 3.6E-06 45.0 5.2 106 29-145 183-298 (398)
328 1uuf_A YAHK, zinc-type alcohol 93.0 0.23 7.9E-06 42.4 7.1 95 29-145 192-287 (369)
329 1pl8_A Human sorbitol dehydrog 92.9 0.14 4.8E-06 43.4 5.6 100 29-145 169-272 (356)
330 1v3u_A Leukotriene B4 12- hydr 92.8 0.2 6.8E-06 42.0 6.3 97 29-145 143-243 (333)
331 1e3j_A NADP(H)-dependent ketos 92.8 0.2 6.8E-06 42.4 6.3 98 29-145 166-270 (352)
332 3ip1_A Alcohol dehydrogenase, 92.7 0.78 2.7E-05 39.5 10.2 102 29-145 211-317 (404)
333 3jyn_A Quinone oxidoreductase; 92.5 0.29 9.8E-06 40.9 6.9 96 29-145 138-238 (325)
334 3l9w_A Glutathione-regulated p 92.4 0.69 2.4E-05 40.2 9.3 102 32-150 4-106 (413)
335 3gms_A Putative NADPH:quinone 92.3 0.22 7.6E-06 41.9 5.9 96 29-145 142-242 (340)
336 2d8a_A PH0655, probable L-thre 92.2 0.33 1.1E-05 40.9 6.9 96 31-145 167-266 (348)
337 3uog_A Alcohol dehydrogenase; 92.1 0.27 9.3E-06 41.8 6.4 97 29-145 187-286 (363)
338 1jvb_A NAD(H)-dependent alcoho 92.1 0.25 8.5E-06 41.7 6.0 98 29-145 168-270 (347)
339 2eih_A Alcohol dehydrogenase; 92.0 0.36 1.2E-05 40.6 7.0 97 29-145 164-264 (343)
340 4dvj_A Putative zinc-dependent 91.9 0.53 1.8E-05 40.0 8.0 95 31-145 171-269 (363)
341 3llv_A Exopolyphosphatase-rela 91.7 1.3 4.4E-05 31.7 8.9 100 32-150 6-107 (141)
342 3uko_A Alcohol dehydrogenase c 91.7 0.39 1.3E-05 41.0 6.9 100 29-145 191-294 (378)
343 2fzw_A Alcohol dehydrogenase c 91.6 0.63 2.1E-05 39.6 8.1 98 29-145 188-291 (373)
344 1p0f_A NADP-dependent alcohol 91.6 0.52 1.8E-05 40.1 7.6 98 29-145 189-292 (373)
345 1kol_A Formaldehyde dehydrogen 91.6 0.43 1.5E-05 41.1 7.1 107 29-145 183-299 (398)
346 4b7c_A Probable oxidoreductase 91.4 0.32 1.1E-05 40.8 5.9 98 29-145 147-247 (336)
347 2b5w_A Glucose dehydrogenase; 91.3 0.7 2.4E-05 39.1 8.0 96 29-145 164-272 (357)
348 3two_A Mannitol dehydrogenase; 91.3 0.54 1.8E-05 39.6 7.3 91 28-145 173-264 (348)
349 3qwb_A Probable quinone oxidor 91.2 0.43 1.5E-05 39.9 6.6 97 29-145 146-246 (334)
350 1yb5_A Quinone oxidoreductase; 91.2 0.35 1.2E-05 41.0 6.0 97 29-145 168-268 (351)
351 1vj0_A Alcohol dehydrogenase, 91.2 0.26 9E-06 42.2 5.2 100 29-145 193-297 (380)
352 2hcy_A Alcohol dehydrogenase 1 91.0 0.32 1.1E-05 41.0 5.6 98 29-145 167-268 (347)
353 2j3h_A NADP-dependent oxidored 90.9 0.6 2.1E-05 39.2 7.1 98 29-145 153-254 (345)
354 1cdo_A Alcohol dehydrogenase; 90.7 0.66 2.3E-05 39.5 7.3 98 29-145 190-293 (374)
355 2h6e_A ADH-4, D-arabinose 1-de 90.6 0.23 7.9E-06 41.8 4.3 95 31-145 170-268 (344)
356 3fbg_A Putative arginate lyase 90.2 1.1 3.6E-05 37.8 8.1 95 31-145 150-247 (346)
357 2jhf_A Alcohol dehydrogenase E 90.1 0.72 2.5E-05 39.2 7.1 98 29-145 189-292 (374)
358 1e3i_A Alcohol dehydrogenase, 90.0 0.81 2.8E-05 38.9 7.3 98 29-145 193-296 (376)
359 2j8z_A Quinone oxidoreductase; 90.0 0.63 2.1E-05 39.3 6.5 97 29-145 160-260 (354)
360 4eso_A Putative oxidoreductase 90.0 3.5 0.00012 32.8 10.8 109 31-145 7-137 (255)
361 3jv7_A ADH-A; dehydrogenase, n 89.9 0.39 1.3E-05 40.4 5.1 98 28-145 168-269 (345)
362 2dq4_A L-threonine 3-dehydroge 89.9 0.28 9.5E-06 41.3 4.2 95 31-145 164-261 (343)
363 1wly_A CAAR, 2-haloacrylate re 89.8 1.1 3.6E-05 37.5 7.8 97 29-145 143-243 (333)
364 1id1_A Putative potassium chan 89.7 2.2 7.6E-05 31.0 8.7 104 32-150 3-109 (153)
365 3oig_A Enoyl-[acyl-carrier-pro 89.5 6.8 0.00023 31.1 12.2 113 31-145 6-146 (266)
366 3pxx_A Carveol dehydrogenase; 89.3 4.8 0.00016 32.4 11.2 112 31-145 9-152 (287)
367 1piw_A Hypothetical zinc-type 89.3 0.34 1.2E-05 41.1 4.3 96 29-145 177-275 (360)
368 4dup_A Quinone oxidoreductase; 89.2 1.1 3.7E-05 37.8 7.4 97 29-145 165-264 (353)
369 3c85_A Putative glutathione-re 89.1 2.3 7.7E-05 32.0 8.5 102 32-150 39-143 (183)
370 1qor_A Quinone oxidoreductase; 88.8 0.7 2.4E-05 38.5 5.9 96 29-145 138-238 (327)
371 2c0c_A Zinc binding alcohol de 88.7 0.95 3.3E-05 38.4 6.8 97 29-145 161-260 (362)
372 1ej6_A Lambda2; icosahedral, n 88.6 0.34 1.2E-05 46.7 4.0 104 29-145 819-925 (1289)
373 4a2c_A Galactitol-1-phosphate 88.5 2.4 8.2E-05 35.4 9.1 98 29-145 158-259 (346)
374 4eye_A Probable oxidoreductase 88.5 0.79 2.7E-05 38.5 6.1 96 29-145 157-256 (342)
375 3o26_A Salutaridine reductase; 88.1 2.7 9.4E-05 34.1 9.0 83 31-115 11-101 (311)
376 2cdc_A Glucose dehydrogenase g 87.8 0.78 2.7E-05 38.9 5.6 91 32-145 181-277 (366)
377 2zig_A TTHA0409, putative modi 87.7 0.37 1.3E-05 39.9 3.4 62 83-148 22-99 (297)
378 3me5_A Cytosine-specific methy 87.7 0.69 2.4E-05 41.1 5.3 58 32-92 88-145 (482)
379 3goh_A Alcohol dehydrogenase, 87.4 0.83 2.9E-05 37.8 5.4 87 29-145 140-228 (315)
380 3ijr_A Oxidoreductase, short c 87.2 8.7 0.0003 31.2 11.5 112 31-145 46-181 (291)
381 3ioy_A Short-chain dehydrogena 87.2 7.9 0.00027 31.9 11.4 84 31-115 7-97 (319)
382 1iz0_A Quinone oxidoreductase; 87.1 0.47 1.6E-05 39.1 3.7 92 29-145 123-217 (302)
383 2zb4_A Prostaglandin reductase 86.8 1.3 4.3E-05 37.4 6.4 98 29-145 156-259 (357)
384 4eez_A Alcohol dehydrogenase 1 86.8 2.4 8.3E-05 35.3 8.1 98 29-145 161-262 (348)
385 3grk_A Enoyl-(acyl-carrier-pro 86.5 12 0.0004 30.4 12.5 111 31-145 30-168 (293)
386 1lss_A TRK system potassium up 86.4 4.3 0.00015 28.4 8.3 99 32-148 4-104 (140)
387 2vn8_A Reticulon-4-interacting 86.2 2.3 7.8E-05 36.1 7.7 98 29-146 181-280 (375)
388 3l4b_C TRKA K+ channel protien 85.8 2.8 9.5E-05 32.5 7.5 99 34-149 2-102 (218)
389 4fgs_A Probable dehydrogenase 85.8 6 0.00021 32.2 9.7 109 31-145 28-158 (273)
390 2g1u_A Hypothetical protein TM 85.7 2 6.7E-05 31.4 6.2 103 31-150 18-122 (155)
391 1zkd_A DUF185; NESG, RPR58, st 85.6 1.5 5.3E-05 37.7 6.2 59 18-76 67-133 (387)
392 3k31_A Enoyl-(acyl-carrier-pro 85.4 13 0.00045 30.1 11.8 111 31-145 29-167 (296)
393 3pvc_A TRNA 5-methylaminomethy 85.4 2.6 8.8E-05 39.0 8.1 123 31-158 58-222 (689)
394 4fn4_A Short chain dehydrogena 85.2 6.5 0.00022 31.6 9.5 82 31-115 6-94 (254)
395 3iyl_W VP1; non-enveloped viru 85.2 0.45 1.5E-05 46.1 2.8 114 17-145 815-932 (1299)
396 4g65_A TRK system potassium up 84.7 2.2 7.6E-05 37.6 7.0 101 32-148 3-104 (461)
397 3t4x_A Oxidoreductase, short c 84.2 4.1 0.00014 32.6 8.0 84 31-115 9-95 (267)
398 2hwk_A Helicase NSP2; rossman 84.2 0.54 1.9E-05 38.6 2.6 47 103-149 204-257 (320)
399 3v2g_A 3-oxoacyl-[acyl-carrier 83.9 15 0.0005 29.4 11.2 112 31-145 30-164 (271)
400 3gaz_A Alcohol dehydrogenase s 83.8 2.1 7.3E-05 35.8 6.3 94 29-145 148-245 (343)
401 3ps9_A TRNA 5-methylaminomethy 83.8 1.9 6.5E-05 39.8 6.4 123 31-158 66-230 (676)
402 2zwa_A Leucine carboxyl methyl 83.2 28 0.00097 32.1 19.0 166 31-244 107-313 (695)
403 3sx2_A Putative 3-ketoacyl-(ac 83.0 8.2 0.00028 30.9 9.4 83 31-116 12-113 (278)
404 4e6p_A Probable sorbitol dehyd 82.6 12 0.00042 29.5 10.2 79 31-115 7-92 (259)
405 3h7a_A Short chain dehydrogena 82.3 6.3 0.00021 31.2 8.3 81 31-115 6-93 (252)
406 3nx4_A Putative oxidoreductase 82.3 1.5 5.2E-05 36.2 4.7 90 34-145 149-240 (324)
407 1yqd_A Sinapyl alcohol dehydro 82.0 2 6.9E-05 36.4 5.5 96 29-145 184-281 (366)
408 2cf5_A Atccad5, CAD, cinnamyl 82.0 0.9 3.1E-05 38.4 3.3 95 29-145 177-274 (357)
409 3r3s_A Oxidoreductase; structu 81.9 12 0.00042 30.3 10.2 112 31-145 48-184 (294)
410 3is3_A 17BETA-hydroxysteroid d 81.8 16 0.00054 29.1 10.6 112 31-145 17-151 (270)
411 3gvc_A Oxidoreductase, probabl 81.5 13 0.00044 29.9 10.1 79 31-115 28-113 (277)
412 3edm_A Short chain dehydrogena 81.2 15 0.00051 29.1 10.2 112 31-145 7-142 (259)
413 2aef_A Calcium-gated potassium 81.0 5.5 0.00019 31.1 7.4 99 31-150 8-109 (234)
414 1wma_A Carbonyl reductase [NAD 80.9 15 0.0005 28.9 10.1 111 31-145 3-137 (276)
415 4f3n_A Uncharacterized ACR, CO 80.8 4.1 0.00014 35.5 7.0 45 32-76 138-188 (432)
416 3rkr_A Short chain oxidoreduct 80.7 12 0.0004 29.7 9.5 81 31-115 28-116 (262)
417 3swr_A DNA (cytosine-5)-methyl 80.6 1.4 4.6E-05 42.8 4.2 54 31-90 539-593 (1002)
418 3ek2_A Enoyl-(acyl-carrier-pro 80.3 20 0.00067 28.2 11.1 111 31-145 13-152 (271)
419 3tqh_A Quinone oxidoreductase; 80.0 5 0.00017 33.1 7.2 92 29-145 150-244 (321)
420 2gdz_A NAD+-dependent 15-hydro 79.7 18 0.00062 28.6 10.3 84 31-115 6-96 (267)
421 3f9i_A 3-oxoacyl-[acyl-carrier 79.6 6 0.00021 31.0 7.3 79 31-115 13-94 (249)
422 3lf2_A Short chain oxidoreduct 79.6 14 0.00047 29.3 9.6 84 31-115 7-97 (265)
423 4da9_A Short-chain dehydrogena 79.4 14 0.00047 29.7 9.6 82 31-115 28-117 (280)
424 3qiv_A Short-chain dehydrogena 79.2 7.8 0.00027 30.4 7.9 82 31-115 8-96 (253)
425 1boo_A Protein (N-4 cytosine-s 78.9 2.6 8.8E-05 35.2 5.0 63 83-149 15-87 (323)
426 3tjr_A Short chain dehydrogena 78.8 7.1 0.00024 31.9 7.7 82 31-115 30-118 (301)
427 3abi_A Putative uncharacterize 78.7 3.8 0.00013 34.6 6.1 70 31-113 15-85 (365)
428 1jw9_B Molybdopterin biosynthe 78.4 7.6 0.00026 31.0 7.5 79 31-113 30-129 (249)
429 3svt_A Short-chain type dehydr 77.9 20 0.0007 28.6 10.2 84 31-115 10-101 (281)
430 3ucx_A Short chain dehydrogena 77.7 14 0.00049 29.2 9.1 81 31-114 10-97 (264)
431 3ado_A Lambda-crystallin; L-gu 77.7 2.8 9.7E-05 35.0 4.9 98 32-145 6-122 (319)
432 3krt_A Crotonyl COA reductase; 77.7 6 0.00021 34.5 7.3 99 29-145 226-343 (456)
433 3lyl_A 3-oxoacyl-(acyl-carrier 77.6 11 0.00037 29.5 8.2 81 32-115 5-92 (247)
434 4ft4_B DNA (cytosine-5)-methyl 77.6 1.7 5.9E-05 40.9 3.9 54 31-90 211-270 (784)
435 3uve_A Carveol dehydrogenase ( 76.8 17 0.0006 29.0 9.5 82 31-115 10-114 (286)
436 4dcm_A Ribosomal RNA large sub 76.8 33 0.0011 29.0 12.5 110 22-149 27-139 (375)
437 3u5t_A 3-oxoacyl-[acyl-carrier 76.6 12 0.00042 29.8 8.4 112 31-145 26-160 (267)
438 3o38_A Short chain dehydrogena 76.5 21 0.00071 28.1 9.7 83 31-115 21-111 (266)
439 3ggo_A Prephenate dehydrogenas 76.4 18 0.0006 29.9 9.5 105 32-158 33-140 (314)
440 3t7c_A Carveol dehydrogenase; 75.7 19 0.00065 29.1 9.5 82 31-115 27-127 (299)
441 3nyw_A Putative oxidoreductase 75.5 11 0.00038 29.7 7.8 84 31-115 6-97 (250)
442 1lnq_A MTHK channels, potassiu 75.2 14 0.00046 30.6 8.5 98 32-150 115-215 (336)
443 3v8b_A Putative dehydrogenase, 75.2 18 0.00063 29.1 9.1 82 31-115 27-115 (283)
444 1xg5_A ARPG836; short chain de 75.1 29 0.001 27.5 12.1 83 31-115 31-121 (279)
445 4g81_D Putative hexonate dehyd 74.9 6.9 0.00024 31.4 6.4 112 31-145 8-144 (255)
446 2dpo_A L-gulonate 3-dehydrogen 74.6 5.7 0.0002 33.1 6.0 95 33-143 7-120 (319)
447 3pi7_A NADH oxidoreductase; gr 74.5 3.5 0.00012 34.5 4.7 95 30-145 162-262 (349)
448 1iy8_A Levodione reductase; ox 74.4 12 0.0004 29.7 7.7 84 31-115 12-102 (267)
449 3g0o_A 3-hydroxyisobutyrate de 74.1 20 0.00069 29.1 9.2 90 32-145 7-101 (303)
450 1ja9_A 4HNR, 1,3,6,8-tetrahydr 73.9 13 0.00046 29.2 8.0 80 31-114 20-108 (274)
451 1xa0_A Putative NADPH dependen 73.6 1.9 6.6E-05 35.7 2.9 97 29-145 146-245 (328)
452 3imf_A Short chain dehydrogena 73.4 19 0.00066 28.3 8.7 81 31-114 5-92 (257)
453 3gaf_A 7-alpha-hydroxysteroid 73.3 20 0.0007 28.2 8.9 82 31-115 11-99 (256)
454 3l77_A Short-chain alcohol deh 73.2 26 0.0009 26.9 9.4 82 32-115 2-90 (235)
455 1tt7_A YHFP; alcohol dehydroge 72.8 2.2 7.4E-05 35.4 3.0 95 29-145 147-246 (330)
456 3ctm_A Carbonyl reductase; alc 72.7 21 0.00072 28.3 8.9 81 31-115 33-121 (279)
457 3sju_A Keto reductase; short-c 72.5 13 0.00044 29.9 7.6 82 31-115 23-111 (279)
458 3dmg_A Probable ribosomal RNA 72.3 37 0.0013 28.8 10.7 107 23-150 37-143 (381)
459 4dkj_A Cytosine-specific methy 72.2 3.2 0.00011 35.9 3.9 44 32-75 10-59 (403)
460 4fs3_A Enoyl-[acyl-carrier-pro 72.1 34 0.0012 26.9 12.2 113 31-145 5-145 (256)
461 1g0o_A Trihydroxynaphthalene r 72.0 36 0.0012 27.1 10.5 111 31-145 28-162 (283)
462 3rku_A Oxidoreductase YMR226C; 72.0 23 0.00078 28.6 9.0 84 31-115 32-125 (287)
463 2a4k_A 3-oxoacyl-[acyl carrier 72.0 30 0.001 27.4 9.6 108 31-145 5-135 (263)
464 1hdc_A 3-alpha, 20 beta-hydrox 71.9 24 0.00081 27.7 8.9 79 31-115 4-89 (254)
465 3pgx_A Carveol dehydrogenase; 71.7 29 0.00099 27.6 9.6 82 31-115 14-115 (280)
466 3tfo_A Putative 3-oxoacyl-(acy 71.7 13 0.00046 29.6 7.4 81 32-115 4-91 (264)
467 3rd5_A Mypaa.01249.C; ssgcid, 70.9 15 0.00052 29.5 7.7 78 31-115 15-96 (291)
468 3ksu_A 3-oxoacyl-acyl carrier 70.6 37 0.0013 26.7 10.5 112 31-146 10-147 (262)
469 3gqv_A Enoyl reductase; medium 70.3 11 0.00038 31.8 6.9 96 30-145 163-262 (371)
470 3r1i_A Short-chain type dehydr 70.3 12 0.00039 30.2 6.8 82 31-115 31-119 (276)
471 4ibo_A Gluconate dehydrogenase 70.1 17 0.00058 29.0 7.7 82 31-115 25-113 (271)
472 1spx_A Short-chain reductase f 69.7 25 0.00085 27.9 8.7 82 32-115 6-96 (278)
473 4a0s_A Octenoyl-COA reductase/ 69.7 6 0.00021 34.3 5.2 44 29-72 218-263 (447)
474 3op4_A 3-oxoacyl-[acyl-carrier 69.2 28 0.00095 27.2 8.8 79 31-115 8-93 (248)
475 2rhc_B Actinorhodin polyketide 69.0 24 0.00081 28.2 8.4 81 31-115 21-109 (277)
476 3iht_A S-adenosyl-L-methionine 69.0 7.4 0.00025 29.0 4.6 108 29-145 38-146 (174)
477 3rih_A Short chain dehydrogena 68.8 21 0.00071 29.0 8.1 83 31-115 40-129 (293)
478 3av4_A DNA (cytosine-5)-methyl 68.5 4.5 0.00015 40.5 4.4 44 31-74 850-894 (1330)
479 3qha_A Putative oxidoreductase 68.2 22 0.00075 28.9 8.1 87 33-145 16-104 (296)
480 2h7i_A Enoyl-[acyl-carrier-pro 68.1 25 0.00086 27.8 8.4 109 31-145 6-147 (269)
481 1zem_A Xylitol dehydrogenase; 68.0 42 0.0014 26.3 9.8 81 31-115 6-94 (262)
482 4fc7_A Peroxisomal 2,4-dienoyl 68.0 37 0.0013 27.0 9.4 82 31-114 26-114 (277)
483 4dmm_A 3-oxoacyl-[acyl-carrier 67.9 17 0.00057 29.0 7.2 82 31-115 27-116 (269)
484 2ae2_A Protein (tropinone redu 67.8 22 0.00077 27.9 8.0 81 31-115 8-97 (260)
485 3trk_A Nonstructural polyprote 67.8 3.5 0.00012 33.5 2.9 45 103-147 209-260 (324)
486 3s55_A Putative short-chain de 67.8 40 0.0014 26.8 9.6 82 31-115 9-109 (281)
487 2hmt_A YUAA protein; RCK, KTN, 67.7 13 0.00043 26.0 5.9 100 32-149 6-107 (144)
488 3mag_A VP39; methylated adenin 67.5 5 0.00017 33.0 3.9 35 31-65 60-99 (307)
489 3ic5_A Putative saccharopine d 67.5 24 0.00083 23.4 8.0 72 32-114 5-78 (118)
490 1xkq_A Short-chain reductase f 67.4 37 0.0013 27.0 9.3 83 31-115 5-96 (280)
491 3l6e_A Oxidoreductase, short-c 67.3 35 0.0012 26.4 8.9 78 32-115 3-87 (235)
492 1yb1_A 17-beta-hydroxysteroid 67.1 28 0.00095 27.6 8.4 81 31-115 30-118 (272)
493 3n74_A 3-ketoacyl-(acyl-carrie 66.8 32 0.0011 26.9 8.7 79 31-115 8-93 (261)
494 1zud_1 Adenylyltransferase THI 66.7 34 0.0012 27.1 8.8 78 31-112 27-125 (251)
495 2ew2_A 2-dehydropantoate 2-red 66.6 30 0.001 27.8 8.7 96 33-145 4-107 (316)
496 3oec_A Carveol dehydrogenase ( 66.3 35 0.0012 27.9 9.1 82 31-115 45-145 (317)
497 1zcj_A Peroxisomal bifunctiona 66.1 41 0.0014 29.3 9.9 95 33-144 38-148 (463)
498 1w6u_A 2,4-dienoyl-COA reducta 66.0 49 0.0017 26.4 10.1 82 31-115 25-114 (302)
499 2qq5_A DHRS1, dehydrogenase/re 65.8 27 0.00092 27.4 8.0 78 32-113 5-91 (260)
500 4e12_A Diketoreductase; oxidor 65.8 7.1 0.00024 31.6 4.6 95 33-143 5-118 (283)
No 1
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=100.00 E-value=3.7e-32 Score=231.24 Aligned_cols=226 Identities=17% Similarity=0.248 Sum_probs=164.3
Q ss_pred CCCCCCcccchhhhhHhHHHHHHHHHhcC-------CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHH
Q 025754 2 SVLPIPRSELTHHRLYEFAKTALIKIYSH-------PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTW 74 (248)
Q Consensus 2 ~~~~~~r~~~~~~~~~~~~~~~li~~~~~-------~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~ 74 (248)
++|...|+++|++.++||+++.+|+.+++ ++.+|||||||+|.++..++..+..+|+|+|+|+.||+.|++++
T Consensus 12 ~~f~~~r~~~~~~~~nn~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~ 91 (302)
T 2vdw_A 12 SYFTNKRTRGPLGILSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY 91 (302)
T ss_dssp CCBCSSCCCHHHHHHHHHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH
T ss_pred chhccccccchHHHHHHHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH
Confidence 68999999999999999999999998875 37899999999999888887776669999999999999999998
Q ss_pred HhcCCC-----ceEEEEEcCCCCCchhhhhc--ccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 75 ENQRKN-----FIAEFFEADPCAENFETQMQ--EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 75 ~~~~~~-----~~~~~~~~d~~~~~~~~~~~--~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
...+.. +++.|.+.|+....+...+. .++++||+|+|.+++||++.+. +...+++++.++|||||+|+++++
T Consensus 92 ~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 92 NKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 764321 13678888886544322221 1357999999999999977654 457999999999999999999999
Q ss_pred ChhHHHHHHHHhHhhhhCCCCCCCCCCCCCcccCceeEEEecccCCCCCcceeeeE-EEEcc-CccCCCcceechHHHHH
Q 025754 148 DSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQ-LKFAN-DISAETQCLVHFPSLIR 225 (248)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~y~-~~l~~-~~~~~~e~lv~~~~l~~ 225 (248)
+...+...+.+. .+ ..+++....+.|. .+. .++..+. .+... ...++++|+|+++.|++
T Consensus 171 ~~~~~~~~~~~~--~~---------~i~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~ 231 (302)
T 2vdw_A 171 DGDKLSKLTDKK--TF---------IIHKNLPSSENYM-SVE-------KIADDRIVVYNPSTMSTPMTEYIIKKNDIVR 231 (302)
T ss_dssp CHHHHTTCCSCE--EE---------ECCSSSCTTTSEE-EEC-------EEETTEEEEBCTTTBSSCEEEECCCHHHHHH
T ss_pred CHHHHHHHHhcC--Cc---------cccccccccccee-eec-------cccccccceeeccccCCCceeeeeEHHHHHH
Confidence 987765322110 00 0112211111111 000 0011111 11112 24467889999999999
Q ss_pred HHHHcCcEEEEecCchHHHhhc
Q 025754 226 LAREAGLEYVEIQNLNEFYDDN 247 (248)
Q Consensus 226 ~~~~~G~~~v~~~~f~~~~~~~ 247 (248)
+++++||++++..+|.+||+.+
T Consensus 232 l~~~~Gl~lv~~~~f~~~~~~~ 253 (302)
T 2vdw_A 232 VFNEYGFVLVDNVDFATIIERS 253 (302)
T ss_dssp HHHHTTEEEEEEEEHHHHHHHH
T ss_pred HHHHCCCEEEEecChHHHHHHH
Confidence 9999999999999999999875
No 2
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.97 E-value=4.4e-29 Score=213.19 Aligned_cols=223 Identities=28% Similarity=0.517 Sum_probs=173.8
Q ss_pred cccchh-hhhHhHHHHHHHHHhcC-------CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcC-
Q 025754 8 RSELTH-HRLYEFAKTALIKIYSH-------PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR- 78 (248)
Q Consensus 8 r~~~~~-~~~~~~~~~~li~~~~~-------~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~- 78 (248)
.+.+.. +.++||+++.++..++. ++.+|||+|||+|.++..++..+..+++|+|+|+.|++.|+++....+
T Consensus 3 ~s~i~~lr~~~~~~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 82 (313)
T 3bgv_A 3 QSRIFYLRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKN 82 (313)
T ss_dssp --CTHHHHHHHHHHHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHS
T ss_pred cCcchhhhhccHHHHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhh
Confidence 344444 45889999988887754 778999999999999999987666699999999999999999876531
Q ss_pred -----CCceEEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHH
Q 025754 79 -----KNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (248)
Q Consensus 79 -----~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~ 153 (248)
...++.++++|+...++...+...+++||+|+|.+++|+++.+.++...+++++.++|+|||.+++++++.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~ 162 (313)
T 3bgv_A 83 RRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELI 162 (313)
T ss_dssp SSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHH
T ss_pred cccccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHH
Confidence 123589999999876521112112458999999999999778888899999999999999999999999998777
Q ss_pred HHHHHhHhhhhCCCCCCCCCCCCCcccCceeEEEecccCCCCCcceeeeEEEEccCccCCCcceechHHHHHHHHHcCcE
Q 025754 154 AKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLE 233 (248)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~G~~ 233 (248)
+.+.+. . ...+|+ ..|.+.|... ...+.++..|.|.+...+ ++++|+++++.+.++++++||+
T Consensus 163 ~~~~~~-------~----~~~~~~----~~~~~~f~~~-~~~~~~~~~~~f~l~~~~-~~~~~~~~~~~~~~l~~~~G~~ 225 (313)
T 3bgv_A 163 RRLEAS-------E----TESFGN----EIYTVKFQKK-GDYPLFGCKYDFNLEGVV-DVPEFLVYFPLLNEMAKKYNMK 225 (313)
T ss_dssp HHHTTS-------S----SSEEEC----SSEEEEESCS-SCCCSSCCEEEEEEC----CCEEECCCHHHHHHHGGGGTEE
T ss_pred HHHHhh-------c----cCccCC----eeEEEEeCCC-CCCCCccceEEEEECCcc-cCcceEEcHHHHHHHHHHcCcE
Confidence 655421 0 023454 3588878643 346788999999885443 6789999999999999999999
Q ss_pred EEEecCchHHHhhc
Q 025754 234 YVEIQNLNEFYDDN 247 (248)
Q Consensus 234 ~v~~~~f~~~~~~~ 247 (248)
++...+|..+++.+
T Consensus 226 ~v~~~~f~~~g~~~ 239 (313)
T 3bgv_A 226 LVYKKTFLEFYEEK 239 (313)
T ss_dssp EEEEEEHHHHHHHH
T ss_pred EEEecCHHHHHHHh
Confidence 99999999998765
No 3
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.96 E-value=1.8e-27 Score=201.06 Aligned_cols=209 Identities=27% Similarity=0.494 Sum_probs=175.6
Q ss_pred hhhHhHHHHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCC
Q 025754 14 HRLYEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE 93 (248)
Q Consensus 14 ~~~~~~~~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (248)
..+++|++..++..++.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+.
T Consensus 47 ~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 126 (298)
T 1ri5_A 47 RNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR 126 (298)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc
Confidence 45678999999888889999999999999999998887776699999999999999999987765445689999999776
Q ss_pred chhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHHHhHhhhhCCCCCCCCC
Q 025754 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPN 173 (248)
Q Consensus 94 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (248)
++. .+++||+|+|..++|+.+.+.++...+++++.++|+|||.+++++++...+...+.. .
T Consensus 127 ~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~--------------~ 187 (298)
T 1ri5_A 127 HMD-----LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQ--------------G 187 (298)
T ss_dssp CCC-----CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHH--------------T
T ss_pred ccC-----CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHcc--------------C
Confidence 541 257899999999999877889999999999999999999999999999887776652 1
Q ss_pred CCCCcccCceeEEEecccCCCCCc-ceeeeEEEEccCccCCCcceechHHHHHHHHHcCcEEEEecCchHHHhh
Q 025754 174 LVPNCIRSESYVITFEVEEEKFPL-FGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDD 246 (248)
Q Consensus 174 ~~g~~~~~~~~~~~~~~~~~~~~~-~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~G~~~v~~~~f~~~~~~ 246 (248)
.+++. .|++.++... ..|. +|..|.|.+.+.+....+++++++.+.++++++||+++....|..||..
T Consensus 188 ~~~~~----~~~~~~~~~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~~~ 256 (298)
T 1ri5_A 188 RMSND----FYKIELEKME-DVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFIDFYED 256 (298)
T ss_dssp CCBCS----SEEEECCCCS-SCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHHHHHHH
T ss_pred ccCCe----eEEEEeCccc-cccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHHHHHHH
Confidence 34443 5777776532 3344 8889999888877667788999999999999999999999999999875
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.85 E-value=2.2e-20 Score=155.48 Aligned_cols=113 Identities=21% Similarity=0.232 Sum_probs=97.6
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHc---CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhh
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~---~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (248)
.++..+++|+.+|||||||+|..+..++.. +..+|+|+|+|+.||+.|+++....+...+++++++|+.+.++
T Consensus 62 ~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~---- 137 (261)
T 4gek_A 62 MLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI---- 137 (261)
T ss_dssp HHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC----
T ss_pred HHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc----
Confidence 466777889999999999999999888765 2338999999999999999998876655679999999977543
Q ss_pred cccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+.||+|++.+++|+ .+.++...++++++++|||||.|++.
T Consensus 138 ----~~~d~v~~~~~l~~--~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 138 ----ENASMVVLNFTLQF--LEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp ----CSEEEEEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----cccccceeeeeeee--cCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 56999999999997 56777889999999999999999987
No 5
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.83 E-value=8.4e-20 Score=152.01 Aligned_cols=141 Identities=17% Similarity=0.127 Sum_probs=102.7
Q ss_pred CCCCcccchhhhhHhHHHHHHHHHh---cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCC-
Q 025754 4 LPIPRSELTHHRLYEFAKTALIKIY---SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK- 79 (248)
Q Consensus 4 ~~~~r~~~~~~~~~~~~~~~li~~~---~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~- 79 (248)
+..+|+..+...+.+|....+-+.+ ..++.+|||||||+|.++..++..+..+|+|+|+|+.|++.|+++......
T Consensus 25 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~ 104 (263)
T 2a14_A 25 YSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGA 104 (263)
T ss_dssp CCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTC
T ss_pred cCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCc
Confidence 3444444444346677766654443 236789999999999877766666666899999999999999886543210
Q ss_pred ---------------------------CceEE-EEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHH
Q 025754 80 ---------------------------NFIAE-FFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQN 131 (248)
Q Consensus 80 ---------------------------~~~~~-~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~ 131 (248)
...+. ++++|+.+...... ...++||+|++.+++|++..+.++...++++
T Consensus 105 ~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~--~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~ 182 (263)
T 2a14_A 105 YDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAP--AVLPLADCVLTLLAMECACCSLDAYRAALCN 182 (263)
T ss_dssp CCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTT--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHH
T ss_pred ccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCc--cccCCCCEeeehHHHHHhcCCHHHHHHHHHH
Confidence 01233 88999977422100 0246899999999999876777889999999
Q ss_pred HhccccCCcEEEEEe
Q 025754 132 VSSLLKPGGYFLGIT 146 (248)
Q Consensus 132 ~~~~LkpgG~~i~~~ 146 (248)
+.++|||||.|++..
T Consensus 183 i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 183 LASLLKPGGHLVTTV 197 (263)
T ss_dssp HHTTEEEEEEEEEEE
T ss_pred HHHHcCCCcEEEEEE
Confidence 999999999999974
No 6
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.80 E-value=1.4e-18 Score=145.99 Aligned_cols=119 Identities=18% Similarity=0.173 Sum_probs=97.1
Q ss_pred HHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccC
Q 025754 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
++..+..++.+|||||||+|..+..++..+. +++|+|+|+.+++.|+++....+...++.++++|+.+.+.. .+
T Consensus 61 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~ 134 (285)
T 4htf_A 61 VLAEMGPQKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH-----LE 134 (285)
T ss_dssp HHHHTCSSCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-----CS
T ss_pred HHHhcCCCCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-----cC
Confidence 3444455678999999999999999988755 99999999999999999987655445689999998665411 46
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
++||+|+|..+++++ ++...+++++.++|+|||.+++..++....
T Consensus 135 ~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 179 (285)
T 4htf_A 135 TPVDLILFHAVLEWV----ADPRSVLQTLWSVLRPGGVLSLMFYNAHGL 179 (285)
T ss_dssp SCEEEEEEESCGGGC----SCHHHHHHHHHHTEEEEEEEEEEEEBHHHH
T ss_pred CCceEEEECchhhcc----cCHHHHHHHHHHHcCCCeEEEEEEeCCchH
Confidence 899999999999883 235789999999999999999998887553
No 7
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.80 E-value=2.9e-19 Score=151.29 Aligned_cols=119 Identities=18% Similarity=0.126 Sum_probs=96.4
Q ss_pred HHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCC--ceEEEEEcCCCCCchhhhhcc
Q 025754 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN--FIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~ 101 (248)
++..+..++.+|||||||+|..+..++..+. +|+|+|+|+.|++.|+++....+.. .++.++++|+.+.++
T Consensus 75 ~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~------ 147 (299)
T 3g2m_A 75 FATRTGPVSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL------ 147 (299)
T ss_dssp HHHHHCCCCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC------
T ss_pred HHHhhCCCCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc------
Confidence 4444445556999999999999999988765 8999999999999999988754311 248999999977543
Q ss_pred cCCceeEEEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 102 KANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 102 ~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
+++||+|+|.. .+|+ .+.++...+++++.++|+|||.+++.+++....
T Consensus 148 -~~~fD~v~~~~~~~~~--~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 148 -DKRFGTVVISSGSINE--LDEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp -SCCEEEEEECHHHHTT--SCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred -CCCcCEEEECCccccc--CCHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 57899998764 4554 567788999999999999999999999988765
No 8
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.80 E-value=7.9e-19 Score=142.66 Aligned_cols=117 Identities=21% Similarity=0.266 Sum_probs=97.0
Q ss_pred HHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCC----CceEEEEEcCCCCCchhhhhc
Q 025754 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~ 100 (248)
+...++++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+. ..++.+.++|+...++
T Consensus 24 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----- 97 (235)
T 3sm3_A 24 IHNYLQEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF----- 97 (235)
T ss_dssp HHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS-----
T ss_pred HHHhCCCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC-----
Confidence 344567899999999999999999988755 999999999999999998765442 2257999999977655
Q ss_pred ccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
.+++||+|++..++++ +.+.+....+++++.++|+|||.+++..++.
T Consensus 98 -~~~~~D~v~~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 98 -HDSSFDFAVMQAFLTS-VPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp -CTTCEEEEEEESCGGG-CCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -CCCceeEEEEcchhhc-CCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 4688999999999997 3456667799999999999999999986644
No 9
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=6e-20 Score=152.41 Aligned_cols=119 Identities=14% Similarity=0.183 Sum_probs=93.2
Q ss_pred CCCCcccchhhhhHhHHHHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceE
Q 025754 4 LPIPRSELTHHRLYEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIA 83 (248)
Q Consensus 4 ~~~~r~~~~~~~~~~~~~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~ 83 (248)
|++-|+.+|. .+.+| +..+.+.+.+|||||||+|..+..++.... +|+|+|+|+.|++.|++. .++
T Consensus 18 Y~~~Rp~yp~-~l~~~-----l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~-------~~v 83 (257)
T 4hg2_A 18 YRAFRPRYPR-ALFRW-----LGEVAPARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH-------PRV 83 (257)
T ss_dssp --CCCCCCCH-HHHHH-----HHHHSSCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC-------TTE
T ss_pred HHHHCCCcHH-HHHHH-----HHHhcCCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc-------CCc
Confidence 5566776663 33344 334456678999999999999999977664 999999999999887532 238
Q ss_pred EEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 84 EFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 84 ~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
.+.++|+.+.++ ++++||+|+|..++|++ . ...+++++.++|||||.|++...
T Consensus 84 ~~~~~~~e~~~~------~~~sfD~v~~~~~~h~~-~----~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 84 TYAVAPAEDTGL------PPASVDVAIAAQAMHWF-D----LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EEEECCTTCCCC------CSSCEEEEEECSCCTTC-C----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeehhhhhhhcc------cCCcccEEEEeeehhHh-h----HHHHHHHHHHHcCCCCEEEEEEC
Confidence 999999988776 57899999999999972 2 45789999999999999988743
No 10
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.79 E-value=7.1e-18 Score=137.94 Aligned_cols=114 Identities=19% Similarity=0.262 Sum_probs=96.0
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++..+. +++|+|+|+.|++.|+++....+. ++.++++|+.+.++ +++||+
T Consensus 35 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-------~~~fD~ 104 (246)
T 1y8c_A 35 NLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNI-------NRKFDL 104 (246)
T ss_dssp TCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCC-------SCCEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCc-------cCCceE
Confidence 34788999999999999999987765 899999999999999998866442 48899999866443 378999
Q ss_pred EEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHH
Q 025754 109 VCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (248)
Q Consensus 109 V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~ 153 (248)
|++.. ++|+. .+.++...+++++.++|+|||.+++.+++...+.
T Consensus 105 v~~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 149 (246)
T 1y8c_A 105 ITCCLDSTNYI-IDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLS 149 (246)
T ss_dssp EEECTTGGGGC-CSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHH
T ss_pred EEEcCcccccc-CCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHH
Confidence 99998 99873 4567889999999999999999999999876543
No 11
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.78 E-value=7.3e-19 Score=140.85 Aligned_cols=110 Identities=15% Similarity=0.080 Sum_probs=88.9
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcC-----------CCceEEEEEcCCCCCchhh
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR-----------KNFIAEFFEADPCAENFET 97 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~ 97 (248)
.+++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++..... ...++.++++|+.+.++.
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~- 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR- 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH-
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc-
Confidence 46789999999999999999988776 99999999999999998754210 012489999999886652
Q ss_pred hhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
..++||+|++..++|+ .+.+....+++++.++|||||.+++.+
T Consensus 98 ----~~~~fD~v~~~~~l~~--l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 98 ----DIGHCAAFYDRAAMIA--LPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp ----HHHSEEEEEEESCGGG--SCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ----cCCCEEEEEECcchhh--CCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1168999999888887 456778889999999999999855543
No 12
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.78 E-value=3e-18 Score=141.34 Aligned_cols=106 Identities=18% Similarity=0.134 Sum_probs=91.4
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++... .++.++++|+.+.++ .+++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~------~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS----PVVCYEQKAIEDIAI------EPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC----TTEEEEECCGGGCCC------CTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhcc----CCeEEEEcchhhCCC------CCCCeEEEE
Confidence 7889999999999999999888766999999999999999988652 238999999866554 468999999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
|..++|+. ++...+++++.++|+|||.+++++++..
T Consensus 114 ~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 149 (253)
T 3g5l_A 114 SSLALHYI----ASFDDICKKVYINLKSSGSFIFSVEHPV 149 (253)
T ss_dssp EESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred Echhhhhh----hhHHHHHHHHHHHcCCCcEEEEEeCCCc
Confidence 99999984 3477899999999999999999988754
No 13
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.78 E-value=3.4e-17 Score=136.38 Aligned_cols=117 Identities=21% Similarity=0.231 Sum_probs=95.5
Q ss_pred HHHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc
Q 025754 22 TALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 22 ~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
..+++.. ..++.+|||||||+|..+..++.....+++|+|+|+.+++.|+++....+...++.+.++|+.+.++
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----- 125 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF----- 125 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-----
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC-----
Confidence 3444444 4578999999999999998887754459999999999999999988765544468999999977655
Q ss_pred ccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
++++||+|++..+++++ ++...+++++.++|+|||.+++..+.
T Consensus 126 -~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 126 -EDASFDAVWALESLHHM----PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp -CTTCEEEEEEESCTTTS----SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred -CCCCccEEEEechhhhC----CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 46799999999988873 23578999999999999999988543
No 14
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=7.2e-19 Score=140.29 Aligned_cols=144 Identities=14% Similarity=0.043 Sum_probs=112.8
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+. +++|+|+|+.|++.|+++.. ++.++++|+.+.++ .+++||+|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~------~~~~fD~v~ 107 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHP------SVTFHHGTITDLSD------SPKRWAGLL 107 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCT------TSEEECCCGGGGGG------SCCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCC------CCeEEeCccccccc------CCCCeEEEE
Confidence 378999999999999999988765 89999999999999998743 27899999866544 468999999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHHHhHhhhhCCCCCCCCCCCCCcccCceeEEEecc
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEV 190 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 190 (248)
+..++|+ .+.++...+++++.++|+|||.+++..++.... . .+..
T Consensus 108 ~~~~l~~--~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-------------------------------~--~~~~ 152 (203)
T 3h2b_A 108 AWYSLIH--MGPGELPDALVALRMAVEDGGGLLMSFFSGPSL-------------------------------E--PMYH 152 (203)
T ss_dssp EESSSTT--CCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSC-------------------------------E--EECC
T ss_pred ehhhHhc--CCHHHHHHHHHHHHHHcCCCcEEEEEEccCCch-------------------------------h--hhhc
Confidence 9999988 344568899999999999999999986654210 0 0100
Q ss_pred cCCCCCcceeeeEEEEccCccCCCcceechHHHHHHHHHcCcEEEEecCchH
Q 025754 191 EEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNE 242 (248)
Q Consensus 191 ~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~G~~~v~~~~f~~ 242 (248)
. ....+..+.+.+.++++++||+++....+..
T Consensus 153 ------------------~--~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 153 ------------------P--VATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp ------------------S--SSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred ------------------h--hhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 0 0123456889999999999999998776543
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.78 E-value=9.8e-19 Score=143.18 Aligned_cols=109 Identities=11% Similarity=0.124 Sum_probs=91.3
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||||||+|..+..++.... +++|+|+|+.+++.|+++... ++.++++|+.+. . .+++||+|
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~------~~~~fD~v 107 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-Q------LPRRYDNI 107 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-C------CSSCEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-C------cCCcccEE
Confidence 3678899999999999988877665 899999999999999988654 388999998654 2 36789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHh-ccccCCcEEEEEecChhHHHHH
Q 025754 110 CCFQHLQMCFETEERARRLLQNVS-SLLKPGGYFLGITPDSSTIWAK 155 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~-~~LkpgG~~i~~~~~~~~~~~~ 155 (248)
+|..++|++- +...+++++. ++|||||.++++.|+.......
T Consensus 108 ~~~~~l~~~~----~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~ 150 (250)
T 2p7i_A 108 VLTHVLEHID----DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQ 150 (250)
T ss_dssp EEESCGGGCS----SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHH
T ss_pred EEhhHHHhhc----CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHH
Confidence 9999999842 3578999999 9999999999999988655443
No 16
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.78 E-value=8.6e-18 Score=139.79 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=93.4
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||||||+|..+..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+.++ .+++||+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~i 118 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF------RNEELDLI 118 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------CTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC------CCCCEEEE
Confidence 578999999999999999998876669999999999999999998776654569999999977654 46799999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+|..++++. +...+++++.++|+|||.+++..+.
T Consensus 119 ~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 119 WSEGAIYNI-----GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EESSCGGGT-----CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEcCCceec-----CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 999999884 3678999999999999999998653
No 17
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.78 E-value=1.3e-17 Score=140.47 Aligned_cols=121 Identities=21% Similarity=0.243 Sum_probs=94.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCC---CceEEEEEcCCCCCchhhhhcccCCce
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK---NFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
.++.+|||||||+|..+..++..+. +|+|+|+|+.|++.|+++....+. ..++.+.++|+...+ ..+ ..+++|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~-~~~~~f 131 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD--KDV-PAGDGF 131 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH--HHS-CCTTCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc--ccc-ccCCCe
Confidence 4678999999999999999988876 999999999999999887533211 123678888875533 000 146799
Q ss_pred eEEEec-cchhhhcC---CHHHHHHHHHHHhccccCCcEEEEEecChhHHHH
Q 025754 107 DLVCCF-QHLQMCFE---TEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (248)
Q Consensus 107 D~V~~~-~~l~~~~~---~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~ 154 (248)
|+|+|. .+++++.. +.+....+++++.++|+|||+++++.++.+.+..
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 183 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILS 183 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHH
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHhh
Confidence 999998 78887432 2467889999999999999999999999877654
No 18
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.78 E-value=1.4e-17 Score=138.22 Aligned_cols=107 Identities=14% Similarity=0.225 Sum_probs=90.1
Q ss_pred HHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCC
Q 025754 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
+....+++.+|||||||+|..+..++..+. +++|+|+|+.+++.|+++.. ++.++++|+.+.++ ++
T Consensus 44 l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~ 109 (263)
T 3pfg_A 44 VRRHSPKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-------GR 109 (263)
T ss_dssp HHHHCTTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC-------SC
T ss_pred HHhhCCCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc-------cC
Confidence 334456779999999999999998877765 89999999999999998754 27899999977543 57
Q ss_pred ceeEEEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 105 QADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 105 ~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
+||+|+|.. ++++ +.+.++...+++++.++|+|||.+++..
T Consensus 110 ~fD~v~~~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 110 RFSAVTCMFSSIGH-LAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CEEEEEECTTGGGG-SCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CcCEEEEcCchhhh-cCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 899999998 8887 3445778899999999999999999973
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.77 E-value=2.5e-17 Score=136.44 Aligned_cols=106 Identities=17% Similarity=0.234 Sum_probs=88.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++.... +++|+|+|+.|++.|+++....+. .++.+.++|+.+.++ ++++||+
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l~~------~~~~fD~ 106 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQMPF------TDERFHI 106 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CCCS------CTTCEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhCCC------CCCCEEE
Confidence 34788999999999999888877665 999999999999999998765442 248999999987665 4689999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|+|..++|+. .+...+++++.++|+|||.+++..
T Consensus 107 V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 107 VTCRIAAHHF----PNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEhhhhHhc----CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999999984 235689999999999999999873
No 20
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.77 E-value=1.1e-17 Score=141.76 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=93.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||||||+|..+..++.. + .+|+|+|+|+.+++.|+++....+...++.+.++|+.+ + +++||
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-------~~~fD 139 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE--F-------DEPVD 139 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG--C-------CCCCS
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH--c-------CCCcc
Confidence 458889999999999999999887 6 59999999999999999998876655568999999843 2 57899
Q ss_pred EEEeccchhhhcC-----CHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 108 LVCCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 108 ~V~~~~~l~~~~~-----~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|++..++|++.. +.+....+++++.++|||||.+++..+..
T Consensus 140 ~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 140 RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred EEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 9999999998433 33667899999999999999999985543
No 21
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.77 E-value=1.1e-17 Score=140.51 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=90.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||||||+|..+..++.. +. +|+|+|+|+.+++.|+++....+...++.+.++|+.+ + +++||
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-------~~~fD 131 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ--F-------DEPVD 131 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG--C-------CCCCS
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh--C-------CCCee
Confidence 457889999999999999888744 54 9999999999999999998765544468999999732 2 37899
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|++..+++++ +.++...+++++.++|||||.+++..++.
T Consensus 132 ~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 132 RIVSIGAFEHF--GHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp EEEEESCGGGT--CTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred EEEEeCchhhc--ChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 99999999883 33567889999999999999999986654
No 22
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.77 E-value=5e-18 Score=139.78 Aligned_cols=107 Identities=18% Similarity=0.154 Sum_probs=91.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||||||+|..+..++.....+++|+|+|+.+++.|+++.... .++.++++|+...++ .+++||+|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~------~~~~fD~v 162 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATL------PPNTYDLI 162 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCC------CSSCEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCC------CCCCeEEE
Confidence 468899999999999998887765668999999999999999887543 348999999866554 46789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
++..++|+ .+.++...+++++.++|+|||.+++..+
T Consensus 163 ~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 163 VIQWTAIY--LTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhh--CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999998 4557789999999999999999999864
No 23
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.77 E-value=9.9e-18 Score=138.36 Aligned_cols=108 Identities=16% Similarity=0.113 Sum_probs=93.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
+++.+|||+|||+|..+..++.....+++|+|+|+.+++.|+++....+...++.++++|+.+.++ .+++||+|
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~fD~v 118 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF------QNEELDLI 118 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS------CTTCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC------CCCCEEEE
Confidence 478899999999999999998876559999999999999999998876655569999999977655 46899999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+|..++|+. +...+++++.++|+|||.+++..++
T Consensus 119 ~~~~~l~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 119 WSEGAIYNI-----GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp EEESCSCCC-----CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EecChHhhc-----CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 999999873 3678999999999999999998654
No 24
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.77 E-value=1.7e-17 Score=135.58 Aligned_cols=115 Identities=17% Similarity=0.237 Sum_probs=95.5
Q ss_pred HHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
...++++.+|||+|||+|..+..++.. .+++|+|+|+.+++.|+++....+ .++.+.++|+.+.++ +++
T Consensus 28 ~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~-------~~~ 96 (243)
T 3d2l_A 28 LEQVEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELEL-------PEP 96 (243)
T ss_dssp HHHSCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCC-------SSC
T ss_pred HHHcCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCC-------CCC
Confidence 345667899999999999998888776 599999999999999999876543 348899999865443 478
Q ss_pred eeEEEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 106 ADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 106 fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
||+|++.. ++++ +.+.++...+++++.++|+|||.+++.+++...+
T Consensus 97 fD~v~~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 143 (243)
T 3d2l_A 97 VDAITILCDSLNY-LQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKM 143 (243)
T ss_dssp EEEEEECTTGGGG-CCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred cCEEEEeCCchhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHH
Confidence 99999986 7877 3467788999999999999999999999887654
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.76 E-value=3.2e-18 Score=137.47 Aligned_cols=119 Identities=15% Similarity=0.065 Sum_probs=96.3
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc
Q 025754 21 KTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 21 ~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
...+++....++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+.++
T Consensus 33 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----- 107 (219)
T 3dlc_A 33 AENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI----- 107 (219)
T ss_dssp HHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS-----
T ss_pred HHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC-----
Confidence 344455544344499999999999999888774459999999999999999998776544569999999977655
Q ss_pred ccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
.+++||+|++..++|+. ++...+++++.++|+|||.+++..+..
T Consensus 108 -~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 108 -EDNYADLIVSRGSVFFW----EDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -CcccccEEEECchHhhc----cCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 46899999999999984 346789999999999999999985544
No 26
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.76 E-value=2.6e-18 Score=140.56 Aligned_cols=110 Identities=21% Similarity=0.304 Sum_probs=91.9
Q ss_pred HHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCC
Q 025754 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
+...++++.+|||||||+|..+..++..+. +++|+|+|+.+++.|+++... .++.++++|+.+.++ .++
T Consensus 47 l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~------~~~ 115 (242)
T 3l8d_A 47 FEQYVKKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGEG----PDLSFIKGDLSSLPF------ENE 115 (242)
T ss_dssp HHHHSCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTCB----TTEEEEECBTTBCSS------CTT
T ss_pred HHHHcCCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhccc----CCceEEEcchhcCCC------CCC
Confidence 344567889999999999999999988765 899999999999999877533 248999999977654 468
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+||+|++..++|+. ++...+++++.++|+|||.+++..++.
T Consensus 116 ~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 116 QFEAIMAINSLEWT----EEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp CEEEEEEESCTTSS----SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CccEEEEcChHhhc----cCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 99999999999873 345688999999999999999987654
No 27
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.76 E-value=7.6e-18 Score=139.48 Aligned_cols=115 Identities=17% Similarity=0.117 Sum_probs=91.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCC----------------------------c
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN----------------------------F 81 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~----------------------------~ 81 (248)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++....+.. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 367899999999999988887766568999999999999998887543210 1
Q ss_pred eE-EEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 82 IA-EFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 82 ~~-~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
++ .+.++|+.+...... ...++||+|+|..++|+...+.++...+++++.++|+|||.+++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGG--VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTT--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCc--cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 26 899999977543100 0227899999999999766677889999999999999999999875
No 28
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.76 E-value=4e-18 Score=139.13 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=88.8
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|+++....+...++.++++|+.+... ..+||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP-------TELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-------SSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-------CCCeeEEE
Confidence 456999999999999988866444 8999999999999999988654333458999999977442 56899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
+..++++ .+.++...+++++.++|+|||.+++...
T Consensus 138 ~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 138 DYVFFCA--IEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp EESSTTT--SCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EChhhhc--CCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 9999987 3556788999999999999999998643
No 29
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.76 E-value=1.5e-18 Score=142.26 Aligned_cols=147 Identities=20% Similarity=0.210 Sum_probs=111.5
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
+++.+|||||||+|..+..++..+. +++|+|+|+.+++.|+++ +.++++|+.+. .. +-.+++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~--~~--~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEY--LK--SLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHH--HH--TSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHH--hh--hcCCCCeeEE
Confidence 4788999999999999988887766 799999999999988765 56788876432 00 1146899999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHHHhHhhhhCCCCCCCCCCCCCcccCceeEEEec
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFE 189 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 189 (248)
+|..++++ .+.++...+++++.++|||||.+++.+++...+...... |
T Consensus 106 ~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-------------------------~----- 153 (240)
T 3dli_A 106 MISHFVEH--LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINF-------------------------Y----- 153 (240)
T ss_dssp EEESCGGG--SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHH-------------------------T-----
T ss_pred EECCchhh--CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHH-------------------------h-----
Confidence 99999998 345567899999999999999999998887554332210 0
Q ss_pred ccCCCCCcceeeeEEEEccCccCCCcceechHHHHHHHHHcCcEEEEecCchH
Q 025754 190 VEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNE 242 (248)
Q Consensus 190 ~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~G~~~v~~~~f~~ 242 (248)
.. ....+..+.+.+.++++++||+++....+..
T Consensus 154 ----------------~~----~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 186 (240)
T 3dli_A 154 ----------------ID----PTHKKPVHPETLKFILEYLGFRDVKIEFFEE 186 (240)
T ss_dssp ----------------TS----TTCCSCCCHHHHHHHHHHHTCEEEEEEEECC
T ss_pred ----------------cC----ccccccCCHHHHHHHHHHCCCeEEEEEEecc
Confidence 00 0012355779999999999999997766553
No 30
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.76 E-value=1.3e-17 Score=138.05 Aligned_cols=108 Identities=21% Similarity=0.189 Sum_probs=92.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++.....+|+|+|+|+.+++.|+++.... .++.++++|+.+.++ ++++||+|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~------~~~~fD~v 124 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEF------PENNFDLI 124 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCC------CTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCC------CCCcEEEE
Confidence 478899999999999999888763349999999999999999876543 248999999987655 46899999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
++..++|+ .+.++...+++++.++|+|||.+++..+.
T Consensus 125 ~~~~~l~~--~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 125 YSRDAILA--LSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp EEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eHHHHHHh--cChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99999998 45688999999999999999999998654
No 31
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.76 E-value=1.8e-17 Score=135.02 Aligned_cols=107 Identities=19% Similarity=0.260 Sum_probs=91.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++....+ ++.++++|+.+.++ .++||+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~-------~~~fD~ 112 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF-------EEKYDM 112 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC-------CSCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC-------CCCceE
Confidence 377899999999999999888773 4599999999999999998876543 58999999977654 378999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|++..++|+ .+.+....+++++.++|+|||.+++..+.
T Consensus 113 v~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 113 VVSALSIHH--LEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEeCcccc--CCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 999999998 46666778999999999999999998543
No 32
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.75 E-value=1.4e-17 Score=134.34 Aligned_cols=106 Identities=16% Similarity=0.107 Sum_probs=89.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++.. . ++.++++|+.+.++ . ++||+
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-~----~~~~~~~d~~~~~~------~-~~fD~ 109 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP-K----EFSITEGDFLSFEV------P-TSIDT 109 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC-T----TCCEESCCSSSCCC------C-SCCSE
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC-C----ceEEEeCChhhcCC------C-CCeEE
Confidence 34788999999999999999888755 99999999999999998865 2 37899999977554 3 78999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|+|..++|+ .+......+++++.++|+|||.+++..++.
T Consensus 110 v~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 110 IVSTYAFHH--LTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred EEECcchhc--CChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 999999998 455556679999999999999999996543
No 33
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=2.3e-17 Score=133.43 Aligned_cols=115 Identities=23% Similarity=0.273 Sum_probs=95.9
Q ss_pred HHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
...++++.+|||+|||+|..+..++.... +++|+|+|+.+++.|+++....+ .++.++++|+.+.++ .+++
T Consensus 33 ~~~~~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~------~~~~ 103 (227)
T 1ve3_A 33 MKYMKKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSF------EDKT 103 (227)
T ss_dssp HHSCCSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCS------CTTC
T ss_pred HHhcCCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCC------CCCc
Confidence 34456788999999999999988877766 99999999999999999876543 358999999877554 3578
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhH
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 151 (248)
||+|++..++++ .+..+...+++++.++|+|||.+++..++...
T Consensus 104 ~D~v~~~~~~~~--~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 147 (227)
T 1ve3_A 104 FDYVIFIDSIVH--FEPLELNQVFKEVRRVLKPSGKFIMYFTDLRE 147 (227)
T ss_dssp EEEEEEESCGGG--CCHHHHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred EEEEEEcCchHh--CCHHHHHHHHHHHHHHcCCCcEEEEEecChHH
Confidence 999999988655 45777889999999999999999999888644
No 34
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=2.7e-17 Score=132.49 Aligned_cols=114 Identities=17% Similarity=0.183 Sum_probs=92.9
Q ss_pred HHHHh-cCCCCeEEEEcCCCCccHhHHHHcC--CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc
Q 025754 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 24 li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~--~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
++... ..++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++....+.. ++.+.++|+.+.++
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~----- 102 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPL----- 102 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSS-----
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCC-----
Confidence 33443 4578899999999999999888763 359999999999999999988665432 48999999977554
Q ss_pred ccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
.+++||+|++..++|+. ++...+++++.++|+|||.+++..+.
T Consensus 103 -~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 103 -PDNTVDFIFMAFTFHEL----SEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp -CSSCEEEEEEESCGGGC----SSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CCCCeeEEEeehhhhhc----CCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 46789999999999873 24678999999999999999987433
No 35
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.75 E-value=2.4e-17 Score=138.79 Aligned_cols=127 Identities=16% Similarity=0.136 Sum_probs=89.4
Q ss_pred hHHHHHHHHHhc---CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCC---------------
Q 025754 18 EFAKTALIKIYS---HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK--------------- 79 (248)
Q Consensus 18 ~~~~~~li~~~~---~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~--------------- 79 (248)
.|....+.+.+. .++.+|||||||+|.....++.....+|+|+|+|+.|++.|+++......
T Consensus 55 ~~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~ 134 (289)
T 2g72_A 55 PWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIE 134 (289)
T ss_dssp HHHHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhc
Confidence 343444444432 26789999999999944433333445999999999999999886532100
Q ss_pred --------------CceEEEEEcCCCC-CchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEE
Q 025754 80 --------------NFIAEFFEADPCA-ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLG 144 (248)
Q Consensus 80 --------------~~~~~~~~~d~~~-~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 144 (248)
...+.++++|+.+ .++... ..++++||+|+|.+++|++....++...+++++.++|||||.|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 135 GKGECWQDKERQLRARVKRVLPIDVHQPQPLGAG-SPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp CSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSS-CSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CcccchhhhHHHHHhhhceEEecccCCCCCcccc-ccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 0014677889876 332110 003467999999999998666677899999999999999999998
Q ss_pred E
Q 025754 145 I 145 (248)
Q Consensus 145 ~ 145 (248)
.
T Consensus 214 ~ 214 (289)
T 2g72_A 214 I 214 (289)
T ss_dssp E
T ss_pred E
Confidence 7
No 36
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.75 E-value=3.4e-17 Score=139.41 Aligned_cols=109 Identities=16% Similarity=0.109 Sum_probs=93.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++.....+|+|+|+|+.+++.|+++....+...++.++++|+.+.++ .+++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF------DKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------CTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC------CCCCEeEE
Confidence 478899999999999999888762348999999999999999998776654569999999987665 46899999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
++..+++++ + ...+++++.++|+|||.+++..++.
T Consensus 190 ~~~~~l~~~--~---~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 190 WNNESTMYV--D---LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEESCGGGS--C---HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCchhhC--C---HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 999999983 2 8889999999999999999886543
No 37
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.75 E-value=4.2e-17 Score=139.01 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=91.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||||||+|..+..++.. +. +|+|+|+|+.+++.|+++....+...++.+.++|+.+ + +++||
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-------~~~fD 157 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED--F-------AEPVD 157 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG--C-------CCCCS
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH--C-------CCCcC
Confidence 357889999999999999888876 55 9999999999999999998766544458999999733 2 36899
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|++..++++ .+.++...+++++.++|+|||.+++..++.
T Consensus 158 ~v~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 158 RIVSIEAFEH--FGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp EEEEESCGGG--TCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred EEEEeChHHh--cCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 9999999988 334668899999999999999999986654
No 38
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.75 E-value=6.9e-17 Score=136.27 Aligned_cols=109 Identities=12% Similarity=0.009 Sum_probs=92.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||+|||+|..+..++.. +. +++|+|+|+.+++.|+++....+...++.++++|+.+.++ .+++||
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~fD 152 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC------EDNSYD 152 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS------CTTCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC------CCCCEe
Confidence 357889999999999999988876 54 9999999999999999988765544468999999987665 467899
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+|++..+++++- +...+++++.++|||||.++++.+.
T Consensus 153 ~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 153 FIWSQDAFLHSP----DKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEecchhhhcC----CHHHHHHHHHHHcCCCeEEEEEEec
Confidence 999999998842 2688999999999999999998654
No 39
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.75 E-value=7.5e-18 Score=138.10 Aligned_cols=109 Identities=12% Similarity=0.094 Sum_probs=90.5
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||||||+|..+..++.....+++|+|+|+.+++.|+++....+ ..++.++++|+...++ .+++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~------~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTP------EPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCC------CSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCC------CCCCEEEEE
Confidence 578999999999998888777655699999999999999999876542 2358899999866544 356899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+..++++ .+.+....+++++.++|+|||.+++..+.
T Consensus 152 ~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 152 IQWVIGH--LTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp EESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred Ecchhhh--CCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 9999998 45666789999999999999999997543
No 40
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.74 E-value=1.2e-16 Score=130.89 Aligned_cols=107 Identities=19% Similarity=0.242 Sum_probs=89.4
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++.... +++|+|+|+.+++.|+++....+. .++.+.++|+...++ .+++||+
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~------~~~~fD~ 90 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESLPF------PDDSFDI 90 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBCCS------CTTCEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccCCC------CCCcEEE
Confidence 56889999999999999988877665 999999999999999988765442 248899999876554 4679999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|+|..++|+.- +...++.++.++|+|||.+++..+
T Consensus 91 v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 91 ITCRYAAHHFS----DVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp EEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCchhhcc----CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99999998732 367899999999999999999744
No 41
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=5.5e-17 Score=132.57 Aligned_cols=106 Identities=23% Similarity=0.248 Sum_probs=89.9
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||||||+|..+..++..+..+++|+|+|+.+++.|+++.... ++.+.++|+...++ .+++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~d~~~~~~------~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT----GITYERADLDKLHL------PQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS----SEEEEECCGGGCCC------CTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC----CceEEEcChhhccC------CCCCceEEE
Confidence 78899999999999999888876559999999999999998876543 38899999866544 467899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+..++|+. ++...+++++.++|+|||.+++..++..
T Consensus 113 ~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 148 (243)
T 3bkw_A 113 SSLALHYV----EDVARLFRTVHQALSPGGHFVFSTEHPI 148 (243)
T ss_dssp EESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred Eecccccc----chHHHHHHHHHHhcCcCcEEEEEeCCcc
Confidence 99999873 2467899999999999999999988753
No 42
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.74 E-value=3.1e-17 Score=132.35 Aligned_cols=110 Identities=18% Similarity=0.212 Sum_probs=90.1
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHHHhcCCCc----eEEEEEcCCCCCchhhhhcccCC
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNF----IAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
.++.+|||+|||+|..+..++.... .+++|+|+|+.+++.|++++...+... ++.++++|+...+. ..+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~~~ 101 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK------RFS 101 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG------GGT
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc------ccC
Confidence 4678999999999999998887643 699999999999999999876543222 48999999865554 357
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+||+|+|..++++ .+.+....+++++.++|+|||+++ ++++
T Consensus 102 ~fD~V~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~~i-~~~~ 142 (219)
T 3jwg_A 102 GYDAATVIEVIEH--LDENRLQAFEKVLFEFTRPQTVIV-STPN 142 (219)
T ss_dssp TCSEEEEESCGGG--CCHHHHHHHHHHHHTTTCCSEEEE-EEEB
T ss_pred CCCEEEEHHHHHh--CCHHHHHHHHHHHHHhhCCCEEEE-Eccc
Confidence 8999999999998 467778899999999999999554 4555
No 43
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.74 E-value=1.7e-17 Score=133.09 Aligned_cols=103 Identities=18% Similarity=0.148 Sum_probs=88.0
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
++++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++. + +.+.++|+...+ .+++||+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~---~----~~~~~~d~~~~~-------~~~~fD~ 105 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL---G----RPVRTMLFHQLD-------AIDAYDA 105 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---T----SCCEECCGGGCC-------CCSCEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc---C----CceEEeeeccCC-------CCCcEEE
Confidence 45788999999999999999988755 9999999999999999886 2 567788875543 3689999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|+|..++++ .+.++...+++++.++|+|||.+++.++.
T Consensus 106 v~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 106 VWAHACLLH--VPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp EEECSCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEecCchhh--cCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999999998 45778899999999999999999998654
No 44
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.74 E-value=1.7e-17 Score=140.90 Aligned_cols=115 Identities=16% Similarity=0.126 Sum_probs=95.3
Q ss_pred HHhcCCCCeEEEEcCCCCccHhHHH--HcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccC
Q 025754 26 KIYSHPYVTVCDLYCGAGVDVDKWE--TALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~l~--~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
...+.++.+|||||||+|..+..++ ..+..+++|+|+|+.+++.|+++....+...++.++++|+.+.++ +
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~ 185 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT-------R 185 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC-------C
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc-------c
Confidence 4556789999999999999888874 334559999999999999999998766554569999999876554 3
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
++||+|++..++|+ +.+......+++++.++|+|||.+++....
T Consensus 186 ~~fD~v~~~~~~~~-~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 186 EGYDLLTSNGLNIY-EPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp SCEEEEECCSSGGG-CCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCeEEEEECChhhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 88999999998887 345667778999999999999999998544
No 45
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.73 E-value=3e-17 Score=131.51 Aligned_cols=124 Identities=18% Similarity=0.209 Sum_probs=101.4
Q ss_pred HHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccC
Q 025754 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
++..++.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++.... .++.+.++|+.+.++ .+
T Consensus 35 ~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~~i~~~~~d~~~~~~------~~ 105 (215)
T 2pxx_A 35 LLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV---PQLRWETMDVRKLDF------PS 105 (215)
T ss_dssp HHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC---TTCEEEECCTTSCCS------CS
T ss_pred HHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC---CCcEEEEcchhcCCC------CC
Confidence 345556788999999999999999998876668999999999999999887542 248899999977554 46
Q ss_pred CceeEEEeccchhhhc-----------CCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHH
Q 025754 104 NQADLVCCFQHLQMCF-----------ETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~-----------~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 156 (248)
++||+|++..+++++. .+......+++++.++|+|||.+++..++.......+
T Consensus 106 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 169 (215)
T 2pxx_A 106 ASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRH 169 (215)
T ss_dssp SCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHHHHHH
T ss_pred CcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHHHHHH
Confidence 7899999988887644 2256788999999999999999999999886665544
No 46
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.73 E-value=7.4e-17 Score=130.02 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=90.7
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCc----eEEEEEcCCCCCchhhhhcccCC
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNF----IAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
.++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|++++...+... ++.++++|+...+. ..+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~~~ 101 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK------RFH 101 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG------GGC
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc------cCC
Confidence 467899999999999999988764 3599999999999999999876543322 58999999865444 357
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+||+|+|..++++ .+.+....+++++.++|+|||++++ +++.
T Consensus 102 ~fD~v~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~li~-~~~~ 143 (217)
T 3jwh_A 102 GYDAATVIEVIEH--LDLSRLGAFERVLFEFAQPKIVIVT-TPNI 143 (217)
T ss_dssp SCSEEEEESCGGG--CCHHHHHHHHHHHHTTTCCSEEEEE-EEBH
T ss_pred CcCEEeeHHHHHc--CCHHHHHHHHHHHHHHcCCCEEEEE-ccCc
Confidence 8999999999998 4677789999999999999996555 4553
No 47
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.73 E-value=1e-16 Score=128.82 Aligned_cols=106 Identities=20% Similarity=0.124 Sum_probs=89.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|++ .. ..++.++++|+.+. + .+++||+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~--~~---~~~~~~~~~d~~~~-~------~~~~~D~ 110 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR--HG---LDNVEFRQQDLFDW-T------PDRQWDA 110 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG--GC---CTTEEEEECCTTSC-C------CSSCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh--cC---CCCeEEEecccccC-C------CCCceeE
Confidence 34678999999999999998888755 99999999999999987 22 12489999999765 3 4789999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|++..++|+ .+.+....+++++.++|+|||.+++..++.
T Consensus 111 v~~~~~l~~--~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 111 VFFAHWLAH--VPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEechhhc--CCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 999999998 456667899999999999999999997665
No 48
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.73 E-value=1.5e-16 Score=129.67 Aligned_cols=109 Identities=15% Similarity=0.222 Sum_probs=89.5
Q ss_pred HHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
....+++.+|||+|||+|..+..++.... +++|+|+|+.|++.|+++.. ++.++++|+.+.++ +++
T Consensus 35 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~~ 100 (239)
T 3bxo_A 35 RSRTPEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP------DATLHQGDMRDFRL-------GRK 100 (239)
T ss_dssp HHHCTTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT------TCEEEECCTTTCCC-------SSC
T ss_pred HHhcCCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC------CCEEEECCHHHccc-------CCC
Confidence 34446789999999999999998887755 89999999999999988753 27899999876443 568
Q ss_pred eeEEEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 106 ADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 106 fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
||+|+|.. ++|+ +.+.++...+++++.++|+|||.+++..++.
T Consensus 101 ~D~v~~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 101 FSAVVSMFSSVGY-LKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp EEEEEECTTGGGG-CCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CcEEEEcCchHhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 99999655 7776 3456788999999999999999999986544
No 49
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.73 E-value=1.5e-17 Score=137.60 Aligned_cols=108 Identities=13% Similarity=0.083 Sum_probs=87.7
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHh----------c------CCCceEEEEEcCCCCC
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWEN----------Q------RKNFIAEFFEADPCAE 93 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~----------~------~~~~~~~~~~~d~~~~ 93 (248)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.||+.|+++... . ....++.++++|+.+.
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4788999999999999999988877 999999999999999876531 0 0123589999999775
Q ss_pred chhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 94 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+.. ..++||+|++..++++ .+.+....+++++.++|||||++++.
T Consensus 146 ~~~-----~~~~FD~V~~~~~l~~--l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PRA-----NIGKFDRIWDRGALVA--INPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGG-----CCCCEEEEEESSSTTT--SCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred Ccc-----cCCCEEEEEEhhhhhh--CCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 541 1378999999888887 34566788999999999999999754
No 50
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.72 E-value=1.5e-16 Score=133.72 Aligned_cols=107 Identities=23% Similarity=0.342 Sum_probs=90.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
.++.+|||||||+|..+..++.. + ..+++|+|+|+.+++.|+++....+ .++.+.++|+.+.++ +++||
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~~~~-------~~~fD 91 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--YDSEFLEGDATEIEL-------NDKYD 91 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--SEEEEEESCTTTCCC-------SSCEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEcchhhcCc-------CCCee
Confidence 47889999999999999888776 2 3599999999999999999887654 269999999977554 46899
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|++..++++. .+...+++++.++|+|||.+++..++.
T Consensus 92 ~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 129 (284)
T 3gu3_A 92 IAICHAFLLHM----TTPETMLQKMIHSVKKGGKIICFEPHW 129 (284)
T ss_dssp EEEEESCGGGC----SSHHHHHHHHHHTEEEEEEEEEEECCH
T ss_pred EEEECChhhcC----CCHHHHHHHHHHHcCCCCEEEEEecch
Confidence 99999998873 235689999999999999999998883
No 51
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.72 E-value=6.8e-17 Score=129.99 Aligned_cols=108 Identities=20% Similarity=0.228 Sum_probs=92.5
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+ ++.++++|+.+.. .+++||+|+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~-------~~~~fD~v~ 119 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS-------TAELFDLIV 119 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC-------CSCCEEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC-------CCCCccEEE
Confidence 668999999999999998877764 99999999999999999876543 4899999997654 267899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
|..++|+ +.+.+....+++++.++|+|||.++++++...
T Consensus 120 ~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 158 (216)
T 3ofk_A 120 VAEVLYY-LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDA 158 (216)
T ss_dssp EESCGGG-SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred EccHHHh-CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 9999998 34467788999999999999999999877664
No 52
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=1e-16 Score=134.23 Aligned_cols=103 Identities=24% Similarity=0.270 Sum_probs=86.8
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||||||+|..+..++. ...+|+|+|+|+.|++.|+++.. ++.+.++|+...++ +++||+
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~~fD~ 120 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNYP------HLHFDVADARNFRV-------DKPLDA 120 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHCT------TSCEEECCTTTCCC-------SSCEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhCC------CCEEEECChhhCCc-------CCCcCE
Confidence 34788999999999999998887 44599999999999999988752 27789999876543 578999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|++..++|++. +...+++++.++|+|||.+++.+++.
T Consensus 121 v~~~~~l~~~~----d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 121 VFSNAMLHWVK----EPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEcchhhhCc----CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 99999999842 36689999999999999999997765
No 53
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.71 E-value=2.3e-16 Score=130.38 Aligned_cols=107 Identities=17% Similarity=0.122 Sum_probs=88.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++..+ .+++|+|+|+.|++.|+++... ...++.+.++|+.+.++ .+++||+
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~~d~~~~~~------~~~~fD~ 107 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAG--VDRKVQVVQADARAIPL------PDESVHG 107 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTT--SCTTEEEEESCTTSCCS------CTTCEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhc--cCCceEEEEcccccCCC------CCCCeeE
Confidence 4578899999999999999888775 4999999999999999988622 12348999999977654 4678999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|++..++|+.- +...+++++.++|+|||.+++..++
T Consensus 108 v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 108 VIVVHLWHLVP----DWPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp EEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCchhhcC----CHHHHHHHHHHHCCCCcEEEEEecC
Confidence 99999999832 4678999999999999999988443
No 54
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.71 E-value=1.1e-16 Score=127.49 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=89.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
++++ +|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+. ++.+.++|+.+.++ .+++||+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~------~~~~fD~ 97 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDI------VADAWEG 97 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSC------CTTTCSE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCC------CcCCccE
Confidence 4566 999999999999988877765 999999999999999998866542 48899999877654 4678999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
|++.+ .| .+.++...+++++.++|+|||.+++..++..
T Consensus 98 v~~~~-~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 98 IVSIF-CH---LPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp EEEEC-CC---CCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred EEEEh-hc---CCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 99854 22 3677899999999999999999999877653
No 55
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.71 E-value=3.3e-16 Score=130.68 Aligned_cols=110 Identities=22% Similarity=0.277 Sum_probs=91.2
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||||||+|..+..++... ..+++|+|+|+.+++.|+++....+. .++.++++|+...++ .+++||
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~------~~~~fD 107 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSLPF------EDSSFD 107 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGCCS------CTTCEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccCCC------CCCCee
Confidence 3588999999999999998888773 45999999999999999998876543 248999999876554 468999
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|++..+++++- +...+++++.++|+|||.+++..++.
T Consensus 108 ~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 108 HIFVCFVLEHLQ----SPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp EEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred EEEEechhhhcC----CHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999999998732 24589999999999999999986543
No 56
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.71 E-value=5.9e-17 Score=133.57 Aligned_cols=109 Identities=20% Similarity=0.213 Sum_probs=90.9
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++.....+++|+|+|+.|++.|+++....+...++.+.++|+.+.++ +++||+
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD~ 106 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-------NEKCDV 106 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-------SSCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-------CCCCCE
Confidence 4588999999999999998887764448999999999999999988765544458999999976543 578999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|+|..++|+.- +...+++++.++|||||.+++..+.
T Consensus 107 V~~~~~~~~~~----~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 107 AACVGATWIAG----GFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp EEEESCGGGTS----SSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred EEECCChHhcC----CHHHHHHHHHHHcCCCeEEEEecCc
Confidence 99999888732 3678999999999999999998653
No 57
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=1.8e-16 Score=130.49 Aligned_cols=121 Identities=26% Similarity=0.369 Sum_probs=94.0
Q ss_pred hHHHHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh
Q 025754 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (248)
Q Consensus 18 ~~~~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (248)
.|+...+-....+++.+|||+|||+|..+..++..+. +++|+|+|+.|++.|+++....+ .++.++++|+.+.++
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~-- 102 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERN--LKIEFLQGDVLEIAF-- 102 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEESCGGGCCC--
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcC--CceEEEECChhhccc--
Confidence 3444333222234678999999999999999888765 89999999999999999876554 248899999866443
Q ss_pred hhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+++||+|+|.++.+.. .+.++...+++++.++|+|||.+++.+++.
T Consensus 103 -----~~~fD~v~~~~~~~~~-~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 148 (252)
T 1wzn_A 103 -----KNEFDAVTMFFSTIMY-FDEEDLRKLFSKVAEALKPGGVFITDFPCW 148 (252)
T ss_dssp -----CSCEEEEEECSSGGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEEC-
T ss_pred -----CCCccEEEEcCCchhc-CCHHHHHHHHHHHHHHcCCCeEEEEeccch
Confidence 4689999987543322 457788999999999999999999988874
No 58
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.70 E-value=1.2e-16 Score=129.23 Aligned_cols=111 Identities=20% Similarity=0.264 Sum_probs=88.7
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC--Cchhhhhc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQ 100 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~ 100 (248)
.+++....++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.++++. ..+.++|+.+ .++
T Consensus 24 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~----- 89 (230)
T 3cc8_A 24 NLLKHIKKEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY----- 89 (230)
T ss_dssp HHHTTCCTTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS-----
T ss_pred HHHHHhccCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC-----
Confidence 3444333578899999999999999888775 69999999999999887653 2578899865 222
Q ss_pred ccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
.+++||+|++..++++.- +...+++++.++|+|||.+++++|+....
T Consensus 90 -~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 136 (230)
T 3cc8_A 90 -EEEQFDCVIFGDVLEHLF----DPWAVIEKVKPYIKQNGVILASIPNVSHI 136 (230)
T ss_dssp -CTTCEEEEEEESCGGGSS----CHHHHHHHTGGGEEEEEEEEEEEECTTSH
T ss_pred -CCCccCEEEECChhhhcC----CHHHHHHHHHHHcCCCCEEEEEeCCcchH
Confidence 357899999999998732 24689999999999999999999887543
No 59
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=1.3e-16 Score=125.34 Aligned_cols=124 Identities=10% Similarity=0.030 Sum_probs=90.5
Q ss_pred HhHHHHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchh
Q 025754 17 YEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (248)
Q Consensus 17 ~~~~~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (248)
..+++. ++...+.++.+|||+|||+|..+..++.. ..+|+|+|+|+.|++.|+++....+. .++.+++.|......
T Consensus 9 ~~~~~~-~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~- 84 (185)
T 3mti_A 9 IHMSHD-FLAEVLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDH- 84 (185)
T ss_dssp HHHHHH-HHHTTCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGG-
T ss_pred HHHHHH-HHHHhCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHh-
Confidence 344443 34556778999999999999999999877 55999999999999999998876553 458888866533211
Q ss_pred hhhcccCCceeEEEeccchhh-----hcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 97 TQMQEKANQADLVCCFQHLQM-----CFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~-----~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
. .+++||+|++...... .....+....+++++.++|||||.+++....
T Consensus 85 -~---~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 85 -Y---VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp -T---CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred -h---ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 1 3578999987632211 1114466778999999999999999988554
No 60
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.70 E-value=2.7e-16 Score=124.18 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=90.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++....+. .++.++++|+.+... .. .+++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~--~~--~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVA--AG--TTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHH--HC--CSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHh--hc--cCCCccEE
Confidence 57889999999999998877777777899999999999999998876553 358999999744211 11 25789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhc--cccCCcEEEEEecCh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPDS 149 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~--~LkpgG~~i~~~~~~ 149 (248)
++....++ ..+....+++.+.+ +|+|||.+++..+..
T Consensus 118 ~~~~p~~~---~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 118 LADPPYNV---DSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp EECCCTTS---CHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred EECCCCCc---chhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 99876554 35678899999998 999999999986654
No 61
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.6e-16 Score=134.41 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=90.0
Q ss_pred cCCCCeEEEEcCCCCccHhHHHH--cCCCeEEEEeCChHHHHHHHHHHHhc-CCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWET--ALIANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~--~~~~~v~giDis~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
..++.+|||||||+|..+..++. .+..+|+|+|+|+.+++.|+++.... +...++.++++|+.+.++........++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 45789999999999999999986 35569999999999999999987664 2234599999999876652100001279
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
||+|+|..++|+. +...+++++.++|+|||.+++.
T Consensus 114 fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 114 IDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEEE
Confidence 9999999999984 4788999999999999999883
No 62
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.69 E-value=1.7e-16 Score=126.88 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=90.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++.....+++|+|+|+.|++.|+++....+ .++.+.++|+.+.++ ++++||+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~------~~~~fD~ 92 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPF------KDESMSF 92 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCS------CTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCC------CCCceeE
Confidence 45788999999999998544434333499999999999999998876543 247889999977654 4678999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|++..++|+ .+.++...+++++.++|+|||.+++..++.
T Consensus 93 v~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 93 VYSYGTIFH--MRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp EEECSCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EEEcChHHh--CCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 999998887 357789999999999999999999986653
No 63
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=5e-17 Score=132.88 Aligned_cols=113 Identities=16% Similarity=0.007 Sum_probs=88.3
Q ss_pred HHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCC--chhhhhcccC
Q 025754 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE--NFETQMQEKA 103 (248)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~ 103 (248)
.....++.+|||||||+|..+..++..+..+++|+|+|+.|++.|+++....+ .++.++++|+.+. ++ .+
T Consensus 55 ~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~------~~ 126 (236)
T 1zx0_A 55 AAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL------PD 126 (236)
T ss_dssp HHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS------CT
T ss_pred hhcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhccc------CC
Confidence 33456788999999999999988876666689999999999999999876544 4689999998553 33 46
Q ss_pred CceeEEEe-ccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 104 NQADLVCC-FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 104 ~~fD~V~~-~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
++||+|++ .+.++...........+++++.++|||||+|++..
T Consensus 127 ~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 127 GHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 78999998 55432222345567788999999999999998763
No 64
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.69 E-value=3.7e-16 Score=131.73 Aligned_cols=114 Identities=14% Similarity=0.137 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCCCccHhH----HHHc-CCCe--EEEEeCChHHHHHHHHHHHhcCC--CceEEEEEcCCCCCchhhhh--
Q 025754 31 PYVTVCDLYCGAGVDVDK----WETA-LIAN--YIGIDVATSGIGEARDTWENQRK--NFIAEFFEADPCAENFETQM-- 99 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~----l~~~-~~~~--v~giDis~~~l~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~-- 99 (248)
++.+|||||||+|..+.. ++.. +... ++|+|+|+.|++.|+++...... ..++.+.++++. ++...+
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS--EYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH--HHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh--hhhhhhcc
Confidence 567999999999975433 3222 2233 49999999999999998764311 112334444432 221100
Q ss_pred cccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
...+++||+|+|..++|++ ++...++++++++|||||.+++..++.+
T Consensus 130 ~~~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 176 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYV----KDIPATLKFFHSLLGTNAKMLIIVVSGS 176 (292)
T ss_dssp TTCCCCEEEEEEESCGGGC----SCHHHHHHHHHHTEEEEEEEEEEEECTT
T ss_pred ccCCCceeEEEEeeeeeec----CCHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 0136789999999999983 2467899999999999999999866543
No 65
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.68 E-value=1.6e-16 Score=128.20 Aligned_cols=106 Identities=24% Similarity=0.236 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++ . .+.+.++|+.+... .......+||+|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~----~~~~~~~~~~~~~~--~~~~~~~~fD~v 120 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA---G----AGEVHLASYAQLAE--AKVPVGKDYDLI 120 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT---C----SSCEEECCHHHHHT--TCSCCCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh---c----ccccchhhHHhhcc--cccccCCCccEE
Confidence 4679999999999999988887755 899999999999999877 1 25677877644210 011134569999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+|..++| . .+...+++++.++|+|||.+++..++..
T Consensus 121 ~~~~~l~-~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 121 CANFALL-H----QDIIELLSAMRTLLVPGGALVIQTLHPW 156 (227)
T ss_dssp EEESCCC-S----SCCHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EECchhh-h----hhHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 9998887 2 2356899999999999999999988753
No 66
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.68 E-value=2.8e-15 Score=124.89 Aligned_cols=117 Identities=13% Similarity=0.033 Sum_probs=87.7
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHc-CC-CeEEEEeCChH------HHHHHHHHHHhcCCCceEEEEEcC-CCC
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATS------GIGEARDTWENQRKNFIAEFFEAD-PCA 92 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~-~~-~~v~giDis~~------~l~~a~~~~~~~~~~~~~~~~~~d-~~~ 92 (248)
.++... ..++.+|||||||+|..+..++.. +. .+++|+|+|+. +++.|++++...+...++.+.++| ...
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD 113 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh
Confidence 344444 568899999999999999988876 33 59999999998 999999988765443468999998 322
Q ss_pred CchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 93 ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 93 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
..+ +-.+++||+|++..++|+. ... ..+++.+.++++|||.+++...
T Consensus 114 ~~~----~~~~~~fD~v~~~~~l~~~-~~~---~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 114 DLG----PIADQHFDRVVLAHSLWYF-ASA---NALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp CCG----GGTTCCCSEEEEESCGGGS-SCH---HHHHHHHHHHTTTCSEEEEEEE
T ss_pred ccC----CCCCCCEEEEEEccchhhC-CCH---HHHHHHHHHHhCCCCEEEEEEe
Confidence 221 1136789999999999873 333 3467777777888999999844
No 67
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.68 E-value=3.5e-16 Score=125.34 Aligned_cols=115 Identities=19% Similarity=0.255 Sum_probs=93.2
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
.++..+..++.+|||+|||+|..+..+ +..+++|+|+|+.|++.|+++. . ++.++++|+.+.++ .
T Consensus 28 ~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~--~----~~~~~~~d~~~~~~------~ 92 (211)
T 2gs9_A 28 RALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA--P----EATWVRAWGEALPF------P 92 (211)
T ss_dssp HHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC--T----TSEEECCCTTSCCS------C
T ss_pred HHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC--C----CcEEEEcccccCCC------C
Confidence 445566668899999999999877666 4448999999999999998876 1 27889999877654 4
Q ss_pred CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHH
Q 025754 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 156 (248)
+++||+|++..++|+.- +...+++++.++|+|||.++++.++....+...
T Consensus 93 ~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~ 142 (211)
T 2gs9_A 93 GESFDVVLLFTTLEFVE----DVERVLLEARRVLRPGGALVVGVLEALSPWAAL 142 (211)
T ss_dssp SSCEEEEEEESCTTTCS----CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHH
T ss_pred CCcEEEEEEcChhhhcC----CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHH
Confidence 67899999999988732 467899999999999999999988876555443
No 68
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=6.7e-16 Score=121.52 Aligned_cols=112 Identities=17% Similarity=0.177 Sum_probs=94.1
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
.++..+++++.+|||+|||+|..+..++..+. +++|+|+|+.+++.++++... +.++++|+.+.++ +
T Consensus 38 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~~------~~~~~~d~~~~~~------~ 104 (195)
T 3cgg_A 38 RLIDAMAPRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFPE------ARWVVGDLSVDQI------S 104 (195)
T ss_dssp HHHHHHSCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTT------SEEEECCTTTSCC------C
T ss_pred HHHHHhccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCCC------CcEEEcccccCCC------C
Confidence 46677788899999999999999998887754 999999999999999887532 7789999877554 3
Q ss_pred CCceeEEEec-cchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 103 ANQADLVCCF-QHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 103 ~~~fD~V~~~-~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+++||+|++. ..+|+ .+.+....+++++.++|+|||.+++..++.
T Consensus 105 ~~~~D~i~~~~~~~~~--~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGF--LAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCCEEEEEECCCCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CCceeEEEECCcHHhh--cChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 6789999998 56766 456778999999999999999999987654
No 69
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=4.8e-16 Score=123.27 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=94.0
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
.++.....++.+|||+|||+|..+..++.. +.++++|+|+|+.+++.|+++....+...++.++++|+.+... .
T Consensus 14 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-- 89 (197)
T 3eey_A 14 DYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK--Y-- 89 (197)
T ss_dssp HHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG--T--
T ss_pred HHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh--h--
Confidence 344556778999999999999999888776 4459999999999999999998775543468999999855321 1
Q ss_pred ccCCceeEEEeccch-----hhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 101 EKANQADLVCCFQHL-----QMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l-----~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
.+++||+|++...+ +......+....+++++.++|+|||.+++....
T Consensus 90 -~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 90 -IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp -CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 35789999987644 222344556778999999999999999988543
No 70
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.67 E-value=8.3e-16 Score=124.12 Aligned_cols=146 Identities=16% Similarity=0.200 Sum_probs=107.6
Q ss_pred HHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCC
Q 025754 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
+....+ +.+|||+|||+|..+..++.. +|+|+|+.+++.++++ + +.+.++|+...++ .++
T Consensus 42 l~~~~~-~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~----~----~~~~~~d~~~~~~------~~~ 101 (219)
T 1vlm_A 42 VKCLLP-EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR----G----VFVLKGTAENLPL------KDE 101 (219)
T ss_dssp HHHHCC-SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT----T----CEEEECBTTBCCS------CTT
T ss_pred HHHhCC-CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc----C----CEEEEcccccCCC------CCC
Confidence 334444 889999999999998877543 9999999999998876 2 7789999876554 467
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHHHhHhhhhCCCCCCCCCCCCCcccCcee
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESY 184 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 184 (248)
+||+|++..++++. ++...+++++.++|+|||.+++..++....+....... ..
T Consensus 102 ~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~----~~------------------ 155 (219)
T 1vlm_A 102 SFDFALMVTTICFV----DDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKN----KE------------------ 155 (219)
T ss_dssp CEEEEEEESCGGGS----SCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT----TT------------------
T ss_pred CeeEEEEcchHhhc----cCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH----hc------------------
Confidence 89999999999873 23578999999999999999999887654443332110 00
Q ss_pred EEEecccCCCCCcceeeeEEEEccCccCCCcceechHHHHHHHHHcCcEEEEecC
Q 025754 185 VITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQN 239 (248)
Q Consensus 185 ~~~~~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~G~~~v~~~~ 239 (248)
+..+ .......+.+.+.++++++||+++....
T Consensus 156 --------------~~~~---------~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 156 --------------KSVF---------YKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp --------------C-CC---------STTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred --------------Ccch---------hcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 0000 0012356889999999999999987654
No 71
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.67 E-value=2.1e-16 Score=138.29 Aligned_cols=110 Identities=21% Similarity=0.188 Sum_probs=88.9
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhc-----C--CCceEEEEEcCCCCC------
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-----R--KNFIAEFFEADPCAE------ 93 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~-----~--~~~~~~~~~~d~~~~------ 93 (248)
..++.+|||||||+|..+..++.. +..+|+|+|+|+.|++.|+++.... + ...++.++++|+.+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 347889999999999998888775 3459999999999999999876532 1 113589999999774
Q ss_pred chhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 94 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
++ ++++||+|++..++|+. .+...+++++.++|||||.+++..+.
T Consensus 161 ~~------~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 161 GV------PDSSVDIVISNCVCNLS----TNKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CC------CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CC------CCCCEEEEEEccchhcC----CCHHHHHHHHHHHcCCCCEEEEEEec
Confidence 33 46799999999999973 23678999999999999999997543
No 72
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.67 E-value=5.8e-16 Score=136.82 Aligned_cols=150 Identities=19% Similarity=0.276 Sum_probs=107.1
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||||||+|..+..++..+. +++|+|+|+.|++.|+++ + +....... .......++..+++||+
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~----~~~~~~~~-~~~~~~~l~~~~~~fD~ 174 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----G----IRVRTDFF-EKATADDVRRTEGPANV 174 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----T----CCEECSCC-SHHHHHHHHHHHCCEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----C----CCcceeee-chhhHhhcccCCCCEEE
Confidence 34788999999999999999988766 999999999999998876 1 11222111 11111112223589999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHHHhHhhhhCCCCCCCCCCCCCcccCceeEEEe
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITF 188 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 188 (248)
|++..++|++ ++...+++++.++|||||++++.+|+...+.... .|..
T Consensus 175 I~~~~vl~h~----~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-----------------~~~~----------- 222 (416)
T 4e2x_A 175 IYAANTLCHI----PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKT-----------------SFDQ----------- 222 (416)
T ss_dssp EEEESCGGGC----TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHT-----------------CGGG-----------
T ss_pred EEECChHHhc----CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhc-----------------chhh-----------
Confidence 9999999983 3588999999999999999999999876543211 0100
Q ss_pred cccCCCCCcceeeeEEEEccCccCCCcceechHHHHHHHHHcCcEEEEecCch
Q 025754 189 EVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLN 241 (248)
Q Consensus 189 ~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~G~~~v~~~~f~ 241 (248)
.| ....+..+.+.+.++++++||+++....+.
T Consensus 223 ------------~~---------~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 223 ------------IF---------DEHFFLFSATSVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp ------------CS---------TTCCEECCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred ------------hh---------hhhhhcCCHHHHHHHHHHcCCEEEEEEEcc
Confidence 00 001124578899999999999999877654
No 73
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.66 E-value=4e-16 Score=130.94 Aligned_cols=104 Identities=20% Similarity=0.187 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|+++....+. ++.++++|+.+..+ +++||+|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-------~~~fD~i~ 189 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-------QENYDFIV 189 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-------CSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-------cCCccEEE
Confidence 788999999999999999988866 999999999999999998876653 58999999865443 57899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
+..++|+ .+.+....+++++.++|+|||.+++..
T Consensus 190 ~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 190 STVVFMF--LNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp ECSSGGG--SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Eccchhh--CCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999997 456678899999999999999977763
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.66 E-value=3e-16 Score=132.40 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=90.7
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCC------------------------------
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRK------------------------------ 79 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~------------------------------ 79 (248)
++.+|||||||+|..+..++.. +..+|+|+|+|+.|++.|+++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999988876 456999999999999999886543210
Q ss_pred ---------------------------CceEEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhc--CCHHHHHHHHH
Q 025754 80 ---------------------------NFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCF--ETEERARRLLQ 130 (248)
Q Consensus 80 ---------------------------~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--~~~~~~~~~l~ 130 (248)
..++.|.++|+...... ..+...++||+|+|..+++|+. .+.+....+++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~-~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDD-LVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHH-HHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccc-cccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 13589999998764411 1111367899999999986632 14557889999
Q ss_pred HHhccccCCcEEEEEecChh
Q 025754 131 NVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 131 ~~~~~LkpgG~~i~~~~~~~ 150 (248)
++.++|+|||+|++...+..
T Consensus 205 ~~~~~LkpGG~lil~~~~~~ 224 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWS 224 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHH
T ss_pred HHHHHhCCCcEEEEecCCch
Confidence 99999999999999866654
No 75
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.66 E-value=4.7e-16 Score=127.34 Aligned_cols=117 Identities=17% Similarity=-0.007 Sum_probs=88.6
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
.+.+....+|.+|||||||+|..+..++.....+++|+|+|+.+++.|+++....+ .++.++++|+..... ...
T Consensus 52 ~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~----~~~ 125 (236)
T 3orh_A 52 ALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAP----TLP 125 (236)
T ss_dssp HHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGG----GSC
T ss_pred HHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcc----ccc
Confidence 34444567899999999999998888877766799999999999999999876654 357788888633111 114
Q ss_pred CCceeEEEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+++||.|+... ...+...+..+...+++++.++|||||+|++.
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 67899997532 11223345677899999999999999999875
No 76
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.66 E-value=9.6e-16 Score=121.31 Aligned_cols=105 Identities=19% Similarity=0.127 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+. .++.+.++|+.+.++ +++||+|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~-------~~~~D~v~ 102 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTF-------DRQYDFIL 102 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCC-------CCCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCC-------CCCceEEE
Confidence 678999999999999998888755 999999999999999998765442 138899999865432 57899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
+..++|+ .+.++...+++++.++|+|||.+++..
T Consensus 103 ~~~~l~~--~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 103 STVVLMF--LEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EESCGGG--SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Ecchhhh--CCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9999987 445568899999999999999987753
No 77
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.65 E-value=1e-15 Score=126.85 Aligned_cols=119 Identities=14% Similarity=0.048 Sum_probs=87.3
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh
Q 025754 19 FAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ 98 (248)
Q Consensus 19 ~~~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (248)
|+...+-..-..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|+++..... ....+...+.....
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~---- 105 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPK---- 105 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCG----
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcc--ceeeeeeccccccc----
Confidence 444333333355889999999999999999988765 99999999999999998875431 12222222210000
Q ss_pred hcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..+++||+|++..++|+ ...++...++.++.++| |||.++++++.+
T Consensus 106 --~~~~~fD~Vv~~~~l~~--~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 106 --ELAGHFDFVLNDRLINR--FTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp --GGTTCCSEEEEESCGGG--SCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred --ccCCCccEEEEhhhhHh--CCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 02578999999999987 45677889999999999 999999996654
No 78
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.65 E-value=1.2e-15 Score=126.46 Aligned_cols=112 Identities=16% Similarity=0.177 Sum_probs=90.4
Q ss_pred HHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccC
Q 025754 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
++..+++++.+|||+|||+|..+..++..+. +++|+|+|+.|++.|+++.. . .++++|+.+.++ .+
T Consensus 47 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~--~-----~~~~~d~~~~~~------~~ 112 (260)
T 2avn_A 47 FLEEYLKNPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV--K-----NVVEAKAEDLPF------PS 112 (260)
T ss_dssp HHHHHCCSCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC--S-----CEEECCTTSCCS------CT
T ss_pred HHHHhcCCCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC--C-----CEEECcHHHCCC------CC
Confidence 3445556889999999999999998877755 89999999999999988754 1 278899877654 46
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
++||+|++...+++.... ...+++++.++|+|||.+++.+++....
T Consensus 113 ~~fD~v~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 158 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVEN---KDKAFSEIRRVLVPDGLLIATVDNFYTF 158 (260)
T ss_dssp TCEEEEEECSSHHHHCSC---HHHHHHHHHHHEEEEEEEEEEEEBHHHH
T ss_pred CCEEEEEEcchhhhcccc---HHHHHHHHHHHcCCCeEEEEEeCChHHH
Confidence 789999998765543332 7889999999999999999999887543
No 79
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.64 E-value=6.5e-15 Score=115.72 Aligned_cols=118 Identities=15% Similarity=0.143 Sum_probs=94.9
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCc-eEEEEEcCCCCCchhhhhc
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 100 (248)
.+++.. ..++.+|||+|||+|..+..++.. ..+++|+|+++.+++.|+++....+... ++.++++|+.+..
T Consensus 43 ~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------ 115 (194)
T 1dus_A 43 ILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV------ 115 (194)
T ss_dssp HHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC------
T ss_pred HHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc------
Confidence 344444 347889999999999999888877 5599999999999999999887654322 3889999986632
Q ss_pred ccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhH
Q 025754 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 151 (248)
.+++||+|++...+|+ ..+....+++++.++|+|||.+++..++...
T Consensus 116 -~~~~~D~v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 116 -KDRKYNKIITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp -TTSCEEEEEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred -ccCCceEEEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 2568999999887664 4667889999999999999999999887643
No 80
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.64 E-value=1.3e-15 Score=117.98 Aligned_cols=100 Identities=14% Similarity=0.218 Sum_probs=83.2
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++.... +++|+|+++.+++.++++.. ++.+.++| .++ .+++||+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~------~v~~~~~d---~~~------~~~~~D~ 78 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKFD------SVITLSDP---KEI------PDNSVDF 78 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCT------TSEEESSG---GGS------CTTCEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCC------CcEEEeCC---CCC------CCCceEE
Confidence 45788999999999999998887765 99999999999999988721 37888888 233 4678999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|++..++++. ++...+++++.++|+|||.+++..+.
T Consensus 79 v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 79 ILFANSFHDM----DDKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp EEEESCSTTC----SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEccchhcc----cCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 9999999873 24678999999999999999987443
No 81
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=3.8e-16 Score=129.53 Aligned_cols=101 Identities=12% Similarity=0.060 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||||||+|..+..++..+ .+|+|+|+|+.|++.|+.+. ++.++++|+.+.++ .+++||+|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~------~~~~fD~v 98 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLAL------PDKSVDGV 98 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCS------CTTCBSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCC------CCCCEeEE
Confidence 578999999999999999887744 59999999999998776543 38999999977665 46899999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|..++|+. ++...+++++.++|| ||.+++..++.
T Consensus 99 ~~~~~l~~~----~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 99 ISILAIHHF----SHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp EEESCGGGC----SSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred EEcchHhhc----cCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 999999874 447789999999999 99888876654
No 82
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=7.9e-16 Score=126.16 Aligned_cols=113 Identities=18% Similarity=0.169 Sum_probs=90.8
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++.... +|+|+|+|+.|++.|+++.... ++.++++|+.+.+...... ....||+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~----~~~~~~~d~~~~~~~~~~~-~~~~~d~ 127 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTAA----NISYRLLDGLVPEQAAQIH-SEIGDAN 127 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCCT----TEEEEECCTTCHHHHHHHH-HHHCSCE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCccc----CceEEECcccccccccccc-cccCccE
Confidence 45788999999999999999988776 8999999999999999887432 4899999997754422111 1134999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|++..++|+ .+.++...+++++.++|+|||.+++..+..
T Consensus 128 v~~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 128 IYMRTGFHH--IPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp EEEESSSTT--SCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred EEEcchhhc--CCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999999998 455678899999999999999988775544
No 83
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.63 E-value=2.7e-15 Score=119.75 Aligned_cols=107 Identities=14% Similarity=0.055 Sum_probs=88.3
Q ss_pred HHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
.....++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+... +.+.++|+.+ . .+++
T Consensus 55 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~--~------~~~~ 125 (205)
T 3grz_A 55 ERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLA--D------VDGK 125 (205)
T ss_dssp HHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTT--T------CCSC
T ss_pred HHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccc--c------CCCC
Confidence 33456889999999999999988887766799999999999999999887655322 8899999855 2 2578
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
||+|++...+++ ...+++++.++|+|||.+++..+.
T Consensus 126 fD~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 126 FDLIVANILAEI-------LLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EEEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred ceEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEEEecC
Confidence 999999876664 578999999999999999987443
No 84
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.63 E-value=5.4e-15 Score=120.00 Aligned_cols=119 Identities=15% Similarity=0.084 Sum_probs=91.2
Q ss_pred HHHhcCCCCeEEEEcCC-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccC
Q 025754 25 IKIYSHPYVTVCDLYCG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 25 i~~~~~~~~~VLDlGcG-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
+....+++.+|||+||| +|..+..++.....+|+|+|+|+.+++.|+++....+. ++.++++|+..... + .+
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~---~--~~ 121 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKG---V--VE 121 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTT---T--CC
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhh---c--cc
Confidence 55567789999999999 99999888776345999999999999999998876653 68999999743221 1 35
Q ss_pred CceeEEEeccchhhhc---------------CCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 104 NQADLVCCFQHLQMCF---------------ETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~---------------~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
++||+|++....+..- ...+....+++++.++|+|||.+++.++...
T Consensus 122 ~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 183 (230)
T 3evz_A 122 GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE 183 (230)
T ss_dssp SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH
T ss_pred CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH
Confidence 7899999875443210 0122347899999999999999999887664
No 85
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.63 E-value=8.3e-15 Score=117.25 Aligned_cols=117 Identities=12% Similarity=0.025 Sum_probs=90.4
Q ss_pred HHHHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhh
Q 025754 21 KTALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (248)
Q Consensus 21 ~~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (248)
...++... ..++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.|+++....+...++.++++|+.+...
T Consensus 44 ~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~---- 118 (204)
T 3njr_A 44 RALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA---- 118 (204)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT----
T ss_pred HHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc----
Confidence 33444444 457889999999999999888887 559999999999999999988765543358999999865211
Q ss_pred cccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHH
Q 025754 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~ 153 (248)
...+||+|++..++ ... +++++.++|+|||.+++..++.+.+.
T Consensus 119 --~~~~~D~v~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~ 161 (204)
T 3njr_A 119 --DLPLPEAVFIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVTLESET 161 (204)
T ss_dssp --TSCCCSEEEECSCC--------CHH-HHHHHHHHSCTTCEEEEEECSHHHHH
T ss_pred --cCCCCCEEEECCcc--------cHH-HHHHHHHhcCCCcEEEEEecCcccHH
Confidence 23579999876633 144 89999999999999999988765443
No 86
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.63 E-value=2.4e-14 Score=122.64 Aligned_cols=108 Identities=18% Similarity=0.105 Sum_probs=90.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++.. +..+++++|++ .+++.|+++....+...++.+.++|+.+.++ +..||+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY-------GNDYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC-------CSCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC-------CCCCcE
Confidence 56789999999999999888776 33599999999 9999999987765544459999999976544 345999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|++..++|+ .+.++...+++++.++|+|||.+++..+
T Consensus 236 v~~~~~l~~--~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 236 VLLPNFLHH--FDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEcchhcc--CCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 999999998 4677789999999999999999888744
No 87
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=5.2e-15 Score=115.07 Aligned_cols=117 Identities=12% Similarity=0.113 Sum_probs=89.6
Q ss_pred HHHHHHHh-cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh
Q 025754 21 KTALIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ 98 (248)
Q Consensus 21 ~~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (248)
+..++... ..++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++....+...++ ++++|+.+ .+
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-~~--- 88 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-AF--- 88 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-GG---
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-hh---
Confidence 34444444 457889999999999999888776 3458999999999999999988766544357 88888744 22
Q ss_pred hcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhH
Q 025754 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (248)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 151 (248)
+...++||+|++...+++ ..+++++.++|+|||.+++..+..+.
T Consensus 89 -~~~~~~~D~i~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 89 -DDVPDNPDVIFIGGGLTA--------PGVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp -GGCCSCCSEEEECC-TTC--------TTHHHHHHHTCCTTCEEEEEECSHHH
T ss_pred -hccCCCCCEEEECCcccH--------HHHHHHHHHhcCCCCEEEEEeecccc
Confidence 112378999999887765 56899999999999999998776543
No 88
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.62 E-value=5.6e-16 Score=121.27 Aligned_cols=106 Identities=10% Similarity=0.084 Sum_probs=83.9
Q ss_pred HhcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 27 IYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 27 ~~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
.++++..+|||||||+|.++..++.. +..+|+|+|+|+.|++.++++....+...++.+ +|.... . .+++
T Consensus 45 ~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~------~~~~ 115 (200)
T 3fzg_A 45 GNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-V------YKGT 115 (200)
T ss_dssp HHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-H------TTSE
T ss_pred hhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-C------CCCC
Confidence 34577889999999999999888766 334999999999999999999887664444555 565221 1 4788
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
||+|.+...+|++ ++.+..+..+.+.|+|||+||-.
T Consensus 116 ~DvVLa~k~LHlL----~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 116 YDVVFLLKMLPVL----KQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp EEEEEEETCHHHH----HHTTCCHHHHHHTCEEEEEEEEE
T ss_pred cChhhHhhHHHhh----hhhHHHHHHHHHHhCCCCEEEEe
Confidence 9999999999982 55666777999999999988754
No 89
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=1.4e-14 Score=115.50 Aligned_cols=117 Identities=11% Similarity=0.010 Sum_probs=92.0
Q ss_pred HHHHHHHHh-cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh
Q 025754 20 AKTALIKIY-SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (248)
Q Consensus 20 ~~~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (248)
++..++... ..++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++....+. .++.++++|+.+...
T Consensus 28 i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~-- 104 (204)
T 3e05_A 28 VRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLD-- 104 (204)
T ss_dssp HHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCT--
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhh--
Confidence 334444444 4578999999999999998888774 46999999999999999998766543 358999999855322
Q ss_pred hhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
...+||+|++...++ ....+++++.++|+|||.+++..+...
T Consensus 105 ----~~~~~D~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 146 (204)
T 3e05_A 105 ----DLPDPDRVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVTLD 146 (204)
T ss_dssp ----TSCCCSEEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECBHH
T ss_pred ----cCCCCCEEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecccc
Confidence 236799999887655 367899999999999999999877653
No 90
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.62 E-value=2.6e-14 Score=123.42 Aligned_cols=107 Identities=25% Similarity=0.220 Sum_probs=90.1
Q ss_pred CCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 32 YVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
+.+|||||||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.++.+|+.+.+.. .++.||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF-----EGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG-----TTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc-----CCCCccEEE
Confidence 789999999999999988876 3458999999 889999999887655445699999999775410 145699999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
+..++|+ .+.+....+++++++.|+|||.+++..
T Consensus 254 ~~~vlh~--~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 254 LNDCLHY--FDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EESCGGG--SCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Eeccccc--CCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999998 567778999999999999999998873
No 91
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.61 E-value=5.6e-15 Score=122.44 Aligned_cols=125 Identities=19% Similarity=0.159 Sum_probs=94.0
Q ss_pred HHHHHHHhcC---CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh
Q 025754 21 KTALIKIYSH---PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (248)
Q Consensus 21 ~~~li~~~~~---~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (248)
-+.++..++. ++.+|||+|||+|..+..++.....+++|+|+++.+++.|++.....+...++.++++|+.+...
T Consensus 36 d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~-- 113 (259)
T 3lpm_A 36 DAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD-- 113 (259)
T ss_dssp HHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG--
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh--
Confidence 3556666654 68899999999999999888776569999999999999999998876655569999999865321
Q ss_pred hhcccCCceeEEEeccchhhh----------------cCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 98 QMQEKANQADLVCCFQHLQMC----------------FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~----------------~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
.+ ..++||+|++....+.. .........+++.+.++|+|||.+++..+..
T Consensus 114 ~~--~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 179 (259)
T 3lpm_A 114 LI--PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE 179 (259)
T ss_dssp TS--CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred hh--ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH
Confidence 11 35789999996433211 0112456789999999999999999986543
No 92
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=1.8e-15 Score=124.77 Aligned_cols=109 Identities=23% Similarity=0.266 Sum_probs=89.1
Q ss_pred HHHHh-cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 24 li~~~-~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
++... ..++.+|||+|||+|..+..++.. +..+++|+|+|+.|++.++++.. ++.+.++|+.+.+
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~------~~~~~~~d~~~~~------- 91 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLP------NTNFGKADLATWK------- 91 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHST------TSEEEECCTTTCC-------
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCC------CcEEEECChhhcC-------
Confidence 44444 347789999999999999888776 34589999999999999988722 3789999986643
Q ss_pred cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
.+++||+|++..++|++ ++...+++++.++|+|||.+++.+++.
T Consensus 92 ~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 92 PAQKADLLYANAVFQWV----PDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp CSSCEEEEEEESCGGGS----TTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred ccCCcCEEEEeCchhhC----CCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 25789999999999983 347789999999999999999998764
No 93
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.60 E-value=1.6e-14 Score=121.03 Aligned_cols=105 Identities=10% Similarity=-0.035 Sum_probs=83.9
Q ss_pred cCCCCeEEEEcCCCCccHhHH-HHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKW-ETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l-~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
++++.+|||||||+|..+..+ +....++|+|+|+|+.|++.|+++.+..+. .++.++++|+.+ + ++++||
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~--l------~d~~FD 190 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETV--I------DGLEFD 190 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGG--G------GGCCCS
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhh--C------CCCCcC
Confidence 568999999999999876444 443445999999999999999998876654 569999999854 2 257899
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|++... .++...+++++.++|||||.+++...+.
T Consensus 191 vV~~~a~-------~~d~~~~l~el~r~LkPGG~Lvv~~~~~ 225 (298)
T 3fpf_A 191 VLMVAAL-------AEPKRRVFRNIHRYVDTETRIIYRTYTG 225 (298)
T ss_dssp EEEECTT-------CSCHHHHHHHHHHHCCTTCEEEEEECCG
T ss_pred EEEECCC-------ccCHHHHHHHHHHHcCCCcEEEEEcCcc
Confidence 9987553 1346789999999999999999886543
No 94
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.60 E-value=6.9e-15 Score=126.72 Aligned_cols=107 Identities=15% Similarity=0.091 Sum_probs=87.3
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||||||+|..+..++..+..+|+|+|+|+ |++.|+++....+...++.++++|+.+.++ ++++||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL------PVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC------SCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC------CCCcEEE
Confidence 457889999999999998888887766999999997 999999988776544569999999977654 3578999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEE
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i 143 (248)
|++....+ .+........++.++.++|+|||.++
T Consensus 135 Ivs~~~~~-~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMGY-FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCBT-TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCchh-hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 99876322 23345567889999999999999997
No 95
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.60 E-value=2.5e-14 Score=123.98 Aligned_cols=113 Identities=13% Similarity=0.091 Sum_probs=92.0
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
.++..+ ..++.+|||||||+|..+..++... ..+++++|+ +.+++.|+++....+...++.++++|+.+.++
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 254 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY----- 254 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-----
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-----
Confidence 444444 3477899999999999999888763 348999999 99999999988765544459999999977544
Q ss_pred ccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
+ .+|+|++..++|+ .+.+....+++++.++|+|||.+++..
T Consensus 255 --~-~~D~v~~~~vlh~--~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 255 --P-EADAVLFCRILYS--ANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp --C-CCSEEEEESCGGG--SCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred --C-CCCEEEEechhcc--CCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 2399999999997 466778999999999999999998773
No 96
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.60 E-value=2.4e-15 Score=130.01 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=88.5
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++..+..+|+|+|+|+ |++.|+++....+...++.++++|+.+.++ +.++||+|
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~I 137 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL------PVEKVDII 137 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC------SSSCEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccC------CCCceEEE
Confidence 47899999999999999999888777999999994 999999988876655569999999987655 46899999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLG 144 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 144 (248)
++....+. +........++..+.++|||||+++.
T Consensus 138 is~~~~~~-l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 138 ISEWMGYC-LFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EECCCBBT-BTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEcccccc-ccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 98664333 23345678899999999999999863
No 97
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.60 E-value=5.6e-15 Score=115.10 Aligned_cols=111 Identities=12% Similarity=0.039 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+. ++...++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA-----IDCLTGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH-----HHHBCSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh-----HHhhcCCCCEE
Confidence 4678999999999999988888766699999999999999999887655434589999987431 11134679999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHh--ccccCCcEEEEEecChh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVS--SLLKPGGYFLGITPDSS 150 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~--~~LkpgG~~i~~~~~~~ 150 (248)
++....+. .....+++.+. ++|+|||.+++.++...
T Consensus 105 ~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 105 FLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp EECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 98765432 23455666665 99999999999876653
No 98
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.59 E-value=2e-14 Score=133.88 Aligned_cols=112 Identities=20% Similarity=0.326 Sum_probs=93.7
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCC--CeEEEEeCChHHHHHHHHHHHhcC-----CCceEEEEEcCCCCCchhhhhccc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALI--ANYIGIDVATSGIGEARDTWENQR-----KNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~--~~v~giDis~~~l~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
.++.+|||||||+|..+..++.... .+|+|+|+|+.|++.|+++..... ...++.++++|+.+.++ .
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~------~ 793 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS------R 793 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT------T
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc------c
Confidence 3788999999999999988877652 599999999999999998765321 12369999999988665 4
Q ss_pred CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+++||+|+|..++|+ ...+....+++++.++|+|| .+++++|+.+
T Consensus 794 d~sFDlVV~~eVLeH--L~dp~l~~~L~eI~RvLKPG-~LIISTPN~e 838 (950)
T 3htx_A 794 LHDVDIGTCLEVIEH--MEEDQACEFGEKVLSLFHPK-LLIVSTPNYE 838 (950)
T ss_dssp SCSCCEEEEESCGGG--SCHHHHHHHHHHHHHTTCCS-EEEEEECBGG
T ss_pred cCCeeEEEEeCchhh--CChHHHHHHHHHHHHHcCCC-EEEEEecCch
Confidence 688999999999998 45667778999999999999 8888899874
No 99
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.59 E-value=1.6e-14 Score=113.10 Aligned_cols=114 Identities=17% Similarity=0.063 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|++.....+...++.++++|+.+. ...++...++||+|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~fD~i 120 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA--LEQFYEEKLQFDLV 120 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH--HHHHHHTTCCEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH--HHHHHhcCCCCCEE
Confidence 3688999999999999988877666699999999999999999887655334589999997441 11111125789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHH--hccccCCcEEEEEecChh
Q 025754 110 CCFQHLQMCFETEERARRLLQNV--SSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~--~~~LkpgG~~i~~~~~~~ 150 (248)
++....+. ... ...++.+ .++|+|||.+++.++...
T Consensus 121 ~~~~~~~~--~~~---~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 121 LLDPPYAK--QEI---VSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp EECCCGGG--CCH---HHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EECCCCCc--hhH---HHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 99876442 222 3444445 889999999999877653
No 100
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.59 E-value=2.1e-14 Score=112.58 Aligned_cols=110 Identities=16% Similarity=0.135 Sum_probs=88.2
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++... .+++|+|+|+.+++.|+++....+...++.+.++|+.+ .+ + ..++||+
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~----~-~~~~~D~ 103 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-AL----C-KIPDIDI 103 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HH----T-TSCCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hc----c-cCCCCCE
Confidence 4578899999999999988887766 69999999999999999988765433358899998743 12 1 1258999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
|++...+++ ...+++++.++|+|||.+++..++....
T Consensus 104 v~~~~~~~~-------~~~~l~~~~~~l~~gG~l~~~~~~~~~~ 140 (192)
T 1l3i_A 104 AVVGGSGGE-------LQEILRIIKDKLKPGGRIIVTAILLETK 140 (192)
T ss_dssp EEESCCTTC-------HHHHHHHHHHTEEEEEEEEEEECBHHHH
T ss_pred EEECCchHH-------HHHHHHHHHHhcCCCcEEEEEecCcchH
Confidence 999876654 5789999999999999999998776443
No 101
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.59 E-value=1.3e-14 Score=116.05 Aligned_cols=108 Identities=11% Similarity=0.051 Sum_probs=86.7
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
.++... ..++.+|||+|||+|..+..++... .+++|+|+|+.+++.|+++....+.. ++.+.++|+.+...
T Consensus 68 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------ 139 (210)
T 3lbf_A 68 RMTELLELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQ------ 139 (210)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG------
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCc------
Confidence 334433 4578999999999999998888774 59999999999999999988765432 48999999866433
Q ss_pred cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
..++||+|++..+++++.. ++.++|+|||.+++.+++
T Consensus 140 ~~~~~D~i~~~~~~~~~~~----------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 ARAPFDAIIVTAAPPEIPT----------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGCCEEEEEESSBCSSCCT----------HHHHTEEEEEEEEEEECS
T ss_pred cCCCccEEEEccchhhhhH----------HHHHhcccCcEEEEEEcC
Confidence 3578999999998887332 578899999999999776
No 102
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.59 E-value=2.1e-14 Score=115.48 Aligned_cols=117 Identities=15% Similarity=0.062 Sum_probs=87.8
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||||||+|..+..++... ..+++|+|+|+.+++.|+++....+. .++.++++|+.+.. ..+ .+++||
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~--~~~--~~~~~D 113 (214)
T 1yzh_A 39 GNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLT--DYF--EDGEID 113 (214)
T ss_dssp TSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGG--GTS--CTTCCS
T ss_pred CCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHH--hhc--CCCCCC
Confidence 3467899999999999998887763 45999999999999999998866543 35899999997633 111 357899
Q ss_pred EEEeccchhhhcC----CHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 108 LVCCFQHLQMCFE----TEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 108 ~V~~~~~l~~~~~----~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+|++.+...+.-. .......+++++.++|+|||.+++.+.+..
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG 160 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 9998865432000 000135799999999999999999876653
No 103
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.59 E-value=9.2e-14 Score=120.85 Aligned_cols=107 Identities=19% Similarity=0.123 Sum_probs=88.9
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++... ..+++++|+ +.+++.|+++....+...++.++++|+.+ ++ +..||+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------~~~~D~ 251 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PL-------PVTADV 251 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC-------SCCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cC-------CCCCCE
Confidence 467899999999999998887763 348999999 99999999988765544469999999865 22 234999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|++..++|+ .+.+....+++++.++|+|||.+++..+
T Consensus 252 v~~~~vl~~--~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLN--WSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccC--CCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999997 4566677999999999999999988755
No 104
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.58 E-value=5.2e-15 Score=129.19 Aligned_cols=107 Identities=16% Similarity=0.102 Sum_probs=89.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||||||+|..+..++..+..+|+|+|+| .|++.|+++....+...++.++++|+.+..+ +++||+|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~D~I 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL-------PEKVDVI 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC-------SSCEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc-------CCcceEE
Confidence 4789999999999999998888877799999999 9999999988877655569999999966554 3789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++....+. .........++..+.++|+|||++++.
T Consensus 134 v~~~~~~~-l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 134 ISEWMGYF-LLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EECCCBTT-BTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEcChhhc-ccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 99664443 444556888999999999999999764
No 105
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.58 E-value=3e-15 Score=119.52 Aligned_cols=111 Identities=12% Similarity=0.029 Sum_probs=84.4
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCC-ceEEEEEcCCCCCchhhhhcccCCc-eeE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQ-ADL 108 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~-fD~ 108 (248)
++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++....+.. .++.++++|+.+... .. .+++ ||+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~--~~--~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK--QP--QNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT--SC--CSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH--hh--ccCCCCCE
Confidence 67899999999999988877776679999999999999999988765432 358999999743111 00 2467 999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHH--hccccCCcEEEEEecChh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNV--SSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~--~~~LkpgG~~i~~~~~~~ 150 (248)
|++...++ ......+++.+ .++|+|||.+++......
T Consensus 129 I~~~~~~~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 129 VFLDPPFH-----FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp EEECCCSS-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred EEECCCCC-----CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 99877643 22456677777 678999999999866543
No 106
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.58 E-value=1.1e-14 Score=121.56 Aligned_cols=108 Identities=16% Similarity=0.143 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCCCc----cHhHHHHc-C----CCeEEEEeCChHHHHHHHHHHHh-----------------------cC
Q 025754 31 PYVTVCDLYCGAGV----DVDKWETA-L----IANYIGIDVATSGIGEARDTWEN-----------------------QR 78 (248)
Q Consensus 31 ~~~~VLDlGcG~G~----~~~~l~~~-~----~~~v~giDis~~~l~~a~~~~~~-----------------------~~ 78 (248)
++.+|||+|||||. .+..++.. + ..+|+|+|+|+.||+.|++..-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 33344433 2 13899999999999999875310 00
Q ss_pred -C------CceEEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 79 -K------NFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 79 -~------~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
. ...+.|.++|+.+.++. ..++||+|+|..+++| .+.+...++++++++.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~-----~~~~fDlI~crnvliy--f~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN-----VPGPFDAIFCRNVMIY--FDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC-----CCCCEEEEEECSSGGG--SCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCC-----cCCCeeEEEECCchHh--CCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0 01489999999775441 1468999999999998 35777899999999999999999874
No 107
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.58 E-value=1.2e-14 Score=116.79 Aligned_cols=107 Identities=11% Similarity=-0.009 Sum_probs=78.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
++++.+|||+|||+|..+..++.. +.++|+|+|+|+.|++.+.+...... ++.++++|+........ ..++||
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~---~v~~~~~d~~~~~~~~~---~~~~fD 128 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN---NIIPLLFDASKPWKYSG---IVEKVD 128 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS---SEEEECSCTTCGGGTTT---TCCCEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC---CeEEEEcCCCCchhhcc---ccccee
Confidence 457889999999999988888765 33589999999998876665544332 37888888866311000 147899
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
+|++... .......+++++.++|||||.|++.++
T Consensus 129 ~V~~~~~------~~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 129 LIYQDIA------QKNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp EEEECCC------STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEecc------ChhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 9998742 123455678999999999999999853
No 108
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.57 E-value=5.8e-15 Score=119.41 Aligned_cols=117 Identities=15% Similarity=0.157 Sum_probs=86.8
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||||||+|..+..++... ...|+|+|+|+.+++.|+++....+. .++.++++|+.+. +...+ ++++||
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l-~nv~~~~~Da~~~-l~~~~--~~~~~d 107 (218)
T 3dxy_A 32 GREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL-SNLRVMCHDAVEV-LHKMI--PDNSLR 107 (218)
T ss_dssp SSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC-SSEEEECSCHHHH-HHHHS--CTTCEE
T ss_pred CCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC-CcEEEEECCHHHH-HHHHc--CCCChh
Confidence 3467899999999999999988764 35899999999999999998766542 2489999997441 00001 468999
Q ss_pred EEEeccchhhhcCCHHHH------HHHHHHHhccccCCcEEEEEecChhH
Q 025754 108 LVCCFQHLQMCFETEERA------RRLLQNVSSLLKPGGYFLGITPDSST 151 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~------~~~l~~~~~~LkpgG~~i~~~~~~~~ 151 (248)
.|++.+...+ ...... ..+++++.++|||||.+++.+.+...
T Consensus 108 ~v~~~~~~p~--~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~ 155 (218)
T 3dxy_A 108 MVQLFFPDPW--HKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPY 155 (218)
T ss_dssp EEEEESCCCC--CSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHH
T ss_pred eEEEeCCCCc--cchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHH
Confidence 9998764432 111111 25999999999999999998876643
No 109
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.57 E-value=4e-14 Score=118.36 Aligned_cols=112 Identities=13% Similarity=0.141 Sum_probs=86.2
Q ss_pred CCCeEEEEcCCC---CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchh-------hhh
Q 025754 31 PYVTVCDLYCGA---GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE-------TQM 99 (248)
Q Consensus 31 ~~~~VLDlGcG~---G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~ 99 (248)
+..+|||||||+ |..+..+... +..+|+|+|+|+.|++.|+++.... .++.++++|+.+.... ..+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhccC
Confidence 447999999999 9776555443 3459999999999999999987542 2489999999764311 111
Q ss_pred cccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
...+||+|++..++|++ +.+....+++++.++|+|||+|+++....
T Consensus 154 --d~~~~d~v~~~~vlh~~--~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 --DFSRPAAIMLVGMLHYL--SPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp --CTTSCCEEEETTTGGGS--CTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred --CCCCCEEEEEechhhhC--CcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 12489999999999983 33367889999999999999999985543
No 110
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.57 E-value=1.3e-14 Score=125.41 Aligned_cols=106 Identities=16% Similarity=0.087 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||||||+|..+..++..+..+|+|+|+|+ +++.|+++....+...++.++++|+.+.++ +++||+|
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-------~~~~D~I 120 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-------PEQVDII 120 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC-------CCceeEE
Confidence 47889999999999999888887767999999996 889998888766544569999999977543 4689999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++....++. ..+.....+.++.++|+|||.+++.
T Consensus 121 vs~~~~~~~--~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 121 ISEPMGYML--FNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EECCCBTTB--TTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchhcC--ChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 998765542 2334566777899999999999865
No 111
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.57 E-value=1.4e-14 Score=124.26 Aligned_cols=106 Identities=17% Similarity=0.111 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++..+..+|+|+|+| .|++.|+++....+...++.++++|+.+.++ +.++||+|
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~D~I 109 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL------PFPKVDII 109 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC------SSSCEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC------CCCcccEE
Confidence 4788999999999999888887776799999999 5999999988776655569999999977654 35789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i 143 (248)
++....+. +.....+..++.++.++|+|||.++
T Consensus 110 vs~~~~~~-l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 110 ISEWMGYF-LLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EECCCBTT-BSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEeCchhh-cccHHHHHHHHHHHHhhcCCCeEEE
Confidence 98754332 2344557789999999999999997
No 112
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.57 E-value=2.1e-13 Score=118.00 Aligned_cols=108 Identities=19% Similarity=0.153 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++... ..+++++|+ +.+++.|+++....+...++.++++|+.+ .+ +..||+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------~~~~D~ 252 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PL-------PRKADA 252 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CC-------SSCEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CC-------CCCccE
Confidence 467899999999999998887763 348999999 99999999988765544469999999865 22 234999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|++..++|+ .+.+....+++++.++|+|||.+++..+.
T Consensus 253 v~~~~vl~~--~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLN--WPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccC--CCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999999997 45667789999999999999999987544
No 113
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.56 E-value=2.5e-14 Score=116.29 Aligned_cols=106 Identities=14% Similarity=0.086 Sum_probs=84.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
++||.+|||+|||+|.++..++.. +.++|+|+|+++.|++.++++....+ ++..+..|+...... .....++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~---ni~~V~~d~~~p~~~---~~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR---NIFPILGDARFPEKY---RHLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT---TEEEEESCTTCGGGG---TTTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc---CeeEEEEeccCcccc---ccccceE
Confidence 469999999999999999999875 45699999999999999988776543 388889988764332 1246789
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|+|++....+ ++...++.++.+.|||||.+++.+
T Consensus 149 DvVf~d~~~~------~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 149 DGLYADVAQP------EQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEECCCCT------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEeccCC------hhHHHHHHHHHHhccCCCEEEEEE
Confidence 9998765433 346789999999999999999874
No 114
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.56 E-value=6.7e-14 Score=122.19 Aligned_cols=117 Identities=14% Similarity=0.093 Sum_probs=94.1
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|+++....+. ++.++++|+.+... ..++||+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~------~~~~fD~Ii 303 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALT------EEARFDIIV 303 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSC------TTCCEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccc------cCCCeEEEE
Confidence 678999999999999999988765 999999999999999998876553 38899999976543 247899999
Q ss_pred eccchhhhc-CCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHH
Q 025754 111 CFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (248)
Q Consensus 111 ~~~~l~~~~-~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 156 (248)
|...+|+.. ...+....+++++.++|+|||.+++...........+
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l 350 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLL 350 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHH
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHH
Confidence 988777521 1246688999999999999999999876654333333
No 115
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.56 E-value=2.1e-14 Score=115.68 Aligned_cols=117 Identities=14% Similarity=0.089 Sum_probs=86.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||||||+|..+..++.. +..+++|+|+|+.+++.|+++....+. .++.++++|+.+ +...+ .+++||
T Consensus 36 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~--l~~~~--~~~~~d 110 (213)
T 2fca_A 36 GNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADT--LTDVF--EPGEVK 110 (213)
T ss_dssp TSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGG--HHHHC--CTTSCC
T ss_pred CCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHH--HHhhc--CcCCcC
Confidence 346789999999999999998876 345999999999999999998776542 248999999865 21111 357899
Q ss_pred EEEeccchhhhcC----CHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 108 LVCCFQHLQMCFE----TEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 108 ~V~~~~~l~~~~~----~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
.|++.+...+.-. ..-....+++++.++|+|||.+++.+.+..
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~ 157 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG 157 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 9987654332100 000136789999999999999999887653
No 116
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.56 E-value=1.5e-14 Score=111.63 Aligned_cols=111 Identities=9% Similarity=0.061 Sum_probs=82.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.+++.+|||+|||+|..+..++..+. .++|+|+|+.+++.|+++....+. ++.++++|+.+. ........++||+
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~--~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVF--LPEAKAQGERFTV 113 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHH--HHHHHHTTCCEEE
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHH--HHhhhccCCceEE
Confidence 34788999999999999998888766 599999999999999998876543 588999987441 1111112348999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHh--ccccCCcEEEEEecChh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVS--SLLKPGGYFLGITPDSS 150 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~--~~LkpgG~~i~~~~~~~ 150 (248)
|++...++. . ...+++.+. ++|+|||.+++.++...
T Consensus 114 i~~~~~~~~--~----~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 114 AFMAPPYAM--D----LAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp EEECCCTTS--C----TTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred EEECCCCch--h----HHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 999865541 2 223444444 99999999999877654
No 117
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.55 E-value=3.5e-14 Score=123.35 Aligned_cols=107 Identities=14% Similarity=0.036 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCc--hhhhhcccCCce
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN--FETQMQEKANQA 106 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~f 106 (248)
.+..+|||||||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.++.+|+.+.+ + +++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-------p~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF-------PTGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC-------CCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC-------CCCc
Confidence 36689999999999999988775 3448999999 9999999998876554456999999997753 3 3689
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|+|++..++|+ .+.++...++++++++|+|||.+++..
T Consensus 250 D~v~~~~vlh~--~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 250 DAVWMSQFLDC--FSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SEEEEESCSTT--SCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEEechhhh--CCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999999997 567788899999999999999998863
No 118
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.55 E-value=3e-14 Score=119.40 Aligned_cols=111 Identities=14% Similarity=0.032 Sum_probs=89.1
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
..+...+.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++....++...++.++++|+.+...
T Consensus 117 ~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~------- 189 (278)
T 2frn_A 117 VRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------- 189 (278)
T ss_dssp HHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------
T ss_pred HHHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-------
Confidence 3344557789999999999999999998876657999999999999999988766654458999999976443
Q ss_pred CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
.++||+|++.... ....++.++.++|+|||.+++....
T Consensus 190 ~~~fD~Vi~~~p~--------~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 190 ENIADRILMGYVV--------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CSCEEEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCccEEEECCch--------hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 5789999885431 1356788899999999999987544
No 119
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.55 E-value=4.2e-14 Score=115.63 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=82.9
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhc-----CCCceEEEEEcCCCCCchhhhhccc
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQ-----RKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
..++.+|||||||+|.++..++... ...++|+|+|+.|++.|+++.... ....++.++++|+... +...+ .
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-l~~~~--~ 120 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-LPNFF--Y 120 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-HHHHC--C
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-hhhhC--C
Confidence 4467789999999999999988763 458999999999999998776431 1123589999998651 11111 3
Q ss_pred CCceeEEEeccchhhhcC-CHHH---HHHHHHHHhccccCCcEEEEEecChh
Q 025754 103 ANQADLVCCFQHLQMCFE-TEER---ARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~-~~~~---~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+++||.|++.+.-.+.-. +... ...+++++.++|+|||.|++.+.+..
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~ 172 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLE 172 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHH
Confidence 678999987654332100 0000 14799999999999999999887754
No 120
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.54 E-value=4.5e-14 Score=117.28 Aligned_cols=102 Identities=21% Similarity=0.333 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++.. ++.+.++|+...++ .+++||+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~------~~~~fD~ 151 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP------QVTFCVASSHRLPF------SDTSMDA 151 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTSCSB------CTTCEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC------CcEEEEcchhhCCC------CCCceeE
Confidence 57889999999999999998876 24599999999999999987752 26789999876554 4678999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHH
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~ 154 (248)
|++.++.+ +++++.++|+|||.+++..++...+..
T Consensus 152 v~~~~~~~-----------~l~~~~~~L~pgG~l~~~~~~~~~~~~ 186 (269)
T 1p91_A 152 IIRIYAPC-----------KAEELARVVKPGGWVITATPGPRHLME 186 (269)
T ss_dssp EEEESCCC-----------CHHHHHHHEEEEEEEEEEEECTTTTHH
T ss_pred EEEeCChh-----------hHHHHHHhcCCCcEEEEEEcCHHHHHH
Confidence 99876422 478899999999999999988765443
No 121
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.54 E-value=2.4e-14 Score=114.32 Aligned_cols=108 Identities=8% Similarity=0.000 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++....+. .++.++++|+.+. ++...++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~-----~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSF-----LAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHH-----HSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHH-----HhhcCCCCCEEE
Confidence 6789999999999998887777666999999999999999998876543 3589999987431 111356899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhc--cccCCcEEEEEecCh
Q 025754 111 CFQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPDS 149 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~--~LkpgG~~i~~~~~~ 149 (248)
+...++. .....+++.+.+ +|+|||++++.+...
T Consensus 128 ~~~p~~~-----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 128 VDPPFRR-----GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp ECCSSST-----TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred ECCCCCC-----CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8765442 224456666654 699999999886654
No 122
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=1.6e-13 Score=106.79 Aligned_cols=107 Identities=8% Similarity=-0.018 Sum_probs=85.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++. +..+++|+|+|+.+++.|+++....+. .++.++++|+.+ .+ ++++||+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~-~~------~~~~~D~ 103 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED-VL------DKLEFNK 103 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-HG------GGCCCSE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-cc------cCCCCcE
Confidence 34788999999999999988877 556999999999999999998876543 348899999754 22 2468999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHH
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~ 154 (248)
|++... .....+++++.++ |||.+++..++...+..
T Consensus 104 i~~~~~--------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~ 139 (183)
T 2yxd_A 104 AFIGGT--------KNIEKIIEILDKK--KINHIVANTIVLENAAK 139 (183)
T ss_dssp EEECSC--------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHH
T ss_pred EEECCc--------ccHHHHHHHHhhC--CCCEEEEEecccccHHH
Confidence 999875 2356788888888 99999999888765443
No 123
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.54 E-value=5e-14 Score=114.34 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=82.8
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++... .+++|+|+|+.+++.|+++....+ ++.++++|+..... ..++||+
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~------~~~~fD~ 137 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYE------EEKPYDR 137 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCG------GGCCEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccc------cCCCccE
Confidence 4578899999999999998888776 599999999999999999876543 48899999855221 2568999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|++..+++++. .++.++|+|||.+++.+++.
T Consensus 138 v~~~~~~~~~~----------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 138 VVVWATAPTLL----------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEESSBBSSCC----------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH----------HHHHHHcCCCcEEEEEEcCC
Confidence 99999888732 35888999999999997754
No 124
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.53 E-value=4.3e-14 Score=116.89 Aligned_cols=105 Identities=21% Similarity=0.144 Sum_probs=84.7
Q ss_pred HHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
.....++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+.. +.+.++|+.+. + +.++
T Consensus 115 ~~~~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~------~~~~ 184 (254)
T 2nxc_A 115 ARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-L------PFGP 184 (254)
T ss_dssp HHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-G------GGCC
T ss_pred HHhcCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-C------cCCC
Confidence 34467889999999999999888877776 9999999999999999988766533 78888886331 1 2568
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
||+|++....+. ...++.++.++|+|||.++++..
T Consensus 185 fD~Vv~n~~~~~-------~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 185 FDLLVANLYAEL-------HAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp EEEEEEECCHHH-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEECCcHHH-------HHHHHHHHHHHcCCCCEEEEEee
Confidence 999998764443 67899999999999999998743
No 125
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.53 E-value=7e-14 Score=119.83 Aligned_cols=106 Identities=16% Similarity=0.034 Sum_probs=89.2
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
+..+|||+|||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.+..+|+.. ++ +.+||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------p~~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PL-------PAGAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC-------CCSCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CC-------CCCCcEE
Confidence 4679999999999999888775 3458999999 99999999988765544569999999863 33 2389999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
++..++|+ .+.+....++++++++|+|||.+++..+
T Consensus 240 ~~~~vlh~--~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 240 VLSAVLHD--WDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEESCGGG--SCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEehhhcc--CCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 99999998 5677789999999999999999998743
No 126
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.53 E-value=1.7e-13 Score=110.70 Aligned_cols=108 Identities=12% Similarity=0.059 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCCce
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~f 106 (248)
++.+|||||||+|..+..++.. ...+|+++|+++.+++.|++++...+...++.++++|+.+. .+.+.. ..++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--l~~~~~~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL--IPQLKKKYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH--GGGTTTTSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH--HHHHHHhcCCCce
Confidence 6789999999999999888774 24599999999999999999887766545699999997431 111100 12689
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|++....++ ......+++.+ ++|+|||++++.
T Consensus 136 D~V~~d~~~~~----~~~~~~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 136 DMVFLDHWKDR----YLPDTLLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp SEEEECSCGGG----HHHHHHHHHHT-TCCCTTCEEEES
T ss_pred EEEEEcCCccc----chHHHHHHHhc-cccCCCeEEEEe
Confidence 99998876654 23345677777 999999999987
No 127
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.53 E-value=9e-15 Score=118.67 Aligned_cols=111 Identities=14% Similarity=0.197 Sum_probs=84.7
Q ss_pred HHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC-Cchhhhhccc
Q 025754 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEK 102 (248)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~ 102 (248)
++....+++.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|+++.. ++.++++|+.+ .++ .
T Consensus 41 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~------~ 107 (226)
T 3m33_A 41 WLSRLLTPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANAP------HADVYEWNGKGELPA------G 107 (226)
T ss_dssp HHHHHCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHCT------TSEEEECCSCSSCCT------T
T ss_pred HHHhcCCCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhCC------CceEEEcchhhccCC------c
Confidence 3444567889999999999999999888754 99999999999999988722 38899999843 333 3
Q ss_pred -CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE--ecChhHHHHHHH
Q 025754 103 -ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI--TPDSSTIWAKYQ 157 (248)
Q Consensus 103 -~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~--~~~~~~~~~~~~ 157 (248)
+++||+|++.. +...+++++.++|||||.++.. ..+...+.+.+.
T Consensus 108 ~~~~fD~v~~~~----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~ 155 (226)
T 3m33_A 108 LGAPFGLIVSRR----------GPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLA 155 (226)
T ss_dssp CCCCEEEEEEES----------CCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHH
T ss_pred CCCCEEEEEeCC----------CHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHH
Confidence 67899998863 2456788999999999999833 223345555544
No 128
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.53 E-value=2.5e-13 Score=118.15 Aligned_cols=105 Identities=19% Similarity=0.141 Sum_probs=89.1
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.+..+|+. .++ +..||+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~-------p~~~D~ 271 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETI-------PDGADV 271 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCC-------CSSCSE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCC-------CCCceE
Confidence 46789999999999999988876 3348999999 9999999998876554456999999987 233 237999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|++..++|+ .+.+....+++++.+.|+|||.+++.
T Consensus 272 v~~~~vlh~--~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 272 YLIKHVLHD--WDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred EEhhhhhcc--CCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999998 56777889999999999999999987
No 129
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.53 E-value=5.1e-14 Score=114.77 Aligned_cols=104 Identities=10% Similarity=0.074 Sum_probs=83.1
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
++.+|||||||+|..+..++.. +..+|+|+|+++.+++.|++++...+...++.++++|+.+... .. .+++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~---~~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFE-NV---NDKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHH-HH---TTSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH-hh---ccCCccEE
Confidence 6789999999999999888774 3469999999999999999998776544469999999854311 01 25789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++..... ....+++.+.++|+|||++++.
T Consensus 147 ~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKA-------QSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSS-------SHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCcHH-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 8765322 2567899999999999999985
No 130
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.53 E-value=6.7e-14 Score=121.80 Aligned_cols=109 Identities=15% Similarity=0.047 Sum_probs=83.5
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHH-------hcCC-CceEEEEEcCCCCCchhhh
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWE-------NQRK-NFIAEFFEADPCAENFETQ 98 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~-------~~~~-~~~~~~~~~d~~~~~~~~~ 98 (248)
-+.++.+|||||||+|..+..++.. +..+++|+|+|+.+++.|++... ..+. ..++.|+++|+.+.++...
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc
Confidence 3568999999999999999888754 55569999999999999887432 2222 2469999999988665311
Q ss_pred hcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
-..+|+|++...++ .++....+.++.+.|||||.|+++
T Consensus 250 ----~~~aDVVf~Nn~~F-----~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 250 ----IANTSVIFVNNFAF-----GPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ----HHTCSEEEECCTTC-----CHHHHHHHHHHHTTSCTTCEEEES
T ss_pred ----cCCccEEEEccccc-----CchHHHHHHHHHHcCCCCcEEEEe
Confidence 13699999865432 245677788999999999999986
No 131
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.52 E-value=3.7e-14 Score=123.13 Aligned_cols=104 Identities=16% Similarity=0.075 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||||||+|.++...++.+.++|+|+|.|+ |++.|++....++...++.++++|+.+..+ +.++|+|+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l-------pe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL-------PEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC-------CccccEEE
Confidence 7899999999999877777777888999999986 889999888877777789999999987665 57899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEE
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i 143 (248)
+-..-. .+..+..+..++....+.|+|||.++
T Consensus 155 sE~~~~-~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 155 SEWMGY-GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CCCCBT-TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred eecccc-cccccchhhhHHHHHHhhCCCCceEC
Confidence 854322 33445568888999999999999886
No 132
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.52 E-value=2.8e-13 Score=107.99 Aligned_cols=101 Identities=12% Similarity=0.005 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++....+.. ++.+.++|+.+.. +.++||+|
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-------~~~~~D~i 136 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP-------SEPPFDGV 136 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC-------CCSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC-------ccCCcCEE
Confidence 4789999999999999888875 4459999999999999999887765432 2889999986643 24689999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
++... + ....+++++.++|+|||.+++...
T Consensus 137 ~~~~~-~-------~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 137 ISRAF-A-------SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ECSCS-S-------SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred EEecc-C-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 87542 1 256899999999999999998843
No 133
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.52 E-value=1.1e-13 Score=113.29 Aligned_cols=105 Identities=17% Similarity=0.152 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++.. +..+|+|+|+|+.|++.|++.....+.. ++.++++|+.+..+. ....++||+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~---~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQR---KDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTC---TTTTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhccc---ccccCCccE
Confidence 36789999999999998888753 4458999999999999999887765432 489999987442210 001468999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|+|... .+...+++.+.++|+|||.+++..
T Consensus 145 V~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 145 VTARAV--------ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEECC--------SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEecc--------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 998662 226789999999999999998873
No 134
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=5e-14 Score=116.89 Aligned_cols=130 Identities=17% Similarity=0.055 Sum_probs=92.6
Q ss_pred HHHHHHHHhcC--CCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHh---cCCCceEEEEEcCCCCC
Q 025754 20 AKTALIKIYSH--PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWEN---QRKNFIAEFFEADPCAE 93 (248)
Q Consensus 20 ~~~~li~~~~~--~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~---~~~~~~~~~~~~d~~~~ 93 (248)
+-..++..++. ++.+|||+|||+|..+..++... ..+++|+|+++.+++.|++.... .+...++.++++|+.+.
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 44556666654 67899999999999988887764 35899999999999999998766 54444589999999765
Q ss_pred chhhh-hcccCCceeEEEeccchhhh--------------cCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 94 NFETQ-MQEKANQADLVCCFQHLQMC--------------FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 94 ~~~~~-~~~~~~~fD~V~~~~~l~~~--------------~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..... ..-.+++||+|++....+.. .........+++.+.++|+|||.+++..+..
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 21000 00035789999997322210 0111236788999999999999999987654
No 135
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.51 E-value=2e-13 Score=110.60 Aligned_cols=124 Identities=9% Similarity=-0.098 Sum_probs=96.1
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
..+..+++++.+|||||||+|..+..++..+ ..+|+|+|+++.+++.|++.....+...++.+.++|..+...
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~------ 86 (230)
T 3lec_A 13 QKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE------ 86 (230)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------
T ss_pred HHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc------
Confidence 3466788899999999999999998888875 458999999999999999998887766679999999855322
Q ss_pred cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC-hhHHHHHHHH
Q 025754 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD-SSTIWAKYQK 158 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~-~~~~~~~~~~ 158 (248)
+..+||+|++... ..+-+..++......|+++|.|+++-.. .+.+++.+.+
T Consensus 87 ~~~~~D~IviaGm------Gg~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~ 138 (230)
T 3lec_A 87 EADNIDTITICGM------GGRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAA 138 (230)
T ss_dssp GGGCCCEEEEEEE------CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHH
T ss_pred cccccCEEEEeCC------chHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHH
Confidence 1237999875442 2345788999999999999999988443 3555555543
No 136
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.50 E-value=1.2e-13 Score=123.94 Aligned_cols=106 Identities=16% Similarity=0.081 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||||||+|..+..++..+..+|+|+|+|+ +++.|+++....+...++.++++|+.+.++ +++||+|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~-------~~~fD~I 228 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-------PEQVDII 228 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc-------CCCeEEE
Confidence 36789999999999998888777667999999998 999999888776554569999999976443 4689999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++...+++. . .+.....+..+.++|+|||.+++.
T Consensus 229 vs~~~~~~~-~-~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 229 ISEPMGYML-F-NERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp ECCCCHHHH-T-CHHHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchHhc-C-cHHHHHHHHHHHHhcCCCCEEEEE
Confidence 997765542 2 234556777899999999999854
No 137
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.50 E-value=2.3e-13 Score=111.20 Aligned_cols=124 Identities=9% Similarity=-0.063 Sum_probs=96.5
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
..+..+++++.+|||||||+|..+..++..+ ..+++|+|+++.+++.|++.....+...++.+.++|..+...
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~------ 86 (244)
T 3gnl_A 13 EKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE------ 86 (244)
T ss_dssp HHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------
T ss_pred HHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC------
Confidence 3567788899999999999999998888875 458999999999999999998877765669999999754321
Q ss_pred cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec-ChhHHHHHHHH
Q 025754 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP-DSSTIWAKYQK 158 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~-~~~~~~~~~~~ 158 (248)
+..+||+|++... ..+-+..++......|+++|.|+++-. ..+.+.+.+.+
T Consensus 87 ~~~~~D~Iviagm------Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~ 138 (244)
T 3gnl_A 87 KKDAIDTIVIAGM------GGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQ 138 (244)
T ss_dssp GGGCCCEEEEEEE------CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHH
T ss_pred ccccccEEEEeCC------chHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHH
Confidence 1235999876442 344578899999999999999999844 34555555554
No 138
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.50 E-value=1.9e-13 Score=110.40 Aligned_cols=107 Identities=13% Similarity=0.073 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCCCccHhHHHHcC--CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc-CCcee
Q 025754 31 PYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-ANQAD 107 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~fD 107 (248)
++.+|||||||+|..+..++... ..+++|+|+++.+++.|++++...+...++.++++|+.+. ...+... .++||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~fD 135 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS--LQQIENEKYEPFD 135 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--HHHHHHTTCCCCS
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--HHHHHhcCCCCcC
Confidence 67899999999999999888762 4599999999999999999887666545699999997431 1111111 26799
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
+|++..... ....+++.+.++|+|||++++..
T Consensus 136 ~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 136 FIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 998876533 25678999999999999999873
No 139
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.50 E-value=7e-14 Score=120.51 Aligned_cols=118 Identities=19% Similarity=0.220 Sum_probs=92.0
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
.+++.+ ..++.+|||+|||+|..+..++.... .+++|+|+|+.|++.|+++....+. ...++++|+...
T Consensus 187 ~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~------- 257 (343)
T 2pjd_A 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSE------- 257 (343)
T ss_dssp HHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTT-------
T ss_pred HHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEcccccc-------
Confidence 344444 33677999999999999998887753 4899999999999999998876543 356788887542
Q ss_pred ccCCceeEEEeccchhhhc-CCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 101 EKANQADLVCCFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~-~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
.+++||+|+|...+|+.. .+.+....+++++.++|+|||.+++..+...
T Consensus 258 -~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 258 -VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp -CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred -ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 256899999998877421 1345678999999999999999999876653
No 140
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=1.7e-13 Score=109.93 Aligned_cols=104 Identities=13% Similarity=-0.009 Sum_probs=82.3
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC-C-CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL-I-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~-~-~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||+|||+|..+..++... . .+++|+|+|+.+++.|+++....+. .++.+.++|+..... ..++|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~------~~~~f 147 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGTLGYE------PLAPY 147 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGGGCCG------GGCCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcccCCC------CCCCe
Confidence 4578899999999999998887763 2 5999999999999999998765432 138899998743211 24689
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|+|++..+++++. +++.++|+|||.+++.+++.
T Consensus 148 D~v~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 148 DRIYTTAAGPKIP----------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEEESSBBSSCC----------HHHHHTEEEEEEEEEEESSS
T ss_pred eEEEECCchHHHH----------HHHHHHcCCCcEEEEEECCC
Confidence 9999999888732 47889999999999987764
No 141
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.50 E-value=1.6e-13 Score=119.65 Aligned_cols=120 Identities=17% Similarity=0.158 Sum_probs=90.2
Q ss_pred CCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCC--ceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 31 PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKN--FIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
++.+|||+|||+|..+..++... ..+|+|+|+|+.+++.|+++....+.. .++.+.++|+.+. + .+++||
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~-~------~~~~fD 294 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG-V------EPFRFN 294 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT-C------CTTCEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc-C------CCCCee
Confidence 56899999999999999998874 469999999999999999988765422 2488899998662 2 357899
Q ss_pred EEEeccchhhhcC-CHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHH
Q 025754 108 LVCCFQHLQMCFE-TEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQ 157 (248)
Q Consensus 108 ~V~~~~~l~~~~~-~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~ 157 (248)
+|+|...+|.... .......+++++.++|+|||.+++...........+.
T Consensus 295 ~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~ 345 (375)
T 4dcm_A 295 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLK 345 (375)
T ss_dssp EEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHH
T ss_pred EEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHH
Confidence 9999887774211 1223457899999999999999998766544444443
No 142
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=2.6e-13 Score=111.73 Aligned_cols=106 Identities=9% Similarity=0.037 Sum_probs=83.1
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
++.+|||||||+|..+..++.. + ..+|+|+|+|+.+++.|++++...+...++.++++|+.+ ..... ...++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~--~l~~~-~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ--SLESL-GECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH--HHHTC-CSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHhc-CCCCCeEE
Confidence 6789999999999999888876 2 469999999999999999998776654569999999743 11111 01348999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|++..... ....+++++.++|+|||++++..
T Consensus 140 V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 140 IFIDADKP-------NNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEECSCGG-------GHHHHHHHHHHTCCTTCEEEEEC
T ss_pred EEECCchH-------HHHHHHHHHHHhcCCCeEEEEeC
Confidence 98865332 35678999999999999999873
No 143
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.49 E-value=3e-13 Score=109.35 Aligned_cols=122 Identities=12% Similarity=-0.000 Sum_probs=94.6
Q ss_pred HHHHhcCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc
Q 025754 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
.+..+++++.+|||||||+|..+..++..+ ..+|+|+|+++.+++.|++.....+...++.+.++|..+. + +
T Consensus 8 ~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l------~ 80 (225)
T 3kr9_A 8 LVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-F------E 80 (225)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-C------C
T ss_pred HHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-c------c
Confidence 456778899999999999999998888875 4589999999999999999988777655799999997431 1 1
Q ss_pred CC-ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh-hHHHHHHHH
Q 025754 103 AN-QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS-STIWAKYQK 158 (248)
Q Consensus 103 ~~-~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~-~~~~~~~~~ 158 (248)
.+ +||+|++... ..+.+..++......|+++|.+++.-... +.+.+.+.+
T Consensus 81 ~~~~~D~IviaG~------Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~ 132 (225)
T 3kr9_A 81 ETDQVSVITIAGM------GGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQD 132 (225)
T ss_dssp GGGCCCEEEEEEE------CHHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHH
T ss_pred cCcCCCEEEEcCC------ChHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHH
Confidence 22 6998876542 23447889999999999999999874433 555555543
No 144
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.49 E-value=2.1e-13 Score=116.88 Aligned_cols=103 Identities=18% Similarity=0.142 Sum_probs=86.4
Q ss_pred CeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEe
Q 025754 33 VTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (248)
Q Consensus 33 ~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (248)
.+|||+|||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.++++|+.+ ++ +.+||+|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------~~~~D~v~~ 239 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV-------PSNGDIYLL 239 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC-------CSSCSEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC-------CCCCCEEEE
Confidence 89999999999999888776 3458999999 99999999887654323359999999866 33 367999999
Q ss_pred ccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
..++|+ .+.+....+++++.+.|+|||.+++..
T Consensus 240 ~~vl~~--~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 240 SRIIGD--LDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp ESCGGG--CCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred chhccC--CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999997 467778899999999999999999873
No 145
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.49 E-value=2.1e-13 Score=117.68 Aligned_cols=109 Identities=18% Similarity=0.072 Sum_probs=81.8
Q ss_pred HHHHh-cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 24 li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
++..+ .+++.+|||||||+|..+..++... ..+++++|+ +.++. +++....+...++.++++|+. .++
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~------ 245 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-REV------ 245 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-TCC------
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-CCC------
Confidence 44443 3467899999999999999887763 348999999 44544 222222222345999999986 222
Q ss_pred cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
+ +||+|++..++|+ .+.++...++++++++|||||.+++..
T Consensus 246 -p-~~D~v~~~~vlh~--~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 246 -P-HADVHVLKRILHN--WGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp -C-CCSEEEEESCGGG--SCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred -C-CCcEEEEehhccC--CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 8999999999998 567777899999999999999999873
No 146
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.49 E-value=1.7e-13 Score=111.49 Aligned_cols=108 Identities=12% Similarity=0.044 Sum_probs=82.2
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
+.++.+|||+|||+|.++..++.. +..+++|+|+|+.|++.+.+..... .++.++++|+.+.... +..+++|
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~---~~~~~~~ 148 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKY---RMLIAMV 148 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGG---GGGCCCE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhh---cccCCcE
Confidence 457889999999999999988876 3469999999999888777666543 2388999999764311 1135789
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|+|++... ..+....++.++.++|+|||.+++.+..
T Consensus 149 D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 149 DVIFADVA------QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp EEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 99998553 2334566788999999999999997543
No 147
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.49 E-value=1.3e-13 Score=112.06 Aligned_cols=105 Identities=16% Similarity=0.061 Sum_probs=80.4
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
+.++.+|||+|||+|..+..++.. +..+|+|+|+|+.|++.|+++.... .++.++++|+..... ... ..++||
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~--~~~-~~~~~D 145 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQE--YAN-IVEKVD 145 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGG--GTT-TSCCEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCccc--ccc-cCccEE
Confidence 347889999999999999888876 4469999999999999998876543 348899999876211 000 136899
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|++. +........+++++.+.|+|||.+++.
T Consensus 146 ~v~~~------~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYED------VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEC------CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEe------cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99732 123344577899999999999999986
No 148
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.48 E-value=2.8e-15 Score=122.60 Aligned_cols=102 Identities=21% Similarity=0.187 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++..+ .+|+|+|+|+.|++.|+++....+...++.++++|+.+.. .+++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-------SFLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-------GGCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-------ccCCCCEEE
Confidence 78999999999999999998876 5999999999999999998876554346899999984422 257899999
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEE
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLG 144 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 144 (248)
+...+|+. ......+.++.++|+|||.+++
T Consensus 150 ~~~~~~~~----~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 150 LSPPWGGP----DYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp ECCCCSSG----GGGGSSSBCTTTSCSSCHHHHH
T ss_pred ECCCcCCc----chhhhHHHHHHhhcCCcceeHH
Confidence 98877752 2233366788999999998654
No 149
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.48 E-value=4.3e-14 Score=114.83 Aligned_cols=120 Identities=24% Similarity=0.165 Sum_probs=80.3
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCC-hHHHHHH---HHHHHhcCCCceEEEEEcCCCCCch
Q 025754 21 KTALIKIYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVA-TSGIGEA---RDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 21 ~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis-~~~l~~a---~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
...++.....++.+|||||||+|..+..++.. +..+|+|+|+| +.|++.| +++....+. .++.+.++|+...+.
T Consensus 14 ~~~~~~~~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 14 KDELTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPF 92 (225)
T ss_dssp HHHHHHHHTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCG
T ss_pred HHHHHHHhCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhh
Confidence 33455556678899999999999999888754 34489999999 7777776 555444332 248899999866432
Q ss_pred hhhhcccCCceeEEEeccchhhhcCC-HHHHHHHHHHHhccccCCcEEEEEe
Q 025754 96 ETQMQEKANQADLVCCFQHLQMCFET-EERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
. ....+|.|.+.+........ ......+++++.++|||||.+++.+
T Consensus 93 ~-----~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 93 E-----LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp G-----GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred h-----ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 1 12456666655432210000 0112468999999999999999843
No 150
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.48 E-value=1.9e-13 Score=110.49 Aligned_cols=106 Identities=17% Similarity=0.081 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc--CCce
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK--ANQA 106 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~f 106 (248)
++.+|||||||+|..+..++.. + ..+|+++|+++.+++.|++++...+...++.++++|+.+. .+..... .++|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT--LAELIHAGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--HHHHHTTTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH--HHHhhhccCCCCc
Confidence 6789999999999999988876 2 4699999999999999999987766555699999997431 1111100 1789
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|++.... .....+++++.++|+|||++++.
T Consensus 142 D~v~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 142 DLIYIDADK-------ANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECCCH-------HHHHHHHHHHHHhcCCCcEEEEe
Confidence 999875532 23667899999999999999987
No 151
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.48 E-value=2.9e-13 Score=118.46 Aligned_cols=123 Identities=11% Similarity=0.068 Sum_probs=91.7
Q ss_pred HHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCc-eEEEEEcCCCCCchhhhhcccC
Q 025754 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
+..++.++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|++....++... ++.++++|+.+ +...+....
T Consensus 206 ~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~--~l~~~~~~~ 283 (385)
T 2b78_A 206 LINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD--YFKYARRHH 283 (385)
T ss_dssp HHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH--HHHHHHHTT
T ss_pred HHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHH--HHHHHHHhC
Confidence 334436788999999999999999988777799999999999999999887665433 58999999844 111111124
Q ss_pred CceeEEEeccch-----hhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 104 NQADLVCCFQHL-----QMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 104 ~~fD~V~~~~~l-----~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
.+||+|++.... ............++..+.++|+|||++++.+...
T Consensus 284 ~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 284 LTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp CCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 589999984322 2223335567788999999999999999986555
No 152
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.48 E-value=1.3e-13 Score=111.62 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=82.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC------CCeEEEEeCChHHHHHHHHHHHhcCC----CceEEEEEcCCCCCchhhh
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL------IANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQ 98 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~------~~~v~giDis~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~ 98 (248)
..++.+|||||||+|..+..++... ..+|+|+|+++.+++.|+++....+. ..++.++++|+........
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 5678999999999999888887653 24999999999999999998765431 2348899999865330000
Q ss_pred hcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
. ..++||+|++...+++ +++++.++|+|||.+++.++.
T Consensus 158 ~--~~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 K--ELGLFDAIHVGASASE----------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp H--HHCCEEEEEECSBBSS----------CCHHHHHHEEEEEEEEEEEEE
T ss_pred c--cCCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEEcc
Confidence 0 2468999999887775 246788999999999998664
No 153
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.48 E-value=2.2e-13 Score=110.29 Aligned_cols=103 Identities=14% Similarity=0.088 Sum_probs=81.4
Q ss_pred CCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCC-ceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 32 YVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
+.+|||||||+|..+..++.. + .++++++|+|+.+++.|++.+...+.. .++.++++|+.+. ...+ .+++||+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~--l~~~--~~~~fD~ 132 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV--MSRL--ANDSYQL 132 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH--GGGS--CTTCEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH--HHHh--cCCCcCe
Confidence 459999999999999888774 2 469999999999999999998876654 5699999987431 1111 2578999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|++..... ....+++.+.++|+|||++++.
T Consensus 133 V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 133 VFGQVSPM-------DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp EEECCCTT-------THHHHHHHHHHHEEEEEEEEET
T ss_pred EEEcCcHH-------HHHHHHHHHHHHcCCCcEEEEe
Confidence 98876433 2566899999999999999985
No 154
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=2e-13 Score=110.50 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=81.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CC-CeEEEEeCChHHHHHHHHHHHhcCC----CceEEEEEcCCCCCchhhhhccc
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~-~~v~giDis~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
..++.+|||+|||+|..+..++.. +. .+|+|+|+++.+++.|+++....+. ..++.+.++|+..... .
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~ 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA------E 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG------G
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc------c
Confidence 558899999999999999888765 33 4999999999999999988765321 1248899999864332 2
Q ss_pred CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
.++||+|++...++. +++++.++|+|||.++++++.
T Consensus 149 ~~~fD~i~~~~~~~~----------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 149 EAPYDAIHVGAAAPV----------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GCCEEEEEECSBBSS----------CCHHHHHTEEEEEEEEEEESC
T ss_pred CCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEEec
Confidence 568999999887665 235788999999999998665
No 155
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.47 E-value=1.5e-13 Score=113.16 Aligned_cols=114 Identities=16% Similarity=0.064 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCCccHhHHHHc---CCCeEEEEeCChHHHHHHHHHHHhc---CCCce----------------------
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQ---RKNFI---------------------- 82 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~---~~~~v~giDis~~~l~~a~~~~~~~---~~~~~---------------------- 82 (248)
++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|++..... +...+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999998888765 2348999999999999999765433 21111
Q ss_pred ---EE-------------EEEcCCCCCchhhhhcccCCceeEEEeccchhhhcC-----CHHHHHHHHHHHhccccCCcE
Q 025754 83 ---AE-------------FFEADPCAENFETQMQEKANQADLVCCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGY 141 (248)
Q Consensus 83 ---~~-------------~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~-----~~~~~~~~l~~~~~~LkpgG~ 141 (248)
+. +.++|+.+....... ....+||+|+|...+++... ..+....+++++.++|+|||+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAV-LAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHH-HTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhccccccccccceeecccccccccccc-cCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 44 899998663210000 01348999999866554221 146788999999999999999
Q ss_pred EEEE
Q 025754 142 FLGI 145 (248)
Q Consensus 142 ~i~~ 145 (248)
++++
T Consensus 210 l~~~ 213 (250)
T 1o9g_A 210 IAVT 213 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9984
No 156
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.47 E-value=9.6e-14 Score=111.72 Aligned_cols=111 Identities=13% Similarity=0.024 Sum_probs=77.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHh----cCCCceEEEEEcCCCCCchhhhhcccC
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWEN----QRKNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
..++.+|||+|||+|..+..++... ..+|+|+|+|+.|++.+.+.... .+ ..++.++++|+.+.++ .+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~~~v~~~~~d~~~l~~------~~ 97 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG-LPNLLYLWATAERLPP------LS 97 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-CTTEEEEECCSTTCCS------CC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-CCceEEEecchhhCCC------CC
Confidence 5678899999999999999998873 45999999999999864433221 21 1258999999987665 24
Q ss_pred CceeEEEeccchhhhc-CCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 104 NQADLVCCFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~-~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
+. |.|.+.+...... ...++...+++++.++|||||.+++++.
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 44 6665333211100 0112237899999999999999999643
No 157
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.47 E-value=8.8e-13 Score=110.15 Aligned_cols=120 Identities=13% Similarity=0.127 Sum_probs=88.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++....+.. ++.++++|+.+. + ..++||+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~-~------~~~~fD~ 179 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSA-L------AGQQFAM 179 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGG-G------TTCCEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhh-c------ccCCccE
Confidence 56789999999999999888755 4459999999999999999987665432 489999998552 2 2568999
Q ss_pred EEeccchhhh-----------cCC----------HHHHHHHHHHHhccccCCcEEEEEecCh--hHHHHHHH
Q 025754 109 VCCFQHLQMC-----------FET----------EERARRLLQNVSSLLKPGGYFLGITPDS--STIWAKYQ 157 (248)
Q Consensus 109 V~~~~~l~~~-----------~~~----------~~~~~~~l~~~~~~LkpgG~~i~~~~~~--~~~~~~~~ 157 (248)
|++....+.. +++ ......+++++.++|+|||.+++..... ..+.+.+.
T Consensus 180 Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~ 251 (276)
T 2b3t_A 180 IVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFI 251 (276)
T ss_dssp EEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHH
T ss_pred EEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHH
Confidence 9997422210 011 1456889999999999999999985432 44444443
No 158
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.47 E-value=2.1e-13 Score=112.26 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=87.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||+|||+|..+..++.. + ..+++|+|+|+.+++.|+++....+...++.+.++|+.+. + .+++|
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 163 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-I------EEENV 163 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-C------CCCSE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-c------CCCCc
Confidence 458899999999999999988876 3 4699999999999999999887665444589999998643 2 35789
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHH
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~ 153 (248)
|+|++... +...+++++.++|+|||.+++..+..+...
T Consensus 164 D~v~~~~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 201 (255)
T 3mb5_A 164 DHVILDLP---------QPERVVEHAAKALKPGGFFVAYTPCSNQVM 201 (255)
T ss_dssp EEEEECSS---------CGGGGHHHHHHHEEEEEEEEEEESSHHHHH
T ss_pred CEEEECCC---------CHHHHHHHHHHHcCCCCEEEEEECCHHHHH
Confidence 99987431 234679999999999999999988775443
No 159
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.46 E-value=3.9e-13 Score=116.29 Aligned_cols=126 Identities=18% Similarity=0.179 Sum_probs=93.2
Q ss_pred HHHHHHHHh-cCCCCeEEEEcCCCCccHhHHHHcC--CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchh
Q 025754 20 AKTALIKIY-SHPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (248)
Q Consensus 20 ~~~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~--~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (248)
+...++... ..++.+|||+|||+|..+..++... ...++|+|+|+.|++.|++.....+.. ++.+.++|+.+.+.
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~- 268 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPR- 268 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGG-
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcc-
Confidence 333344433 4578899999999999998887743 358999999999999999988776644 68999999866443
Q ss_pred hhhcccCCceeEEEeccchhhhcCC----HHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 97 TQMQEKANQADLVCCFQHLQMCFET----EERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~~~~~----~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
....||+|++.......... ......+++++.++|+|||.+++.+++...+
T Consensus 269 -----~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~ 323 (354)
T 3tma_A 269 -----FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALL 323 (354)
T ss_dssp -----TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHH
T ss_pred -----ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHH
Confidence 34668999996533221111 1224789999999999999999999986543
No 160
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.46 E-value=5e-13 Score=108.80 Aligned_cols=107 Identities=13% Similarity=0.032 Sum_probs=77.0
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
+.++.+|||+|||+|..+..++.. +.+.|+|+|+|+.|++...+..... .++.++++|+........ ..++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~---~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKS---VVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTT---TCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhc---cccce
Confidence 458999999999999999888765 3569999999999976544333222 238899999876432111 24689
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|+|++..+. ......+..++.+.|||||.|++.+.
T Consensus 148 D~I~~d~a~------~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 148 DVLYVDIAQ------PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp EEEEECCCC------TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEecCCC------hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 999987643 22334455667779999999999843
No 161
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.46 E-value=2.7e-13 Score=115.64 Aligned_cols=104 Identities=12% Similarity=0.010 Sum_probs=82.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCC--CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~--~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||||||+|..+..++.... .+|+|+|+|+.+++.|+++....+.. ++.+.++|+.+... ..++|
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~------~~~~f 145 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVP------EFSPY 145 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG------GGCCE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccc------cCCCe
Confidence 45889999999999999888876532 46999999999999999988765432 38899999855332 24689
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|+|++..+++++. +++.+.|+|||.+++.+...
T Consensus 146 D~Iv~~~~~~~~~----------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 146 DVIFVTVGVDEVP----------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp EEEEECSBBSCCC----------HHHHHHEEEEEEEEEEBCBG
T ss_pred EEEEEcCCHHHHH----------HHHHHhcCCCcEEEEEECCC
Confidence 9999999888732 46788999999999986543
No 162
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.46 E-value=5.8e-13 Score=111.87 Aligned_cols=111 Identities=15% Similarity=0.061 Sum_probs=83.2
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce---e
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA---D 107 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f---D 107 (248)
++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|++.....+...++.++++|+.+. + .++| |
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~-------~~~f~~~D 194 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-F-------KEKFASIE 194 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-G-------GGGTTTCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-c-------ccccCCCC
Confidence 567999999999999988887744599999999999999999887765444599999998652 2 2468 9
Q ss_pred EEEeccchhh--------h-cCCHH------HHHHHHHHHh-ccccCCcEEEEEecCh
Q 025754 108 LVCCFQHLQM--------C-FETEE------RARRLLQNVS-SLLKPGGYFLGITPDS 149 (248)
Q Consensus 108 ~V~~~~~l~~--------~-~~~~~------~~~~~l~~~~-~~LkpgG~~i~~~~~~ 149 (248)
+|+++--... + +++.. +-..+++++. +.|+|||.+++.+...
T Consensus 195 ~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 195 MILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp EEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred EEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 9999621110 0 12111 1126889999 9999999999986654
No 163
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.46 E-value=3.3e-13 Score=109.75 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
++.+|||+|||+|..+..++... ..+++++|+++.+++.|++++...+...++.++++|+.+... ... .+++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~-~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE--KLE-LYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH--HHT-TSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH--hcc-cCCCccEE
Confidence 67899999999999998887763 469999999999999999988765543458999999854211 110 14689999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++....+ ....+++++.++|+|||.+++.
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 9877544 3678899999999999999987
No 164
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.46 E-value=2.6e-13 Score=111.83 Aligned_cols=104 Identities=13% Similarity=-0.004 Sum_probs=81.2
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.|++.....+.. ++.++++|+.+.... ....++||+|
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~---~~~~~~fD~I 155 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLARE---AGHREAYARA 155 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTS---TTTTTCEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcc---cccCCCceEE
Confidence 5789999999999998888765 4569999999999999999988766532 389999997442210 0024789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
++.... +...+++.+.++|+|||.+++..
T Consensus 156 ~s~a~~--------~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 156 VARAVA--------PLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EEESSC--------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EECCcC--------CHHHHHHHHHHHcCCCeEEEEEe
Confidence 986521 25678999999999999998864
No 165
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=2.5e-14 Score=114.23 Aligned_cols=114 Identities=14% Similarity=0.043 Sum_probs=65.9
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++....+. ++.++++|+.+ .+.. .....++||+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~-~~~~-~~~~~~~fD~ 104 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIE-WLIE-RAERGRPWHA 104 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-HHHH-HHHTTCCBSE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHh-hhhh-hhhccCcccE
Confidence 578899999999999999888874 34899999999999999988765542 46777777644 2210 0002378999
Q ss_pred EEeccchhhhc----------------------CCHHHHHHHHHHHhccccCCcE-EEEEec
Q 025754 109 VCCFQHLQMCF----------------------ETEERARRLLQNVSSLLKPGGY-FLGITP 147 (248)
Q Consensus 109 V~~~~~l~~~~----------------------~~~~~~~~~l~~~~~~LkpgG~-~i~~~~ 147 (248)
|++....+..- ...+....+++++.++|+|||+ +++.++
T Consensus 105 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 105 IVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp EEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred EEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 99964332100 0011127889999999999999 665544
No 166
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.45 E-value=3.3e-13 Score=111.10 Aligned_cols=109 Identities=13% Similarity=0.072 Sum_probs=87.3
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhc-CCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|++..... + ..++.+.++|+.+.++ .+++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~------~~~~ 166 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAEL------EEAA 166 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCC------CTTC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCC------CCCC
Confidence 458899999999999999888876 3 469999999999999999987654 3 2358999999866433 3578
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHH
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~ 153 (248)
||+|++.. . +...+++++.++|+|||.+++..++...+.
T Consensus 167 ~D~v~~~~------~---~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 205 (258)
T 2pwy_A 167 YDGVALDL------M---EPWKVLEKAALALKPDRFLVAYLPNITQVL 205 (258)
T ss_dssp EEEEEEES------S---CGGGGHHHHHHHEEEEEEEEEEESCHHHHH
T ss_pred cCEEEECC------c---CHHHHHHHHHHhCCCCCEEEEEeCCHHHHH
Confidence 99998732 1 234789999999999999999998875543
No 167
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.45 E-value=1.1e-12 Score=115.77 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=81.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHH-------HHHHHhcCCC-ceEEEEEcCCCCCchhhhh
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEA-------RDTWENQRKN-FIAEFFEADPCAENFETQM 99 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a-------~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~ 99 (248)
..++.+|||||||+|..+..++.. +..+|+|+|+++.+++.| +++....+.. .++.++++|....... +
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~--~ 317 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNR--V 317 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHH--H
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccc--c
Confidence 457899999999999999888875 556899999999999988 6666554421 3588988865432110 0
Q ss_pred cccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
....++||+|++...++ .++...++.++.+.|+|||.+++.
T Consensus 318 ~~~~~~FDvIvvn~~l~-----~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 318 AELIPQCDVILVNNFLF-----DEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHGGGCSEEEECCTTC-----CHHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccCCCCEEEEeCccc-----cccHHHHHHHHHHhCCCCeEEEEe
Confidence 00136899999865442 245677889999999999999986
No 168
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.45 E-value=2.8e-13 Score=113.17 Aligned_cols=107 Identities=14% Similarity=0.059 Sum_probs=85.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhc-CCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
..++.+|||+|||+|..+..++.. +..+++|+|+++.+++.|+++.... + ..++.+.++|+.+ .+ .+++
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~-~~------~~~~ 179 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-IGNVRTSRSDIAD-FI------SDQM 179 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-CTTEEEECSCTTT-CC------CSCC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-CCcEEEEECchhc-cC------cCCC
Confidence 347889999999999999888876 3459999999999999999988655 3 2348999999866 22 3568
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
||+|++.. ++...+++++.++|+|||.+++.+++....
T Consensus 180 fD~Vi~~~---------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 217 (275)
T 1yb2_A 180 YDAVIADI---------PDPWNHVQKIASMMKPGSVATFYLPNFDQS 217 (275)
T ss_dssp EEEEEECC---------SCGGGSHHHHHHTEEEEEEEEEEESSHHHH
T ss_pred ccEEEEcC---------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 99998722 123578999999999999999999887543
No 169
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.44 E-value=5.8e-13 Score=107.85 Aligned_cols=106 Identities=17% Similarity=0.102 Sum_probs=81.1
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||+|||+|..+..++.. + .++|+|+|+|+.|++.+++..... .++.++++|+.+...... ..++|
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~---~~~~~ 144 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRA---LVPKV 144 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTT---TCCCE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhc---ccCCc
Confidence 347889999999999999988865 3 369999999999999988876543 248999999876322111 24589
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|+|++... .......++.++.++|+|||.+++.+
T Consensus 145 D~v~~~~~------~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 145 DVIFEDVA------QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEECCC------STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCC------CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99997653 22234556999999999999999873
No 170
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.44 E-value=6.1e-13 Score=114.11 Aligned_cols=117 Identities=15% Similarity=0.082 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCc-eEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|++.....+... ++.++++|+.+. ........++||+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~--l~~~~~~~~~fD~ 228 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKF--IQREERRGSTYDI 228 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHH--HHHHHHHTCCBSE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHH--HHHHHhcCCCceE
Confidence 4678999999999999999988776 99999999999999999887655433 488999997442 1111111468999
Q ss_pred EEeccc---hh---hhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQH---LQ---MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~---l~---~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|++... .. ..+...+....++..+.++|+|||+++++..+.
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 998431 11 011235567889999999999999988775443
No 171
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.44 E-value=1.4e-12 Score=111.91 Aligned_cols=116 Identities=17% Similarity=0.063 Sum_probs=86.1
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CC-CeEEEEeCChHHHHHHHHHHHhcC----------CCceEEEEEcCCCCCchh
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATSGIGEARDTWENQR----------KNFIAEFFEADPCAENFE 96 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~-~~v~giDis~~~l~~a~~~~~~~~----------~~~~~~~~~~d~~~~~~~ 96 (248)
..++.+|||+|||+|..+..++.. +. .+++|+|+++.+++.|+++....+ ...++.+.++|+.+...
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~- 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE- 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc-
Confidence 568899999999999999888875 43 699999999999999999876421 11358999999876421
Q ss_pred hhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHH
Q 025754 97 TQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQ 157 (248)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~ 157 (248)
.+ .+++||+|++..... ..++.++.++|+|||.+++..++...+...+.
T Consensus 182 -~~--~~~~fD~V~~~~~~~---------~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 230 (336)
T 2b25_A 182 -DI--KSLTFDAVALDMLNP---------HVTLPVFYPHLKHGGVCAVYVVNITQVIELLD 230 (336)
T ss_dssp ---------EEEEEECSSST---------TTTHHHHGGGEEEEEEEEEEESSHHHHHHHHH
T ss_pred -cc--CCCCeeEEEECCCCH---------HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH
Confidence 01 246799998854322 22789999999999999999988876654443
No 172
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.44 E-value=7.8e-13 Score=108.22 Aligned_cols=110 Identities=11% Similarity=0.048 Sum_probs=87.3
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++.. ..+++++|+++.+++.|+++....+...++.+.++|+.+..+ .+++||+
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~D~ 161 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV------PEGIFHA 161 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC------CTTCBSE
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc------CCCcccE
Confidence 347889999999999999888877 559999999999999999988665433458899999866432 2467999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHH
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~ 154 (248)
|++... +...+++++.++|+|||.+++..++.+.+.+
T Consensus 162 v~~~~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~ 198 (248)
T 2yvl_A 162 AFVDVR---------EPWHYLEKVHKSLMEGAPVGFLLPTANQVIK 198 (248)
T ss_dssp EEECSS---------CGGGGHHHHHHHBCTTCEEEEEESSHHHHHH
T ss_pred EEECCc---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHH
Confidence 987431 2346789999999999999999998755443
No 173
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=3.4e-13 Score=117.03 Aligned_cols=107 Identities=14% Similarity=0.203 Sum_probs=80.3
Q ss_pred HHHHhcCCCCeEEEEcCC------CCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCch
Q 025754 24 LIKIYSHPYVTVCDLYCG------AGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 24 li~~~~~~~~~VLDlGcG------~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
++..+..++.+||||||| +|+.+..++.. +.++|+|+|+|+.|.. . ..++.|+++|+.+.++
T Consensus 209 lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~------~----~~rI~fv~GDa~dlpf 278 (419)
T 3sso_A 209 HFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV------D----ELRIRTIQGDQNDAEF 278 (419)
T ss_dssp HHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG------C----BTTEEEEECCTTCHHH
T ss_pred HHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh------c----CCCcEEEEecccccch
Confidence 444455577899999999 77766666554 4569999999999831 1 1249999999988666
Q ss_pred hhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 96 ETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
...+...+++||+|+|..+ |+ ..+...+++++.++|||||++++.
T Consensus 279 ~~~l~~~d~sFDlVisdgs-H~----~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDGS-HI----NAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHHCCEEEEEECSC-CC----HHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhhcccCCccEEEECCc-cc----chhHHHHHHHHHHhcCCCeEEEEE
Confidence 4322222578999998753 54 456788999999999999999997
No 174
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.44 E-value=4.7e-13 Score=109.12 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=81.4
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++.....+|+|+|+++.+++.|+++....+.. ++.+.++|+. ..+. ...+||+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~-~~~~-----~~~~fD~ 161 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGS-KGFP-----PKAPYDV 161 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGG-GCCG-----GGCCEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcc-cCCC-----CCCCccE
Confidence 4578899999999999998887763268999999999999999988765432 3889999972 2221 1346999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|++..+++++. .++.+.|+|||.+++.+++.
T Consensus 162 Ii~~~~~~~~~----------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 162 IIVTAGAPKIP----------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp EEECSBBSSCC----------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH----------HHHHHhcCCCcEEEEEEecC
Confidence 99998887622 36788999999999998764
No 175
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.43 E-value=8.6e-13 Score=108.37 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHHHhc--------CCCceEEEEEcCCCCCchhhhhc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQ--------RKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
.++.+|||||||+|.++..++.... ..++|+|+|+.+++.|+++.... +. .++.++++|+.+. +...+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~-l~~~~- 124 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKF-LPNFF- 124 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSC-GGGTS-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHH-HHHhc-
Confidence 3678999999999999999887753 48999999999999998876543 21 2589999998652 11111
Q ss_pred ccCCceeEEEeccchhhhcCCHH-----HHHHHHHHHhccccCCcEEEEEecCh
Q 025754 101 EKANQADLVCCFQHLQMCFETEE-----RARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~-----~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..+++|.|++.+.-.+ +.... ....++.++.++|+|||.+++.+...
T Consensus 125 -~~~~~d~v~~~~p~p~-~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~ 176 (246)
T 2vdv_E 125 -EKGQLSKMFFCFPDPH-FKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVK 176 (246)
T ss_dssp -CTTCEEEEEEESCCCC-------CSSCCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred -cccccCEEEEECCCcc-cccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccH
Confidence 3578999875442111 00000 01479999999999999999976654
No 176
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.43 E-value=9.9e-13 Score=109.75 Aligned_cols=113 Identities=15% Similarity=0.071 Sum_probs=88.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhc-C-CCceEEEEEcCCCCCchhhhhcccCC
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-R-KNFIAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~-~-~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
..++.+|||+|||+|..+..++.. +..+++++|+++.+++.|++..... + ...++.+.++|+.+..+ .++
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~------~~~ 170 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL------PDG 170 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC------CTT
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC------CCC
Confidence 458899999999999999888875 3469999999999999999887654 2 12348899999866543 356
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHH
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 156 (248)
+||+|++... +...+++++.++|+|||.+++.+++.+.+.+..
T Consensus 171 ~~D~v~~~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 213 (280)
T 1i9g_A 171 SVDRAVLDML---------APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIV 213 (280)
T ss_dssp CEEEEEEESS---------CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHH
T ss_pred ceeEEEECCc---------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Confidence 8999988331 133689999999999999999999876554433
No 177
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.43 E-value=3.2e-13 Score=108.33 Aligned_cols=87 Identities=18% Similarity=0.224 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..+. .+++|+|+|+. + +.+.++|+.+.++ .+++||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~------------~----~~~~~~d~~~~~~------~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL------------D----PRVTVCDMAQVPL------EDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS------------S----TTEEESCTTSCSC------CTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC------------C----ceEEEeccccCCC------CCCCEeEE
Confidence 467899999999998776662 48999999987 1 5588999877554 46789999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
++..++|+ .+...+++++.++|+|||.+++..+
T Consensus 120 ~~~~~l~~-----~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 120 VFCLSLMG-----TNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp EEESCCCS-----SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEehhccc-----cCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 99998873 2467899999999999999998743
No 178
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.43 E-value=2e-13 Score=112.13 Aligned_cols=106 Identities=12% Similarity=0.038 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCCce
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~f 106 (248)
++.+|||||||+|..+..++.. ..++|+|+|+++.+++.|++++...+...++.++++|+.+. ...+.. ..++|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~--l~~~~~~~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT--LHSLLNEGGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH--HHHHHHHHCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--HHHHhhccCCCCE
Confidence 5789999999999999988875 24699999999999999999887766555699999997432 111100 14789
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|++.... .....+++++.++|+|||++++.
T Consensus 138 D~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 138 DFIFIDADK-------TNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEESCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCCh-------HHhHHHHHHHHHhcCCCeEEEEE
Confidence 999886642 23567899999999999999986
No 179
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.43 E-value=6.3e-13 Score=106.41 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=80.1
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
++.+|||+|||+|..+..++.. + ..+++++|+|+.+++.|++++...+...++.++++|+.+. ++..++ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-----AAGQRD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH-----HTTCCS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH-----hccCCC-CCE
Confidence 6789999999999999888765 2 4699999999999999999887655444589999987431 111245 999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|++.... .....+++++.++|+|||++++.
T Consensus 130 v~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 130 LFMDCDV-------FNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEEETTT-------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEcCCh-------hhhHHHHHHHHHhcCCCeEEEEE
Confidence 9886432 23567899999999999999985
No 180
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.42 E-value=7.9e-13 Score=111.51 Aligned_cols=111 Identities=12% Similarity=0.109 Sum_probs=80.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcC----CCceEEEEEcCCCCCchhhhhcccC
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQR----KNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
.+++.+|||||||+|..+..++.. +..+++++|+|+.+++.|++.+...+ ...++.++++|+.... ....
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l-----~~~~ 155 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV-----NQTS 155 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC--------CCC
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHH-----hhcC
Confidence 346789999999999999888876 45689999999999999999765421 1235889999986521 1135
Q ss_pred CceeEEEeccchhhhcCCHHHH--HHHHHHHhccccCCcEEEEEe
Q 025754 104 NQADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~LkpgG~~i~~~ 146 (248)
++||+|++....+. .....+ .++++.+.++|+|||++++..
T Consensus 156 ~~fDvIi~D~~~p~--~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 156 QTFDVIISDCTDPI--GPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCCCcc--CcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 78999999654432 122222 789999999999999999974
No 181
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.42 E-value=3.6e-13 Score=106.83 Aligned_cols=109 Identities=11% Similarity=0.095 Sum_probs=76.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-C--CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCc-----------
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-L--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN----------- 94 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~--~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----------- 94 (248)
+.++.+|||+|||+|..+..++.. + ..+++|+|+|+.+ .. .++.++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~~----~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------PI----PNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------CC----TTCEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------CC----CCceEEEccccchhhhhhccccccc
Confidence 568889999999999999988876 3 3589999999942 01 13789999997754
Q ss_pred ------hhhhhc--ccCCceeEEEeccchhhhcCC-HH------HHHHHHHHHhccccCCcEEEEEecCh
Q 025754 95 ------FETQMQ--EKANQADLVCCFQHLQMCFET-EE------RARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 95 ------~~~~~~--~~~~~fD~V~~~~~l~~~~~~-~~------~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
....+. -.+++||+|++..++|+.-.. .+ ....+++++.++|+|||.|++.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 000000 035689999998876642111 11 12358899999999999999976554
No 182
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.42 E-value=5.9e-13 Score=102.70 Aligned_cols=110 Identities=18% Similarity=0.079 Sum_probs=80.2
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CC-CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc--ccCC
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ--EKAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~-~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~ 104 (248)
..++.+|||+|||+|..+..++.. +. .+++|+|+++ +++. .++.+.++|+.+.+....+. -.++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCC
Confidence 457889999999999999888776 33 6999999999 7643 13889999997754111110 0357
Q ss_pred ceeEEEeccchhhhcCC-HHH------HHHHHHHHhccccCCcEEEEEecChh
Q 025754 105 QADLVCCFQHLQMCFET-EER------ARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~-~~~------~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+||+|++...+++.-.. .+. ...+++++.++|+|||.+++..+...
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 89999998776642111 111 26899999999999999999866553
No 183
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.42 E-value=9.5e-13 Score=107.55 Aligned_cols=108 Identities=15% Similarity=0.123 Sum_probs=83.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC--CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc------
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE------ 101 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~--~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------ 101 (248)
.++.+|||||||+|..+..++... ..+++++|+++.+++.|++++...+...++.+.++|+.+. ......
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~~~~~~~~~~~~ 136 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET--LQVLIDSKSAPS 136 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--HHHHHHCSSCCG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH--HHHHHhhccccc
Confidence 367899999999999999888762 4699999999999999999887655444589999987431 111100
Q ss_pred -----c-C-CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 102 -----K-A-NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 102 -----~-~-~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
. + ++||+|++..... ....+++++.++|+|||++++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 2 6899999876433 35678999999999999999974
No 184
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.42 E-value=9.4e-14 Score=116.49 Aligned_cols=99 Identities=10% Similarity=-0.009 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEE-EEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEF-FEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
++.+|||+|||||.++..++..+.++|+|+|+|+.|++.+.+... ++.. ...|+...... .+ +..+||+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~------rv~~~~~~ni~~l~~~-~l--~~~~fD~v 155 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD------RVRSMEQYNFRYAEPV-DF--TEGLPSFA 155 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT------TEEEECSCCGGGCCGG-GC--TTCCCSEE
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc------ccceecccCceecchh-hC--CCCCCCEE
Confidence 678999999999999998888877799999999999987543211 1222 22333222211 11 23459999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|..+++. +..++.++.++|+|||.+++.
T Consensus 156 ~~d~sf~s-------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 156 SIDVSFIS-------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred EEEeeHhh-------HHHHHHHHHHHcCcCCEEEEE
Confidence 99887775 477999999999999999887
No 185
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.42 E-value=4.7e-13 Score=108.51 Aligned_cols=104 Identities=11% Similarity=0.087 Sum_probs=80.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CC------CeEEEEeCChHHHHHHHHHHHhcCC----CceEEEEEcCCCCCchhh
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LI------ANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFET 97 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~------~~v~giDis~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~ 97 (248)
..++.+|||+|||+|..+..++.. +. .+|+++|+++.+++.|+++....+. ..++.+.++|+... +.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~- 159 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG-YP- 159 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC-CG-
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC-CC-
Confidence 457899999999999998888764 32 4899999999999999987654220 12488999998552 21
Q ss_pred hhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
..++||+|++...++++ .+++.+.|+|||.+++.+..
T Consensus 160 ----~~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 ----PNAPYNAIHVGAAAPDT----------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ----GGCSEEEEEECSCBSSC----------CHHHHHTEEEEEEEEEEESC
T ss_pred ----cCCCccEEEECCchHHH----------HHHHHHHhcCCCEEEEEEec
Confidence 23689999999887762 26788999999999998654
No 186
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.41 E-value=8.8e-13 Score=111.81 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHh---cCCCceEEEEEcCCCCCchhhhhcc-cCC
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN---QRKNFIAEFFEADPCAENFETQMQE-KAN 104 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-~~~ 104 (248)
+++.+|||||||+|..+..++.. +..+++++|+|+.+++.|++.+.. .....++.++++|+.+.. .. .++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~~~~ 168 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFV-----RQTPDN 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH-----HSSCTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH-----HhccCC
Confidence 46789999999999999988876 356999999999999999987632 111235899999974321 11 257
Q ss_pred ceeEEEeccchhhhcCCHHHH--HHHHHHHhccccCCcEEEEEecC
Q 025754 105 QADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+||+|++....+. .....+ .++++++.++|+|||++++...+
T Consensus 169 ~fDvIi~d~~~~~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 169 TYDVVIIDTTDPA--GPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp CEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ceeEEEECCCCcc--ccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 8999999665443 112222 68999999999999999998655
No 187
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.41 E-value=4.1e-13 Score=104.20 Aligned_cols=108 Identities=12% Similarity=0.132 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++... +++|+|+|+.|++. . .++.++++|+.+ .+ .+++||+|
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~----~~~~~~~~d~~~-~~------~~~~fD~i 82 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------H----RGGNLVRADLLC-SI------NQESVDVV 82 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------C----SSSCEEECSTTT-TB------CGGGCSEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------c----cCCeEEECChhh-hc------ccCCCCEE
Confidence 467899999999999988887766 99999999999987 1 237899999876 22 24789999
Q ss_pred EeccchhhhcCC-----HHHHHHHHHHHhccccCCcEEEEEecCh---hHHHHHHH
Q 025754 110 CCFQHLQMCFET-----EERARRLLQNVSSLLKPGGYFLGITPDS---STIWAKYQ 157 (248)
Q Consensus 110 ~~~~~l~~~~~~-----~~~~~~~l~~~~~~LkpgG~~i~~~~~~---~~~~~~~~ 157 (248)
++...++..-.. ......++.++.+.| |||.+++..+.. ..+.+.+.
T Consensus 83 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~ 137 (170)
T 3q87_B 83 VFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLE 137 (170)
T ss_dssp EECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHH
T ss_pred EECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHH
Confidence 998776642111 112345677777777 999999986543 44444443
No 188
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.40 E-value=1.6e-12 Score=114.14 Aligned_cols=125 Identities=17% Similarity=0.097 Sum_probs=92.3
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
.++..+..++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|++....++...++.++++|+.+. ...+...
T Consensus 209 ~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~--~~~~~~~ 286 (396)
T 2as0_A 209 LALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEE--MEKLQKK 286 (396)
T ss_dssp HHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--HHHHHHT
T ss_pred HHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHH--HHHHHhh
Confidence 34445555789999999999999999988766799999999999999999887665433689999997442 1111112
Q ss_pred CCceeEEEeccchh-----hhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 103 ANQADLVCCFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 103 ~~~fD~V~~~~~l~-----~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..+||+|++..... ..+........++.++.++|+|||.+++...+.
T Consensus 287 ~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 56899999853211 111123567889999999999999998886654
No 189
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.40 E-value=9.6e-12 Score=107.55 Aligned_cols=103 Identities=23% Similarity=0.279 Sum_probs=85.1
Q ss_pred CCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
+..+|+|||||+|..+..++... ..+++..|. |.+++.|++...... ..+++++.+|+...+. ..+|+|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~--------~~~D~~ 248 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL--------PEADLY 248 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC--------CCCSEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC--------CCceEE
Confidence 56799999999999999998873 347888887 889999988765332 3469999999876433 357999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++..++|+ .+.++...+++++++.|+|||.+++.
T Consensus 249 ~~~~vlh~--~~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 249 ILARVLHD--WADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EEESSGGG--SCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred Eeeeeccc--CCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 99999998 67888899999999999999999887
No 190
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.40 E-value=1.2e-12 Score=107.69 Aligned_cols=106 Identities=10% Similarity=0.035 Sum_probs=82.3
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc---cCCc
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE---KANQ 105 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~ 105 (248)
++.+|||||||+|..+..++.. + ..+++++|+++.+++.|++.+...+...++.++++|+.+. .+.+.. ..++
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~--l~~l~~~~~~~~~ 156 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV--LDEMIKDEKNHGS 156 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH--HHHHHHSGGGTTC
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH--HHHHHhccCCCCC
Confidence 5689999999999999888776 2 4699999999999999999887765545689999997431 111100 1478
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
||+|++.... .....+++++.++|+|||++++.
T Consensus 157 fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 157 YDFIFVDADK-------DNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp BSEEEECSCS-------TTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEEEcCch-------HHHHHHHHHHHHhCCCCeEEEEe
Confidence 9999886532 23567899999999999999986
No 191
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.40 E-value=1.7e-12 Score=108.88 Aligned_cols=112 Identities=15% Similarity=0.050 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeC-ChHHHHHHHHHH-----HhcCCC----ceEEEEEcCCCCCc--hhh
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDV-ATSGIGEARDTW-----ENQRKN----FIAEFFEADPCAEN--FET 97 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDi-s~~~l~~a~~~~-----~~~~~~----~~~~~~~~d~~~~~--~~~ 97 (248)
.++.+|||||||+|..+..++..+..+|+|+|+ |+.+++.|++.. ...+.. .++.+...|..+.. +..
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 467899999999999988887776669999999 899999999887 322211 24677766654421 111
Q ss_pred hhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhcccc---C--CcEEEEEec
Q 025754 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLK---P--GGYFLGITP 147 (248)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lk---p--gG~~i~~~~ 147 (248)
.+ ..++||+|++..++++ .+....+++.+.++|+ | ||.+++.+.
T Consensus 158 ~~--~~~~fD~Ii~~dvl~~----~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 158 CT--GLQRFQVVLLADLLSF----HQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp HH--SCSSBSEEEEESCCSC----GGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred hc--cCCCCCEEEEeCcccC----hHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 01 2578999999776665 4457889999999999 9 998777643
No 192
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.40 E-value=4.1e-12 Score=100.80 Aligned_cols=101 Identities=12% Similarity=0.007 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++.. ++.++++|+.+ + +++||+|
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~--~-------~~~~D~v 114 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSE--I-------SGKYDTW 114 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGG--C-------CCCEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHH--C-------CCCeeEE
Confidence 4778999999999999988887766689999999999999998765 27899999854 2 3689999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
++...+|+. .......+++++.+.+ |+++++..+..
T Consensus 115 ~~~~p~~~~--~~~~~~~~l~~~~~~~--g~~~~~~~~~~ 150 (200)
T 1ne2_A 115 IMNPPFGSV--VKHSDRAFIDKAFETS--MWIYSIGNAKA 150 (200)
T ss_dssp EECCCC---------CHHHHHHHHHHE--EEEEEEEEGGG
T ss_pred EECCCchhc--cCchhHHHHHHHHHhc--CcEEEEEcCch
Confidence 999887762 2233356788888888 55555444433
No 193
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.39 E-value=3.8e-12 Score=105.53 Aligned_cols=112 Identities=11% Similarity=0.095 Sum_probs=81.5
Q ss_pred CCeEEEEcCCC--CccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCCc
Q 025754 32 YVTVCDLYCGA--GVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQ 105 (248)
Q Consensus 32 ~~~VLDlGcG~--G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~ 105 (248)
...|||||||+ +..+..++.. +..+|+++|.|+.||+.|++++.... ..++.|+++|+.+... .+.. ....
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~--~l~~~~~~~~ 155 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPAS--ILDAPELRDT 155 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHH--HHTCHHHHTT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhh--hhcccccccc
Confidence 36899999997 5566665543 45699999999999999999886532 2358999999977421 0100 0233
Q ss_pred ee-----EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 106 AD-----LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 106 fD-----~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|| .|++..++|++ ...++...++.++.+.|+|||+|+++..
T Consensus 156 ~D~~~p~av~~~avLH~l-~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 156 LDLTRPVALTVIAIVHFV-LDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp CCTTSCCEEEEESCGGGS-CGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred cCcCCcchHHhhhhHhcC-CchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 44 57788999983 2223367899999999999999999843
No 194
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.39 E-value=2.3e-12 Score=104.98 Aligned_cols=106 Identities=15% Similarity=0.072 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCCCccHhHHHHcC--CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccC--Cce
Q 025754 31 PYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA--NQA 106 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~f 106 (248)
++.+|||+|||+|..+..++... ..+++++|+++.+++.|++.+...+...++.++++|+.+ ....+...+ ++|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~--~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA--TLEQLTQGKPLPEF 149 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH--HHHHHHTSSSCCCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHHHHhcCCCCCc
Confidence 57899999999999988887752 359999999999999999988765544468999998633 111111112 789
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|++.... .....+++++.++|+|||++++.
T Consensus 150 D~V~~d~~~-------~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 150 DLIFIDADK-------RNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEEEECSCG-------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEe
Confidence 999876542 23567899999999999999987
No 195
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.39 E-value=2e-12 Score=102.30 Aligned_cols=109 Identities=14% Similarity=0.097 Sum_probs=77.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--c---C
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--K---A 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~---~ 103 (248)
..++.+|||+|||+|.++..++.. ..+|+|+|+++... ...+.++++|+.+......+.. . .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~~------------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEMEE------------IAGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCCC------------CTTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccccc------------CCCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 568999999999999999988877 45999999998521 1138899999987653222111 1 1
Q ss_pred CceeEEEeccchhhh-------cCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 104 NQADLVCCFQHLQMC-------FETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~-------~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
++||+|+|....... ....+....+++.+.++|||||.|++.+..+.
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 489999996533210 01122346788999999999999998866553
No 196
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.38 E-value=1.4e-12 Score=108.91 Aligned_cols=108 Identities=13% Similarity=0.054 Sum_probs=85.8
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|++.....+...++.+.++|+.+. + .+++|
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 182 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-F------DEKDV 182 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-C------SCCSE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-c------cCCcc
Confidence 457889999999999999888876 3 4699999999999999999877654334588999998553 2 35689
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHH
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~ 152 (248)
|+|++... ....+++++.++|+|||.+++..+....+
T Consensus 183 D~V~~~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 219 (277)
T 1o54_A 183 DALFLDVP---------DPWNYIDKCWEALKGGGRFATVCPTTNQV 219 (277)
T ss_dssp EEEEECCS---------CGGGTHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred CEEEECCc---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 99987431 13467899999999999999998876443
No 197
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.38 E-value=3e-12 Score=104.68 Aligned_cols=107 Identities=10% Similarity=-0.016 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc---cCC
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE---KAN 104 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~ 104 (248)
.++.+|||||||+|..+..++.. + ..+++++|+++.+++.|++.+...+...++.++++|+.+ ..+.+.. ..+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~--~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML--ALDNLLQGQESEG 146 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH--HHHHHHHSTTCTT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHHHHhccCCCC
Confidence 36789999999999999888776 2 469999999999999999988776654569999999743 1111110 146
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+||+|++.... .....+++.+.++|+|||++++.
T Consensus 147 ~fD~I~~d~~~-------~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 147 SYDFGFVDADK-------PNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp CEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCEEEECCch-------HHHHHHHHHHHHhcCCCeEEEEe
Confidence 89999876532 23577899999999999999987
No 198
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.37 E-value=9.9e-13 Score=120.59 Aligned_cols=110 Identities=17% Similarity=0.121 Sum_probs=80.4
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
.+..+.+|||||||+|.++..+++.+. +|+|+|+|+.+|+.|+.+....+ ..++.|.++++.+ +.... .+++||
T Consensus 63 ~~~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~-~~~~~~~~~~~~~--~~~~~--~~~~fD 136 (569)
T 4azs_A 63 ALGRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENP-DFAAEFRVGRIEE--VIAAL--EEGEFD 136 (569)
T ss_dssp HHTSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTST-TSEEEEEECCHHH--HHHHC--CTTSCS
T ss_pred hcCCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcC-CCceEEEECCHHH--Hhhhc--cCCCcc
Confidence 345678999999999999999988877 89999999999999999887654 2368999998743 21111 357899
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|..+++|+.. +.....+..+.+.|+++|..++.
T Consensus 137 ~v~~~e~~ehv~~--~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 137 LAIGLSVFHHIVH--LHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp EEEEESCHHHHHH--HHCHHHHHHHHHHHHHHSSEEEE
T ss_pred EEEECcchhcCCC--HHHHHHHHHHHHHhccccceeeE
Confidence 9999999998422 22222334466667776654444
No 199
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.37 E-value=3.5e-12 Score=111.14 Aligned_cols=127 Identities=14% Similarity=0.082 Sum_probs=92.5
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
.++.....++.+|||+|||+|..+..++.... .+++|+|+|+.|++.|+++....+...++.+.++|+.+.+.
T Consensus 209 ~l~~~~~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~------ 282 (373)
T 3tm4_A 209 AMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ------ 282 (373)
T ss_dssp HHHHHHTCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG------
T ss_pred HHHHhhcCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc------
Confidence 34443356788999999999999988877643 48999999999999999998776644468999999876544
Q ss_pred cCCceeEEEeccchhhhc---CCHHH-HHHHHHHHhccccCCcEEEEEecChhHHHHHHH
Q 025754 102 KANQADLVCCFQHLQMCF---ETEER-ARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQ 157 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~---~~~~~-~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~ 157 (248)
.+++||+|++....+.-. ..... ...+++.+.++| ||.+++.+++...+.+.+.
T Consensus 283 ~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~~~~~ 340 (373)
T 3tm4_A 283 YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAIEEAIA 340 (373)
T ss_dssp TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHHHHHH
T ss_pred ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHH
Confidence 357899999965433211 11222 377888999988 6666666777766665554
No 200
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.37 E-value=9.9e-12 Score=98.97 Aligned_cols=105 Identities=14% Similarity=0.080 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+. ++.++++|+.+ + +++||+|
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~--~-------~~~~D~v 116 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSE--F-------NSRVDIV 116 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGG--C-------CCCCSEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHH--c-------CCCCCEE
Confidence 46889999999999999988887666899999999999999998766543 58999999854 2 3589999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
++....|. ........+++.+.+.+ ||.++..+++.
T Consensus 117 ~~~~p~~~--~~~~~~~~~l~~~~~~l--~~~~~~~~~~~ 152 (207)
T 1wy7_A 117 IMNPPFGS--QRKHADRPFLLKAFEIS--DVVYSIHLAKP 152 (207)
T ss_dssp EECCCCSS--SSTTTTHHHHHHHHHHC--SEEEEEEECCH
T ss_pred EEcCCCcc--ccCCchHHHHHHHHHhc--CcEEEEEeCCc
Confidence 99876654 22223456788888887 66555554443
No 201
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.37 E-value=9.5e-13 Score=107.62 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-----CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-----LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-----~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
++.+|||||||+|..+..++.. +.++|+|+|+|+.|++.|+.. ..++.++++|+.+....... ...+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~------~~~v~~~~gD~~~~~~l~~~--~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD------MENITLHQGDCSDLTTFEHL--REMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG------CTTEEEEECCSSCSGGGGGG--SSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc------CCceEEEECcchhHHHHHhh--ccCC
Confidence 5679999999999999888775 346999999999999888621 12489999999764211111 2347
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhc-cccCCcEEEEEe
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSS-LLKPGGYFLGIT 146 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~-~LkpgG~~i~~~ 146 (248)
||+|++... |. ....++.++.+ +|+|||++++..
T Consensus 153 fD~I~~d~~-~~------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 153 HPLIFIDNA-HA------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSEEEEESS-CS------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCEEEECCc-hH------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 999987664 31 35678999997 999999999863
No 202
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.36 E-value=3.2e-12 Score=103.42 Aligned_cols=107 Identities=13% Similarity=0.106 Sum_probs=82.1
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccC--Cc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA--NQ 105 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~ 105 (248)
.++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|++.+...+...++.++++|+.+. ...+.... ++
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~--~~~~~~~~~~~~ 145 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET--LDELLAAGEAGT 145 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH--HHHHHHTTCTTC
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH--HHHHHhcCCCCC
Confidence 46789999999999999888775 2 4699999999999999999887665444689999987431 11111111 68
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
||+|++.... .....+++++.++|+|||++++.
T Consensus 146 ~D~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 146 FDVAVVDADK-------ENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEEEECSCS-------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999886532 23567899999999999999986
No 203
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.36 E-value=5e-12 Score=110.69 Aligned_cols=120 Identities=11% Similarity=0.033 Sum_probs=86.6
Q ss_pred HHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 22 ~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
+.++..++.++.+|||+|||+|.++..++..+. .|+|+|+|+.+++.|++....++.. ..+.++|+.+. +..
T Consensus 205 r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~-----l~~ 276 (393)
T 4dmg_A 205 RRLFEAMVRPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPT-----LRG 276 (393)
T ss_dssp HHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHH-----HHT
T ss_pred HHHHHHHhcCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHH-----HHH
Confidence 344556667799999999999999999988776 5999999999999999988766533 34668887431 111
Q ss_pred cCCceeEEEeccch-----hhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 102 KANQADLVCCFQHL-----QMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 102 ~~~~fD~V~~~~~l-----~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..+.||+|++.... ............++..+.++|+|||.+++...+.
T Consensus 277 ~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 277 LEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 13449999985421 0111123456789999999999999999664443
No 204
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=3.1e-12 Score=106.76 Aligned_cols=105 Identities=14% Similarity=-0.006 Sum_probs=84.0
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
.+.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|++....++. .++.++++|+.+. . ..++|
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l-~~~~~~~~d~~~~-~------~~~~~ 187 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL-NNVIPILADNRDV-E------LKDVA 187 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC-SSEEEEESCGGGC-C------CTTCE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEECChHHc-C------ccCCc
Confidence 3568899999999999999998876 355999999999999999998876543 2478999998653 1 14689
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|+|++.... ....++..+.+.|+|||++++.+..
T Consensus 188 D~Vi~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 188 DRVIMGYVH--------KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp EEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECCcc--------cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 999887642 3456888899999999999988443
No 205
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.36 E-value=3e-12 Score=109.01 Aligned_cols=112 Identities=18% Similarity=0.093 Sum_probs=82.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||+|||+|..+..++.. +.++|+|+|+|+.+++.++++....+.. ++.++++|+..... ..++|
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~------~~~~f 188 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGE------LNVEF 188 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGG------GCCCE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccc------ccccC
Confidence 347889999999999999888765 3358999999999999999988765432 48899999855332 25689
Q ss_pred eEEEeccc------hhhhc-----CCH-------HHHHHHHHHHhccccCCcEEEEEec
Q 025754 107 DLVCCFQH------LQMCF-----ETE-------ERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 107 D~V~~~~~------l~~~~-----~~~-------~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|+|++... ++..- .+. .....+++++.++|||||.+++++.
T Consensus 189 D~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 189 DKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp EEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 99998421 21100 011 1236899999999999999998743
No 206
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.35 E-value=3.8e-12 Score=106.71 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=81.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhc--C--------CCceEEEEEcCCCCCchhhh
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--R--------KNFIAEFFEADPCAENFETQ 98 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~--~--------~~~~~~~~~~d~~~~~~~~~ 98 (248)
.+++.+|||||||+|..+..++..+..+++++|+++.+++.|++.+ .. + ...++.++++|+.+ .
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~-----~ 146 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE-----F 146 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH-----H
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH-----H
Confidence 3467899999999999998888776569999999999999999877 22 1 12358999998632 1
Q ss_pred hcccCCceeEEEeccchhhhcCCHHH--HHHHHHHHhccccCCcEEEEEec
Q 025754 99 MQEKANQADLVCCFQHLQMCFETEER--ARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~--~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
+.. +++||+|++....+. ..... ..++++++.++|+|||++++...
T Consensus 147 l~~-~~~fD~Ii~d~~~~~--~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 147 IKN-NRGFDVIIADSTDPV--GPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HHH-CCCEEEEEEECCCCC-------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcc-cCCeeEEEECCCCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 222 578999998654332 11222 27889999999999999998743
No 207
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.35 E-value=1.2e-12 Score=109.26 Aligned_cols=115 Identities=11% Similarity=0.024 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
.++.+|||+|||+|..+..++.. +..+|+|+|+++.+++.++++....+.. ++.++++|+..... ......++||
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~--~~~~~~~~fD 158 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKD--YLLKNEIFFD 158 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHH--HHHHTTCCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcch--hhhhccccCC
Confidence 47889999999999999888774 4369999999999999999988765532 58899999744221 1100256899
Q ss_pred EEEeccchhh--hcC-----CH-------HHHHHHHHHHhccccCCcEEEEEec
Q 025754 108 LVCCFQHLQM--CFE-----TE-------ERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 108 ~V~~~~~l~~--~~~-----~~-------~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
+|++...... ++. +. .....+++++.++|||||.+++++.
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 9998632110 000 01 2346889999999999999998754
No 208
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.35 E-value=7.2e-12 Score=109.97 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=88.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCC-CceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK-NFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|++....++. ..++.++++|+.+. ...+.....+||+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~--~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKL--LRTYRDRGEKFDV 296 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHH--HHHHHHTTCCEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH--HHHHHhcCCCCCE
Confidence 57889999999999999999887767999999999999999998876554 33689999998442 1111112468999
Q ss_pred EEeccchh-----hhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 109 VCCFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 109 V~~~~~l~-----~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
|++..... ...........++.++.+.|+|||++++.+...
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99863211 111223557789999999999999999885544
No 209
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.35 E-value=3.8e-12 Score=110.69 Aligned_cols=97 Identities=19% Similarity=0.117 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.+..+|||||||+|..+..++.. +..+++++|+ +.+++.|++. .++.++++|+.+ ++ +. . |+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~------p~-~-D~ 264 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GV------PK-G-DA 264 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC------CC-C-SE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CC------CC-C-CE
Confidence 35689999999999999998876 3448999999 8888776532 248999999875 33 23 3 99
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|++..++|+ .+.++...++++++++|+|||.+++.
T Consensus 265 v~~~~vlh~--~~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 265 IFIKWICHD--WSDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp EEEESCGGG--BCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEechhhc--CCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999997 56778889999999999999999887
No 210
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.34 E-value=4.7e-12 Score=109.93 Aligned_cols=97 Identities=18% Similarity=0.125 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.+..+|||||||+|..+..++.. +..+++++|+ +.+++.|++. .++.++.+|+.+ ++ +.+ |+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~------p~~--D~ 262 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EV------PSG--DT 262 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC------CCC--SE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CC------CCC--CE
Confidence 46789999999999999988876 3448999999 8888776532 249999999876 43 233 99
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|++..++|+ .+.++...++++++++|+|||.+++.
T Consensus 263 v~~~~vlh~--~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 263 ILMKWILHD--WSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEehHHhcc--CCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999997 56788899999999999999999887
No 211
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.34 E-value=4.2e-12 Score=107.59 Aligned_cols=113 Identities=11% Similarity=-0.005 Sum_probs=80.4
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHh--cCC-CceEEEEEcCCCCCchhhhhcccCCc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN--QRK-NFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
+++.+|||||||+|..+..++.. +..+++++|+++.+++.|++.+.. .+. ..+++++++|+.+ .++..+++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~-----~l~~~~~~ 168 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE-----FMKQNQDA 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH-----HHHTCSSC
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH-----HHhhCCCC
Confidence 46789999999999999988876 346999999999999999987653 111 2358899998733 11123578
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
||+|++....+..........++++++.++|+|||++++...
T Consensus 169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 169 FDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 999998654332100011236789999999999999998853
No 212
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.34 E-value=4.5e-12 Score=99.96 Aligned_cols=110 Identities=20% Similarity=0.109 Sum_probs=76.7
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CC---------CeEEEEeCChHHHHHHHHHHHhcCCCceEEEE-EcCCCCCchhh
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LI---------ANYIGIDVATSGIGEARDTWENQRKNFIAEFF-EADPCAENFET 97 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~---------~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~-~~d~~~~~~~~ 97 (248)
+.++.+|||+|||+|..+..++.. +. .+++|+|+|+.+. . .++.++ ++|+.......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~---------~---~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP---------L---EGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC---------C---TTCEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc---------C---CCCeEEEeccCCCHHHHH
Confidence 568899999999999999988876 43 6899999998420 0 127788 88886643211
Q ss_pred hhc--ccCCceeEEEeccchhhhcCCHHH-------HHHHHHHHhccccCCcEEEEEecChh
Q 025754 98 QMQ--EKANQADLVCCFQHLQMCFETEER-------ARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 98 ~~~--~~~~~fD~V~~~~~l~~~~~~~~~-------~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
.+. -.+++||+|+|..+++.......+ ...+++++.++|+|||.+++......
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 110 023589999997655432111111 25889999999999999999866553
No 213
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.34 E-value=4e-12 Score=110.59 Aligned_cols=104 Identities=19% Similarity=0.225 Sum_probs=83.4
Q ss_pred HHHHHh--cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhh
Q 025754 23 ALIKIY--SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (248)
Q Consensus 23 ~li~~~--~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (248)
.++..+ ..++.+|||||||+|..+..++... ..+++++|+ +.+++.|++. .++.++++|+.+ ++
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~---- 265 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SV---- 265 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC----
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CC----
Confidence 344444 3467899999999999999888763 348899999 9999877642 138999999866 33
Q ss_pred cccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+. ||+|++..++|+ .+.+....++++++++|+|||.+++.
T Consensus 266 ---~~-~D~v~~~~~lh~--~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 266 ---PQ-GDAMILKAVCHN--WSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp ---CC-EEEEEEESSGGG--SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CC-CCEEEEeccccc--CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 23 999999999998 46666779999999999999999987
No 214
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.33 E-value=2.8e-12 Score=107.19 Aligned_cols=114 Identities=12% Similarity=0.065 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhc--CC-CceEEEEEcCCCCCchhhhhcccCCc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
+++.+|||||||+|..+..++.. +..+++++|+++.+++.|++.+... +. ..+++++++|+.. + +....++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~---l~~~~~~ 148 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM--H---IAKSENQ 148 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH--H---HHTCCSC
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH--H---HhhCCCC
Confidence 45789999999999999888876 4579999999999999999876431 11 2358999999743 1 2223578
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
||+|++....+......-...++++.+.++|+|||++++...+
T Consensus 149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9999986543321000001257899999999999999998544
No 215
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.33 E-value=5e-12 Score=107.94 Aligned_cols=113 Identities=16% Similarity=0.171 Sum_probs=83.1
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhc--CC-CceEEEEEcCCCCCchhhhhcccCC
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
.+++.+|||||||+|..+..++.. +..+++++|+|+.+++.|++.+... +. ..+++++++|+.+ + ++..++
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~--~---l~~~~~ 188 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK--F---LENVTN 188 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH--H---HHHCCS
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH--H---HhhcCC
Confidence 346689999999999999888876 4569999999999999999886541 11 2358999999743 1 111357
Q ss_pred ceeEEEeccchhhhcCCHHHH--HHHHHHHhccccCCcEEEEEecC
Q 025754 105 QADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+||+|++...-+. ...... .++++++.++|+|||++++...+
T Consensus 189 ~fDvIi~d~~~p~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 189 TYDVIIVDSSDPI--GPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp CEEEEEEECCCSS--SGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEEEECCcCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 8999998653221 111112 68999999999999999998654
No 216
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.33 E-value=7.4e-12 Score=105.71 Aligned_cols=113 Identities=18% Similarity=0.070 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHh--cCC-CceEEEEEcCCCCCchhhhhcccCCc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN--QRK-NFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
+++.+|||||||+|..+..++.. +..+++++|+|+.+++.|++.+.. .+. ..++.++++|+.. + +....++
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~--~---l~~~~~~ 163 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE--Y---VRKFKNE 163 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH--H---GGGCSSC
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH--H---HhhCCCC
Confidence 45689999999999999888876 456999999999999999987643 111 2358999999733 1 1113578
Q ss_pred eeEEEeccchhhhcCCHH--HHHHHHHHHhccccCCcEEEEEecC
Q 025754 106 ADLVCCFQHLQMCFETEE--RARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~--~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
||+|++...-++ ..... ...++++++.++|+|||++++...+
T Consensus 164 fD~Ii~d~~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 164 FDVIIIDSTDPT-AGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ceEEEEcCCCcc-cCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 999998543221 01111 1268899999999999999998554
No 217
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.33 E-value=3.5e-13 Score=112.03 Aligned_cols=108 Identities=14% Similarity=0.067 Sum_probs=74.7
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHH-HhcCCCceEEEE--EcCCCCCchhhhhcccCC
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTW-ENQRKNFIAEFF--EADPCAENFETQMQEKAN 104 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 104 (248)
.+.++.+|||||||+|.++..++.. ++|+|+|+++ |+..+++.. .......++.++ ++|+.. + +++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--l------~~~ 139 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT--L------PVE 139 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT--S------CCC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH--C------CCC
Confidence 4568899999999999999888776 6899999999 543322110 000111147888 889865 2 257
Q ss_pred ceeEEEeccchhhhcCCH--HHH--HHHHHHHhccccCCc--EEEEEecC
Q 025754 105 QADLVCCFQHLQMCFETE--ERA--RRLLQNVSSLLKPGG--YFLGITPD 148 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~--~~~--~~~l~~~~~~LkpgG--~~i~~~~~ 148 (248)
+||+|+|.++ ++. ... +.. ..++..+.++|+||| .|++.+..
T Consensus 140 ~fD~V~sd~~-~~~-~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 140 RTDVIMCDVG-ESS-PKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCSEEEECCC-CCC-SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcEEEEeCc-ccC-CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 8999999876 431 121 111 138899999999999 99987643
No 218
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.32 E-value=4.4e-12 Score=105.81 Aligned_cols=106 Identities=14% Similarity=0.029 Sum_probs=85.6
Q ss_pred HHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCC
Q 025754 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
+...+.+|.+|||+|||+|.++..++..+.++|+++|+|+.+++.+++....++...++.++++|+.+.. ..+
T Consensus 119 i~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-------~~~ 191 (278)
T 3k6r_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-------GEN 191 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-------CCS
T ss_pred HHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-------ccc
Confidence 4456778999999999999999988888777999999999999999998887776667999999986643 357
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.||.|++..- +. ...++..+.++|++||++.+.
T Consensus 192 ~~D~Vi~~~p-~~-------~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 192 IADRILMGYV-VR-------THEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp CEEEEEECCC-SS-------GGGGHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEECCC-Cc-------HHHHHHHHHHHcCCCCEEEEE
Confidence 8999987542 11 234666777899999998654
No 219
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.32 E-value=4.2e-12 Score=108.09 Aligned_cols=113 Identities=14% Similarity=0.072 Sum_probs=83.1
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhc--C-C-CceEEEEEcCCCCCchhhhhcccC
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--R-K-NFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~--~-~-~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
.+++.+|||||||+|..+..++.. +..+++++|+++.+++.|++.+... + . ..++.++++|+.+ + ++..+
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~--~---l~~~~ 149 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA--Y---LERTE 149 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH--H---HHHCC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH--H---HHhcC
Confidence 346689999999999999888776 4569999999999999999876531 1 0 2358999999743 1 11136
Q ss_pred CceeEEEeccchhhhc-CCHHH--HHHHHHHHhccccCCcEEEEEe
Q 025754 104 NQADLVCCFQHLQMCF-ETEER--ARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~-~~~~~--~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
++||+|++....+... ..... ..++++++.++|+|||++++..
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 7899999876544200 00111 3689999999999999999874
No 220
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.32 E-value=5.8e-12 Score=107.13 Aligned_cols=111 Identities=12% Similarity=0.035 Sum_probs=79.2
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhc--CC-CceEEEEEcCCCCCchhhhhcccCC
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
.+++.+|||||||+|..+..++.. +..+++++|+++.+++.|++.+... +. ..++.++++|+.+ .+...++
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~-----~l~~~~~ 180 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE-----FLKNHKN 180 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH-----HHHHCTT
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH-----HHHhcCC
Confidence 346689999999999999888776 3569999999999999999887532 11 2358899998733 1111357
Q ss_pred ceeEEEeccchhhhcCCHHHH--HHHHHHHhccccCCcEEEEEe
Q 025754 105 QADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~LkpgG~~i~~~ 146 (248)
+||+|++...-+. .....+ .++++++.++|+|||++++..
T Consensus 181 ~fD~Ii~d~~~~~--~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 181 EFDVIITDSSDPV--GPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CEEEEEECCC---------------HHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEEcCCCCC--CcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8999998664332 112222 789999999999999999975
No 221
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.32 E-value=2.6e-12 Score=104.71 Aligned_cols=100 Identities=11% Similarity=0.025 Sum_probs=66.5
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEE-EcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFF-EADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
++.+|||||||+|.++..++..+..+|+|+|+|+.|++.|+++... +... ..++...... .+ ....+|.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~------~~~~~~~~~~~~~~~-~~--~~~~~d~~ 107 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER------VVVMEQFNFRNAVLA-DF--EQGRPSFT 107 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT------EEEECSCCGGGCCGG-GC--CSCCCSEE
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc------ccccccceEEEeCHh-Hc--CcCCCCEE
Confidence 5679999999999999999888766999999999999987764322 1111 1111110000 00 11124555
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
++..++.. +..++.++.++|||||.+++.+
T Consensus 108 ~~D~v~~~-------l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 108 SIDVSFIS-------LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp EECCSSSC-------GGGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEEEhhh-------HHHHHHHHHHhccCCCEEEEEE
Confidence 44443332 2678999999999999999874
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.31 E-value=5.9e-12 Score=105.63 Aligned_cols=112 Identities=15% Similarity=0.178 Sum_probs=83.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcC---CCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQR---KNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
+++.+|||||||+|..+..++... ..+++++|+++.+++.|++.+...+ ...++.++++|+.+ + +...+++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~--~---l~~~~~~ 151 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK--F---LENVTNT 151 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH--H---HHHCCSC
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH--H---HHhCCCC
Confidence 467899999999999998887763 5699999999999999998865321 02358899999743 1 1113578
Q ss_pred eeEEEeccchhhhcCCHHHH--HHHHHHHhccccCCcEEEEEecC
Q 025754 106 ADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~--~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
||+|++....+. .....+ .++++++.++|+|||++++...+
T Consensus 152 fD~Ii~d~~~~~--~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 152 YDVIIVDSSDPI--GPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEEEEEECCCTT--TGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ceEEEEcCCCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 999998553332 112222 68999999999999999998543
No 223
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.31 E-value=2.8e-12 Score=105.61 Aligned_cols=114 Identities=10% Similarity=0.040 Sum_probs=75.7
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc-CCceeE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-ANQADL 108 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~fD~ 108 (248)
++.+|||+|||+|..+..++.. +..+++|+|+|+.|++.|+++....+...++.++++|+.+.-+. .+... +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMD-ALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTT-TSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhh-hhhcccCCcccE
Confidence 5779999999999988887765 23599999999999999999887665444589999997552110 01101 258999
Q ss_pred EEeccchhhhcCC-----------HHHHHHHHHHHhccccCCcEEEEE
Q 025754 109 VCCFQHLQMCFET-----------EERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~-----------~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|....+..-.. .+....++..+.++|||||.+.+.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9997544431100 012235678899999999987653
No 224
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.31 E-value=8.7e-12 Score=116.73 Aligned_cols=113 Identities=15% Similarity=0.141 Sum_probs=88.8
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCC-ceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++....++.. .++.++++|+.+ + +....++||+|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~--~---l~~~~~~fD~I 613 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA--W---LREANEQFDLI 613 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHH--H---HHHCCCCEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHH--H---HHhcCCCccEE
Confidence 68899999999999999888877778999999999999999988776643 358999999844 1 11135789999
Q ss_pred Eeccchh-------hhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 110 CCFQHLQ-------MCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 110 ~~~~~l~-------~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
++..-.. ..+........++..+.++|+|||++++.+..
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9854211 11233567788999999999999999988655
No 225
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.31 E-value=3.8e-13 Score=112.42 Aligned_cols=109 Identities=19% Similarity=0.048 Sum_probs=74.4
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHH-HhcCCCceEEEE--EcCCCCCchhhhhcccCC
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTW-ENQRKNFIAEFF--EADPCAENFETQMQEKAN 104 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 104 (248)
.+.++.+|||||||+|.++..++.. ++|+|+|+++ |+..++++. .......++.++ ++|+.. + +++
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--l------~~~ 147 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK--M------EPF 147 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG--C------CCC
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh--C------CCC
Confidence 3457899999999999999888776 5899999999 644332211 000111247888 888754 2 357
Q ss_pred ceeEEEeccchhhhcCC-HHHH--HHHHHHHhccccCCc--EEEEEecC
Q 025754 105 QADLVCCFQHLQMCFET-EERA--RRLLQNVSSLLKPGG--YFLGITPD 148 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~-~~~~--~~~l~~~~~~LkpgG--~~i~~~~~ 148 (248)
+||+|+|.++ ++.... .+.. ..++..+.++|+||| .|++.+..
T Consensus 148 ~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 148 QADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 8999999876 431111 1111 137899999999999 99887543
No 226
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.31 E-value=1.6e-11 Score=103.01 Aligned_cols=110 Identities=14% Similarity=0.091 Sum_probs=79.3
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
.+++.. ..++.+|||||||+|..+..++..+. +|+|+|+|+.|++.++++....+...++.++++|+.+.++
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~------ 91 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL------ 91 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC------
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc------
Confidence 344443 45788999999999999999988765 9999999999999999887644322358999999976544
Q ss_pred cCCceeEEEeccchhhhcCCHHHHHHHHH--------------HH--hccccCCcEEEE
Q 025754 102 KANQADLVCCFQHLQMCFETEERARRLLQ--------------NV--SSLLKPGGYFLG 144 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~--------------~~--~~~LkpgG~~i~ 144 (248)
.+||+|++....+. ..+....+++ ++ +.+++|||.++.
T Consensus 92 --~~fD~vv~nlpy~~---~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 92 --PFFDTCVANLPYQI---SSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp --CCCSEEEEECCGGG---HHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred --hhhcEEEEecCccc---chHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 37999999766554 1222223332 22 358899998753
No 227
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.30 E-value=2.6e-11 Score=105.59 Aligned_cols=106 Identities=9% Similarity=-0.138 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC-CchhhhhcccCCceeE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQADL 108 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~fD~ 108 (248)
++.+|||+| |+|..+..++..+. .+++|+|+|+.|++.|+++....+.. ++.++++|+.+ .+.. .+++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCccE
Confidence 578999999 99999988877654 69999999999999999988766543 69999999876 2210 2458999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCc-EEEEEecC
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGG-YFLGITPD 148 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG-~~i~~~~~ 148 (248)
|++...++. . ....+++++.++|+||| .+++.+..
T Consensus 245 Vi~~~p~~~----~-~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 245 FITDPPETL----E-AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEECCCSSH----H-HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEECCCCch----H-HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 999765443 1 25889999999999999 44555443
No 228
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.30 E-value=5.4e-12 Score=103.18 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=84.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.+..+|||||||+|-++..|+.. +..+|+++|+++.|++.++......+. ...+.+.|.....+ ++++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p-------~~~~Dv 201 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRL-------DEPADV 201 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCC-------CSCCSE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCC-------CCCcch
Confidence 55779999999999999988777 567999999999999999998877653 37788999866554 688999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|++.-++|+ ...+.....+ ++...|+|+|+++-.
T Consensus 202 aL~lkti~~--Le~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 202 TLLLKTLPC--LETQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp EEETTCHHH--HHHHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred HHHHHHHHH--hhhhhhHHHH-HHHHHhCCCCEEEec
Confidence 999999997 2222233445 899999999998754
No 229
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.30 E-value=3.1e-12 Score=108.42 Aligned_cols=108 Identities=17% Similarity=0.069 Sum_probs=74.2
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeC----ChHHHHHHHHHHHhcCCCceEEEEEc-CCCCCchhhhhccc
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDV----ATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEK 102 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDi----s~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~ 102 (248)
.+.++.+|||||||+|.++..++.. ++|+|+|+ ++.+++.+. ....+ ...+.++++ |+...+
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~-------- 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP-------- 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--------
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--------
Confidence 4567899999999999999888776 58999999 565442111 00000 124888888 875532
Q ss_pred CCceeEEEeccchh---hhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 103 ANQADLVCCFQHLQ---MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 103 ~~~fD~V~~~~~l~---~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..+||+|+|..+.+ +... ......++..+.++|||||.|++.++..
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d-~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVE-AGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHH-HHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cCCCCEEEECCccccCcchhh-HHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 46899999977653 2111 1111257889999999999999987655
No 230
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.30 E-value=9e-12 Score=100.90 Aligned_cols=102 Identities=19% Similarity=0.105 Sum_probs=80.4
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||||||+|-++..+. +...|+|+|||+.|++.+++.....+ .+..+.++|....++ ++++|+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~-------~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPP-------AEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCC-------CCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCC-------CCCcchH
Confidence 467899999999998888876 55699999999999999999876654 457899999877665 5799999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++.-++|++ + .+.....+ ++...|+++|+++-.
T Consensus 173 Lllk~lh~L-E-~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 173 LIFKLLPLL-E-REQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp EEESCHHHH-H-HHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHHHHHh-h-hhchhhHH-HHHHHhcCCCEEEEc
Confidence 999888872 2 22223333 788899999877643
No 231
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.29 E-value=6.6e-12 Score=109.72 Aligned_cols=115 Identities=13% Similarity=0.085 Sum_probs=86.0
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.|++....++... +.++++|+.+. ...+.....+||+|+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~--~~~~~~~~~~fD~Ii 284 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDL--LRRLEKEGERFDLVV 284 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHH--HHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHH--HHHHHhcCCCeeEEE
Confidence 7889999999999999988877 5689999999999999999887665322 89999997442 111111256899999
Q ss_pred eccchh-----hhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 111 CFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 111 ~~~~l~-----~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+..... ...........++..+.++|+|||++++.+...
T Consensus 285 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 285 LDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp ECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 843210 011123557789999999999999999986554
No 232
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.29 E-value=6.9e-12 Score=108.30 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=81.2
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+|||||||+|..+..++.. +..+++++|+ +.+++.|++. .++.++++|+.+ ++ + .||
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~-------p-~~D 248 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFT-SI-------P-NAD 248 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTT-CC-------C-CCS
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccC-CC-------C-Ccc
Confidence 346789999999999999988876 3448999999 9999877641 128999999865 33 2 399
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccC---CcEEEEEe
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKP---GGYFLGIT 146 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~~i~~~ 146 (248)
+|++..++|+ .+.+....+++++.++|+| ||.+++..
T Consensus 249 ~v~~~~~lh~--~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 249 AVLLKYILHN--WTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EEEEESCGGG--SCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred EEEeehhhcc--CCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 9999999998 4566677999999999999 99998873
No 233
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.29 E-value=5.4e-12 Score=108.20 Aligned_cols=112 Identities=14% Similarity=0.075 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhc--CC-CceEEEEEcCCCCCchhhhhcccCCc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
+++.+|||||||+|..+..++.. +..+|+++|+|+.+++.|++.+... +. ..++.++++|+.+ +.... .+++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~--~l~~~--~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA--FLKNA--AEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH--HHHTS--CTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH--HHHhc--cCCC
Confidence 46689999999999999888876 3469999999999999999876531 11 1358999999743 11101 2468
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
||+|++....+...........+++++.++|+|||++++.
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9999986532210000011368999999999999999997
No 234
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.27 E-value=1.2e-11 Score=104.88 Aligned_cols=111 Identities=10% Similarity=0.083 Sum_probs=80.4
Q ss_pred CeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEe
Q 025754 33 VTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (248)
Q Consensus 33 ~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (248)
.+|||||||+|..+..++.. +..+++++|+++.+++.|++.+... ...++.++++|+.+ +.... .+++||+|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~--~l~~~--~~~~fDvIi~ 165 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARM--VAESF--TPASRDVIIR 165 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHH--HHHTC--CTTCEEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHH--HHhhc--cCCCCCEEEE
Confidence 49999999999999988873 4458999999999999999887532 12358999999743 11111 2578999998
Q ss_pred ccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
....+......-...++++.++++|+|||++++...+
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 6543321100001268999999999999999988653
No 235
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.26 E-value=1.4e-12 Score=101.35 Aligned_cols=93 Identities=11% Similarity=0.064 Sum_probs=72.9
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
+.++.+|||+|||+ +++|+|+.|++.|+++... ++.+.++|+.+.++.. ..+++||+
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~---~~~~~fD~ 66 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSA---HKESSFDI 66 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGC---CCSSCEEE
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCcccc---CCCCCEeE
Confidence 66899999999986 2399999999999988643 2788999986544310 03678999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|+|..++|++. ++...++++++++|||||.+++..|
T Consensus 67 V~~~~~l~~~~---~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 67 ILSGLVPGSTT---LHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEECCSTTCCC---CCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECChhhhcc---cCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 99999999841 2247899999999999999999633
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.24 E-value=1.1e-11 Score=106.82 Aligned_cols=109 Identities=22% Similarity=0.263 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCC------CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCC
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALI------ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~------~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (248)
++.+|||+|||+|.++..++.... .+++|+|+++.+++.|+......+. ++.+.++|..... ...
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~-------~~~ 200 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL-------LVD 200 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC-------CCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc-------ccC
Confidence 567999999999999887765421 4899999999999999987765543 4789999986532 257
Q ss_pred ceeEEEeccchhhhcCCHHH---------------HHHHHHHHhccccCCcEEEEEecCh
Q 025754 105 QADLVCCFQHLQMCFETEER---------------ARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~---------------~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+||+|++...+++ +...+. ...+++.+.+.|+|||.+++.+|++
T Consensus 201 ~fD~Ii~NPPfg~-~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 201 PVDVVISDLPVGY-YPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CEEEEEEECCCSE-ESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CccEEEECCCCCC-cCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 8999999876554 222221 1268999999999999999998654
No 237
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.22 E-value=3.7e-11 Score=103.18 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=81.9
Q ss_pred HHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
...+.++.+|||+|||+|.++.. +. +..+|+|+|+|+.+++.|++....++...++.++++|+.+. .++
T Consensus 190 ~~~~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~---------~~~ 258 (336)
T 2yx1_A 190 MKKVSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV---------DVK 258 (336)
T ss_dssp HHHCCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC---------CCC
T ss_pred HHhcCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh---------cCC
Confidence 34556889999999999999888 66 56699999999999999999887765434689999998442 168
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
||+|++... ++ ...++..+.++|+|||.+++....
T Consensus 259 fD~Vi~dpP-~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 259 GNRVIMNLP-KF-------AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp EEEEEECCT-TT-------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CcEEEECCc-Hh-------HHHHHHHHHHHcCCCCEEEEEEee
Confidence 999988532 11 236888899999999998886433
No 238
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.20 E-value=1.3e-10 Score=98.21 Aligned_cols=79 Identities=19% Similarity=0.185 Sum_probs=59.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++..+ .+|+|+|+|+.+++.++++....+. .++.++++|+...++ .+||+
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~--------~~~D~ 109 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF--------PKFDV 109 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC--------CCCSE
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc--------ccCCE
Confidence 4578899999999999999987764 4999999999999999988764332 358899999876443 47999
Q ss_pred EEeccchhh
Q 025754 109 VCCFQHLQM 117 (248)
Q Consensus 109 V~~~~~l~~ 117 (248)
|++....+.
T Consensus 110 Vv~n~py~~ 118 (299)
T 2h1r_A 110 CTANIPYKI 118 (299)
T ss_dssp EEEECCGGG
T ss_pred EEEcCCccc
Confidence 998765553
No 239
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.20 E-value=2.8e-11 Score=107.75 Aligned_cols=111 Identities=19% Similarity=0.094 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
.++.+|||+|||+|..+..++.. +.+.|+|+|+|+.+++.++++....+.. +.++++|+.... .. ..++||
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~--~~---~~~~FD 172 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALA--EA---FGTYFH 172 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHH--HH---HCSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhh--hh---ccccCC
Confidence 47899999999999999888865 3358999999999999999988876643 788888874422 11 257899
Q ss_pred EEEecc------chhhh-----cCC-------HHHHHHHHHHHhccccCCcEEEEEec
Q 025754 108 LVCCFQ------HLQMC-----FET-------EERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 108 ~V~~~~------~l~~~-----~~~-------~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
+|++.. .++.- ..+ ......+++++.++|||||+++.++.
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 998521 11100 001 12237899999999999999998743
No 240
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.20 E-value=1.8e-10 Score=102.67 Aligned_cols=114 Identities=21% Similarity=0.179 Sum_probs=82.3
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||+|||+|..+..++.. +.+.++|+|+++.+++.++++....+. .++.++++|+..... .+ .+++|
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~--~~--~~~~f 331 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPE--II--GEEVA 331 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSS--SS--CSSCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcch--hh--ccCCC
Confidence 347889999999999999888775 225999999999999999998876543 248899999876431 01 23689
Q ss_pred eEEEec------cchhhh------c--CCH----HHHHHHHHHHhccccCCcEEEEEec
Q 025754 107 DLVCCF------QHLQMC------F--ETE----ERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 107 D~V~~~------~~l~~~------~--~~~----~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|+|++. ..++.. . ... .....+++++.++|||||.++.++.
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999862 222210 0 000 1126789999999999999998744
No 241
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.19 E-value=4.6e-11 Score=103.35 Aligned_cols=97 Identities=16% Similarity=0.135 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.+..+|||||||+|..+..++... ..+++++|+ +.+++.|++. .++.++++|+.+ ++ + .||+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~-------~-~~D~ 254 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-------ENLNFVGGDMFK-SI-------P-SADA 254 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-------SSEEEEECCTTT-CC-------C-CCSE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-------CCcEEEeCccCC-CC-------C-CceE
Confidence 366899999999999999988763 348999999 7888766531 138999999866 33 2 4999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccC---CcEEEEE
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKP---GGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~~i~~ 145 (248)
|++..++|+ .+.+....+++++.++|+| ||.+++.
T Consensus 255 v~~~~vlh~--~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 255 VLLKWVLHD--WNDEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred EEEcccccC--CCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 999999998 4566677999999999999 9999886
No 242
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.17 E-value=8.8e-11 Score=105.28 Aligned_cols=111 Identities=12% Similarity=0.026 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
++.+|||+|||+|..+..++.. +.+.|+|+|+|+.+++.++++....+. .++.++++|+...... .+++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-~nv~~~~~D~~~~~~~-----~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-SNVALTHFDGRVFGAA-----VPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCCSTTHHHH-----STTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCCHHHhhhh-----ccccCCE
Confidence 7889999999999999888875 346899999999999999998876543 2488999998663321 2568999
Q ss_pred EEecc------chhhh-----cCCH-------HHHHHHHHHHhccccCCcEEEEEec
Q 025754 109 VCCFQ------HLQMC-----FETE-------ERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 109 V~~~~------~l~~~-----~~~~-------~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
|++.. .++.. ..+. .....++.++.++|||||+++.++.
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 98731 12110 0111 1245789999999999999998754
No 243
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.16 E-value=3e-10 Score=100.45 Aligned_cols=110 Identities=21% Similarity=0.093 Sum_probs=80.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|.++..++... .+|+|+|+|+.|++.|++....++.. +.|+++|+.+.. ..+||+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~--------~~~fD~ 356 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVS--------VKGFDT 356 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCC--------CTTCSE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcC--------ccCCCE
Confidence 5678899999999999999887764 49999999999999999988766543 899999986632 227999
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHH
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQ 157 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~ 157 (248)
|++...-.. . ...+++.+. .|+|||++++++ +...+.+.+.
T Consensus 357 Vv~dPPr~g--~----~~~~~~~l~-~l~p~givyvsc-~p~tlarDl~ 397 (425)
T 2jjq_A 357 VIVDPPRAG--L----HPRLVKRLN-REKPGVIVYVSC-NPETFARDVK 397 (425)
T ss_dssp EEECCCTTC--S----CHHHHHHHH-HHCCSEEEEEES-CHHHHHHHHH
T ss_pred EEEcCCccc--h----HHHHHHHHH-hcCCCcEEEEEC-ChHHHHhHHh
Confidence 988653211 1 123444444 489999998874 5555554443
No 244
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.16 E-value=1.9e-10 Score=101.95 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
.++.+|||+|||+|..+..++.... +.++|+|+++.+++.++++....+. ++.++++|+..... .+ .+++||+
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~--~~--~~~~fD~ 318 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQ--WC--GEQQFDR 318 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHH--HH--TTCCEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchh--hc--ccCCCCE
Confidence 4788999999999999988887632 6999999999999999998876553 37889999876441 11 3468999
Q ss_pred EEecc------chhhhc-----CCH-------HHHHHHHHHHhccccCCcEEEEEe
Q 025754 109 VCCFQ------HLQMCF-----ETE-------ERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 109 V~~~~------~l~~~~-----~~~-------~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|++.. .++..- .+. .....+++++.++|||||.++.++
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 98621 221100 011 112588999999999999999875
No 245
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.15 E-value=6.5e-11 Score=98.16 Aligned_cols=100 Identities=10% Similarity=-0.025 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhc--C-CCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--R-KNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~--~-~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
+.+.+|||||||+|..+..++..+ .+++++|+++.+++.|++.+... + ...++.++.+|+.. + . ++|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~--~------~-~~f 140 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDL--D------I-KKY 140 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGS--C------C-CCE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHH--H------H-hhC
Confidence 356799999999999988887776 89999999999999998765321 0 11248888888743 1 1 679
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|+|++... .+. .+++.+.++|+|||++++...+
T Consensus 141 D~Ii~d~~-----dp~----~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 141 DLIFCLQE-----PDI----HRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp EEEEESSC-----CCH----HHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEECCC-----ChH----HHHHHHHHhcCCCcEEEEEcCC
Confidence 99988631 222 3899999999999999987443
No 246
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.13 E-value=8.6e-11 Score=104.45 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=81.1
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
.++.+|||+|||+|+.+..++.. +.+.|+++|+|+.+++.++++....+.. ++.+.++|+.... .. .+++||
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~--~~---~~~~FD 177 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELV--PH---FSGFFD 177 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHH--HH---HTTCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhh--hh---ccccCC
Confidence 47899999999999999888765 3468999999999999999988766532 4788888874421 11 257899
Q ss_pred EEEeccch--hhhcC-CH---------------HHHHHHHHHHhccccCCcEEEEEec
Q 025754 108 LVCCFQHL--QMCFE-TE---------------ERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 108 ~V~~~~~l--~~~~~-~~---------------~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
+|++..-. ..++. .. .....++.++.++|||||.++.++.
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99874310 00001 11 1234889999999999999998644
No 247
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.12 E-value=1.7e-10 Score=100.71 Aligned_cols=124 Identities=16% Similarity=0.149 Sum_probs=88.7
Q ss_pred HHHHHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCC---------------------------------------CeEEE
Q 025754 20 AKTALIKIY-SHPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIG 59 (248)
Q Consensus 20 ~~~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~---------------------------------------~~v~g 59 (248)
+...++... ..++.+|||++||+|.++...+.... ..++|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 333444433 34788999999999998877654311 36999
Q ss_pred EeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccC-
Q 025754 60 IDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP- 138 (248)
Q Consensus 60 iDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp- 138 (248)
+|+++.|++.|+......+....+.+.++|+.+... +.+||+|++.--...-....+.+..+...+.+.|++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS-------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC-------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc-------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 999999999999988776654468999999866432 468999999654332112234566777777777766
Q ss_pred -CcEEEEEecChh
Q 025754 139 -GGYFLGITPDSS 150 (248)
Q Consensus 139 -gG~~i~~~~~~~ 150 (248)
||.+++.+++..
T Consensus 336 ~g~~~~iit~~~~ 348 (385)
T 3ldu_A 336 KNWSYYLITSYED 348 (385)
T ss_dssp BSCEEEEEESCTT
T ss_pred CCCEEEEEECCHH
Confidence 888888888765
No 248
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.12 E-value=1.2e-09 Score=91.97 Aligned_cols=85 Identities=13% Similarity=0.010 Sum_probs=67.3
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
.+++.. ..++.+|||||||+|..+..++... .+|+|+|+++.+++.+++++.... ++.++++|+.+.++
T Consensus 41 ~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~~---~v~vi~gD~l~~~~------ 110 (295)
T 3gru_A 41 KAVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELYN---NIEIIWGDALKVDL------ 110 (295)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCS---SEEEEESCTTTSCG------
T ss_pred HHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccCC---CeEEEECchhhCCc------
Confidence 334433 4578899999999999999998874 599999999999999999886432 48999999988666
Q ss_pred cCCceeEEEeccchhh
Q 025754 102 KANQADLVCCFQHLQM 117 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~ 117 (248)
...+||.|+++...+.
T Consensus 111 ~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 111 NKLDFNKVVANLPYQI 126 (295)
T ss_dssp GGSCCSEEEEECCGGG
T ss_pred ccCCccEEEEeCcccc
Confidence 3457999998765443
No 249
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.11 E-value=6.5e-10 Score=96.94 Aligned_cols=124 Identities=12% Similarity=0.062 Sum_probs=91.1
Q ss_pred HHHHHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCC---------------------------------------CeEEE
Q 025754 20 AKTALIKIY-SHPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIG 59 (248)
Q Consensus 20 ~~~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~---------------------------------------~~v~g 59 (248)
+...++... ..++..|||++||+|.++...+.... ..++|
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 333344333 35788999999999998876654311 35999
Q ss_pred EeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccC-
Q 025754 60 IDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP- 138 (248)
Q Consensus 60 iDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp- 138 (248)
+|+|+.|++.|++.....+....+.+.++|+.+... ..+||+|++.--.+.-....+.+..+...+.+.|++
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~ 334 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT-------NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPL 334 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC-------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTC
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc-------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhC
Confidence 999999999999988777655568999999866443 358999999743332234566777777777777765
Q ss_pred -CcEEEEEecChh
Q 025754 139 -GGYFLGITPDSS 150 (248)
Q Consensus 139 -gG~~i~~~~~~~ 150 (248)
||.+++.+++..
T Consensus 335 ~g~~~~iit~~~~ 347 (384)
T 3ldg_A 335 KTWSQFILTNDTD 347 (384)
T ss_dssp TTSEEEEEESCTT
T ss_pred CCcEEEEEECCHH
Confidence 999999888765
No 250
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.11 E-value=1.2e-09 Score=96.83 Aligned_cols=114 Identities=17% Similarity=0.139 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
.++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++.....+.. ++.|+++|+.+... .++...++||+|
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~--~~~~~~~~fD~V 360 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVT--KQPWAKNGFDKV 360 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCS--SSGGGTTCCSEE
T ss_pred CCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhh--hhhhhcCCCCEE
Confidence 46789999999999999999877 459999999999999999988665532 58999999876211 000134689999
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHH
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 156 (248)
++.---.. ...+++.+.+ ++|+++++++ .+...+.+..
T Consensus 361 v~dPPr~g-------~~~~~~~l~~-~~p~~ivyvs-c~p~tlard~ 398 (433)
T 1uwv_A 361 LLDPARAG-------AAGVMQQIIK-LEPIRIVYVS-CNPATLARDS 398 (433)
T ss_dssp EECCCTTC-------CHHHHHHHHH-HCCSEEEEEE-SCHHHHHHHH
T ss_pred EECCCCcc-------HHHHHHHHHh-cCCCeEEEEE-CChHHHHhhH
Confidence 88543221 1134444433 6898888775 3444444443
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.10 E-value=3e-10 Score=99.44 Aligned_cols=124 Identities=19% Similarity=0.121 Sum_probs=87.1
Q ss_pred HHHHHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCC---------------------------------------CeEEE
Q 025754 20 AKTALIKIY-SHPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIG 59 (248)
Q Consensus 20 ~~~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~---------------------------------------~~v~g 59 (248)
+...++... ..++..|||++||+|.++...+.... ..++|
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 333444433 34778999999999998876654311 35999
Q ss_pred EeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccC-
Q 025754 60 IDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP- 138 (248)
Q Consensus 60 iDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp- 138 (248)
+|+|+.|++.|+......+....+.+.++|+.+... +.+||+|+++--...-....+.+..+...+.+.|++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 999999999999988776655568999999866443 458999999843221112234556666666666655
Q ss_pred -CcEEEEEecChh
Q 025754 139 -GGYFLGITPDSS 150 (248)
Q Consensus 139 -gG~~i~~~~~~~ 150 (248)
||.+++.+++..
T Consensus 342 ~g~~~~iit~~~~ 354 (393)
T 3k0b_A 342 PTWSVYVLTSYEL 354 (393)
T ss_dssp TTCEEEEEECCTT
T ss_pred CCCEEEEEECCHH
Confidence 999888888765
No 252
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.08 E-value=2.4e-10 Score=100.71 Aligned_cols=110 Identities=18% Similarity=0.222 Sum_probs=78.4
Q ss_pred HHHHHhc-CCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhh
Q 025754 23 ALIKIYS-HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (248)
Q Consensus 23 ~li~~~~-~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (248)
.+++... .++.+|||+|||+|.++..++.. ...+++|+|+++.+++.| . ++.++++|+.+..
T Consensus 30 ~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------~----~~~~~~~D~~~~~----- 94 (421)
T 2ih2_A 30 FMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------P----WAEGILADFLLWE----- 94 (421)
T ss_dssp HHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------T----TEEEEESCGGGCC-----
T ss_pred HHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------C----CCcEEeCChhhcC-----
Confidence 3444333 35679999999999999888764 345999999999999877 1 3789999985532
Q ss_pred cccCCceeEEEeccchhhhcC--------CHH-----------------HHHHHHHHHhccccCCcEEEEEecCh
Q 025754 100 QEKANQADLVCCFQHLQMCFE--------TEE-----------------RARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~--------~~~-----------------~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..++||+|+++--....-. ..+ ....+++.+.++|+|||.+++.+|+.
T Consensus 95 --~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 95 --PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp --CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred --ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 2468999999521110000 011 12367999999999999999998874
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.08 E-value=1.4e-10 Score=103.30 Aligned_cols=112 Identities=18% Similarity=0.113 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCCCccHhHHHHc--------------CCCeEEEEeCChHHHHHHHHHHHhcCCCc-eEEEEEcCCCCCch
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA--------------LIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENF 95 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~--------------~~~~v~giDis~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~ 95 (248)
++.+|||+|||+|+++..++.. ....++|+|+++.+++.|+.....++... ...+.++|....+.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 5679999999999998777643 22479999999999999988765554321 46788999866443
Q ss_pred hhhhcccCCceeEEEeccchhhhcCC-------------HHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 96 ETQMQEKANQADLVCCFQHLQMCFET-------------EERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~-------------~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..+||+|+++-.++..... ......+++.+.+.|+|||.+++.+|++
T Consensus 251 -------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 251 -------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp -------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred -------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 3489999997544321110 0112478999999999999999988764
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.08 E-value=1.5e-09 Score=93.09 Aligned_cols=125 Identities=13% Similarity=-0.004 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcC---CC----ceEEEEEcCCCCCchhhhhcccC
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR---KN----FIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~---~~----~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
++.+||+||||+|..+..+++.+..+++++|+++.+++.|++.+...+ .. .+++++++|+.. +........
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~--~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP--VLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH--HHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHH--HHHhhhccC
Confidence 567999999999999988887766799999999999999998764321 11 148999999744 211110125
Q ss_pred CceeEEEeccch-hhh-----cCCHHHHHHHHHHHhccccCCcEEEEEecC--hhHHHHHHH
Q 025754 104 NQADLVCCFQHL-QMC-----FETEERARRLLQNVSSLLKPGGYFLGITPD--SSTIWAKYQ 157 (248)
Q Consensus 104 ~~fD~V~~~~~l-~~~-----~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~--~~~~~~~~~ 157 (248)
++||+|++...- ... +.+.+-...+++.+.++|+|||+++....+ ...+...++
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~ 327 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYE 327 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHH
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHH
Confidence 789999886422 110 111233344444459999999999988333 244444444
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.03 E-value=2.2e-09 Score=89.29 Aligned_cols=106 Identities=15% Similarity=0.019 Sum_probs=75.1
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
.+++.. ..++ +|||||||+|..+..++..+ .+|+|+|+++.|++.+++++... ++.++++|+.+.++..
T Consensus 38 ~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~~----~v~vi~~D~l~~~~~~---- 107 (271)
T 3fut_A 38 RIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGL----PVRLVFQDALLYPWEE---- 107 (271)
T ss_dssp HHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTTS----SEEEEESCGGGSCGGG----
T ss_pred HHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCCC----CEEEEECChhhCChhh----
Confidence 344444 4577 99999999999999998876 58999999999999999887642 4899999997766521
Q ss_pred cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
...+|.|+++.-.+ .+.+-+..+++. ..-..+++++.
T Consensus 108 -~~~~~~iv~NlPy~---iss~il~~ll~~---~~~~~~~lm~Q 144 (271)
T 3fut_A 108 -VPQGSLLVANLPYH---IATPLVTRLLKT---GRFARLVFLVQ 144 (271)
T ss_dssp -SCTTEEEEEEECSS---CCHHHHHHHHHH---CCEEEEEEEEE
T ss_pred -ccCccEEEecCccc---ccHHHHHHHhcC---CCCCEEEEEee
Confidence 13578887765433 244555566654 11234555554
No 256
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.01 E-value=9.4e-10 Score=95.76 Aligned_cols=105 Identities=10% Similarity=0.002 Sum_probs=79.4
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhc---------------CCCceEEEEEcCCCCCc
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ---------------RKNFIAEFFEADPCAEN 94 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~---------------~~~~~~~~~~~d~~~~~ 94 (248)
++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++..+.+ +.. ++.++++|+...
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~- 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRL- 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHH-
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHH-
Confidence 6889999999999999888876 5558999999999999999987765 432 388999997432
Q ss_pred hhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 95 FETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 95 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+.....+||+|++.- . + . ...++..+.+.|++||+++++..+.
T Consensus 125 ----~~~~~~~fD~I~lDP-~-~--~----~~~~l~~a~~~lk~gG~l~vt~td~ 167 (378)
T 2dul_A 125 ----MAERHRYFHFIDLDP-F-G--S----PMEFLDTALRSAKRRGILGVTATDG 167 (378)
T ss_dssp ----HHHSTTCEEEEEECC-S-S--C----CHHHHHHHHHHEEEEEEEEEEECCH
T ss_pred ----HHhccCCCCEEEeCC-C-C--C----HHHHHHHHHHhcCCCCEEEEEeecc
Confidence 111245799998643 1 1 1 2467788888999999998886544
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.00 E-value=4.8e-09 Score=91.11 Aligned_cols=113 Identities=12% Similarity=0.136 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc--------
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-------- 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------- 102 (248)
.+.+|||+|||+|.++..++. ...+|+|+|+|+.+++.|++....++. .++.|+++|+.+ +...+...
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~--~~~~~~~~~~~~~l~~ 288 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEE--FTQAMNGVREFNRLQG 288 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHH--HHHHHSSCCCCTTGGG
T ss_pred CCCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHH--HHHHHhhccccccccc
Confidence 467899999999999988766 445999999999999999988776553 358999999844 21111100
Q ss_pred ----CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHH
Q 025754 103 ----ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQ 157 (248)
Q Consensus 103 ----~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~ 157 (248)
..+||+|++.---. .+..++.+.|+++|.++....+...+.+.+.
T Consensus 289 ~~~~~~~fD~Vv~dPPr~----------g~~~~~~~~l~~~g~ivyvsc~p~t~ard~~ 337 (369)
T 3bt7_A 289 IDLKSYQCETIFVDPPRS----------GLDSETEKMVQAYPRILYISCNPETLCKNLE 337 (369)
T ss_dssp SCGGGCCEEEEEECCCTT----------CCCHHHHHHHTTSSEEEEEESCHHHHHHHHH
T ss_pred cccccCCCCEEEECcCcc----------ccHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 13799998754211 1223445556688888888788777665554
No 258
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.99 E-value=5.4e-10 Score=93.70 Aligned_cols=97 Identities=15% Similarity=0.010 Sum_probs=67.9
Q ss_pred cCCCCeEEEEcCCC------CccHhHHHHc-C-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEE-EEcCCCCCchhhhh
Q 025754 29 SHPYVTVCDLYCGA------GVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEF-FEADPCAENFETQM 99 (248)
Q Consensus 29 ~~~~~~VLDlGcG~------G~~~~~l~~~-~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~ 99 (248)
++++.+|||+|||+ |. ..++.. + .++|+|+|+|+. + . ++.+ +++|+.+.++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------~----~v~~~i~gD~~~~~~---- 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------S----DADSTLIGDCATVHT---- 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------C----SSSEEEESCGGGCCC----
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------C----CCEEEEECccccCCc----
Confidence 46889999999955 55 223332 3 359999999998 1 1 2678 9999866443
Q ss_pred cccCCceeEEEeccchhhh-------cCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 100 QEKANQADLVCCFQHLQMC-------FETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~-------~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
.++||+|++....+.. .........+++++.++|||||.|++....
T Consensus 121 ---~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 121 ---ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp ---SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ---cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 3689999996532210 011234568999999999999999997543
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.99 E-value=4.1e-09 Score=86.88 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=62.7
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (248)
.+++.. ..++.+|||||||+|..+..++... .+|+|+|+++.|++.+++++... .++.++++|+.+.++....
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~---~~v~~i~~D~~~~~~~~~~-- 93 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQ---KNITIYQNDALQFDFSSVK-- 93 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTC---TTEEEEESCTTTCCGGGSC--
T ss_pred HHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhC---CCcEEEEcchHhCCHHHhc--
Confidence 444444 4578899999999999999998776 59999999999999999987642 2489999999887764221
Q ss_pred cCCceeEE
Q 025754 102 KANQADLV 109 (248)
Q Consensus 102 ~~~~fD~V 109 (248)
...+||+|
T Consensus 94 ~~~~~~vv 101 (255)
T 3tqs_A 94 TDKPLRVV 101 (255)
T ss_dssp CSSCEEEE
T ss_pred cCCCeEEE
Confidence 13578844
No 260
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.98 E-value=7.6e-11 Score=96.72 Aligned_cols=104 Identities=10% Similarity=0.014 Sum_probs=71.3
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.|+++... ..++.++++|+.+.++. .+++| .
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~~~~-----~~~~f-~ 96 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL---NTRVTLIHQDILQFQFP-----NKQRY-K 96 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT---CSEEEECCSCCTTTTCC-----CSSEE-E
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc---CCceEEEECChhhcCcc-----cCCCc-E
Confidence 4478899999999999999998876 5999999999999988776542 23589999999775541 13578 4
Q ss_pred EEeccchhhhcCCHHHHHHHH--------------HHHhccccCCcEEEEE
Q 025754 109 VCCFQHLQMCFETEERARRLL--------------QNVSSLLKPGGYFLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l--------------~~~~~~LkpgG~~i~~ 145 (248)
|+++...+ .+......++ +.+.++|+|||.+.+.
T Consensus 97 vv~n~Py~---~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 97 IVGNIPYH---LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp EEEECCSS---SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred EEEeCCcc---ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 55432211 1122222222 5577777888766554
No 261
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.95 E-value=3.5e-09 Score=92.41 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCce-EEEEEcCCCCCchhhhhc-ccCCce
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFI-AEFFEADPCAENFETQMQ-EKANQA 106 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~-~~~~~f 106 (248)
++.+|||++||+|..+..++.. +.++|+++|+++.+++.+++..+.++...+ +.++++|+.+ + +. ...++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~--~---l~~~~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANF--F---LRKEWGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH--H---HHSCCSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHH--H---HHHhhCCCC
Confidence 5789999999999999888774 446899999999999999998887765445 8899999743 2 11 124579
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
|+|++.- + .. ...++..+.+.|+|||+++++..+..
T Consensus 127 D~V~lDP---~--g~---~~~~l~~a~~~Lk~gGll~~t~t~~~ 162 (392)
T 3axs_A 127 DYVDLDP---F--GT---PVPFIESVALSMKRGGILSLTATDTA 162 (392)
T ss_dssp EEEEECC---S--SC---CHHHHHHHHHHEEEEEEEEEEECCHH
T ss_pred cEEEECC---C--cC---HHHHHHHHHHHhCCCCEEEEEecchh
Confidence 9998765 1 11 23477888889999999998865443
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.89 E-value=1.4e-08 Score=83.08 Aligned_cols=69 Identities=7% Similarity=-0.001 Sum_probs=55.1
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCch
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
.+++.. ..++.+|||||||+|..+..++..+ .+++|+|+|+.+++.++++.... .++.++++|+.+.++
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKF 90 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCC
T ss_pred HHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCc
Confidence 344433 3478899999999999999998876 59999999999999999887542 248999999876554
No 263
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.86 E-value=5.7e-09 Score=94.96 Aligned_cols=114 Identities=16% Similarity=0.113 Sum_probs=80.8
Q ss_pred CCCeEEEEcCCCCccHhHHHHc----C---------------CCeEEEEeCChHHHHHHHHHHHhcCCCc----eEEEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA----L---------------IANYIGIDVATSGIGEARDTWENQRKNF----IAEFFE 87 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~----~---------------~~~v~giDis~~~l~~a~~~~~~~~~~~----~~~~~~ 87 (248)
++.+|||.|||+|+++..+... . ...++|+|+++.+++.|+....-++... +..+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 5779999999999988766542 1 1379999999999999988765544321 156788
Q ss_pred cCCCCCchhhhhcccCCceeEEEeccchhhhcCC----------HHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 88 ADPCAENFETQMQEKANQADLVCCFQHLQMCFET----------EERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 88 ~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~----------~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|....+.. ...+||+|+++--+...... ...-..+++.+.+.|+|||++.+.+|++
T Consensus 249 gDtL~~~~~-----~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 249 GNTLGSDGE-----NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp SCTTSHHHH-----TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCcccccc-----cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 987553321 24689999996533321110 1112368999999999999999998866
No 264
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.85 E-value=3e-09 Score=87.85 Aligned_cols=83 Identities=16% Similarity=0.073 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCCh-------HHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccC
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVAT-------SGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~-------~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
++.+|||+|||+|.++..++..+. +|+|+|+|+ .+++.|++.....+...++.++++|+.+ +.+.+.+..
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~--~l~~~~~~~ 159 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE--QMPALVKTQ 159 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH--HHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH--HHHhhhccC
Confidence 568999999999999999888754 899999999 9999887755433222248999999743 211111001
Q ss_pred CceeEEEeccchh
Q 025754 104 NQADLVCCFQHLQ 116 (248)
Q Consensus 104 ~~fD~V~~~~~l~ 116 (248)
++||+|++...++
T Consensus 160 ~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 160 GKPDIVYLDPMYP 172 (258)
T ss_dssp CCCSEEEECCCC-
T ss_pred CCccEEEECCCCC
Confidence 6899999865443
No 265
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.85 E-value=4.9e-08 Score=81.48 Aligned_cols=70 Identities=13% Similarity=0.167 Sum_probs=55.6
Q ss_pred HHHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCC---CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchh
Q 025754 22 TALIKIY-SHPYVTVCDLYCGAGVDVDKWETALI---ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (248)
Q Consensus 22 ~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~---~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (248)
..+++.. ..++.+|||||||+|..+..++.... ++|+|+|+|+.|++.++++. . .++.++++|+.+.++.
T Consensus 32 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~----~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 32 DAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G----ELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G----GGEEEEESCGGGCCGG
T ss_pred HHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C----CCcEEEECChhcCChh
Confidence 3444444 45789999999999999999987644 23999999999999999884 2 2489999999887764
No 266
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.84 E-value=2.9e-08 Score=84.05 Aligned_cols=113 Identities=11% Similarity=-0.025 Sum_probs=77.2
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||+|||+|+.+..++.. +.+.|+++|+++.+++.++++....+. .++.++++|+.+.... .. ...+|
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~--~~-~~~~f 175 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPS--DP-RYHEV 175 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTT--CG-GGTTE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCcc--cc-ccCCC
Confidence 347899999999999999888774 446999999999999999998876553 2488999998653321 00 01579
Q ss_pred eEEEecc------chhh---h-------cCCH----HHHHHHHHHHhccccCCcEEEEEe
Q 025754 107 DLVCCFQ------HLQM---C-------FETE----ERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 107 D~V~~~~------~l~~---~-------~~~~----~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|.|++.. .+.. . -... ....+++..+.++|+ ||+++..+
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 9998731 1110 0 0011 112457888888886 89888764
No 267
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.81 E-value=9.9e-09 Score=84.38 Aligned_cols=115 Identities=17% Similarity=0.162 Sum_probs=73.8
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
.+.++.+|||||||+|+++...+.. +...+.|+|++-++...... ......++..++.++....+ .++++
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~---~~~~g~~ii~~~~~~dv~~l------~~~~~ 141 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN---VQSLGWNIITFKDKTDIHRL------EPVKC 141 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC---CCBTTGGGEEEECSCCTTTS------CCCCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc---cCcCCCCeEEEeccceehhc------CCCCc
Confidence 4568889999999999999987665 55678899988543110000 00001124445665533333 46789
Q ss_pred eEEEeccchhhhcCC-HHH--HHHHHHHHhccccCC-cEEEEEecC--hhHH
Q 025754 107 DLVCCFQHLQMCFET-EER--ARRLLQNVSSLLKPG-GYFLGITPD--SSTI 152 (248)
Q Consensus 107 D~V~~~~~l~~~~~~-~~~--~~~~l~~~~~~Lkpg-G~~i~~~~~--~~~~ 152 (248)
|+|+|..+.+ .-.. .+. .-.+++.+.++|+|| |.|++-+.. +...
T Consensus 142 DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~ 192 (277)
T 3evf_A 142 DTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDV 192 (277)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHH
T ss_pred cEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccH
Confidence 9999988665 1111 121 123578889999999 999999888 5443
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.77 E-value=1.2e-08 Score=93.68 Aligned_cols=102 Identities=14% Similarity=0.083 Sum_probs=74.0
Q ss_pred CCeEEEEcCCCCccHhHHHHc---CCC--eEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 32 YVTVCDLYCGAGVDVDKWETA---LIA--NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~---~~~--~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
+..|||+|||+|-+....+++ ... +|++++-|+. ...|++....++...+++++++|+.+..+ +++.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~L-------PEKV 429 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWVA-------PEKA 429 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCCC-------SSCE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceeccC-------Cccc
Confidence 457999999999875443332 222 6899999974 45677777777777889999999988765 6789
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i 143 (248)
|+|++-.. .++...+. +.+++....+.|||||+++
T Consensus 430 DIIVSEwM-G~fLl~E~-mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELL-GSFADNEL-SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCC-BTTBGGGC-HHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcC-cccccccC-CHHHHHHHHHhcCCCcEEc
Confidence 99998542 22222233 3367888899999999874
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.77 E-value=3.5e-08 Score=81.05 Aligned_cols=69 Identities=12% Similarity=0.042 Sum_probs=55.6
Q ss_pred HHHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchh
Q 025754 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (248)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (248)
.+++.. ..++.+|||||||+|..+..++..+..+++|+|+|+.+++.++++ .. .++.++++|+.+.++.
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~~----~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-GD----ERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-CC----TTEEEECSCTTTCCGG
T ss_pred HHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-cC----CCeEEEEcchhhCChh
Confidence 344444 447889999999999999999887556999999999999999876 22 2489999999887763
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.76 E-value=3.7e-08 Score=83.04 Aligned_cols=81 Identities=14% Similarity=0.069 Sum_probs=61.9
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~f 106 (248)
..++.+|||+|||+|+++..++... ..+|+|+|+|+.|++.|+++....+ .++.++++|+...+ ..+.. ...+|
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~--~~l~~~g~~~~ 99 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREAD--FLLKTLGIEKV 99 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHH--HHHHHTTCSCE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHH--HHHHhcCCCCC
Confidence 4578899999999999999888763 4699999999999999999876543 35899999975532 11111 11579
Q ss_pred eEEEecc
Q 025754 107 DLVCCFQ 113 (248)
Q Consensus 107 D~V~~~~ 113 (248)
|.|++..
T Consensus 100 D~Vl~D~ 106 (301)
T 1m6y_A 100 DGILMDL 106 (301)
T ss_dssp EEEEEEC
T ss_pred CEEEEcC
Confidence 9998754
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.76 E-value=1.2e-08 Score=92.78 Aligned_cols=121 Identities=13% Similarity=0.033 Sum_probs=79.9
Q ss_pred HHHHhcCCCCeEEEEcCCCCccHhHHHHc--------C--------CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEE
Q 025754 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETA--------L--------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFE 87 (248)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~l~~~--------~--------~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~ 87 (248)
+++...+...+|||.|||+|+++...... . ...++|+|+++.++..|+....-++...++.+.+
T Consensus 237 mv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~ 316 (544)
T 3khk_A 237 IVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKN 316 (544)
T ss_dssp HHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSS
T ss_pred HHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceec
Confidence 33333333349999999999988765321 0 2379999999999999998776555433333467
Q ss_pred cCCCCCchhhhhcccCCceeEEEeccchhhh------------------------cCCH-HHHHHHHHHHhccccCCcEE
Q 025754 88 ADPCAENFETQMQEKANQADLVCCFQHLQMC------------------------FETE-ERARRLLQNVSSLLKPGGYF 142 (248)
Q Consensus 88 ~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~------------------------~~~~-~~~~~~l~~~~~~LkpgG~~ 142 (248)
+|....+.. ...+||+|+++--.... ..+. ..--.+++.+.+.|+|||.+
T Consensus 317 gDtL~~~~~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ 391 (544)
T 3khk_A 317 ADSFLDDQH-----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSM 391 (544)
T ss_dssp CCTTTSCSC-----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEE
T ss_pred cchhcCccc-----ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceE
Confidence 776543321 35689999995322110 0000 01125899999999999999
Q ss_pred EEEecCh
Q 025754 143 LGITPDS 149 (248)
Q Consensus 143 i~~~~~~ 149 (248)
.+.+|++
T Consensus 392 aiVlP~g 398 (544)
T 3khk_A 392 ALLLANG 398 (544)
T ss_dssp EEEEETH
T ss_pred EEEecch
Confidence 9998876
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.76 E-value=1.2e-07 Score=75.09 Aligned_cols=105 Identities=5% Similarity=-0.125 Sum_probs=74.0
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCC--CceEEEEEcCCCCCc-------------
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK--NFIAEFFEADPCAEN------------- 94 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~--~~~~~~~~~d~~~~~------------- 94 (248)
.+..+|||+||| ..+..++....++|+.+|.+++..+.|++.+...+. ..++.++.+|+....
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred hCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 356899999985 444455443346999999999999999998887765 568999999975431
Q ss_pred hhh---hhcc--cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 95 FET---QMQE--KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 95 ~~~---~~~~--~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+.. .+.. ..++||+|++.... ....+..+.+.|+|||++++.
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEET
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEEe
Confidence 111 1101 13789999886631 124556677899999999764
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.75 E-value=4.4e-08 Score=91.70 Aligned_cols=127 Identities=14% Similarity=0.054 Sum_probs=84.7
Q ss_pred HHHHHHHh-cCCCCeEEEEcCCCCccHhHHHHc-------------------------------------------CCCe
Q 025754 21 KTALIKIY-SHPYVTVCDLYCGAGVDVDKWETA-------------------------------------------LIAN 56 (248)
Q Consensus 21 ~~~li~~~-~~~~~~VLDlGcG~G~~~~~l~~~-------------------------------------------~~~~ 56 (248)
...++... .+++..|||++||+|.++...+.. ....
T Consensus 179 Aa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~ 258 (703)
T 3v97_A 179 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 258 (703)
T ss_dssp HHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCcc
Confidence 33444433 347789999999999988765532 1137
Q ss_pred EEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCHHHHHHH---HHHHh
Q 025754 57 YIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRL---LQNVS 133 (248)
Q Consensus 57 v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~---l~~~~ 133 (248)
++|+|+++.|++.|+......+....+.+.++|+.+.... ...++||+|+++--...-+...+.+..+ +.++.
T Consensus 259 i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~----~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~l 334 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP----LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIM 334 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS----CTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc----cccCCCCEEEeCCCccccccchhHHHHHHHHHHHHH
Confidence 9999999999999999888777655689999998653210 0123899999973221111223334444 44455
Q ss_pred ccccCCcEEEEEecChhH
Q 025754 134 SLLKPGGYFLGITPDSST 151 (248)
Q Consensus 134 ~~LkpgG~~i~~~~~~~~ 151 (248)
+.+.|||.+++.+++..-
T Consensus 335 k~~~~g~~~~ilt~~~~l 352 (703)
T 3v97_A 335 KNQFGGWNLSLFSASPDL 352 (703)
T ss_dssp HHHCTTCEEEEEESCHHH
T ss_pred HhhCCCCeEEEEeCCHHH
Confidence 555689999999888654
No 274
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.74 E-value=2.1e-07 Score=80.58 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=71.3
Q ss_pred CCeEEEEcCCCCccHhHHHHc----------------CCCeEEEEeCChHHHHHHHHHHHhcCC-----------CceEE
Q 025754 32 YVTVCDLYCGAGVDVDKWETA----------------LIANYIGIDVATSGIGEARDTWENQRK-----------NFIAE 84 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~----------------~~~~v~giDis~~~l~~a~~~~~~~~~-----------~~~~~ 84 (248)
..+|+|+|||+|..+..+... +.-++..-|+..+.-...-+.++.... ..+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 478999999999988776321 122677778777765544333322100 00111
Q ss_pred EEEcCCCC---CchhhhhcccCCceeEEEeccchhhhcCCH----------------------------------HHHHH
Q 025754 85 FFEADPCA---ENFETQMQEKANQADLVCCFQHLQMCFETE----------------------------------ERARR 127 (248)
Q Consensus 85 ~~~~d~~~---~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~----------------------------------~~~~~ 127 (248)
|+.+...+ ..+ +++++|+|++..++||+-..+ .++..
T Consensus 133 f~~gvpgSFy~rlf------P~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~ 206 (374)
T 3b5i_A 133 FVAGVPGSFYRRLF------PARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAE 206 (374)
T ss_dssp EEEEEESCTTSCCS------CTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccC------CCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHH
Confidence 22222211 112 578999999999999953211 26778
Q ss_pred HHHHHhccccCCcEEEEEecC
Q 025754 128 LLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 128 ~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+++..++.|+|||.+++++..
T Consensus 207 fL~~ra~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 207 FLRARAAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCEEEEEEec
Confidence 899999999999999999653
No 275
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.71 E-value=1.2e-07 Score=86.05 Aligned_cols=116 Identities=18% Similarity=0.107 Sum_probs=82.3
Q ss_pred CCCeEEEEcCCCCccHhHHHHc----CCCeEEEEeCChHHHHHHHHHHHhcCCC-ceEEEEEcCCCCCchhhhhcccCCc
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA----LIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~----~~~~v~giDis~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
++.+|||.|||+|+++...... +...++|+|+++.++..|+....-++.. .++.+.++|....+... ....+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~---~~~~~ 297 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPT---QEPTN 297 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCC---SSCCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccc---ccccc
Confidence 6789999999999999887654 2458999999999999998876555432 24788999986652100 03578
Q ss_pred eeEEEeccchhhhcC------------------CHHH-HHHHHHHHhcccc-CCcEEEEEecCh
Q 025754 106 ADLVCCFQHLQMCFE------------------TEER-ARRLLQNVSSLLK-PGGYFLGITPDS 149 (248)
Q Consensus 106 fD~V~~~~~l~~~~~------------------~~~~-~~~~l~~~~~~Lk-pgG~~i~~~~~~ 149 (248)
||+|+++--....+. +... --.+++.+.+.|+ |||++.+.+|++
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 999998632110000 0000 1248999999999 999999998876
No 276
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.68 E-value=2.1e-08 Score=87.71 Aligned_cols=79 Identities=16% Similarity=0.060 Sum_probs=61.1
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhc--CCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--RKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
+.++.+|||+|||+|..+..++..+ .+|+|+|+|+.|++.|+...... +. .++.++++|+.+. + ... ...+|
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~-L-~~~--~~~~f 164 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEY-L-PLI--KTFHP 164 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGS-H-HHH--HHHCC
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHh-h-hhc--cCCCc
Confidence 3458999999999999988887665 49999999999999999988755 43 4699999998552 1 111 13579
Q ss_pred eEEEecc
Q 025754 107 DLVCCFQ 113 (248)
Q Consensus 107 D~V~~~~ 113 (248)
|+|++.-
T Consensus 165 DvV~lDP 171 (410)
T 3ll7_A 165 DYIYVDP 171 (410)
T ss_dssp SEEEECC
T ss_pred eEEEECC
Confidence 9999853
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.67 E-value=4.5e-08 Score=80.53 Aligned_cols=83 Identities=8% Similarity=-0.068 Sum_probs=58.3
Q ss_pred HHHHh-cCCCCeEEEEcCCCCccHhHHHHcCCCe--EEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc
Q 025754 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETALIAN--YIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 24 li~~~-~~~~~~VLDlGcG~G~~~~~l~~~~~~~--v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
+++.. ..++.+|||||||+|..+. +.. . .+ |+|+|+++.|++.++++.... .++.++++|+...++.....
T Consensus 13 iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 13 IVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp HHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHH
T ss_pred HHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhc
Confidence 34443 4578899999999999999 654 3 46 999999999999998876432 24899999997766532210
Q ss_pred ccCCceeEEEecc
Q 025754 101 EKANQADLVCCFQ 113 (248)
Q Consensus 101 ~~~~~fD~V~~~~ 113 (248)
. .+..|.|+++.
T Consensus 87 ~-~~~~~~vvsNl 98 (252)
T 1qyr_A 87 K-MGQPLRVFGNL 98 (252)
T ss_dssp H-HTSCEEEEEEC
T ss_pred c-cCCceEEEECC
Confidence 0 12346666544
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.63 E-value=3.7e-08 Score=81.12 Aligned_cols=116 Identities=17% Similarity=0.127 Sum_probs=73.7
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
++.++.+|||||||+|+++...+.. +...+.|+|++..+...+.. ......++..+..++....+ ...++
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~---~~~~g~~ii~~~~~~dv~~l------~~~~~ 157 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM---RTTLGWNLIRFKDKTDVFNM------EVIPG 157 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC---CCBTTGGGEEEECSCCGGGS------CCCCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc---cccCCCceEEeeCCcchhhc------CCCCc
Confidence 3568889999999999999987654 56689999998764322211 00011123334433321122 46789
Q ss_pred eEEEeccchhhhcC-CHHH--HHHHHHHHhccccCC--cEEEEEecC--hhHHH
Q 025754 107 DLVCCFQHLQMCFE-TEER--ARRLLQNVSSLLKPG--GYFLGITPD--SSTIW 153 (248)
Q Consensus 107 D~V~~~~~l~~~~~-~~~~--~~~~l~~~~~~Lkpg--G~~i~~~~~--~~~~~ 153 (248)
|+|+|.++.+ .=. ..+. .-.+++-+..+|+|| |.|++-+.. +....
T Consensus 158 DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~ 210 (282)
T 3gcz_A 158 DTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIM 210 (282)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHH
T ss_pred CEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHH
Confidence 9999988766 111 1122 223577888999999 999999888 54433
No 279
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.62 E-value=3.1e-07 Score=85.86 Aligned_cols=116 Identities=14% Similarity=0.046 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcC----CCeEEEEeCChHHHHHHHHHHHhcC--C--Cce-EEEEEcCCCCCchhhhhc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETAL----IANYIGIDVATSGIGEARDTWENQR--K--NFI-AEFFEADPCAENFETQMQ 100 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~----~~~v~giDis~~~l~~a~~~~~~~~--~--~~~-~~~~~~d~~~~~~~~~~~ 100 (248)
+++.+|||.|||+|.++..++... ..+++|+|+++.+++.|+.+..... . ... ..+...|+......
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~---- 395 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE---- 395 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG----
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc----
Confidence 357899999999999998877642 2479999999999999954432211 0 111 23444444332111
Q ss_pred ccCCceeEEEeccchhhhcCCHH-------------------------HHHHHHHHHhccccCCcEEEEEecChh
Q 025754 101 EKANQADLVCCFQHLQMCFETEE-------------------------RARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~-------------------------~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
...+||+|+++--......... ....+++.+.+.|+|||.+.+.+|++-
T Consensus 396 -~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 396 -DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp -GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred -ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 2468999999643210001111 133478889999999999999988873
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.59 E-value=7.8e-08 Score=88.54 Aligned_cols=108 Identities=16% Similarity=0.044 Sum_probs=72.9
Q ss_pred CCeEEEEcCCCCccHhHHHHc----C----------CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh
Q 025754 32 YVTVCDLYCGAGVDVDKWETA----L----------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~----~----------~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (248)
+..|||+|||+|-++...+.+ + ..+|+++|.|+.++...+.+.. ++...+++++++|+.+..+..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 458999999999875432111 1 2389999999988766655544 455567999999997654310
Q ss_pred hhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEE
Q 025754 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (248)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i 143 (248)
. .+..++.|+|++-..- + |...+...+++..+.+.|||||+++
T Consensus 489 ~-~~~~ekVDIIVSElmG-s-fl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 K-DRGFEQPDIIVSELLG-S-FGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp H-HTTCCCCSEEEECCCB-T-TBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred c-cCCCCcccEEEEeccc-c-ccchhccHHHHHHHHHhCCCCcEEE
Confidence 0 0125789999986532 2 2223335567888889999999875
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.59 E-value=5.9e-07 Score=77.45 Aligned_cols=114 Identities=14% Similarity=-0.025 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcC-------CCceEEEEEcCCCCCchhhhhccc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR-------KNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
++..+||=||-|.|..+..+++.+..+++.+||++.+++.|++.+.... ...+++++.+|... +.......
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~--fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP--VLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH--HHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH--HHHhhhhc
Confidence 4668999999999999998888777899999999999999998653210 11237888888733 22111123
Q ss_pred CCceeEEEeccchhhh------cCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQMC------FETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~------~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.++||+|+.-..-... .....-..++++.+++.|+|||+++..
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 5689999875311000 001223478899999999999999876
No 282
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.58 E-value=3.2e-07 Score=79.60 Aligned_cols=112 Identities=14% Similarity=0.058 Sum_probs=71.6
Q ss_pred CCeEEEEcCCCCccHhHHHHc------------------CCCeEEEEeCC-----------hHHHHHHHHHHHhcCCCce
Q 025754 32 YVTVCDLYCGAGVDVDKWETA------------------LIANYIGIDVA-----------TSGIGEARDTWENQRKNFI 82 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~------------------~~~~v~giDis-----------~~~l~~a~~~~~~~~~~~~ 82 (248)
..+|+|+||++|..+..+... +.-+|..-|+. +.+.+..++. .+...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCC
Confidence 578999999999988766543 11267888877 3333332221 111112
Q ss_pred EEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhcCCH-----------------------------------HHHHH
Q 025754 83 AEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETE-----------------------------------ERARR 127 (248)
Q Consensus 83 ~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-----------------------------------~~~~~ 127 (248)
..|+.+...+ +...+. +.+++|+|++..++||+-..+ .++..
T Consensus 130 ~~f~~gvpgS--Fy~rlf-p~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 130 SCLIGAMPGS--FYSRLF-PEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp SEEEEECCSC--TTSCCS-CTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchh--hhhccC-CCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 3566665433 111000 578999999999999963221 23445
Q ss_pred HHHHHhccccCCcEEEEEecCh
Q 025754 128 LLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 128 ~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+|+...+.|+|||.+++++...
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHhccCCeEEEEEecC
Confidence 6888899999999999996643
No 283
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.58 E-value=1.2e-07 Score=81.65 Aligned_cols=110 Identities=15% Similarity=0.097 Sum_probs=77.7
Q ss_pred CCeEEEEcCCCCccHhHHHHc-----------------CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC--
Q 025754 32 YVTVCDLYCGAGVDVDKWETA-----------------LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-- 92 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~-----------------~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-- 92 (248)
..+|+|+||++|..+..+... +.-+|..-|+..+......+.........+..|+.+...+
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 467999999999888665432 1127899999999888777665431100013455554332
Q ss_pred -CchhhhhcccCCceeEEEeccchhhhcCC-----------------------------HHHHHHHHHHHhccccCCcEE
Q 025754 93 -ENFETQMQEKANQADLVCCFQHLQMCFET-----------------------------EERARRLLQNVSSLLKPGGYF 142 (248)
Q Consensus 93 -~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~~~LkpgG~~ 142 (248)
..+ +.+++|+|+++.++||+-.. ..++..+++...+.|+|||.+
T Consensus 132 ~rlf------p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 132 GRLF------PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp SCCS------CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred hccC------CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 222 57899999999999996321 246778899999999999999
Q ss_pred EEEec
Q 025754 143 LGITP 147 (248)
Q Consensus 143 i~~~~ 147 (248)
++++.
T Consensus 206 vl~~~ 210 (359)
T 1m6e_X 206 VLTIL 210 (359)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99955
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.57 E-value=1.7e-07 Score=78.36 Aligned_cols=113 Identities=11% Similarity=0.075 Sum_probs=81.8
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhc----CCCceEEEEEcCCCCCchhhhhcccC
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ----RKNFIAEFFEADPCAENFETQMQEKA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (248)
.+...+||=||-|.|..+..+++. +..+++.+||++.+++.+++.+... -...+++++.+|...- +....
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~-----l~~~~ 155 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF-----VNQTS 155 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT-----TSCSS
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH-----Hhhcc
Confidence 345689999999999999888876 4579999999999999999876431 1124689999998652 22346
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
++||+|++-..=.......--..++++.+++.|+|||+++...
T Consensus 156 ~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 7899998753211000000013578999999999999999873
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.47 E-value=4.3e-07 Score=75.28 Aligned_cols=117 Identities=15% Similarity=0.091 Sum_probs=72.8
Q ss_pred HhcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 27 IYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 27 ~~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
.++.++.+||||||++|+++..++.. +...|.|+|+...+...... . .....++..+..++.-..+ .+++
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~--~~~~~~iv~~~~~~di~~l------~~~~ 147 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-M--QTLGWNIVKFKDKSNVFTM------PTEP 147 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-C--CBTTGGGEEEECSCCTTTS------CCCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-c--cccCCceEEeecCceeeec------CCCC
Confidence 45668999999999999999999865 56689999997653211000 0 0000112223322211112 3578
Q ss_pred eeEEEeccchhhhcC-CHH--HHHHHHHHHhccccCC-cEEEEEecC--hhHHH
Q 025754 106 ADLVCCFQHLQMCFE-TEE--RARRLLQNVSSLLKPG-GYFLGITPD--SSTIW 153 (248)
Q Consensus 106 fD~V~~~~~l~~~~~-~~~--~~~~~l~~~~~~Lkpg-G~~i~~~~~--~~~~~ 153 (248)
+|+|+|..+.+ .-. ..+ ....++.-+..+|+|| |.|++-+.. +....
T Consensus 148 ~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~ 200 (300)
T 3eld_A 148 SDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVI 200 (300)
T ss_dssp CSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHH
T ss_pred cCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHH
Confidence 99999987665 111 111 1234577888999999 999999888 64433
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.43 E-value=2.5e-07 Score=68.78 Aligned_cols=89 Identities=17% Similarity=0.149 Sum_probs=61.3
Q ss_pred cCCCCeEEEEcCCCC-ccHhHHHH-cCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGAG-VDVDKWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G-~~~~~l~~-~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+|||+|||.| ..+..++. .+. .|+++|+++.+++ +++.|+++..+.. -..|
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~----------------~v~dDiF~P~~~~-----Y~~~ 90 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG----------------IVRDDITSPRMEI-----YRGA 90 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT----------------EECCCSSSCCHHH-----HTTE
T ss_pred CCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc----------------eEEccCCCCcccc-----cCCc
Confidence 345689999999999 47788876 566 8999999998765 7889998866521 1479
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
|+|.+.. +..+++..+-++.+. -|.-+++....
T Consensus 91 DLIYsir-------PP~El~~~i~~lA~~--v~adliI~pL~ 123 (153)
T 2k4m_A 91 ALIYSIR-------PPAEIHSSLMRVADA--VGARLIIKPLT 123 (153)
T ss_dssp EEEEEES-------CCTTTHHHHHHHHHH--HTCEEEEECBT
T ss_pred CEEEEcC-------CCHHHHHHHHHHHHH--cCCCEEEEcCC
Confidence 9997654 333344444445443 35566666333
No 287
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.38 E-value=3.2e-07 Score=74.49 Aligned_cols=114 Identities=19% Similarity=0.117 Sum_probs=69.4
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHh--cCCCceEEEEEc-CCCCCchhhhhcccC
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN--QRKNFIAEFFEA-DPCAENFETQMQEKA 103 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~--~~~~~~~~~~~~-d~~~~~~~~~~~~~~ 103 (248)
+++|+.+|+||||++|+++...+.. +...|.|.++..+- . -.. ... .+. .=+.|.++ |+++ + .+
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P-~~~~~~Gv-~~i~~~~G~Df~~--~------~~ 137 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEP-MLMQSYGW-NIVTMKSGVDVFY--K------PS 137 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCC-CCCCSTTG-GGEEEECSCCGGG--S------CC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCC-CcccCCCc-eEEEeeccCCccC--C------CC
Confidence 6789999999999999999888765 23344555554331 0 000 000 010 00345556 8754 2 24
Q ss_pred CceeEEEeccchh---hhcCCHHHHHHHHHHHhccccCCc-EEEEEecCh--hHHHH
Q 025754 104 NQADLVCCFQHLQ---MCFETEERARRLLQNVSSLLKPGG-YFLGITPDS--STIWA 154 (248)
Q Consensus 104 ~~fD~V~~~~~l~---~~~~~~~~~~~~l~~~~~~LkpgG-~~i~~~~~~--~~~~~ 154 (248)
.++|+|+|-++-. ...+....+. ++.-+.++|+||| .|++-+..+ ..+.+
T Consensus 138 ~~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~ 193 (269)
T 2px2_A 138 EISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFCIKILCPYMPKVIE 193 (269)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEEEEESCTTSHHHHH
T ss_pred CCCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEEEEECCCCchHHHH
Confidence 5899999977542 1112122233 6777789999999 898887766 55544
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.26 E-value=2.9e-06 Score=69.81 Aligned_cols=122 Identities=13% Similarity=0.165 Sum_probs=72.6
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-------CC------CeEEEEeCCh---HHHH-----------HHHHHHHh-------
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-------LI------ANYIGIDVAT---SGIG-----------EARDTWEN------- 76 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-------~~------~~v~giDis~---~~l~-----------~a~~~~~~------- 76 (248)
++.+|||+|||+|..+..+... .+ .+++++|..| +++. .|++....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 5579999999999887664331 22 3899999887 5544 33433322
Q ss_pred ------cCCCceEEEEEcCCCCCchhhhhcc-cCCceeEEEecc-chhhhcCCHH-HHHHHHHHHhccccCCcEEEEEec
Q 025754 77 ------QRKNFIAEFFEADPCAENFETQMQE-KANQADLVCCFQ-HLQMCFETEE-RARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 77 ------~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~~-~l~~~~~~~~-~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
.....++.++.+|+.+. .+.+.. ....||+|+... +... ..+ ....+++.+.++|+|||+|+. ..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~--l~~~~~~~~~~~D~iflD~fsp~~---~p~lw~~~~l~~l~~~L~pGG~l~t-ys 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINEL--ISQLDDSLNQKVDAWFLDGFAPAK---NPDMWTQNLFNAMARLARPGGTLAT-FT 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHH--GGGSCGGGTTCEEEEEECSSCTTT---CGGGCCHHHHHHHHHHEEEEEEEEE-SC
T ss_pred hhheeccCCceEEEEEECcHHHH--HhhcccccCCeEEEEEECCCCccc---ChhhcCHHHHHHHHHHcCCCcEEEE-Ee
Confidence 00113567888887441 111100 013799998743 2210 111 135789999999999999884 33
Q ss_pred ChhHHHHHHHH
Q 025754 148 DSSTIWAKYQK 158 (248)
Q Consensus 148 ~~~~~~~~~~~ 158 (248)
....+.+.+.+
T Consensus 214 aa~~vrr~L~~ 224 (257)
T 2qy6_A 214 SAGFVRRGLQE 224 (257)
T ss_dssp CBHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 34455555543
No 289
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.23 E-value=1.2e-06 Score=72.22 Aligned_cols=82 Identities=11% Similarity=-0.047 Sum_probs=56.8
Q ss_pred CCC--CeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhc-------C-CCceEEEEEcCCCCCchhhhh
Q 025754 30 HPY--VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ-------R-KNFIAEFFEADPCAENFETQM 99 (248)
Q Consensus 30 ~~~--~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~-------~-~~~~~~~~~~d~~~~~~~~~~ 99 (248)
.++ .+|||++||+|.++..++..+. +|+++|+++.+.+.++...+.. + ...+++++++|+.+ +...
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~--~L~~- 160 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT--ALTD- 160 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH--HSTT-
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH--HHHh-
Confidence 356 8999999999999999988766 7999999998765554432211 0 11248999999743 1111
Q ss_pred cccCCceeEEEeccchhh
Q 025754 100 QEKANQADLVCCFQHLQM 117 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~ 117 (248)
...+||+|++.-..+.
T Consensus 161 --~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 161 --ITPRPQVVYLDPMFPH 176 (258)
T ss_dssp --CSSCCSEEEECCCCCC
T ss_pred --CcccCCEEEEcCCCCC
Confidence 1347999998765543
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.22 E-value=6.2e-06 Score=68.19 Aligned_cols=75 Identities=11% Similarity=0.065 Sum_probs=58.4
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD 107 (248)
..++..++|.+||.|+++..++.. .++|+|+|.++.+++.|++ +.. .++.+++++..+ +...+.. ...++|
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~--l~~~L~~~g~~~vD 91 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRH--LKRHLAALGVERVD 91 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGG--HHHHHHHTTCSCEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcch--HHHHHHHcCCCCcC
Confidence 457899999999999999999887 4599999999999999988 644 248999999855 3222221 125799
Q ss_pred EEEe
Q 025754 108 LVCC 111 (248)
Q Consensus 108 ~V~~ 111 (248)
.|++
T Consensus 92 gIL~ 95 (285)
T 1wg8_A 92 GILA 95 (285)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8876
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.22 E-value=2.9e-05 Score=64.58 Aligned_cols=106 Identities=12% Similarity=-0.023 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCCCccHhHHHHc------CCCeEEEEeCChH--------------------------HHHHHHHHHHhcC
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA------LIANYIGIDVATS--------------------------GIGEARDTWENQR 78 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~------~~~~v~giDis~~--------------------------~l~~a~~~~~~~~ 78 (248)
...+|||+|+.+|..+..++.. ..++++++|.... .++.+++.++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 4678999999999988776543 2468999996421 4667777777665
Q ss_pred C-CceEEEEEcCCCCCchhhhhcc-cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 79 K-NFIAEFFEADPCAENFETQMQE-KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 79 ~-~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
. ..++.++.+|+.+ .++. ..++||+|.+-... -+.....++.+...|+|||++++.-.
T Consensus 186 l~~~~I~li~Gda~e-----tL~~~~~~~~d~vfIDaD~------y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKD-----TLPTAPIDTLAVLRMDGDL------YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCSTTEEEEESCHHH-----HSTTCCCCCEEEEEECCCS------HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCcCceEEEEeCHHH-----HHhhCCCCCEEEEEEcCCc------cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 4 2569999999733 1111 24689999876642 23356789999999999999998743
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.19 E-value=1.1e-05 Score=69.27 Aligned_cols=97 Identities=7% Similarity=-0.105 Sum_probs=65.8
Q ss_pred HhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 27 ~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..+.+|.+||||||++|+++..+...+. .|+|+|+.+-. . ..... .++.++++|...... ...++
T Consensus 207 ~~l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~-~----~l~~~---~~V~~~~~d~~~~~~------~~~~~ 271 (375)
T 4auk_A 207 ERLANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMA-Q----SLMDT---GQVTWLREDGFKFRP------TRSNI 271 (375)
T ss_dssp HHSCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCC-H----HHHTT---TCEEEECSCTTTCCC------CSSCE
T ss_pred ccCCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcC-h----hhccC---CCeEEEeCccccccC------CCCCc
Confidence 3466899999999999999999988775 99999987522 1 11111 248999999876544 34689
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i 143 (248)
|+|+|-++.. ......++.........++.++
T Consensus 272 D~vvsDm~~~-----p~~~~~l~~~wl~~~~~~~aI~ 303 (375)
T 4auk_A 272 SWMVCDMVEK-----PAKVAALMAQWLVNGWCRETIF 303 (375)
T ss_dssp EEEEECCSSC-----HHHHHHHHHHHHHTTSCSEEEE
T ss_pred CEEEEcCCCC-----hHHhHHHHHHHHhccccceEEE
Confidence 9999988543 3334445554444444444433
No 293
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.16 E-value=8.9e-06 Score=70.01 Aligned_cols=114 Identities=17% Similarity=0.004 Sum_probs=77.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCC-----CceEEEEEcCCCCCchhhhhccc
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRK-----NFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
..||.+|||+++|.|+=+..++... .+.+++.|+++.-+...++.....+. ...+...+.|...... . .
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~--~---~ 220 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE--L---E 220 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH--H---S
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch--h---c
Confidence 3488999999999999888777653 34799999999998888776654321 2347777887644221 1 3
Q ss_pred CCceeEEEeccch----hhhc---------CCH-------HHHHHHHHHHhccccCCcEEEEEec
Q 025754 103 ANQADLVCCFQHL----QMCF---------ETE-------ERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 103 ~~~fD~V~~~~~l----~~~~---------~~~-------~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
.+.||.|++-.-. +.+. ... ....+++.+..++|||||+++-++.
T Consensus 221 ~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 221 GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 5789999863210 1110 011 1235788999999999999887743
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.14 E-value=1.6e-05 Score=65.66 Aligned_cols=118 Identities=21% Similarity=0.204 Sum_probs=75.5
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEc-CCCCCchhhhhcccCCc
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEKANQ 105 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 105 (248)
.+.++..||||||++|+++...+.. +...|.|+|+...--+.-. ..+..++. -+.+.+. |+.... +.+
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w~-lV~~~~~~Dv~~l~--------~~~ 160 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGWN-IVTMKSGVDVFYRP--------SEC 160 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTGG-GEEEECSCCTTSSC--------CCC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCCc-ceEEEeccCHhhCC--------CCC
Confidence 4568889999999999999877655 5668999999765211000 00011111 1677776 764422 367
Q ss_pred eeEEEeccchhhhcCCHH----HHHHHHHHHhccccCC-cEEEEEecCh--hHHHHHHH
Q 025754 106 ADLVCCFQHLQMCFETEE----RARRLLQNVSSLLKPG-GYFLGITPDS--STIWAKYQ 157 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~----~~~~~l~~~~~~Lkpg-G~~i~~~~~~--~~~~~~~~ 157 (248)
+|+|+|..+ . .-.+.. ..-.+|+-+.+.|++| |-|++-+..+ ..+.+.+.
T Consensus 161 ~D~ivcDig-e-Ss~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~ 217 (321)
T 3lkz_A 161 CDTLLCDIG-E-SSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKME 217 (321)
T ss_dssp CSEEEECCC-C-CCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHH
T ss_pred CCEEEEECc-c-CCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHH
Confidence 999999765 2 112211 2234777778899998 8999888877 56655544
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.06 E-value=1.3e-05 Score=67.23 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=46.5
Q ss_pred HHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhc
Q 025754 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ 77 (248)
Q Consensus 22 ~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~ 77 (248)
..+|..+..++..|||++||+|..+...+..+. +++|+|+++.+++.|++++...
T Consensus 226 ~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 226 ERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 345666667899999999999998888777665 9999999999999999988653
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.95 E-value=4.3e-05 Score=69.23 Aligned_cols=116 Identities=15% Similarity=0.050 Sum_probs=73.9
Q ss_pred CCCeEEEEcCCCCccHhHHHHc--------------CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchh
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA--------------LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~--------------~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (248)
++.+|+|.+||+|+++...... ....+.|+|+++.+...|+...--++.. ...+.++|....+..
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPRIDPENSLRFPLR 295 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCEEECSCTTCSCGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-cccccccccccCchh
Confidence 6779999999999998765431 1236999999999999888755444321 245677777554432
Q ss_pred hhhcccCCceeEEEeccchhhh------------cCCHHHHHHHHHHHhcccc-------CCcEEEEEecCh
Q 025754 97 TQMQEKANQADLVCCFQHLQMC------------FETEERARRLLQNVSSLLK-------PGGYFLGITPDS 149 (248)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~~------------~~~~~~~~~~l~~~~~~Lk-------pgG~~i~~~~~~ 149 (248)
... ...+||+|+++--+..- ......-..+++.+.+.|+ |||++.+.+|++
T Consensus 296 ~~~--~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 296 EMG--DKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp GCC--GGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred hhc--ccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 111 23579999986432110 0111112345666666665 799999998875
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.87 E-value=2.1e-05 Score=62.95 Aligned_cols=117 Identities=18% Similarity=0.144 Sum_probs=74.5
Q ss_pred hcCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEc-CCCCCchhhhhcccCCc
Q 025754 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEKANQ 105 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 105 (248)
.+.++.+||||||++|+++...+.. +...|.|+|+-..--+.-+ ..+..++ ..+.|.++ |+.. + ++.+
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gw-n~v~fk~gvDv~~--~------~~~~ 144 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGW-NIVKLMSGKDVFY--L------PPEK 144 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTT-TSEEEECSCCGGG--C------CCCC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCc-CceEEEeccceee--c------CCcc
Confidence 3568889999999999999977665 5668999999764321000 0000111 12789888 8632 1 3467
Q ss_pred eeEEEeccchhhhcCCH----HHHHHHHHHHhccccCCcEEEEEecChhH--HHHHHH
Q 025754 106 ADLVCCFQHLQMCFETE----ERARRLLQNVSSLLKPGGYFLGITPDSST--IWAKYQ 157 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~----~~~~~~l~~~~~~LkpgG~~i~~~~~~~~--~~~~~~ 157 (248)
+|.|+|..+--. .+. ...-.+++-+.+.|++ |-|++-+..+.. +.+.+.
T Consensus 145 ~DtllcDIgeSs--~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~ 199 (267)
T 3p8z_A 145 CDTLLCDIGESS--PSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLE 199 (267)
T ss_dssp CSEEEECCCCCC--SCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHH
T ss_pred ccEEEEecCCCC--CChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHH
Confidence 999999765421 221 1223478888899998 788888666633 554443
No 298
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.59 E-value=0.00016 Score=59.36 Aligned_cols=56 Identities=21% Similarity=0.247 Sum_probs=46.3
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhc
Q 025754 21 KTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ 77 (248)
Q Consensus 21 ~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~ 77 (248)
-..+|..+..++..|||..||+|..+......+. +++|+|+++.+++.|++++...
T Consensus 202 ~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 202 IERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp HHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-
T ss_pred HHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhc
Confidence 3355666778999999999999998877766664 9999999999999999988654
No 299
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.54 E-value=5.6e-05 Score=79.57 Aligned_cols=103 Identities=21% Similarity=0.278 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCCCccHhHHHHc------CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCC-chhhhhccc
Q 025754 30 HPYVTVCDLYCGAGVDVDKWETA------LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQEK 102 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~~~------~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~ 102 (248)
++..+|||||.|+|..+..+... ...+++.+|+|+...+.|++++.... +..-..|..+. .+ .
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~~~~------~ 1308 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANPAPG------S 1308 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCCCC--------
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----cccccccccccccC------C
Confidence 46789999999999887665443 13479999999999888888776532 33322343221 11 2
Q ss_pred CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
...||+|++..++|. ..+....+.+++++|+|||++++..
T Consensus 1309 ~~~ydlvia~~vl~~----t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1309 LGKADLLVCNCALAT----LGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ---CCEEEEECC------------------------CCEEEEEE
T ss_pred CCceeEEEEcccccc----cccHHHHHHHHHHhcCCCcEEEEEe
Confidence 457999999998884 3456788999999999999988864
No 300
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.54 E-value=0.0017 Score=55.30 Aligned_cols=130 Identities=14% Similarity=0.136 Sum_probs=86.1
Q ss_pred chhhhhHhHHHHHHHHHh----c--CCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcC-----
Q 025754 11 LTHHRLYEFAKTALIKIY----S--HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQR----- 78 (248)
Q Consensus 11 ~~~~~~~~~~~~~li~~~----~--~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~----- 78 (248)
.|....--+++...++.. + ++...|+.||||.......+... +...++-+|. |++++..++.+...+
T Consensus 71 ~P~in~g~~~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~ 149 (334)
T 1rjd_A 71 FPVMNYGTYLRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRIS 149 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhh
Confidence 453332345555444433 2 45678999999999877777653 3236667776 778777766655431
Q ss_pred ---------------CCceEEEEEcCCCCCchhhh-hcc--cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCc
Q 025754 79 ---------------KNFIAEFFEADPCAENFETQ-MQE--KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGG 140 (248)
Q Consensus 79 ---------------~~~~~~~~~~d~~~~~~~~~-~~~--~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG 140 (248)
...+..++.+|+.+.+.... +.. ......++++-.++.| .+.+....+++.+.+.. |+|
T Consensus 150 l~~~~~~~~~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~Y--L~~~~~~~ll~~ia~~~-~~~ 226 (334)
T 1rjd_A 150 LGLSKEDTAKSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCY--MHNNESQLLINTIMSKF-SHG 226 (334)
T ss_dssp HTCCSSCCCCTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGG--SCHHHHHHHHHHHHHHC-SSE
T ss_pred cccccccccccccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhC--CCHHHHHHHHHHHHhhC-CCc
Confidence 12357899999988543211 111 2356789999999998 67889999999999887 677
Q ss_pred EEEE
Q 025754 141 YFLG 144 (248)
Q Consensus 141 ~~i~ 144 (248)
.+++
T Consensus 227 ~~v~ 230 (334)
T 1rjd_A 227 LWIS 230 (334)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.48 E-value=0.0002 Score=60.57 Aligned_cols=82 Identities=15% Similarity=0.048 Sum_probs=58.5
Q ss_pred HHHHh-cCCCCeEEEEcCCCCccHhHHHHc--CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc
Q 025754 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (248)
Q Consensus 24 li~~~-~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (248)
+++.+ ..|+..++|..||.|+++..++.. +.++|+|+|.++.+++.|+ ++.. .++.+++++..+ +...+.
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~~----~Rv~lv~~nF~~--l~~~L~ 121 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TIDD----PRFSIIHGPFSA--LGEYVA 121 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCCC----TTEEEEESCGGG--HHHHHH
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhcC----CcEEEEeCCHHH--HHHHHH
Confidence 34444 358899999999999999999876 3469999999999999884 4421 358899998744 332232
Q ss_pred cc--CCceeEEEec
Q 025754 101 EK--ANQADLVCCF 112 (248)
Q Consensus 101 ~~--~~~fD~V~~~ 112 (248)
.. .+++|.|+..
T Consensus 122 ~~g~~~~vDgILfD 135 (347)
T 3tka_A 122 ERDLIGKIDGILLD 135 (347)
T ss_dssp HTTCTTCEEEEEEE
T ss_pred hcCCCCcccEEEEC
Confidence 21 1368888663
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.43 E-value=0.00025 Score=58.61 Aligned_cols=100 Identities=15% Similarity=0.002 Sum_probs=64.6
Q ss_pred CCCCeEEEEcC------CCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc
Q 025754 30 HPYVTVCDLYC------GAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 30 ~~~~~VLDlGc------G~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
+.+.+|||+|+ .+|.....-. .+. +.++++|+.+-.. .. -.++++|+.... .
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~VLr~~-~p~g~~VVavDL~~~~s---------da----~~~IqGD~~~~~-------~ 166 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTAVLRQW-LPTGTLLVDSDLNDFVS---------DA----DSTLIGDCATVH-------T 166 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHH-SCTTCEEEEEESSCCBC---------SS----SEEEESCGGGEE-------E
T ss_pred cCCCEEEeCCCCCCCCCCCcHHHHHHh-CCCCcEEEEeeCccccc---------CC----CeEEEccccccc-------c
Confidence 46899999996 5665322111 222 3899999987431 11 245999974422 2
Q ss_pred CCceeEEEeccchhhh--c-----CCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 103 ANQADLVCCFQHLQMC--F-----ETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~--~-----~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
.++||+|++-++-.-. . ....-.+.+++-+.+.|+|||.|++-+..+.
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 5789999997643211 0 1122466778888899999999999866553
No 303
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.32 E-value=0.011 Score=49.65 Aligned_cols=113 Identities=10% Similarity=-0.014 Sum_probs=79.4
Q ss_pred CeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcC--CCceEEEEEcCCCCCchhhhhccc---CCcee
Q 025754 33 VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR--KNFIAEFFEADPCAENFETQMQEK---ANQAD 107 (248)
Q Consensus 33 ~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~---~~~fD 107 (248)
.-|++||||-=.-...+.......++-+| .|..++..++.+...+ ...+..++.+|+.+ .....+... ....-
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 56999999875433333211224889999 6999998888886422 13457899999988 443333211 23456
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
++++..+++| .+.+....+++.+...+.||+.+++...+.
T Consensus 182 ~~i~Egvl~Y--l~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 182 AWLAEGLLMY--LPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp EEEECSCGGG--SCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred EEEEechHhh--CCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 7788888998 567789999999999999999999985443
No 304
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.74 E-value=0.0053 Score=52.54 Aligned_cols=59 Identities=17% Similarity=0.188 Sum_probs=48.8
Q ss_pred CCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCc
Q 025754 32 YVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN 94 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (248)
+..|||||.|.|.++..++.. ..++|+++++++..+...+... .. .++.++++|+...+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~---~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG---SPLQILKRDPYDWS 118 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT---SSCEEECSCTTCHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC---CCEEEEECCccchh
Confidence 589999999999999999875 4568999999999998887766 22 24899999996643
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.44 E-value=0.0045 Score=53.52 Aligned_cols=75 Identities=15% Similarity=0.076 Sum_probs=55.1
Q ss_pred CeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhc--ccCCceeEEE
Q 025754 33 VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ--EKANQADLVC 110 (248)
Q Consensus 33 ~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~fD~V~ 110 (248)
.+|+||.||.|++...+...+...+.++|+++.+++..+..+.. ..++++|+.+........ .....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~------~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPR------SLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTT------SEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCC------CceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 58999999999999999888887788999999988776655432 567889987654322110 0245799998
Q ss_pred ecc
Q 025754 111 CFQ 113 (248)
Q Consensus 111 ~~~ 113 (248)
...
T Consensus 77 ggp 79 (376)
T 3g7u_A 77 GGP 79 (376)
T ss_dssp ECC
T ss_pred ecC
Confidence 654
No 306
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.38 E-value=0.005 Score=52.05 Aligned_cols=54 Identities=13% Similarity=0.203 Sum_probs=45.1
Q ss_pred HHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHh
Q 025754 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWEN 76 (248)
Q Consensus 22 ~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~ 76 (248)
..+|..+..++..|||.-||+|..+......+. +.+|+|+++..++.+++|+..
T Consensus 243 ~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 243 EFFIRMLTEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHh
Confidence 355666778999999999999987777666564 999999999999999988754
No 307
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.27 E-value=0.0075 Score=50.91 Aligned_cols=55 Identities=25% Similarity=0.252 Sum_probs=44.9
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCCh---HHHHHHHHHHHh
Q 025754 21 KTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVAT---SGIGEARDTWEN 76 (248)
Q Consensus 21 ~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~---~~l~~a~~~~~~ 76 (248)
-..+|..+..++..|||.-||+|..+......+. +++|+|+++ ..++.+++|+..
T Consensus 232 ~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 232 IERLVRALSHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHH
Confidence 3456677788999999999999988777766665 899999999 999999988754
No 308
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.21 E-value=0.05 Score=44.35 Aligned_cols=118 Identities=14% Similarity=0.099 Sum_probs=72.4
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHc--------CCCeEEEEe-----CChH----------------------HH
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETA--------LIANYIGID-----VATS----------------------GI 67 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~--------~~~~v~giD-----is~~----------------------~l 67 (248)
.|.+....-...|+|+||-.|+.+..++.. ...+++|+| ..+. .+
T Consensus 61 ~l~~~i~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l 140 (257)
T 3tos_A 61 ALYRQVLDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYL 140 (257)
T ss_dssp HHHHHTTTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHH
T ss_pred HHHHHhhCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHH
Confidence 344444455568999999999988776542 236899999 3321 11
Q ss_pred HHHHHHHH---hcCC-CceEEEEEcCCCCCchhhhhcc-cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEE
Q 025754 68 GEARDTWE---NQRK-NFIAEFFEADPCAENFETQMQE-KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYF 142 (248)
Q Consensus 68 ~~a~~~~~---~~~~-~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~ 142 (248)
+...+..+ ..+. ..++.++.+++.+. +...+.. +..++|+|..-... -+.....++.+...|+|||++
T Consensus 141 ~~~l~~~~~~~~~g~~~~~i~li~G~~~dT-L~~~l~~~~~~~~dlv~ID~D~------Y~~t~~~le~~~p~l~~GGvI 213 (257)
T 3tos_A 141 KEVLDAHECSDFFGHVTQRSVLVEGDVRET-VPRYLAENPQTVIALAYFDLDL------YEPTKAVLEAIRPYLTKGSIV 213 (257)
T ss_dssp HHHHHHHHTTSTTTTSCCSEEEEESCHHHH-HHHHHHHCTTCCEEEEEECCCC------HHHHHHHHHHHGGGEEEEEEE
T ss_pred HHHHHHHhhhhhcCCCCCcEEEEEecHHHH-HHHHHHhCCCCceEEEEEcCcc------cchHHHHHHHHHHHhCCCcEE
Confidence 11111111 1121 24689999997432 2111111 34579999876632 334567888999999999999
Q ss_pred EEEec
Q 025754 143 LGITP 147 (248)
Q Consensus 143 i~~~~ 147 (248)
++.-.
T Consensus 214 v~DD~ 218 (257)
T 3tos_A 214 AFDEL 218 (257)
T ss_dssp EESST
T ss_pred EEcCC
Confidence 99843
No 309
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.16 E-value=0.0028 Score=54.08 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=53.9
Q ss_pred CCeEEEEcCCCCccHhHHHHcC--CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 32 YVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~~--~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
..+|+|+.||.|+....+...+ ...+.++|+++.+++..+..+.. ..++++|+.+..... + ....+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~-~--~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEE-F--DRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHH-H--HHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhH-c--CcCCcCEE
Confidence 3579999999999999888877 45799999999999888776543 346788886643211 1 11258999
Q ss_pred Eecc
Q 025754 110 CCFQ 113 (248)
Q Consensus 110 ~~~~ 113 (248)
+...
T Consensus 73 ~~gp 76 (343)
T 1g55_A 73 LMSP 76 (343)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8765
No 310
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.06 E-value=0.011 Score=50.01 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
.+.+|+|+.||.|+....+...+...+.++|+++.+++..+..+... .++|+.+.... .-..+|+|+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~--------~~~Di~~~~~~-----~~~~~D~l~ 76 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK--------PEGDITQVNEK-----TIPDHDILC 76 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC--------CBSCGGGSCGG-----GSCCCSEEE
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC--------CcCCHHHcCHh-----hCCCCCEEE
Confidence 35789999999999999998888878999999999988777665431 15777553321 123589998
Q ss_pred ecc
Q 025754 111 CFQ 113 (248)
Q Consensus 111 ~~~ 113 (248)
...
T Consensus 77 ~gp 79 (327)
T 2c7p_A 77 AGF 79 (327)
T ss_dssp EEC
T ss_pred ECC
Confidence 753
No 311
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.76 E-value=0.0039 Score=51.50 Aligned_cols=109 Identities=6% Similarity=-0.070 Sum_probs=73.9
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
.+..+||+-+|+|.......+.. .+++.+|.++..++.-++..... .++.+++.|... ....+..+..+||+|+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~---~~~~V~~~D~~~--~L~~l~~~~~~fdLVf 164 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFN---KKVYVNHTDGVS--KLNALLPPPEKRGLIF 164 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTT---SCEEEECSCHHH--HHHHHCSCTTSCEEEE
T ss_pred cCCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcC---CcEEEEeCcHHH--HHHHhcCCCCCccEEE
Confidence 35668999999999888887744 69999999999988776655432 358888888633 1111212345799998
Q ss_pred eccchhhhcCCHHHHHHHHHHHhc--cccCCcEEEEEecCh
Q 025754 111 CFQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPDS 149 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~--~LkpgG~~i~~~~~~ 149 (248)
+--... ..+....+++.+.+ .+.|+|++++..|--
T Consensus 165 iDPPYe----~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 165 IDPSYE----RKEEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp ECCCCC----STTHHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred ECCCCC----CCcHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 754222 12345566665555 446999999996633
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.46 E-value=0.042 Score=47.03 Aligned_cols=98 Identities=12% Similarity=0.076 Sum_probs=62.7
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCc
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (248)
+.++.+||-+|||. |..+..+++. +...|+++|.+++.++.+++.-. ...+. ..+.++.+.+.+ ..+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~--~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-------THVIN--SKTQDPVAAIKEITDGG 258 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-------SEEEE--TTTSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-------CEEec--CCccCHHHHHHHhcCCC
Confidence 45889999999886 6666666654 55579999999998888764311 11222 222233222211 1237
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+..... ...++...+.|+++|.++..
T Consensus 259 ~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 259 VNFALESTGS----------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEEEEECSCC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred CcEEEECCCC----------HHHHHHHHHHHhcCCEEEEe
Confidence 9999754421 23567778899999998876
No 313
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.43 E-value=0.04 Score=45.90 Aligned_cols=75 Identities=17% Similarity=0.127 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCCCe--EEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALIAN--YIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~~~--v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
...+|+|+-||.|+....+...+... +.++|+++.+++.-+..+.. ..++.+|+.+..... ++ ..+.+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~------~~~~~~DI~~i~~~~-i~-~~~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQG------KIMYVGDVRSVTQKH-IQ-EWGPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTT------CEEEECCGGGCCHHH-HH-HTCCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCC------CceeCCChHHccHHH-hc-ccCCcCE
Confidence 45689999999999998888888755 69999999988765544432 357789987654321 11 1246899
Q ss_pred EEecc
Q 025754 109 VCCFQ 113 (248)
Q Consensus 109 V~~~~ 113 (248)
++...
T Consensus 87 l~ggp 91 (295)
T 2qrv_A 87 VIGGS 91 (295)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98754
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.32 E-value=0.037 Score=46.74 Aligned_cols=98 Identities=13% Similarity=0.092 Sum_probs=62.3
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
..++.+||-+|+|. |..+..+++....+|+++|.+++.++.+++. +. ...+ |..+.++.+.+....+.+|
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga---~~~i--~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL----GA---EVAV--NARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TC---SEEE--ETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc----CC---CEEE--eCCCcCHHHHHHHhCCCCC
Confidence 45899999999975 6666666665334999999999988877653 10 1122 2223333332222234789
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+.... . ...++.+.+.|+++|.++..
T Consensus 235 ~vid~~g------~----~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 235 GVLVTAV------S----PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEESSC------C----HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEEeCC------C----HHHHHHHHHHhccCCEEEEe
Confidence 8865331 1 23566777889999999876
No 315
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.28 E-value=0.029 Score=47.23 Aligned_cols=69 Identities=13% Similarity=0.039 Sum_probs=52.1
Q ss_pred CeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEec
Q 025754 33 VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCF 112 (248)
Q Consensus 33 ~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~ 112 (248)
.+|+||-||.|++...+...++.-+.++|+++.+++.-+..+. ..++.+|+.+.... .-...|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~-----~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSD-----EFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGG-----GSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHh-----hCCcccEEEec
Confidence 4799999999999999988888778899999998876554432 35678998765432 12468998764
Q ss_pred c
Q 025754 113 Q 113 (248)
Q Consensus 113 ~ 113 (248)
.
T Consensus 69 p 69 (331)
T 3ubt_Y 69 P 69 (331)
T ss_dssp C
T ss_pred C
Confidence 4
No 316
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.02 E-value=0.036 Score=46.90 Aligned_cols=73 Identities=11% Similarity=0.106 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCC--CeE-EEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALI--ANY-IGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~--~~v-~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
...+++|+.||.|+....+...+. ..+ .++|+++.+++.-+..+.. . .+++|+.+..... + +...+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~------~-~~~~DI~~~~~~~-i--~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE------E-VQVKNLDSISIKQ-I--ESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC------C-CBCCCTTTCCHHH-H--HHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC------C-cccCChhhcCHHH-h--ccCCCC
Confidence 456899999999999999888774 567 7999999988776665532 1 5678887765432 2 123689
Q ss_pred EEEecc
Q 025754 108 LVCCFQ 113 (248)
Q Consensus 108 ~V~~~~ 113 (248)
+++...
T Consensus 79 il~ggp 84 (327)
T 3qv2_A 79 TWFMSP 84 (327)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 998654
No 317
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.98 E-value=0.27 Score=35.61 Aligned_cols=102 Identities=10% Similarity=0.017 Sum_probs=63.0
Q ss_pred CCeEEEEcCCC-CccHhHHH-HcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 32 YVTVCDLYCGA-GVDVDKWE-TALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~~l~-~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
..+|+=+|||. |..+...+ ..+. .|+++|.+++.++.++. .+ +..+.+|..+....... .-..+|+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~g----~~~i~gd~~~~~~l~~a--~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----RG----VRAVLGNAANEEIMQLA--HLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT----CEEEESCTTSHHHHHHT--TGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----cC----CCEEECCCCCHHHHHhc--CcccCCEE
Confidence 35789999986 54443333 3355 89999999998877653 23 66789998775543221 12468888
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhH
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 151 (248)
++.. .+..... .+-...+.+.|+..++....+...
T Consensus 76 i~~~------~~~~~n~-~~~~~a~~~~~~~~iiar~~~~~~ 110 (140)
T 3fwz_A 76 ILTI------PNGYEAG-EIVASARAKNPDIEIIARAHYDDE 110 (140)
T ss_dssp EECC------SCHHHHH-HHHHHHHHHCSSSEEEEEESSHHH
T ss_pred EEEC------CChHHHH-HHHHHHHHHCCCCeEEEEECCHHH
Confidence 6543 2222222 233355667888887776665543
No 318
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.93 E-value=0.031 Score=47.40 Aligned_cols=72 Identities=13% Similarity=0.192 Sum_probs=51.7
Q ss_pred CeEEEEcCCCCccHhHHHHcCC--CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 33 VTVCDLYCGAGVDVDKWETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 33 ~~VLDlGcG~G~~~~~l~~~~~--~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
.+++|+.||.|+....+...+. ..+.++|+++.+++.-+..+.. ..+++.|+.+..... + +...+|+++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~-~--~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQV-I--KKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHH-H--HHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHH-h--ccCCCCEEE
Confidence 4799999999999988877775 5688999999988766655543 336778886654322 1 123689998
Q ss_pred ecc
Q 025754 111 CFQ 113 (248)
Q Consensus 111 ~~~ 113 (248)
...
T Consensus 75 ggp 77 (333)
T 4h0n_A 75 MSP 77 (333)
T ss_dssp ECC
T ss_pred ecC
Confidence 643
No 319
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=94.68 E-value=1.7 Score=36.62 Aligned_cols=190 Identities=13% Similarity=0.092 Sum_probs=107.0
Q ss_pred ccchhhhhHhHHHHHHHHHhc-------CCCCeEEEEcCCCCccHhHHHHcC--CCeEEEEeCChHHHHHHHHHHHhcC-
Q 025754 9 SELTHHRLYEFAKTALIKIYS-------HPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQR- 78 (248)
Q Consensus 9 ~~~~~~~~~~~~~~~li~~~~-------~~~~~VLDlGcG~G~~~~~l~~~~--~~~v~giDis~~~l~~a~~~~~~~~- 78 (248)
++.|...---|++...++..+ ++...|+-||||-=.....+...+ ...++=+|. |+.++.-++.+...+
T Consensus 61 rr~P~inrG~~~Rt~~iD~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~ 139 (334)
T 3iei_A 61 RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPP 139 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchh
Confidence 456654433566665555443 246789999998865555554432 235666665 444443333333200
Q ss_pred ---------------------CCceEEEEEcCCCCCc-hhhhhcc---cCCceeEEEeccchhhhcCCHHHHHHHHHHHh
Q 025754 79 ---------------------KNFIAEFFEADPCAEN-FETQMQE---KANQADLVCCFQHLQMCFETEERARRLLQNVS 133 (248)
Q Consensus 79 ---------------------~~~~~~~~~~d~~~~~-~~~~~~~---~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~ 133 (248)
...+..++.+|+.+.. +...+.. .....-++++-.++.| .+.+....+++.+.
T Consensus 140 l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~Y--L~~~~~~~ll~~ia 217 (334)
T 3iei_A 140 LSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVY--MTPEQSANLLKWAA 217 (334)
T ss_dssp HHHHHHHHSSSSSCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGG--SCHHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhC--CCHHHHHHHHHHHH
Confidence 0234788999997742 2222211 2344567888888888 67888999999999
Q ss_pred ccccCCcEEEEEecCh-hHHHHHHHHhHhhhhCCCCCCCCCCCCCcccCceeEEEecccCCCCCcceeeeEEEEccCccC
Q 025754 134 SLLKPGGYFLGITPDS-STIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISA 212 (248)
Q Consensus 134 ~~LkpgG~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~y~~~l~~~~~~ 212 (248)
+...+|..++....+. +...+.+.+++. ..| . |..+ .
T Consensus 218 ~~f~~~~~i~yE~i~p~d~fg~~M~~~l~---~~g---------~------------------pl~s----------l-- 255 (334)
T 3iei_A 218 NSFERAMFINYEQVNMGDRFGQIMIENLR---RRQ---------C------------------DLAG----------V-- 255 (334)
T ss_dssp HHCSSEEEEEEEECCTTSHHHHHHHHHHH---TTT---------C------------------CCTT----------G--
T ss_pred HhCCCceEEEEeccCCCCHHHHHHHHHHH---HhC---------C------------------CCcc----------c--
Confidence 8775554444433222 333333333221 111 0 0001 0
Q ss_pred CCcceechHHHHHHHHHcCcEEEEecCchHHHh
Q 025754 213 ETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYD 245 (248)
Q Consensus 213 ~~e~lv~~~~l~~~~~~~G~~~v~~~~f~~~~~ 245 (248)
....+.+...+.+.++||+.+...+..++|+
T Consensus 256 --~~y~t~~~~~~r~~~~Gw~~~~~~d~~~~~~ 286 (334)
T 3iei_A 256 --ETCKSLESQKERLLSNGWETASAVDMMELYN 286 (334)
T ss_dssp --GGGGCHHHHHHHHHTTTCSEEEEEEHHHHHH
T ss_pred --ccCCCHHHHHHHHHHcCCCcceeecHHHHHH
Confidence 0123567778888999999888887777763
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.49 E-value=0.17 Score=42.95 Aligned_cols=101 Identities=13% Similarity=0.023 Sum_probs=63.5
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcC-CCCCchhhhhcc--cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEAD-PCAENFETQMQE--KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~--~~ 103 (248)
+.++.+||=+|+|. |..+..+++. +...|+++|.+++-++.+++. ...- +.+ ..+ ....++.+.+.. ..
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~----~~~-~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEV----VTH-KVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTC----EEE-ECCSCCHHHHHHHHHHHTSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhc----ccc-cccccchHHHHHHHHHHhCC
Confidence 56899999999875 6666666655 554599999999999988865 2211 222 222 111222222221 13
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+.... . ...++.+.+.|++||.++..
T Consensus 251 ~g~Dvvid~~g------~----~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 251 IEPAVALECTG------V----ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CCCSEEEECSC------C----HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEECCC------C----hHHHHHHHHHhcCCCEEEEE
Confidence 47999976432 1 12466677899999999876
No 321
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.03 E-value=0.13 Score=44.83 Aligned_cols=61 Identities=5% Similarity=-0.056 Sum_probs=46.2
Q ss_pred CCCCeEEEEcCCCCccHhHHH-Hc-C-CCeEEEEeCChHHHHHHHHHHHh--cCCC-ceEEEEEcCC
Q 025754 30 HPYVTVCDLYCGAGVDVDKWE-TA-L-IANYIGIDVATSGIGEARDTWEN--QRKN-FIAEFFEADP 90 (248)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~l~-~~-~-~~~v~giDis~~~l~~a~~~~~~--~~~~-~~~~~~~~d~ 90 (248)
+++..|+|+|++.|..+..++ .. + .++|++++++|...+..++.... ++.. .++..+.+.+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 478899999999999988877 33 2 36999999999999998887765 2112 3466666554
No 322
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.01 E-value=0.097 Score=44.37 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=62.0
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||=+|+|. |..+..++.. +..+|+++|.+++-++.+++.-. ...+ |..+.++.+.+.+ ...
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi--~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA-------TDII--NYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC-------CEEE--CGGGSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC-------ceEE--cCCCcCHHHHHHHHcCCC
Confidence 45899999999875 6666666665 44489999999988887765321 1122 2222333322221 123
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+....- ...++.+.+.|+|||.++..
T Consensus 235 g~D~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVIAGGD----------VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CEEEEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCC----------hHHHHHHHHHHhcCCEEEEe
Confidence 69999754321 13466677899999999865
No 323
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.86 E-value=0.2 Score=42.77 Aligned_cols=98 Identities=16% Similarity=0.088 Sum_probs=63.0
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc----c
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE----K 102 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~ 102 (248)
+.++.+||=+|+|. |..+..++.. +...|+++|.++.-++.+++.-. ... .|..+.++.+.+.+ .
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~v--i~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA-------TAT--VDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC-------SEE--ECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-------CEE--ECCCCcCHHHHHHhhhhcc
Confidence 56899999999875 6556666654 55589999999998887765311 111 23333333332221 2
Q ss_pred CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+.+|+|+-... . ...++.+.+.|++||.++..
T Consensus 251 ~gg~Dvvid~~G------~----~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIECAG------V----AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEECSC------C----HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCC------C----HHHHHHHHHHhccCCEEEEE
Confidence 347999975432 1 23566777899999999876
No 324
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.69 E-value=0.062 Score=41.43 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=58.2
Q ss_pred cCCCCeEEEEcCC--CCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cC
Q 025754 29 SHPYVTVCDLYCG--AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (248)
+.++.+||-.|++ .|..+..++.. +. +|+++|.+++.++.+++ .+ ... ..|..+.+..+.+.. ..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g----~~~-~~d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LG----VEY-VGDSRSVDFADEILELTDG 105 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TC----CSE-EEETTCSTHHHHHHHHTTT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cC----CCE-EeeCCcHHHHHHHHHHhCC
Confidence 4578999999953 35545444443 54 89999999887766543 12 111 124433333222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+..... ..++.+.+.|+|||.++..
T Consensus 106 ~~~D~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 106 YGVDVVLNSLAG-----------EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CCEEEEEECCCT-----------HHHHHHHHTEEEEEEEEEC
T ss_pred CCCeEEEECCch-----------HHHHHHHHHhccCCEEEEE
Confidence 469999765421 2467778899999998875
No 325
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.63 E-value=0.29 Score=41.16 Aligned_cols=99 Identities=17% Similarity=0.208 Sum_probs=61.3
Q ss_pred hcCCCCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
-+.++.+||-+|+|. |..+..++...-.+|+++|.+++-++.+++. + +. ...|..+.++.+.+....+.+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~~d~~~~~~~~~~~~~~~~~ 231 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL----G----AD-LVVNPLKEDAAKFMKEKVGGV 231 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----T----CS-EEECTTTSCHHHHHHHHHSSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC----C----CC-EEecCCCccHHHHHHHHhCCC
Confidence 356889999999964 5555555554334999999999888877531 2 11 123444333332221111579
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|+..... ...++...+.|+++|.++..
T Consensus 232 d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 232 HAAVVTAVS----------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC----------HHHHHHHHHHhhcCCEEEEe
Confidence 999764421 12456677889999998865
No 326
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=93.56 E-value=0.63 Score=38.80 Aligned_cols=120 Identities=13% Similarity=0.134 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCCCccHhH-HH---H-cCCC--eEEEEeCCh--------HHHHH-HHHHHHh----cCCCceEEEEEcCC
Q 025754 31 PYVTVCDLYCGAGVDVDK-WE---T-ALIA--NYIGIDVAT--------SGIGE-ARDTWEN----QRKNFIAEFFEADP 90 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~-l~---~-~~~~--~v~giDis~--------~~l~~-a~~~~~~----~~~~~~~~~~~~d~ 90 (248)
+..+|||+|-|||..... |. + .+.. +++.+|-.+ ..... ....... ........+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 456899999999976532 21 1 1222 456666422 11121 1111111 11123456777886
Q ss_pred CCCchhhhhcc-cCCceeEEEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHHH
Q 025754 91 CAENFETQMQE-KANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQK 158 (248)
Q Consensus 91 ~~~~~~~~~~~-~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~ 158 (248)
.+ .++. ...++|+|+.-. +... .+.-...++++.+.++++|||++. |...+..+++.+.+
T Consensus 176 ~~-----~l~~l~~~~~Da~flDgFsP~k--NPeLWs~e~f~~l~~~~~pgg~la-TYtaag~VRR~L~~ 237 (308)
T 3vyw_A 176 RK-----RIKEVENFKADAVFHDAFSPYK--NPELWTLDFLSLIKERIDEKGYWV-SYSSSLSVRKSLLT 237 (308)
T ss_dssp HH-----HGGGCCSCCEEEEEECCSCTTT--SGGGGSHHHHHHHHTTEEEEEEEE-ESCCCHHHHHHHHH
T ss_pred HH-----HHhhhcccceeEEEeCCCCccc--CcccCCHHHHHHHHHHhCCCcEEE-EEeCcHHHHHHHHH
Confidence 33 1221 235799997643 2211 111124689999999999999886 55556666666654
No 327
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.16 E-value=0.11 Score=44.99 Aligned_cols=106 Identities=14% Similarity=0.001 Sum_probs=63.0
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCch-hhhhcc--cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQMQE--KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~--~~ 103 (248)
+.++.+||-+|||. |..+..++.. +..+|+++|.+++.++.+++ .+ +..+ |..+.++ .+.+.. ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG----a~~i--~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG----FETI--DLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT----CEEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC----CcEE--cCCCcchHHHHHHHHhCC
Confidence 45899999999976 7666666654 55589999999998877653 22 2223 2222222 222211 12
Q ss_pred CceeEEEeccchhhhcCCHH-----HHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEE-----RARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~-----~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+-...-... .... .....++.+.+.|++||.++..
T Consensus 253 ~g~Dvvid~~g~~~~-~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 253 PEVDCGVDAVGFEAH-GLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SCEEEEEECSCTTCB-CSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCEEEECCCCccc-cccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 369999764432110 0000 0113467778899999998765
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.00 E-value=0.23 Score=42.40 Aligned_cols=95 Identities=16% Similarity=0.104 Sum_probs=59.9
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
+.++.+||-+|+|. |..+..++.....+|+++|.+++.++.+++. +. ...+ |..+.+....+ .+.+|
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l--Ga-----~~vi--~~~~~~~~~~~---~~g~D 259 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL--GA-----DEVV--NSRNADEMAAH---LKSFD 259 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--TC-----SEEE--ETTCHHHHHTT---TTCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--CC-----cEEe--ccccHHHHHHh---hcCCC
Confidence 56899999999875 6666666655333799999999988887652 11 1122 22222221111 25799
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+...... ..++...+.|+++|.++..
T Consensus 260 vvid~~g~~----------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 260 FILNTVAAP----------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEECCSSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCCH----------HHHHHHHHHhccCCEEEEe
Confidence 997644221 1355677899999998875
No 329
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.94 E-value=0.14 Score=43.43 Aligned_cols=100 Identities=10% Similarity=0.060 Sum_probs=60.6
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCC-CCchhhhhcc-cCC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE-KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~-~~~ 104 (248)
+.++.+||-+|+|. |..+..++.. +..+|+++|.++.-++.+++. +. ...+..+-. ..++...+.. ...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga---~~vi~~~~~~~~~~~~~i~~~~~~ 241 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----GA---DLVLQISKESPQEIARKVEGQLGC 241 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TC---SEEEECSSCCHHHHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CC---CEEEcCcccccchHHHHHHHHhCC
Confidence 45899999999875 6666666654 445899999999888777642 21 112221100 1122211111 125
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+.... . ...++...++|++||.++..
T Consensus 242 g~D~vid~~g------~----~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 242 KPEVTIECTG------A----EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CCSEEEECSC------C----HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCC------C----hHHHHHHHHHhcCCCEEEEE
Confidence 6999975432 1 12456677899999999876
No 330
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.84 E-value=0.2 Score=41.99 Aligned_cols=97 Identities=13% Similarity=-0.010 Sum_probs=59.8
Q ss_pred cCCCCeEEEEcCC--CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC-Cchhhhhcc-cCC
Q 025754 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQE-KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~-~~~ 104 (248)
+.++.+||-.||+ .|..+..++.....+|+++|.+++.++.+++ . + .. ...|..+ .++...+.. ..+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~---g----~~-~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-I---G----FD-AAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---T----CS-EEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-c---C----Cc-EEEecCCHHHHHHHHHHHhCC
Confidence 4578999999983 4555555544433389999999988877732 2 1 11 1224433 333322211 125
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+..... ..+....+.|++||.++..
T Consensus 214 ~~d~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 214 GYDCYFDNVGG-----------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CEEEEEESSCH-----------HHHHHHHTTEEEEEEEEEC
T ss_pred CCeEEEECCCh-----------HHHHHHHHHHhcCCEEEEE
Confidence 79999765531 1366778899999998865
No 331
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.78 E-value=0.2 Score=42.40 Aligned_cols=98 Identities=11% Similarity=0.041 Sum_probs=59.6
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC-Cchhhhhcc--c--
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQE--K-- 102 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~--~-- 102 (248)
+.++.+||-+|+|. |..+..++...-.+|+++|.+++.++.+++. +. ...+. ..+ .++.+.+.. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga---~~~~~--~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC----GA---DVTLV--VDPAKEEESSIIERIRSA 236 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TC---SEEEE--CCTTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh----CC---CEEEc--CcccccHHHHHHHHhccc
Confidence 45899999999875 6556666654333699999999988877642 21 11222 121 222222211 1
Q ss_pred -CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 103 -ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 -~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
...+|+|+..... ...++...+.|+++|.++..
T Consensus 237 ~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 237 IGDLPNVTIDCSGN----------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp SSSCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred cCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 2469999764421 12456677889999999876
No 332
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.75 E-value=0.78 Score=39.53 Aligned_cols=102 Identities=14% Similarity=-0.001 Sum_probs=61.5
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||=+|+|. |..+..++.. +..+|+++|.++.-++.+++.-. ...+ |..+.++.+.+.+ ...
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi--~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA-------DHVI--DPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC-------SEEE--CTTTSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-------CEEE--cCCCCCHHHHHHHHhCCC
Confidence 45889999999875 5555566554 55589999999998888865421 1122 3333333332222 123
Q ss_pred ceeEEEeccchhhhcCCH-HHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETE-ERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~-~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+-... .. .....+++.+.+.++++|.++..
T Consensus 282 g~D~vid~~g------~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 282 GAKLFLEATG------VPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CCSEEEECSS------CHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCCEEEECCC------CcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 6999975432 22 12334444444666999999876
No 333
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.55 E-value=0.29 Score=40.91 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=60.6
Q ss_pred cCCCCeEEEEc-CC-CCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cC
Q 025754 29 SHPYVTVCDLY-CG-AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (248)
Q Consensus 29 ~~~~~~VLDlG-cG-~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (248)
+.++.+||=.| +| .|..+..++.. +. +|+++|.+++-++.+++.- . ...+ |..+.++.+.+.+ ..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~G--a-----~~~~--~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALG--A-----WETI--DYSHEDVAKRVLELTDG 207 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHT--C-----SEEE--ETTTSCHHHHHHHHTTT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC--C-----CEEE--eCCCccHHHHHHHHhCC
Confidence 35789999998 44 36555555554 55 8999999999888776431 1 1122 2233333322221 22
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+..... ..+....+.|+++|.++..
T Consensus 208 ~g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 208 KKCPVVYDGVGQ-----------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp CCEEEEEESSCG-----------GGHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEECCCh-----------HHHHHHHHHhcCCCEEEEE
Confidence 479999765432 2456678899999999876
No 334
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.41 E-value=0.69 Score=40.24 Aligned_cols=102 Identities=13% Similarity=0.050 Sum_probs=65.7
Q ss_pred CCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
+.+|+=+|+|. |..+...+......|+++|.+++.++.++. .+ +..+.+|+++....... .-...|+|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~a--gi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESA--GAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHT--TTTTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhc--CCCccCEEE
Confidence 45788899886 544444433333389999999999887763 22 55789999886654322 235788886
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+.. .+. .....+....+.+.|+..++....+..
T Consensus 74 v~~------~~~-~~n~~i~~~ar~~~p~~~Iiara~~~~ 106 (413)
T 3l9w_A 74 NAI------DDP-QTNLQLTEMVKEHFPHLQIIARARDVD 106 (413)
T ss_dssp ECC------SSH-HHHHHHHHHHHHHCTTCEEEEEESSHH
T ss_pred ECC------CCh-HHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 643 223 334445556667788888877755543
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.30 E-value=0.22 Score=41.87 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=59.3
Q ss_pred cCCCCeEEEEcCCC--CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cC
Q 025754 29 SHPYVTVCDLYCGA--GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~--G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (248)
+.++.+||-+|+|. |..+..++.. +. +|+++|.+++.++.+++. +. ...+ |..+.++.+.+.. ..
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l--ga-----~~~~--~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL--GA-----AYVI--DTSTAPLYETVMELTNG 211 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH--TC-----SEEE--ETTTSCHHHHHHHHTTT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC--CC-----cEEE--eCCcccHHHHHHHHhCC
Confidence 45889999999984 5555555554 55 899999999988887753 11 1122 2333333322221 13
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+...... .. ....+.|+++|.++..
T Consensus 212 ~g~Dvvid~~g~~-------~~----~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 212 IGADAAIDSIGGP-------DG----NELAFSLRPNGHFLTI 242 (340)
T ss_dssp SCEEEEEESSCHH-------HH----HHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECCCCh-------hH----HHHHHHhcCCCEEEEE
Confidence 4799997644221 12 2233789999999876
No 336
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.18 E-value=0.33 Score=40.92 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=60.2
Q ss_pred CCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCCce
Q 025754 31 PYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (248)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~f 106 (248)
++.+||-+|+|. |..+..++.. +..+|+++|.+++-++.+++. + +.. ..|..+.++.+.+.+ ....+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----G----a~~-~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----G----ADY-VINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----T----CSE-EECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----C----CCE-EECCCCcCHHHHHHHHcCCCCC
Confidence 788999999964 5555566554 444899999999888777642 1 111 123333333332221 12369
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|+..... ...++.+.+.|+++|.++..
T Consensus 238 D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 238 DVFLEFSGA----------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 999764421 13456677889999998875
No 337
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.12 E-value=0.27 Score=41.78 Aligned_cols=97 Identities=13% Similarity=-0.042 Sum_probs=60.7
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCCc
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~ 105 (248)
+.++.+||=+|+|. |..+..+++....+|+++|.+++-++.+++.-. ...+.. ...++.+.+.. ....
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-------~~vi~~--~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA-------DHGINR--LEEDWVERVYALTGDRG 257 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC-------SEEEET--TTSCHHHHHHHHHTTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC-------CEEEcC--CcccHHHHHHHHhCCCC
Confidence 45889999999875 665666665533499999999998887765311 112221 11233222211 2347
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+....- ..+..+.+.|+++|.++..
T Consensus 258 ~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 258 ADHILEIAGG-----------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEEEEETTS-----------SCHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCCh-----------HHHHHHHHHhhcCCEEEEE
Confidence 9999765431 1355667789999999876
No 338
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.09 E-value=0.25 Score=41.70 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=60.1
Q ss_pred cCCCCeEEEEcCCC--CccHhHHHHcC-CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cC-
Q 025754 29 SHPYVTVCDLYCGA--GVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KA- 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~--G~~~~~l~~~~-~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~- 103 (248)
+.++.+||-.|+|. |..+..++... -.+|+++|.+++.++.+++. .. ...+ |..+.+....+.. ..
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~--g~-----~~~~--~~~~~~~~~~~~~~~~~ 238 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA--GA-----DYVI--NASMQDPLAEIRRITES 238 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH--TC-----SEEE--ETTTSCHHHHHHHHTTT
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh--CC-----CEEe--cCCCccHHHHHHHHhcC
Confidence 45889999999984 44444444432 34899999999888877542 11 1122 2323333211111 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+.+|+|+..... ...++.+.+.|+++|.++..
T Consensus 239 ~~~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 239 KGVDAVIDLNNS----------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp SCEEEEEESCCC----------HHHHTTGGGGEEEEEEEEEC
T ss_pred CCceEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 579999765421 23567788899999998875
No 339
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.01 E-value=0.36 Score=40.58 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=60.4
Q ss_pred cCCCCeEEEEcC--CCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYC--GAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGc--G~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||-.|+ |.|..+..++.....+|+++|.+++.++.+++. +. ... .|..+.++.+.+.. ...
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~--ga-----~~~--~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL--GA-----DET--VNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--TC-----SEE--EETTSTTHHHHHHHHTTTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--CC-----CEE--EcCCcccHHHHHHHHhCCC
Confidence 347899999998 346555555554334899999999988877542 11 111 23333333222221 124
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+.... . ..++.+.+.|+++|.++..
T Consensus 235 ~~d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 235 GADKVVDHTG-A----------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp CEEEEEESSC-S----------SSHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC-H----------HHHHHHHHhhccCCEEEEE
Confidence 7999977654 1 1356667788999998865
No 340
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.95 E-value=0.53 Score=40.01 Aligned_cols=95 Identities=12% Similarity=0.106 Sum_probs=60.7
Q ss_pred CCCeEEEEc-CCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCce
Q 025754 31 PYVTVCDLY-CGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (248)
Q Consensus 31 ~~~~VLDlG-cG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~f 106 (248)
++.+||=+| +|. |..+..+++. ...+|+++|.+++-++.+++. +. ...+ |..+ ++.+.+.+ ..+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----Ga---d~vi--~~~~-~~~~~v~~~~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----GA---HHVI--DHSK-PLAAEVAALGLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----TC---SEEE--CTTS-CHHHHHHTTCSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----CC---CEEE--eCCC-CHHHHHHHhcCCCc
Confidence 678899998 664 7777777765 456999999999888877642 21 1122 2222 23222221 23579
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|+.... ....++.+.++|+++|.++..
T Consensus 241 Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred eEEEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 99875332 123567778899999999875
No 341
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.70 E-value=1.3 Score=31.70 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=58.3
Q ss_pred CCeEEEEcCCC-CccHh-HHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 32 YVTVCDLYCGA-GVDVD-KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~-~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
..+|+=+|||. |..+. .+...+. +|+++|.+++.++.++. .+ ..++.+|..+....... ....+|+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~~l~~~--~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLED----EG----FDAVIADPTDESFYRSL--DLEGVSAV 74 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT----CEEEECCTTCHHHHHHS--CCTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH----CC----CcEEECCCCCHHHHHhC--CcccCCEE
Confidence 45789999975 33332 3333455 89999999988776653 22 56788998775543222 23468988
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
++... +.+ ....+....+.+. ...++....+..
T Consensus 75 i~~~~------~~~-~n~~~~~~a~~~~-~~~iia~~~~~~ 107 (141)
T 3llv_A 75 LITGS------DDE-FNLKILKALRSVS-DVYAIVRVSSPK 107 (141)
T ss_dssp EECCS------CHH-HHHHHHHHHHHHC-CCCEEEEESCGG
T ss_pred EEecC------CHH-HHHHHHHHHHHhC-CceEEEEEcChh
Confidence 76442 222 2223333444455 566666655553
No 342
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=91.69 E-value=0.39 Score=41.02 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=61.3
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCc
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (248)
+.++.+||=+|+|. |..+..+++. +..+|+++|.+++-++.+++. +. ...+...-...++.+.+.+ ..+.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----Ga---~~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----GV---NEFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----TC---CEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CC---cEEEccccCchhHHHHHHHhcCCC
Confidence 45889999999875 6656666554 555899999999988877642 21 1122111002223222211 2347
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCC-cEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~~ 145 (248)
+|+|+-... . ...++.+.+.|++| |.++..
T Consensus 264 ~D~vid~~g------~----~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 264 VDYSFECIG------N----VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp BSEEEECSC------C----HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEEEECCC------C----HHHHHHHHHHhhccCCEEEEE
Confidence 999975432 1 23567778899997 998876
No 343
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=91.63 E-value=0.63 Score=39.56 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=60.8
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC--Cchhhhhcc-cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 103 (248)
+.++.+||-+|+|. |..+..++.. +..+|+++|.+++.++.+++.-. ...+ |..+ .++.+.+.. ..
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi--~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-------TECI--NPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-------SEEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-------ceEe--ccccccccHHHHHHHHhC
Confidence 45889999999875 5555566554 55589999999998888764311 1112 2211 222222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCC-cEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~~ 145 (248)
+.+|+|+..... ...++.+.+.|+++ |.++..
T Consensus 259 ~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 259 GGVDYSFECIGN----------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCc----------HHHHHHHHHhhccCCcEEEEE
Confidence 479999754321 23466778899999 998875
No 344
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.61 E-value=0.52 Score=40.09 Aligned_cols=98 Identities=15% Similarity=0.081 Sum_probs=60.9
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC--Cchhhhhcc-cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 103 (248)
+.++.+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++. +. ...+ |..+ .++.+.+.. ..
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga---~~vi--~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----GA---TECL--NPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----TC---SEEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CC---cEEE--ecccccchHHHHHHHHhC
Confidence 45889999999875 6555666554 555899999999988877642 20 1122 2211 223222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCC-cEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~~ 145 (248)
+.+|+|+..... ...++...+.|+++ |.++..
T Consensus 260 gg~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVECAGR----------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCC----------HHHHHHHHHHHhcCCCEEEEE
Confidence 479999754321 23466778899999 998865
No 345
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.60 E-value=0.43 Score=41.06 Aligned_cols=107 Identities=15% Similarity=0.067 Sum_probs=63.1
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCc-hhhhhcc--cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN-FETQMQE--KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~--~~ 103 (248)
+.++.+||-+|||. |..+..+++. +...|+++|.+++-++.+++. + +..+ |..+.+ +.+.+.. ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~~i--~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----G----FEIA--DLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----T----CEEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----C----CcEE--ccCCcchHHHHHHHHhCC
Confidence 45889999999876 6666666665 555799999999988877542 2 2222 222211 2222211 12
Q ss_pred CceeEEEeccchhhhc-----CCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCF-----ETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~-----~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+-........ .+.......++...++|++||.++..
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 4699997644321000 00001123567778899999998765
No 346
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.42 E-value=0.32 Score=40.76 Aligned_cols=98 Identities=10% Similarity=-0.039 Sum_probs=61.1
Q ss_pred cCCCCeEEEEcCC--CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCc
Q 025754 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (248)
+.++.+||-.|++ .|..+..++...-.+|+++|.+++-++.+.+.+ + +. ...|..+.++...+.. ..+.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g----~~-~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---G----FD-GAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---C----CS-EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C----CC-EEEECCCHHHHHHHHHhcCCC
Confidence 4589999999983 365555555543339999999998877663222 2 11 1123333333322211 2357
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+.... . ..+..+.+.|+++|.++..
T Consensus 219 ~d~vi~~~g-------~----~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 219 IDVFFDNVG-------G----EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEEESSC-------H----HHHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECCC-------c----chHHHHHHHHhhCCEEEEE
Confidence 999976442 1 2567788899999999875
No 347
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.31 E-value=0.7 Score=39.08 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=60.6
Q ss_pred cCCC------CeEEEEcCCC-CccH-hHHH-Hc-CCCeEEEEeCChH---HHHHHHHHHHhcCCCceEEEEEcCCCCCch
Q 025754 29 SHPY------VTVCDLYCGA-GVDV-DKWE-TA-LIANYIGIDVATS---GIGEARDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 29 ~~~~------~~VLDlGcG~-G~~~-~~l~-~~-~~~~v~giDis~~---~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
+.++ .+||=+|+|. |..+ ..++ +. +..+|+++|.+++ -++.+++. + +..+ |..+.++
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l----G----a~~v--~~~~~~~ 233 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL----D----ATYV--DSRQTPV 233 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT----T----CEEE--ETTTSCG
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc----C----Cccc--CCCccCH
Confidence 4578 9999999865 6666 6666 44 5545999999987 77776532 2 2223 4433333
Q ss_pred hhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 96 ETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+ +....+.+|+|+-... .. ..++.+.+.|+++|.++..
T Consensus 234 ~~-i~~~~gg~Dvvid~~g------~~----~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 234 ED-VPDVYEQMDFIYEATG------FP----KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp GG-HHHHSCCEEEEEECSC------CH----HHHHHHHHHEEEEEEEEEC
T ss_pred HH-HHHhCCCCCEEEECCC------Ch----HHHHHHHHHHhcCCEEEEE
Confidence 32 2111237999975432 11 2456677889999998876
No 348
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.30 E-value=0.54 Score=39.59 Aligned_cols=91 Identities=16% Similarity=0.107 Sum_probs=59.8
Q ss_pred hcCCCCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
-+.++.+||-+|+|. |..+..+++....+|+++|.+++-++.+++. +. ...+ .+. ..+ ...+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga---~~v~-~~~--~~~-------~~~~ 235 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM----GV---KHFY-TDP--KQC-------KEEL 235 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT----TC---SEEE-SSG--GGC-------CSCE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc----CC---Ceec-CCH--HHH-------hcCC
Confidence 356899999999875 6666666665334999999999988877652 21 1122 221 111 2379
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|+....-. ..++...+.|+++|.++..
T Consensus 236 D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 236 DFIISTIPTH----------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEEEECCCSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCcH----------HHHHHHHHHHhcCCEEEEE
Confidence 9997644221 1356677899999999876
No 349
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.22 E-value=0.43 Score=39.90 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=59.7
Q ss_pred cCCCCeEEEEcC-C-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||-.|+ | -|..+..++.....+|+++|.+++-++.+++. +. ...+ |..+.++...+.. ...
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~~~--~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----GA---EYLI--NASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC---SEEE--ETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---cEEE--eCCCchHHHHHHHHhCCC
Confidence 458899999994 3 35555555554334899999999888876542 10 1122 2223333322221 134
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+....- ..++.+.+.|++||.++..
T Consensus 217 g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 217 GVDASFDSVGK-----------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp CEEEEEECCGG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCh-----------HHHHHHHHHhccCCEEEEE
Confidence 69999765432 2356677789999998875
No 350
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.21 E-value=0.35 Score=40.95 Aligned_cols=97 Identities=14% Similarity=0.088 Sum_probs=58.5
Q ss_pred cCCCCeEEEEcCC--CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||-.|++ .|..+..++.....+|+++|.+++.++.+++. +. ... .|..+.++.+.+.. ...
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~~--~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GA---HEV--FNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC---SEE--EETTSTTHHHHHHHHHCTT
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CC---CEE--EeCCCchHHHHHHHHcCCC
Confidence 4578999999973 35555555554334899999999887766432 21 111 23333333222211 134
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+....- ..+....+.|+++|.++..
T Consensus 239 ~~D~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 239 GIDIIIEMLAN-----------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CEEEEEESCHH-----------HHHHHHHHHEEEEEEEEEC
T ss_pred CcEEEEECCCh-----------HHHHHHHHhccCCCEEEEE
Confidence 79999765421 1355677899999998875
No 351
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=91.16 E-value=0.26 Score=42.19 Aligned_cols=100 Identities=19% Similarity=0.111 Sum_probs=60.0
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCC-CCchhhhhcc--cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE--KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~--~~ 103 (248)
+.++.+||-+|+|. |..+..++.. +..+|+++|.+++-++.+++. +. ...+..+.. +.++.+.+.. ..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi~~~~~~~~~~~~~v~~~~~g 265 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----GA---DLTLNRRETSVEERRKAIMDITHG 265 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----TC---SEEEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc----CC---cEEEeccccCcchHHHHHHHHhCC
Confidence 45789999999774 5555666655 435999999999888877632 21 112222100 1222222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+..... ...++...+.|+++|.++..
T Consensus 266 ~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 266 RGADFILEATGD----------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp SCEEEEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 369999764421 12456677889999998875
No 352
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.04 E-value=0.32 Score=41.04 Aligned_cols=98 Identities=12% Similarity=0.005 Sum_probs=60.6
Q ss_pred cCCCCeEEEEcCC--CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCC-CCchhhhhcc-cCC
Q 025754 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE-KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~-~~~ 104 (248)
+.++.+||-+|++ .|..+..++.....+|+++|.+++.++.+++. + ... ..|.. ..++...+.. ..+
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~----g----~~~-~~d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI----G----GEV-FIDFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT----T----CCE-EEETTTCSCHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc----C----Cce-EEecCccHhHHHHHHHHhCC
Confidence 4588999999983 45555555554334999999998887766542 2 111 12443 2333222211 122
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+..... ...++.+.+.|+++|.++..
T Consensus 238 ~~D~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 238 GAHGVINVSVS----------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp CEEEEEECSSC----------HHHHHHHTTSEEEEEEEEEC
T ss_pred CCCEEEECCCc----------HHHHHHHHHHHhcCCEEEEE
Confidence 79999765431 23567788999999998865
No 353
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.86 E-value=0.6 Score=39.15 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=59.8
Q ss_pred cCCCCeEEEEcC-C-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCC-chhhhhcc-cCC
Q 025754 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQE-KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~-~~~ 104 (248)
+.++.+||-.|+ | .|..+..++.....+|+++|.+++.++.+++.+ +. ...+ |..+. ++...+.. ..+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~---~~~~--d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GF---DDAF--NYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CC---SEEE--ETTSCSCSHHHHHHHCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC---ceEE--ecCCHHHHHHHHHHHhCC
Confidence 457899999997 3 465555555543348999999998877765322 21 1112 33221 22222211 125
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+..... ..++...+.|++||.++..
T Consensus 225 ~~d~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 225 GIDIYFENVGG-----------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CEEEEEESSCH-----------HHHHHHHTTEEEEEEEEEC
T ss_pred CCcEEEECCCH-----------HHHHHHHHHHhcCCEEEEE
Confidence 69999765421 2567788899999998875
No 354
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.67 E-value=0.66 Score=39.48 Aligned_cols=98 Identities=15% Similarity=0.137 Sum_probs=60.7
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC--Cchhhhhcc-cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 103 (248)
+.++.+||-+|+|. |..+..++.. +..+|+++|.+++.++.+++. +. ...+ |..+ .++.+.+.. ..
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GA---TDFV--NPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TC---CEEE--CGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----CC---ceEE--eccccchhHHHHHHHHhC
Confidence 45889999999875 5556666654 444899999999988877642 20 1112 2221 223222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCC-cEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~~ 145 (248)
+.+|+|+..... ...++.+.+.|+++ |.++..
T Consensus 261 ~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 261 GGVDFSLECVGN----------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCC----------HHHHHHHHHHhhcCCcEEEEE
Confidence 479999754321 23466778899999 998875
No 355
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.56 E-value=0.23 Score=41.84 Aligned_cols=95 Identities=15% Similarity=0.027 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCC-CccHhHHHHcC--CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC-CchhhhhcccCCce
Q 025754 31 PYVTVCDLYCGA-GVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQA 106 (248)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~l~~~~--~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~f 106 (248)
++.+||-+|+|. |..+..++... -.+|+++|.+++-++.+++.- . ...+ |..+ .+....+. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lG--a-----~~vi--~~~~~~~~~~~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELG--A-----DYVS--EMKDAESLINKLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHT--C-----SEEE--CHHHHHHHHHHHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhC--C-----CEEe--ccccchHHHHHhh-cCCCc
Confidence 899999999974 55555665543 348999999999888776531 1 1111 1111 11111121 12379
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|+..... ...++.+.+.|+++|.++..
T Consensus 240 D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDLVGT----------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCC----------hHHHHHHHHHhhcCCEEEEe
Confidence 999764421 12466677889999998875
No 356
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=90.17 E-value=1.1 Score=37.77 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=58.4
Q ss_pred CCCeEEEE-cCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCcee
Q 025754 31 PYVTVCDL-YCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (248)
Q Consensus 31 ~~~~VLDl-GcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD 107 (248)
++.+||=+ |+|. |..+..++...-.+|+++|.+++-++.+++.- . ...+ |..+ ++.+.+.. ....+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG--a-----~~vi--~~~~-~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMG--A-----DIVL--NHKE-SLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHT--C-----SEEE--CTTS-CHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC--C-----cEEE--ECCc-cHHHHHHHhCCCCcc
Confidence 78899999 4554 65556665553349999999998888777531 1 1122 2222 23222211 245799
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+.... ....++.+.++|+++|.++..
T Consensus 220 vv~d~~g----------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 220 YVFCTFN----------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEESSC----------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC----------chHHHHHHHHHhccCCEEEEE
Confidence 9976432 123566777899999999764
No 357
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.11 E-value=0.72 Score=39.22 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=60.3
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC--Cchhhhhcc-cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 103 (248)
+.++.+||-+|+|. |..+..++.. +..+|+++|.+++.++.+++. +. ...+ |..+ .++.+.+.. ..
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GA---TECV--NPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TC---SEEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CC---ceEe--cccccchhHHHHHHHHhC
Confidence 45889999999875 6556666654 444899999999988877542 10 1112 2221 223222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCC-cEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~~ 145 (248)
+.+|+|+.... . ...++...+.|+++ |.++..
T Consensus 260 ~g~D~vid~~g------~----~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 260 GGVDFSFEVIG------R----LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SCBSEEEECSC------C----HHHHHHHHHHBCTTTCEEEEC
T ss_pred CCCcEEEECCC------C----HHHHHHHHHHhhcCCcEEEEe
Confidence 47999875432 1 13456677889999 998875
No 358
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.05 E-value=0.81 Score=38.94 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=60.4
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC--Cchhhhhcc-cC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 103 (248)
+.++.+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++. +. ...+ |..+ .++.+.+.. ..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga---~~vi--~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----GA---TDCL--NPRELDKPVQDVITELTA 263 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TC---SEEE--CGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CC---cEEE--ccccccchHHHHHHHHhC
Confidence 34789999999875 6556666654 444899999999988877642 10 1112 2221 222222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCC-cEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~~ 145 (248)
+.+|+|+-... . ...++.+.+.|+++ |.++..
T Consensus 264 ~g~Dvvid~~G------~----~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 264 GGVDYSLDCAG------T----AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCBSEEEESSC------C----HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCccEEEECCC------C----HHHHHHHHHHhhcCCCEEEEE
Confidence 47999975432 1 23466778899999 998865
No 359
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.02 E-value=0.63 Score=39.35 Aligned_cols=97 Identities=11% Similarity=-0.061 Sum_probs=58.3
Q ss_pred cCCCCeEEEEcC-C-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||-.|+ | .|..+..++.....+|+++|.+++.++.+++. + .. ...|..+.++.+.+.. ...
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g----~~-~~~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----G----AA-AGFNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----C----Cc-EEEecCChHHHHHHHHHhcCC
Confidence 347899999984 3 35555555544334899999999888877432 1 11 1123333333222211 124
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+...... .+....+.|+++|.++..
T Consensus 231 ~~d~vi~~~G~~-----------~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 231 GVNLILDCIGGS-----------YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CEEEEEESSCGG-----------GHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCch-----------HHHHHHHhccCCCEEEEE
Confidence 699987655321 245567789999998876
No 360
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.99 E-value=3.5 Score=32.79 Aligned_cols=109 Identities=13% Similarity=0.047 Sum_probs=66.4
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
.+.++|=.|++.|- .+..++..+. +|+.+|.+++.++...+... .++.++++|+.+..-... ..+..
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 46778888876542 2233444465 89999999988877665542 238899999987432111 11123
Q ss_pred CceeEEEeccchhhh----cCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~----~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
++.|+++........ -.+.++.+ .+++.+...++++|.++..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 579998876543211 01333333 3455667777788888776
No 361
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.94 E-value=0.39 Score=40.43 Aligned_cols=98 Identities=16% Similarity=0.141 Sum_probs=62.2
Q ss_pred hcCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cC
Q 025754 28 YSHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (248)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (248)
...++.+||=+|+|. |..+..+++. +..+|+++|.+++-++.+++. +. ...+..+ + ++.+.+.+ ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----Ga---~~~i~~~--~-~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----GA---DAAVKSG--A-GAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----TC---SEEEECS--T-THHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CC---CEEEcCC--C-cHHHHHHHHhCC
Confidence 356899999999875 6666666654 456999999999988877653 21 1122221 1 22222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+-... . ...++.+.+.|+++|.++..
T Consensus 238 ~g~d~v~d~~G------~----~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 238 QGATAVFDFVG------A----QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp GCEEEEEESSC------C----HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCeEEEECCC------C----HHHHHHHHHHHhcCCEEEEE
Confidence 37999975432 1 23566777899999999876
No 362
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.88 E-value=0.28 Score=41.32 Aligned_cols=95 Identities=15% Similarity=0.089 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCcee
Q 025754 31 PYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (248)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD 107 (248)
++.+||-+|+|. |..+..++.. +..+|+++|.+++-++.+++. . ... .|..+.++.+.+.. ....+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-------~~v--~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-------DRL--VNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-------SEE--ECTTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-------Hhc--cCcCccCHHHHHHHhcCCCCC
Confidence 789999999864 5555566554 444899999998877665432 1 111 23333333322211 134699
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+..... ...++...+.|+++|.++..
T Consensus 234 ~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 234 VLLEFSGN----------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 99764421 13456677889999998865
No 363
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.84 E-value=1.1 Score=37.46 Aligned_cols=97 Identities=21% Similarity=0.187 Sum_probs=59.5
Q ss_pred cCCCCeEEEEcC--CCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYC--GAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGc--G~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||-.|+ |.|..+..++.....+|+++|.+++.++.+++. + .. ...|..+.+..+.+.+ ...
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g----~~-~~~d~~~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----G----CH-HTINYSTQDFAEVVREITGGK 213 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----C----CC-EEEECCCHHHHHHHHHHhCCC
Confidence 447899999995 345555555544334899999999888777542 1 11 1123333333222211 134
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+..... ..++.+.+.|+++|.++..
T Consensus 214 ~~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 214 GVDVVYDSIGK-----------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp CEEEEEECSCT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred CCeEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 69999765432 2356677899999998875
No 364
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.71 E-value=2.2 Score=31.01 Aligned_cols=104 Identities=7% Similarity=-0.001 Sum_probs=58.8
Q ss_pred CCeEEEEcCCC-CccHh-HHHHcCCCeEEEEeCCh-HHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 32 YVTVCDLYCGA-GVDVD-KWETALIANYIGIDVAT-SGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~-~l~~~~~~~v~giDis~-~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..+|+=+|+|. |..+. .+...+. .|+.+|.++ +..+....... .+ +.++.+|..+....... .-...|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~-~~----~~~i~gd~~~~~~l~~a--~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG-DN----ADVIPGDSNDSSVLKKA--GIDRCRA 74 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC-TT----CEEEESCTTSHHHHHHH--TTTTCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc-CC----CeEEEcCCCCHHHHHHc--ChhhCCE
Confidence 45678788764 33222 2223344 899999974 44433332221 12 67889998765432211 2356888
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
|++.. .+. .....+....+.+.|...++....+..
T Consensus 75 vi~~~------~~d-~~n~~~~~~a~~~~~~~~ii~~~~~~~ 109 (153)
T 1id1_A 75 ILALS------DND-ADNAFVVLSAKDMSSDVKTVLAVSDSK 109 (153)
T ss_dssp EEECS------SCH-HHHHHHHHHHHHHTSSSCEEEECSSGG
T ss_pred EEEec------CCh-HHHHHHHHHHHHHCCCCEEEEEECCHH
Confidence 87643 222 344555566667778888777655543
No 365
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.47 E-value=6.8 Score=31.11 Aligned_cols=113 Identities=5% Similarity=-0.053 Sum_probs=66.8
Q ss_pred CCCeEEEEcCC--CC--c-cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcc
Q 025754 31 PYVTVCDLYCG--AG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQE 101 (248)
Q Consensus 31 ~~~~VLDlGcG--~G--~-~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~ 101 (248)
.+.+||=.|++ .| . .+..++..+. +|+.++.+....+.+.+.....+ ..++.++++|+.+..-... +..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 46778888876 33 2 2234444565 89999988766665555444322 1248899999987542211 111
Q ss_pred cCCceeEEEeccchhh--------hcCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQM--------CFETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~--------~~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
..++.|+++...+... .-.+.+... .+++.+...|+++|.++..
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 2357898877654321 012333333 3556777788888888776
No 366
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.32 E-value=4.8 Score=32.37 Aligned_cols=112 Identities=13% Similarity=-0.012 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCC------------hHHHHHHHHHHHhcCCCceEEEEEcCCCCCch
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
.+.+||=-|++.|- .+..++..+. +|+.+|.+ ...++.+.......+ .++.++++|+.+..-
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 46778888876642 2233444465 89999987 666665555444332 358899999987432
Q ss_pred hhh----hcccCCceeEEEeccchhhhc--CCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 96 ETQ----MQEKANQADLVCCFQHLQMCF--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 96 ~~~----~~~~~~~fD~V~~~~~l~~~~--~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
... .....++.|+++...+..... .+.+..+ .+++.+...|+.+|.++..
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 111 111235789988766542110 1223232 3456677778888888776
No 367
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=89.26 E-value=0.34 Score=41.08 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=59.4
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCC-chhhhhcccCCc
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQEKANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~ 105 (248)
+.++.+||-+|+|. |..+..++.. +. +|+++|.+++-++.+++. +. ...+. ..+. ++...+ .+.
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l--Ga-----~~v~~--~~~~~~~~~~~---~~~ 243 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM--GA-----DHYIA--TLEEGDWGEKY---FDT 243 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH--TC-----SEEEE--GGGTSCHHHHS---CSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc--CC-----CEEEc--CcCchHHHHHh---hcC
Confidence 45899999999964 5555566554 55 799999999988887652 11 11222 1112 222222 257
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+.....- . ...++.+.+.|++||.++..
T Consensus 244 ~D~vid~~g~~----~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 244 FDLIVVCASSL----T----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEEEECCSCS----T----TCCTTTGGGGEEEEEEEEEC
T ss_pred CCEEEECCCCC----c----HHHHHHHHHHhcCCCEEEEe
Confidence 99997654320 0 11245567899999998865
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=89.23 E-value=1.1 Score=37.82 Aligned_cols=97 Identities=11% Similarity=0.009 Sum_probs=59.7
Q ss_pred cCCCCeEEEEc-CC-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCc
Q 025754 29 SHPYVTVCDLY-CG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlG-cG-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (248)
+.++.+||-.| +| -|..+..++.....+|+++|.+++.++.+++.- . ...+ |..+.++.+.+.. ....
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lG--a-----~~~~--~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLG--A-----KRGI--NYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT--C-----SEEE--ETTTSCHHHHHHHHHSSC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC--C-----CEEE--eCCchHHHHHHHHHhCCC
Confidence 34889999995 34 365555665553348999999999888776531 1 1122 2233333322211 1457
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+....-. .+....+.|+++|.++..
T Consensus 236 ~Dvvid~~g~~-----------~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 236 VDIILDMIGAA-----------YFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEEEEESCCGG-----------GHHHHHHTEEEEEEEEEC
T ss_pred ceEEEECCCHH-----------HHHHHHHHhccCCEEEEE
Confidence 99997654321 356677899999998875
No 369
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.08 E-value=2.3 Score=31.96 Aligned_cols=102 Identities=14% Similarity=0.125 Sum_probs=59.2
Q ss_pred CCeEEEEcCCC-CccHh-HHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 32 YVTVCDLYCGA-GVDVD-KWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~-~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
+.+|+=+|||. |..+. .+... +. .|+++|.+++.++.++. .+ +..+.+|..+........ ....+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~-~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERIL-DTGHVKL 108 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBC-SCCCCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhcc-CCCCCCE
Confidence 56899999886 44333 33344 55 89999999987766542 22 456778876543211100 1346898
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
|++.. .+.+....++ ...+.+.|++.++....+..
T Consensus 109 vi~~~------~~~~~~~~~~-~~~~~~~~~~~ii~~~~~~~ 143 (183)
T 3c85_A 109 VLLAM------PHHQGNQTAL-EQLQRRNYKGQIAAIAEYPD 143 (183)
T ss_dssp EEECC------SSHHHHHHHH-HHHHHTTCCSEEEEEESSHH
T ss_pred EEEeC------CChHHHHHHH-HHHHHHCCCCEEEEEECCHH
Confidence 87633 2222233333 34556677888887765543
No 370
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.83 E-value=0.7 Score=38.46 Aligned_cols=96 Identities=14% Similarity=0.131 Sum_probs=59.0
Q ss_pred cCCCCeEEEEcC-C-CCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cC
Q 025754 29 SHPYVTVCDLYC-G-AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (248)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (248)
+.++.+||-.|+ | .|..+..++.. +. +|+++|.+++.++.+++. ... . . .|..+.+..+.+.. ..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~--g~~----~-~--~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA--GAW----Q-V--INYREEDLVERLKEITGG 207 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH--TCS----E-E--EETTTSCHHHHHHHHTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc--CCC----E-E--EECCCccHHHHHHHHhCC
Confidence 347899999994 2 35555555443 55 899999999888777652 111 1 1 23333333222211 12
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+.... . ..++.+.+.|+++|.++..
T Consensus 208 ~~~D~vi~~~g-~----------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 208 KKVRVVYDSVG-R----------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp CCEEEEEECSC-G----------GGHHHHHHTEEEEEEEEEC
T ss_pred CCceEEEECCc-h----------HHHHHHHHHhcCCCEEEEE
Confidence 46999977653 1 2356677899999998875
No 371
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.73 E-value=0.95 Score=38.35 Aligned_cols=97 Identities=12% Similarity=0.000 Sum_probs=60.1
Q ss_pred cCCCCeEEEEc-CC-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCc
Q 025754 29 SHPYVTVCDLY-CG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlG-cG-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (248)
+.++.+||-.| +| .|..+..++.....+|+++|.+++.++.+++. +. ...+ |..+.++.+.+.. ....
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga---~~~~--~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL----GC---DRPI--NYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC---SEEE--ETTTSCHHHHHHHHCTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc----CC---cEEE--ecCChhHHHHHHHhcCCC
Confidence 45889999999 34 46666666554333899999998888777642 21 1122 2222333222211 2346
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+..... ..++.+.+.|+++|.++..
T Consensus 232 ~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 232 VDVVYESVGG-----------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEEEECSCT-----------HHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCH-----------HHHHHHHHHHhcCCEEEEE
Confidence 9999765421 2566777899999998875
No 372
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=88.57 E-value=0.34 Score=46.65 Aligned_cols=104 Identities=15% Similarity=0.135 Sum_probs=67.6
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
...+.++||+|.|.-.=...+.. ....|+.+|+-|-+- ....+.....|++.|-....+. ...++|.
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLiP-~~~pvtm~D~RP~ae-------~~~~w~~~T~f~~~DyL~~~~~-----~~~~~D~ 885 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELIP-ATSPVTCVDIRPTAQ-------PSGCWNVRTTFLELDYLSDGWI-----TGVRGDI 885 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTSC-TTSCEEEEESSCCCS-------CSTTBSSCEEEEESCTTSSSCG-----GGCCCSE
T ss_pred ecccceEEEccCCCcceeeeecC-CCCceEEecccCchh-------hhccccccceeeEcccccccee-----ecCCCcE
Confidence 44678999999998642222222 223799999877431 1112233478999998776664 2457999
Q ss_pred EEeccchhhhcCCHH-HHHHHHHHHhccccCCcE--EEEE
Q 025754 109 VCCFQHLQMCFETEE-RARRLLQNVSSLLKPGGY--FLGI 145 (248)
Q Consensus 109 V~~~~~l~~~~~~~~-~~~~~l~~~~~~LkpgG~--~i~~ 145 (248)
|+|.+++...+-... .+.+.++++.+.+++.|. +++.
T Consensus 886 vt~i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~~~l~lQ 925 (1289)
T 1ej6_A 886 VTCMLSLGAAAAGKSMTFDAAFQQLIKVLSKSTANVVLVQ 925 (1289)
T ss_dssp EEECSCHHHHHHHHTCCHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEEEeechhhhhccCCcHHHHHHHHHHHHHhcCccEEEEE
Confidence 999998865432221 367788888888877663 5555
No 373
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=88.54 E-value=2.4 Score=35.36 Aligned_cols=98 Identities=10% Similarity=0.047 Sum_probs=58.4
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
..++.+||=.|+|. |..+..++.. +...++++|.+++-++.+++.-. ...+. ..+.+..+.... ...
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-------~~~i~--~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-------MQTFN--SSEMSAPQMQSVLRELR 228 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------SEEEE--TTTSCHHHHHHHHGGGC
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-------eEEEe--CCCCCHHHHHHhhcccC
Confidence 45899999999986 3334444443 56678999999998887765311 11222 222222211110 234
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+.... ....++...++|++||.+++.
T Consensus 229 g~d~v~d~~G----------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 229 FNQLILETAG----------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp SSEEEEECSC----------SHHHHHHHHHHCCTTCEEEEC
T ss_pred Cccccccccc----------ccchhhhhhheecCCeEEEEE
Confidence 5788765432 123456677889999998876
No 374
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=88.52 E-value=0.79 Score=38.51 Aligned_cols=96 Identities=16% Similarity=0.096 Sum_probs=59.8
Q ss_pred cCCCCeEEEEcC-C-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||=.|+ | -|..+..++.....+|++++.+++-++.+++.- . ...+..+ .++.+.+.. ...
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g--a-----~~v~~~~---~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVG--A-----DIVLPLE---EGWAKAVREATGGA 226 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT--C-----SEEEESS---TTHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC--C-----cEEecCc---hhHHHHHHHHhCCC
Confidence 358899999997 3 366666665553349999999999888776531 1 1122222 223222211 123
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+..... ..+..+.+.|+++|.++..
T Consensus 227 g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 227 GVDMVVDPIGG-----------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp CEEEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCch-----------hHHHHHHHhhcCCCEEEEE
Confidence 69999764421 1356677899999999876
No 375
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=88.06 E-value=2.7 Score=34.08 Aligned_cols=83 Identities=10% Similarity=-0.035 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCC-chh----hhhccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFE----TQMQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~----~~~~~~ 102 (248)
.+.+||=.|++.|- .+..++..+. +|+.++.++..++.+.+.....+ ..++.++.+|+.+. .-. ..+...
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 45678877766541 2233444465 89999999988877766655432 23588999999885 321 111112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+++...+.
T Consensus 89 ~g~iD~lv~nAg~ 101 (311)
T 3o26_A 89 FGKLDILVNNAGV 101 (311)
T ss_dssp HSSCCEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 3579999887654
No 376
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=87.84 E-value=0.78 Score=38.92 Aligned_cols=91 Identities=13% Similarity=0.084 Sum_probs=56.1
Q ss_pred CCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCCh---HHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 32 YVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVAT---SGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~---~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
+.+||-+|+|. |..+..++.. +. +|+++|.++ +-++.+++. + +..+ | .+ ++.+.+....+.+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~----g----a~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET----K----TNYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH----T----CEEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh----C----Ccee--c-hH-HHHHHHHHhCCCC
Confidence 89999999853 4444444443 55 999999998 766666532 2 2222 3 22 2222221112579
Q ss_pred eEEEeccchhhhcCCHHHHHHHH-HHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLL-QNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l-~~~~~~LkpgG~~i~~ 145 (248)
|+|+...... ..+ +.+.+.|+++|.++..
T Consensus 248 d~vid~~g~~----------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 248 DVIIDATGAD----------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEEECCCCC----------THHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCCCh----------HHHHHHHHHHHhcCCEEEEE
Confidence 9997654321 134 7778899999998876
No 377
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=87.71 E-value=0.37 Score=39.86 Aligned_cols=62 Identities=19% Similarity=0.199 Sum_probs=39.5
Q ss_pred EEEEEcCCCCCchhhhhcccCCceeEEEeccchhhhc--C--------------CHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 83 AEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCF--E--------------TEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 83 ~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--~--------------~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
..++++|+.+ ....+ ++++||+|++.--....- . ....+..++.++.++|+|||.+++.+
T Consensus 22 ~~i~~gD~~~--~l~~l--~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 22 HRLHVGDARE--VLASF--PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp EEEEESCHHH--HHTTS--CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEECcHHH--HHhhC--CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 6789999744 11111 357899998853221000 0 01224567889999999999999886
Q ss_pred cC
Q 025754 147 PD 148 (248)
Q Consensus 147 ~~ 148 (248)
.+
T Consensus 98 ~d 99 (297)
T 2zig_A 98 GD 99 (297)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 378
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=87.68 E-value=0.69 Score=41.11 Aligned_cols=58 Identities=12% Similarity=0.072 Sum_probs=43.1
Q ss_pred CCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC
Q 025754 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA 92 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (248)
..+++||-||.|+....+...+...+.++|+++.+++.-+..+.... ....++.|+.+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p---~~~~~~~DI~~ 145 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDP---ATHHFNEDIRD 145 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCT---TTCEEESCTHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCC---Ccceeccchhh
Confidence 35899999999999999988887678999999988776555442111 13466788754
No 379
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=87.36 E-value=0.83 Score=37.78 Aligned_cols=87 Identities=11% Similarity=-0.044 Sum_probs=55.8
Q ss_pred cCCCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
+.++.+||=+|+|. |..+..+++. +. +|+++| +++-++.+++. + +..+.-| .+.+ ...+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----G----a~~v~~d------~~~v---~~g~ 200 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----G----VRHLYRE------PSQV---TQKY 200 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----T----EEEEESS------GGGC---CSCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----C----CCEEEcC------HHHh---CCCc
Confidence 34899999999964 6666666655 55 999999 98888877653 2 2222222 1111 5679
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|+-...- ..+....++|+++|.++..
T Consensus 201 Dvv~d~~g~-----------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIFDAVNS-----------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEECC------------------TTGGGEEEEEEEEEE
T ss_pred cEEEECCCc-----------hhHHHHHHHhcCCCEEEEE
Confidence 999653311 1125567899999999876
No 380
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.17 E-value=8.7 Score=31.15 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=64.6
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHH-HHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSG-IGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~-l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.+... .+...+.....+ .++.++++|+.+..-.. ...+.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45788888876542 2233444465 89999988763 333333333322 35889999998743211 11112
Q ss_pred CCceeEEEeccchhhh---c--CCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQMC---F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~---~--~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
.++.|+++...+.... + .+.++.+ .+++.+...|+++|.++..
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 3578998876543211 0 1333333 3556777788888988776
No 381
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.15 E-value=7.9 Score=31.95 Aligned_cols=84 Identities=13% Similarity=0.013 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|++++.++..++.+.+.+...+...++.++++|+.+..-.. ......
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 35678888876552 2233344466 899999999988877766654332235889999998743211 111224
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
+..|+++...+.
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 678999887653
No 382
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=87.08 E-value=0.47 Score=39.10 Aligned_cols=92 Identities=15% Similarity=0.065 Sum_probs=58.1
Q ss_pred cCCCCeEEEEcC-C-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCC-CchhhhhcccCCc
Q 025754 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~ 105 (248)
+.++.+||-+|+ | .|..+..++.....+|+++|.+++.++.+++. +. ...+ |..+ .++.+.+ ..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~~~--~~~~~~~~~~~~----~~ 189 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GA---EEAA--TYAEVPERAKAW----GG 189 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TC---SEEE--EGGGHHHHHHHT----TS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CC---CEEE--ECCcchhHHHHh----cC
Confidence 678999999998 3 36656566554334999999999888777542 21 1111 2211 1222111 57
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+. ... ..++...+.|+++|.++..
T Consensus 190 ~d~vid-~g~-----------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 190 LDLVLE-VRG-----------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEEE-CSC-----------TTHHHHHTTEEEEEEEEEC
T ss_pred ceEEEE-CCH-----------HHHHHHHHhhccCCEEEEE
Confidence 999987 421 1356778899999998765
No 383
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=86.84 E-value=1.3 Score=37.39 Aligned_cols=98 Identities=10% Similarity=-0.063 Sum_probs=59.9
Q ss_pred cCCC--CeEEEEcCC--CCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-c
Q 025754 29 SHPY--VTVCDLYCG--AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-K 102 (248)
Q Consensus 29 ~~~~--~~VLDlGcG--~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~ 102 (248)
+.++ .+||-.|++ -|..+..++.. +.++|+++|.+++.++.+++.+ + .. ...|..+.++...+.. .
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g----~~-~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---G----FD-AAINYKKDNVAEQLRESC 227 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---C----CS-EEEETTTSCHHHHHHHHC
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---C----Cc-eEEecCchHHHHHHHHhc
Confidence 4578 999999983 35555555544 4448999999988777665422 2 11 1223333333322221 1
Q ss_pred CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+.+|+|+....- ..++.+.++|+++|.++..
T Consensus 228 ~~~~d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 228 PAGVDVYFDNVGG-----------NISDTVISQMNENSHIILC 259 (357)
T ss_dssp TTCEEEEEESCCH-----------HHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCEEEECCCH-----------HHHHHHHHHhccCcEEEEE
Confidence 2369998765431 3567778899999998865
No 384
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=86.75 E-value=2.4 Score=35.35 Aligned_cols=98 Identities=12% Similarity=0.080 Sum_probs=57.3
Q ss_pred cCCCCeEEEEcCCCCc-cHhHHHH-cCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYCGAGV-DVDKWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~-~~~~l~~-~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
..++.+||=+|+|.++ .+..++. ....+|+++|.+++-++.+++.-.. ..+ |..+.+..+.+.+ ...
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~-------~~i--~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD-------VTI--NSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS-------EEE--EC-CCCHHHHHHHHTTSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe-------EEE--eCCCCCHHHHhhhhcCCC
Confidence 5689999999998743 3333333 3556999999999877766543211 112 2222333322221 123
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|.++... .. ...+....+.|+++|.++..
T Consensus 232 g~d~~~~~~------~~----~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCA------VA----RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECC------SC----HHHHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEec------cC----cchhheeheeecCCceEEEE
Confidence 466664322 11 23466677899999998876
No 385
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=86.53 E-value=12 Score=30.42 Aligned_cols=111 Identities=10% Similarity=-0.091 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCCC-----ccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcc
Q 025754 31 PYVTVCDLYCGAG-----VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQE 101 (248)
Q Consensus 31 ~~~~VLDlGcG~G-----~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~ 101 (248)
.+.+||=.|.+.| ..+..++..+. +|+.++.++...+.+.+.....+ ++.++++|+.+..-.. ....
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 4678888887633 12344445565 89999998765554444333322 3788999998743211 1112
Q ss_pred cCCceeEEEeccchhh--------hcCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQM--------CFETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~--------~~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
..++.|+++...+... .-.+.++.. .+++.+...|+++|.++..
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 2367999887665421 011233332 3455666777778888776
No 386
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.40 E-value=4.3 Score=28.45 Aligned_cols=99 Identities=10% Similarity=0.003 Sum_probs=52.9
Q ss_pred CCeEEEEcCCC-CccHh-HHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 32 YVTVCDLYCGA-GVDVD-KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~-~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
+.+|+=+|+|. |..+. .+...+. +++.+|.+++.++...... + +.++.+|..+...... .....+|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~---~----~~~~~~d~~~~~~l~~--~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI---D----ALVINGDCTKIKTLED--AGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC---S----SEEEESCTTSHHHHHH--TTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc---C----cEEEEcCCCCHHHHHH--cCcccCCEE
Confidence 46788888875 33222 2333354 8999999988766544321 2 4567777754322111 113468988
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+.... .. .....+..+.+.+.++ .++....+
T Consensus 74 i~~~~------~~-~~~~~~~~~~~~~~~~-~ii~~~~~ 104 (140)
T 1lss_A 74 IAVTG------KE-EVNLMSSLLAKSYGIN-KTIARISE 104 (140)
T ss_dssp EECCS------CH-HHHHHHHHHHHHTTCC-CEEEECSS
T ss_pred EEeeC------Cc-hHHHHHHHHHHHcCCC-EEEEEecC
Confidence 76431 22 2233444455557775 45444433
No 387
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=86.21 E-value=2.3 Score=36.10 Aligned_cols=98 Identities=12% Similarity=-0.011 Sum_probs=57.6
Q ss_pred cCCCCeEEEEc-CCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SHPYVTVCDLY-CGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~~~~~VLDlG-cG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
..++.+||=.| +|. |..+..++.....+|++++ +++-++.+++. +. ...+ |..+.++.+.+.. ...+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga---~~v~--~~~~~~~~~~~~~-~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKL----GA---DDVI--DYKSGSVEEQLKS-LKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TC---SEEE--ETTSSCHHHHHHT-SCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHc----CC---CEEE--ECCchHHHHHHhh-cCCC
Confidence 45789999999 453 6666666555334899998 77666665432 21 1122 2223333332322 2469
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEe
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 146 (248)
|+|+....-. ...+....+.|++||.++...
T Consensus 250 D~vid~~g~~---------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 250 DFILDNVGGS---------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SEEEESSCTT---------HHHHGGGGBCSSSCCEEEESC
T ss_pred CEEEECCCCh---------hhhhHHHHHhhcCCcEEEEeC
Confidence 9987644211 123566778999999988763
No 388
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.78 E-value=2.8 Score=32.51 Aligned_cols=99 Identities=8% Similarity=0.021 Sum_probs=57.2
Q ss_pred eEEEEcCCC-CccHh-HHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEe
Q 025754 34 TVCDLYCGA-GVDVD-KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (248)
Q Consensus 34 ~VLDlGcG~-G~~~~-~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (248)
+|+=+|+|. |..+. .+...+. .|+.+|.+++.++..... .+ ..++.+|..+....... .-...|+|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~---~~----~~~i~gd~~~~~~l~~a--~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKK---LK----ATIIHGDGSHKEILRDA--EVSKNDVVVI 71 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHH---SS----SEEEESCTTSHHHHHHH--TCCTTCEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHH---cC----CeEEEcCCCCHHHHHhc--CcccCCEEEE
Confidence 466677654 32222 2233344 899999999887654432 12 56889998775432221 2356888876
Q ss_pred ccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
.. .+. .....+..+.+.+.|...++....+.
T Consensus 72 ~~------~~d-~~n~~~~~~a~~~~~~~~iia~~~~~ 102 (218)
T 3l4b_C 72 LT------PRD-EVNLFIAQLVMKDFGVKRVVSLVNDP 102 (218)
T ss_dssp CC------SCH-HHHHHHHHHHHHTSCCCEEEECCCSG
T ss_pred ec------CCc-HHHHHHHHHHHHHcCCCeEEEEEeCc
Confidence 43 222 24445555556666777776654433
No 389
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=85.75 E-value=6 Score=32.17 Aligned_cols=109 Identities=13% Similarity=-0.002 Sum_probs=68.4
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
++..+|=-|.+.|- .+..++..+. +|+.+|.+++.++.+.+.+.. ++..+++|+.+..-.+ ...+.-
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGG-----GAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCC-----CeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57788888877762 2234444566 899999999988877655422 3678899998754221 112234
Q ss_pred CceeEEEeccchhhh--c--CCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMC--F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~--~--~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
++.|+++.+...... + .+.++.+ .+.+.+...|+.+|.++..
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 689998876543211 0 1233333 3456777888888887766
No 390
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=85.70 E-value=2 Score=31.42 Aligned_cols=103 Identities=10% Similarity=0.074 Sum_probs=56.6
Q ss_pred CCCeEEEEcCCC-CccHhHHH-HcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 31 PYVTVCDLYCGA-GVDVDKWE-TALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~l~-~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
++.+|+=+|||. |..+...+ ..+. +|+++|.+++.++.++. ..+ ...+.+|..+....... ....+|+
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~~g----~~~~~~d~~~~~~l~~~--~~~~ad~ 87 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---EFS----GFTVVGDAAEFETLKEC--GMEKADM 87 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---TCC----SEEEESCTTSHHHHHTT--TGGGCSE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---cCC----CcEEEecCCCHHHHHHc--CcccCCE
Confidence 578999999876 44333333 3354 89999999876543321 112 44566776542221100 1246898
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
|+... .+.. ....+..+.+.+.+...++....+..
T Consensus 88 Vi~~~------~~~~-~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 88 VFAFT------NDDS-TNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp EEECS------SCHH-HHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred EEEEe------CCcH-HHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 87643 2222 33344445555566667776655443
No 391
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=85.62 E-value=1.5 Score=37.67 Aligned_cols=59 Identities=5% Similarity=-0.050 Sum_probs=38.4
Q ss_pred hHHHHHHHHHhcCCCCeEEEEcCCCCccHhHHHHc--------CCCeEEEEeCChHHHHHHHHHHHh
Q 025754 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETA--------LIANYIGIDVATSGIGEARDTWEN 76 (248)
Q Consensus 18 ~~~~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~--------~~~~v~giDis~~~l~~a~~~~~~ 76 (248)
.|+...+...-.+....|+|+|.|+|.++..++.. ...+|..+|+|+...+.-++++..
T Consensus 67 ~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 67 LWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp HHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred HHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 44433332222344567999999999987666432 123899999999888765555543
No 392
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.36 E-value=13 Score=30.10 Aligned_cols=111 Identities=8% Similarity=-0.090 Sum_probs=65.4
Q ss_pred CCCeEEEEcCCC--C--c-cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcc
Q 025754 31 PYVTVCDLYCGA--G--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQE 101 (248)
Q Consensus 31 ~~~~VLDlGcG~--G--~-~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~ 101 (248)
.+.+||=.|++. | . .+..++..+. +|+.+|.++...+.+.+.....+ .+.++++|+.+..-... ..+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 357788888753 3 1 2334444565 89999999876655554443333 26789999987432111 111
Q ss_pred cCCceeEEEeccchhhh--------cCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQMC--------FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~--------~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
.-++.|+++...+.... -.+.++.. .+++.+...|+.+|.++..
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~i 167 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTL 167 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 23578998887654210 12233332 3455677777788888776
No 393
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=85.35 E-value=2.6 Score=39.03 Aligned_cols=123 Identities=13% Similarity=0.199 Sum_probs=68.2
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-----------CC--CeEEEEeC---ChHHHHHHHHHHH-----------hc-----C
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-----------LI--ANYIGIDV---ATSGIGEARDTWE-----------NQ-----R 78 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-----------~~--~~v~giDi---s~~~l~~a~~~~~-----------~~-----~ 78 (248)
+..+|+|+|.|+|......... .. -+++.++. +.+.+..|-+.+. .- +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4569999999999876544221 11 26899998 4444443322111 00 0
Q ss_pred --------CCceEEEEEcCCCCCchhhhhcc-cCCceeEEEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 79 --------KNFIAEFFEADPCAENFETQMQE-KANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 79 --------~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
....++++.+|+.+. .+.+.. ....+|.++.-. +... .+.-....++..+.++++|||.+. +...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~--l~~~~~~~~~~~da~flD~f~p~~--np~~w~~~~~~~l~~~~~~g~~~~-t~~~ 212 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTL--LPTLDDSLNNQVDAWFLDGFAPAK--NPDMWNEQLFNAMARMTRPGGTFS-TFTA 212 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHH--GGGCCGGGTTCEEEEEECSSCC----CCTTCSHHHHHHHHHHEEEEEEEE-ESCC
T ss_pred ceEEEecCCcEEEEEEccCHHHH--HhhcccccCCceeEEEECCCCCCC--ChhhhhHHHHHHHHHHhCCCCEEE-eccC
Confidence 012456677776331 111110 146899997743 2111 111123678899999999999865 4445
Q ss_pred hhHHHHHHHH
Q 025754 149 SSTIWAKYQK 158 (248)
Q Consensus 149 ~~~~~~~~~~ 158 (248)
...+.+.+.+
T Consensus 213 ~~~vr~~l~~ 222 (689)
T 3pvc_A 213 AGFVRRGLQQ 222 (689)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 5566666654
No 394
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.19 E-value=6.5 Score=31.60 Aligned_cols=82 Identities=11% Similarity=0.070 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
++..+|==|.+.|- .+..++..+. +|+.+|.+++.++.+.+.....+ .++.++++|+.+..-.+. ..+.-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46777877877652 2234444565 89999999999988877776543 358899999987542211 11234
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++.+..+
T Consensus 83 G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 SRIDVLCNNAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 689998887653
No 395
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=85.17 E-value=0.45 Score=46.11 Aligned_cols=114 Identities=9% Similarity=-0.016 Sum_probs=71.1
Q ss_pred HhHHHHHHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCce-EEEEEcCCCCCch
Q 025754 17 YEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFI-AEFFEADPCAENF 95 (248)
Q Consensus 17 ~~~~~~~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~-~~~~~~d~~~~~~ 95 (248)
.|++...++..+ .+..+||+|.|.-.=...+.. +...|+.+|+-|-+-- ...+... ..|++.|-....+
T Consensus 815 Yn~~~~s~~~~~--~~~~~lDLGTGPEcRiLsliP-~~~pvtmvD~RP~ae~-------~~~w~~~~T~yi~~DYl~~~~ 884 (1299)
T 3iyl_W 815 YNSFISEQTRNP--NLAHLLDLGTGPECRILSLIP-PTLQVTMSDSRPCAEL-------MASFDPALTAYVQGDYSTAAF 884 (1299)
T ss_dssp TTTHHHHHHTCG--GGCSEEEETCCSSCSGGGSSC-TTSCEEEEESSCCSSC-------GGGBCTTTEEEEESCSSSGGG
T ss_pred hhheehhcccCC--CCCEEEEcCCCccceeeecCC-CCCceEEEecCCcccc-------ccccccccceeEEecccccee
Confidence 465544433322 247899999998532222222 2237999998775321 1222334 6899999887666
Q ss_pred hhhhcccCCceeEEEeccchhhhcC-CHHHHHHHHHHHhccccCCcE--EEEE
Q 025754 96 ETQMQEKANQADLVCCFQHLQMCFE-TEERARRLLQNVSSLLKPGGY--FLGI 145 (248)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~~~~l~~~~~~LkpgG~--~i~~ 145 (248)
. ...++|+++|.+++...+- ..-.+.+.++++.+.+++.|. +++.
T Consensus 885 ~-----~~~~~d~vtailSLGAA~a~a~~tl~~~l~~~l~~~~~~~v~~l~lQ 932 (1299)
T 3iyl_W 885 W-----NGIRCDSATAIFTIGAAAAAAGTDLIAFVQQLIPRIVAAGGTRMWLQ 932 (1299)
T ss_dssp G-----SSCCCSEEEETTTHHHHHHHTTCCHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred E-----ecCCCCEEEEeeechhhhhhCCCcHHHHHHHHHHHHHhcCceEEEEE
Confidence 4 3568999999998764322 122467888888888887774 4444
No 396
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.69 E-value=2.2 Score=37.56 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=59.4
Q ss_pred CCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
.++|+=+|||. |..+...+......|+.+|.+++.++.+..++. +..+++|.++....... .-...|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~-------~~~i~Gd~~~~~~L~~A--gi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD-------LRVVNGHASHPDVLHEA--GAQDADMLV 73 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS-------CEEEESCTTCHHHHHHH--TTTTCSEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC-------cEEEEEcCCCHHHHHhc--CCCcCCEEE
Confidence 46788888885 544433333322389999999999887765532 66899999886653322 345789886
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
+.- . .+...-+...+.+.+.+.-..+...-+
T Consensus 74 a~t------~-~De~Nl~~~~~Ak~~~~~~~~iar~~~ 104 (461)
T 4g65_A 74 AVT------N-TDETNMAACQVAFTLFNTPNRIARIRS 104 (461)
T ss_dssp ECC------S-CHHHHHHHHHHHHHHHCCSSEEEECCC
T ss_pred EEc------C-ChHHHHHHHHHHHHhcCCccceeEecc
Confidence 532 1 222333344444444444444444333
No 397
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=84.22 E-value=4.1 Score=32.62 Aligned_cols=84 Identities=15% Similarity=-0.018 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
.+.++|=-|++.|- .+..++..+. +|+.+|.++..++...+..........+.++.+|+.+..-...+.+.-++.|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 45677877765541 2233444465 8999999998887766655543323457889999977543222222346789
Q ss_pred EEEeccch
Q 025754 108 LVCCFQHL 115 (248)
Q Consensus 108 ~V~~~~~l 115 (248)
+++...+.
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 98876543
No 398
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=84.20 E-value=0.54 Score=38.60 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=33.8
Q ss_pred CCceeEEEeccch-----hhh--cCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 103 ANQADLVCCFQHL-----QMC--FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 103 ~~~fD~V~~~~~l-----~~~--~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
.+++|+|++.++. ||. .++...+..++.-...+|+|||.|++-....
T Consensus 204 ~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg 257 (320)
T 2hwk_A 204 VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY 257 (320)
T ss_dssp SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC
T ss_pred cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 3679999997644 322 3333445567888899999999999986554
No 399
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=83.87 E-value=15 Score=29.44 Aligned_cols=112 Identities=14% Similarity=-0.029 Sum_probs=64.1
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCCh-HHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVAT-SGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~-~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.++|=.|++.|- .+..++..+. +|+.+|.+. ..++...+.....+ .++.++++|+.+..-... ..+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57788988877652 2234444565 788886654 44554444443322 348889999987432111 1112
Q ss_pred CCceeEEEeccchhhh----cCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~----~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
.++.|+++...+.... -.+.++.+ .+++.+...|+++|.++..
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3578998876543211 01233332 3456667777888887766
No 400
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=83.79 E-value=2.1 Score=35.83 Aligned_cols=94 Identities=20% Similarity=0.032 Sum_probs=57.7
Q ss_pred cCCCCeEEEEcC-C-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc--cCC
Q 025754 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (248)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (248)
+.++.+||=+|+ | .|..+..++.....+|+++ .+++-++.+++. + +..+. ...++...+.. ...
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----G----a~~i~---~~~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----G----ATPID---ASREPEDYAAEHTAGQ 215 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----T----SEEEE---TTSCHHHHHHHHHTTS
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----C----CCEec---cCCCHHHHHHHHhcCC
Confidence 348899999994 4 3666666665533489999 888877776542 2 22222 22333222211 234
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+|+|+.... . ..+....+.|+++|.++..
T Consensus 216 g~D~vid~~g------~-----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 216 GFDLVYDTLG------G-----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp CEEEEEESSC------T-----HHHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC------c-----HHHHHHHHHHhcCCeEEEE
Confidence 7999976432 1 2466677789999998865
No 401
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=83.78 E-value=1.9 Score=39.80 Aligned_cols=123 Identities=14% Similarity=0.241 Sum_probs=68.3
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-----------CC--CeEEEEeC---ChHHHHHHHHHHHh-----------c-----C
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-----------LI--ANYIGIDV---ATSGIGEARDTWEN-----------Q-----R 78 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-----------~~--~~v~giDi---s~~~l~~a~~~~~~-----------~-----~ 78 (248)
+..+|||+|-|+|......... .. -++++++. +++.+..+-..+.. - +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 4468999999999766443221 11 26899998 77777644332110 0 0
Q ss_pred --------CCceEEEEEcCCCCCchhhhhcc-cCCceeEEEecc-chhhhcCCHHHHHHHHHHHhccccCCcEEEEEecC
Q 025754 79 --------KNFIAEFFEADPCAENFETQMQE-KANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (248)
Q Consensus 79 --------~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 148 (248)
....+.+..+|+.+ ..+.+.. ....+|+|+.-. +... .+.-....++..+.++++|||.+. +...
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~--~l~~~~~~~~~~~d~~~~D~f~p~~--np~~w~~~~~~~l~~~~~~g~~~~-t~~~ 220 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINE--LTSQLDDSLNQKVDAWFLDGFAPAK--NPDMWTQNLFNAMARLARPGGTLA-TFTS 220 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHH--HGGGBCGGGTTCEEEEEECCSCGGG--CGGGSCHHHHHHHHHHEEEEEEEE-ESCC
T ss_pred ceEEEecCCcEEEEEecCCHHH--HHHhcccccCCcccEEEECCCCCcC--ChhhhhHHHHHHHHHHhCCCCEEE-eccC
Confidence 01234556666532 1111110 146799997743 2111 111124678899999999999875 4444
Q ss_pred hhHHHHHHHH
Q 025754 149 SSTIWAKYQK 158 (248)
Q Consensus 149 ~~~~~~~~~~ 158 (248)
...+.+.+.+
T Consensus 221 ~~~vr~~L~~ 230 (676)
T 3ps9_A 221 AGFVRRGLQD 230 (676)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 4555555554
No 402
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.22 E-value=28 Score=32.05 Aligned_cols=166 Identities=13% Similarity=0.107 Sum_probs=93.7
Q ss_pred CCCeEEEEcCCCCccHhHHHHc-C------CCeEEEEeCChHHHHHHH-HHHHhcC--------------C---------
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA-L------IANYIGIDVATSGIGEAR-DTWENQR--------------K--------- 79 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~-~------~~~v~giDis~~~l~~a~-~~~~~~~--------------~--------- 79 (248)
+...|+-||||-=.....+... + ...+.-+|++-..+-..+ +.+.... .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 3467999999876544444333 1 124555555544333333 3332110 0
Q ss_pred CceEEEEEcCCCCC-chhhhhcc----cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE-ecCh----
Q 025754 80 NFIAEFFEADPCAE-NFETQMQE----KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI-TPDS---- 149 (248)
Q Consensus 80 ~~~~~~~~~d~~~~-~~~~~~~~----~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~-~~~~---- 149 (248)
..+..++.+|+.+. .+...+.. .....-++++-.++.| .+.+...++++.+.+. ++|.+++. ..+.
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Y--l~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~ 262 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAY--MKPERSDSIIEATSKM--ENSHFIILEQLIPKGPF 262 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGG--SCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEE--cCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCC
Confidence 02478899999874 22222221 1234557777788888 6788899999999864 67766654 2222
Q ss_pred hHHHHHHHHhHhhhhCCCCCCCCCCCCCcccCceeEEEecccCCCCCcceeeeEEEEccCccCCCcceechHHHHHHHHH
Q 025754 150 STIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLARE 229 (248)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~ 229 (248)
+...+.+.++... .|.. +. +. ....+.+...+.+.+
T Consensus 263 d~f~~~m~~~~~~------------~g~~---------------------------l~-~~----~~~~~~~~~~~~~~~ 298 (695)
T 2zwa_A 263 EPFSKQMLAHFKR------------NDSP---------------------------LQ-SV----LKYNTIESQVQRFNK 298 (695)
T ss_dssp SHHHHHHHHHHHH------------TTCC---------------------------CC-GG----GTCCSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHH------------cCCC---------------------------CC-cc----ccCCCHHHHHHHHHH
Confidence 3333333332211 0100 00 00 122367788899999
Q ss_pred cCcEEEEecCchHHH
Q 025754 230 AGLEYVEIQNLNEFY 244 (248)
Q Consensus 230 ~G~~~v~~~~f~~~~ 244 (248)
+||+.+...++.+.|
T Consensus 299 ~Gw~~v~~~~~~~~y 313 (695)
T 2zwa_A 299 LGFAYVNVGDMFQLW 313 (695)
T ss_dssp TTCCEEEEEEHHHHH
T ss_pred CCCCCcceeeHHHHH
Confidence 999988888888877
No 403
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=82.97 E-value=8.2 Score=30.88 Aligned_cols=83 Identities=10% Similarity=-0.001 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCC---ccHhHHHHcCCCeEEEEeCC------------hHHHHHHHHHHHhcCCCceEEEEEcCCCCCch
Q 025754 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~l~~~~~~~v~giDis------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
.+.+||=-|++.| ..+..++..+. +|+.+|.+ ++.++...+.....+ .++.++++|+.+..-
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 4678888886654 22234444565 89999987 566655544443332 358899999987432
Q ss_pred hhh----hcccCCceeEEEeccchh
Q 025754 96 ETQ----MQEKANQADLVCCFQHLQ 116 (248)
Q Consensus 96 ~~~----~~~~~~~fD~V~~~~~l~ 116 (248)
... .....++.|+++...+..
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111 111235789998876543
No 404
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=82.61 E-value=12 Score=29.51 Aligned_cols=79 Identities=11% Similarity=-0.034 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCCC---ccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.+||=.|++.| ..+..++..+. +|+.+|.+++.++...+.... ++.++++|+.+..-.. ...+..
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGP-----AAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC-----CceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 4567888886654 12234444565 899999998877766554421 3788999998744211 111234
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 81 g~id~lv~~Ag~ 92 (259)
T 4e6p_A 81 GGLDILVNNAAL 92 (259)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 579998886654
No 405
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.27 E-value=6.3 Score=31.22 Aligned_cols=81 Identities=10% Similarity=-0.077 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.+++.++.+.+.+...+ .++.++++|+.+..-.. .....
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 46678888877652 2234444565 89999999998887777665443 35889999998753211 12223
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 82 g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 APLEVTIFNVGA 93 (252)
T ss_dssp SCEEEEEECCCC
T ss_pred CCceEEEECCCc
Confidence 689998876654
No 406
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=82.25 E-value=1.5 Score=36.25 Aligned_cols=90 Identities=12% Similarity=0.009 Sum_probs=55.1
Q ss_pred eEEEEcC-C-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEEe
Q 025754 34 TVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (248)
Q Consensus 34 ~VLDlGc-G-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (248)
+||=.|+ | .|..+..+++..-.+|+++|.+++-++.+++.-.. ..+-..+... . ..+ ..+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------~vi~~~~~~~--~-~~~--~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGAN------RILSRDEFAE--S-RPL--EKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCS------EEEEGGGSSC--C-CSS--CCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC------EEEecCCHHH--H-Hhh--cCCCccEEEE
Confidence 4999997 4 36666666665334899999999988888653111 1111111110 0 001 2357998865
Q ss_pred ccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.. .. ..++.+.+.|+++|.++..
T Consensus 218 ~~-------g~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 218 TV-------GD----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp SS-------CH----HHHHHHHHTEEEEEEEEEC
T ss_pred CC-------Cc----HHHHHHHHHHhcCCEEEEE
Confidence 32 11 1577788899999999876
No 407
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=82.05 E-value=2 Score=36.37 Aligned_cols=96 Identities=21% Similarity=0.139 Sum_probs=56.6
Q ss_pred cC-CCCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 29 SH-PYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 29 ~~-~~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
.. ++.+||=+|+|. |..+..++.....+|+++|.+++.++.+.+.+ +. ...+ |..+.. .+....+.+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga---~~v~--~~~~~~---~~~~~~~~~ 252 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GA---DSFL--VSRDQE---QMQAAAGTL 252 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CC---SEEE--ETTCHH---HHHHTTTCE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CC---ceEE--eccCHH---HHHHhhCCC
Confidence 45 789999999864 55555555543348999999998877665332 10 1122 222211 111123479
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
|+|+....... .++...+.|+++|.++..
T Consensus 253 D~vid~~g~~~----------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 253 DGIIDTVSAVH----------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEEECCSSCC----------CSHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCcHH----------HHHHHHHHHhcCCEEEEE
Confidence 99976543211 233455678999998865
No 408
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=82.02 E-value=0.9 Score=38.39 Aligned_cols=95 Identities=21% Similarity=0.119 Sum_probs=56.5
Q ss_pred cC-CCCeEEEEcCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 29 SH-PYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 29 ~~-~~~~VLDlGcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
.. ++.+||=+|+|. |..+..++.. +. +|+++|.+++-++.+++.+... ..+.. .+.+ .+....+.
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~------~vi~~--~~~~---~~~~~~~g 244 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGAD------DYVIG--SDQA---KMSELADS 244 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCS------CEEET--TCHH---HHHHSTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCc------eeecc--ccHH---HHHHhcCC
Confidence 45 889999999864 5555555554 55 8999999988777665222110 11211 1111 11112347
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+...... ..++...+.|+++|.++..
T Consensus 245 ~D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 245 LDYVIDTVPVH----------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEEEECCCSC----------CCSHHHHTTEEEEEEEEEC
T ss_pred CCEEEECCCCh----------HHHHHHHHHhccCCEEEEe
Confidence 99997644221 1244566799999998876
No 409
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=81.91 E-value=12 Score=30.26 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=64.1
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCCh--HHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVAT--SGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQE 101 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~--~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~ 101 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.+. ...+...+.....+ .++.++++|+.+..-.. ...+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45788888876542 2233444455 899988873 33444444333322 34888999998743211 1111
Q ss_pred cCCceeEEEeccchhhhc-----CCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQMCF-----ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~-----~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
..+..|+++...+..... .+.++.+ .+++.+...++++|.++.+
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 235789988766542110 1233333 3556677788888988876
No 410
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=81.78 E-value=16 Score=29.09 Aligned_cols=112 Identities=12% Similarity=-0.079 Sum_probs=63.8
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCC-hHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA-TSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis-~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.++|=.|++.|- .+..++..+. +|+.++.. ...++...+.....+ .++.++++|+.+..-... ....
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46778888866542 2234444465 78887764 455555544444332 358899999987432111 1112
Q ss_pred CCceeEEEeccchhhh----cCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~----~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
.++.|+++...+.... -.+.++.+ .+++.+...|+++|.++..
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 3578998876544211 01333332 3455677778888888776
No 411
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=81.52 E-value=13 Score=29.89 Aligned_cols=79 Identities=11% Similarity=-0.015 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.+++.++.+.+... .++.++++|+.+..-... ..+..
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIG-----CGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHC-----SSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcC-----CcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 46678877766552 2234444565 89999999988776655541 237889999987532111 11123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578998876654
No 412
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=81.15 E-value=15 Score=29.05 Aligned_cols=112 Identities=13% Similarity=-0.007 Sum_probs=64.5
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEE-eCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGI-DVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~gi-Dis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.+||=-|++.|- .+..++..+. +|+.+ +.++...+.+.+.....+ .++.++++|+.+..-... ....
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46778888876652 2234444565 77777 777777666655554432 347889999987432111 1112
Q ss_pred CCceeEEEeccchh-h--hc--CCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQ-M--CF--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~-~--~~--~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
-++.|+++...+.. . .+ .+.+..+ .+++.+...|+++|.++..
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 35789888765432 0 00 1233222 3555666777778887766
No 413
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.98 E-value=5.5 Score=31.11 Aligned_cols=99 Identities=9% Similarity=-0.078 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCCCccHhHHHHc---CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 31 PYVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~---~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
...+|+=+|||. ....++.. ... |+++|.+++.++.+. .+ +.++.+|..+....... .-...|
T Consensus 8 ~~~~viI~G~G~--~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~----~~~i~gd~~~~~~l~~a--~i~~ad 73 (234)
T 2aef_A 8 KSRHVVICGWSE--STLECLRELRGSEV-FVLAEDENVRKKVLR-----SG----ANFVHGDPTRVSDLEKA--NVRGAR 73 (234)
T ss_dssp --CEEEEESCCH--HHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TT----CEEEESCTTCHHHHHHT--TCTTCS
T ss_pred CCCEEEEECCCh--HHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cC----CeEEEcCCCCHHHHHhc--Ccchhc
Confidence 356788888864 33333332 223 999999998776554 22 67899999765432211 235688
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+|++.. .+. .....+....+.+.|+..++....+..
T Consensus 74 ~vi~~~------~~d-~~n~~~~~~a~~~~~~~~iia~~~~~~ 109 (234)
T 2aef_A 74 AVIVDL------ESD-SETIHCILGIRKIDESVRIIAEAERYE 109 (234)
T ss_dssp EEEECC------SCH-HHHHHHHHHHHHHCSSSEEEEECSSGG
T ss_pred EEEEcC------CCc-HHHHHHHHHHHHHCCCCeEEEEECCHh
Confidence 887643 222 233444455666788878777755543
No 414
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=80.88 E-value=15 Score=28.91 Aligned_cols=111 Identities=9% Similarity=-0.059 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCCCccHh----HHHH-cCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-hh---cc
Q 025754 31 PYVTVCDLYCGAGVDVD----KWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-QM---QE 101 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~l~~-~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~ 101 (248)
++.+||=.|+ +|+... .++. .+. +|++++.++..++...+.....+ .++.++.+|+.+..-.. .+ ..
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHH
Confidence 3566776664 444433 3344 455 89999999887766655554332 24788999998743211 11 11
Q ss_pred cCCceeEEEeccchhhh---cCC-HHHH-----------HHHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQMC---FET-EERA-----------RRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~---~~~-~~~~-----------~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+..|+|+...+.... ... .++. ..+++.+...++++|.++..
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 12478988876543210 011 1222 23555666777777887766
No 415
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=80.78 E-value=4.1 Score=35.53 Aligned_cols=45 Identities=20% Similarity=0.158 Sum_probs=34.6
Q ss_pred CCeEEEEcCCCCccHhHHHHc----C--CCeEEEEeCChHHHHHHHHHHHh
Q 025754 32 YVTVCDLYCGAGVDVDKWETA----L--IANYIGIDVATSGIGEARDTWEN 76 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~----~--~~~v~giDis~~~l~~a~~~~~~ 76 (248)
...|+|+|.|+|.++..++.. . ..++..+++|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 479999999999977665432 1 34899999999988777766653
No 416
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.72 E-value=12 Score=29.68 Aligned_cols=81 Identities=7% Similarity=-0.106 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCCCccH----hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYCGAGVDV----DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~----~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.+||=.|++.| .. ..++..+. +|+.+|.+++.++...+.....+ .++.++.+|+.+..-... +...
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 28 SGQVAVVTGASRG-IGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 5678888886654 33 33344455 89999999988887766665433 358899999987432111 1112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+++...+.
T Consensus 104 ~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 104 HGRCDVLVNNAGV 116 (262)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3578998876654
No 417
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=80.63 E-value=1.4 Score=42.79 Aligned_cols=54 Identities=19% Similarity=0.235 Sum_probs=41.2
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCC
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADP 90 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~ 90 (248)
+..+++||-||.|++...+..+++ ..+.++|+++.+++.-+..+.. ..++..|+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~------~~~~~~DI 593 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPG------STVFTEDC 593 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTT------SEEECSCH
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC------CccccccH
Confidence 456899999999999999988886 5688999999988765544332 34566664
No 418
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=80.28 E-value=20 Score=28.25 Aligned_cols=111 Identities=9% Similarity=-0.096 Sum_probs=65.3
Q ss_pred CCCeEEEEcCC-CCccHh----HHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcc
Q 025754 31 PYVTVCDLYCG-AGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQE 101 (248)
Q Consensus 31 ~~~~VLDlGcG-~G~~~~----~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~ 101 (248)
++.+||=.|++ +|+... .++..+. +|+.++.+....+.+++.....+ ++.++.+|+.+..-.. ....
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHH
Confidence 57889988865 233333 3344455 89999988765555544433332 2678999998743211 1112
Q ss_pred cCCceeEEEeccchhhh-------c--CCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQMC-------F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~-------~--~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
..++.|+++...+.... . .+.+... .+++.+...|+++|.++..
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 152 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTL 152 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEE
Confidence 34679998876654321 0 2333333 3455666777778887766
No 419
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=80.05 E-value=5 Score=33.07 Aligned_cols=92 Identities=11% Similarity=-0.008 Sum_probs=55.4
Q ss_pred cCCCCeEEEEc-CCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCc-hhhhhcccCCc
Q 025754 29 SHPYVTVCDLY-CGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN-FETQMQEKANQ 105 (248)
Q Consensus 29 ~~~~~~VLDlG-cG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~ 105 (248)
+.++.+||=+| +|. |..+..+++....++++++ ++..++.+++. +. ...+ |..+.+ +.+ .-..
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~l----Ga---~~~i--~~~~~~~~~~----~~~g 215 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKAL----GA---EQCI--NYHEEDFLLA----ISTP 215 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHH----TC---SEEE--ETTTSCHHHH----CCSC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHc----CC---CEEE--eCCCcchhhh----hccC
Confidence 45899999996 664 6666666665334899987 55546555442 21 1122 222233 322 1257
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+.... . . .+....++|+++|.++..
T Consensus 216 ~D~v~d~~g-------~---~-~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 216 VDAVIDLVG-------G---D-VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEEESSC-------H---H-HHHHHGGGEEEEEEEEEC
T ss_pred CCEEEECCC-------c---H-HHHHHHHhccCCCEEEEe
Confidence 999975432 1 1 236678999999999876
No 420
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=79.70 E-value=18 Score=28.56 Aligned_cols=84 Identities=7% Similarity=-0.045 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-hh---cccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-QM---QEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.++..++.+.+.........++.++.+|+.+..-.. .+ ....
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 35678888865541 2233444455 899999998776655444432111124788999998743211 11 1122
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 85 g~id~lv~~Ag~ 96 (267)
T 2gdz_A 85 GRLDILVNNAGV 96 (267)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 568998877653
No 421
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=79.62 E-value=6 Score=31.03 Aligned_cols=79 Identities=8% Similarity=-0.014 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
++.+||=.|++.|- .+..++..+. +|+.+|.++..++...+.... ++.+..+|+.+..-...+....+..|
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKD-----NYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCS-----SEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhcc-----CccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 57788888876541 2233444465 899999999887766554432 37888999977443222222335789
Q ss_pred EEEeccch
Q 025754 108 LVCCFQHL 115 (248)
Q Consensus 108 ~V~~~~~l 115 (248)
+++...+.
T Consensus 87 ~li~~Ag~ 94 (249)
T 3f9i_A 87 ILVCNAGI 94 (249)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 98876654
No 422
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=79.62 E-value=14 Score=29.35 Aligned_cols=84 Identities=7% Similarity=-0.147 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.++|=-|++.|- .+..++..+. +|+.+|.+++.++.+.+.........++.++++|+.+..-.. ......
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 46778888877652 2234444565 899999999888877666554221224888999998743211 111123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++.....
T Consensus 86 g~id~lvnnAg~ 97 (265)
T 3lf2_A 86 GCASILVNNAGQ 97 (265)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578988876654
No 423
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=79.44 E-value=14 Score=29.72 Aligned_cols=82 Identities=7% Similarity=-0.020 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeC-ChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDi-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.++|=-|++.|- .+..++..+. +|+.+|. +++.++...+.....+ .++.++++|+.+..-... ..+.
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46778888876642 2233444455 8999996 6666666555544332 358899999987542211 1112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+++...+.
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 3578998877654
No 424
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=79.17 E-value=7.8 Score=30.42 Aligned_cols=82 Identities=7% Similarity=-0.070 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCCC---ccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
.+.+||=.|++.| ..+..++..+. +|+.+|.+++.++...+.....+ .++.++++|+.+..-... ..+..
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4677888887654 12234444565 89999999998887766665432 358889999987432111 11123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478998877654
No 425
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=78.94 E-value=2.6 Score=35.20 Aligned_cols=63 Identities=14% Similarity=0.146 Sum_probs=40.6
Q ss_pred EEEEEcCCCCCchhhhhcccCCceeEEEeccchhhh----cC------CHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 83 AEFFEADPCAENFETQMQEKANQADLVCCFQHLQMC----FE------TEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 83 ~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~----~~------~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
..++++|+.+. ...+ +++++|+|++.--.... .. -...+...+.++.++|+|||.+++.+.+.
T Consensus 15 ~~ii~gD~~~~--l~~l--~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 15 GSMYIGDSLEL--LESF--PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp EEEEESCHHHH--GGGS--CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ceEEeCcHHHH--HhhC--CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 67788887431 1112 36789999885321100 00 02357788999999999999999986654
No 426
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.84 E-value=7.1 Score=31.88 Aligned_cols=82 Identities=12% Similarity=0.010 Sum_probs=53.4
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.++..++.+.+.+...+ .++.++++|+.+..-... .....
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 46788888877652 2233444465 89999999998888777665433 358899999987432111 11123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
+..|+++...+.
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578998877653
No 427
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=78.71 E-value=3.8 Score=34.64 Aligned_cols=70 Identities=14% Similarity=0.028 Sum_probs=43.4
Q ss_pred CCCeEEEEcCCC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 31 PYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
...+||=||||. |......+.... +++..|++...++.+++. +..++.|+.+..-... .-...|+|
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~~-~v~~~~~~~~~~~~~~~~---------~~~~~~d~~d~~~l~~---~~~~~DvV 81 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDEF-DVYIGDVNNENLEKVKEF---------ATPLKVDASNFDKLVE---VMKEFELV 81 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTTS-EEEEEESCHHHHHHHTTT---------SEEEECCTTCHHHHHH---HHTTCSEE
T ss_pred CccEEEEECCCHHHHHHHHHHhcCC-CeEEEEcCHHHHHHHhcc---------CCcEEEecCCHHHHHH---HHhCCCEE
Confidence 456899999973 554444444444 899999998887765432 4456788765332111 12457988
Q ss_pred Eecc
Q 025754 110 CCFQ 113 (248)
Q Consensus 110 ~~~~ 113 (248)
++..
T Consensus 82 i~~~ 85 (365)
T 3abi_A 82 IGAL 85 (365)
T ss_dssp EECC
T ss_pred EEec
Confidence 7753
No 428
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=78.39 E-value=7.6 Score=30.96 Aligned_cols=79 Identities=18% Similarity=0.100 Sum_probs=46.9
Q ss_pred CCCeEEEEcCCC-CccH-hHHHHcCCCeEEEEeCCh-------------------HHHHHHHHHHHhcCCCceEEEEEcC
Q 025754 31 PYVTVCDLYCGA-GVDV-DKWETALIANYIGIDVAT-------------------SGIGEARDTWENQRKNFIAEFFEAD 89 (248)
Q Consensus 31 ~~~~VLDlGcG~-G~~~-~~l~~~~~~~v~giDis~-------------------~~l~~a~~~~~~~~~~~~~~~~~~d 89 (248)
.+.+||=+|||. |..+ ..++..+.++++-+|.+. .-.+.+.+++...+...++..+..+
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 109 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 109 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 357899999984 4333 344556888999999886 4455555555543323345555555
Q ss_pred CCCCchhhhhcccCCceeEEEecc
Q 025754 90 PCAENFETQMQEKANQADLVCCFQ 113 (248)
Q Consensus 90 ~~~~~~~~~~~~~~~~fD~V~~~~ 113 (248)
+......+. -..+|+|+...
T Consensus 110 ~~~~~~~~~----~~~~DvVi~~~ 129 (249)
T 1jw9_B 110 LDDAELAAL----IAEHDLVLDCT 129 (249)
T ss_dssp CCHHHHHHH----HHTSSEEEECC
T ss_pred CCHhHHHHH----HhCCCEEEEeC
Confidence 543222211 13689987643
No 429
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=77.93 E-value=20 Score=28.56 Aligned_cols=84 Identities=11% Similarity=-0.066 Sum_probs=53.0
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCC-CceEEEEEcCCCCCchhh----hhccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRK-NFIAEFFEADPCAENFET----QMQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~~----~~~~~ 102 (248)
.+.+||=-|++.|- .+..++..+. +|+.+|.+++.++.+.+.....+. ..++.++++|+.+..-.. .....
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46778888866541 2234444565 899999999988877666654321 125889999998743211 11112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+++...+.
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3578988876654
No 430
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.74 E-value=14 Score=29.23 Aligned_cols=81 Identities=7% Similarity=-0.054 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.++|=.|++.|- .+..++..+. +|+.+|.+++.++...+.....+ .++.++++|+.+..-.. ......
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778888876652 2234444565 89999999998887766665433 35889999998754211 111234
Q ss_pred CceeEEEeccc
Q 025754 104 NQADLVCCFQH 114 (248)
Q Consensus 104 ~~fD~V~~~~~ 114 (248)
++.|+++....
T Consensus 87 g~id~lv~nAg 97 (264)
T 3ucx_A 87 GRVDVVINNAF 97 (264)
T ss_dssp SCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 67899887653
No 431
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=77.74 E-value=2.8 Score=35.03 Aligned_cols=98 Identities=9% Similarity=-0.035 Sum_probs=62.1
Q ss_pred CCeEEEEcCCC--CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhc-------CCC-c---------eEEEEEcCCCC
Q 025754 32 YVTVCDLYCGA--GVDVDKWETALIANYIGIDVATSGIGEARDTWENQ-------RKN-F---------IAEFFEADPCA 92 (248)
Q Consensus 32 ~~~VLDlGcG~--G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~-------~~~-~---------~~~~~~~d~~~ 92 (248)
..+|.=||+|+ .+++..++..+. .|+..|++++.++.+.++.... +.. . ++.+ ..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~---- 79 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CT---- 79 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-EC----
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-cc----
Confidence 46799999997 234455556677 8999999999998877654321 100 0 0111 01
Q ss_pred CchhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 93 ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 93 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++.+ .-...|+|+= .+++..+--+++++++-++++|+.+|.-.
T Consensus 80 -~l~~----a~~~ad~ViE-----av~E~l~iK~~lf~~l~~~~~~~aIlaSN 122 (319)
T 3ado_A 80 -NLAE----AVEGVVHIQE-----CVPENLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp -CHHH----HTTTEEEEEE-----CCCSCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred -chHh----HhccCcEEee-----ccccHHHHHHHHHHHHHHHhhhcceeehh
Confidence 1111 1234677632 24578888899999999999998876543
No 432
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=77.68 E-value=6 Score=34.50 Aligned_cols=99 Identities=14% Similarity=0.083 Sum_probs=58.5
Q ss_pred cCCCCeEEEEcC-CC-CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCC-------------
Q 025754 29 SHPYVTVCDLYC-GA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE------------- 93 (248)
Q Consensus 29 ~~~~~~VLDlGc-G~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~------------- 93 (248)
+.++.+||=+|+ |. |..+..++.....++++++.++.-++.+++.-. ...+...-.+.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGA-------EAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC-------CEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC-------cEEEecCcCcccccccccccchHH
Confidence 458899999997 43 666666666544489999999888887754311 11221111000
Q ss_pred --chhhhhcc--cCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 94 --NFETQMQE--KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 94 --~~~~~~~~--~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
.+...+.. ....+|+|+-... . ..+....++|++||.++..
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~G-------~----~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHPG-------R----ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECSC-------H----HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcCC-------c----hhHHHHHHHhhCCcEEEEE
Confidence 00011111 1347999975432 1 2466677899999999875
No 433
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=77.65 E-value=11 Score=29.45 Aligned_cols=81 Identities=6% Similarity=-0.002 Sum_probs=51.5
Q ss_pred CCeEEEEcCCCC---ccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccCC
Q 025754 32 YVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (248)
Q Consensus 32 ~~~VLDlGcG~G---~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~ 104 (248)
+.+||=.|++.| ..+..++..+. +|+.++.++..++...+.....+ .++.++++|+.+..-.. ......+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567777776544 12234444465 89999999988887766655433 35889999998743211 1222345
Q ss_pred ceeEEEeccch
Q 025754 105 QADLVCCFQHL 115 (248)
Q Consensus 105 ~fD~V~~~~~l 115 (248)
+.|+++...+.
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78998876543
No 434
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=77.57 E-value=1.7 Score=40.89 Aligned_cols=54 Identities=15% Similarity=0.143 Sum_probs=39.6
Q ss_pred CCCeEEEEcCCCCccHhHHHHcC------CCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCC
Q 025754 31 PYVTVCDLYCGAGVDVDKWETAL------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADP 90 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~------~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~ 90 (248)
+..+|+||-||.|+++.-+...+ +.-+.++|+++.+++.-+..+.. ....+.|+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~------~~~~~~di 270 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ------TEVRNEKA 270 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT------SEEEESCH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC------CceecCcH
Confidence 44689999999999998886654 55688999999988765555432 34555554
No 435
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=76.84 E-value=17 Score=29.04 Aligned_cols=82 Identities=11% Similarity=0.034 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCC----------------hHHHHHHHHHHHhcCCCceEEEEEcCCC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA----------------TSGIGEARDTWENQRKNFIAEFFEADPC 91 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis----------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~ 91 (248)
.+.++|=-|++.|- .+..++..+. +|+.+|.+ ++.++...+.....+ .++.++++|+.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCCC
Confidence 46778888877652 2234444465 89999987 555655554444332 35889999998
Q ss_pred CCchhhh----hcccCCceeEEEeccch
Q 025754 92 AENFETQ----MQEKANQADLVCCFQHL 115 (248)
Q Consensus 92 ~~~~~~~----~~~~~~~fD~V~~~~~l 115 (248)
+..-... ..+..++.|+++...+.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 7432111 11123578998887654
No 436
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=76.78 E-value=33 Score=28.98 Aligned_cols=110 Identities=10% Similarity=-0.009 Sum_probs=68.0
Q ss_pred HHHHHHhcC--CCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCc-eEEEEEcCCCCCchhhh
Q 025754 22 TALIKIYSH--PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQ 98 (248)
Q Consensus 22 ~~li~~~~~--~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~ 98 (248)
..|++.... .+.+||.++.+.|..+..++.. .++.+.=|-.+-...+.....++... .+.+...-
T Consensus 27 ~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~--------- 94 (375)
T 4dcm_A 27 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDST--------- 94 (375)
T ss_dssp HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETT---------
T ss_pred HHHHHhhhhccCCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEecccc---------
Confidence 345555432 5578999999999887776544 33444324444434444444433211 13443221
Q ss_pred hcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
......+|+|+... -.+...+...+..+...|+||+.+++...+.
T Consensus 95 -~~~~~~~~~v~~~l-----pk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 95 -ADYPQQPGVVLIKV-----PKTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp -SCCCSSCSEEEEEC-----CSCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred -cccccCCCEEEEEc-----CCCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 11356899986644 2567778899999999999999998876555
No 437
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=76.58 E-value=12 Score=29.79 Aligned_cols=112 Identities=11% Similarity=0.007 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEE-eCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGI-DVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~gi-Dis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.++|=-|++.|- .+..++..+. +|+.+ +.++...+...+.....+ .++.++++|+.+..-... ....
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57788888876652 2234445566 77776 445555655555444332 348889999987432111 1112
Q ss_pred CCceeEEEeccchhhh----cCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~----~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
.++.|+++...+.... -.+.+..+ .+++.+...|+++|.++..
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 3579998876643210 01233232 3455666777778888776
No 438
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=76.51 E-value=21 Score=28.15 Aligned_cols=83 Identities=18% Similarity=0.068 Sum_probs=52.4
Q ss_pred CCCeEEEEcC-CCC--cc-HhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYC-GAG--VD-VDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGc-G~G--~~-~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.+||=.|+ |.| .. +..++..+. +|+.+|.++..++...+...... ..++.++++|+.+..-... ..+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4677888886 454 22 234444565 89999999988887766664332 2358999999987432111 1112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+++...+.
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 3578998886654
No 439
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=76.43 E-value=18 Score=29.87 Aligned_cols=105 Identities=12% Similarity=0.042 Sum_probs=60.0
Q ss_pred CCeEEEEcCCC-C-ccHhHHHHcCCC-eEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 32 YVTVCDLYCGA-G-VDVDKWETALIA-NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 32 ~~~VLDlGcG~-G-~~~~~l~~~~~~-~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..+|.=||+|. | ..+..+...+.. +|++.|.+++.++.+.+. +. +.-...|..+. . -...|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~---~~~~~~~~~~~-~-------~~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI---IDEGTTSIAKV-E-------DFSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS---CSEEESCTTGG-G-------GGCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CC---cchhcCCHHHH-h-------hccCCE
Confidence 36899999986 3 333445444542 899999999888766532 21 10112222110 1 135788
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChhHHHHHHHH
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQK 158 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~ 158 (248)
|+..- +......+++++...+++|.+++-.......+.+.+.+
T Consensus 98 Vilav-------p~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~ 140 (314)
T 3ggo_A 98 VMLSS-------PVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN 140 (314)
T ss_dssp EEECS-------CGGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH
T ss_pred EEEeC-------CHHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHH
Confidence 86543 22335677888888899988765433333344444443
No 440
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=75.69 E-value=19 Score=29.14 Aligned_cols=82 Identities=13% Similarity=-0.037 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCC------------hHHHHHHHHHHHhcCCCceEEEEEcCCCCCch
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
.+.++|=-|++.|- .+..++..+. +|+.+|.+ ++.++.+.+.....+ .++.++++|+.+..-
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDA 103 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHH
Confidence 46778888877652 2234444465 89999987 556665555444332 358899999987432
Q ss_pred hhh----hcccCCceeEEEeccch
Q 025754 96 ETQ----MQEKANQADLVCCFQHL 115 (248)
Q Consensus 96 ~~~----~~~~~~~fD~V~~~~~l 115 (248)
... .....++.|+++...+.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 111 11123578998876543
No 441
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=75.54 E-value=11 Score=29.67 Aligned_cols=84 Identities=10% Similarity=-0.002 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCC-ceEEEEEcCCCCCchhh----hhccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFET----QMQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~----~~~~~ 102 (248)
.+.++|=.|++.|- .+..++..+. +|+.+|.+++.++.+.+........ .++.++.+|+.+..-.. .....
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 45678888876642 2234444566 8999999999888776665443211 34788999998743211 11112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+++...+.
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3579998887654
No 442
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=75.22 E-value=14 Score=30.64 Aligned_cols=98 Identities=8% Similarity=-0.091 Sum_probs=60.4
Q ss_pred CCeEEEEcCCCCccHhHHHHc---CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeE
Q 025754 32 YVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~---~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (248)
..+|+=+|+|. ....+++. ... ++.+|.+++.++ ++. .+ +.++++|..+....... .-...|.
T Consensus 115 ~~~viI~G~G~--~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~~----~~~i~gd~~~~~~L~~a--~i~~a~~ 180 (336)
T 1lnq_A 115 SRHVVICGWSE--STLECLRELRGSEV-FVLAEDENVRKK-VLR----SG----ANFVHGDPTRVSDLEKA--NVRGARA 180 (336)
T ss_dssp -CEEEEESCCH--HHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----TT----CEEEESCTTSHHHHHHT--CSTTEEE
T ss_pred cCCEEEECCcH--HHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----CC----cEEEEeCCCCHHHHHhc--ChhhccE
Confidence 45788888764 33444332 223 999999999887 542 22 67899999876543221 2457888
Q ss_pred EEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
|++.. .+. ...-......+.+.|...++....+..
T Consensus 181 vi~~~------~~d-~~n~~~~~~ar~~~~~~~iiar~~~~~ 215 (336)
T 1lnq_A 181 VIVDL------ESD-SETIHCILGIRKIDESVRIIAEAERYE 215 (336)
T ss_dssp EEECC------SSH-HHHHHHHHHHHTTCTTSEEEEECSSGG
T ss_pred EEEcC------Ccc-HHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 87643 222 334445556677788888877755543
No 443
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=75.19 E-value=18 Score=29.05 Aligned_cols=82 Identities=16% Similarity=0.064 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
++..||=.|++.|- .+..++..+. +|+.+|.+++.++.+.+.....+ .++.++++|+.+..-.. ......
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56788888876642 2233444465 89999999988887766654432 35889999998743211 111123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 104 g~iD~lVnnAg~ 115 (283)
T 3v8b_A 104 GHLDIVVANAGI 115 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578998876654
No 444
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=75.07 E-value=29 Score=27.50 Aligned_cols=83 Identities=10% Similarity=-0.055 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCCCccHh----HHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-hh---ccc
Q 025754 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-QM---QEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~~ 102 (248)
.+.+||=.|++.| ... .++..+. +|++++.++..++...+.....+...++.++.+|+.+..-.. .+ ...
T Consensus 31 ~~k~vlVTGasgg-IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASGG-IGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 3567888876543 333 3334455 899999998877766555544332235788999998743211 11 111
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.+..|+|+...+.
T Consensus 109 ~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 109 HSGVDICINNAGL 121 (279)
T ss_dssp HCCCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 2468988876543
No 445
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=74.88 E-value=6.9 Score=31.45 Aligned_cols=112 Identities=15% Similarity=0.095 Sum_probs=68.1
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchh----hhhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~ 103 (248)
++..+|=-|.+.|- .+..++..+. +|+.+|.+++.++.+.+.....+ .++..+++|+.+..-. +.....-
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 46777777766652 2234445565 89999999999988777665543 3588899999875322 1122245
Q ss_pred CceeEEEeccchhhh----cCCHHHHHH-----------HHHHHhccc---cCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMC----FETEERARR-----------LLQNVSSLL---KPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~----~~~~~~~~~-----------~l~~~~~~L---kpgG~~i~~ 145 (248)
++.|+++.+...... -.+.++.+. +.+.+.+.| +.+|.++..
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVni 144 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINI 144 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 789998886544221 013334433 334555555 246777766
No 446
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=74.57 E-value=5.7 Score=33.06 Aligned_cols=95 Identities=8% Similarity=-0.031 Sum_probs=58.2
Q ss_pred CeEEEEcCCC--CccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHh-------cCCC----------ceEEEEEcCCCCC
Q 025754 33 VTVCDLYCGA--GVDVDKWETALIANYIGIDVATSGIGEARDTWEN-------QRKN----------FIAEFFEADPCAE 93 (248)
Q Consensus 33 ~~VLDlGcG~--G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~-------~~~~----------~~~~~~~~d~~~~ 93 (248)
.+|-=||+|+ +.++..++..+. +|++.|.+++.++.+.++... .+.. .++.+ ..|
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~---- 80 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN---- 80 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC----
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCC----
Confidence 5688899986 234455555666 899999999999887664321 1100 00111 111
Q ss_pred chhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEE
Q 025754 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (248)
Q Consensus 94 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i 143 (248)
+.+ .-...|+|+..- .+..+....+++++...++|+.+++
T Consensus 81 -~~e----av~~aDlVieav-----pe~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 81 -LAE----AVEGVVHIQECV-----PENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp -HHH----HTTTEEEEEECC-----CSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred -HHH----HHhcCCEEEEec-----cCCHHHHHHHHHHHHhhCCCCeEEE
Confidence 111 124678886533 2345556788899999999988665
No 447
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=74.52 E-value=3.5 Score=34.52 Aligned_cols=95 Identities=12% Similarity=-0.024 Sum_probs=53.4
Q ss_pred CCC-CeEEEE-cCCC-CccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc--C
Q 025754 30 HPY-VTVCDL-YCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK--A 103 (248)
Q Consensus 30 ~~~-~~VLDl-GcG~-G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~ 103 (248)
.++ .+||=. |+|. |..+..++.. +. +|+++|.+++-++.+++.- . ...+ |..+.++...+.+. .
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~G--a-----~~~~--~~~~~~~~~~v~~~~~~ 231 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIG--A-----AHVL--NEKAPDFEATLREVMKA 231 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHT--C-----SEEE--ETTSTTHHHHHHHHHHH
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC--C-----CEEE--ECCcHHHHHHHHHHhcC
Confidence 345 455543 4442 4444455444 55 9999999999888876431 1 1122 22223333222111 1
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+..... + .+..+.+.|+++|.++..
T Consensus 232 ~g~D~vid~~g~-------~----~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 232 EQPRIFLDAVTG-------P----LASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HCCCEEEESSCH-------H----HHHHHHHHSCTTCEEEEC
T ss_pred CCCcEEEECCCC-------h----hHHHHHhhhcCCCEEEEE
Confidence 369999764421 1 235567889999999876
No 448
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=74.39 E-value=12 Score=29.73 Aligned_cols=84 Identities=13% Similarity=0.017 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCC---ccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-hh---cccC
Q 025754 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-QM---QEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~~~ 103 (248)
.+.+||=.|++.| ..+..++..+. +|+.+|.+++.++...+.........++.++++|+.+..-.. .+ ....
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4677888886654 12233444455 899999998877766555433211134788999998743211 11 1123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 91 g~id~lv~nAg~ 102 (267)
T 1iy8_A 91 GRIDGFFNNAGI 102 (267)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578998876543
No 449
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=74.06 E-value=20 Score=29.11 Aligned_cols=90 Identities=19% Similarity=0.159 Sum_probs=54.1
Q ss_pred CCeEEEEcCCC-Cc-cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 32 YVTVCDLYCGA-GV-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 32 ~~~VLDlGcG~-G~-~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
..+|.=||+|. |. .+..++..+. +|++.|.+++.++...+. + ......+..+ .-...|+|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~----g----~~~~~~~~~e---------~~~~aDvv 68 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE----G----ACGAAASARE---------FAGVVDAL 68 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----T----CSEEESSSTT---------TTTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc----C----CccccCCHHH---------HHhcCCEE
Confidence 35788899986 32 2334445565 899999999877765432 2 1111233211 12457988
Q ss_pred EeccchhhhcCCHHHHHHHH---HHHhccccCCcEEEEE
Q 025754 110 CCFQHLQMCFETEERARRLL---QNVSSLLKPGGYFLGI 145 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l---~~~~~~LkpgG~~i~~ 145 (248)
+..- .+....+.++ +.+...+++|.+++-.
T Consensus 69 i~~v------p~~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 69 VILV------VNAAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp EECC------SSHHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred EEEC------CCHHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 6633 3334455665 6677888888877654
No 450
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=73.93 E-value=13 Score=29.24 Aligned_cols=80 Identities=8% Similarity=-0.160 Sum_probs=46.8
Q ss_pred CCCeEEEEcCCCCccHhH----HHHcCCCeEEEEeC-ChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-hh---cc
Q 025754 31 PYVTVCDLYCGAGVDVDK----WETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-QM---QE 101 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~----l~~~~~~~v~giDi-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~ 101 (248)
++.+||=.|++ |+.... ++..+. +|++++. ++..++...+.....+ .++.++.+|+.+..-.. .+ ..
T Consensus 20 ~~k~vlItGas-ggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 20 AGKVALTTGAG-RGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45678877754 443333 334455 8999998 7776665554444322 24788999998743211 11 11
Q ss_pred cCCceeEEEeccc
Q 025754 102 KANQADLVCCFQH 114 (248)
Q Consensus 102 ~~~~fD~V~~~~~ 114 (248)
.-+..|+|+...+
T Consensus 96 ~~~~~d~vi~~Ag 108 (274)
T 1ja9_A 96 HFGGLDFVMSNSG 108 (274)
T ss_dssp HHSCEEEEECCCC
T ss_pred HcCCCCEEEECCC
Confidence 1247899887654
No 451
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=73.64 E-value=1.9 Score=35.70 Aligned_cols=97 Identities=12% Similarity=-0.079 Sum_probs=54.9
Q ss_pred cCCCC-eEEEEcC-C-CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCc
Q 025754 29 SHPYV-TVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (248)
Q Consensus 29 ~~~~~-~VLDlGc-G-~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (248)
+.++. +||-+|+ | .|..+..++...-.++++++.+++-++.+++. +. ...+..+-.+....... ..+.
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga---~~~i~~~~~~~~~~~~~--~~~~ 216 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL----GA---KEVLAREDVMAERIRPL--DKQR 216 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT----TC---SEEEECC---------C--CSCC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc----CC---cEEEecCCcHHHHHHHh--cCCc
Confidence 45664 8999997 4 36666666654334799999998888777542 11 01111110000000011 1346
Q ss_pred eeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
+|+|+....- ..++...+.|+++|.++..
T Consensus 217 ~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 217 WAAAVDPVGG-----------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEEEECSTT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred ccEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 9998754321 1355677889999998875
No 452
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=73.37 E-value=19 Score=28.31 Aligned_cols=81 Identities=12% Similarity=-0.029 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.++|=.|++.|- .+..++..+. +|+.+|.+++.++.+.+.....+ .++.++++|+.+..-.. ...+..
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35677777765541 2233444465 89999999998887766654322 35889999998743211 111123
Q ss_pred CceeEEEeccc
Q 025754 104 NQADLVCCFQH 114 (248)
Q Consensus 104 ~~fD~V~~~~~ 114 (248)
++.|+++...+
T Consensus 82 g~id~lv~nAg 92 (257)
T 3imf_A 82 GRIDILINNAA 92 (257)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899887654
No 453
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=73.30 E-value=20 Score=28.19 Aligned_cols=82 Identities=10% Similarity=-0.006 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
.+.++|=-|++.|- .+..++..+. +|+.+|.+++.++...+.....+ .++.++++|+.+..-... ..+..
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46778877766542 2233444466 89999999988877766655432 358899999987532111 11123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578998876644
No 454
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=73.23 E-value=26 Score=26.89 Aligned_cols=82 Identities=7% Similarity=-0.023 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhh----cccCC
Q 025754 32 YVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM----QEKAN 104 (248)
Q Consensus 32 ~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~ 104 (248)
+.+||=.|++.|- .+..++..+. +|+.++.+++.++...+...... ..++.++++|+.+..-...+ .+..+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 4567777765541 2233444465 89999999988877665543111 13488999999874321111 11124
Q ss_pred ceeEEEeccch
Q 025754 105 QADLVCCFQHL 115 (248)
Q Consensus 105 ~fD~V~~~~~l 115 (248)
+.|+++...+.
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 78998877654
No 455
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=72.79 E-value=2.2 Score=35.44 Aligned_cols=95 Identities=12% Similarity=-0.005 Sum_probs=55.5
Q ss_pred cCCCC-eEEEEcC-C-CCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEc-CCCCCchhhhhcccC
Q 025754 29 SHPYV-TVCDLYC-G-AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEKA 103 (248)
Q Consensus 29 ~~~~~-~VLDlGc-G-~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~ 103 (248)
+.++. +||=+|+ | -|..+..++.. +. ++++++.+++-++.+++. +.. ..+.. +....... .. ..
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l--Ga~-----~v~~~~~~~~~~~~-~~--~~ 215 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL--GAS-----EVISREDVYDGTLK-AL--SK 215 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH--TCS-----EEEEHHHHCSSCCC-SS--CC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc--CCc-----EEEECCCchHHHHH-Hh--hc
Confidence 44664 8999997 4 35555555554 55 799999998888777642 111 11111 10000000 00 13
Q ss_pred CceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..+|+|+.... . ..+....+.|++||.++..
T Consensus 216 ~~~d~vid~~g------~-----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 216 QQWQGAVDPVG------G-----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCEEEEEESCC------T-----HHHHHHHTTEEEEEEEEEC
T ss_pred CCccEEEECCc------H-----HHHHHHHHhhcCCCEEEEE
Confidence 46999865432 1 1466778899999998865
No 456
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=72.65 E-value=21 Score=28.31 Aligned_cols=81 Identities=5% Similarity=-0.102 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCCCccHh----HHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchh-hhh---ccc
Q 025754 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE-TQM---QEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~---~~~ 102 (248)
.+.+||=.|++.| ... .++..+. +|+.+|.++...+...+.....+ .++.++.+|+.+..-. ..+ ...
T Consensus 33 ~~k~vlITGasgg-IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 33 KGKVASVTGSSGG-IGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYG--VHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp TTCEEEETTTTSS-HHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHC--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcceEEEeecCCHHHHHHHHHHHHHH
Confidence 4567887776544 333 3334465 89999988776655444333222 2478899999874321 111 111
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+|+...+.
T Consensus 109 ~g~id~li~~Ag~ 121 (279)
T 3ctm_A 109 FGTIDVFVANAGV 121 (279)
T ss_dssp HSCCSEEEECGGG
T ss_pred hCCCCEEEECCcc
Confidence 2468998876654
No 457
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=72.47 E-value=13 Score=29.85 Aligned_cols=82 Identities=10% Similarity=-0.033 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.+||=-|++.|- .+..++..+. +|+.+|.+++.++.+.+.+...+ .++.++++|+.+..-.. ......
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888876641 2234444565 89999999988887766665432 35889999998743211 111123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 578998876543
No 458
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=72.32 E-value=37 Score=28.82 Aligned_cols=107 Identities=16% Similarity=0.035 Sum_probs=64.5
Q ss_pred HHHHHhcCCCCeEEEEcCCCCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhccc
Q 025754 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (248)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (248)
.|++....-+.+||.++-+-|..+..+. +..+++.+.-|...... ++.++. .+.. .+ +. ...
T Consensus 37 ~l~~~~~~~~~~~l~~n~~~g~~~~~~~--~~~~~~~~~~~~~~~~~----l~~~~~--~~~~--~~----~~----~~~ 98 (381)
T 3dmg_A 37 LLQKTVEPFGERALDLNPGVGWGSLPLE--GRMAVERLETSRAAFRC----LTASGL--QARL--AL----PW----EAA 98 (381)
T ss_dssp HHHTTCCCCSSEEEESSCTTSTTTGGGB--TTBEEEEEECBHHHHHH----HHHTTC--CCEE--CC----GG----GSC
T ss_pred HHHHHHHHhCCcEEEecCCCCccccccC--CCCceEEEeCcHHHHHH----HHHcCC--Cccc--cC----Cc----cCC
Confidence 4555554556799999999997555553 12367776545444332 333331 1211 11 11 113
Q ss_pred CCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecChh
Q 025754 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 150 (248)
+..||+|+...--+ ......+..+.++.+.|+|||.+++...+..
T Consensus 99 ~~~~d~v~~~~Pk~---k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~ 143 (381)
T 3dmg_A 99 AGAYDLVVLALPAG---RGTAYVQASLVAAARALRMGGRLYLAGDKNK 143 (381)
T ss_dssp TTCEEEEEEECCGG---GCHHHHHHHHHHHHHHEEEEEEEEEEEEGGG
T ss_pred cCCCCEEEEECCcc---hhHHHHHHHHHHHHHhCCCCCEEEEEEccHH
Confidence 57899997655322 1334578899999999999999998865543
No 459
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=72.23 E-value=3.2 Score=35.92 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=34.9
Q ss_pred CCeEEEEcCCCCccHhHHHHcC--CCe----EEEEeCChHHHHHHHHHHH
Q 025754 32 YVTVCDLYCGAGVDVDKWETAL--IAN----YIGIDVATSGIGEARDTWE 75 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~~l~~~~--~~~----v~giDis~~~l~~a~~~~~ 75 (248)
..+|+|+.||.|+....+...+ ..- |.++|+++.+++.-+..+.
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 3589999999999988887665 334 8899999999876665554
No 460
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=72.07 E-value=34 Score=26.94 Aligned_cols=113 Identities=11% Similarity=-0.001 Sum_probs=67.3
Q ss_pred CCCeEEEEcCCC--C--c-cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcc
Q 025754 31 PYVTVCDLYCGA--G--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQE 101 (248)
Q Consensus 31 ~~~~VLDlGcG~--G--~-~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~ 101 (248)
++.++|=-|.+. | . .+..++..+. +|+.+|.+++.++.+.+..+..+ ..++.++++|+.+..-.. ....
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 467788888533 3 2 2344555566 89999999999888777665432 124788999998743211 1112
Q ss_pred cCCceeEEEeccchhh---h-----cCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQM---C-----FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~---~-----~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
.-++.|+++.+..... . -...++.. .+.+.....++.+|.++.+
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVni 145 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVAT 145 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEE
Confidence 3468898877643211 0 01222222 1234456677889988776
No 461
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=72.03 E-value=36 Score=27.12 Aligned_cols=111 Identities=13% Similarity=-0.020 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCCccHh----HHHHcCCCeEEEEeCChHH-HHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcc
Q 025754 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSG-IGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQE 101 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~l~~~~~~~v~giDis~~~-l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~ 101 (248)
++.+||=.|++.| ... .++..+. +|+.++.++.. .+...+.....+ .++.++.+|+.+..-... ...
T Consensus 28 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 28 EGKVALVTGAGRG-IGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567777776554 333 3334455 89999988653 333333333222 247889999977432111 111
Q ss_pred cCCceeEEEeccchhhh----cCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 102 KANQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 102 ~~~~fD~V~~~~~l~~~----~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
..+..|+++...+.... -.+.++.+ .+++.+.+.|+.+|.++..
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 22578998876654211 01233332 2445666666777888776
No 462
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=72.01 E-value=23 Score=28.59 Aligned_cols=84 Identities=13% Similarity=-0.007 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCCCccHh----HHHHcCC--CeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hc
Q 025754 31 PYVTVCDLYCGAGVDVD----KWETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQ 100 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~l~~~~~--~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~ 100 (248)
.+.+||=.|++.| ... .++..+. ..|+.++.+.+.++.+.+.........++.++++|+.+..-... ..
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4678888887664 233 3333333 38999999999888777665543223458899999987543221 11
Q ss_pred ccCCceeEEEeccch
Q 025754 101 EKANQADLVCCFQHL 115 (248)
Q Consensus 101 ~~~~~fD~V~~~~~l 115 (248)
+.-++.|+++...+.
T Consensus 111 ~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 111 QEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGCSCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 123578999887653
No 463
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=71.96 E-value=30 Score=27.40 Aligned_cols=108 Identities=16% Similarity=0.050 Sum_probs=60.2
Q ss_pred CCCeEEEEcCCCCccH----hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYCGAGVDV----DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~----~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.+||=.|++.| .. ..++..+. +|+.+|.+++.++...+... .++.++++|+.+..-... ....
T Consensus 5 ~~k~vlITGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 5 SGKTILVTGAASG-IGRAALDLFAREGA-SLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567887776554 33 33344455 89999999877665543322 247889999987432111 1112
Q ss_pred CCceeEEEeccchhhh--c--CCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 103 ANQADLVCCFQHLQMC--F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 103 ~~~fD~V~~~~~l~~~--~--~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
.++.|+++...+.... + .+.++.+ .+++.+...++.+|.++..
T Consensus 78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 135 (263)
T 2a4k_A 78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 135 (263)
T ss_dssp HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3568998877654321 0 1122222 2344555555447877766
No 464
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=71.92 E-value=24 Score=27.71 Aligned_cols=79 Identities=14% Similarity=-0.046 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-hh---cccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-QM---QEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.+++.++...+.. . .++.++.+|+.+..-.. .+ .+..
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-~----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL-G----DAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT-G----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-C----CceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 35678877765541 1233344455 8999999987766544333 1 23788899997743211 11 1122
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++.....
T Consensus 78 g~iD~lv~nAg~ 89 (254)
T 1hdc_A 78 GSVDGLVNNAGI 89 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478998876543
No 465
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=71.72 E-value=29 Score=27.61 Aligned_cols=82 Identities=13% Similarity=0.003 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeC-------------ChHHHHHHHHHHHhcCCCceEEEEEcCCCCCc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDV-------------ATSGIGEARDTWENQRKNFIAEFFEADPCAEN 94 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDi-------------s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|. +++.++...+.....+ .++.++++|+.+..
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRDDA 90 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHH
Confidence 46778888876652 2234444565 8999998 5666666655554432 35889999998743
Q ss_pred hhhh----hcccCCceeEEEeccch
Q 025754 95 FETQ----MQEKANQADLVCCFQHL 115 (248)
Q Consensus 95 ~~~~----~~~~~~~fD~V~~~~~l 115 (248)
-... ..+..++.|+++...+.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2111 11123578998876544
No 466
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=71.66 E-value=13 Score=29.62 Aligned_cols=81 Identities=7% Similarity=-0.115 Sum_probs=51.1
Q ss_pred CCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccCC
Q 025754 32 YVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKAN 104 (248)
Q Consensus 32 ~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~ 104 (248)
+.+||=.|++.|- .+..++..+. +|+.+|.+++.++.+.+.+...+ .++.++.+|+.+..-... ..+..+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4567777766541 2233444465 89999999998887776665433 357889999987432111 111235
Q ss_pred ceeEEEeccch
Q 025754 105 QADLVCCFQHL 115 (248)
Q Consensus 105 ~fD~V~~~~~l 115 (248)
+.|+++...+.
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78988876543
No 467
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=70.92 E-value=15 Score=29.51 Aligned_cols=78 Identities=15% Similarity=-0.080 Sum_probs=49.6
Q ss_pred CCCeEEEEcCCCCccH----hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCce
Q 025754 31 PYVTVCDLYCGAGVDV----DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~----~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (248)
++.+||=.|++.| .. ..++..+. +|+.+|.++..++.+.+.. ..++.++++|+.+..-...+...-+..
T Consensus 15 ~gk~vlVTGas~g-IG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~i 87 (291)
T 3rd5_A 15 AQRTVVITGANSG-LGAVTARELARRGA-TVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGA 87 (291)
T ss_dssp TTCEEEEECCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence 4677887776654 33 33344455 8999999988776654433 235889999998754322222223578
Q ss_pred eEEEeccch
Q 025754 107 DLVCCFQHL 115 (248)
Q Consensus 107 D~V~~~~~l 115 (248)
|+++...+.
T Consensus 88 D~lv~nAg~ 96 (291)
T 3rd5_A 88 DVLINNAGI 96 (291)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCcC
Confidence 998876654
No 468
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=70.64 E-value=37 Score=26.75 Aligned_cols=112 Identities=10% Similarity=0.064 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCCCccHhH----HHHcCCCeEEEEeCChH---HHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----h
Q 025754 31 PYVTVCDLYCGAGVDVDK----WETALIANYIGIDVATS---GIGEARDTWENQRKNFIAEFFEADPCAENFETQ----M 99 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~----l~~~~~~~v~giDis~~---~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~ 99 (248)
.+.+||=-|++.| .... ++..+. +|+.++.+.. .++...+..... ..++.++++|+.+..-... .
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4677888887665 3333 333354 8888876543 344444444332 2458899999987432111 1
Q ss_pred cccCCceeEEEeccchhhh----cCCHHHHH-----------HHHHHHhccccCCcEEEEEe
Q 025754 100 QEKANQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (248)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~----~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~~ 146 (248)
....++.|+++...+.... -.+.++.+ .+++.+...|+++|.++...
T Consensus 86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 1123579998876543210 01233332 34556667777888887763
No 469
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=70.32 E-value=11 Score=31.76 Aligned_cols=96 Identities=13% Similarity=0.022 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCC--CCccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcc-cCCce
Q 025754 30 HPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (248)
Q Consensus 30 ~~~~~VLDlGcG--~G~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~f 106 (248)
.++.+||=+|++ .|..+..++.....+++++. +++-++.+++. +. ...+ |..+.++.+.+.+ ..+.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~~v~~~t~g~~ 232 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSR----GA---EEVF--DYRAPNLAQTIRTYTKNNL 232 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TC---SEEE--ETTSTTHHHHHHHHTTTCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHc----CC---cEEE--ECCCchHHHHHHHHccCCc
Confidence 678999999984 47666666665334888885 88777766542 21 1122 2222333322221 23459
Q ss_pred eEEEeccchhhhcCCHHHHHHHHHHHhccc-cCCcEEEEE
Q 025754 107 DLVCCFQHLQMCFETEERARRLLQNVSSLL-KPGGYFLGI 145 (248)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~~~~~L-kpgG~~i~~ 145 (248)
|+|+-.-. .. ..++.+.+.| ++||.++..
T Consensus 233 d~v~d~~g------~~----~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 233 RYALDCIT------NV----ESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp CEEEESSC------SH----HHHHHHHHHSCTTCEEEEES
T ss_pred cEEEECCC------ch----HHHHHHHHHhhcCCCEEEEE
Confidence 99875332 11 2455566677 699998865
No 470
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=70.25 E-value=12 Score=30.15 Aligned_cols=82 Identities=10% Similarity=-0.033 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.+++.++...+.....+ .++.++++|+.+..-... ..+.-
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56788888876541 2234444455 89999999988877766665433 347889999987542111 11123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 108 g~iD~lvnnAg~ 119 (276)
T 3r1i_A 108 GGIDIAVCNAGI 119 (276)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578998886644
No 471
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=70.11 E-value=17 Score=29.03 Aligned_cols=82 Identities=13% Similarity=0.035 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.++|=-|++.|- .+..++..+. +|+.+|.+++.++...+.+...+ .++.++++|+.+..-.. ......
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 56778877765541 2233444465 89999999988887766665433 34888999998743211 111234
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 102 g~iD~lv~nAg~ 113 (271)
T 4ibo_A 102 IDVDILVNNAGI 113 (271)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578998886654
No 472
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=69.71 E-value=25 Score=27.89 Aligned_cols=82 Identities=9% Similarity=-0.088 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCCccHh----HHHHcCCCeEEEEeCChHHHHHHHHHHHh-cCCCceEEEEEcCCCCCchhhh-h---ccc
Q 025754 32 YVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWEN-QRKNFIAEFFEADPCAENFETQ-M---QEK 102 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~----~l~~~~~~~v~giDis~~~l~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~-~---~~~ 102 (248)
+.+||=.|++.| ... .++..+. +|+.+|.+++.++...+.... .....++.++.+|+.+..-... + ...
T Consensus 6 ~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 6 EKVAIITGSSNG-IGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 456777775543 333 3344455 899999998877766554421 1111347889999987432111 1 112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.+..|+++...+.
T Consensus 84 ~g~id~lv~~Ag~ 96 (278)
T 1spx_A 84 FGKLDILVNNAGA 96 (278)
T ss_dssp HSCCCEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 2478988876654
No 473
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=69.65 E-value=6 Score=34.33 Aligned_cols=44 Identities=9% Similarity=-0.102 Sum_probs=32.1
Q ss_pred cCCCCeEEEEcC-CC-CccHhHHHHcCCCeEEEEeCChHHHHHHHH
Q 025754 29 SHPYVTVCDLYC-GA-GVDVDKWETALIANYIGIDVATSGIGEARD 72 (248)
Q Consensus 29 ~~~~~~VLDlGc-G~-G~~~~~l~~~~~~~v~giDis~~~l~~a~~ 72 (248)
+.++.+||=.|+ |. |..+..++.....++++++.+++-++.+++
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 458899999997 42 555566665544489999999888887754
No 474
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=69.20 E-value=28 Score=27.21 Aligned_cols=79 Identities=9% Similarity=-0.002 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCC---ccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
.+.++|=-|++.| ..+..++..+. +|+.+|.++..++...+.... +..++++|+.+..-... ..+..
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4667887776654 12234444465 899999999887776655433 26788999987432111 11123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 82 g~iD~lv~nAg~ 93 (248)
T 3op4_A 82 GGVDILVNNAGI 93 (248)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578998876554
No 475
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=69.02 E-value=24 Score=28.18 Aligned_cols=81 Identities=7% Similarity=-0.093 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCCCccH----hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhccc
Q 025754 31 PYVTVCDLYCGAGVDV----DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~----~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (248)
.+.+||=.|++.| .. ..++..+. +|+.+|.++..++...+.....+ .++.++.+|+.+..-.. .....
T Consensus 21 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 21 DSEVALVTGATSG-IGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp TSCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3567888886654 23 33344455 89999999887776655554322 24788999998743211 11112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
-+..|+++...+.
T Consensus 97 ~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 97 YGPVDVLVNNAGR 109 (277)
T ss_dssp TCSCSEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 3578998876543
No 476
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=68.99 E-value=7.4 Score=28.99 Aligned_cols=108 Identities=14% Similarity=0.032 Sum_probs=57.5
Q ss_pred cCCCCeEEEEcCCCCccHhHHHHc-CCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCcee
Q 025754 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (248)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (248)
......|||+|-|+|..-..+... +..+++.+|-.-.. ... .....-.++++|+.+.-- .....-..+.-
T Consensus 38 ~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~-------hp~-~~P~~e~~ilGdi~~tL~-~~~~r~g~~a~ 108 (174)
T 3iht_A 38 AGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS-------HPD-STPPEAQLILGDIRETLP-ATLERFGATAS 108 (174)
T ss_dssp TTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC-------CGG-GCCCGGGEEESCHHHHHH-HHHHHHCSCEE
T ss_pred cCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc-------CCC-CCCchHheecccHHHHHH-HHHHhcCCceE
Confidence 335567999999999877777655 55689999853211 000 001123466666533211 00000133445
Q ss_pred EEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
++.+-...++--.+......+-.-+..+|.|||+++-.
T Consensus 109 LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 109 LVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred EEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 55555544441111112333445677899999999864
No 477
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=68.81 E-value=21 Score=28.97 Aligned_cols=83 Identities=10% Similarity=-0.046 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.++..++.+.+.+...+ ..++.++++|+.+..-.. ...+..
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 45677877765541 2233444565 89999999988877766654432 135889999998743211 111123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++...+.
T Consensus 118 g~iD~lvnnAg~ 129 (293)
T 3rih_A 118 GALDVVCANAGI 129 (293)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578998876654
No 478
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=68.48 E-value=4.5 Score=40.46 Aligned_cols=44 Identities=18% Similarity=0.219 Sum_probs=36.3
Q ss_pred CCCeEEEEcCCCCccHhHHHHcCC-CeEEEEeCChHHHHHHHHHH
Q 025754 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTW 74 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~~-~~v~giDis~~~l~~a~~~~ 74 (248)
+..+++||-||.|++...+..++. ..+.++|+++.+++.-+..+
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 456899999999999999988886 46889999999887655443
No 479
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=68.16 E-value=22 Score=28.86 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=54.0
Q ss_pred CeEEEEcCCC-Cc-cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEEE
Q 025754 33 VTVCDLYCGA-GV-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (248)
Q Consensus 33 ~~VLDlGcG~-G~-~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (248)
.+|.=||+|. |. .+..++..+. +|++.|.+++.++...+. + +.. .. ++.+. .. .|+|+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~----g----~~~-~~-----~~~~~----~~-aDvvi 75 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA----G----ATL-AD-----SVADV----AA-ADLIH 75 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT----T----CEE-CS-----SHHHH----TT-SSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC----C----CEE-cC-----CHHHH----Hh-CCEEE
Confidence 5788899987 32 2233334455 899999999877665432 2 211 11 12211 23 79886
Q ss_pred eccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..- .+....+.+++.+...+++|.+++-.
T Consensus 76 ~~v------p~~~~~~~v~~~l~~~l~~g~ivv~~ 104 (296)
T 3qha_A 76 ITV------LDDAQVREVVGELAGHAKPGTVIAIH 104 (296)
T ss_dssp ECC------SSHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred EEC------CChHHHHHHHHHHHHhcCCCCEEEEe
Confidence 533 33455777889999999998877655
No 480
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=68.11 E-value=25 Score=27.80 Aligned_cols=109 Identities=12% Similarity=0.020 Sum_probs=60.8
Q ss_pred CCCeEEEEcC-CCCccHhHH----HHcCCCeEEEEeCChHH-HHHHHHHHHhcCCCceEEEEEcCCCCCchhhh-h---c
Q 025754 31 PYVTVCDLYC-GAGVDVDKW----ETALIANYIGIDVATSG-IGEARDTWENQRKNFIAEFFEADPCAENFETQ-M---Q 100 (248)
Q Consensus 31 ~~~~VLDlGc-G~G~~~~~l----~~~~~~~v~giDis~~~-l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~---~ 100 (248)
.+.+||=.|+ |+|+....+ +..+. +|+.+|.++.. ++...+.. ..++.++++|+.+..-... + .
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL-----PAKAPLLELDVQNEEHLASLAGRVT 79 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS-----SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhc-----CCCceEEEccCCCHHHHHHHHHHHH
Confidence 3567888887 355544443 33455 89999988754 23332211 1246788999987432111 1 1
Q ss_pred ccCC---ceeEEEeccchhh---------hcCCHHHHH-----------HHHHHHhccccCCcEEEEE
Q 025754 101 EKAN---QADLVCCFQHLQM---------CFETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 101 ~~~~---~fD~V~~~~~l~~---------~~~~~~~~~-----------~~l~~~~~~LkpgG~~i~~ 145 (248)
...+ +.|+++...+... .-.+.++.+ .+++.+...|+++|.++..
T Consensus 80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 147 (269)
T 2h7i_A 80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGM 147 (269)
T ss_dssp HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEE
Confidence 1123 7999887654321 012333333 3455666777777887766
No 481
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=68.05 E-value=42 Score=26.34 Aligned_cols=81 Identities=9% Similarity=-0.028 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCCCccH----hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhccc
Q 025754 31 PYVTVCDLYCGAGVDV----DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~----~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (248)
.+.+||=.|++.| .. ..++..+. +|+.+|.+++.++...+.....+ .++.++.+|+.+..-.. .....
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 6 NGKVCLVTGAGGN-IGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3567887776654 33 33344455 89999999887776655554332 34788999998743211 11112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.+..|+++...+.
T Consensus 82 ~g~id~lv~nAg~ 94 (262)
T 1zem_A 82 FGKIDFLFNNAGY 94 (262)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 3578998876543
No 482
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=68.03 E-value=37 Score=27.00 Aligned_cols=82 Identities=9% Similarity=-0.079 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (248)
.+.++|=.|++.|- .+..++..+. +|+.+|.+...++.+.+...... ..++.++++|+.+..-.. .....-
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888876642 1233344455 89999999887776655543211 124889999998753211 111123
Q ss_pred CceeEEEeccc
Q 025754 104 NQADLVCCFQH 114 (248)
Q Consensus 104 ~~fD~V~~~~~ 114 (248)
++.|+++...+
T Consensus 104 g~id~lv~nAg 114 (277)
T 4fc7_A 104 GRIDILINCAA 114 (277)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57899887664
No 483
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=67.88 E-value=17 Score=29.04 Aligned_cols=82 Identities=11% Similarity=-0.089 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeC-ChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hccc
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDi-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (248)
.+.+||=-|++.|- .+..++..+. +|+.++. ++..++...+.....+ .++.++++|+.+..-... ..+.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAG--GEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56778877766541 2233444465 8888888 6666665555544332 348889999987432111 1112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+++...+.
T Consensus 104 ~g~id~lv~nAg~ 116 (269)
T 4dmm_A 104 WGRLDVLVNNAGI 116 (269)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 3578998876544
No 484
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=67.84 E-value=22 Score=27.91 Aligned_cols=81 Identities=9% Similarity=0.034 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCCccH----hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-hh---ccc
Q 025754 31 PYVTVCDLYCGAGVDV----DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-QM---QEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~----~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~~ 102 (248)
.+.+||=.|++.| .. ..++..+. +|+.+|.++..++...+.....+ .++.++.+|+.+..-.. .+ ...
T Consensus 8 ~~k~vlVTGas~g-iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4667887776544 33 33344455 89999999887776555544322 35788999998743211 11 111
Q ss_pred C-CceeEEEeccch
Q 025754 103 A-NQADLVCCFQHL 115 (248)
Q Consensus 103 ~-~~fD~V~~~~~l 115 (248)
- +..|+++...+.
T Consensus 84 ~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 84 FHGKLNILVNNAGI 97 (260)
T ss_dssp TTTCCCEEEECCCC
T ss_pred cCCCCCEEEECCCC
Confidence 2 679998876653
No 485
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=67.83 E-value=3.5 Score=33.53 Aligned_cols=45 Identities=27% Similarity=0.258 Sum_probs=31.4
Q ss_pred CCceeEEEeccch----hhh---cCCHHHHHHHHHHHhccccCCcEEEEEec
Q 025754 103 ANQADLVCCFQHL----QMC---FETEERARRLLQNVSSLLKPGGYFLGITP 147 (248)
Q Consensus 103 ~~~fD~V~~~~~l----~~~---~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 147 (248)
-++||+|++.... |++ -++.-.+..+-.....+|+|||.+++..-
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aY 260 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAY 260 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEEC
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEee
Confidence 4899999986532 221 22233456777888999999999998833
No 486
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=67.78 E-value=40 Score=26.75 Aligned_cols=82 Identities=10% Similarity=-0.085 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCC------------hHHHHHHHHHHHhcCCCceEEEEEcCCCCCch
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
.+.++|=-|++.|- .+..++..+. +|+.+|.+ .+.++...+.....+ .++.++++|+.+..-
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKDRAA 85 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 46778888876642 2234444465 89999986 455555444443332 358899999987432
Q ss_pred hhh----hcccCCceeEEEeccch
Q 025754 96 ETQ----MQEKANQADLVCCFQHL 115 (248)
Q Consensus 96 ~~~----~~~~~~~fD~V~~~~~l 115 (248)
... ..+.-++.|+++...+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 111 11123578998876654
No 487
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=67.75 E-value=13 Score=25.97 Aligned_cols=100 Identities=11% Similarity=0.002 Sum_probs=50.8
Q ss_pred CCeEEEEcCCC-CccHhH-HHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 32 YVTVCDLYCGA-GVDVDK-WETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~~~-l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
+.+|+=+|+|. |..+.. +...+. +++.+|.++..++.++ ..+ ...+.+|..+....... ....+|+|
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~----~~~----~~~~~~d~~~~~~l~~~--~~~~~d~v 74 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYA----SYA----THAVIANATEENELLSL--GIRNFEYV 74 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTT----TTC----SEEEECCTTCHHHHHTT--TGGGCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH----HhC----CEEEEeCCCCHHHHHhc--CCCCCCEE
Confidence 45789999864 333222 223354 7999999876554332 112 34577787553211110 12468988
Q ss_pred EeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEEecCh
Q 025754 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (248)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~ 149 (248)
+..... +.+ ....+....+.+.+. .++....+.
T Consensus 75 i~~~~~-----~~~-~~~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 75 IVAIGA-----NIQ-ASTLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp EECCCS-----CHH-HHHHHHHHHHHTTCS-EEEEECCSH
T ss_pred EECCCC-----chH-HHHHHHHHHHHcCCC-eEEEEeCCH
Confidence 764421 111 222333344445665 655554443
No 488
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=67.51 E-value=5 Score=33.02 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=27.2
Q ss_pred CCCeEEEEcCCCCccHhHHHHcC-----CCeEEEEeCChH
Q 025754 31 PYVTVCDLYCGAGVDVDKWETAL-----IANYIGIDVATS 65 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~l~~~~-----~~~v~giDis~~ 65 (248)
.+..|+=+|||.|.++..++..- .-+.+.+|.++.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 46799999999999998887641 137888888654
No 489
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=67.48 E-value=24 Score=23.41 Aligned_cols=72 Identities=13% Similarity=0.013 Sum_probs=43.2
Q ss_pred CCeEEEEcCCC-CccH-hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhhhcccCCceeEE
Q 025754 32 YVTVCDLYCGA-GVDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (248)
Q Consensus 32 ~~~VLDlGcG~-G~~~-~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (248)
+.+|+=+|+|. |..+ ..+...+..+++++|.++..++... ..+ +.+...|+.+..-... .-..+|+|
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~----~~~~~~d~~~~~~~~~---~~~~~d~v 73 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMG----VATKQVDAKDEAGLAK---ALGGFDAV 73 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTT----CEEEECCTTCHHHHHH---HTTTCSEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCC----CcEEEecCCCHHHHHH---HHcCCCEE
Confidence 46799999853 3222 2333445348999999988766544 222 6678888866322111 12468988
Q ss_pred Eeccc
Q 025754 110 CCFQH 114 (248)
Q Consensus 110 ~~~~~ 114 (248)
+....
T Consensus 74 i~~~~ 78 (118)
T 3ic5_A 74 ISAAP 78 (118)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 76553
No 490
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=67.42 E-value=37 Score=26.99 Aligned_cols=83 Identities=13% Similarity=-0.040 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCCCccH----hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCC-CceEEEEEcCCCCCchhhh----hcc
Q 025754 31 PYVTVCDLYCGAGVDV----DKWETALIANYIGIDVATSGIGEARDTWENQRK-NFIAEFFEADPCAENFETQ----MQE 101 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~----~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~~~----~~~ 101 (248)
.+.+||=.|++.| .. ..++..+. +|+.+|.+++.++...+.....+. ..++.++.+|+.+..-... ..+
T Consensus 5 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 5 SNKTVIITGSSNG-IGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 3566777775544 33 33344455 899999999887766555443221 1148889999987432111 111
Q ss_pred cCCceeEEEeccch
Q 025754 102 KANQADLVCCFQHL 115 (248)
Q Consensus 102 ~~~~fD~V~~~~~l 115 (248)
..++.|+++...+.
T Consensus 83 ~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 83 QFGKIDVLVNNAGA 96 (280)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 23578998876643
No 491
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=67.32 E-value=35 Score=26.40 Aligned_cols=78 Identities=10% Similarity=-0.120 Sum_probs=48.8
Q ss_pred CCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhcccCC
Q 025754 32 YVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (248)
Q Consensus 32 ~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~ 104 (248)
+.+||=.|++.|- .+..++..+. +|+.+|.+++.++...+.... ++.++++|+.+..-.. ...+..+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGN-----AVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcC-----CceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4567777766541 1233444465 899999999888776665522 3889999998743211 1111235
Q ss_pred ceeEEEeccch
Q 025754 105 QADLVCCFQHL 115 (248)
Q Consensus 105 ~fD~V~~~~~l 115 (248)
..|+++...+.
T Consensus 77 ~id~lvnnAg~ 87 (235)
T 3l6e_A 77 LPELVLHCAGT 87 (235)
T ss_dssp SCSEEEEECCC
T ss_pred CCcEEEECCCC
Confidence 78988876544
No 492
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=67.13 E-value=28 Score=27.60 Aligned_cols=81 Identities=10% Similarity=0.010 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCCCccHhH----HHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-h---hccc
Q 025754 31 PYVTVCDLYCGAGVDVDK----WETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-Q---MQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~----l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~---~~~~ 102 (248)
.+.+||=.|++.| .... ++..+. +|+++|.++..++...+.....+ .++.++.+|+.+..-.. . ....
T Consensus 30 ~~k~vlITGasgg-IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 30 TGEIVLITGAGHG-IGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 4677888876543 3333 334455 89999999887776655554332 24889999998743211 1 1112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.+..|+|+...+.
T Consensus 106 ~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 106 IGDVSILVNNAGV 118 (272)
T ss_dssp TCCCSEEEECCCC
T ss_pred CCCCcEEEECCCc
Confidence 3578998876643
No 493
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=66.83 E-value=32 Score=26.89 Aligned_cols=79 Identities=13% Similarity=0.020 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhhh----hcccC
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (248)
.+.+||=.|++.|- .+..++..+. +|+.+|.++..++...+... .++.++++|+.+..-... ..+..
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIG-----DAALAVAADISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 46778888877651 2334444565 89999999988776655442 237889999987432111 11123
Q ss_pred CceeEEEeccch
Q 025754 104 NQADLVCCFQHL 115 (248)
Q Consensus 104 ~~fD~V~~~~~l 115 (248)
++.|+++.....
T Consensus 82 g~id~li~~Ag~ 93 (261)
T 3n74_A 82 GKVDILVNNAGI 93 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 478988876543
No 494
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=66.70 E-value=34 Score=27.12 Aligned_cols=78 Identities=12% Similarity=0.023 Sum_probs=43.8
Q ss_pred CCCeEEEEcCCC-CccH-hHHHHcCCCeEEEEeCCh-------------------HHHHHHHHHHHhcCCCceEEEEEcC
Q 025754 31 PYVTVCDLYCGA-GVDV-DKWETALIANYIGIDVAT-------------------SGIGEARDTWENQRKNFIAEFFEAD 89 (248)
Q Consensus 31 ~~~~VLDlGcG~-G~~~-~~l~~~~~~~v~giDis~-------------------~~l~~a~~~~~~~~~~~~~~~~~~d 89 (248)
.+.+||=+|||. |..+ ..++..+.++++-+|.+. .-.+.+.+++...+...++..+...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 106 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR 106 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence 368999999984 5433 345556888999998653 2233444455443333345555444
Q ss_pred CCCCchhhhhcccCCceeEEEec
Q 025754 90 PCAENFETQMQEKANQADLVCCF 112 (248)
Q Consensus 90 ~~~~~~~~~~~~~~~~fD~V~~~ 112 (248)
+........ -..+|+|+..
T Consensus 107 ~~~~~~~~~----~~~~DvVi~~ 125 (251)
T 1zud_1 107 LTGEALKDA----VARADVVLDC 125 (251)
T ss_dssp CCHHHHHHH----HHHCSEEEEC
T ss_pred CCHHHHHHH----HhcCCEEEEC
Confidence 432222211 1358999753
No 495
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=66.60 E-value=30 Score=27.84 Aligned_cols=96 Identities=15% Similarity=0.134 Sum_probs=53.4
Q ss_pred CeEEEEcCCC-CccH-hHHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEE------cCCCCCchhhhhcccCC
Q 025754 33 VTVCDLYCGA-GVDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFE------ADPCAENFETQMQEKAN 104 (248)
Q Consensus 33 ~~VLDlGcG~-G~~~-~~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~------~d~~~~~~~~~~~~~~~ 104 (248)
.+|.=||+|. |..+ ..+...+. +|+.+|.+++.++..++. + +.... ..+...... .....-.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~----g----~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 73 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN----G----LIADFNGEEVVANLPIFSPE-EIDHQNE 73 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH----C----EEEEETTEEEEECCCEECGG-GCCTTSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC----C----EEEEeCCCeeEecceeecch-hhcccCC
Confidence 4788899986 3322 33444455 899999998877665443 1 11111 111000000 0000012
Q ss_pred ceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEEE
Q 025754 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (248)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 145 (248)
..|+|+..- .......+++.+...++++..++..
T Consensus 74 ~~d~vi~~v-------~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 74 QVDLIIALT-------KAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CCSEEEECS-------CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCCEEEEEe-------ccccHHHHHHHHHHhcCCCCEEEEe
Confidence 689886543 2345678888999999888766544
No 496
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=66.32 E-value=35 Score=27.88 Aligned_cols=82 Identities=11% Similarity=-0.038 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCCCc---cHhHHHHcCCCeEEEEeCC------------hHHHHHHHHHHHhcCCCceEEEEEcCCCCCch
Q 025754 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (248)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~l~~~~~~~v~giDis------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (248)
.+.+||=-|++.|- .+..++..+. +|+.+|.+ ++.++...+.....+ .++.++++|+.+..-
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRIIARQADVRDLAS 121 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHH
Confidence 46678877776542 2233444455 89999986 555555544443332 358899999987432
Q ss_pred hhh----hcccCCceeEEEeccch
Q 025754 96 ETQ----MQEKANQADLVCCFQHL 115 (248)
Q Consensus 96 ~~~----~~~~~~~fD~V~~~~~l 115 (248)
... .....++.|+++...+.
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 111 11123578998886654
No 497
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=66.14 E-value=41 Score=29.34 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=57.1
Q ss_pred CeEEEEcCCC-Cc-cHhHHHHcCCCeEEEEeCChHHHHHHHHHHHh-------cCC-------CceEEEEEcCCCCCchh
Q 025754 33 VTVCDLYCGA-GV-DVDKWETALIANYIGIDVATSGIGEARDTWEN-------QRK-------NFIAEFFEADPCAENFE 96 (248)
Q Consensus 33 ~~VLDlGcG~-G~-~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~-------~~~-------~~~~~~~~~d~~~~~~~ 96 (248)
.+|.=||+|. |. .+..++..+. .|+++|.+++.++.+.+.... .+. .....+ ..|. .
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-----~ 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-----K 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-----G
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-----H
Confidence 5799999997 32 3344444455 899999999998877653321 000 000111 2222 1
Q ss_pred hhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEEE
Q 025754 97 TQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLG 144 (248)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 144 (248)
.-...|+|+..- .+..+....+++++...++|+.+++.
T Consensus 111 -----~~~~aDlVIeaV-----pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 111 -----ELSTVDLVVEAV-----FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -----GGTTCSEEEECC-----CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -----HHCCCCEEEEcC-----CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 123578886533 23444567788889889988877654
No 498
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=65.96 E-value=49 Score=26.38 Aligned_cols=82 Identities=7% Similarity=-0.068 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCCccHh----HHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh----hhccc
Q 025754 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (248)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (248)
.+.+||=.|++.| ... .++..+. +|+++|.++..++...+...... ..++.++++|+.+..-.. .....
T Consensus 25 ~~k~vlITGasgg-iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 25 QGKVAFITGGGTG-LGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3567888876543 333 3334455 89999999887766555443220 124889999998743211 11112
Q ss_pred CCceeEEEeccch
Q 025754 103 ANQADLVCCFQHL 115 (248)
Q Consensus 103 ~~~fD~V~~~~~l 115 (248)
.++.|+|+...+.
T Consensus 102 ~g~id~li~~Ag~ 114 (302)
T 1w6u_A 102 AGHPNIVINNAAG 114 (302)
T ss_dssp TCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 4578998876653
No 499
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=65.78 E-value=27 Score=27.43 Aligned_cols=78 Identities=6% Similarity=-0.153 Sum_probs=48.0
Q ss_pred CCeEEEEcCCCCccHh----HHHHcCCCeEEEEeCChHHHHHHHHHHHhcCCCceEEEEEcCCCCCchhh-hhc---cc-
Q 025754 32 YVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-QMQ---EK- 102 (248)
Q Consensus 32 ~~~VLDlGcG~G~~~~----~l~~~~~~~v~giDis~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~---~~- 102 (248)
+.++|=.|++.| ... .++..+. +|+.+|.++..++...+.....+ .++.++.+|+.+..-.. .+. ..
T Consensus 5 ~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 5 GQVCVVTGASRG-IGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLG--GQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHS--SEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcC--CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 556777775543 333 3334455 89999999887776655544322 25788999998743211 111 11
Q ss_pred CCceeEEEecc
Q 025754 103 ANQADLVCCFQ 113 (248)
Q Consensus 103 ~~~fD~V~~~~ 113 (248)
.++.|+++...
T Consensus 81 ~g~id~lvnnA 91 (260)
T 2qq5_A 81 QGRLDVLVNNA 91 (260)
T ss_dssp TTCCCEEEECC
T ss_pred CCCceEEEECC
Confidence 46789988776
No 500
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=65.75 E-value=7.1 Score=31.63 Aligned_cols=95 Identities=18% Similarity=0.145 Sum_probs=57.0
Q ss_pred CeEEEEcCCC-C-ccHhHHHHcCCCeEEEEeCChHHHHHHHHHHHhc---------CCC--------ceEEEEEcCCCCC
Q 025754 33 VTVCDLYCGA-G-VDVDKWETALIANYIGIDVATSGIGEARDTWENQ---------RKN--------FIAEFFEADPCAE 93 (248)
Q Consensus 33 ~~VLDlGcG~-G-~~~~~l~~~~~~~v~giDis~~~l~~a~~~~~~~---------~~~--------~~~~~~~~d~~~~ 93 (248)
.+|.=||+|+ | ..+..++..+. +|+..|.+++.++.+.+..... +.. .++.. ..|
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~---- 78 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDD---- 78 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCC----
Confidence 4677789886 2 22344445566 8999999999998877653211 000 00111 111
Q ss_pred chhhhhcccCCceeEEEeccchhhhcCCHHHHHHHHHHHhccccCCcEEE
Q 025754 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (248)
Q Consensus 94 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~~i 143 (248)
+.+ .-...|+|+..- .++.+....+++++...++|+.+++
T Consensus 79 -~~~----~~~~aDlVi~av-----~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 79 -LAQ----AVKDADLVIEAV-----PESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp -HHH----HTTTCSEEEECC-----CSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -HHH----HhccCCEEEEec-----cCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 111 124578886533 2445567788899999999988765
Done!